Query 019125
Match_columns 346
No_of_seqs 317 out of 2111
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 06:53:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019125.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019125hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 3.8E-83 8.2E-88 580.2 18.2 286 5-299 2-288 (303)
2 KOG0374 Serine/threonine speci 100.0 7.1E-82 1.5E-86 609.0 26.9 296 2-297 5-304 (331)
3 PTZ00480 serine/threonine-prot 100.0 1.1E-78 2.3E-83 585.0 30.9 299 3-301 8-306 (320)
4 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 2.8E-77 6.1E-82 571.2 29.6 291 6-296 2-292 (293)
5 PTZ00244 serine/threonine-prot 100.0 3.5E-77 7.7E-82 570.2 29.2 292 4-295 2-293 (294)
6 cd07420 MPP_RdgC Drosophila me 100.0 5E-76 1.1E-80 567.1 31.2 283 2-293 3-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 8.4E-76 1.8E-80 559.0 29.1 283 6-297 2-285 (285)
8 PTZ00239 serine/threonine prot 100.0 4.4E-75 9.6E-80 557.6 29.7 286 5-299 2-289 (303)
9 smart00156 PP2Ac Protein phosp 100.0 1.7E-73 3.7E-78 540.3 29.5 270 27-296 1-270 (271)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.2E-73 2.5E-78 551.0 28.2 288 2-298 12-306 (316)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 2.4E-73 5.2E-78 547.1 30.2 285 5-298 2-299 (305)
12 KOG0373 Serine/threonine speci 100.0 1.1E-74 2.4E-79 518.0 18.6 290 1-299 1-292 (306)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.3E-72 2.8E-77 543.7 28.3 287 9-295 1-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 2E-68 4.2E-73 522.0 31.2 293 2-295 8-365 (377)
15 KOG0371 Serine/threonine prote 100.0 2.2E-67 4.8E-72 480.1 14.7 284 6-298 20-304 (319)
16 KOG0375 Serine-threonine phosp 100.0 8E-67 1.7E-71 494.1 13.8 271 26-297 60-343 (517)
17 KOG0377 Protein serine/threoni 100.0 1.4E-57 3.1E-62 439.7 14.1 317 4-341 119-465 (631)
18 KOG0376 Serine-threonine phosp 100.0 7.2E-51 1.6E-55 400.4 12.9 273 26-299 182-461 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.1E-36 2.3E-41 278.8 20.1 214 57-281 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 7.6E-26 1.7E-30 211.7 17.3 121 54-176 1-145 (245)
21 cd07425 MPP_Shelphs Shewanella 99.9 6E-26 1.3E-30 207.6 15.5 176 57-267 1-197 (208)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 6.7E-24 1.4E-28 195.9 16.2 115 57-174 2-143 (222)
23 cd07423 MPP_PrpE Bacillus subt 99.9 1.2E-23 2.6E-28 195.3 17.5 120 54-176 1-142 (234)
24 PRK00166 apaH diadenosine tetr 99.9 1.8E-23 3.9E-28 198.7 18.7 217 54-285 1-261 (275)
25 cd07422 MPP_ApaH Escherichia c 99.9 4.8E-24 1E-28 200.7 12.7 155 56-219 1-167 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 1.6E-23 3.5E-28 198.2 13.0 127 54-185 1-134 (279)
27 PRK11439 pphA serine/threonine 99.9 1.3E-22 2.8E-27 186.6 12.3 177 54-269 17-208 (218)
28 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1.1E-21 2.3E-26 178.9 16.3 169 54-253 1-184 (207)
29 PHA02239 putative protein phos 99.9 6.5E-22 1.4E-26 184.2 14.8 172 54-267 1-219 (235)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 4.5E-21 9.7E-26 182.2 16.4 74 55-128 3-83 (304)
31 PRK09968 serine/threonine-spec 99.8 2.4E-20 5.1E-25 171.8 12.2 115 54-174 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.4 1.3E-12 2.9E-17 109.0 11.6 159 54-248 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.2 4E-10 8.7E-15 97.3 15.8 83 55-174 1-86 (155)
34 PF12850 Metallophos_2: Calcin 99.2 4E-10 8.7E-15 96.4 13.3 152 54-283 1-152 (156)
35 COG0639 ApaH Diadenosine tetra 99.2 3.5E-11 7.5E-16 100.8 6.5 144 127-271 3-155 (155)
36 TIGR00040 yfcE phosphoesterase 99.1 3.9E-09 8.4E-14 91.9 15.1 63 54-125 1-64 (158)
37 PRK09453 phosphodiesterase; Pr 99.1 4.7E-10 1E-14 100.1 9.1 69 54-126 1-77 (182)
38 cd07379 MPP_239FB Homo sapiens 98.9 6.6E-09 1.4E-13 88.1 10.3 118 55-253 1-120 (135)
39 cd07388 MPP_Tt1561 Thermus the 98.8 6.3E-08 1.4E-12 89.8 14.1 71 54-125 5-75 (224)
40 cd00838 MPP_superfamily metall 98.8 6.2E-08 1.4E-12 78.7 11.1 118 57-254 1-120 (131)
41 cd07397 MPP_DevT Myxococcus xa 98.8 4.1E-08 9E-13 91.7 11.0 156 55-249 2-208 (238)
42 cd07394 MPP_Vps29 Homo sapiens 98.7 1.6E-06 3.5E-11 77.5 17.1 125 55-266 1-134 (178)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.6 3.3E-07 7.1E-12 80.7 11.4 65 56-126 1-66 (188)
44 cd07404 MPP_MS158 Microscilla 98.6 3.2E-07 6.9E-12 80.2 9.6 67 56-125 1-68 (166)
45 PRK05340 UDP-2,3-diacylglucosa 98.6 1.9E-06 4.1E-11 80.4 15.1 207 54-286 1-232 (241)
46 cd07403 MPP_TTHA0053 Thermus t 98.5 1.7E-06 3.7E-11 73.2 11.6 107 57-253 1-107 (129)
47 TIGR01854 lipid_A_lpxH UDP-2,3 98.4 2.9E-06 6.2E-11 78.7 12.0 206 56-286 1-230 (231)
48 cd07400 MPP_YydB Bacillus subt 98.4 7.1E-06 1.5E-10 69.7 13.1 118 56-254 1-130 (144)
49 COG0622 Predicted phosphoester 98.2 7.6E-05 1.6E-09 66.6 15.3 160 54-295 2-165 (172)
50 cd07399 MPP_YvnB Bacillus subt 98.2 0.00015 3.2E-09 66.6 16.9 70 55-124 2-81 (214)
51 PRK11148 cyclic 3',5'-adenosin 98.1 0.00015 3.2E-09 68.9 16.1 71 53-125 14-98 (275)
52 PRK11340 phosphodiesterase Yae 98.1 8.3E-06 1.8E-10 77.5 7.3 70 54-125 50-125 (271)
53 cd07385 MPP_YkuE_C Bacillus su 98.0 1.1E-05 2.3E-10 73.5 6.6 71 54-126 2-77 (223)
54 cd07383 MPP_Dcr2 Saccharomyces 97.9 0.00033 7.2E-09 63.1 14.8 70 54-123 3-87 (199)
55 cd07395 MPP_CSTP1 Homo sapiens 97.9 0.0005 1.1E-08 64.5 16.3 71 55-125 6-99 (262)
56 TIGR03729 acc_ester putative p 97.8 3.6E-05 7.8E-10 71.5 6.7 68 55-125 1-74 (239)
57 KOG0376 Serine-threonine phosp 97.8 2.5E-06 5.5E-11 85.7 -1.8 235 25-271 13-299 (476)
58 TIGR00619 sbcd exonuclease Sbc 97.7 8E-05 1.7E-09 70.2 7.4 72 54-125 1-88 (253)
59 cd07396 MPP_Nbla03831 Homo sap 97.7 0.00012 2.7E-09 69.1 7.8 73 55-127 2-88 (267)
60 PHA02546 47 endonuclease subun 97.7 8.8E-05 1.9E-09 72.9 6.8 73 54-126 1-90 (340)
61 COG1409 Icc Predicted phosphoh 97.6 0.0016 3.5E-08 60.8 14.7 73 54-128 1-81 (301)
62 cd07390 MPP_AQ1575 Aquifex aeo 97.6 0.00023 5E-09 62.7 7.8 67 56-127 1-84 (168)
63 cd07398 MPP_YbbF-LpxH Escheric 97.5 0.00021 4.5E-09 64.7 7.0 29 225-253 177-205 (217)
64 cd07402 MPP_GpdQ Enterobacter 97.5 0.00033 7.1E-09 64.4 8.0 69 55-125 1-83 (240)
65 cd07391 MPP_PF1019 Pyrococcus 97.5 0.00033 7.1E-09 61.9 7.5 58 69-126 30-89 (172)
66 PRK04036 DNA polymerase II sma 97.5 0.00062 1.3E-08 70.4 10.1 114 53-173 243-388 (504)
67 cd00840 MPP_Mre11_N Mre11 nucl 97.4 0.00034 7.5E-09 63.2 6.9 74 55-128 1-92 (223)
68 COG2129 Predicted phosphoester 97.4 0.017 3.6E-07 53.5 17.8 204 53-285 3-217 (226)
69 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.4 0.00032 7E-09 66.6 6.6 70 56-125 1-86 (262)
70 COG2908 Uncharacterized protei 97.4 0.0017 3.7E-08 60.5 10.8 198 58-288 2-230 (237)
71 cd08165 MPP_MPPE1 human MPPE1 97.4 0.0016 3.4E-08 57.0 10.1 47 80-126 38-90 (156)
72 PRK10966 exonuclease subunit S 97.4 0.00044 9.5E-09 69.7 7.5 72 54-126 1-88 (407)
73 PF06874 FBPase_2: Firmicute f 97.3 0.0012 2.7E-08 68.7 9.9 70 225-296 507-586 (640)
74 TIGR00024 SbcD_rel_arch putati 97.3 0.00094 2E-08 62.0 7.7 72 54-126 15-103 (225)
75 TIGR00583 mre11 DNA repair pro 97.2 0.0011 2.3E-08 66.9 8.1 73 54-126 4-124 (405)
76 cd00839 MPP_PAPs purple acid p 97.1 0.0013 2.8E-08 62.4 7.4 70 54-127 5-83 (294)
77 cd07393 MPP_DR1119 Deinococcus 96.9 0.002 4.4E-08 59.7 6.5 46 224-271 180-228 (232)
78 cd07401 MPP_TMEM62_N Homo sapi 96.8 0.0027 5.9E-08 59.8 6.5 71 56-126 2-90 (256)
79 COG1408 Predicted phosphohydro 96.7 0.011 2.4E-07 56.8 10.3 72 54-127 45-120 (284)
80 cd07386 MPP_DNA_pol_II_small_a 96.4 0.011 2.5E-07 54.9 7.7 68 57-126 2-95 (243)
81 COG4186 Predicted phosphoester 96.4 0.0087 1.9E-07 52.5 6.2 71 55-129 5-90 (186)
82 cd07380 MPP_CWF19_N Schizosacc 96.3 0.0075 1.6E-07 52.6 5.7 119 57-248 1-121 (150)
83 cd07384 MPP_Cdc1_like Saccharo 96.3 0.0091 2E-07 53.0 6.3 48 79-126 44-101 (171)
84 cd08163 MPP_Cdc1 Saccharomyces 96.1 0.076 1.7E-06 50.3 11.5 24 224-247 203-226 (257)
85 cd00845 MPP_UshA_N_like Escher 96.1 0.014 3E-07 54.3 6.4 66 55-125 2-82 (252)
86 cd08166 MPP_Cdc1_like_1 unchar 95.9 0.016 3.5E-07 52.8 6.0 46 80-125 42-93 (195)
87 COG0420 SbcD DNA repair exonuc 95.7 0.035 7.6E-07 55.3 7.8 74 54-127 1-90 (390)
88 cd08164 MPP_Ted1 Saccharomyces 95.0 0.056 1.2E-06 49.1 6.1 65 61-125 24-111 (193)
89 COG1311 HYS2 Archaeal DNA poly 94.9 1.5 3.2E-05 45.0 16.4 208 55-285 227-461 (481)
90 KOG0918 Selenium-binding prote 94.9 0.0015 3.2E-08 64.7 -4.8 194 82-286 49-251 (476)
91 PF14582 Metallophos_3: Metall 94.6 0.036 7.8E-07 51.6 3.8 73 54-126 6-103 (255)
92 cd07410 MPP_CpdB_N Escherichia 94.4 0.064 1.4E-06 50.9 5.2 65 55-124 2-94 (277)
93 PLN02533 probable purple acid 94.3 0.059 1.3E-06 54.7 5.1 71 53-126 139-212 (427)
94 cd07378 MPP_ACP5 Homo sapiens 93.6 0.16 3.5E-06 47.7 6.1 70 55-125 2-83 (277)
95 cd07387 MPP_PolD2_C PolD2 (DNA 93.4 7.2 0.00016 37.0 17.0 47 239-290 205-254 (257)
96 COG1407 Predicted ICC-like pho 93.4 0.26 5.6E-06 46.1 7.0 73 53-128 19-113 (235)
97 cd07408 MPP_SA0022_N Staphyloc 93.2 0.13 2.9E-06 48.2 5.0 66 55-125 2-82 (257)
98 cd07412 MPP_YhcR_N Bacillus su 91.4 0.25 5.5E-06 47.3 4.5 66 55-125 2-88 (288)
99 PF08321 PPP5: PPP5 TPR repeat 91.2 0.49 1.1E-05 38.2 5.2 43 2-52 53-95 (95)
100 KOG3662 Cell division control 90.5 0.56 1.2E-05 47.3 6.0 56 69-124 81-143 (410)
101 KOG2863 RNA lariat debranching 90.4 0.55 1.2E-05 46.5 5.7 73 54-126 1-89 (456)
102 cd00842 MPP_ASMase acid sphing 90.2 0.62 1.3E-05 44.4 5.9 73 56-128 40-125 (296)
103 cd07411 MPP_SoxB_N Thermus the 90.1 0.52 1.1E-05 44.4 5.2 65 55-125 2-95 (264)
104 PRK09419 bifunctional 2',3'-cy 87.5 0.69 1.5E-05 52.8 4.8 65 55-124 662-735 (1163)
105 cd07409 MPP_CD73_N CD73 ecto-5 86.9 1.1 2.3E-05 42.8 5.1 66 55-125 2-94 (281)
106 KOG3325 Membrane coat complex 86.4 11 0.00023 33.2 10.4 116 56-254 3-124 (183)
107 COG1768 Predicted phosphohydro 85.6 1.6 3.5E-05 39.4 5.1 74 79-163 42-117 (230)
108 TIGR00282 metallophosphoestera 85.4 1.8 4E-05 41.3 5.8 67 54-125 1-71 (266)
109 PF04042 DNA_pol_E_B: DNA poly 83.8 1.9 4.1E-05 38.8 4.9 72 56-127 1-93 (209)
110 cd07406 MPP_CG11883_N Drosophi 83.5 2.2 4.7E-05 40.1 5.4 56 64-124 21-82 (257)
111 KOG2476 Uncharacterized conser 79.4 4.2 9.1E-05 41.6 5.9 69 53-122 5-75 (528)
112 cd07382 MPP_DR1281 Deinococcus 77.3 6 0.00013 37.5 6.1 66 55-125 1-70 (255)
113 COG0737 UshA 5'-nucleotidase/2 77.1 2.9 6.3E-05 43.3 4.3 68 53-125 26-115 (517)
114 cd07407 MPP_YHR202W_N Saccharo 76.4 3.5 7.5E-05 39.6 4.3 66 55-125 7-97 (282)
115 cd07405 MPP_UshA_N Escherichia 74.3 3.2 6.9E-05 39.7 3.5 66 55-125 2-87 (285)
116 cd08162 MPP_PhoA_N Synechococc 72.6 5.8 0.00013 38.6 4.9 64 56-124 3-90 (313)
117 KOG1432 Predicted DNA repair e 71.0 7.3 0.00016 38.6 5.0 72 55-127 55-149 (379)
118 PRK09420 cpdB bifunctional 2', 70.9 5.6 0.00012 42.7 4.7 68 52-124 24-121 (649)
119 TIGR01390 CycNucDiestase 2',3' 70.3 5.8 0.00013 42.4 4.6 66 54-124 3-98 (626)
120 PRK09419 bifunctional 2',3'-cy 68.5 6.2 0.00013 45.2 4.6 66 54-124 42-138 (1163)
121 COG3855 Fbp Uncharacterized pr 66.6 4.3 9.2E-05 41.6 2.5 57 225-282 514-580 (648)
122 KOG3339 Predicted glycosyltran 65.9 47 0.001 30.3 8.6 87 82-173 40-143 (211)
123 PRK09558 ushA bifunctional UDP 63.5 10 0.00022 39.7 4.8 68 53-125 34-121 (551)
124 PF14164 YqzH: YqzH-like prote 62.5 29 0.00062 26.0 5.6 47 1-48 1-47 (64)
125 TIGR01530 nadN NAD pyrophospha 61.6 14 0.00031 38.8 5.4 65 56-125 3-94 (550)
126 PRK11907 bifunctional 2',3'-cy 59.6 12 0.00026 41.3 4.5 66 54-124 116-212 (814)
127 PTZ00422 glideosome-associated 59.1 18 0.0004 36.5 5.4 72 54-125 27-109 (394)
128 PTZ00235 DNA polymerase epsilo 57.2 51 0.0011 31.9 7.9 73 54-126 28-123 (291)
129 KOG3947 Phosphoesterases [Gene 51.7 20 0.00044 34.5 4.1 63 54-126 62-127 (305)
130 PF06874 FBPase_2: Firmicute f 48.3 17 0.00037 38.7 3.3 40 83-127 187-226 (640)
131 KOG2310 DNA repair exonuclease 47.1 65 0.0014 34.0 7.2 51 54-104 14-76 (646)
132 KOG1458 Fructose-1,6-bisphosph 45.1 22 0.00048 34.5 3.3 97 239-335 162-267 (343)
133 PRK09418 bifunctional 2',3'-cy 43.6 31 0.00066 38.0 4.5 67 53-124 39-141 (780)
134 KOG2679 Purple (tartrate-resis 41.1 28 0.00061 33.6 3.3 68 54-125 44-126 (336)
135 PF12641 Flavodoxin_3: Flavodo 37.0 1.6E+02 0.0034 25.8 7.3 58 57-117 2-72 (160)
136 PF02875 Mur_ligase_C: Mur lig 35.1 1.2E+02 0.0026 23.2 5.6 69 54-122 12-82 (91)
137 PF09637 Med18: Med18 protein; 25.9 1E+02 0.0022 29.0 4.4 39 225-266 139-177 (250)
138 KOG1378 Purple acid phosphatas 24.8 1.5E+02 0.0032 30.6 5.6 34 227-260 322-355 (452)
139 PF15007 CEP44: Centrosomal sp 24.3 23 0.00049 30.3 -0.3 83 61-159 1-87 (131)
140 PF10083 DUF2321: Uncharacteri 24.2 45 0.00098 29.3 1.5 46 222-273 20-74 (158)
141 TIGR00282 metallophosphoestera 22.2 74 0.0016 30.4 2.7 39 83-125 2-41 (266)
142 COG3855 Fbp Uncharacterized pr 21.8 41 0.00088 34.8 0.9 40 83-127 193-232 (648)
143 PLN00084 photosystem II subuni 21.8 52 0.0011 29.4 1.4 37 87-124 9-52 (214)
144 PF13258 DUF4049: Domain of un 20.4 90 0.002 29.6 2.8 57 113-175 128-186 (318)
145 KOG3425 Uncharacterized conser 20.3 3.3E+02 0.0072 23.1 5.8 57 66-125 12-79 (128)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-83 Score=580.17 Aligned_cols=286 Identities=48% Similarity=0.960 Sum_probs=277.4
Q ss_pred HHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCceE
Q 019125 5 VLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANY 84 (346)
Q Consensus 5 ~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~ 84 (346)
+++..|++|.+.+ .++++++..||.+++++|.+|++++.++.|++|+||||||+.||+.+|+..|-++..+|
T Consensus 2 dldr~ie~L~~~~--------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~Y 73 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE--------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNY 73 (303)
T ss_pred cHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCce
Confidence 4788999998876 68999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhc-hhhHHhhchhhccCCceEEEc
Q 019125 85 LFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLPVAALVD 163 (346)
Q Consensus 85 vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaaii~ 163 (346)
+|||||||||.+|+|+++||++||++||++|.+||||||.+.++..|||++||.++|+ ...|+.+.+.|++||++|+|+
T Consensus 74 LFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid 153 (303)
T KOG0372|consen 74 LFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIID 153 (303)
T ss_pred EeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 689999999999999999999
Q ss_pred CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEe
Q 019125 164 EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICR 243 (346)
Q Consensus 164 ~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIR 243 (346)
+++||||||+||.+.+++||+.+.|..++|..+.++|+|||||++. .||+.++||+|+.||.+++++||+.||+++|+|
T Consensus 154 ~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~R 232 (303)
T KOG0372|consen 154 GKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICR 232 (303)
T ss_pred CcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHH
Confidence 9999999999999999999999999999999999999999999865 699999999999999999999999999999999
Q ss_pred eecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCCcc
Q 019125 244 AHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 299 (346)
Q Consensus 244 gH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 299 (346)
+||-+++||++.++++++|||||||||+.++|.||+|.++++....|.+|+..+..
T Consensus 233 aHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~ 288 (303)
T KOG0372|consen 233 AHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQE 288 (303)
T ss_pred HHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhh
Confidence 99999999999999999999999999999999999999999999999999987654
No 2
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=7.1e-82 Score=609.01 Aligned_cols=296 Identities=70% Similarity=1.254 Sum_probs=283.6
Q ss_pred ChhHHHHHHHHHHhccCCCCC--ccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCC-C
Q 019125 2 DETVLDDIIRRLLDAKNGRTT--KQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGG-Y 78 (346)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~--~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g-~ 78 (346)
....++++|.+++........ ....++++++.+||..+.++|.++|+++++++||+|+|||||||.||+++|+..| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 456778889999887643332 2556999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhc-hhhHHhhchhhccCC
Q 019125 79 PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLP 157 (346)
Q Consensus 79 ~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP 157 (346)
|++.+|||||||||||++|+|++++|+++|++||+++++||||||++.+|..|||++||.++|+ ..+|+.|+++|++||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 699999999999999
Q ss_pred ceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCC
Q 019125 158 VAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHD 237 (346)
Q Consensus 158 laaii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~ 237 (346)
++|+|+++++|+|||++|.+.++++|++|.||.+.++.++++|||||||+....+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred CceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCC
Q 019125 238 LDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASE 297 (346)
Q Consensus 238 l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 297 (346)
+++||||||++++|||+|++++++||||||+|||+++|+||+|.||+++.|+|++++|..
T Consensus 245 ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~ 304 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEG 304 (331)
T ss_pred cceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEecccc
Confidence 999999999999999999999999999999999999999999999999999999999963
No 3
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.1e-78 Score=585.00 Aligned_cols=299 Identities=76% Similarity=1.367 Sum_probs=287.4
Q ss_pred hhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCc
Q 019125 3 ETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEA 82 (346)
Q Consensus 3 ~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~ 82 (346)
+..++.+|+++++.+.+.++....|+++++.+||++|+++|++||++++++.|+.||||||||+.+|.++|+..++++.+
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~ 87 (320)
T PTZ00480 8 EIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES 87 (320)
T ss_pred CcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc
Confidence 45689999999998766666677899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEE
Q 019125 83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALV 162 (346)
Q Consensus 83 ~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii 162 (346)
+|||||||||||++|+|++.+++++|+.+|.++++||||||...++..|||..||..+|+..+|..++++|++||+||+|
T Consensus 88 ~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI 167 (320)
T PTZ00480 88 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALI 167 (320)
T ss_pred eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEE
Q 019125 163 DEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLIC 242 (346)
Q Consensus 163 ~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~II 242 (346)
++++|||||||+|.+.++++|+++.||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||
T Consensus 168 ~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~Ii 247 (320)
T PTZ00480 168 DEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLIC 247 (320)
T ss_pred cCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEE
Confidence 99999999999999999999999999999999999999999999987789999999999999999999999999999999
Q ss_pred eeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCCccCC
Q 019125 243 RAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 301 (346)
Q Consensus 243 RgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~ 301 (346)
||||++++||+++++++|+||||||||||..+|+||+|.|++++.+.|++++|.+....
T Consensus 248 R~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~ 306 (320)
T PTZ00480 248 RAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQG 306 (320)
T ss_pred EcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccccc
Confidence 99999999999999999999999999999999999999999999999999998876533
No 4
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=2.8e-77 Score=571.20 Aligned_cols=291 Identities=82% Similarity=1.444 Sum_probs=282.3
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCceEE
Q 019125 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (346)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~v 85 (346)
++.+|+++++.+.+..+....++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 68899999998766667778899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEcCc
Q 019125 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEK 165 (346)
Q Consensus 86 fLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~ 165 (346)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeee
Q 019125 166 ILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAH 245 (346)
Q Consensus 166 il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH 245 (346)
+||||||++|.+.++++|+++.||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred cccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecC
Q 019125 246 QVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKAS 296 (346)
Q Consensus 246 ~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 296 (346)
|++++||+++++++|+||||||||||..+|+||+|.|++++.+.|++++|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999875
No 5
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3.5e-77 Score=570.22 Aligned_cols=292 Identities=60% Similarity=1.139 Sum_probs=281.1
Q ss_pred hHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCce
Q 019125 4 TVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEAN 83 (346)
Q Consensus 4 ~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~ 83 (346)
..++.+|+++++...+..+....++++++.+||++|+++|++||+++++++|++|+|||||||.+|.++|+..++++.++
T Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~ 81 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSN 81 (294)
T ss_pred chHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCccc
Confidence 56789999999977666666678999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEc
Q 019125 84 YLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVD 163 (346)
Q Consensus 84 ~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~ 163 (346)
|+|||||||||++|+|++.+++++|+.+|.+++++|||||.+.++..|||.+|+..+|+.++|+.+.++|++||++|+++
T Consensus 82 ~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 82 YLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEe
Q 019125 164 EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICR 243 (346)
Q Consensus 164 ~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIR 243 (346)
++++|||||++|.+.+++++++++||.+.++.++++|+|||||.....+|.+++||.|+.||++++++||++||+++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 99999999999999999999999999999999999999999999877899999999999999999999999999999999
Q ss_pred eecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeec
Q 019125 244 AHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 295 (346)
Q Consensus 244 gH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p 295 (346)
|||++++||+++++++|+||||||||||..+|+||+|.|++++.++|.+++.
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999998764
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=5e-76 Score=567.06 Aligned_cols=283 Identities=34% Similarity=0.613 Sum_probs=260.2
Q ss_pred ChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccC----cEEEEcCCCCCHHHHHHHHHhCC
Q 019125 2 DETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEA----PIKICGDVHGQFSDLLRLFEYGG 77 (346)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~----~i~ViGDIHG~~~~L~~ll~~~g 77 (346)
+-..++.+|+++++.+ .|+++++.+||++|+++|++||++++++. |++|||||||||.+|.++|+..|
T Consensus 3 ~~~~~~~~i~~~~~~~--------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g 74 (321)
T cd07420 3 TKDHIDALIEAFKEKQ--------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNG 74 (321)
T ss_pred CHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcC
Confidence 3457889999998754 68999999999999999999999999976 89999999999999999999999
Q ss_pred CCC-CceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhc---hhhHHhhchhh
Q 019125 78 YPP-EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN---VRVWKTFTDCF 153 (346)
Q Consensus 78 ~~~-~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~---~~~~~~~~~~f 153 (346)
+++ .++|+|||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ .++|+.++++|
T Consensus 75 ~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F 154 (321)
T cd07420 75 LPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVF 154 (321)
T ss_pred CCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHH
Confidence 985 46899999999999999999999999999999999999999999999999999999999997 78999999999
Q ss_pred ccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCC-----CCC----------------------cchhhhhhhCCC
Q 019125 154 NCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVD-----VPD----------------------QGLLCDLLWADP 206 (346)
Q Consensus 154 ~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~~-----~~~----------------------~~~~~dlLWsDP 206 (346)
++||+||+|++++|||||||++ ..++++|++|+|+.. .|. .+++.|+|||||
T Consensus 155 ~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP 233 (321)
T cd07420 155 SWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDP 233 (321)
T ss_pred HhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCC
Confidence 9999999999999999999997 568999999988421 111 146889999999
Q ss_pred CCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCC
Q 019125 207 DKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTL 286 (346)
Q Consensus 207 ~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~ 286 (346)
......|.+++||.|+.||++++++||++|++++||||||++++||+++++++|+||||||||||.++|+||+|.+++++
T Consensus 234 ~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~ 313 (321)
T cd07420 234 KAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDL 313 (321)
T ss_pred ccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCC
Confidence 86655577778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEe
Q 019125 287 TCSFQIL 293 (346)
Q Consensus 287 ~~~~~~~ 293 (346)
.++|+++
T Consensus 314 ~~~f~~~ 320 (321)
T cd07420 314 TPHFVQY 320 (321)
T ss_pred ceeEEEe
Confidence 9888765
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=8.4e-76 Score=559.05 Aligned_cols=283 Identities=52% Similarity=0.994 Sum_probs=272.7
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCceEE
Q 019125 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (346)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~v 85 (346)
++++|+++++.. .++++++.+||++|+++|++||++++++.|++|+||||||+.+|.++|+..++++.++|+
T Consensus 2 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~l 73 (285)
T cd07415 2 LDKWIEQLKKCE--------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYL 73 (285)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 678899998744 589999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhch-hhHHhhchhhccCCceEEEcC
Q 019125 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV-RVWKTFTDCFNCLPVAALVDE 164 (346)
Q Consensus 86 fLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPlaaii~~ 164 (346)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+||..+|+. .+|+.++++|++||++|++++
T Consensus 74 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~ 153 (285)
T cd07415 74 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDN 153 (285)
T ss_pred EEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCC
Confidence 9999999999999999999999999999999999999999999999999999999974 899999999999999999999
Q ss_pred cEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEee
Q 019125 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA 244 (346)
Q Consensus 165 ~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRg 244 (346)
+++||||||+|.+.++++|++++||.+.+..+++.|+|||||... .+|.+|+||.|+.||++++++||++||+++||||
T Consensus 154 ~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 232 (285)
T cd07415 154 QIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRA 232 (285)
T ss_pred eEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEc
Confidence 999999999999999999999999999999999999999999865 7899999999999999999999999999999999
Q ss_pred ecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCC
Q 019125 245 HQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASE 297 (346)
Q Consensus 245 H~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 297 (346)
||++++||+++++++|+|||||||||+.++|+||+|.|++++.+.|.+++|.+
T Consensus 233 He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 233 HQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred CccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999999999999863
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=4.4e-75 Score=557.58 Aligned_cols=286 Identities=47% Similarity=0.938 Sum_probs=272.6
Q ss_pred HHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCceE
Q 019125 5 VLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANY 84 (346)
Q Consensus 5 ~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~ 84 (346)
.++.+|+++.+.. .++++++.+||++|+++|++||++++++.|++|+||||||+.+|.++|+..+.++.++|
T Consensus 2 ~~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~ 73 (303)
T PTZ00239 2 DIDRHIATLLNGG--------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANY 73 (303)
T ss_pred CHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceE
Confidence 3788999998754 58999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhch-hhHHhhchhhccCCceEEEc
Q 019125 85 LFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV-RVWKTFTDCFNCLPVAALVD 163 (346)
Q Consensus 85 vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPlaaii~ 163 (346)
+|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|+.++++|++||++|+++
T Consensus 74 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~ 153 (303)
T PTZ00239 74 IFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIE 153 (303)
T ss_pred EEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEc
Confidence 99999999999999999999999999999999999999999999999999999999974 78999999999999999999
Q ss_pred CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEe
Q 019125 164 EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICR 243 (346)
Q Consensus 164 ~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIR 243 (346)
+++||||||++|.+.++++|+.+.||.+.|..+.++|+|||||.. ..+|.+|+||.|+.||++++++||++||+++|||
T Consensus 154 ~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 232 (303)
T PTZ00239 154 GQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICR 232 (303)
T ss_pred CeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEE
Confidence 999999999999999999999999999999999999999999984 4789999999999999999999999999999999
Q ss_pred eecccccCeEEecC-CeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCCcc
Q 019125 244 AHQVVEDGYEFFAK-RQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 299 (346)
Q Consensus 244 gH~~v~~G~~~~~~-~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 299 (346)
|||++++||+++++ ++|+|||||||||+..+|+||+|.+++++.+.|.+++|.+.+
T Consensus 233 ~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 233 AHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred cChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 99999999998654 569999999999999999999999999999999999998765
No 9
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.7e-73 Score=540.31 Aligned_cols=270 Identities=58% Similarity=1.067 Sum_probs=263.0
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHH
Q 019125 27 LTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLA 106 (346)
Q Consensus 27 l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~ 106 (346)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|+|||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhcc
Q 019125 107 YKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNI 186 (346)
Q Consensus 107 lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i 186 (346)
+|+.+|.++++||||||.+.++..|||.+|+..+|+.++|+.+.++|++||++++++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEecc
Q 019125 187 ARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSA 266 (346)
Q Consensus 187 ~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa 266 (346)
.||.+.++.++++|+|||||.....+|.+|+||.++.||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcEEEEEEcCCCceEEEEeecC
Q 019125 267 PNYCGEFDNAGAMMSVDDTLTCSFQILKAS 296 (346)
Q Consensus 267 ~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 296 (346)
||||+.++|+||++.+++++++++.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999998874
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.2e-73 Score=550.95 Aligned_cols=288 Identities=42% Similarity=0.782 Sum_probs=271.5
Q ss_pred ChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCc----EEEEcCCCCCHHHHHHHHHhCC
Q 019125 2 DETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAP----IKICGDVHGQFSDLLRLFEYGG 77 (346)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~----i~ViGDIHG~~~~L~~ll~~~g 77 (346)
+...++++++++...+ .|+++++.+||++|+++|++||++++++.| ++|||||||||.+|.++|+..+
T Consensus 12 ~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g 83 (316)
T cd07417 12 TLEFVKEMIEWFKDQK--------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNG 83 (316)
T ss_pred CHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcC
Confidence 4567888888887754 589999999999999999999999999866 9999999999999999999999
Q ss_pred CCCC-ceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccC
Q 019125 78 YPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCL 156 (346)
Q Consensus 78 ~~~~-~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~L 156 (346)
+++. ++|+|||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+..+|+.+.++|++|
T Consensus 84 ~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~L 163 (316)
T cd07417 84 LPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWL 163 (316)
T ss_pred CCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhc
Confidence 8765 579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEcCcEEEecCCC-CCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHh
Q 019125 157 PVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQK 235 (346)
Q Consensus 157 Plaaii~~~il~vHgGi-~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~ 235 (346)
|++++++++++|||||+ ++...++++++++.||.+.++.++++|+|||||... .+|.+|+||.|+.||++++++||++
T Consensus 164 Plaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~ 242 (316)
T cd07417 164 PLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEE 242 (316)
T ss_pred hHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHH
Confidence 99999999999999999 567889999999999999889999999999999864 6899999999999999999999999
Q ss_pred CCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcC-CCceEEEEeecCCc
Q 019125 236 HDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDD-TLTCSFQILKASEK 298 (346)
Q Consensus 236 ~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~-~~~~~~~~~~p~~~ 298 (346)
||+++||||||++++||+++++++|+||||||||||.++|+||+|.|++ ++++.|++++|.+.
T Consensus 243 n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~ 306 (316)
T cd07417 243 NNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPH 306 (316)
T ss_pred cCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCC
Confidence 9999999999999999999999999999999999999999999999999 89999999988754
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=2.4e-73 Score=547.10 Aligned_cols=285 Identities=43% Similarity=0.838 Sum_probs=267.7
Q ss_pred HHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCceE
Q 019125 5 VLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANY 84 (346)
Q Consensus 5 ~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~ 84 (346)
.++.+++.+.+.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|
T Consensus 2 ~~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~y 73 (305)
T cd07416 2 RIDVLKAHFMREG--------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRY 73 (305)
T ss_pred CHHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceE
Confidence 3566777777654 58999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEcC
Q 019125 85 LFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE 164 (346)
Q Consensus 85 vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~ 164 (346)
+|||||||||++|+|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.++|+.+.++|++||+++++++
T Consensus 74 lFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~ 153 (305)
T cd07416 74 LFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQ 153 (305)
T ss_pred EEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCC------CCccC-CCCcccccCHHHHHHHHHhCC
Q 019125 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIE------GWGEN-DRGVSYTFGADKVVEFLQKHD 237 (346)
Q Consensus 165 ~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~------~~~~n-~rg~~~~FG~~~~~~fl~~~~ 237 (346)
+++|||||++|.+.++++|++++||.+.+..++++|+|||||..... +|.+| +||.++.||++++++||++||
T Consensus 154 ~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~ 233 (305)
T cd07416 154 QFLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNN 233 (305)
T ss_pred CEEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999975432 47766 899999999999999999999
Q ss_pred CceEEeeecccccCeEEecCC------eEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCCc
Q 019125 238 LDLICRAHQVVEDGYEFFAKR------QLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK 298 (346)
Q Consensus 238 l~~IIRgH~~v~~G~~~~~~~------~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~ 298 (346)
+++||||||++++||++++++ +|+||||||||||.++|+||+|.++++. +.|+++.|.+-
T Consensus 234 l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 234 LLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred CeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 999999999999999998876 8999999999999999999999999985 68999988753
No 12
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-74 Score=518.02 Aligned_cols=290 Identities=45% Similarity=0.911 Sum_probs=278.7
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCC
Q 019125 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPP 80 (346)
Q Consensus 1 ~~~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~ 80 (346)
|-..++|+.|+.....+ .|+++|+..||+.++++|..|.++..++.|+.|+||||||+.||+++|+..|--|
T Consensus 1 m~~~d~d~wi~~vk~ck--------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP 72 (306)
T KOG0373|consen 1 MRKMDLDQWIETVKKCK--------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVP 72 (306)
T ss_pred CCcCCHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCC
Confidence 44567889999998877 6999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhc-hhhHHhhchhhccCCce
Q 019125 81 EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLPVA 159 (346)
Q Consensus 81 ~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPla 159 (346)
+.+|+|+|||||||.+|+|++.+|+.||.+||.+|.+||||||.+.+...|||++||..+|+ ...|+.+.++|+.|++|
T Consensus 73 ~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~Ltla 152 (306)
T KOG0373|consen 73 DTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLA 152 (306)
T ss_pred CcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999996 58999999999999999
Q ss_pred EEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCc
Q 019125 160 ALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLD 239 (346)
Q Consensus 160 aii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~ 239 (346)
|+|+++++|||||+||++.+++||+-|.|..++|..+.+||++||||+. ++.|.-++||+|+.||.+++++|..-|+++
T Consensus 153 AiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~ 231 (306)
T KOG0373|consen 153 AIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLN 231 (306)
T ss_pred HHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchH
Confidence 9999999999999999999999999999999999999999999999985 789999999999999999999999999999
Q ss_pred eEEeeecccccCeEEecCCe-EEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCCcc
Q 019125 240 LICRAHQVVEDGYEFFAKRQ-LVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 299 (346)
Q Consensus 240 ~IIRgH~~v~~G~~~~~~~~-~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 299 (346)
+|+|+||.|++||++.+++| ++|||||||||+.++|.+++|.++++++.+++++...+..
T Consensus 232 LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 232 LICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 99999999999999988777 9999999999999999999999999999999999887654
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.3e-72 Score=543.74 Aligned_cols=287 Identities=46% Similarity=0.857 Sum_probs=269.4
Q ss_pred HHHHHHhccCCCC--CccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCC-----
Q 019125 9 IIRRLLDAKNGRT--TKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPE----- 81 (346)
Q Consensus 9 ~i~~l~~~~~~~~--~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~----- 81 (346)
+|++++++..|+. ..+..|+++++.+||++|+++|++||+++++++|++|||||||||.+|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 4789999998876 667889999999999999999999999999999999999999999999999999998754
Q ss_pred ---ceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhch------hhHHhhchh
Q 019125 82 ---ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV------RVWKTFTDC 152 (346)
Q Consensus 82 ---~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~------~~~~~~~~~ 152 (346)
.+|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..+|..+|+. .+|..++++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999865 689999999
Q ss_pred hccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCC-CCCCcchhhhhhhCCCCCC--CCCCccCC---CCcc--ccc
Q 019125 153 FNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPV-DVPDQGLLCDLLWADPDKD--IEGWGEND---RGVS--YTF 224 (346)
Q Consensus 153 f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~-~~~~~~~~~dlLWsDP~~~--~~~~~~n~---rg~~--~~F 224 (346)
|++||++++++++++|||||++|.+.++++|+++.||. ..+..++++|+|||||... ..+|.+++ ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999998 4456788999999999864 45777776 9988 799
Q ss_pred CHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeec
Q 019125 225 GADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 295 (346)
Q Consensus 225 G~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p 295 (346)
|++++++||++||+++||||||++++||+++++++|+|||||||||+.++|+||++.+++++++++.+++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2e-68 Score=522.02 Aligned_cols=293 Identities=33% Similarity=0.619 Sum_probs=256.1
Q ss_pred ChhHHHHHHHHHHhccCCC--CCccccCCHHHHHHHHHHHHHHHhhCCCceecc----CcEEEEcCCCCCHHHHHHHHHh
Q 019125 2 DETVLDDIIRRLLDAKNGR--TTKQVQLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEY 75 (346)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~--~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~----~~i~ViGDIHG~~~~L~~ll~~ 75 (346)
+...++.+|+++......- ......++++++.+||++|+++|++||++++++ .|++||||||||+.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 3456788888886542111 122345889999999999999999999999998 7999999999999999999999
Q ss_pred CCCCCC-ceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhch---hhHHhhch
Q 019125 76 GGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV---RVWKTFTD 151 (346)
Q Consensus 76 ~g~~~~-~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~---~~~~~~~~ 151 (346)
.|+++. ..|||||||||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||.+|+..+|+. .+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 999875 46999999999999999999999999999999999999999999999999999999999964 69999999
Q ss_pred hhccCCceEEEcCcEEEecCCCC---------------------------CCCCCHHHHhcccCCC-CCCCcc---hhhh
Q 019125 152 CFNCLPVAALVDEKILCMHGGLS---------------------------PDLKNLDQIRNIARPV-DVPDQG---LLCD 200 (346)
Q Consensus 152 ~f~~LPlaaii~~~il~vHgGi~---------------------------p~~~~le~i~~i~rp~-~~~~~~---~~~d 200 (346)
+|++||+++++++++|||||||+ |.+.++++|++++||. +.+..+ +++|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 99999999999999999999993 4567999999999984 565544 4789
Q ss_pred hhhCCCCCCCCCCccC-CCCcccccCHHHHHHHHHhCCCceEEeeecc------------cccCeEEecC---CeEEEEe
Q 019125 201 LLWADPDKDIEGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQV------------VEDGYEFFAK---RQLVTVF 264 (346)
Q Consensus 201 lLWsDP~~~~~~~~~n-~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~------------v~~G~~~~~~---~~~iTiF 264 (346)
+|||||... .+|.+| .||.|+.||++++++||++|++++||||||+ +++||+++++ ++|+|||
T Consensus 248 lLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvF 326 (377)
T cd07418 248 VLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLF 326 (377)
T ss_pred eEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEe
Confidence 999999864 677776 7999999999999999999999999999996 6899999887 9999999
Q ss_pred ccCCCC------CCCCCcEEEEEEcCCC--ceEEEEeec
Q 019125 265 SAPNYC------GEFDNAGAMMSVDDTL--TCSFQILKA 295 (346)
Q Consensus 265 Sa~~Y~------~~~~N~ga~l~i~~~~--~~~~~~~~p 295 (346)
|||||| +.++|+||++.++.+. ..+|.+++.
T Consensus 327 Sa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~ 365 (377)
T cd07418 327 SAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEA 365 (377)
T ss_pred cCCccccccccccccCcceEEEEEecCCCCCccceEeec
Confidence 999999 6789999999996654 445555443
No 15
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-67 Score=480.15 Aligned_cols=284 Identities=49% Similarity=0.947 Sum_probs=272.4
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCceEE
Q 019125 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (346)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~v 85 (346)
++..|+.|.+.+ .+++.++..+|+.|+++|.+|.++..++.|++|+||+||||++|+++|+..|..++.+|+
T Consensus 20 vd~~ie~L~~ck--------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnyl 91 (319)
T KOG0371|consen 20 VDPWIEQLYKCK--------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYL 91 (319)
T ss_pred cccchHHHHhcC--------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCccee
Confidence 455667777666 789999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHh-chhhHHhhchhhccCCceEEEcC
Q 019125 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF-NVRVWKTFTDCFNCLPVAALVDE 164 (346)
Q Consensus 86 fLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPlaaii~~ 164 (346)
|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||.++| +...|+.|.+.|+++|+.|.|++
T Consensus 92 fmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~ 171 (319)
T KOG0371|consen 92 FMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 171 (319)
T ss_pred eeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999 56899999999999999999999
Q ss_pred cEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEee
Q 019125 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA 244 (346)
Q Consensus 165 ~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRg 244 (346)
+|||+|||++|++.+++.++.+.|..++|.++.+||||||||+. .-+|+.++||.++.||.+..++|-.+||+++|.|+
T Consensus 172 ~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRa 250 (319)
T KOG0371|consen 172 KIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRA 250 (319)
T ss_pred ceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHH
Confidence 99999999999999999999999999999999999999999984 58999999999999999999999999999999999
Q ss_pred ecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCCc
Q 019125 245 HQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK 298 (346)
Q Consensus 245 H~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~ 298 (346)
||-+++||.+.+...++|+|||||||+.++|.+|++.++++....|..++|++.
T Consensus 251 hqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~ 304 (319)
T KOG0371|consen 251 HQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPR 304 (319)
T ss_pred HHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcc
Confidence 999999999999999999999999999999999999999999999999999753
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=8e-67 Score=494.09 Aligned_cols=271 Identities=43% Similarity=0.856 Sum_probs=254.8
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCceeccCcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHH
Q 019125 26 QLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLL 105 (346)
Q Consensus 26 ~l~~~~i~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~ 105 (346)
.++++..+.++.++..+|++|++++++++||.|+|||||||.||+++|+..|-|.+.+|+|||||||||.+|+|++.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhc
Q 019125 106 AYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRN 185 (346)
Q Consensus 106 ~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~ 185 (346)
+||+.||..+++||||||++.+...+.|..||.-+|+.++|++..+.|+.||+||+.++.++|||||+||.+.++++|++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcchhhhhhhCCCCCCC------CCCccC-CCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCC
Q 019125 186 IARPVDVPDQGLLCDLLWADPDKDI------EGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKR 258 (346)
Q Consensus 186 i~rp~~~~~~~~~~dlLWsDP~~~~------~~~~~n-~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~ 258 (346)
+.|..++|..+.+||||||||.++. +.|..| .||.+|.|...|+.+||+.||+--|||+||.++.||+.+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999997642 334444 699999999999999999999999999999999999987665
Q ss_pred e------EEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEeecCC
Q 019125 259 Q------LVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASE 297 (346)
Q Consensus 259 ~------~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 297 (346)
| +|||||||||-+.++|++|||...++. ..++++..++
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFncSP 343 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSP 343 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCCCC
Confidence 4 899999999999999999999988775 4556654443
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-57 Score=439.74 Aligned_cols=317 Identities=31% Similarity=0.563 Sum_probs=266.1
Q ss_pred hHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceecc----CcEEEEcCCCCCHHHHHHHHHhCCCC
Q 019125 4 TVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEYGGYP 79 (346)
Q Consensus 4 ~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l~----~~i~ViGDIHG~~~~L~~ll~~~g~~ 79 (346)
..++.+|+.+...+ .|++..+..++.+|+++|++-|++-+++ ..++||||+||.++||.-+|-+.|+|
T Consensus 119 ~~i~~lieaFk~kq--------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlP 190 (631)
T KOG0377|consen 119 NHIDLLIEAFKKKQ--------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLP 190 (631)
T ss_pred hHHHHHHHHHHHhh--------hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCC
Confidence 45667777765533 6899999999999999999999999985 46999999999999999999999999
Q ss_pred CCc-eEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHh---chhhHHhhchhhcc
Q 019125 80 PEA-NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF---NVRVWKTFTDCFNC 155 (346)
Q Consensus 80 ~~~-~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~---~~~~~~~~~~~f~~ 155 (346)
+.+ -|||.||+||||.+|+|||++|+++-+.||..+|+-|||||+..+|-.|||-.|+..+| +.++.+.+.++|.+
T Consensus 191 S~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~W 270 (631)
T KOG0377|consen 191 SSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRW 270 (631)
T ss_pred CCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHh
Confidence 775 59999999999999999999999999999999999999999999999999999999999 57889999999999
Q ss_pred CCceEEEcCcEEEecCCCCCCCCCHHHHhcccCC---------CCC-------------CCcchhhhhhhCCCCCCCCCC
Q 019125 156 LPVAALVDEKILCMHGGLSPDLKNLDQIRNIARP---------VDV-------------PDQGLLCDLLWADPDKDIEGW 213 (346)
Q Consensus 156 LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp---------~~~-------------~~~~~~~dlLWsDP~~~~~~~ 213 (346)
||++.+++.++|+||||+|. .++++-+.+|+|- ++. .++..+.|+|||||......|
T Consensus 271 LPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~ 349 (631)
T KOG0377|consen 271 LPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCV 349 (631)
T ss_pred cchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCC
Confidence 99999999999999999985 3567777776652 211 024567899999998765555
Q ss_pred ccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCCceEEEEe
Q 019125 214 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQIL 293 (346)
Q Consensus 214 ~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~ 293 (346)
...-||.|++||+|++.+||++++++++||+|||.++||||.++++|+|||||+||.....|+||++++.+.++-.|...
T Consensus 350 pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY 429 (631)
T KOG0377|consen 350 PNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQY 429 (631)
T ss_pred cccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHH
Confidence 55579999999999999999999999999999999999999999999999999999999999999999999887666544
Q ss_pred ecCCccCCccCCCCCCCCCCCCCCCCCCeehhhHHHHHHHHhccCCCC
Q 019125 294 KASEKKGKVGFGNNMLRPGTPPHKVTKPLVVIQLISLLVRTVRSHSPD 341 (346)
Q Consensus 294 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (346)
...... .|. +-..+.-+|=..|+..|...+++|+.|
T Consensus 430 ~a~k~t---------~~~---tlrqR~~~vEeSAlk~Lrerl~s~~sd 465 (631)
T KOG0377|consen 430 QAAKQT---------KRL---TLRQRMGIVEESALKELRERLRSHRSD 465 (631)
T ss_pred Hhhhhh---------hhh---hHHHHhhHHHHHHHHHHHHHHHhhhhH
Confidence 422111 111 111133455566777777777776654
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=7.2e-51 Score=400.43 Aligned_cols=273 Identities=44% Similarity=0.828 Sum_probs=256.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCceeccC----cEEEEcCCCCCHHHHHHHHHhCCCCCC-ceEEEeccccCCCCCcHHH
Q 019125 26 QLTEAEIRQLCAASKEIFLSQPNLLELEA----PIKICGDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIET 100 (346)
Q Consensus 26 ~l~~~~i~~l~~~a~~il~~ep~ll~l~~----~i~ViGDIHG~~~~L~~ll~~~g~~~~-~~~vfLGDyVDRG~~slev 100 (346)
.++...+-+|+..+..+++++|+++++.. .+.|+||+||++.+++++|+..|.|+. ..|+|.||+||||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 45666778999999999999999999864 489999999999999999999999876 5699999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCC-CCCCC
Q 019125 101 ICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLS-PDLKN 179 (346)
Q Consensus 101 l~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~-p~~~~ 179 (346)
+..+++.|+.+|+++|++|||||...++..|||.+++..+|..+.+..+.++|.+||++..++++++.+|||+. +.-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999995 55578
Q ss_pred HHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCe
Q 019125 180 LDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQ 259 (346)
Q Consensus 180 le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~ 259 (346)
++++++|.|+...++.+.++++|||||... .|.+++.||.+..||++++++||+.|++++|||||++.+.||++.++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 999999999988889999999999999865 8999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCcEEEEEEc-CCCceEEEEeecCCcc
Q 019125 260 LVTVFSAPNYCGEFDNAGAMMSVD-DTLTCSFQILKASEKK 299 (346)
Q Consensus 260 ~iTiFSa~~Y~~~~~N~ga~l~i~-~~~~~~~~~~~p~~~~ 299 (346)
|+|||||||||..++|.||++.++ +++...+..+++.+..
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~ 461 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHP 461 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCC
Confidence 999999999999999999999998 7788888888887644
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.1e-36 Score=278.79 Aligned_cols=214 Identities=49% Similarity=0.836 Sum_probs=178.8
Q ss_pred EEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHH
Q 019125 57 KICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 136 (346)
Q Consensus 57 ~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e 136 (346)
+|||||||++++|.++++..+.++.+.+||||||||||+.+.+++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988999999999999999999999999999877 8899999999999988776665543
Q ss_pred H---------HHHhchhhHHhhchhhccCCceEEEcC-cEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCC
Q 019125 137 C---------KRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADP 206 (346)
Q Consensus 137 ~---------~~~~~~~~~~~~~~~f~~LPlaaii~~-~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP 206 (346)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345677888999999999999987 99999999999876555444 2334456789999999
Q ss_pred CCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEE
Q 019125 207 DKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMS 281 (346)
Q Consensus 207 ~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~ 281 (346)
.........+.++. |+++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 75544344444444 999999999999999999999999999876778899999999999887777777653
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=7.6e-26 Score=211.70 Aligned_cols=121 Identities=23% Similarity=0.436 Sum_probs=97.1
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCC---------CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccc
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYP---------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~---------~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~ 124 (346)
+++.||||||||++.|.++|+++++. ..++++||||||||||+|.||+.+++.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998874 46789999999999999999999998774 56689999999999
Q ss_pred cchhhhcCC-------hHHHHHHh-------chhhHHhhchhhccCCceEEEc-CcEEEecCCCCCC
Q 019125 125 ASINRIYGF-------YDECKRRF-------NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPD 176 (346)
Q Consensus 125 ~~i~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGi~p~ 176 (346)
+.++...+- ..+....| ...+++.+.++|+.||++..++ ++++|||||+.|.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 877543220 11112222 1246678899999999998774 5799999999875
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=6e-26 Score=207.56 Aligned_cols=176 Identities=21% Similarity=0.342 Sum_probs=130.9
Q ss_pred EEEcCCCCCHHHHHHHHHhCCC--------CCCceEEEeccccCCCCCcHHHHHHHHHHHHh---cCCcEEEeCCCcccc
Q 019125 57 KICGDVHGQFSDLLRLFEYGGY--------PPEANYLFLGDYVDRGKQSIETICLLLAYKVK---YKENFFLLRGNHECA 125 (346)
Q Consensus 57 ~ViGDIHG~~~~L~~ll~~~g~--------~~~~~~vfLGDyVDRG~~slevl~lL~~lki~---~p~~v~lLrGNHE~~ 125 (346)
+||||||||+++|.++|+.+++ .+.+.++|+||+||||+++.|++.+|+.++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35689999999999999999999999999764 456899999999999
Q ss_pred chhhhcCCh--HHHHHHhc-----hhhH---HhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCc
Q 019125 126 SINRIYGFY--DECKRRFN-----VRVW---KTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQ 195 (346)
Q Consensus 126 ~i~~~~gf~--~e~~~~~~-----~~~~---~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~ 195 (346)
.++..+.+. .+...... ...+ ..+.+|++.+|+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 887544332 11111000 1122 34478999999998876 69999999933
Q ss_pred chhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccC
Q 019125 196 GLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAP 267 (346)
Q Consensus 196 ~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~ 267 (346)
+|++.-.... .+.+ -|.+.++++++.++.++||+||++++.|....+++++++|.++.
T Consensus 140 ------~w~r~y~~~~---~~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKET---SDKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhhh---hhcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 3332210000 0000 02256889999999999999999999887668899999998853
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.91 E-value=6.7e-24 Score=195.88 Aligned_cols=115 Identities=25% Similarity=0.425 Sum_probs=91.4
Q ss_pred EEEcCCCCCHHHHHHHHHhCCCC--------CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchh
Q 019125 57 KICGDVHGQFSDLLRLFEYGGYP--------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN 128 (346)
Q Consensus 57 ~ViGDIHG~~~~L~~ll~~~g~~--------~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~ 128 (346)
.||||||||++.|.++|+++++. +.+.+|||||||||||+|.||+.+|+.++ .+.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 68999999999999999998775 46799999999999999999999999875 345899999999998774
Q ss_pred hhcC------Ch-----------HHHHHHhc--hhhHHhhchhhccCCceEEEcCcEEEecCCCC
Q 019125 129 RIYG------FY-----------DECKRRFN--VRVWKTFTDCFNCLPVAALVDEKILCMHGGLS 174 (346)
Q Consensus 129 ~~~g------f~-----------~e~~~~~~--~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~ 174 (346)
...+ +. .+..+.+. .+.++.+.+||+.||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 3211 00 11222221 34567889999999999775 58999999985
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.91 E-value=1.2e-23 Score=195.32 Aligned_cols=120 Identities=27% Similarity=0.507 Sum_probs=97.0
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCCC----------CceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcc
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYPP----------EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHE 123 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~~----------~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE 123 (346)
+|+.||||||||+.+|.++|+++++.+ .++++|||||||||++|.||+.+|+.++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 589999999999999999999998753 46899999999999999999999998864 457999999999
Q ss_pred ccchhhhc--------CChHHHHHHh---chhhHHhhchhhccCCceEEEc-CcEEEecCCCCCC
Q 019125 124 CASINRIY--------GFYDECKRRF---NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPD 176 (346)
Q Consensus 124 ~~~i~~~~--------gf~~e~~~~~---~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGi~p~ 176 (346)
.+.++... |+.. ....+ ..++.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEE-TVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCcccc-hHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 98776432 2222 12222 2456678889999999998776 4799999998764
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.91 E-value=1.8e-23 Score=198.71 Aligned_cols=217 Identities=17% Similarity=0.310 Sum_probs=144.5
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcC
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~g 132 (346)
|+++||||||||++.|.++++++++. ..+.++||||+|||||+|.||+.++..+ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57899999999999999999999874 5688999999999999999999999866 457999999999988776666
Q ss_pred Ch-----HHHHHHhchhhHHhhchhhccCCceEEE-cCcEEEecCCCCCCCCCHHHHhc----ccCCCCCCCc-chhhhh
Q 019125 133 FY-----DECKRRFNVRVWKTFTDCFNCLPVAALV-DEKILCMHGGLSPDLKNLDQIRN----IARPVDVPDQ-GLLCDL 201 (346)
Q Consensus 133 f~-----~e~~~~~~~~~~~~~~~~f~~LPlaaii-~~~il~vHgGi~p~~~~le~i~~----i~rp~~~~~~-~~~~dl 201 (346)
+. +...........+.+.+|++.+|+...+ ++++++||||++|.+ ++++... ++..+..++. .++..+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~-~~~~~~~~a~eve~~l~~~~~~~~~~~m 155 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW-DLATALALAREVEAVLRSDDYRDFLANM 155 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcHHHHHHHh
Confidence 43 1222222334556788999999998776 568999999999987 4333221 1112222222 244555
Q ss_pred hhCCCCCCCCCCccCCCCc-ccccCHHHHH--HHHHhCC-----------------------------CceEEeeecccc
Q 019125 202 LWADPDKDIEGWGENDRGV-SYTFGADKVV--EFLQKHD-----------------------------LDLICRAHQVVE 249 (346)
Q Consensus 202 LWsDP~~~~~~~~~n~rg~-~~~FG~~~~~--~fl~~~~-----------------------------l~~IIRgH~~v~ 249 (346)
-|+.|. .|.++-.|. ...|--.++. +||...| -..||-||.+..
T Consensus 156 y~~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l 231 (275)
T PRK00166 156 YGNEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAAL 231 (275)
T ss_pred cCCCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCccc
Confidence 555553 354443332 1122112211 1232222 347999999987
Q ss_pred cCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCC
Q 019125 250 DGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDT 285 (346)
Q Consensus 250 ~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~ 285 (346)
.|... ...++.+-|.--+. +.=..+.++..
T Consensus 232 ~G~~~--~~~~~~LDtGcvwg----g~Lta~~l~~~ 261 (275)
T PRK00166 232 EGLTT--PPNIIALDTGCVWG----GKLTALRLEDK 261 (275)
T ss_pred CCccC--CCCeEEeecccccC----CeEEEEEeCCC
Confidence 78765 45678887775442 33345666543
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=4.8e-24 Score=200.74 Aligned_cols=155 Identities=25% Similarity=0.441 Sum_probs=115.0
Q ss_pred EEEEcCCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCCh
Q 019125 56 IKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (346)
Q Consensus 56 i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~ 134 (346)
++||||||||+++|+++|+++++. +.+.++|+||||||||+|+||+.+++.++ .++++++||||.+.++..+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 479999999999999999999986 57899999999999999999999998875 5899999999999887666643
Q ss_pred -----HHHHHHhchhhHHhhchhhccCCceEEEcC-cEEEecCCCCCCCCCHHHHhcccCCC----CCCCc-chhhhhhh
Q 019125 135 -----DECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPV----DVPDQ-GLLCDLLW 203 (346)
Q Consensus 135 -----~e~~~~~~~~~~~~~~~~f~~LPlaaii~~-~il~vHgGi~p~~~~le~i~~i~rp~----~~~~~-~~~~dlLW 203 (346)
+.....+.....+.+.+|+..+|+...+++ ++++||||++|.+ ++++.....+.+ ..++. .++..+.|
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~~~~~a~eve~~l~~~~~~~~~~~my~ 155 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQALKLAREVEAALRGPNYREFLKNMYG 155 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcHHHHHHHhhC
Confidence 222222233455678899999999988765 8999999999988 555543333222 12222 34444555
Q ss_pred CCCCCCCCCCccCCCC
Q 019125 204 ADPDKDIEGWGENDRG 219 (346)
Q Consensus 204 sDP~~~~~~~~~n~rg 219 (346)
+.|. .|.++-.|
T Consensus 156 ~~p~----~W~~~l~g 167 (257)
T cd07422 156 NEPD----RWSDDLTG 167 (257)
T ss_pred CCCc----ccCcccCc
Confidence 5553 46655444
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.90 E-value=1.6e-23 Score=198.23 Aligned_cols=127 Identities=20% Similarity=0.373 Sum_probs=105.6
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcC
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~g 132 (346)
|.++||||||||+++|.++|+++++. ..+.++|+||+|||||+|+||+.++.++ +.++++|+||||.+.++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcC
Confidence 56899999999999999999999976 4688999999999999999999999876 456889999999998887777
Q ss_pred Ch-----HHHHHHhchhhHHhhchhhccCCceEEEc-CcEEEecCCCCCCCCCHHHHhc
Q 019125 133 FY-----DECKRRFNVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLKNLDQIRN 185 (346)
Q Consensus 133 f~-----~e~~~~~~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGi~p~~~~le~i~~ 185 (346)
+. +.....+.....+.+.+|+..+|+....+ .++++||||++|.+ ++++...
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~a~~ 134 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQTAKE 134 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHHHHH
Confidence 52 33434445567788999999999997654 36999999999998 5665443
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.88 E-value=1.3e-22 Score=186.63 Aligned_cols=177 Identities=21% Similarity=0.274 Sum_probs=116.7
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcC
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~g 132 (346)
++++||||||||+++|+++|+.+++. ..++++||||+|||||+|.||+.+|.. .++++|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999886 568899999999999999999999853 26789999999988764321
Q ss_pred ChHH--------HHHHh---chhhHHhhchhhccCCceEEEc---CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchh
Q 019125 133 FYDE--------CKRRF---NVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLL 198 (346)
Q Consensus 133 f~~e--------~~~~~---~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~ 198 (346)
-... ....+ ..+.+..+.++++.||+...++ +++++||||++... .+.. .+. ..
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~--~~~~----~~~------~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV--YEWQ----KDV------DL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc--hhhh----ccC------Cc
Confidence 1000 00111 1134456678999999997654 46999999984321 1100 110 12
Q ss_pred hhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCC
Q 019125 199 CDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNY 269 (346)
Q Consensus 199 ~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y 269 (346)
.+++|+++... ..+. .+ ...+.+.+|.||++++.-.. .+..+-|-+..-|
T Consensus 159 ~~~~w~r~~~~-~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 159 HQVLWSRSRLG-ERQK--GQ---------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred cceEEcChhhh-hccc--cc---------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 45688765311 0000 00 11245679999999875432 2335666665544
No 28
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.88 E-value=1.1e-21 Score=178.86 Aligned_cols=169 Identities=22% Similarity=0.304 Sum_probs=116.3
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcC
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~g 132 (346)
++++|||||||++.+|.++++..++. ..+.++|+|||||||+++.|++.+|.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47899999999999999999998875 468899999999999999999998853 36899999999998875544
Q ss_pred --ChHHHHHHhc---------hhhHHhhchhhccCCceEEEc---CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchh
Q 019125 133 --FYDECKRRFN---------VRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLL 198 (346)
Q Consensus 133 --f~~e~~~~~~---------~~~~~~~~~~f~~LPlaaii~---~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~ 198 (346)
...+.....+ .+.++.+.++|+.||+...++ .++++||||+++.. ..+.+.. +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~-~~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD-WSDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch-hhhhhhc-----cccCcccc
Confidence 2222222221 124566788999999998775 36999999986543 1111110 11122344
Q ss_pred hhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeE
Q 019125 199 CDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 253 (346)
Q Consensus 199 ~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~ 253 (346)
.+++|+++....... ...-+.+.||.||++.+..+.
T Consensus 149 ~~~~w~~~~~~~~~~-------------------~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQKAQT-------------------QPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhhhcCc-------------------cccCCCCEEEECCCCCCcceE
Confidence 678898764211000 001135679999999875443
No 29
>PHA02239 putative protein phosphatase
Probab=99.88 E-value=6.5e-22 Score=184.17 Aligned_cols=172 Identities=21% Similarity=0.306 Sum_probs=119.0
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCC--CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhc
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIY 131 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~--~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~ 131 (346)
|++++||||||+++.|.++++.+... +.+.++|+|||||||++|.+++..++.+.. .+.++++|+||||.+.++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987543 468899999999999999999999988753 466899999999998654221
Q ss_pred C-----Ch---------HHHHHHhc-------------------------------hhhHHhhchhhccCCceEEEcCcE
Q 019125 132 G-----FY---------DECKRRFN-------------------------------VRVWKTFTDCFNCLPVAALVDEKI 166 (346)
Q Consensus 132 g-----f~---------~e~~~~~~-------------------------------~~~~~~~~~~f~~LPlaaii~~~i 166 (346)
+ .. .+....|+ ...+..+..|++.||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 0 00 11112231 01234455688999999775 589
Q ss_pred EEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeec
Q 019125 167 LCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQ 246 (346)
Q Consensus 167 l~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~ 246 (346)
+|||||+.|... +++ ....+++|.+. . .+.. .=+.||.||+
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHT 199 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHT 199 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCC
Confidence 999999987642 222 12368999985 2 1111 1235899999
Q ss_pred ccccCeEEecCCeEEEEeccC
Q 019125 247 VVEDGYEFFAKRQLVTVFSAP 267 (346)
Q Consensus 247 ~v~~G~~~~~~~~~iTiFSa~ 267 (346)
++.++..... ++.|.|-+..
T Consensus 200 p~~~~~~~~~-~~~I~IDtGa 219 (235)
T PHA02239 200 PTDSGEVEIN-GDMLMCDVGA 219 (235)
T ss_pred CCCCCccccc-CCEEEeecCc
Confidence 9976543322 3456666654
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.86 E-value=4.5e-21 Score=182.22 Aligned_cols=74 Identities=32% Similarity=0.454 Sum_probs=64.3
Q ss_pred cEEEEcCCCCCHHHHHHHHHhCCC------CCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCC-cEEEeCCCccccch
Q 019125 55 PIKICGDVHGQFSDLLRLFEYGGY------PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKE-NFFLLRGNHECASI 127 (346)
Q Consensus 55 ~i~ViGDIHG~~~~L~~ll~~~g~------~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~-~v~lLrGNHE~~~i 127 (346)
++++||||||+++.|.++|+.+.. +..+.+|||||||||||+|.+|+.+|++++..+|. ++++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 689999999999999999986542 12457999999999999999999999999988876 68999999998755
Q ss_pred h
Q 019125 128 N 128 (346)
Q Consensus 128 ~ 128 (346)
.
T Consensus 83 ~ 83 (304)
T cd07421 83 A 83 (304)
T ss_pred h
Confidence 3
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.83 E-value=2.4e-20 Score=171.79 Aligned_cols=115 Identities=22% Similarity=0.293 Sum_probs=86.1
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcC
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~g 132 (346)
.++.||||||||+++|+++++...+. ..+.++||||||||||+|.|++.+|.+ .+++.+|||||.+.+....+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998865 568899999999999999999998852 36899999999988753311
Q ss_pred ChH--------HHHHHhch---hhHHhhchhhccCCceEEEc---CcEEEecCCCC
Q 019125 133 FYD--------ECKRRFNV---RVWKTFTDCFNCLPVAALVD---EKILCMHGGLS 174 (346)
Q Consensus 133 f~~--------e~~~~~~~---~~~~~~~~~f~~LPlaaii~---~~il~vHgGi~ 174 (346)
-.. +....+.. ........+++.||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 000 00011111 12234456899999998664 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.43 E-value=1.3e-12 Score=109.05 Aligned_cols=159 Identities=25% Similarity=0.290 Sum_probs=103.6
Q ss_pred CcEEEEcCCCCCHHHH----HHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHH--HHHHHhcCCcEEEeCCCccccch
Q 019125 54 APIKICGDVHGQFSDL----LRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLL--LAYKVKYKENFFLLRGNHECASI 127 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L----~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL--~~lki~~p~~v~lLrGNHE~~~i 127 (346)
++|+++||+|+.+... ..+.......+.+.+|++||++|++..+.+..... ...+...+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4789999999999987 34444444556688999999999999988877665 55666778899999999999876
Q ss_pred hhhcCChHHHHHH----------------------------------hchhhHHhhchhhccCCceEEEcCcEEEecCCC
Q 019125 128 NRIYGFYDECKRR----------------------------------FNVRVWKTFTDCFNCLPVAALVDEKILCMHGGL 173 (346)
Q Consensus 128 ~~~~gf~~e~~~~----------------------------------~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi 173 (346)
...+......... ...........+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 5433222221110 000111112222222333334455799999998
Q ss_pred CCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeeccc
Q 019125 174 SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVV 248 (346)
Q Consensus 174 ~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v 248 (346)
.+....-.+. .....+.+.+..++++.++++++.||+-.
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7643211110 12346678899999999999999999853
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.23 E-value=4e-10 Score=97.30 Aligned_cols=83 Identities=27% Similarity=0.376 Sum_probs=63.1
Q ss_pred cEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCCh
Q 019125 55 PIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (346)
Q Consensus 55 ~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~ 134 (346)
++.++||+||+...+.++++.... .+.++++||++++++.+. + .....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 478999999999999999998654 678999999999998765 1 234469999999998532
Q ss_pred HHHHHHhchhhHHhhchhhccCCceEEEc---CcEEEecCCCC
Q 019125 135 DECKRRFNVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLS 174 (346)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGi~ 174 (346)
+..+|....++ .+++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 24455444332 37999998754
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.19 E-value=4e-10 Score=96.41 Aligned_cols=152 Identities=20% Similarity=0.294 Sum_probs=91.3
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCC
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF 133 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf 133 (346)
|++.++||+|++...+.++++.+ ...+.++++||++|+ .+++..+..+ .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999988 346788999999993 6666666433 69999999996543221110
Q ss_pred hHHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCC
Q 019125 134 YDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGW 213 (346)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~ 213 (346)
+. +...... ..-..+++++||....
T Consensus 69 ----------~~------~~~~~~~-~~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 ----------EY------LLDALRL-TIDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp ----------CS------SHSEEEE-EETTEEEEEESSTSSS--------------------------------------
T ss_pred ----------cc------cccceee-eecCCeEEEECCCCcc--------------------------------------
Confidence 00 1111111 1123479999996543
Q ss_pred ccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEc
Q 019125 214 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVD 283 (346)
Q Consensus 214 ~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~ 283 (346)
...+.+.+.+.+...+.++++.||.-.+.-.+ ..+..+++.-|....- .+...+++.++
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 01345567777889999999999998754433 3344455554443221 12245555443
No 35
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.19 E-value=3.5e-11 Score=100.81 Aligned_cols=144 Identities=40% Similarity=0.668 Sum_probs=121.4
Q ss_pred hhhhcCChHHHHHHhchh-hHHh---hchhhccCCceEEEcC-cEEEecCCCCCCC-CCHHHHhcccCCC--CCCCcchh
Q 019125 127 INRIYGFYDECKRRFNVR-VWKT---FTDCFNCLPVAALVDE-KILCMHGGLSPDL-KNLDQIRNIARPV--DVPDQGLL 198 (346)
Q Consensus 127 i~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPlaaii~~-~il~vHgGi~p~~-~~le~i~~i~rp~--~~~~~~~~ 198 (346)
++..+|+.+++...++.. .|.. ..++|+.||+++++++ .++|.||++++.+ ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 455678888877777654 6766 9999999999999998 9999999999975 6788888887766 56667777
Q ss_pred hhhhhCCCCCC-CCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCC
Q 019125 199 CDLLWADPDKD-IEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCG 271 (346)
Q Consensus 199 ~dlLWsDP~~~-~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~ 271 (346)
.+.+|+++... ...|.++++|.+..| .+....|+..+..+.+.++|+.+..++.....+..+|.|++++||.
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~~ 155 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEecccccC
Confidence 77899999863 678999999998887 7889999988888889999999999999887768999999999973
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.09 E-value=3.9e-09 Score=91.91 Aligned_cols=63 Identities=17% Similarity=0.150 Sum_probs=48.8
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCC-CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
|++.++||+||++.++..+++..... ..+.++++||++ +.+++..+..+ ...++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 57999999999998877766655554 568899999999 46677666433 23599999999983
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=99.08 E-value=4.7e-10 Score=100.07 Aligned_cols=69 Identities=22% Similarity=0.331 Sum_probs=55.3
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCC--------cHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ--------SIETICLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~--------slevl~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
|++.++||+||++.++.++++.+...+.+.++++||++|+|++ +.+++..|.. ....+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~----~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNA----YADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHh----cCCceEEEccCCcch
Confidence 5799999999999999999988755567899999999999874 4556655533 234799999999975
Q ss_pred c
Q 019125 126 S 126 (346)
Q Consensus 126 ~ 126 (346)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.94 E-value=6.6e-09 Score=88.11 Aligned_cols=118 Identities=21% Similarity=0.241 Sum_probs=79.2
Q ss_pred cEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcH--HHHHHHHHHHHhcCCcEEEeCCCccccchhhhcC
Q 019125 55 PIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--ETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (346)
Q Consensus 55 ~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~sl--evl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~g 132 (346)
++.++||+||++. .....+.+.++++||+++++..+- +.+.++..++ . ..++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 4789999999987 122345678999999999986532 2333333221 2 236789999996421
Q ss_pred ChHHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCC
Q 019125 133 FYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEG 212 (346)
Q Consensus 133 f~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~ 212 (346)
.-+.+++++||.+.+.. +..+ +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~----------------------~~~~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL----------------------DLVS--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc----------------------cccc--c------
Confidence 11347999999542211 0000 0
Q ss_pred CccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeE
Q 019125 213 WGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 253 (346)
Q Consensus 213 ~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~ 253 (346)
....|.+.+.+++++.+.++++-||.-.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123677889999999999999999999988887
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.85 E-value=6.3e-08 Score=89.79 Aligned_cols=71 Identities=10% Similarity=0.190 Sum_probs=57.7
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
+++.+++|+||++..+.++++.......|.+|++||++++|+..-++..++..+. ..+..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 5799999999999999999987654566889999999999976666666665554 2345789999999975
No 40
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.80 E-value=6.2e-08 Score=78.74 Aligned_cols=118 Identities=26% Similarity=0.390 Sum_probs=86.2
Q ss_pred EEEcCCCCCHHHHHHHH--HhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCCh
Q 019125 57 KICGDVHGQFSDLLRLF--EYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (346)
Q Consensus 57 ~ViGDIHG~~~~L~~ll--~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~ 134 (346)
+++||+|+......... ........+.++++||+++.+....+........+......++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47899999999888765 33334556789999999999998887766544444456778999999999
Q ss_pred HHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCc
Q 019125 135 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 214 (346)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~ 214 (346)
++++|+.+.+...... +..
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~---------------------~~~--------- 88 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELS---------------------PDE--------- 88 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhc---------------------ccc---------
Confidence 8899998765321000 000
Q ss_pred cCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEE
Q 019125 215 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEF 254 (346)
Q Consensus 215 ~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~ 254 (346)
......+...+.+.+.+.++.||.-....+..
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 00567788889999999999999988666543
No 41
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.79 E-value=4.1e-08 Score=91.66 Aligned_cols=156 Identities=19% Similarity=0.233 Sum_probs=94.9
Q ss_pred cEEEEcCCCCCHHHHH-HHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhh---
Q 019125 55 PIKICGDVHGQFSDLL-RLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRI--- 130 (346)
Q Consensus 55 ~i~ViGDIHG~~~~L~-~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~--- 130 (346)
+|+++|||||++.... +.++.. ..|.++++||+++. +.+++..|..+ +..++.++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987642 344432 34789999999864 56666665443 3458999999998553200
Q ss_pred -----------------cC------------------------C-hHHHHHHhc-hhhHHhhchhhccCCceEEEcCcEE
Q 019125 131 -----------------YG------------------------F-YDECKRRFN-VRVWKTFTDCFNCLPVAALVDEKIL 167 (346)
Q Consensus 131 -----------------~g------------------------f-~~e~~~~~~-~~~~~~~~~~f~~LPlaaii~~~il 167 (346)
++ + ..++...|+ ...++.+..+++.++.+......||
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 0 125555563 3455667777888764433344799
Q ss_pred EecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCC----CceEEe
Q 019125 168 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHD----LDLICR 243 (346)
Q Consensus 168 ~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~----l~~IIR 243 (346)
+.|+++.... ++.+ +|. ...|.+. +..+|...+.+-+++.. .++++-
T Consensus 152 iaH~~~~G~g---~~~~--------------------~~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLG---SDAE--------------------DPC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCC---cccc--------------------ccc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 9999986532 1111 111 1223332 12467777766665544 789999
Q ss_pred eecccc
Q 019125 244 AHQVVE 249 (346)
Q Consensus 244 gH~~v~ 249 (346)
||---.
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 986543
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.67 E-value=1.6e-06 Score=77.51 Aligned_cols=125 Identities=18% Similarity=0.243 Sum_probs=79.2
Q ss_pred cEEEEcCCC-CCHH-----HHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchh
Q 019125 55 PIKICGDVH-GQFS-----DLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN 128 (346)
Q Consensus 55 ~i~ViGDIH-G~~~-----~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~ 128 (346)
.|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+ ...++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~----~~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTI----APDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhh----CCceEEEECCCCccc--
Confidence 478999999 6533 35555543 34578999999987 6777666544 225899999999741
Q ss_pred hhcCChHHHHHHhchhhHHhhchhhccCCceEEEc---CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCC
Q 019125 129 RIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWAD 205 (346)
Q Consensus 129 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsD 205 (346)
.||....++ .+++++||..-.. |
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~~--------------------------~-- 92 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVVP--------------------------W-- 92 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCCC--------------------------C--
Confidence 344443332 3899999842100 0
Q ss_pred CCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEecc
Q 019125 206 PDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSA 266 (346)
Q Consensus 206 P~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa 266 (346)
...+.+.++.++.+.+.+|.||+-.+.- +...+..++---|+
T Consensus 93 ------------------~~~~~~~~~~~~~~~dvii~GHTH~p~~-~~~~g~~viNPGSv 134 (178)
T cd07394 93 ------------------GDPDSLAALQRQLDVDILISGHTHKFEA-FEHEGKFFINPGSA 134 (178)
T ss_pred ------------------CCHHHHHHHHHhcCCCEEEECCCCcceE-EEECCEEEEECCCC
Confidence 0234566667778899999999997633 23333333434444
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.63 E-value=3.3e-07 Score=80.72 Aligned_cols=65 Identities=20% Similarity=0.216 Sum_probs=46.5
Q ss_pred EEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCc-HHHHHHHHHHHHhcCCcEEEeCCCccccc
Q 019125 56 IKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS-IETICLLLAYKVKYKENFFLLRGNHECAS 126 (346)
Q Consensus 56 i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~s-levl~lL~~lki~~p~~v~lLrGNHE~~~ 126 (346)
|.++||+||++..+.. ......+.|.+|+.||++++|... .+.+..+ + ..+..++.+.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l---~-~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLL---L-AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHH---H-hcCCCEEEEcCCCCCHH
Confidence 5789999999998876 333334567899999999998763 3333222 2 23556999999999754
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.58 E-value=3.2e-07 Score=80.21 Aligned_cols=67 Identities=25% Similarity=0.243 Sum_probs=48.0
Q ss_pred EEEEcCCCCCHHHHHHHH-HhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 019125 56 IKICGDVHGQFSDLLRLF-EYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 56 i~ViGDIHG~~~~L~~ll-~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
+.++||+|++...+...+ +.......+.++++||+++++....... ++ .....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~--~~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LL--LALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HH--HhhcCCccEEEeCCCcceE
Confidence 468999999988776655 2233345578899999999987665543 22 1223456799999999986
No 45
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.57 E-value=1.9e-06 Score=80.36 Aligned_cols=207 Identities=16% Similarity=0.205 Sum_probs=104.4
Q ss_pred CcEEEEcCCCCC------HHHHHHHHHhCCCCCCceEEEeccccCC--C-----CCcHHHHHHHHHHHHhcCCcEEEeCC
Q 019125 54 APIKICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDR--G-----KQSIETICLLLAYKVKYKENFFLLRG 120 (346)
Q Consensus 54 ~~i~ViGDIHG~------~~~L~~ll~~~g~~~~~~~vfLGDyVDR--G-----~~slevl~lL~~lki~~p~~v~lLrG 120 (346)
|++++++|+|.. ...+.+.++.. ....+.++++||++|. | +...+++.+|..++. .+..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 679999999954 23455555432 1345789999999985 2 234566666666642 3357999999
Q ss_pred CccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEc-CcEEEecCCCCCCCC-CHHHHhcccC-CCC-----C
Q 019125 121 NHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLK-NLDQIRNIAR-PVD-----V 192 (346)
Q Consensus 121 NHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGi~p~~~-~le~i~~i~r-p~~-----~ 192 (346)
|||..... ...+..+. .++.. |....++ .+++++||-.-+.-. .....+++-| |.- .
T Consensus 79 NHD~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~ 143 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLA 143 (241)
T ss_pred CCchhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHh
Confidence 99974321 11111121 11111 2222333 469999998654211 1122223222 100 0
Q ss_pred CCcchhhhhh--hCCCCCCCCCCccCC-CC-cccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCC
Q 019125 193 PDQGLLCDLL--WADPDKDIEGWGEND-RG-VSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPN 268 (346)
Q Consensus 193 ~~~~~~~dlL--WsDP~~~~~~~~~n~-rg-~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~ 268 (346)
.......++- |+.-+. ..+. +. .-....++++.+.+++.+.+.+|.||.-.+.=.....++.-++-.+-++
T Consensus 144 ~p~~~~~~ia~~~~~~s~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgd 218 (241)
T PRK05340 144 LPLSIRLRIAAKMRAKSK-----AANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGD 218 (241)
T ss_pred CCHHHHHHHHHHHHHHHH-----HhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCC
Confidence 0000000000 000000 0000 01 1123456788899999999999999997754333323331112222222
Q ss_pred CCCCCCCcEEEEEEcCCC
Q 019125 269 YCGEFDNAGAMMSVDDTL 286 (346)
Q Consensus 269 Y~~~~~N~ga~l~i~~~~ 286 (346)
. .+.+.++.++.+.
T Consensus 219 w----~~~~~~~~~~~~~ 232 (241)
T PRK05340 219 W----HEQGSVLKVDADG 232 (241)
T ss_pred C----CCCCeEEEEECCc
Confidence 2 2347788887764
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.50 E-value=1.7e-06 Score=73.24 Aligned_cols=107 Identities=17% Similarity=0.178 Sum_probs=74.5
Q ss_pred EEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHH
Q 019125 57 KICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 136 (346)
Q Consensus 57 ~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e 136 (346)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..+ ....++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 3899999998877777665 45568899999973 3445555443 1335899999999
Q ss_pred HHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCccC
Q 019125 137 CKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGEN 216 (346)
Q Consensus 137 ~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n 216 (346)
-+++++|+-+.+.. +++.
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-------------------------~~~~---------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-------------------------DGED---------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-------------------------Cccc----------
Confidence 37999997421100 0000
Q ss_pred CCCcccccCHHHHHHHHHhCCCceEEeeecccccCeE
Q 019125 217 DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 253 (346)
Q Consensus 217 ~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~ 253 (346)
...-|.+++.+++++.+.++++-||.-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356788899999999999999998876655
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.42 E-value=2.9e-06 Score=78.67 Aligned_cols=206 Identities=15% Similarity=0.143 Sum_probs=101.1
Q ss_pred EEEEcCCCCCH------HHHHHHHHhCCCCCCceEEEeccccCCC-----CC--cHHHHHHHHHHHHhcCCcEEEeCCCc
Q 019125 56 IKICGDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDRG-----KQ--SIETICLLLAYKVKYKENFFLLRGNH 122 (346)
Q Consensus 56 i~ViGDIHG~~------~~L~~ll~~~g~~~~~~~vfLGDyVDRG-----~~--slevl~lL~~lki~~p~~v~lLrGNH 122 (346)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++..++..++. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 234455544322 457899999999952 11 1244555555542 345799999999
Q ss_pred cccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEE-cCcEEEecCCCCCC-CCCHHHHhcccC-CC------CCC
Q 019125 123 ECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALV-DEKILCMHGGLSPD-LKNLDQIRNIAR-PV------DVP 193 (346)
Q Consensus 123 E~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii-~~~il~vHgGi~p~-~~~le~i~~i~r-p~------~~~ 193 (346)
|...-. ...+..+. .++.. +....+ +.+++++||-.-.. -....-.+++-| |. -.|
T Consensus 79 D~~~~~-------~~~~~~gi-------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAGM-------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCCC-------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 01111111 11211 112222 45899999975321 111111222211 10 000
Q ss_pred C--cchhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCC
Q 019125 194 D--QGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCG 271 (346)
Q Consensus 194 ~--~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~ 271 (346)
. ...+...+|+..... .. ...-.-....++.+++.+++.+.+++|.||.-.+.-+.+..++.-.+-.+-++.
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW-- 217 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-KQ---MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW-- 217 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-cC---CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC--
Confidence 0 111223333322110 00 000011234667889999999999999999977654443323322233333333
Q ss_pred CCCCcEEEEEEcCCC
Q 019125 272 EFDNAGAMMSVDDTL 286 (346)
Q Consensus 272 ~~~N~ga~l~i~~~~ 286 (346)
...+.++.+++++
T Consensus 218 --~~~~~~~~~~~~g 230 (231)
T TIGR01854 218 --YRQGSILRVDADG 230 (231)
T ss_pred --ccCCeEEEEcCCC
Confidence 1235667776653
No 48
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.40 E-value=7.1e-06 Score=69.73 Aligned_cols=118 Identities=24% Similarity=0.239 Sum_probs=73.8
Q ss_pred EEEEcCCCCCHH------H----HHHHHHhCCCCCCceEEEeccccCCCCCc-H-HHHHHHHHHHHhcCCcEEEeCCCcc
Q 019125 56 IKICGDVHGQFS------D----LLRLFEYGGYPPEANYLFLGDYVDRGKQS-I-ETICLLLAYKVKYKENFFLLRGNHE 123 (346)
Q Consensus 56 i~ViGDIHG~~~------~----L~~ll~~~g~~~~~~~vfLGDyVDRG~~s-l-evl~lL~~lki~~p~~v~lLrGNHE 123 (346)
++.++|+|=... . |.++++.......+.++++||+++.|... . +...++-.++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 1 22344444444567899999999998742 1 2222333222111 27999999999
Q ss_pred ccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhh
Q 019125 124 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLW 203 (346)
Q Consensus 124 ~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLW 203 (346)
. ++++|..+.+.-.
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~------------------------- 93 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPG------------------------- 93 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCc-------------------------
Confidence 7 8889976643210
Q ss_pred CCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEE
Q 019125 204 ADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEF 254 (346)
Q Consensus 204 sDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~ 254 (346)
.+.... . +.+.+.+++++.++++++.||.-.+..+.+
T Consensus 94 --------~~~~~~-----~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 94 --------SGRERL-----L-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred --------cccccC-----C-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 000000 1 567789999999999999999988655543
No 49
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.19 E-value=7.6e-05 Score=66.60 Aligned_cols=160 Identities=18% Similarity=0.137 Sum_probs=97.5
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCC
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF 133 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf 133 (346)
|++.|+||.||...+..+..+.......+.++.+||++....... +.-....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~~--------l~~~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLDA--------LEGGLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchHH--------hhcccccceEEEEccCCCcccc-----
Confidence 679999999999976666666666666788999999998654321 1100256899999999986432
Q ss_pred hHHHHHHhchhhHHhhchhhccCCceE--EEc-CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCC
Q 019125 134 YDECKRRFNVRVWKTFTDCFNCLPVAA--LVD-EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI 210 (346)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~f~~LPlaa--ii~-~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~ 210 (346)
..+|-.. .++ -+++++||..-. .
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~-~--------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYF-V--------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCccc-c---------------------------------
Confidence 1222222 223 489999996532 1
Q ss_pred CCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCC-CceE
Q 019125 211 EGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDT-LTCS 289 (346)
Q Consensus 211 ~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~-~~~~ 289 (346)
......++.+-+..+.+.+|.||+-.+. ++...+-.++-=-|.+.+-+. +..+++.++.+ ..+.
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~-~~~~~~i~~vNPGS~s~pr~~--~~~sy~il~~~~~~~~ 159 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPV-AEKVGGILLVNPGSVSGPRGG--NPASYAILDVDNLEVE 159 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCccc-EEEECCEEEEcCCCcCCCCCC--CCcEEEEEEcCCCEEE
Confidence 1223456667777889999999998753 222222112222344544332 44455555544 4555
Q ss_pred EEEeec
Q 019125 290 FQILKA 295 (346)
Q Consensus 290 ~~~~~p 295 (346)
...++.
T Consensus 160 ~~~~~~ 165 (172)
T COG0622 160 VLFLER 165 (172)
T ss_pred EEEeec
Confidence 555544
No 50
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.16 E-value=0.00015 Score=66.58 Aligned_cols=70 Identities=21% Similarity=0.155 Sum_probs=42.3
Q ss_pred cEEEEcCCCCC----HHHH----HHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHh--cCCcEEEeCCCccc
Q 019125 55 PIKICGDVHGQ----FSDL----LRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVK--YKENFFLLRGNHEC 124 (346)
Q Consensus 55 ~i~ViGDIHG~----~~~L----~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~--~p~~v~lLrGNHE~ 124 (346)
+++++||+|-- ...+ ..+.+...-...+.++++||++|.+....+--.+.-.++.. .+-.++.++||||.
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~ 81 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDL 81 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcc
Confidence 57899999952 2223 23334433334577899999999998433222222222222 23458899999994
No 51
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.09 E-value=0.00015 Score=68.86 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=48.4
Q ss_pred cCcEEEEcCCC-C-----------CHHHHHHHHHhCCC--CCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEe
Q 019125 53 EAPIKICGDVH-G-----------QFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLL 118 (346)
Q Consensus 53 ~~~i~ViGDIH-G-----------~~~~L~~ll~~~g~--~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lL 118 (346)
..+++.++|+| . ....|.++++.+.. +..+-+|+.||+++.|. .+-+..+...-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 36799999999 1 24667777776532 23577899999999874 333333333323345679999
Q ss_pred CCCcccc
Q 019125 119 RGNHECA 125 (346)
Q Consensus 119 rGNHE~~ 125 (346)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.08 E-value=8.3e-06 Score=77.52 Aligned_cols=70 Identities=21% Similarity=0.112 Sum_probs=50.7
Q ss_pred CcEEEEcCCCCC----HHHHHHHHHhCCCCCCceEEEeccccCCC-CCc-HHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 019125 54 APIKICGDVHGQ----FSDLLRLFEYGGYPPEANYLFLGDYVDRG-KQS-IETICLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 54 ~~i~ViGDIHG~----~~~L~~ll~~~g~~~~~~~vfLGDyVDRG-~~s-levl~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
.++.+++|+|.. ...+.++++...-...|-++++||++|++ +.. -++...|..++.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 579999999976 55677777765555567899999999954 223 3455556556543 3599999999974
No 53
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.02 E-value=1.1e-05 Score=73.47 Aligned_cols=71 Identities=25% Similarity=0.187 Sum_probs=52.0
Q ss_pred CcEEEEcCCCCCHH----HHHHHHHhCCCCCCceEEEeccccCCCCCcH-HHHHHHHHHHHhcCCcEEEeCCCccccc
Q 019125 54 APIKICGDVHGQFS----DLLRLFEYGGYPPEANYLFLGDYVDRGKQSI-ETICLLLAYKVKYKENFFLLRGNHECAS 126 (346)
Q Consensus 54 ~~i~ViGDIHG~~~----~L~~ll~~~g~~~~~~~vfLGDyVDRG~~sl-evl~lL~~lki~~p~~v~lLrGNHE~~~ 126 (346)
+++.+++|+|+... .+.++++.+.....+.+++.||++|.+.... ++..++..+ ..+..++.+.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l--~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKL--KAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhcc--CCCCCEEEECCCccccc
Confidence 57999999998743 6677776655445578899999999988765 444444333 23457999999999854
No 54
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.94 E-value=0.00033 Score=63.09 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=45.1
Q ss_pred CcEEEEcCCCCCHH-----------HHHHHHH-hCCCCCCceEEEeccccCCCCCc---HHHHHHHHHHHHhcCCcEEEe
Q 019125 54 APIKICGDVHGQFS-----------DLLRLFE-YGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVKYKENFFLL 118 (346)
Q Consensus 54 ~~i~ViGDIHG~~~-----------~L~~ll~-~~g~~~~~~~vfLGDyVDRG~~s---levl~lL~~lki~~p~~v~lL 118 (346)
.++.+++|+|--.. ...+.++ .......+.+|++||+++.+... .+.+..++.......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46899999996221 1122222 22233457899999999977653 555555554433345578999
Q ss_pred CCCcc
Q 019125 119 RGNHE 123 (346)
Q Consensus 119 rGNHE 123 (346)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 55
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.93 E-value=0.0005 Score=64.49 Aligned_cols=71 Identities=13% Similarity=0.017 Sum_probs=43.5
Q ss_pred cEEEEcCCCCCH----------------HHHHHHHHhCCC--CCCceEEEeccccCCCCCcH---HHHHHH-HHHHHh-c
Q 019125 55 PIKICGDVHGQF----------------SDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSI---ETICLL-LAYKVK-Y 111 (346)
Q Consensus 55 ~i~ViGDIHG~~----------------~~L~~ll~~~g~--~~~~~~vfLGDyVDRG~~sl---evl~lL-~~lki~-~ 111 (346)
.++++||+|--. ..|.++++.+.. +..+.++++||+++.|...- +....+ -.++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 467888888663 134555665432 24567889999999987541 111111 112211 2
Q ss_pred CCcEEEeCCCcccc
Q 019125 112 KENFFLLRGNHECA 125 (346)
Q Consensus 112 p~~v~lLrGNHE~~ 125 (346)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999984
No 56
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.84 E-value=3.6e-05 Score=71.53 Aligned_cols=68 Identities=21% Similarity=0.167 Sum_probs=48.7
Q ss_pred cEEEEcCCCCCH------HHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 019125 55 PIKICGDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 55 ~i~ViGDIHG~~------~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
++.+++|+|+++ ..+.++++.+.-...+.+++.||++++.+.+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999763 22556666554445678999999999876666655544432 345799999999975
No 57
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.80 E-value=2.5e-06 Score=85.66 Aligned_cols=235 Identities=11% Similarity=-0.013 Sum_probs=163.5
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCceecc----CcEEEEcCCCCCHHHHHHHHHhCCCCCC-ceEEEeccccCCCCCcHH
Q 019125 25 VQLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIE 99 (346)
Q Consensus 25 ~~l~~~~i~~l~~~a~~il~~ep~ll~l~----~~i~ViGDIHG~~~~L~~ll~~~g~~~~-~~~vfLGDyVDRG~~sle 99 (346)
..|...++..++..+.+.+..+|+...+. .-.+.++|.||.+.|+.+.++.- |.. .-|++-|++++++.+..+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 35777899999999999999999888874 24788999999999999998864 333 349999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhch---hhHHhhchhhccCCceEEEcCcEEEecCCCCCC
Q 019125 100 TICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV---RVWKTFTDCFNCLPVAALVDEKILCMHGGLSPD 176 (346)
Q Consensus 100 vl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~ 176 (346)
.+..+...+...|+...+.|++||+..+...++|..+....++. .....+...+.. |++....+.++=-| -+
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~le~~-kv--- 165 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPVLEDH-KV--- 165 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCcccccc-hh---
Confidence 99999999999999999999999999988888888777666532 222222222222 14444443222222 11
Q ss_pred CCCHHHHhcc-----------------------------cCCCCCCCcchhhhhhhCCCCCCCCCCccCCCCcccccCHH
Q 019125 177 LKNLDQIRNI-----------------------------ARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGAD 227 (346)
Q Consensus 177 ~~~le~i~~i-----------------------------~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~ 227 (346)
+.+.+... ..+++. ..-.+..|+++......+-...++.+...+++
T Consensus 166 --t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~---~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps 240 (476)
T KOG0376|consen 166 --TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEI---SVPGDVKISVCGDTHGQFYDLLNIFELNGLPS 240 (476)
T ss_pred --hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEe---ecCCCceEEecCCccccccchhhhHhhcCCCC
Confidence 12211111 111111 13456788888765455556667777778888
Q ss_pred HHHHHHHhCCCceEEeeecccc------------cCeEEecC---CeEEEEeccCCCCC
Q 019125 228 KVVEFLQKHDLDLICRAHQVVE------------DGYEFFAK---RQLVTVFSAPNYCG 271 (346)
Q Consensus 228 ~~~~fl~~~~l~~IIRgH~~v~------------~G~~~~~~---~~~iTiFSa~~Y~~ 271 (346)
....||...++.-+.+.|.-+. .+|-..++ +.++++|+++.+|-
T Consensus 241 ~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 241 ETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 8999999999988888886532 22222222 24889999998874
No 58
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.74 E-value=8e-05 Score=70.19 Aligned_cols=72 Identities=21% Similarity=0.194 Sum_probs=49.1
Q ss_pred CcEEEEcCCCC-C-----------HHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHH----HHHHHHHhcCCcEEE
Q 019125 54 APIKICGDVHG-Q-----------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETIC----LLLAYKVKYKENFFL 117 (346)
Q Consensus 54 ~~i~ViGDIHG-~-----------~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~----lL~~lki~~p~~v~l 117 (346)
|+++.++|+|- . +..|.++++.+.-...+.+++.||++|+...+.+... ++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 2345556555444456789999999999876655433 333333333357999
Q ss_pred eCCCcccc
Q 019125 118 LRGNHECA 125 (346)
Q Consensus 118 LrGNHE~~ 125 (346)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 59
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.68 E-value=0.00012 Score=69.14 Aligned_cols=73 Identities=21% Similarity=0.202 Sum_probs=49.0
Q ss_pred cEEEEcCCC-C------------CHHHHHHHHHhCCCCCCceEEEeccccCCCCC-cHHHHHHHHHHHHhcCCcEEEeCC
Q 019125 55 PIKICGDVH-G------------QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ-SIETICLLLAYKVKYKENFFLLRG 120 (346)
Q Consensus 55 ~i~ViGDIH-G------------~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~-slevl~lL~~lki~~p~~v~lLrG 120 (346)
++.+++|+| + ....+.++++.+.....+-+|++||+++.|.. +.+-+..+...-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 578999999 2 24566777776654446789999999998873 223333333322233457999999
Q ss_pred Cccccch
Q 019125 121 NHECASI 127 (346)
Q Consensus 121 NHE~~~i 127 (346)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 60
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.67 E-value=8.8e-05 Score=72.87 Aligned_cols=73 Identities=23% Similarity=0.351 Sum_probs=49.7
Q ss_pred CcEEEEcCCC-C-----------CHHHHHHHHHhCCCCCCceEEEeccccCCC-CCcHHHHHHHHH--HHH--hcCCcEE
Q 019125 54 APIKICGDVH-G-----------QFSDLLRLFEYGGYPPEANYLFLGDYVDRG-KQSIETICLLLA--YKV--KYKENFF 116 (346)
Q Consensus 54 ~~i~ViGDIH-G-----------~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG-~~slevl~lL~~--lki--~~p~~v~ 116 (346)
|+++.+||+| | +...|.++++.+.-...+.+++.||++|+. +.+.+++.++.. ++. ..+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5789999999 4 234456666655555568899999999985 455555444433 222 2345799
Q ss_pred EeCCCccccc
Q 019125 117 LLRGNHECAS 126 (346)
Q Consensus 117 lLrGNHE~~~ 126 (346)
++.||||...
T Consensus 81 ~I~GNHD~~~ 90 (340)
T PHA02546 81 VLVGNHDMYY 90 (340)
T ss_pred EEccCCCccc
Confidence 9999999743
No 61
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.64 E-value=0.0016 Score=60.82 Aligned_cols=73 Identities=19% Similarity=0.169 Sum_probs=52.3
Q ss_pred CcEEEEcCCCCC------HHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHH--HhcCCcEEEeCCCcccc
Q 019125 54 APIKICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYK--VKYKENFFLLRGNHECA 125 (346)
Q Consensus 54 ~~i~ViGDIHG~------~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lk--i~~p~~v~lLrGNHE~~ 125 (346)
++++.|+|+|-- ...+.++++.....+.|-+|+.||+.+.|. .+-...+..+- ...+..++.++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468899999977 344566667777666689999999999963 22223332222 36688899999999998
Q ss_pred chh
Q 019125 126 SIN 128 (346)
Q Consensus 126 ~i~ 128 (346)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 665
No 62
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.60 E-value=0.00023 Score=62.73 Aligned_cols=67 Identities=25% Similarity=0.354 Sum_probs=43.5
Q ss_pred EEEEcCCCCCHHHH---------------HHHHHhCC--CCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEe
Q 019125 56 IKICGDVHGQFSDL---------------LRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLL 118 (346)
Q Consensus 56 i~ViGDIHG~~~~L---------------~~ll~~~g--~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lL 118 (346)
+++++|+|=..... .++++... ..+.+.++++||++++|..+.. +.++.+ .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 36889998655432 12233221 2346889999999999986643 333332 34579999
Q ss_pred CCCccccch
Q 019125 119 RGNHECASI 127 (346)
Q Consensus 119 rGNHE~~~i 127 (346)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997643
No 63
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.54 E-value=0.00021 Score=64.68 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=22.3
Q ss_pred CHHHHHHHHHhCCCceEEeeecccccCeE
Q 019125 225 GADKVVEFLQKHDLDLICRAHQVVEDGYE 253 (346)
Q Consensus 225 G~~~~~~fl~~~~l~~IIRgH~~v~~G~~ 253 (346)
.+..+.+.++..+.+.+|.||.-.+.-.+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 45667777889999999999998754333
No 64
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.52 E-value=0.00033 Score=64.40 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=46.0
Q ss_pred cEEEEcCCCCC------------HHHHHHHHHhCCC--CCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCC
Q 019125 55 PIKICGDVHGQ------------FSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRG 120 (346)
Q Consensus 55 ~i~ViGDIHG~------------~~~L~~ll~~~g~--~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrG 120 (346)
++++++|+|=. ...|.++++.+.- +..+-+|++||+++.|... ....+.......+..++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 57899999944 3456777775543 2567899999999987532 222222222223567999999
Q ss_pred Ccccc
Q 019125 121 NHECA 125 (346)
Q Consensus 121 NHE~~ 125 (346)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 65
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.51 E-value=0.00033 Score=61.94 Aligned_cols=58 Identities=19% Similarity=0.134 Sum_probs=34.5
Q ss_pred HHHHHHhCCCCCCceEEEeccccCCCCCcH-HHHHHH-HHHHHhcCCcEEEeCCCccccc
Q 019125 69 LLRLFEYGGYPPEANYLFLGDYVDRGKQSI-ETICLL-LAYKVKYKENFFLLRGNHECAS 126 (346)
Q Consensus 69 L~~ll~~~g~~~~~~~vfLGDyVDRG~~sl-evl~lL-~~lki~~p~~v~lLrGNHE~~~ 126 (346)
+.++.+.+...+.+.++++||++|...... +....+ +......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444443345688999999998654332 211111 1122234558999999999853
No 66
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.47 E-value=0.00062 Score=70.44 Aligned_cols=114 Identities=18% Similarity=0.219 Sum_probs=60.5
Q ss_pred cCcEEEEcCCC-CCH----HHHHHHHHhCC-C--------CCCceEEEeccccCC-CCCc---------------HHHHH
Q 019125 53 EAPIKICGDVH-GQF----SDLLRLFEYGG-Y--------PPEANYLFLGDYVDR-GKQS---------------IETIC 102 (346)
Q Consensus 53 ~~~i~ViGDIH-G~~----~~L~~ll~~~g-~--------~~~~~~vfLGDyVDR-G~~s---------------levl~ 102 (346)
+..+++++|+| |.. ..+..+++... . ...+.+|++||++|. |.++ -++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35689999999 653 23444444332 2 223689999999995 3221 12333
Q ss_pred HHHHHHHhcCCcEEEeCCCccccchhhhc-CChHHHHHHhchhhHHhhchhhccCCceEEEcC-cEEEecCCC
Q 019125 103 LLLAYKVKYKENFFLLRGNHECASINRIY-GFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGL 173 (346)
Q Consensus 103 lL~~lki~~p~~v~lLrGNHE~~~i~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~-~il~vHgGi 173 (346)
+|..+. ..-.|++++||||........ .+..++...+.. .-..++.. |....+++ +++++||-.
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~----~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE----HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcCc----CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 343332 234799999999986533221 222222111111 11233333 55444444 789999853
No 67
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.44 E-value=0.00034 Score=63.17 Aligned_cols=74 Identities=24% Similarity=0.299 Sum_probs=50.2
Q ss_pred cEEEEcCCC-CC--------------HHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhc---CCcEE
Q 019125 55 PIKICGDVH-GQ--------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKY---KENFF 116 (346)
Q Consensus 55 ~i~ViGDIH-G~--------------~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~---p~~v~ 116 (346)
+++.++|+| |. +..|.++++.+.....+.+++.||++|....+.+.+..+...-... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 478899999 32 2236666666555556789999999998876655444443332222 45799
Q ss_pred EeCCCccccchh
Q 019125 117 LLRGNHECASIN 128 (346)
Q Consensus 117 lLrGNHE~~~i~ 128 (346)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999986543
No 68
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.43 E-value=0.017 Score=53.49 Aligned_cols=204 Identities=18% Similarity=0.201 Sum_probs=116.5
Q ss_pred cCcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEecccc--CCCCCcHHHHHH--HHHHHHhcCCcEEEeCCCccccchh
Q 019125 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYV--DRGKQSIETICL--LLAYKVKYKENFFLLRGNHECASIN 128 (346)
Q Consensus 53 ~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyV--DRG~~slevl~l--L~~lki~~p~~v~lLrGNHE~~~i~ 128 (346)
.+++..+.|+||.++.+.++++.+.....+.+++.||+. +.|+.-. +..+ +-.++ .+-..++.+.||.|...+-
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~-~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEV-AEELNKLEALK-ELGIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHH-HHhhhHHHHHH-hcCCeEEEEcCCCChHHHH
Confidence 478999999999999999999988877778899999999 7776432 2222 23333 3456899999998886543
Q ss_pred hhcCChHHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCC-C-----CHHHHhcccCCC-CCCCcchhhhh
Q 019125 129 RIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDL-K-----NLDQIRNIARPV-DVPDQGLLCDL 201 (346)
Q Consensus 129 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~-~-----~le~i~~i~rp~-~~~~~~~~~dl 201 (346)
. .....+..+.. -..-+++=-||-=||..|.. . +-++|....+.. +...+ ...=+
T Consensus 81 ~-------~l~~~~~~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~-~~~Il 142 (226)
T COG2129 81 D-------VLKNAGVNVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN-PVNIL 142 (226)
T ss_pred H-------HHHhccccccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC-cceEE
Confidence 2 11112221111 11123333445557776532 1 233333222110 00000 00000
Q ss_pred hhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEE
Q 019125 202 LWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMS 281 (346)
Q Consensus 202 LWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~ 281 (346)
+.--|.-... ..++-| -.--|..+++++.++.+-.+.+.||=--..|++.-.+ ||+-.|.-.+ .-..|++.
T Consensus 143 ~~HaPP~gt~--~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~ 213 (226)
T COG2129 143 LTHAPPYGTL--LDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIE 213 (226)
T ss_pred EecCCCCCcc--ccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEE
Confidence 1111111000 001222 1245899999999999999999999776778876443 5666664432 35668888
Q ss_pred EcCC
Q 019125 282 VDDT 285 (346)
Q Consensus 282 i~~~ 285 (346)
++++
T Consensus 214 l~~~ 217 (226)
T COG2129 214 LEKE 217 (226)
T ss_pred ecCc
Confidence 8777
No 69
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.41 E-value=0.00032 Score=66.62 Aligned_cols=70 Identities=19% Similarity=0.296 Sum_probs=45.4
Q ss_pred EEEEcCCCCCHHHHHHHHHh---CCCCCCceEEEeccccCCCCC-cHHHHH------HHH---HH---HHhcCCcEEEeC
Q 019125 56 IKICGDVHGQFSDLLRLFEY---GGYPPEANYLFLGDYVDRGKQ-SIETIC------LLL---AY---KVKYKENFFLLR 119 (346)
Q Consensus 56 i~ViGDIHG~~~~L~~ll~~---~g~~~~~~~vfLGDyVDRG~~-slevl~------lL~---~l---ki~~p~~v~lLr 119 (346)
|+|+||+||+++.+.+.++. -...+.+-+|++||+-..+.. ..+.+. -+. ++ ....|--++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 58999999999988764443 233566889999999754433 333221 111 11 223566689999
Q ss_pred CCcccc
Q 019125 120 GNHECA 125 (346)
Q Consensus 120 GNHE~~ 125 (346)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 70
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.39 E-value=0.0017 Score=60.49 Aligned_cols=198 Identities=16% Similarity=0.228 Sum_probs=102.8
Q ss_pred EEcCCCCC------HHHHHHHHHhCCCCCCceEEEeccccCC--CCC-c----HHHHHHHHHHHHhcCCcEEEeCCCccc
Q 019125 58 ICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDR--GKQ-S----IETICLLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 58 ViGDIHG~------~~~L~~ll~~~g~~~~~~~vfLGDyVDR--G~~-s----levl~lL~~lki~~p~~v~lLrGNHE~ 124 (346)
+|+|+|=. -+.|.+.|+... +..+.++++||++|- |.. . -+|...|..+ .....+++.+.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchHH
Confidence 68999854 334556666543 255789999999973 333 1 2333333322 2346789999999995
Q ss_pred cchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEE---cCcEEEecCCCC-CCCCC-----------HHHHhcccCC
Q 019125 125 ASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALV---DEKILCMHGGLS-PDLKN-----------LDQIRNIARP 189 (346)
Q Consensus 125 ~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii---~~~il~vHgGi~-p~~~~-----------le~i~~i~rp 189 (346)
..-+ .++ ... .-+.-+|-..++ +++++++||-.- +.... +.+..-+..|
T Consensus 80 ll~~-~f~------~~~---------g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl~ 143 (237)
T COG2908 80 LLGK-RFA------QEA---------GGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNLP 143 (237)
T ss_pred HHHH-HHH------hhc---------CceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHhH
Confidence 4222 110 111 112334444333 468999999652 11100 0111111111
Q ss_pred CCCCCcchhhhhhhCCCCCCCCCCccCCCCcc---cccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEecc
Q 019125 190 VDVPDQGLLCDLLWADPDKDIEGWGENDRGVS---YTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSA 266 (346)
Q Consensus 190 ~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~~---~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa 266 (346)
+. -. .-+..=+|+.- .|........ ....+.++.+-++++|++.+|.||.-.+..-....-.+|.
T Consensus 144 l~-~R-~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~----- 211 (237)
T COG2908 144 LR-VR-RRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN----- 211 (237)
T ss_pred HH-HH-HHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe-----
Confidence 11 00 00112244443 1222211111 1245778888999999999999999876554443211111
Q ss_pred CCCCCCCCCcEEEEEEcCCCce
Q 019125 267 PNYCGEFDNAGAMMSVDDTLTC 288 (346)
Q Consensus 267 ~~Y~~~~~N~ga~l~i~~~~~~ 288 (346)
||.....|++++++.+...
T Consensus 212 ---lGdW~~~~s~~~v~~~~~~ 230 (237)
T COG2908 212 ---LGDWVSEGSILEVDDGGLE 230 (237)
T ss_pred ---cCcchhcceEEEEecCcEE
Confidence 2333467789999887543
No 71
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.38 E-value=0.0016 Score=56.98 Aligned_cols=47 Identities=26% Similarity=0.277 Sum_probs=29.7
Q ss_pred CCceEEEeccccCCCCCc-HHHH-HHHHHHHHh---c-CCcEEEeCCCccccc
Q 019125 80 PEANYLFLGDYVDRGKQS-IETI-CLLLAYKVK---Y-KENFFLLRGNHECAS 126 (346)
Q Consensus 80 ~~~~~vfLGDyVDRG~~s-levl-~lL~~lki~---~-p~~v~lLrGNHE~~~ 126 (346)
..+.++++||++|.+... .+.. ..+..++.. . ...++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 457899999999987643 2222 222222222 1 346999999999753
No 72
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.38 E-value=0.00044 Score=69.68 Aligned_cols=72 Identities=24% Similarity=0.294 Sum_probs=47.2
Q ss_pred CcEEEEcCCC-CC-H------HH----HHHHHHhCCCCCCceEEEeccccCCCCCcHHHHH----HHHHHHHhcCCcEEE
Q 019125 54 APIKICGDVH-GQ-F------SD----LLRLFEYGGYPPEANYLFLGDYVDRGKQSIETIC----LLLAYKVKYKENFFL 117 (346)
Q Consensus 54 ~~i~ViGDIH-G~-~------~~----L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~----lL~~lki~~p~~v~l 117 (346)
|+++.++|+| |. + .+ |.++.+.+.....+.+|+.||++|++..+.+... ++..|+. .+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 5789999999 42 1 11 3344444444556889999999999876654432 2333332 2456999
Q ss_pred eCCCccccc
Q 019125 118 LRGNHECAS 126 (346)
Q Consensus 118 LrGNHE~~~ 126 (346)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999853
No 73
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.31 E-value=0.0012 Score=68.72 Aligned_cols=70 Identities=20% Similarity=0.249 Sum_probs=49.3
Q ss_pred CHHHHHHHHHhCCCc----eEEeeecccc--cCeEE-ecCCeEEEE---eccCCCCCCCCCcEEEEEEcCCCceEEEEee
Q 019125 225 GADKVVEFLQKHDLD----LICRAHQVVE--DGYEF-FAKRQLVTV---FSAPNYCGEFDNAGAMMSVDDTLTCSFQILK 294 (346)
Q Consensus 225 G~~~~~~fl~~~~l~----~IIRgH~~v~--~G~~~-~~~~~~iTi---FSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~ 294 (346)
.++..++.|+..|++ .||-||.||. +|=.. -++|+++.| ||.. |....+=+|=.| |.+.-.......+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTL-iyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTL-IYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEE-EecCCcceeccCC
Confidence 567788899999998 9999999987 67543 589999999 5654 655555455555 4444444555555
Q ss_pred cC
Q 019125 295 AS 296 (346)
Q Consensus 295 p~ 296 (346)
|-
T Consensus 585 pF 586 (640)
T PF06874_consen 585 PF 586 (640)
T ss_pred CC
Confidence 54
No 74
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.26 E-value=0.00094 Score=62.05 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=43.4
Q ss_pred CcEEEEcCCC-CCHHH----------------HHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEE
Q 019125 54 APIKICGDVH-GQFSD----------------LLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFF 116 (346)
Q Consensus 54 ~~i~ViGDIH-G~~~~----------------L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~ 116 (346)
.++.||+|+| |--.. |.++.+.......+.++++||+++..... .....+.++.......++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~-~~~~~~~~~l~~~~~~v~ 93 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKG-LEWRFIREFIEVTFRDLI 93 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCCh-HHHHHHHHHHHhcCCcEE
Confidence 5789999999 54322 22333333334457899999999765543 222222211111234799
Q ss_pred EeCCCccccc
Q 019125 117 LLRGNHECAS 126 (346)
Q Consensus 117 lLrGNHE~~~ 126 (346)
+++||||...
T Consensus 94 ~V~GNHD~~~ 103 (225)
T TIGR00024 94 LIRGNHDALI 103 (225)
T ss_pred EECCCCCCcc
Confidence 9999999754
No 75
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.21 E-value=0.0011 Score=66.87 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=57.5
Q ss_pred CcEEEEcCCCCC------------HHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHh-----------
Q 019125 54 APIKICGDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVK----------- 110 (346)
Q Consensus 54 ~~i~ViGDIHG~------------~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~----------- 110 (346)
+++.+++|+|-- +..|.++++.+.-...|-+|+.||++|++.-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 689999999942 557788888876666788999999999999999888665554332
Q ss_pred -------------------------cCCcEEEeCCCccccc
Q 019125 111 -------------------------YKENFFLLRGNHECAS 126 (346)
Q Consensus 111 -------------------------~p~~v~lLrGNHE~~~ 126 (346)
..-.||.+-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1337999999999964
No 76
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.12 E-value=0.0013 Score=62.44 Aligned_cols=70 Identities=17% Similarity=0.150 Sum_probs=41.1
Q ss_pred CcEEEEcCCCC----CHHHHHHHHHhCCCCCCceEEEeccccCCCCCc----HHH-HHHHHHHHHhcCCcEEEeCCCccc
Q 019125 54 APIKICGDVHG----QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS----IET-ICLLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 54 ~~i~ViGDIHG----~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~s----lev-l~lL~~lki~~p~~v~lLrGNHE~ 124 (346)
-+++|+||.|. +...+.++.+. ....+-++++||+++-+... .+. +..+-.+ ...-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPL--ASYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHH--HhcCCcEEcCccccc
Confidence 46899999995 23333334333 23456788999999644322 222 2222212 123458999999998
Q ss_pred cch
Q 019125 125 ASI 127 (346)
Q Consensus 125 ~~i 127 (346)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 77
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.92 E-value=0.002 Score=59.71 Aligned_cols=46 Identities=4% Similarity=-0.127 Sum_probs=31.6
Q ss_pred cCHHHHHHHHHhCCCceEEeeecccccCeE---EecCCeEEEEeccCCCCC
Q 019125 224 FGADKVVEFLQKHDLDLICRAHQVVEDGYE---FFAKRQLVTVFSAPNYCG 271 (346)
Q Consensus 224 FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~---~~~~~~~iTiFSa~~Y~~ 271 (346)
++...+.+.+++.++++++-||.-...-.. ...+| |+.+++|+=|-
T Consensus 180 ~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~~ 228 (232)
T cd07393 180 GDDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADYL 228 (232)
T ss_pred CCHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchhc
Confidence 356677888899999999999987643322 12444 66777776554
No 78
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.81 E-value=0.0027 Score=59.82 Aligned_cols=71 Identities=23% Similarity=0.139 Sum_probs=42.2
Q ss_pred EEEEcCCCCCHH------HH-HHHHHhCCCCCCceEEEeccccCCCCCc-------HHHH-HHHHHHHH---hcCCcEEE
Q 019125 56 IKICGDVHGQFS------DL-LRLFEYGGYPPEANYLFLGDYVDRGKQS-------IETI-CLLLAYKV---KYKENFFL 117 (346)
Q Consensus 56 i~ViGDIHG~~~------~L-~~ll~~~g~~~~~~~vfLGDyVDRG~~s-------levl-~lL~~lki---~~p~~v~l 117 (346)
++.++|+|-... .. ..+++.+.....+-+|++||++|++... .+-. .++-.++. ..+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 567899996321 12 2234444344457889999999986531 1111 22222222 23567999
Q ss_pred eCCCccccc
Q 019125 118 LRGNHECAS 126 (346)
Q Consensus 118 LrGNHE~~~ 126 (346)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 79
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.75 E-value=0.011 Score=56.79 Aligned_cols=72 Identities=22% Similarity=0.224 Sum_probs=48.5
Q ss_pred CcEEEEcCCCCCHHH--HHHHHHhCCCCCCceEEEeccccCC-CCCcHHHH-HHHHHHHHhcCCcEEEeCCCccccch
Q 019125 54 APIKICGDVHGQFSD--LLRLFEYGGYPPEANYLFLGDYVDR-GKQSIETI-CLLLAYKVKYKENFFLLRGNHECASI 127 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~--L~~ll~~~g~~~~~~~vfLGDyVDR-G~~slevl-~lL~~lki~~p~~v~lLrGNHE~~~i 127 (346)
-+++-++|+|-.... ..+.+........|-+++.|||+|+ .+.+.+.+ ..|.. ++.|-.+|.+-||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~--L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAK--LKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHh--hhccCCEEEEecccccccc
Confidence 468999999987655 2233333333333888999999996 55555544 44443 3467789999999988644
No 80
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.40 E-value=0.011 Score=54.93 Aligned_cols=68 Identities=19% Similarity=0.247 Sum_probs=38.3
Q ss_pred EEEcCCC--CCH---HHHHHHHHhC-CCC----CCceEEEeccccCCCCC------------cHH----HHHHHHHHHHh
Q 019125 57 KICGDVH--GQF---SDLLRLFEYG-GYP----PEANYLFLGDYVDRGKQ------------SIE----TICLLLAYKVK 110 (346)
Q Consensus 57 ~ViGDIH--G~~---~~L~~ll~~~-g~~----~~~~~vfLGDyVDRG~~------------sle----vl~lL~~lki~ 110 (346)
++++|+| +.. ..+..+++.. +.. ..+.+|++||++|+... ..+ +..++-.+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 5799999 331 2223333332 222 23789999999998310 011 222222221
Q ss_pred cCCcEEEeCCCccccc
Q 019125 111 YKENFFLLRGNHECAS 126 (346)
Q Consensus 111 ~p~~v~lLrGNHE~~~ 126 (346)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2357999999999853
No 81
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.38 E-value=0.0087 Score=52.45 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=44.3
Q ss_pred cEEEEcCCCCC------------HHHHHHH-HHhC--CCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeC
Q 019125 55 PIKICGDVHGQ------------FSDLLRL-FEYG--GYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLR 119 (346)
Q Consensus 55 ~i~ViGDIHG~------------~~~L~~l-l~~~--g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLr 119 (346)
.++++||.|=. .+..... +... -..|+|.+.+|||+.-.-...-+...++-+| +.++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 36888998843 3333222 2211 1346788999999986554444444433333 78899999
Q ss_pred CCccccchhh
Q 019125 120 GNHECASINR 129 (346)
Q Consensus 120 GNHE~~~i~~ 129 (346)
||||-.....
T Consensus 81 GNhDk~~~~~ 90 (186)
T COG4186 81 GNHDKCHPMY 90 (186)
T ss_pred CCCCCCcccc
Confidence 9999865443
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.34 E-value=0.0075 Score=52.63 Aligned_cols=119 Identities=18% Similarity=0.241 Sum_probs=79.1
Q ss_pred EEEcCCCCCHHHHHHHHHhCC--CCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCCh
Q 019125 57 KICGDVHGQFSDLLRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (346)
Q Consensus 57 ~ViGDIHG~~~~L~~ll~~~g--~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~ 134 (346)
.|+||+||+++.+..-++... -.+-+-++++||+..-...+ +-+.-.+.=..+.|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999877766532 23457889999999766555 3333333344467888999999998
Q ss_pred HHHHHHhchhhHHhhchhhccCCceEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCCCCCCc
Q 019125 135 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 214 (346)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~ 214 (346)
.-.||++|.=+.. +.+..+. ..+
T Consensus 69 ----------------------------~~DILlTh~wP~g----i~~~~~~----------------~~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPKG----ISKLSKV----------------PFE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCchh----hhhhCCC----------------ccc---------
Confidence 4478998863211 1100000 000
Q ss_pred cCCCCcccccCHHHHHHHHHhCCCceEEeeeccc
Q 019125 215 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVV 248 (346)
Q Consensus 215 ~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v 248 (346)
..+..-|...+.+++++..=.+.+-||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012235788999999999999999999754
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.34 E-value=0.0091 Score=52.96 Aligned_cols=48 Identities=25% Similarity=0.352 Sum_probs=30.9
Q ss_pred CCCceEEEeccccCCCCCcH--HHHHHHHHHHHhc--------CCcEEEeCCCccccc
Q 019125 79 PPEANYLFLGDYVDRGKQSI--ETICLLLAYKVKY--------KENFFLLRGNHECAS 126 (346)
Q Consensus 79 ~~~~~~vfLGDyVDRG~~sl--evl~lL~~lki~~--------p~~v~lLrGNHE~~~ 126 (346)
-..+.++|+||++|.+.... +....+..++..+ ...++.+.||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34578999999999987542 2222222222211 446999999999864
No 84
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.08 E-value=0.076 Score=50.26 Aligned_cols=24 Identities=4% Similarity=-0.057 Sum_probs=21.3
Q ss_pred cCHHHHHHHHHhCCCceEEeeecc
Q 019125 224 FGADKVVEFLQKHDLDLICRAHQV 247 (346)
Q Consensus 224 FG~~~~~~fl~~~~l~~IIRgH~~ 247 (346)
-.++..++.|++.+-.+|.-||+-
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 368899999999999999999975
No 85
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.07 E-value=0.014 Score=54.27 Aligned_cols=66 Identities=29% Similarity=0.300 Sum_probs=42.2
Q ss_pred cEEEEcCCCCCH---------HHHHHHHHhCCCC-CCceEEEeccccCCCCCcH-----HHHHHHHHHHHhcCCcEEEeC
Q 019125 55 PIKICGDVHGQF---------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLR 119 (346)
Q Consensus 55 ~i~ViGDIHG~~---------~~L~~ll~~~g~~-~~~~~vfLGDyVDRG~~sl-----evl~lL~~lki~~p~~v~lLr 119 (346)
+++.++|+||.+ ..+.++++...-. ++.-++..||+++.++.+. .++..+-++ .. . ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~---g~-d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL---GY-D-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc---CC-C-EEee
Confidence 578899999887 5566667665433 3335577899999887653 344333322 22 3 3455
Q ss_pred CCcccc
Q 019125 120 GNHECA 125 (346)
Q Consensus 120 GNHE~~ 125 (346)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 86
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=95.95 E-value=0.016 Score=52.75 Aligned_cols=46 Identities=20% Similarity=0.382 Sum_probs=33.7
Q ss_pred CCceEEEeccccCCCCCc--HHHHHHHHHHHHhcC----CcEEEeCCCcccc
Q 019125 80 PEANYLFLGDYVDRGKQS--IETICLLLAYKVKYK----ENFFLLRGNHECA 125 (346)
Q Consensus 80 ~~~~~vfLGDyVDRG~~s--levl~lL~~lki~~p----~~v~lLrGNHE~~ 125 (346)
..+.++||||++|.|+.+ .|....+..++-.++ ..++.+.||||--
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 457899999999999964 335555555554333 3688999999975
No 87
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.68 E-value=0.035 Score=55.29 Aligned_cols=74 Identities=23% Similarity=0.204 Sum_probs=53.5
Q ss_pred CcEEEEcCCCCC-------------HHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcC---CcEEE
Q 019125 54 APIKICGDVHGQ-------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYK---ENFFL 117 (346)
Q Consensus 54 ~~i~ViGDIHG~-------------~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p---~~v~l 117 (346)
|++.-++|.|=- +.+|..+++.+.-...|-+|+-||++|++.-|.+++.++...-.+.. -.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 577888898833 34455555555545557899999999999999888777655433322 37999
Q ss_pred eCCCccccch
Q 019125 118 LRGNHECASI 127 (346)
Q Consensus 118 LrGNHE~~~i 127 (346)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999999653
No 88
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.01 E-value=0.056 Score=49.14 Aligned_cols=65 Identities=18% Similarity=0.215 Sum_probs=41.0
Q ss_pred CCCCCHHHHHHHHHhCCC-CCCceEEEeccccCCCCCcHHH-HHHHHHHHHhc---------------------CCcEEE
Q 019125 61 DVHGQFSDLLRLFEYGGY-PPEANYLFLGDYVDRGKQSIET-ICLLLAYKVKY---------------------KENFFL 117 (346)
Q Consensus 61 DIHG~~~~L~~ll~~~g~-~~~~~~vfLGDyVDRG~~slev-l~lL~~lki~~---------------------p~~v~l 117 (346)
|++|+=.=|.+.++.+-. -..+.++||||++|.|--+-+- -.....++-.+ ...+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 556666667777765433 2447889999999987543322 23333333322 135789
Q ss_pred eCCCcccc
Q 019125 118 LRGNHECA 125 (346)
Q Consensus 118 LrGNHE~~ 125 (346)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999984
No 89
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.89 E-value=1.5 Score=45.01 Aligned_cols=208 Identities=17% Similarity=0.198 Sum_probs=106.0
Q ss_pred cEEEEcCCCC-CHH----HHHHHHHhCCCC----CCceEE-EeccccCC-CCC-----------cHHHHHHHHHHHHhcC
Q 019125 55 PIKICGDVHG-QFS----DLLRLFEYGGYP----PEANYL-FLGDYVDR-GKQ-----------SIETICLLLAYKVKYK 112 (346)
Q Consensus 55 ~i~ViGDIHG-~~~----~L~~ll~~~g~~----~~~~~v-fLGDyVDR-G~~-----------slevl~lL~~lki~~p 112 (346)
.+.+++|+|= ... .+..+++.++-+ +..+|+ .-||.||. |-+ ..|-...+..+--.=|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4789999995 322 233334433333 233555 56899994 211 2233334444433445
Q ss_pred C--cEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccCCceEEEcC-cEEEecCCCCCCCCCHHHHhcccCC
Q 019125 113 E--NFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARP 189 (346)
Q Consensus 113 ~--~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~-~il~vHgGi~p~~~~le~i~~i~rp 189 (346)
. .|++.+||||..-.....-...+.. ..++...+-.|-.=|...-+++ .++..|| .++++|...-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~----kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~ 376 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELI----KSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPG 376 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhh----cccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCC
Confidence 5 6899999999975543332222221 2233333222333355544544 6888887 477776654333
Q ss_pred CCCCCc--chhhhhhhCCCCCCCCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEeccC
Q 019125 190 VDVPDQ--GLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAP 267 (346)
Q Consensus 190 ~~~~~~--~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~ 267 (346)
.+..+. -+.+-|.|.-=.+...+-.+ .+-|.+|- |-=.---+.++.||+.. .|+....+.+++..+|-+
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~kD~---lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q 447 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPETKDY---LVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQ 447 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCccc-----cccCCcCc---eeeccCCcEEEEccccc-cceeEEeccceEEeeeec
Confidence 222111 12222344332221111100 00011110 00011146789999997 789888888899888888
Q ss_pred CCCCCCCCcEEEEEEcCC
Q 019125 268 NYCGEFDNAGAMMSVDDT 285 (346)
Q Consensus 268 ~Y~~~~~N~ga~l~i~~~ 285 (346)
... -.+-++.|+..
T Consensus 448 ~qT----efqk~vni~p~ 461 (481)
T COG1311 448 EQT----EFQKMVNINPT 461 (481)
T ss_pred chh----ccceEEEecCc
Confidence 654 33445656554
No 90
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=94.88 E-value=0.0015 Score=64.73 Aligned_cols=194 Identities=12% Similarity=-0.107 Sum_probs=126.5
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHh----chhhHHhhchhhccCC
Q 019125 82 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF----NVRVWKTFTDCFNCLP 157 (346)
Q Consensus 82 ~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~----~~~~~~~~~~~f~~LP 157 (346)
-..|+++++.+++.+.++.+-+-+..+..+-.+.-.+++||+.. +++++++.-.. ...+|+..++-++..+
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccce
Confidence 45799999999999999999999999999999999999999543 34444333222 2356788888888888
Q ss_pred ceEEEcCcEEEecCCCCCCCCCHHHHhcccCCC--CCCCc-chhhhhhhCCCCCCCCCCccCCCCcccccCHHH--HHHH
Q 019125 158 VAALVDEKILCMHGGLSPDLKNLDQIRNIARPV--DVPDQ-GLLCDLLWADPDKDIEGWGENDRGVSYTFGADK--VVEF 232 (346)
Q Consensus 158 laaii~~~il~vHgGi~p~~~~le~i~~i~rp~--~~~~~-~~~~dlLWsDP~~~~~~~~~n~rg~~~~FG~~~--~~~f 232 (346)
...+.. ++++.||+..|.......+..+.-.. +...+ +.-..++=+|-.. ...|.. ++....||.|- .-++
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~-k~tw~~--~~~~p~~gyDfwyqpr~ 199 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNE-KGTWEK--PGHSPLFGYDFWYQPRH 199 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccce-eccccc--CCCccccccceeecccc
Confidence 887765 99999999999765444433222111 00000 0111222122111 112322 22333444433 3345
Q ss_pred HHhCCCceEEeeecccccCeEEecCCeEEEEeccCCCCCCCCCcEEEEEEcCCC
Q 019125 233 LQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTL 286 (346)
Q Consensus 233 l~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~~N~ga~l~i~~~~ 286 (346)
+...+.+...+.|.-...+...+.++ ++.++.+-|.-...|-++.+.+..++
T Consensus 200 ~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~g 251 (476)
T KOG0918|consen 200 NVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTG 251 (476)
T ss_pred ceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCC
Confidence 56667777888888765555556665 88999999998889999999998874
No 91
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=94.60 E-value=0.036 Score=51.57 Aligned_cols=73 Identities=21% Similarity=0.245 Sum_probs=45.0
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHH-------------------------HHHHHHHHH
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIE-------------------------TICLLLAYK 108 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~sle-------------------------vl~lL~~lk 108 (346)
.++..++|.||+++.+.++.+.+.-...|-++|+||++-....+-| .+.-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 4689999999999999999887665567889999999865544333 333333333
Q ss_pred HhcCCcEEEeCCCccccc
Q 019125 109 VKYKENFFLLRGNHECAS 126 (346)
Q Consensus 109 i~~p~~v~lLrGNHE~~~ 126 (346)
-..+-.+++++||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 345668999999999853
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=94.40 E-value=0.064 Score=50.85 Aligned_cols=65 Identities=22% Similarity=0.229 Sum_probs=38.0
Q ss_pred cEEEEcCCCCCH----------------HHHHHHHHhCCCCCCceEEE-eccccCCCCCc-----------HHHHHHHHH
Q 019125 55 PIKICGDVHGQF----------------SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQS-----------IETICLLLA 106 (346)
Q Consensus 55 ~i~ViGDIHG~~----------------~~L~~ll~~~g~~~~~~~vf-LGDyVDRG~~s-----------levl~lL~~ 106 (346)
.|+..+|+||++ ..+..+++.......+.+++ .||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 477889999996 33555565544333334443 79999976522 123333333
Q ss_pred HHHhcCCcEEEeCCCccc
Q 019125 107 YKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 107 lki~~p~~v~lLrGNHE~ 124 (346)
+ -.+ ++..||||.
T Consensus 82 ~---g~d--~~~lGNHe~ 94 (277)
T cd07410 82 L---GYD--AGTLGNHEF 94 (277)
T ss_pred c---CCC--EEeecccCc
Confidence 3 333 455699996
No 93
>PLN02533 probable purple acid phosphatase
Probab=94.33 E-value=0.059 Score=54.72 Aligned_cols=71 Identities=15% Similarity=0.121 Sum_probs=40.2
Q ss_pred cCcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcH--HH-HHHHHHHHHhcCCcEEEeCCCccccc
Q 019125 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--ET-ICLLLAYKVKYKENFFLLRGNHECAS 126 (346)
Q Consensus 53 ~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~sl--ev-l~lL~~lki~~p~~v~lLrGNHE~~~ 126 (346)
.-+++++||+|-. ......++.+.....+-++++||+++-+.+.- +. ..++-.+... --++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~--~P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQ--RPWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhc--CceEEeCccccccc
Confidence 3468999999632 21223333333344567889999998654321 11 1122212112 34789999999864
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=93.55 E-value=0.16 Score=47.72 Aligned_cols=70 Identities=21% Similarity=0.256 Sum_probs=40.1
Q ss_pred cEEEEcCCCCC--H--HHHHHHHH-hCCCCCCceEEEecccc-CCCCCcH------HHHHHHHHHHHhcCCcEEEeCCCc
Q 019125 55 PIKICGDVHGQ--F--SDLLRLFE-YGGYPPEANYLFLGDYV-DRGKQSI------ETICLLLAYKVKYKENFFLLRGNH 122 (346)
Q Consensus 55 ~i~ViGDIHG~--~--~~L~~ll~-~~g~~~~~~~vfLGDyV-DRG~~sl------evl~lL~~lki~~p~~v~lLrGNH 122 (346)
+++++||.-.. . .++.+.+. .+.....+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 57899997663 1 33443333 33324457789999997 5553221 222222221 11234699999999
Q ss_pred ccc
Q 019125 123 ECA 125 (346)
Q Consensus 123 E~~ 125 (346)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 95
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=93.41 E-value=7.2 Score=37.05 Aligned_cols=47 Identities=21% Similarity=0.357 Sum_probs=29.8
Q ss_pred ceEEeeecccccCeEEec--CCeEEEEeccCCCCCCCCCcEEEEEEc-CCCceEE
Q 019125 239 DLICRAHQVVEDGYEFFA--KRQLVTVFSAPNYCGEFDNAGAMMSVD-DTLTCSF 290 (346)
Q Consensus 239 ~~IIRgH~~v~~G~~~~~--~~~~iTiFSa~~Y~~~~~N~ga~l~i~-~~~~~~~ 290 (346)
+.++-|||.. -|.+.+. +++-+.+.|.|.|. ..|.++.+| ++++|..
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs----~t~~~vlvdl~tLe~~~ 254 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFS----KTGTAVLVNLRTLECEP 254 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcC----cCCEEEEEECCcCcEEE
Confidence 4577899886 3555443 25677788889874 456666665 4555543
No 96
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=93.36 E-value=0.26 Score=46.13 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=45.0
Q ss_pred cCcEEEEcCCCCCHHHHH----------------HHHH-hCCCCCCceEEEeccccCCCCCc-----HHHHHHHHHHHHh
Q 019125 53 EAPIKICGDVHGQFSDLL----------------RLFE-YGGYPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVK 110 (346)
Q Consensus 53 ~~~i~ViGDIHG~~~~L~----------------~ll~-~~g~~~~~~~vfLGDyVDRG~~s-----levl~lL~~lki~ 110 (346)
..+..|+.|+|=-|...+ +.+. .......+++|++||.-.-.+.+ .|+-.++-.++ .
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~-~ 97 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD-E 97 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-c
Confidence 468999999996554433 2222 11122347899999998654432 34444333332 2
Q ss_pred cCCcEEEeCCCccccchh
Q 019125 111 YKENFFLLRGNHECASIN 128 (346)
Q Consensus 111 ~p~~v~lLrGNHE~~~i~ 128 (346)
. .+.+++||||...-.
T Consensus 98 ~--evi~i~GNHD~~i~~ 113 (235)
T COG1407 98 R--EVIIIRGNHDNGIEE 113 (235)
T ss_pred C--cEEEEeccCCCcccc
Confidence 2 599999999986544
No 97
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=93.22 E-value=0.13 Score=48.23 Aligned_cols=66 Identities=20% Similarity=0.147 Sum_probs=39.2
Q ss_pred cEEEEcCCCCCH----------HHHHHHHHhCCCCCCceEEEeccccCCCCCcH-----HHHHHHHHHHHhcCCcEEEeC
Q 019125 55 PIKICGDVHGQF----------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLR 119 (346)
Q Consensus 55 ~i~ViGDIHG~~----------~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~sl-----evl~lL~~lki~~p~~v~lLr 119 (346)
++.-++|+||++ ..+..+++.....++.-++..||+++..+.+. .++..+ +..-. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l---n~~g~-d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIM---NAVGY-DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHH---HhcCC-cE-Ecc
Confidence 467889999984 44556666544334455666899998766432 222222 22212 33 456
Q ss_pred CCcccc
Q 019125 120 GNHECA 125 (346)
Q Consensus 120 GNHE~~ 125 (346)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 98
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=91.43 E-value=0.25 Score=47.33 Aligned_cols=66 Identities=26% Similarity=0.293 Sum_probs=40.2
Q ss_pred cEEEEcCCCCCHHH--------------HHHHHHhCCCC-CCceEEEeccccCCCCC-c-----HHHHHHHHHHHHhcCC
Q 019125 55 PIKICGDVHGQFSD--------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQ-S-----IETICLLLAYKVKYKE 113 (346)
Q Consensus 55 ~i~ViGDIHG~~~~--------------L~~ll~~~g~~-~~~~~vfLGDyVDRG~~-s-----levl~lL~~lki~~p~ 113 (346)
.++.+.|+||++.. +..+++..... ++.-++..||+++..+. + ..++..+-++. .
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g---~- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG---V- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC---C-
Confidence 47789999998543 55566654432 33456668999987664 2 13444444332 2
Q ss_pred cEEEeCCCcccc
Q 019125 114 NFFLLRGNHECA 125 (346)
Q Consensus 114 ~v~lLrGNHE~~ 125 (346)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 3556999963
No 99
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=91.21 E-value=0.49 Score=38.17 Aligned_cols=43 Identities=19% Similarity=0.346 Sum_probs=31.5
Q ss_pred ChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceec
Q 019125 2 DETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 52 (346)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ll~l 52 (346)
+...++.+++.+...+ .|+...+..|+.++.++|+++|+++++
T Consensus 53 t~efv~~mie~FK~~K--------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 53 TLEFVKAMIEWFKNQK--------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp -HHHHHHHHHHHHCT------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CHHHHHHHHHHHHhCC--------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 4456777777776544 688999999999999999999999985
No 100
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=90.51 E-value=0.56 Score=47.30 Aligned_cols=56 Identities=25% Similarity=0.400 Sum_probs=37.8
Q ss_pred HHHHHHhCCCC-CCceEEEeccccCCCCCc--HHHHHHHHHHHHhcCC----cEEEeCCCccc
Q 019125 69 LLRLFEYGGYP-PEANYLFLGDYVDRGKQS--IETICLLLAYKVKYKE----NFFLLRGNHEC 124 (346)
Q Consensus 69 L~~ll~~~g~~-~~~~~vfLGDyVDRG~~s--levl~lL~~lki~~p~----~v~lLrGNHE~ 124 (346)
|.+.+...-+. ..+..+||||++|-|... -|--....++|-.++. .+..+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 34444443332 346788999999988765 3444555566666665 78999999997
No 101
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=90.41 E-value=0.55 Score=46.47 Aligned_cols=73 Identities=25% Similarity=0.407 Sum_probs=47.2
Q ss_pred CcEEEEcCCCCCHHHHHH---HHHhCCCCCCceEEEeccccC-CCCCcHHHH---------HHH---HHHHHhcCCcEEE
Q 019125 54 APIKICGDVHGQFSDLLR---LFEYGGYPPEANYLFLGDYVD-RGKQSIETI---------CLL---LAYKVKYKENFFL 117 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~---ll~~~g~~~~~~~vfLGDyVD-RG~~slevl---------~lL---~~lki~~p~~v~l 117 (346)
|+|.|=|=-||+++.+-+ ..++.|-.+-|-++++||+=- |....+..+ .-. +.=.++.|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 578999999999999874 445566667788999999852 221111111 111 1112345656678
Q ss_pred eCCCccccc
Q 019125 118 LRGNHECAS 126 (346)
Q Consensus 118 LrGNHE~~~ 126 (346)
+-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999974
No 102
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=90.17 E-value=0.62 Score=44.40 Aligned_cols=73 Identities=21% Similarity=0.213 Sum_probs=43.7
Q ss_pred EEEEcCCCCC--HHHHHHHHHhCCC--CCCceEEEeccccCCCCCcH--H------HHHHHHHHHHhcCC-cEEEeCCCc
Q 019125 56 IKICGDVHGQ--FSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSI--E------TICLLLAYKVKYKE-NFFLLRGNH 122 (346)
Q Consensus 56 i~ViGDIHG~--~~~L~~ll~~~g~--~~~~~~vfLGDyVDRG~~sl--e------vl~lL~~lki~~p~-~v~lLrGNH 122 (346)
.--.|+-.-+ ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|. .|+.+.|||
T Consensus 40 ~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 40 AGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred CCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 3445665422 3445556654433 35678899999998876531 1 12223334444454 799999999
Q ss_pred cccchh
Q 019125 123 ECASIN 128 (346)
Q Consensus 123 E~~~i~ 128 (346)
|....+
T Consensus 120 D~~p~~ 125 (296)
T cd00842 120 DSYPVN 125 (296)
T ss_pred CCCccc
Confidence 986543
No 103
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=90.10 E-value=0.52 Score=44.42 Aligned_cols=65 Identities=18% Similarity=0.185 Sum_probs=36.2
Q ss_pred cEEEEcCCCCCHHH----------------------HHHHHHhCCCC-CCceE-EEeccccCCCCCcH-----HHHHHHH
Q 019125 55 PIKICGDVHGQFSD----------------------LLRLFEYGGYP-PEANY-LFLGDYVDRGKQSI-----ETICLLL 105 (346)
Q Consensus 55 ~i~ViGDIHG~~~~----------------------L~~ll~~~g~~-~~~~~-vfLGDyVDRG~~sl-----evl~lL~ 105 (346)
.+..++|+||++.. +..+++..... ..+.+ +..||+++..+.+. .++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 35678899997533 34455544322 33334 55899998876442 3333333
Q ss_pred HHHHhcCCcEEEeCCCcccc
Q 019125 106 AYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 106 ~lki~~p~~v~lLrGNHE~~ 125 (346)
+ .+-. .+. ||||..
T Consensus 82 ~----~g~d-a~~-GNHefd 95 (264)
T cd07411 82 A----LGVD-AMV-GHWEFT 95 (264)
T ss_pred h----hCCe-EEe-cccccc
Confidence 2 2323 334 999963
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=87.45 E-value=0.69 Score=52.81 Aligned_cols=65 Identities=18% Similarity=0.123 Sum_probs=39.4
Q ss_pred cEEEEcCCCCCH---HHHHHHHHhCCCCCCceEEE-eccccCCCCCcH-----HHHHHHHHHHHhcCCcEEEeCCCccc
Q 019125 55 PIKICGDVHGQF---SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 55 ~i~ViGDIHG~~---~~L~~ll~~~g~~~~~~~vf-LGDyVDRG~~sl-----evl~lL~~lki~~p~~v~lLrGNHE~ 124 (346)
.++.++|+||.+ ..+..+++.......+.+++ .||+++..+.+- .++.++-++ .--++..||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-----g~d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-----GYDASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-----CCCEEEeccccc
Confidence 578899999985 44444555443222334444 799999876542 334443332 223568999997
No 105
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=86.90 E-value=1.1 Score=42.83 Aligned_cols=66 Identities=18% Similarity=0.131 Sum_probs=36.8
Q ss_pred cEEEEcCCCCCH---------------------HHHHHHHHhCCCCCCc-eEEEeccccCCCCCc-----HHHHHHHHHH
Q 019125 55 PIKICGDVHGQF---------------------SDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQS-----IETICLLLAY 107 (346)
Q Consensus 55 ~i~ViGDIHG~~---------------------~~L~~ll~~~g~~~~~-~~vfLGDyVDRG~~s-----levl~lL~~l 107 (346)
.++-++|+||++ ..+..+++.......+ -++..||+++..+.+ ..++..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~l--- 78 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFM--- 78 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHH---
Confidence 467789999875 3444555544322223 344479999876643 2223332
Q ss_pred HHhcCCcEEEeCCCcccc
Q 019125 108 KVKYKENFFLLRGNHECA 125 (346)
Q Consensus 108 ki~~p~~v~lLrGNHE~~ 125 (346)
+..-.+ + +..||||.-
T Consensus 79 n~~g~D-~-~~lGNHefd 94 (281)
T cd07409 79 NLLGYD-A-MTLGNHEFD 94 (281)
T ss_pred HhcCCC-E-EEecccccc
Confidence 322233 3 445999973
No 106
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.43 E-value=11 Score=33.19 Aligned_cols=116 Identities=24% Similarity=0.362 Sum_probs=76.3
Q ss_pred EEEEcCCCCC--HHHHHHHHHhCCCCCC-ceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcC
Q 019125 56 IKICGDVHGQ--FSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (346)
Q Consensus 56 i~ViGDIHG~--~~~L~~ll~~~g~~~~-~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~g 132 (346)
+.++||+|=- -.+|-.-|++.-.|.. ..++++|++. |.|++.+|-.+ ...++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l----~~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTL----SSDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhh----CCCcEEEecccCcc-------
Confidence 6789999843 3445555555556655 5688999964 67888887655 45899999976653
Q ss_pred ChHHHHHHhchhhHHhhchhhccCCceEEEc---CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhCCCCCC
Q 019125 133 FYDECKRRFNVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKD 209 (346)
Q Consensus 133 f~~e~~~~~~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGi~p~~~~le~i~~i~rp~~~~~~~~~~dlLWsDP~~~ 209 (346)
..-|...++. =++-|+||-.- +=|.||
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~--- 96 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDP--- 96 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCH---
Confidence 1123322222 27899998532 124555
Q ss_pred CCCCccCCCCcccccCHHHHHHHHHhCCCceEEeeecccccCeEE
Q 019125 210 IEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEF 254 (346)
Q Consensus 210 ~~~~~~n~rg~~~~FG~~~~~~fl~~~~l~~IIRgH~~v~~G~~~ 254 (346)
+++.-.-+..+++.++-||+..-+.|+.
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 3455566778899999999987777663
No 107
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=85.63 E-value=1.6 Score=39.42 Aligned_cols=74 Identities=20% Similarity=0.246 Sum_probs=43.5
Q ss_pred CCCceEEEeccccC--CCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCChHHHHHHhchhhHHhhchhhccC
Q 019125 79 PPEANYLFLGDYVD--RGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCL 156 (346)
Q Consensus 79 ~~~~~~vfLGDyVD--RG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~L 156 (346)
.++|.++.-||+-- |=++..+-+.++-+| |..=+++|||||.+.-. ...+...+... ....++.|+.+
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s-----~skl~n~lp~~-l~~~n~~f~l~ 111 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSS-----ISKLNNALPPI-LFYLNNGFELL 111 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccch-----HHHHHhhcCch-HhhhccceeEe
Confidence 34566667799853 344455556666555 88899999999997542 12222333222 34456666666
Q ss_pred CceEEEc
Q 019125 157 PVAALVD 163 (346)
Q Consensus 157 Plaaii~ 163 (346)
-.| +++
T Consensus 112 n~a-I~G 117 (230)
T COG1768 112 NYA-IVG 117 (230)
T ss_pred eEE-EEE
Confidence 533 444
No 108
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=85.40 E-value=1.8 Score=41.26 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=47.3
Q ss_pred CcEEEEcCCCCC--HHHHHHHHHhCCCCC-CceEEEeccccCCC-CCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 019125 54 APIKICGDVHGQ--FSDLLRLFEYGGYPP-EANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 54 ~~i~ViGDIHG~--~~~L~~ll~~~g~~~-~~~~vfLGDyVDRG-~~slevl~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
|++.++|||=|. ...+...|..+.... .+-.|..||....| --+-++...|..+ .-.++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 579999999999 556666776654433 35566689999766 4567777777644 4456666 999985
No 109
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=83.77 E-value=1.9 Score=38.84 Aligned_cols=72 Identities=14% Similarity=0.119 Sum_probs=40.8
Q ss_pred EEEEcCCCCC-----HHHHHHHHHhCC-CCCCceEEEeccccCCCCCcH----------HHHHHHHHHHHhc-----CCc
Q 019125 56 IKICGDVHGQ-----FSDLLRLFEYGG-YPPEANYLFLGDYVDRGKQSI----------ETICLLLAYKVKY-----KEN 114 (346)
Q Consensus 56 i~ViGDIHG~-----~~~L~~ll~~~g-~~~~~~~vfLGDyVDRG~~sl----------evl~lL~~lki~~-----p~~ 114 (346)
|++++|+|=. ++.|.++|+.+. ....+.+|++|+++|.-.... .....+..+...+ --+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677887755 667778888777 555678999999999632221 1111111222112 248
Q ss_pred EEEeCCCccccch
Q 019125 115 FFLLRGNHECASI 127 (346)
Q Consensus 115 v~lLrGNHE~~~i 127 (346)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998654
No 110
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=83.54 E-value=2.2 Score=40.11 Aligned_cols=56 Identities=23% Similarity=0.135 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHhCCCCCCc-eEEEeccccCCCCCc-----HHHHHHHHHHHHhcCCcEEEeCCCccc
Q 019125 64 GQFSDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 64 G~~~~L~~ll~~~g~~~~~-~~vfLGDyVDRG~~s-----levl~lL~~lki~~p~~v~lLrGNHE~ 124 (346)
|-+..+..+++.......+ -++..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4467777777765443334 556689999887532 34444444332 23567899996
No 111
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.35 E-value=4.2 Score=41.57 Aligned_cols=69 Identities=23% Similarity=0.375 Sum_probs=52.7
Q ss_pred cCcEEEEcCCCCCHHHHHHHHHhCCCC--CCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCc
Q 019125 53 EAPIKICGDVHGQFSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNH 122 (346)
Q Consensus 53 ~~~i~ViGDIHG~~~~L~~ll~~~g~~--~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNH 122 (346)
+.+|.|+||.-|+++.|.+-.+..... |-+-++++|++++--.++.|++.+...- ...|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 478999999999999998777655432 4578999999999877888887665432 34677778887765
No 112
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=77.30 E-value=6 Score=37.48 Aligned_cols=66 Identities=17% Similarity=0.125 Sum_probs=42.8
Q ss_pred cEEEEcCCCCCHH--HHHHHHHhCCCC-CCceEEEeccccCCC-CCcHHHHHHHHHHHHhcCCcEEEeCCCcccc
Q 019125 55 PIKICGDVHGQFS--DLLRLFEYGGYP-PEANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 55 ~i~ViGDIHG~~~--~L~~ll~~~g~~-~~~~~vfLGDyVDRG-~~slevl~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
++.++|||=|... .+.+.+...... +.+-.+-.||..-.| .-+-++...|..+. -.+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 5789999999954 345555544322 234455589998776 36777777776553 344444 999864
No 113
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=77.08 E-value=2.9 Score=43.35 Aligned_cols=68 Identities=28% Similarity=0.256 Sum_probs=40.8
Q ss_pred cCcEEEEcCCCCCHH------------HHHH---HHHhCCCCCCce-EEEeccccCCCCCc------HHHHHHHHHHHHh
Q 019125 53 EAPIKICGDVHGQFS------------DLLR---LFEYGGYPPEAN-YLFLGDYVDRGKQS------IETICLLLAYKVK 110 (346)
Q Consensus 53 ~~~i~ViGDIHG~~~------------~L~~---ll~~~g~~~~~~-~vfLGDyVDRG~~s------levl~lL~~lki~ 110 (346)
+..|+-..|+||++. -+.+ +++...-..... +|=.||+++..+-+ ...+.+|-.++.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y- 104 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY- 104 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC-
Confidence 446788899999998 3333 333222222233 34479999984333 345555555542
Q ss_pred cCCcEEEeCCCcccc
Q 019125 111 YKENFFLLRGNHECA 125 (346)
Q Consensus 111 ~p~~v~lLrGNHE~~ 125 (346)
=.+..||||.-
T Consensus 105 ----Da~tiGNHEFd 115 (517)
T COG0737 105 ----DAMTLGNHEFD 115 (517)
T ss_pred ----cEEeecccccc
Confidence 25788999984
No 114
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=76.39 E-value=3.5 Score=39.58 Aligned_cols=66 Identities=20% Similarity=0.090 Sum_probs=36.6
Q ss_pred cEEEEcCCCCCHHH-------------HHHHHHhC----CC-CCCceEEEeccccCCCCCcH-------HHHHHHHHHHH
Q 019125 55 PIKICGDVHGQFSD-------------LLRLFEYG----GY-PPEANYLFLGDYVDRGKQSI-------ETICLLLAYKV 109 (346)
Q Consensus 55 ~i~ViGDIHG~~~~-------------L~~ll~~~----g~-~~~~~~vfLGDyVDRG~~sl-------evl~lL~~lki 109 (346)
.|+-..|+||++.. +.++.+.. .. .++.-++..||.++.-+.+- -++.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 57788999998641 22322221 11 22233455899998654431 123333322
Q ss_pred hcCCcEEEeCCCcccc
Q 019125 110 KYKENFFLLRGNHECA 125 (346)
Q Consensus 110 ~~p~~v~lLrGNHE~~ 125 (346)
.-=.+..||||.-
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 2336789999994
No 115
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=74.28 E-value=3.2 Score=39.68 Aligned_cols=66 Identities=21% Similarity=0.059 Sum_probs=34.4
Q ss_pred cEEEEcCCCCCHHH----------HHHHHHhCCC-----CCCceEEEeccccCCCCCc-----HHHHHHHHHHHHhcCCc
Q 019125 55 PIKICGDVHGQFSD----------LLRLFEYGGY-----PPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKEN 114 (346)
Q Consensus 55 ~i~ViGDIHG~~~~----------L~~ll~~~g~-----~~~~~~vfLGDyVDRG~~s-----levl~lL~~lki~~p~~ 114 (346)
.|+-..|+||++.. +..+++.... .++.-++-.||.+...+.+ .-++.++-++. - .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g---~-D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---Y-D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC---C-c
Confidence 36778999998533 3344443321 2333344579998543322 22233333322 2 2
Q ss_pred EEEeCCCcccc
Q 019125 115 FFLLRGNHECA 125 (346)
Q Consensus 115 v~lLrGNHE~~ 125 (346)
+ +..||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 344999964
No 116
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=72.62 E-value=5.8 Score=38.61 Aligned_cols=64 Identities=20% Similarity=0.071 Sum_probs=37.6
Q ss_pred EEEEcCCCCCHH------HHHHHHHhCCC-----CCCceEEEeccccCCCCC-------------cHHHHHHHHHHHHhc
Q 019125 56 IKICGDVHGQFS------DLLRLFEYGGY-----PPEANYLFLGDYVDRGKQ-------------SIETICLLLAYKVKY 111 (346)
Q Consensus 56 i~ViGDIHG~~~------~L~~ll~~~g~-----~~~~~~vfLGDyVDRG~~-------------slevl~lL~~lki~~ 111 (346)
|+-..|+||++. .+..+++.... .++.-++..||.+..++. ..-++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 566899999953 33333443221 233445668999976543 233444444443
Q ss_pred CCcEEEeCCCccc
Q 019125 112 KENFFLLRGNHEC 124 (346)
Q Consensus 112 p~~v~lLrGNHE~ 124 (346)
-=.+..||||.
T Consensus 80 --~Da~tlGNHEF 90 (313)
T cd08162 80 --VQAIALGNHEF 90 (313)
T ss_pred --CcEEecccccc
Confidence 23578999996
No 117
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=70.96 E-value=7.3 Score=38.56 Aligned_cols=72 Identities=21% Similarity=0.194 Sum_probs=43.0
Q ss_pred cEEEEcCCCCCHH-----------------HHH--HHHH-hCCCCCCceEEEeccccCCCCCc---HHHHHHHHHHHHhc
Q 019125 55 PIKICGDVHGQFS-----------------DLL--RLFE-YGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVKY 111 (346)
Q Consensus 55 ~i~ViGDIHG~~~-----------------~L~--~ll~-~~g~~~~~~~vfLGDyVDRG~~s---levl~lL~~lki~~ 111 (346)
+|+.+.|+|=.+. |+. .+++ .+.....|-+||+||.|+. ... ...+.-..+=.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 5788999996555 221 1111 1223445789999999986 322 33333333333344
Q ss_pred CCcEEEeCCCccccch
Q 019125 112 KENFFLLRGNHECASI 127 (346)
Q Consensus 112 p~~v~lLrGNHE~~~i 127 (346)
.--...+.||||+...
T Consensus 134 ~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDESD 149 (379)
T ss_pred CCCeEEEecccccccc
Confidence 4467889999998643
No 118
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=70.94 E-value=5.6 Score=42.72 Aligned_cols=68 Identities=16% Similarity=0.097 Sum_probs=41.4
Q ss_pred ccCcEEEEcCCCCCHHH----------------HHHHHHhCCCC-CCceEEEeccccCCCCCcH-------------HHH
Q 019125 52 LEAPIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-------------ETI 101 (346)
Q Consensus 52 l~~~i~ViGDIHG~~~~----------------L~~ll~~~g~~-~~~~~vfLGDyVDRG~~sl-------------evl 101 (346)
...+|.-..|+||++.. +..+++..... ++.-+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45678889999999643 33344433222 3344566899998766431 244
Q ss_pred HHHHHHHHhcCCcEEEeCCCccc
Q 019125 102 CLLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 102 ~lL~~lki~~p~~v~lLrGNHE~ 124 (346)
..+-.+. -=....||||.
T Consensus 104 ~amN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHHHhcC-----CcEEeccchhh
Confidence 4444443 33678999996
No 119
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=70.31 E-value=5.8 Score=42.42 Aligned_cols=66 Identities=18% Similarity=0.078 Sum_probs=38.6
Q ss_pred CcEEEEcCCCCCHHH----------------HHHHHHhCCCC-CCceEEEeccccCCCCCcH-------------HHHHH
Q 019125 54 APIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-------------ETICL 103 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~----------------L~~ll~~~g~~-~~~~~vfLGDyVDRG~~sl-------------evl~l 103 (346)
-+|.-..|+||++.. +..+++..... ++.-++-.||.+...+.+- -++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 357778999999643 33344443222 2344556899998665431 23444
Q ss_pred HHHHHHhcCCcEEEeCCCccc
Q 019125 104 LLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 104 L~~lki~~p~~v~lLrGNHE~ 124 (346)
+-.+. -=....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 43332 23578899996
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=68.53 E-value=6.2 Score=45.22 Aligned_cols=66 Identities=24% Similarity=0.208 Sum_probs=37.9
Q ss_pred CcEEEEcCCCCCHHH----------------HHHHHHhCCCCCCceEEE-eccccCCCCCc--------------HHHHH
Q 019125 54 APIKICGDVHGQFSD----------------LLRLFEYGGYPPEANYLF-LGDYVDRGKQS--------------IETIC 102 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~----------------L~~ll~~~g~~~~~~~vf-LGDyVDRG~~s--------------levl~ 102 (346)
-.|.-.+|+||++.. +..+++.........+++ .||.+...+.+ .-++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 458889999998632 334444433222234444 89999876521 12333
Q ss_pred HHHHHHHhcCCcEEEeCCCccc
Q 019125 103 LLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 103 lL~~lki~~p~~v~lLrGNHE~ 124 (346)
.+-++ .-=....||||.
T Consensus 122 ~mN~l-----gyDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNAL-----GYDAGTLGNHEF 138 (1163)
T ss_pred HHhhc-----CccEEeeccccc
Confidence 33322 233567999997
No 121
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=66.64 E-value=4.3 Score=41.62 Aligned_cols=57 Identities=25% Similarity=0.360 Sum_probs=40.0
Q ss_pred CHHHHHHHHHhCCCc----eEEeeeccccc--CeE-EecCCeEEEE---eccCCCCCCCCCcEEEEEE
Q 019125 225 GADKVVEFLQKHDLD----LICRAHQVVED--GYE-FFAKRQLVTV---FSAPNYCGEFDNAGAMMSV 282 (346)
Q Consensus 225 G~~~~~~fl~~~~l~----~IIRgH~~v~~--G~~-~~~~~~~iTi---FSa~~Y~~~~~N~ga~l~i 282 (346)
.++..++.|+..|++ .||-||+||.+ |=. .-++|+++-| ||- .|....+=+|-.+..
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFsk-AYqs~TgiAGYTllY 580 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSK-AYQSTTGIAGYTLLY 580 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhh-hhhcccccceeEeee
Confidence 345678899999988 89999999975 322 3478999988 443 365555556655544
No 122
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=65.87 E-value=47 Score=30.30 Aligned_cols=87 Identities=17% Similarity=0.277 Sum_probs=64.7
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccchhhhcCCh----------------HHHHHHhchhh
Q 019125 82 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY----------------DECKRRFNVRV 145 (346)
Q Consensus 82 ~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i~~~~gf~----------------~e~~~~~~~~~ 145 (346)
..+||||- |-+.-|++.++-+|+.+|..+-+. -|+-|.+..++...|. .|..+.|-...
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 46899985 889999999999999999887665 8999998887654442 23334444566
Q ss_pred HHhhchhhccCCceEEEcCcEEEecC-CC
Q 019125 146 WKTFTDCFNCLPVAALVDEKILCMHG-GL 173 (346)
Q Consensus 146 ~~~~~~~f~~LPlaaii~~~il~vHg-Gi 173 (346)
|..+.....++++.-.+--+++.+-| |-
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NGPGT 143 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNGPGT 143 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECCCCc
Confidence 77777777788777776667777776 53
No 123
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=63.50 E-value=10 Score=39.71 Aligned_cols=68 Identities=21% Similarity=0.076 Sum_probs=35.8
Q ss_pred cCcEEEEcCCCCCHH----------HHHHHHHhCC-----CCCCceEEEeccccCCCCCc-----HHHHHHHHHHHHhcC
Q 019125 53 EAPIKICGDVHGQFS----------DLLRLFEYGG-----YPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYK 112 (346)
Q Consensus 53 ~~~i~ViGDIHG~~~----------~L~~ll~~~g-----~~~~~~~vfLGDyVDRG~~s-----levl~lL~~lki~~p 112 (346)
+-.|+-+.|+||++. .+..+++... ..++.-++.-||.+...+.+ .-++.++-++ .
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~----g 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI----G 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC----C
Confidence 345788899999874 1223333322 12334455579998644322 1223333222 2
Q ss_pred CcEEEeCCCcccc
Q 019125 113 ENFFLLRGNHECA 125 (346)
Q Consensus 113 ~~v~lLrGNHE~~ 125 (346)
-.+ +..||||.-
T Consensus 110 ~Da-~tlGNHEFD 121 (551)
T PRK09558 110 YDA-MAVGNHEFD 121 (551)
T ss_pred CCE-EcccccccC
Confidence 233 445999963
No 124
>PF14164 YqzH: YqzH-like protein
Probab=62.52 E-value=29 Score=25.99 Aligned_cols=47 Identities=23% Similarity=0.427 Sum_probs=37.9
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 019125 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPN 48 (346)
Q Consensus 1 ~~~~~~~~~i~~l~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~ 48 (346)
|++..|+++|.+-++-- +......+|++.|...||......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QY-g~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQY-GYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHh-CCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 78888888888888633 123456689999999999999999999985
No 125
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=61.58 E-value=14 Score=38.77 Aligned_cols=65 Identities=23% Similarity=0.101 Sum_probs=36.5
Q ss_pred EEEEcCCCCCHHH---------------------HHHHHHhCCC-CCCceEEEeccccCCCCCc-----HHHHHHHHHHH
Q 019125 56 IKICGDVHGQFSD---------------------LLRLFEYGGY-PPEANYLFLGDYVDRGKQS-----IETICLLLAYK 108 (346)
Q Consensus 56 i~ViGDIHG~~~~---------------------L~~ll~~~g~-~~~~~~vfLGDyVDRG~~s-----levl~lL~~lk 108 (346)
|.-+.|+||++.. +..+++.... .++.-++..||.+...+.+ ...+.++-++
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~- 81 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA- 81 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc-
Confidence 5567888887543 3333433321 2334456689999765443 2233333333
Q ss_pred HhcCCcEEEeCCCcccc
Q 019125 109 VKYKENFFLLRGNHECA 125 (346)
Q Consensus 109 i~~p~~v~lLrGNHE~~ 125 (346)
.--.+..||||.-
T Consensus 82 ----g~Da~~lGNHEFd 94 (550)
T TIGR01530 82 ----GFDFFTLGNHEFD 94 (550)
T ss_pred ----CCCEEEecccccc
Confidence 2346789999963
No 126
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=59.62 E-value=12 Score=41.33 Aligned_cols=66 Identities=21% Similarity=0.114 Sum_probs=38.6
Q ss_pred CcEEEEcCCCCCHHH----------------HHHHHHhCCCC-CCceEEEeccccCCCCCcH--------------HHHH
Q 019125 54 APIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQSI--------------ETIC 102 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~----------------L~~ll~~~g~~-~~~~~vfLGDyVDRG~~sl--------------evl~ 102 (346)
-+|+-..|+||++.. +..+++..... ++.-+|..||.+...+.+- -++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 457778999999643 22233333211 2344566899998655421 2444
Q ss_pred HHHHHHHhcCCcEEEeCCCccc
Q 019125 103 LLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 103 lL~~lki~~p~~v~lLrGNHE~ 124 (346)
+|-.|. -=....||||.
T Consensus 196 amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHhccC-----CCEEEechhhc
Confidence 444442 23678999996
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=59.09 E-value=18 Score=36.51 Aligned_cols=72 Identities=10% Similarity=0.078 Sum_probs=40.3
Q ss_pred CcEEEEcCCC-CCHHHH--HHHHHhCC-CCCCceEEEeccccCCCCCcHHH------HHHHHHHHH-hcCCcEEEeCCCc
Q 019125 54 APIKICGDVH-GQFSDL--LRLFEYGG-YPPEANYLFLGDYVDRGKQSIET------ICLLLAYKV-KYKENFFLLRGNH 122 (346)
Q Consensus 54 ~~i~ViGDIH-G~~~~L--~~ll~~~g-~~~~~~~vfLGDyVDRG~~slev------l~lL~~lki-~~p~~v~lLrGNH 122 (346)
-+.+++||-= |.+... .+.+.... ..+-+-++-+||-++.|..|+.- ..-++.-+. .-.-..+++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 3689999953 332221 12233222 23345677799999888776432 333332111 0123689999999
Q ss_pred ccc
Q 019125 123 ECA 125 (346)
Q Consensus 123 E~~ 125 (346)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 128
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=57.18 E-value=51 Score=31.95 Aligned_cols=73 Identities=19% Similarity=0.291 Sum_probs=48.7
Q ss_pred CcEEEEcCCCCC----HHHHHHHHHhC-CCCC----CceEEEeccccCCC----CCc----HHHHHHHHHH-HHhcC---
Q 019125 54 APIKICGDVHGQ----FSDLLRLFEYG-GYPP----EANYLFLGDYVDRG----KQS----IETICLLLAY-KVKYK--- 112 (346)
Q Consensus 54 ~~i~ViGDIHG~----~~~L~~ll~~~-g~~~----~~~~vfLGDyVDRG----~~s----levl~lL~~l-ki~~p--- 112 (346)
..++|+||+|=+ ++.|.++|+.+ ...+ ...+||+|++.-+. ..+ .|-..-|..+ ..+||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 468999999955 77888888876 2212 34689999999763 222 2333344432 33455
Q ss_pred --CcEEEeCCCccccc
Q 019125 113 --ENFFLLRGNHECAS 126 (346)
Q Consensus 113 --~~v~lLrGNHE~~~ 126 (346)
.+++++.|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 58999999999753
No 129
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=51.74 E-value=20 Score=34.51 Aligned_cols=63 Identities=24% Similarity=0.280 Sum_probs=41.0
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHH---HHHHHHhcCCcEEEeCCCccccc
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICL---LLAYKVKYKENFFLLRGNHECAS 126 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~l---L~~lki~~p~~v~lLrGNHE~~~ 126 (346)
.+.+.++|.|+...+.. ..|+.|-++-+||+-.-|. +-||.-+ +-+|.-+ .=+.++||||.-.
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~---yKIVIaGNHELtF 127 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHE---YKIVIAGNHELTF 127 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhccCcce---eeEEEeeccceee
Confidence 35899999998766543 3566777888999977554 3444332 2222211 3467999999853
No 130
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=48.29 E-value=17 Score=38.68 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=33.8
Q ss_pred eEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccch
Q 019125 83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 127 (346)
Q Consensus 83 ~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i 127 (346)
++=.+||+.||||.+-.++..|+.. .+|=+--||||-..+
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWM 226 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWM 226 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHH
Confidence 5677999999999999999999844 367788999998554
No 131
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=47.07 E-value=65 Score=33.98 Aligned_cols=51 Identities=22% Similarity=0.191 Sum_probs=39.0
Q ss_pred CcEEEEcCCCC------------CHHHHHHHHHhCCCCCCceEEEeccccCCCCCcHHHHHHH
Q 019125 54 APIKICGDVHG------------QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLL 104 (346)
Q Consensus 54 ~~i~ViGDIHG------------~~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~slevl~lL 104 (346)
.+|.|-.|+|= .|..|..+|+.+.-...|-++.=||++.-..-|.+++--.
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~ 76 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRC 76 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHH
Confidence 47888999983 3677888988877666677777899999888787765443
No 132
>KOG1458 consensus Fructose-1,6-bisphosphatase [Carbohydrate transport and metabolism]
Probab=45.07 E-value=22 Score=34.54 Aligned_cols=97 Identities=11% Similarity=0.120 Sum_probs=60.0
Q ss_pred ceEEeeecccccCeEEecCCe--EEEEeccCCCCCCCCCcEEEEEEcCCCceEE-EEeecCCccCCccCCC------CCC
Q 019125 239 DLICRAHQVVEDGYEFFAKRQ--LVTVFSAPNYCGEFDNAGAMMSVDDTLTCSF-QILKASEKKGKVGFGN------NML 309 (346)
Q Consensus 239 ~~IIRgH~~v~~G~~~~~~~~--~iTiFSa~~Y~~~~~N~ga~l~i~~~~~~~~-~~~~p~~~~~~~~~~~------~~~ 309 (346)
+...+|.+.|..||..+.... |+|+-+..|=---..+-|-.+...+++++-- ..|.+.+......|++ ...
T Consensus 162 d~lq~G~~~VAAgY~lYgsat~~vLt~g~Gv~~FtLD~~~GEFiLt~~n~kIp~~g~IYS~Neg~~~~wd~~~~~Yi~~~ 241 (343)
T KOG1458|consen 162 DVLQPGKELVAAGYALYGSATMLVLTLGSGVHGFTLDPSIGEFILTHPNIKIPEKGKIYSINEGYAADWDEGLTEYIDKK 241 (343)
T ss_pred hhhccchhhhhhhheeeccceEEEEEecCCccceeecCcccceEEecCccccCCCCceeeccchhhhccchHHHHHHHhh
Confidence 346688899999998875543 4555444332222235677777777776643 2566666555666876 234
Q ss_pred CCCCCCCCCCCCeehhhHHHHHHHHh
Q 019125 310 RPGTPPHKVTKPLVVIQLISLLVRTV 335 (346)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (346)
|.+++..+..+-=-|-.+.-|+|||.
T Consensus 242 k~p~~~~~pysaRYvGSMVaDvHRTl 267 (343)
T KOG1458|consen 242 KYPKKGKKPYSARYVGSMVADVHRTL 267 (343)
T ss_pred hccCCCCCCcceeeeccchhhhhhhh
Confidence 44444444344445778889999996
No 133
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=43.62 E-value=31 Score=38.04 Aligned_cols=67 Identities=18% Similarity=0.100 Sum_probs=38.5
Q ss_pred cCcEEEEcCCCCCHHH----------------HHHHHHhCCCC-CCceEEEeccccCCCCCc------------------
Q 019125 53 EAPIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQS------------------ 97 (346)
Q Consensus 53 ~~~i~ViGDIHG~~~~----------------L~~ll~~~g~~-~~~~~vfLGDyVDRG~~s------------------ 97 (346)
.-+|.-..|+||++.. +..++++.... ++.-+|-.||.+-..+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4568889999999632 23334333211 234456689998554332
Q ss_pred -HHHHHHHHHHHHhcCCcEEEeCCCccc
Q 019125 98 -IETICLLLAYKVKYKENFFLLRGNHEC 124 (346)
Q Consensus 98 -levl~lL~~lki~~p~~v~lLrGNHE~ 124 (346)
.-++.++-++. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 22444444332 23578999995
No 134
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=41.11 E-value=28 Score=33.63 Aligned_cols=68 Identities=24% Similarity=0.349 Sum_probs=42.3
Q ss_pred CcEEEEcC--CCCCHHHHHHHHHhCCCC---CCceEEEecccc-CCCCCc---------HHHHHHHHHHHHhcCCcEEEe
Q 019125 54 APIKICGD--VHGQFSDLLRLFEYGGYP---PEANYLFLGDYV-DRGKQS---------IETICLLLAYKVKYKENFFLL 118 (346)
Q Consensus 54 ~~i~ViGD--IHG~~~~L~~ll~~~g~~---~~~~~vfLGDyV-DRG~~s---------levl~lL~~lki~~p~~v~lL 118 (346)
-++.|||| .+|.|..-+-.++...+. +-+-++-+||-+ |-|..+ .|-+.---+|+ ...+.+
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ----kpWy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ----KPWYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc----cchhhh
Confidence 36899999 789888776666543322 224566689966 556544 23222211221 257889
Q ss_pred CCCcccc
Q 019125 119 RGNHECA 125 (346)
Q Consensus 119 rGNHE~~ 125 (346)
.||||.+
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
Confidence 9999986
No 135
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=36.97 E-value=1.6e+02 Score=25.80 Aligned_cols=58 Identities=17% Similarity=0.261 Sum_probs=41.4
Q ss_pred EEEcCCCCCHHHHHHHHH-hCCC------------CCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEE
Q 019125 57 KICGDVHGQFSDLLRLFE-YGGY------------PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFL 117 (346)
Q Consensus 57 ~ViGDIHG~~~~L~~ll~-~~g~------------~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~l 117 (346)
++.+-.+||-..+.+.+. .++- ..+-.+||+|=.+|+|.-+-++..+|-.|+ +.+|++
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~l 72 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVAL 72 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEE
Confidence 566667888877765443 3332 123579999999999999999999987764 455544
No 136
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=35.07 E-value=1.2e+02 Score=23.20 Aligned_cols=69 Identities=14% Similarity=0.096 Sum_probs=46.3
Q ss_pred CcEEEEcCCCCCHHHHHHHHHhCC--CCCCceEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCc
Q 019125 54 APIKICGDVHGQFSDLLRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNH 122 (346)
Q Consensus 54 ~~i~ViGDIHG~~~~L~~ll~~~g--~~~~~~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNH 122 (346)
..+.|+=|---|.+.+..+++.+. ++....++.+|+.-|+|..+.+....+-.+...+.+.+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 356777787777888888877653 234566788999999888887766666666666666766666554
No 137
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=25.93 E-value=1e+02 Score=28.98 Aligned_cols=39 Identities=21% Similarity=0.442 Sum_probs=31.6
Q ss_pred CHHHHHHHHHhCCCceEEeeecccccCeEEecCCeEEEEecc
Q 019125 225 GADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSA 266 (346)
Q Consensus 225 G~~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~iTiFSa 266 (346)
....+.+||+.+|.. --+|++.+||.|+.++-+|+||--
T Consensus 139 ~~~~~~~fl~~lGy~---~~~Eyv~~G~~F~~g~i~I~l~ri 177 (250)
T PF09637_consen 139 TSGSLLSFLNELGYR---FDYEYVVEGYRFFKGDIVIELFRI 177 (250)
T ss_dssp SSSSHHHHHHHTTEE---EEEEEEEEEEEEEECCEEEEEEEE
T ss_pred CCCCHHHHHHHcCCc---eEEEEEEEEEEEEECCEEEEEEEE
Confidence 456688999999955 468999999999998877777653
No 138
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=24.80 E-value=1.5e+02 Score=30.61 Aligned_cols=34 Identities=9% Similarity=0.107 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCCceEEeeecccccCeEEecCCeE
Q 019125 227 DKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQL 260 (346)
Q Consensus 227 ~~~~~fl~~~~l~~IIRgH~~v~~G~~~~~~~~~ 260 (346)
..++..+-++++++++-||.-.-+....-.|.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3699999999999999999876555544455444
No 139
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=24.26 E-value=23 Score=30.32 Aligned_cols=83 Identities=28% Similarity=0.437 Sum_probs=45.6
Q ss_pred CCCCCHHHHHHHHHhCCCCCCceE--EEeccccCCCCCcHHHHHHHHHHHHhcCCcEE--EeCCCccccchhhhcCChHH
Q 019125 61 DVHGQFSDLLRLFEYGGYPPEANY--LFLGDYVDRGKQSIETICLLLAYKVKYKENFF--LLRGNHECASINRIYGFYDE 136 (346)
Q Consensus 61 DIHG~~~~L~~ll~~~g~~~~~~~--vfLGDyVDRG~~slevl~lL~~lki~~p~~v~--lLrGNHE~~~i~~~~gf~~e 136 (346)
|+.|++..|.+.|+.+++|..-.+ +-.|| +--.+-++-..-+.|+..|. ++.=++| ....
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l~~~g~e---------L~~k 64 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLLVDRGYE---------LYGK 64 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHHHHcCch---------hhcC
Confidence 899999999999999999944221 23343 22222222222233443221 1111222 1222
Q ss_pred HHHHhchhhHHhhchhhccCCce
Q 019125 137 CKRRFNVRVWKTFTDCFNCLPVA 159 (346)
Q Consensus 137 ~~~~~~~~~~~~~~~~f~~LPla 159 (346)
-..++-+.+|+.+.+.|.+-|.-
T Consensus 65 ~D~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 65 NDLRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCC
Confidence 22345567788888888887765
No 140
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.23 E-value=45 Score=29.32 Aligned_cols=46 Identities=22% Similarity=0.341 Sum_probs=30.9
Q ss_pred cccCHHHHHHHHHhCC---------CceEEeeecccccCeEEecCCeEEEEeccCCCCCCC
Q 019125 222 YTFGADKVVEFLQKHD---------LDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEF 273 (346)
Q Consensus 222 ~~FG~~~~~~fl~~~~---------l~~IIRgH~~v~~G~~~~~~~~~iTiFSa~~Y~~~~ 273 (346)
+.-+++..+.||.+.| +..-|||+-.++..+.+..+ +.+|.||.+.
T Consensus 20 ~~~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~C 74 (158)
T PF10083_consen 20 YDKNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNC 74 (158)
T ss_pred cccCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhC
Confidence 3445677788888877 44558998887655544333 5699999743
No 141
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=22.24 E-value=74 Score=30.39 Aligned_cols=39 Identities=26% Similarity=0.473 Sum_probs=25.0
Q ss_pred eEEEeccccCCCCCcHHHH-HHHHHHHHhcCCcEEEeCCCcccc
Q 019125 83 NYLFLGDYVDRGKQSIETI-CLLLAYKVKYKENFFLLRGNHECA 125 (346)
Q Consensus 83 ~~vfLGDyVDRG~~slevl-~lL~~lki~~p~~v~lLrGNHE~~ 125 (346)
+++|+||+|.+ ...+++ ..|-.+|.+++..+.+. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 68999999944 334433 45666777777665444 55554
No 142
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=21.78 E-value=41 Score=34.80 Aligned_cols=40 Identities=25% Similarity=0.397 Sum_probs=32.1
Q ss_pred eEEEeccccCCCCCcHHHHHHHHHHHHhcCCcEEEeCCCccccch
Q 019125 83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 127 (346)
Q Consensus 83 ~~vfLGDyVDRG~~slevl~lL~~lki~~p~~v~lLrGNHE~~~i 127 (346)
++=.+||+-||||++-.++.-|..+ + .+=+--||||-..+
T Consensus 193 hLHiVGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDilWm 232 (648)
T COG3855 193 HLHIVGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDILWM 232 (648)
T ss_pred heeeecccccCCCCchHHHHHHhhc----c-cccccccCcceEEe
Confidence 4557899999999999999888654 2 56677899998544
No 143
>PLN00084 photosystem II subunit S (PsbS); Provisional
Probab=21.76 E-value=52 Score=29.42 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=25.9
Q ss_pred eccccCCCCCcHHHHHHHHHHH-------HhcCCcEEEeCCCccc
Q 019125 87 LGDYVDRGKQSIETICLLLAYK-------VKYKENFFLLRGNHEC 124 (346)
Q Consensus 87 LGDyVDRG~~slevl~lL~~lk-------i~~p~~v~lLrGNHE~ 124 (346)
+||.|.||..++|-+.--..+. +-+|.++.++. ||=.
T Consensus 9 vgdvvtrg~gp~eql~de~~~igahassvlfhpprftlv~-nhvn 52 (214)
T PLN00084 9 VGDVVTRGAGPLEQLRDEEMFIGAHASSVLFHPPRFTLVM-NHIN 52 (214)
T ss_pred hhhhhccCCCcHHHhhhhHHHhhhcccccccCCccchhhh-ccCC
Confidence 7999999999999875433332 23677766665 7843
No 144
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=20.45 E-value=90 Score=29.58 Aligned_cols=57 Identities=25% Similarity=0.340 Sum_probs=31.3
Q ss_pred CcEEEeCCCccccchhhhcCChHHHHHHh-chhhHHhhchhhccCCceEEEc-CcEEEecCCCCC
Q 019125 113 ENFFLLRGNHECASINRIYGFYDECKRRF-NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSP 175 (346)
Q Consensus 113 ~~v~lLrGNHE~~~i~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGi~p 175 (346)
++|++|-||||.- .|..|.-.-. ..+. ...-| ..+..+|++-.-. .+++..|-||-.
T Consensus 128 knvvvlagnhein-~ngny~arla-nhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 128 KNVVVLAGNHEIN-FNGNYMARLA-NHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred cceEEEecCceec-cCchHHHHHh-hCCCCccchh----hccccccccccCcchhhhhcccCcee
Confidence 5899999999974 2222211100 0111 12223 2345677775433 368889999864
No 145
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.29 E-value=3.3e+02 Score=23.13 Aligned_cols=57 Identities=21% Similarity=0.177 Sum_probs=38.8
Q ss_pred HHHHHHHHHhCCCCCCceEEEeccccCCCCCc--------HHHHHHHHHHHHhcCCcEEEeC---CCcccc
Q 019125 66 FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS--------IETICLLLAYKVKYKENFFLLR---GNHECA 125 (346)
Q Consensus 66 ~~~L~~ll~~~g~~~~~~~vfLGDyVDRG~~s--------levl~lL~~lki~~p~~v~lLr---GNHE~~ 125 (346)
|+.|.+.++..+......++|+|+-.|++-+| .+|+.-. +| ..|..+++++ ||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~a--lk-~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEA--LK-HAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHH--HH-hCCCceEEEEEEecCCCcc
Confidence 67788888877666566678999999998776 3333322 33 5787766654 776664
Done!