Query 019128
Match_columns 346
No_of_seqs 499 out of 3564
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 11:21:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019128.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019128hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ddj_A CBS domain-containing p 100.0 1.4E-30 4.8E-35 233.5 15.3 200 11-243 13-213 (296)
2 3kh5_A Protein MJ1225; AMPK, A 100.0 9.5E-29 3.2E-33 219.5 16.3 195 20-242 6-203 (280)
3 2yzq_A Putative uncharacterize 100.0 2.4E-28 8.2E-33 217.3 13.0 178 18-240 1-180 (282)
4 3ddj_A CBS domain-containing p 100.0 4.8E-28 1.7E-32 217.0 13.9 189 16-246 91-287 (296)
5 3kh5_A Protein MJ1225; AMPK, A 100.0 1.2E-27 4E-32 212.5 16.3 184 17-241 83-278 (280)
6 3t4n_C Nuclear protein SNF4; C 99.9 3E-27 1E-31 214.4 15.7 207 14-243 25-247 (323)
7 3t4n_C Nuclear protein SNF4; C 99.9 3E-26 1E-30 207.8 17.1 189 20-245 116-321 (323)
8 2v8q_E 5'-AMP-activated protei 99.9 5.1E-27 1.7E-31 213.6 10.7 201 16-241 33-248 (330)
9 2qrd_G Protein C1556.08C; AMPK 99.9 1.4E-25 4.6E-30 204.5 16.5 208 15-242 19-241 (334)
10 2yzq_A Putative uncharacterize 99.9 7.7E-26 2.6E-30 201.0 13.8 187 16-241 58-276 (282)
11 2v8q_E 5'-AMP-activated protei 99.9 1.9E-24 6.4E-29 196.6 17.3 192 20-244 120-323 (330)
12 2qrd_G Protein C1556.08C; AMPK 99.9 3.6E-24 1.2E-28 195.0 18.6 187 23-246 112-317 (334)
13 3k6e_A CBS domain protein; str 99.9 2.7E-22 9.4E-27 162.2 13.6 129 119-249 15-147 (156)
14 3hf7_A Uncharacterized CBS-dom 99.9 3.3E-22 1.1E-26 156.8 10.8 126 119-246 2-129 (130)
15 4esy_A CBS domain containing m 99.9 1.9E-22 6.7E-27 165.6 9.0 142 15-173 15-157 (170)
16 3lhh_A CBS domain protein; str 99.9 1.3E-21 4.3E-26 161.0 13.6 130 116-250 39-170 (172)
17 3lfr_A Putative metal ION tran 99.9 2.6E-22 8.8E-27 158.6 8.2 129 119-250 3-133 (136)
18 3lv9_A Putative transporter; C 99.9 2.7E-21 9.3E-26 155.0 14.1 126 116-246 20-147 (148)
19 3i8n_A Uncharacterized protein 99.9 1.6E-21 5.5E-26 152.8 10.7 124 117-244 4-129 (130)
20 3jtf_A Magnesium and cobalt ef 99.9 2E-21 6.8E-26 152.0 11.1 123 118-246 4-128 (129)
21 3oco_A Hemolysin-like protein 99.9 3.7E-21 1.3E-25 155.1 12.0 130 117-251 18-150 (153)
22 3ocm_A Putative membrane prote 99.8 7.7E-21 2.6E-25 156.4 13.3 131 116-252 33-165 (173)
23 3l2b_A Probable manganase-depe 99.8 7.6E-21 2.6E-25 165.5 13.1 219 16-241 5-241 (245)
24 3nqr_A Magnesium and cobalt ef 99.8 3.2E-21 1.1E-25 150.4 9.2 122 119-244 3-126 (127)
25 4esy_A CBS domain containing m 99.8 6.9E-21 2.4E-25 156.3 9.5 127 113-243 12-161 (170)
26 2ef7_A Hypothetical protein ST 99.8 1.2E-19 4E-24 142.5 15.8 125 118-246 3-127 (133)
27 3lv9_A Putative transporter; C 99.8 1.8E-19 6E-24 144.3 14.6 128 7-177 12-144 (148)
28 3gby_A Uncharacterized protein 99.8 6.3E-20 2.2E-24 143.2 11.5 122 118-243 4-125 (128)
29 3ctu_A CBS domain protein; str 99.8 8.9E-20 3E-24 147.4 12.7 131 116-248 12-146 (156)
30 2rc3_A CBS domain; in SITU pro 99.8 8.5E-20 2.9E-24 143.8 12.1 124 120-244 7-131 (135)
31 3fv6_A YQZB protein; CBS domai 99.8 3.9E-19 1.3E-23 144.1 15.6 133 111-247 9-147 (159)
32 1pbj_A Hypothetical protein; s 99.8 2E-19 6.8E-24 139.5 12.6 120 120-243 2-121 (125)
33 2yzi_A Hypothetical protein PH 99.8 2.8E-19 9.4E-24 141.3 13.5 128 117-248 5-133 (138)
34 3kpb_A Uncharacterized protein 99.8 2.2E-19 7.4E-24 138.8 12.5 116 120-242 2-118 (122)
35 2rih_A Conserved protein with 99.8 3.9E-19 1.3E-23 141.1 14.2 119 119-242 5-126 (141)
36 3lqn_A CBS domain protein; csg 99.8 1.5E-19 5.1E-24 145.0 11.8 129 116-247 12-146 (150)
37 3lhh_A CBS domain protein; str 99.8 3.1E-19 1.1E-23 146.7 13.5 128 8-178 32-164 (172)
38 3fhm_A Uncharacterized protein 99.8 8.2E-20 2.8E-24 149.1 9.9 130 116-246 21-152 (165)
39 4fry_A Putative signal-transdu 99.8 1.4E-19 4.7E-24 146.4 11.1 129 119-248 7-139 (157)
40 3k2v_A Putative D-arabinose 5- 99.8 2E-19 6.8E-24 144.2 11.6 121 118-240 27-148 (149)
41 2p9m_A Hypothetical protein MJ 99.8 4.4E-19 1.5E-23 140.1 13.1 125 116-244 5-136 (138)
42 3oi8_A Uncharacterized protein 99.8 6.3E-20 2.2E-24 148.3 8.3 119 116-239 35-155 (156)
43 1vr9_A CBS domain protein/ACT 99.8 2E-19 7E-24 153.0 11.5 163 15-228 10-175 (213)
44 3i8n_A Uncharacterized protein 99.8 3.2E-19 1.1E-23 139.6 11.4 122 14-177 2-128 (130)
45 4gqw_A CBS domain-containing p 99.8 2.3E-19 8E-24 143.9 10.5 127 119-246 5-145 (152)
46 3fhm_A Uncharacterized protein 99.8 8.5E-19 2.9E-23 143.0 12.9 131 10-179 16-150 (165)
47 2emq_A Hypothetical conserved 99.8 1.2E-18 4.1E-23 140.8 13.3 130 116-248 8-143 (157)
48 3sl7_A CBS domain-containing p 99.8 6.5E-19 2.2E-23 145.6 11.9 129 119-247 4-159 (180)
49 1y5h_A Hypothetical protein RV 99.8 1.9E-19 6.6E-24 141.3 8.1 120 119-241 8-128 (133)
50 1o50_A CBS domain-containing p 99.8 2.1E-18 7.1E-23 139.5 14.3 124 120-246 17-155 (157)
51 3oco_A Hemolysin-like protein 99.8 5.9E-19 2E-23 142.1 11.0 130 1-177 7-142 (153)
52 2o16_A Acetoin utilization pro 99.8 1.4E-18 4.7E-23 141.1 12.7 126 118-246 4-137 (160)
53 3kpb_A Uncharacterized protein 99.8 1.8E-18 6.1E-23 133.6 12.2 117 18-178 1-119 (122)
54 3kxr_A Magnesium transporter, 99.8 4.4E-18 1.5E-22 143.6 15.6 122 116-246 51-176 (205)
55 3jtf_A Magnesium and cobalt ef 99.8 8.1E-19 2.8E-23 137.1 10.3 118 16-177 3-125 (129)
56 2ef7_A Hypothetical protein ST 99.8 2.6E-18 9E-23 134.7 13.0 121 16-176 2-123 (133)
57 1yav_A Hypothetical protein BS 99.8 1.6E-18 5.6E-23 140.4 12.1 129 116-247 11-145 (159)
58 2nyc_A Nuclear protein SNF4; b 99.8 2.4E-18 8.3E-23 136.7 12.8 123 119-244 8-141 (144)
59 1pbj_A Hypothetical protein; s 99.8 2.2E-18 7.4E-23 133.6 12.0 121 18-178 1-121 (125)
60 3nqr_A Magnesium and cobalt ef 99.8 3.3E-19 1.1E-23 138.9 7.3 117 17-175 2-123 (127)
61 3ocm_A Putative membrane prote 99.8 3.3E-18 1.1E-22 140.6 13.3 127 8-178 26-157 (173)
62 3gby_A Uncharacterized protein 99.8 1E-18 3.4E-23 136.3 9.6 122 16-178 3-125 (128)
63 1pvm_A Conserved hypothetical 99.8 2.8E-18 9.7E-23 142.5 12.6 122 119-242 9-131 (184)
64 2uv4_A 5'-AMP-activated protei 99.8 5.8E-18 2E-22 136.1 13.6 118 120-242 24-149 (152)
65 3k6e_A CBS domain protein; str 99.8 2.3E-18 7.9E-23 139.1 11.2 124 16-176 13-140 (156)
66 2o16_A Acetoin utilization pro 99.8 6.1E-18 2.1E-22 137.2 13.6 128 16-174 3-131 (160)
67 4fry_A Putative signal-transdu 99.8 4.3E-18 1.5E-22 137.6 12.6 138 18-194 7-150 (157)
68 3hf7_A Uncharacterized CBS-dom 99.8 4.3E-18 1.5E-22 133.2 11.7 121 17-177 1-126 (130)
69 3kxr_A Magnesium transporter, 99.8 3E-18 1E-22 144.6 11.6 123 9-176 45-172 (205)
70 3fv6_A YQZB protein; CBS domai 99.8 8.9E-18 3E-22 136.1 13.9 125 14-176 13-142 (159)
71 2j9l_A Chloride channel protei 99.8 5.9E-18 2E-22 140.5 12.5 131 115-246 7-167 (185)
72 3oi8_A Uncharacterized protein 99.8 5.8E-19 2E-23 142.7 5.8 123 8-173 28-155 (156)
73 2yzi_A Hypothetical protein PH 99.8 1.2E-17 4E-22 131.9 13.0 126 13-179 2-129 (138)
74 2rc3_A CBS domain; in SITU pro 99.8 8.4E-18 2.9E-22 132.2 12.2 123 17-178 4-130 (135)
75 3lfr_A Putative metal ION tran 99.7 1.5E-18 5.1E-23 136.9 7.6 117 17-174 2-123 (136)
76 2rih_A Conserved protein with 99.7 1.8E-17 6E-22 131.4 13.4 116 17-173 4-123 (141)
77 1o50_A CBS domain-containing p 99.7 1.4E-17 4.7E-22 134.6 12.9 141 11-176 9-151 (157)
78 3k2v_A Putative D-arabinose 5- 99.7 1.6E-17 5.4E-22 133.0 12.5 117 18-173 28-147 (149)
79 2pfi_A Chloride channel protei 99.7 1.7E-17 5.7E-22 134.9 12.6 132 13-177 8-146 (164)
80 2p9m_A Hypothetical protein MJ 99.7 7.8E-18 2.7E-22 132.8 10.2 121 15-175 5-133 (138)
81 2pfi_A Chloride channel protei 99.7 2.4E-17 8.3E-22 133.9 12.6 126 117-246 11-149 (164)
82 4gqw_A CBS domain-containing p 99.7 1.9E-17 6.6E-22 132.6 11.4 134 16-177 3-142 (152)
83 3lqn_A CBS domain protein; csg 99.7 1.3E-17 4.5E-22 133.6 10.1 127 14-176 11-141 (150)
84 2emq_A Hypothetical conserved 99.7 6E-17 2.1E-21 130.7 12.8 130 13-179 6-139 (157)
85 2d4z_A Chloride channel protei 99.7 2.6E-16 8.7E-21 136.3 17.4 161 14-178 9-245 (250)
86 1y5h_A Hypothetical protein RV 99.7 5.5E-18 1.9E-22 132.9 6.4 121 15-173 5-126 (133)
87 2j9l_A Chloride channel protei 99.7 7.2E-17 2.5E-21 133.9 13.4 149 14-177 7-164 (185)
88 2nyc_A Nuclear protein SNF4; b 99.7 5.8E-17 2E-21 128.7 12.1 127 15-177 5-140 (144)
89 1vr9_A CBS domain protein/ACT 99.7 1.1E-16 3.7E-21 136.1 14.2 117 119-244 13-130 (213)
90 2yvy_A MGTE, Mg2+ transporter 99.7 8.8E-17 3E-21 142.3 13.4 120 117-245 133-258 (278)
91 3ctu_A CBS domain protein; str 99.7 2.9E-17 1E-21 132.5 9.4 127 14-178 11-141 (156)
92 3sl7_A CBS domain-containing p 99.7 2.4E-17 8.1E-22 136.1 8.6 149 17-177 3-155 (180)
93 2oux_A Magnesium transporter; 99.7 1.1E-16 3.6E-21 142.2 13.0 121 117-246 135-261 (286)
94 1pvm_A Conserved hypothetical 99.7 1E-16 3.6E-21 133.0 11.8 119 17-173 8-128 (184)
95 2uv4_A 5'-AMP-activated protei 99.7 1.3E-16 4.4E-21 128.2 11.6 126 13-177 18-149 (152)
96 1yav_A Hypothetical protein BS 99.7 8.9E-17 3.1E-21 130.1 9.4 127 14-176 10-140 (159)
97 2oux_A Magnesium transporter; 99.7 1.3E-16 4.6E-21 141.6 10.9 121 10-175 129-256 (286)
98 2yvy_A MGTE, Mg2+ transporter 99.7 3.2E-16 1.1E-20 138.7 11.5 120 12-177 129-255 (278)
99 2d4z_A Chloride channel protei 99.7 4.5E-16 1.5E-20 134.7 12.0 125 117-244 11-246 (250)
100 2zy9_A Mg2+ transporter MGTE; 99.6 1.6E-15 5.6E-20 143.5 13.9 119 117-244 153-277 (473)
101 3org_A CMCLC; transporter, tra 99.6 9.6E-17 3.3E-21 157.3 5.3 122 118-241 452-622 (632)
102 3pc3_A CG1753, isoform A; CBS, 99.6 8.1E-16 2.8E-20 147.9 10.8 124 118-246 383-513 (527)
103 2zy9_A Mg2+ transporter MGTE; 99.6 3.8E-15 1.3E-19 141.0 11.8 122 9-175 146-274 (473)
104 3pc3_A CG1753, isoform A; CBS, 99.6 2.1E-15 7.1E-20 145.1 9.3 124 14-179 380-511 (527)
105 3usb_A Inosine-5'-monophosphat 99.6 1E-14 3.5E-19 138.9 12.8 115 121-243 115-233 (511)
106 4af0_A Inosine-5'-monophosphat 99.6 5.6E-17 1.9E-21 150.4 -3.4 146 82-241 105-255 (556)
107 4fxs_A Inosine-5'-monophosphat 99.6 4.2E-16 1.4E-20 147.9 1.9 114 120-241 90-206 (496)
108 3usb_A Inosine-5'-monophosphat 99.6 1.7E-14 5.9E-19 137.3 11.9 160 19-227 114-279 (511)
109 1me8_A Inosine-5'-monophosphat 99.5 5.9E-16 2E-20 147.5 0.7 168 18-231 96-269 (503)
110 3org_A CMCLC; transporter, tra 99.5 1.1E-14 3.7E-19 142.7 9.0 156 16-173 451-620 (632)
111 1zfj_A Inosine monophosphate d 99.5 1.5E-13 5E-18 131.2 13.9 115 121-243 92-210 (491)
112 3ghd_A A cystathionine beta-sy 99.5 9.3E-14 3.2E-18 95.5 8.4 69 131-199 2-70 (70)
113 4avf_A Inosine-5'-monophosphat 99.5 3.1E-15 1E-19 141.8 0.1 114 121-242 90-205 (490)
114 1me8_A Inosine-5'-monophosphat 99.5 3.3E-15 1.1E-19 142.4 0.1 114 125-245 103-222 (503)
115 4avf_A Inosine-5'-monophosphat 99.4 4.6E-14 1.6E-18 133.8 5.1 117 18-177 88-205 (490)
116 4fxs_A Inosine-5'-monophosphat 99.4 7E-14 2.4E-18 132.6 5.7 114 18-173 89-204 (496)
117 1vrd_A Inosine-5'-monophosphat 99.4 1.5E-14 5E-19 138.1 0.2 116 121-244 97-215 (494)
118 1vrd_A Inosine-5'-monophosphat 99.4 8.8E-14 3E-18 132.7 5.0 117 19-178 96-214 (494)
119 1zfj_A Inosine monophosphate d 99.4 1E-11 3.5E-16 118.4 16.4 116 19-178 91-210 (491)
120 2cu0_A Inosine-5'-monophosphat 99.4 7.5E-14 2.6E-18 132.7 0.2 112 121-242 95-206 (486)
121 4af0_A Inosine-5'-monophosphat 99.3 4.4E-13 1.5E-17 124.5 2.7 107 22-173 142-253 (556)
122 1jcn_A Inosine monophosphate d 99.3 6.4E-14 2.2E-18 134.2 -4.7 116 120-241 109-230 (514)
123 2cu0_A Inosine-5'-monophosphat 99.3 6.5E-13 2.2E-17 126.2 2.1 162 20-234 95-258 (486)
124 1jcn_A Inosine monophosphate d 99.2 6.9E-13 2.3E-17 127.1 0.2 116 18-173 108-228 (514)
125 3fio_A A cystathionine beta-sy 99.1 2.1E-10 7.2E-15 78.7 8.4 69 131-199 2-70 (70)
126 3ghd_A A cystathionine beta-sy 99.1 2E-11 6.9E-16 83.7 3.1 46 27-72 1-46 (70)
127 3l2b_A Probable manganase-depe 99.0 2.8E-09 9.5E-14 92.1 10.9 58 118-177 6-64 (245)
128 3fio_A A cystathionine beta-sy 98.6 8.4E-08 2.9E-12 65.4 6.4 47 195-242 1-47 (70)
129 2pli_A Uncharacterized protein 97.7 2E-05 6.9E-10 56.5 2.7 52 269-328 35-87 (91)
130 3llb_A Uncharacterized protein 97.6 1.7E-05 5.7E-10 55.9 1.7 53 268-328 25-78 (83)
131 3lae_A UPF0053 protein HI0107; 97.6 1.9E-05 6.4E-10 55.3 1.4 51 268-326 25-76 (81)
132 2pls_A CBS domain protein; APC 97.5 3E-05 1E-09 55.0 1.9 45 276-328 37-82 (86)
133 2r2z_A Hemolysin; APC85144, en 97.5 3.9E-05 1.3E-09 55.2 2.2 52 269-328 33-87 (93)
134 2oai_A Hemolysin; PFAM03471, x 97.5 2.8E-05 9.7E-10 56.0 1.4 45 276-328 45-90 (94)
135 2p13_A CBS domain; alpha-beta 97.5 4E-05 1.4E-09 54.8 1.9 50 270-327 33-85 (90)
136 2o3g_A Putative protein; APC85 97.5 3E-05 1E-09 55.7 1.2 54 267-328 32-88 (92)
137 2p3h_A Uncharacterized CBS dom 97.4 3.7E-05 1.3E-09 56.0 1.4 50 270-328 30-85 (101)
138 2p4p_A Hypothetical protein HD 97.4 5E-05 1.7E-09 53.8 1.9 53 268-328 25-80 (86)
139 2rk5_A Putative hemolysin; str 97.4 4.2E-05 1.4E-09 54.3 1.0 52 269-328 25-83 (87)
140 2nqw_A CBS domain protein; PFA 97.3 9.3E-05 3.2E-09 53.2 2.4 45 276-328 44-89 (93)
141 3ded_A Probable hemolysin; str 97.1 0.00011 3.6E-09 54.8 1.1 44 276-327 64-108 (113)
142 1tif_A IF3-N, translation init 59.0 17 0.0006 24.4 4.7 25 217-241 13-37 (78)
143 1svj_A Potassium-transporting 38.0 28 0.00097 26.8 3.6 33 37-69 121-153 (156)
144 1tif_A IF3-N, translation init 29.6 1.2E+02 0.0041 20.2 5.1 30 152-181 13-43 (78)
145 1p0z_A Sensor kinase CITA; tra 29.5 39 0.0013 24.8 3.0 16 220-235 106-121 (131)
146 3by8_A Sensor protein DCUS; hi 28.9 39 0.0013 25.2 3.0 21 219-239 110-130 (142)
147 1svj_A Potassium-transporting 26.5 66 0.0022 24.7 3.9 35 139-173 120-154 (156)
148 3fan_A Non-structural protein; 25.3 35 0.0012 27.6 2.2 25 216-240 125-149 (213)
149 2w5e_A Putative serine proteas 24.4 44 0.0015 25.8 2.6 23 213-235 122-144 (163)
150 3tjo_A Serine protease HTRA1; 23.6 44 0.0015 27.4 2.6 21 216-236 187-207 (231)
151 3lgi_A Protease DEGS; stress-s 21.5 48 0.0016 27.2 2.4 22 214-235 172-193 (237)
152 3sti_A Protease DEGQ; serine p 20.1 57 0.002 27.1 2.6 21 215-235 184-204 (245)
No 1
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=1.4e-30 Score=233.50 Aligned_cols=200 Identities=20% Similarity=0.262 Sum_probs=168.5
Q ss_pred hcCCCCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhh
Q 019128 11 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 90 (346)
Q Consensus 11 ~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~ 90 (346)
.+.+....+|+|+|+++++++++++|+.+|++.|.+++++++||+| |+++|++|..|+++.+....
T Consensus 13 ~~~~~~~~~V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~~l~GivT~~Di~~~~~~~~------------- 78 (296)
T 3ddj_A 13 ENLYFQGMNIETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-EKIEGLLTTRDLLSTVESYC------------- 78 (296)
T ss_dssp -CCTTCCSSGGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-SSEEEEEEHHHHHGGGTTCC-------------
T ss_pred hhhhhcccCHHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-CeEEEEEeHHHHHHHhcccc-------------
Confidence 4557788999999999999999999999999999999999999999 99999999999987532100
Q ss_pred hhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeH
Q 019128 91 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 169 (346)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~ 169 (346)
. ...+...+.. ....+++++|.+ +++++.+++++.++++.|.+++++++||+| +|+++|++|.
T Consensus 79 ------------~-~~~~~~~~~~-~~~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~ 142 (296)
T 3ddj_A 79 ------------K-DSCSQGDLYH-ISTTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTE 142 (296)
T ss_dssp ----------------CCHHHHHH-HHTSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred ------------c-ccccchhhHH-HhcccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeH
Confidence 0 0011112211 224679999985 788999999999999999999999999998 7899999999
Q ss_pred HHHHHHHHhcCCCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHH
Q 019128 170 KDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 243 (346)
Q Consensus 170 ~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~ 243 (346)
+|++ +.+..... ..++.++|.+++.++++++++.++++.|.+++++++||+|++|+++|+||..|+++++.
T Consensus 143 ~dl~-~~~~~~~~--~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 143 REFL-LLYKDLDE--IFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HHHG-GGGGGSCC--CCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HHHH-Hhhhcccc--cccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 9997 54443322 45899999999999999999999999999999999999999999999999999998754
No 2
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.96 E-value=9.5e-29 Score=219.51 Aligned_cols=195 Identities=19% Similarity=0.298 Sum_probs=158.5
Q ss_pred ccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee--CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhhc
Q 019128 20 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 97 (346)
Q Consensus 20 v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd--~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (346)
.+.+|+++++++++++|+.+|+++|.+++++++||+| +|+++|++|.+|+++.+...... .. +...
T Consensus 6 ~~~i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~---------~~---~~~~ 73 (280)
T 3kh5_A 6 MKIAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKY---------NL---IREK 73 (280)
T ss_dssp GGTSCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGG---------HH---HHTT
T ss_pred HHHhcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchh---------hh---hhhc
Confidence 3456778999999999999999999999999999998 59999999999998753110000 00 0000
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHH
Q 019128 98 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRV 176 (346)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~ 176 (346)
....+.. ....+++++|.+ +++++++++++.++++.|.+++++++||+| +|+++|++|.+|++ +.
T Consensus 74 ----------~~~~~~~-~~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~ 139 (280)
T 3kh5_A 74 ----------HERNFLA-AINEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVI-RA 139 (280)
T ss_dssp ----------STTCHHH-HTTSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHH-HH
T ss_pred ----------cccchhH-HhhhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHH-HH
Confidence 0001111 124679999985 788999999999999999999999999998 89999999999998 55
Q ss_pred HhcCCCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 177 ISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 177 ~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
+...... ..++.++|.+++.++++++++.++++.|.+++++++||+ ++|+++|+||..|+++++
T Consensus 140 ~~~~~~~-~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~ 203 (280)
T 3kh5_A 140 LLDKIDE-NEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLL 203 (280)
T ss_dssp HGGGSCT-TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHH
T ss_pred HhhcCCC-CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHH
Confidence 5544332 458999999999999999999999999999999999999 689999999999999864
No 3
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.95 E-value=2.4e-28 Score=217.28 Aligned_cols=178 Identities=27% Similarity=0.385 Sum_probs=140.7
Q ss_pred ccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhh
Q 019128 18 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 96 (346)
Q Consensus 18 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (346)
++|+++|+++++++++++|+.+|++.|.+++++++||+| +|+++|+++..|++...
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~----------------------- 57 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNP----------------------- 57 (282)
T ss_dssp CBHHHHSEESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC---------------------------
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhh-----------------------
Confidence 478999999999999999999999999999999999999 89999999999987531
Q ss_pred ccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHH
Q 019128 97 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 175 (346)
Q Consensus 97 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~ 175 (346)
...+++++|.+ +++++++++++.++++.|.+++.+++||++ +|+++|++|.+|++++
T Consensus 58 --------------------~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~ 115 (282)
T 2yzq_A 58 --------------------DEEQLAMLVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRR 115 (282)
T ss_dssp --------------------------CCCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred --------------------ccCCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 12457788875 688999999999999999999999999999 6899999999999831
Q ss_pred HHhcCCCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHH
Q 019128 176 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 240 (346)
Q Consensus 176 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~ 240 (346)
.+..+......+++++|.+++.++++++++.++++.|.+++++++||+|++|+++|+||..|+++
T Consensus 116 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~ 180 (282)
T 2yzq_A 116 YFAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 180 (282)
T ss_dssp TTTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGG
T ss_pred HHhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhh
Confidence 55433222356889999999999999999999999999999999999999999999999999983
No 4
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.95 E-value=4.8e-28 Score=216.96 Aligned_cols=189 Identities=21% Similarity=0.211 Sum_probs=163.5
Q ss_pred CcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhh
Q 019128 16 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 94 (346)
Q Consensus 16 ~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 94 (346)
...+++++|+++++++.+++++.+|++.|.+++++++||+| +|+++|++|..|+++.+.
T Consensus 91 ~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~-------------------- 150 (296)
T 3ddj_A 91 STTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYK-------------------- 150 (296)
T ss_dssp HTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGG--------------------
T ss_pred hcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhh--------------------
Confidence 36789999999999999999999999999999999999998 799999999999875310
Q ss_pred hhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHH
Q 019128 95 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 173 (346)
Q Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll 173 (346)
......+++++|.+ +++++++++++.++++.|.+++++++||+| +|+++|++|.+|++
T Consensus 151 -------------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~ 209 (296)
T 3ddj_A 151 -------------------DLDEIFPVKVFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAI 209 (296)
T ss_dssp -------------------GSCCCCBHHHHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHH
T ss_pred -------------------cccccccHHHhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHH
Confidence 01123467788863 788999999999999999999999999999 89999999999998
Q ss_pred HHHHhcCC------CccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 174 MRVISQNL------PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 174 ~~~~~~~~------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
+.+.... .....++.++|.++++++++++++.++++.|.+++++++||+|++|+++|+||..||++++...+
T Consensus 210 -~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~ 287 (296)
T 3ddj_A 210 -KQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHIL 287 (296)
T ss_dssp -HHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred -HHHHHHHhhcChhhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHh
Confidence 4433110 01246899999999999999999999999999999999999999999999999999999876654
No 5
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.95 E-value=1.2e-27 Score=212.47 Aligned_cols=184 Identities=17% Similarity=0.269 Sum_probs=160.5
Q ss_pred cccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhh
Q 019128 17 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 95 (346)
Q Consensus 17 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (346)
..+++++|+++++++++++++.+|++.|.+++++++||+| +|+++|++|..|+++.+..
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~-------------------- 142 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLD-------------------- 142 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGG--------------------
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhh--------------------
Confidence 5699999999999999999999999999999999999998 7999999999998765211
Q ss_pred hccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHH
Q 019128 96 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 175 (346)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~ 175 (346)
......++.++|.+ ++.++++++++.++++.|.+++++++||+++|+++|++|.+|++ +
T Consensus 143 ------------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~-~ 201 (280)
T 3kh5_A 143 ------------------KIDENEVIDDYITR--DVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFI-K 201 (280)
T ss_dssp ------------------GSCTTCBSGGGCBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-H
T ss_pred ------------------cCCCCCCHHHHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH-H
Confidence 00112368888874 78899999999999999999999999999999999999999998 5
Q ss_pred HHhcCC-----------CccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHH
Q 019128 176 VISQNL-----------PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 241 (346)
Q Consensus 176 ~~~~~~-----------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~ 241 (346)
.+..+. .....++.++|++++.++++++++.++++.|.+++++++||+|++|+++|+||..||+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~ 278 (280)
T 3kh5_A 202 LLGSDWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKY 278 (280)
T ss_dssp HHTSHHHHHHHHSCCTHHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGG
T ss_pred HHhhhhhhhhhcccchhhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHh
Confidence 443211 012468999999999999999999999999999999999999999999999999999875
No 6
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.95 E-value=3e-27 Score=214.44 Aligned_cols=207 Identities=16% Similarity=0.231 Sum_probs=158.0
Q ss_pred CC-Cccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhhHh
Q 019128 14 NL-EETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIA 88 (346)
Q Consensus 14 ~~-~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~~~~~~ 88 (346)
++ ...++.|+|. .++++++.++|+.+|++.|.+++++++||+| + ++++|++|.+|++..+...... ..
T Consensus 25 ~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~----~~--- 97 (323)
T 3t4n_C 25 KFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSN----PD--- 97 (323)
T ss_dssp HHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHC----GG---
T ss_pred HHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcC----cc---
Confidence 44 7789999998 4578899999999999999999999999999 4 5999999999998865432211 00
Q ss_pred hhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCE-----
Q 019128 89 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK----- 162 (346)
Q Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~----- 162 (346)
..+.+... ....+.+.+ .+.++|. ++++++++++++.++++.|.+++++++||++ ++.
T Consensus 98 -~~~~l~~~----------~~~~v~~i~---~~~~~~~--~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~ 161 (323)
T 3t4n_C 98 -KFELVDKL----------QLDGLKDIE---RALGVDQ--LDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREI 161 (323)
T ss_dssp -GGGGGGGC----------BHHHHHHHH---HHTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEE
T ss_pred -hhHHHHHH----------HHHHHHHHH---HHhCCCC--CCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccc
Confidence 00000000 011122221 1234454 4788999999999999999999999999999 553
Q ss_pred EEEEeeHHHHHHHHHhcC--CCccccccccc---cccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHH
Q 019128 163 PRGILTSKDILMRVISQN--LPADSTLVEKV---MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 237 (346)
Q Consensus 163 ~~Giit~~dll~~~~~~~--~~~~~~~v~~~---m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~D 237 (346)
++|++|.+|++..+.... ......++.++ |.++++++++++++.++++.|.+++++++||+|++|+++|+||..|
T Consensus 162 l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~d 241 (323)
T 3t4n_C 162 VVSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYD 241 (323)
T ss_dssp EEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTH
T ss_pred eEEEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHH
Confidence 999999999984333221 11224588999 9899999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 019128 238 ITHAAV 243 (346)
Q Consensus 238 i~~~~~ 243 (346)
+++++.
T Consensus 242 l~~~~~ 247 (323)
T 3t4n_C 242 VLGLIK 247 (323)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998743
No 7
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.94 E-value=3e-26 Score=207.83 Aligned_cols=189 Identities=15% Similarity=0.182 Sum_probs=156.8
Q ss_pred ccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCe-----EEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhh
Q 019128 20 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGE-----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 93 (346)
Q Consensus 20 v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~-----~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
+.++|.++++++++++++.+|++.|.+++++++||+| +++ ++|++|.+|+++.+......
T Consensus 116 ~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-------------- 181 (323)
T 3t4n_C 116 ALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-------------- 181 (323)
T ss_dssp HTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG--------------
T ss_pred HhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc--------------
Confidence 4456688999999999999999999999999999998 554 99999999998764321100
Q ss_pred hhhccCCCCCChhhHHHHHHHHhCCCCcccc---ccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeH
Q 019128 94 VEKHWGTSISGPNTFIETLRERMFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 169 (346)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~i---m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~ 169 (346)
......+++++ |. ++++++.+++++.++++.|.+++++++||+| +|+++|++|.
T Consensus 182 --------------------~~~~~~~v~~~~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~ 239 (323)
T 3t4n_C 182 --------------------THFLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEA 239 (323)
T ss_dssp --------------------GGGCCSBGGGTTCSBC--TTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEET
T ss_pred --------------------hhhhhCcHHHcCCCCC--CCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeH
Confidence 11234567888 75 4789999999999999999999999999999 7999999999
Q ss_pred HHHHHHHHhcCC-Ccccccccccccc------CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 170 KDILMRVISQNL-PADSTLVEKVMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 170 ~dll~~~~~~~~-~~~~~~v~~~m~~------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
+|++ +++..+. .....+++++|++ +++++++++++.++++.|.+++++++||+|++|+++|+||..||++++
T Consensus 240 ~dl~-~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l 318 (323)
T 3t4n_C 240 YDVL-GLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYI 318 (323)
T ss_dssp THHH-HHHHTTHHHHTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HHHH-HHHhhchhhhccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHH
Confidence 9998 5554432 1225689999987 789999999999999999999999999999999999999999999987
Q ss_pred HHH
Q 019128 243 VAT 245 (346)
Q Consensus 243 ~~~ 245 (346)
++.
T Consensus 319 ~~~ 321 (323)
T 3t4n_C 319 LLG 321 (323)
T ss_dssp HHC
T ss_pred Hhc
Confidence 653
No 8
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.94 E-value=5.1e-27 Score=213.60 Aligned_cols=201 Identities=21% Similarity=0.253 Sum_probs=156.3
Q ss_pred Ccccccccc--cCCCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhh
Q 019128 16 EETPVSKVM--TRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 91 (346)
Q Consensus 16 ~~~~v~dim--~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~ 91 (346)
...+|+|+| .++++++++++|+.+|++.|.+++++++||+| + ++++|++|.+|++..+.......... .
T Consensus 33 ~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~-------~ 105 (330)
T 2v8q_E 33 KSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQ-------I 105 (330)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTT-------C
T ss_pred HcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccc-------h
Confidence 567999999 78899999999999999999999999999999 5 78999999999987654322111000 0
Q ss_pred hhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe--CCEEEEEeeH
Q 019128 92 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTS 169 (346)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d--~~~~~Giit~ 169 (346)
..+. ... ...+.. .++++|.+ +++++++++++.++++.|.+++++++||++ +|+++|++|.
T Consensus 106 ~~l~---------~~~-~~~~~~-----~~~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~ 168 (330)
T 2v8q_E 106 YELE---------EHK-IETWRE-----VYLQDSFK--PLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTH 168 (330)
T ss_dssp CCGG---------GCB-HHHHHH-----HHSSSSCC--CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECH
T ss_pred hHHh---------hcc-HHHHHH-----HHhhcccC--CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcH
Confidence 0000 000 111111 24567763 789999999999999999999999999998 6899999999
Q ss_pred HHHHHHHHhcCCC------ccccccccc--cc-cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHH
Q 019128 170 KDILMRVISQNLP------ADSTLVEKV--MT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 240 (346)
Q Consensus 170 ~dll~~~~~~~~~------~~~~~v~~~--m~-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~ 240 (346)
+|++ +++..... ....+++++ |. +++.++++++++.++++.|.+++++++||+|++|+++|+||..|+++
T Consensus 169 ~dl~-~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~ 247 (330)
T 2v8q_E 169 KRIL-KFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVIN 247 (330)
T ss_dssp HHHH-HHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGG
T ss_pred HHHH-HHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHH
Confidence 9998 44432111 012344554 54 78999999999999999999999999999999999999999999997
Q ss_pred H
Q 019128 241 A 241 (346)
Q Consensus 241 ~ 241 (346)
.
T Consensus 248 ~ 248 (330)
T 2v8q_E 248 L 248 (330)
T ss_dssp G
T ss_pred H
Confidence 5
No 9
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.93 E-value=1.4e-25 Score=204.46 Aligned_cols=208 Identities=13% Similarity=0.175 Sum_probs=155.9
Q ss_pred CCcccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhh
Q 019128 15 LEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 90 (346)
Q Consensus 15 ~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~ 90 (346)
+...+|+|+|++ +++++++++|+.+|++.|.+++++++||+| + ++++|+|+.+|++..+........ ... .
T Consensus 19 l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~--~~~---~ 93 (334)
T 2qrd_G 19 IRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSS--FPE---A 93 (334)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCS--CGG---G
T ss_pred HhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccC--Ccc---H
Confidence 345899999975 478899999999999999999999999998 4 799999999999876543211000 000 0
Q ss_pred hhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CE----EE
Q 019128 91 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NK----PR 164 (346)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~----~~ 164 (346)
+..+. .. ....+.+. ++++|.+..+++++.+++++.++++.|.+++++++||++ + ++ ++
T Consensus 94 ~~~~~------~~----~~~~i~~~-----l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~ 158 (334)
T 2qrd_G 94 IAEID------KF----RLLGLREV-----ERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIV 158 (334)
T ss_dssp GGGGG------SC----BHHHHHHH-----HHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEE
T ss_pred HHHHh------hh----chhhHHHH-----HHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceE
Confidence 00000 00 01112211 124555323348999999999999999999999999998 4 34 99
Q ss_pred EEeeHHHHHHHHHhcC--CCcccccccc---ccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHH
Q 019128 165 GILTSKDILMRVISQN--LPADSTLVEK---VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 239 (346)
Q Consensus 165 Giit~~dll~~~~~~~--~~~~~~~v~~---~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~ 239 (346)
|++|.+|++..+.... ......++++ +|.+++.++++++++.++++.|.+++.+++||+|++|+++|+||..|++
T Consensus 159 Givt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~ 238 (334)
T 2qrd_G 159 SVLTQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVM 238 (334)
T ss_dssp EEEEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHH
T ss_pred EEeeHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHH
Confidence 9999999984333211 0112357788 5889999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 019128 240 HAA 242 (346)
Q Consensus 240 ~~~ 242 (346)
+++
T Consensus 239 ~~~ 241 (334)
T 2qrd_G 239 HLI 241 (334)
T ss_dssp HHH
T ss_pred HHh
Confidence 864
No 10
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.93 E-value=7.7e-26 Score=201.04 Aligned_cols=187 Identities=18% Similarity=0.239 Sum_probs=152.7
Q ss_pred CcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHH-HHHHHHHHHHhhhhhHhhhhhh
Q 019128 16 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLY-DAIARMERAAEKGKAIAAAVEG 93 (346)
Q Consensus 16 ~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~-~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
...+++++|.++++++++++++.+|++.|.+++.+.+||+| +|+++|++|..|+++ .+...
T Consensus 58 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~----------------- 120 (282)
T 2yzq_A 58 DEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKS----------------- 120 (282)
T ss_dssp ------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTC-----------------
T ss_pred ccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhcc-----------------
Confidence 36789999999899999999999999999999999999999 689999999999976 32100
Q ss_pred hhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHH
Q 019128 94 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 172 (346)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dl 172 (346)
......+++++|. .+++++++++++.++++.|.+++++++||++ +|+++|++|.+|+
T Consensus 121 --------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl 178 (282)
T 2yzq_A 121 --------------------EKYKGVEIEPYYQ--RYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDL 178 (282)
T ss_dssp --------------------SGGGGCBSTTTSB--SCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGG
T ss_pred --------------------CCcccCcHHHHhC--CCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHH
Confidence 0011345788886 3788999999999999999999999999998 8899999999999
Q ss_pred H------HHHH------hc-----------------CCCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEE
Q 019128 173 L------MRVI------SQ-----------------NLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVV 223 (346)
Q Consensus 173 l------~~~~------~~-----------------~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv 223 (346)
+ +.+. .. .......+++++|++++.++++++++.+|++.|.+++++++||+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 258 (282)
T 2yzq_A 179 LRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVI 258 (282)
T ss_dssp GGCGGGCC--------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred hhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEE
Confidence 7 2221 00 01112578999999999999999999999999999999999999
Q ss_pred cCCCcEEEEEehHHHHHH
Q 019128 224 DRDGDVVDVVDVIHITHA 241 (346)
Q Consensus 224 d~~g~~~Giit~~Di~~~ 241 (346)
|++|+++|+||..|++++
T Consensus 259 d~~~~lvGiit~~Dil~~ 276 (282)
T 2yzq_A 259 RGEGDLIGLIRDFDLLKV 276 (282)
T ss_dssp ETTTEEEEEEEHHHHGGG
T ss_pred CCCCCEEEEEeHHHHHHH
Confidence 988899999999999975
No 11
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.92 E-value=1.9e-24 Score=196.58 Aligned_cols=192 Identities=16% Similarity=0.214 Sum_probs=154.7
Q ss_pred ccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee--CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhhc
Q 019128 20 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 97 (346)
Q Consensus 20 v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd--~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (346)
++++|.++++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++++.....
T Consensus 120 ~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~------------------- 180 (330)
T 2v8q_E 120 YLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFIT------------------- 180 (330)
T ss_dssp HSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSC-------------------
T ss_pred HhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhh-------------------
Confidence 3577899999999999999999999999999999998 5899999999999876422100
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCcccc--ccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHH
Q 019128 98 WGTSISGPNTFIETLRERMFRPSLSTI--IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 174 (346)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~v~~i--m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~ 174 (346)
.. ... . ....++.++ |. ..+++++.+++++.++++.|.+++++++||++ +|+++|++|.+|++
T Consensus 181 --~~-~~~--------~-~~~~~v~~~~v~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~- 246 (330)
T 2v8q_E 181 --EF-PKP--------E-FMSKSLEELQIGT-YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI- 246 (330)
T ss_dssp --SS-SCC--------G-GGGSBHHHHTCSB-CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTG-
T ss_pred --cc-Cch--------h-hhcCCHHHhcccC-cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHH-
Confidence 00 000 0 001223333 32 13688999999999999999999999999999 89999999999998
Q ss_pred HHHhcC-CCcccccccccc------ccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 175 RVISQN-LPADSTLVEKVM------TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 175 ~~~~~~-~~~~~~~v~~~m------~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
+..... ......++.++| +++++++++++++.++++.|.+++++++||+|++|+++|+||..|+++++..
T Consensus 247 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 247 NLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp GGGGSSCCCCCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHS
T ss_pred HHHhccccccccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHh
Confidence 444432 222256788888 4899999999999999999999999999999999999999999999998654
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.92 E-value=3.6e-24 Score=195.03 Aligned_cols=187 Identities=16% Similarity=0.194 Sum_probs=155.9
Q ss_pred cccCCC--eeecCCccHHHHHHHHHhCCcceeeeee-CC-e----EEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhh
Q 019128 23 VMTRNP--TFVLSDTLAVEALQKMVQGKFRHLPVVE-NG-E----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 94 (346)
Q Consensus 23 im~~~~--i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~-~----~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 94 (346)
+|.+++ +++++++++.+|++.|.+++++++||+| +| + ++|++|..|+++.+.....
T Consensus 112 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~---------------- 175 (334)
T 2qrd_G 112 IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCK---------------- 175 (334)
T ss_dssp HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCG----------------
T ss_pred hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhcc----------------
Confidence 477677 9999999999999999999999999998 44 4 9999999999876432100
Q ss_pred hhccCCCCCChhhHHHHHHHHhCCCCccc---cccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHH
Q 019128 95 EKHWGTSISGPNTFIETLRERMFRPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 170 (346)
Q Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~---im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~ 170 (346)
.......++++ +|. +++.++++++++.++++.|.+++++++||++ +|+++|+||.+
T Consensus 176 ------------------~~~~~~~~v~~l~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~ 235 (334)
T 2qrd_G 176 ------------------ETAMLRVPLNQMTIGTW--SNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESV 235 (334)
T ss_dssp ------------------GGGGCCCBGGGSSCSBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETH
T ss_pred ------------------chhhhhCcHHHhCCccc--CCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHH
Confidence 00012345777 466 4788999999999999999999999999999 78999999999
Q ss_pred HHHHHHHhcCC-Ccccccccccccc------CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHH
Q 019128 171 DILMRVISQNL-PADSTLVEKVMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 243 (346)
Q Consensus 171 dll~~~~~~~~-~~~~~~v~~~m~~------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~ 243 (346)
|++ +.+..+. .....++.++|.+ ++.++++++++.++++.|.+++++++||+|++|+++|+||..|+++++.
T Consensus 236 dl~-~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~ 314 (334)
T 2qrd_G 236 DVM-HLIQDGDYSNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYII 314 (334)
T ss_dssp HHH-HHHTTSCGGGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHH-HHhhccccccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHH
Confidence 998 5554432 2235789999984 8999999999999999999999999999999999999999999999876
Q ss_pred HHc
Q 019128 244 ATV 246 (346)
Q Consensus 244 ~~i 246 (346)
...
T Consensus 315 ~~~ 317 (334)
T 2qrd_G 315 YDK 317 (334)
T ss_dssp SCC
T ss_pred hcc
Confidence 544
No 13
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.88 E-value=2.7e-22 Score=162.21 Aligned_cols=129 Identities=19% Similarity=0.246 Sum_probs=112.5
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCc---ccccccccccc
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPA---DSTLVEKVMTP 194 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~---~~~~v~~~m~~ 194 (346)
.++.++|+|+.+++++.+++|+.+|+++|.+++++++||+| +|+++|++|.+|+++.+....... ...++.++|.+
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC
Confidence 46899999999999999999999999999999999999999 799999999999985444433221 25689999999
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccCC
Q 019128 195 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNT 249 (346)
Q Consensus 195 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~~ 249 (346)
++.++++++++.++++.|.+++ .+||||++|+++|+||.+||++++.+.+.+.
T Consensus 95 ~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~~~~ 147 (156)
T 3k6e_A 95 DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHDF 147 (156)
T ss_dssp SCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHSCC-
T ss_pred CceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHhccc
Confidence 9999999999999999998876 4999999999999999999999987776543
No 14
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.87 E-value=3.3e-22 Score=156.78 Aligned_cols=126 Identities=17% Similarity=0.186 Sum_probs=110.9
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe--CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCC
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 196 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d--~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 196 (346)
.+++++|+++.+++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +....+......++.++| +++
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~-~~~~~~~~~~~~~v~~~m-~~~ 79 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAY-RLMTEKKEFTKEIMLRAA-DEI 79 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHH-HHHTSSSCCCHHHHHHHS-BCC
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHH-HHHhccCccchhhHHHhc-cCC
Confidence 35789998767899999999999999999999999999996 47999999999998 666554433346789999 789
Q ss_pred eeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 197 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 197 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
.++++++++.++++.|.+++++.+||+|++|+++|+||..|+++++++++
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~i 129 (130)
T 3hf7_A 80 YFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGDF 129 (130)
T ss_dssp CEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC--
T ss_pred eEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999988764
No 15
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.87 E-value=1.9e-22 Score=165.60 Aligned_cols=142 Identities=23% Similarity=0.318 Sum_probs=113.3
Q ss_pred CCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhh
Q 019128 15 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 93 (346)
Q Consensus 15 ~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
+.+++|+|+|+++++++++++|+.+|++.|.+++++++||+| +|+++|+||.+|+++.............
T Consensus 15 l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~--------- 85 (170)
T 4esy_A 15 IRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEI--------- 85 (170)
T ss_dssp HHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHH---------
T ss_pred HcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhh---------
Confidence 567999999999999999999999999999999999999998 8999999999999865321111000000
Q ss_pred hhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHH
Q 019128 94 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 173 (346)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll 173 (346)
... ...........+.....+++++|++ +++++++++++.+|+++|.+++++++||+++|+++|+||.+|++
T Consensus 86 ----~~~--~~~~~~~~~~~~~~~~~~v~~im~~--~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil 157 (170)
T 4esy_A 86 ----LSR--AIPAPEVEHLFETGRKLTASAVMTQ--PVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLL 157 (170)
T ss_dssp ----HTT--TSCHHHHHHHHHHHTTCBHHHHCBC--CSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHT
T ss_pred ----hhh--ccchhhHHhhhccccccchhhhccc--CcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHH
Confidence 000 0011223334445566789999985 89999999999999999999999999999999999999999998
No 16
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.87 E-value=1.3e-21 Score=161.04 Aligned_cols=130 Identities=14% Similarity=0.123 Sum_probs=113.6
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 193 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 193 (346)
+...+++++|+|+.+++++++++++.+|++.|.+++++++||++ + ++++|+||.+|++ +....+. ..++.++|
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~~---~~~v~~im- 113 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLL-SESIAGE---RLELVDLV- 113 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHH-HHHHTTC---CCCGGGGC-
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHH-HHHhhcC---cccHHHHh-
Confidence 34567999999767899999999999999999999999999999 5 8999999999998 5544432 56899999
Q ss_pred cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccCCC
Q 019128 194 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTA 250 (346)
Q Consensus 194 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~~~ 250 (346)
++++++++++++.++++.|.+++++++||+|++|+++|+||..|+++++++.+.++.
T Consensus 114 ~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~de~ 170 (172)
T 3lhh_A 114 KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQED 170 (172)
T ss_dssp BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC---
T ss_pred cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCcccc
Confidence 999999999999999999999999999999999999999999999999998886654
No 17
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.87 E-value=2.6e-22 Score=158.64 Aligned_cols=129 Identities=19% Similarity=0.209 Sum_probs=108.1
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccccCC
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 196 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 196 (346)
.+++++|+|+.+++++++++++.+|++.|.+++++++||++ + |+++|++|.+|++ +.+..+. ....+++++|. ++
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~-~~~~~v~~~m~-~~ 79 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLL-PLILKAD-GDSDDVKKLLR-PA 79 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGGSSS-GGGCCGGGTCB-CC
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHhcc-CCCcCHHHHcC-CC
Confidence 46889998766889999999999999999999999999999 5 7999999999997 5444222 23678999995 59
Q ss_pred eeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccCCC
Q 019128 197 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTA 250 (346)
Q Consensus 197 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~~~ 250 (346)
.++++++++.++++.|.+++++++||+|++|+++|+||..|+++++++++.++.
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~de~ 133 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDEH 133 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--------
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCcCcc
Confidence 999999999999999999999999999999999999999999999888776554
No 18
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.86 E-value=2.7e-21 Score=154.95 Aligned_cols=126 Identities=18% Similarity=0.211 Sum_probs=113.7
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 193 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 193 (346)
+...+++++|+++.+++++++++++.++++.|.+++++++||++ + |+++|++|.+|++..+.... ..++.++|
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m- 94 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----KIELEEIL- 94 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----CCCGGGTC-
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC----CccHHHhc-
Confidence 45678999999767899999999999999999999999999999 4 89999999999984433322 46899999
Q ss_pred cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 194 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 194 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
+++.++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++++++
T Consensus 95 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~i 147 (148)
T 3lv9_A 95 RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI 147 (148)
T ss_dssp BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHTC
T ss_pred CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCcC
Confidence 89999999999999999999999999999999999999999999999988865
No 19
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.86 E-value=1.6e-21 Score=152.79 Aligned_cols=124 Identities=15% Similarity=0.181 Sum_probs=109.4
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCcccccccccccc
Q 019128 117 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 194 (346)
Q Consensus 117 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~ 194 (346)
...+++++|+++..++++++++++.+|++.|.+++++++||++ + |+++|++|.+|++ +....+.. ..++.++| +
T Consensus 4 ~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~~~~--~~~v~~~m-~ 79 (130)
T 3i8n_A 4 QDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELF-KMQQSGSG--QKQLGAVM-R 79 (130)
T ss_dssp ---CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHH-HHHHTTTT--TSBHHHHS-E
T ss_pred CcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHH-HHHhcCCC--cCCHHHHh-c
Confidence 3467999999867788999999999999999999999999999 5 8999999999998 55444332 56899999 5
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 195 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 195 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
++.++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++++
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 78999999999999999999999999999999999999999999998765
No 20
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.86 E-value=2e-21 Score=152.05 Aligned_cols=123 Identities=15% Similarity=0.184 Sum_probs=109.4
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccccC
Q 019128 118 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 195 (346)
Q Consensus 118 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~ 195 (346)
..+++++|+|+.+++++++++++.+|++.|.+++++++||++ + |+++|++|.+|++ +.... ...+++++| ++
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~----~~~~v~~~m-~~ 77 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLL-RYMLE----PALDIRSLV-RP 77 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGG-GGGTC----TTSCGGGGC-BC
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHH-hHhcc----CCcCHHHHh-CC
Confidence 456899999767889999999999999999999999999999 4 8999999999997 44332 256899999 46
Q ss_pred CeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 196 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 196 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
+.++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++++++
T Consensus 78 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~gei 128 (129)
T 3jtf_A 78 AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGDI 128 (129)
T ss_dssp CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHTC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 899999999999999999999999999999999999999999999988865
No 21
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.85 E-value=3.7e-21 Score=155.10 Aligned_cols=130 Identities=14% Similarity=0.139 Sum_probs=111.0
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEE-e--CCEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 019128 117 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-V--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 193 (346)
Q Consensus 117 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~-d--~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 193 (346)
...+++++|+++.+++++++++++.+|++.|.+++++++||+ + +|+++|+||.+|+++.+... . ..++.++|
T Consensus 18 ~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~-~---~~~v~~~m- 92 (153)
T 3oco_A 18 NDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID-D---KAKISTIM- 92 (153)
T ss_dssp HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH-T---TSBGGGTC-
T ss_pred CCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC-C---CCcHHHHh-
Confidence 346799999876689999999999999999999999999999 5 48999999999998443332 2 56899999
Q ss_pred cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccCCCC
Q 019128 194 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAG 251 (346)
Q Consensus 194 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~~~~ 251 (346)
+++.++++++++.++++.|.+++++++||+|++|+++|+||..|+++++++.+.++.+
T Consensus 93 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~de~~ 150 (153)
T 3oco_A 93 RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRDEQD 150 (153)
T ss_dssp BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-------
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCCccc
Confidence 9999999999999999999999999999999999999999999999999988866543
No 22
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.85 E-value=7.7e-21 Score=156.36 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=115.1
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 193 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 193 (346)
+...+++++|+|+.+++++++++++.++++.|.+++++++||++ + ++++|+||.+|++....... ..++. |.
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~----~~~v~--~~ 106 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG----RVRRN--RL 106 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----SCCGG--GS
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC----cchhH--hc
Confidence 45678999999767899999999999999999999999999998 4 79999999999984433321 35677 45
Q ss_pred cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccCCCCC
Q 019128 194 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGS 252 (346)
Q Consensus 194 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~~~~~ 252 (346)
++++++++++++.++++.|.+++++.+||+|++|+++|+||..||++++++.+.++.+.
T Consensus 107 ~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~~~ 165 (173)
T 3ocm_A 107 RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDEL 165 (173)
T ss_dssp BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTTSC
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCcccc
Confidence 88999999999999999999999999999999999999999999999999988776543
No 23
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.85 E-value=7.6e-21 Score=165.46 Aligned_cols=219 Identities=17% Similarity=0.213 Sum_probs=142.2
Q ss_pred CcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHH--HhhhhhHhhhhh
Q 019128 16 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERA--AEKGKAIAAAVE 92 (346)
Q Consensus 16 ~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~--~~~~~~~~~~~~ 92 (346)
...+|+|+|+++++++++++++.+|+++|.+++++++||+| +|+++|++|..|+++.+....... ......+.....
T Consensus 5 ~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~ 84 (245)
T 3l2b_A 5 VKLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILD 84 (245)
T ss_dssp CCCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHH
T ss_pred ccCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHH
Confidence 46899999999999999999999999999999999999999 699999999999988754211000 000000000000
Q ss_pred hhhhccCCCCCChhhHHHHH-HHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCC----------
Q 019128 93 GVEKHWGTSISGPNTFIETL-RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN---------- 161 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~-~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~---------- 161 (346)
.+...+-.+..........+ ...+....+.+.+.+ ..++.+.. -.++...+.+.+.++++++++.
T Consensus 85 ~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~-~~ivIvgd---r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a 160 (245)
T 3l2b_A 85 TLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISE-GDIAIAGD---RAEIQAELIELKVSLLIVTGGHTPSKEIIELA 160 (245)
T ss_dssp HTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCT-TCEEEECS---CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHH
T ss_pred HhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCC-CCEEEECC---CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHH
Confidence 00000000000000000000 000011122333443 34444533 3688888899999999888522
Q ss_pred ---EEEEEeeHHHHHHHHHhcCCCccccccccccc-cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHH
Q 019128 162 ---KPRGILTSKDILMRVISQNLPADSTLVEKVMT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIH 237 (346)
Q Consensus 162 ---~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~D 237 (346)
.+..+.|..|.+ ...... ....+++++|+ +++.++++++++.++++.|.+++++++||+|++|+++|+||.+|
T Consensus 161 ~~~~~~~i~t~~d~~-~~~~~~--~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~d 237 (245)
T 3l2b_A 161 KKNNITVITTPHDSF-TASRLI--VQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFH 237 (245)
T ss_dssp HHHTCEEEECSSCHH-HHHHHG--GGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-
T ss_pred HHcCCeEEEeCCChH-HHHHHH--hcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHH
Confidence 245677777775 222211 12568999999 89999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 019128 238 ITHA 241 (346)
Q Consensus 238 i~~~ 241 (346)
++++
T Consensus 238 ll~~ 241 (245)
T 3l2b_A 238 LIST 241 (245)
T ss_dssp ----
T ss_pred hhch
Confidence 9975
No 24
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.84 E-value=3.2e-21 Score=150.40 Aligned_cols=122 Identities=19% Similarity=0.267 Sum_probs=106.6
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccccCC
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 196 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 196 (346)
.+++++|.+..+++++++++++.+|++.|.+++++++||++ + |+++|++|.+|++ +.+.... ...+++++| +++
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~--~~~~v~~~m-~~~ 78 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLL-PFMRSDA--EAFSMDKVL-RTA 78 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGSTTC--CCCCHHHHC-BCC
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHhccC--CCCCHHHHc-CCC
Confidence 46789998755689999999999999999999999999999 5 7999999999997 4443322 256899999 558
Q ss_pred eeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 197 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 197 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
.++++++++.++++.|.+++++++||+|++|+++|+||..|+++++++
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 899999999999999999999999999999999999999999998654
No 25
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.83 E-value=6.9e-21 Score=156.29 Aligned_cols=127 Identities=24% Similarity=0.258 Sum_probs=109.0
Q ss_pred HHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC----------
Q 019128 113 RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL---------- 181 (346)
Q Consensus 113 ~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~---------- 181 (346)
...+...+++++|++ +++++.+++++.+|++.|.+++++++||+| +|+++|+||.+|++ +......
T Consensus 12 ~~~l~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll-~~~~~~~~~~~~~~~~~ 88 (170)
T 4esy_A 12 ARAIRQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFL-RGSIPFWIYEASEILSR 88 (170)
T ss_dssp HHHHHTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGG-GGTCCTTHHHHHHHHTT
T ss_pred HHHHcCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHH-HHHhhccccchhhhhhh
Confidence 344556789999985 899999999999999999999999999999 89999999999997 2211100
Q ss_pred ------------CccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHH
Q 019128 182 ------------PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 243 (346)
Q Consensus 182 ------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~ 243 (346)
.....+++++|+++++++++++++.+|++.|.+++++++||+| +|+++|+||..||+++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 89 AIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp TSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSC
T ss_pred ccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 0114578999999999999999999999999999999999998 699999999999998753
No 26
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.83 E-value=1.2e-19 Score=142.53 Aligned_cols=125 Identities=28% Similarity=0.413 Sum_probs=112.1
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCe
Q 019128 118 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 197 (346)
Q Consensus 118 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 197 (346)
..+++++|.+ ++.++++++++.++++.|.+++++++||+++|+++|++|.+|++ +++..+... ..++.++|.+++.
T Consensus 3 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~~~~~~~ 78 (133)
T 2ef7_A 3 EEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIV-KAIGKGKSL-ETKAEEFMTASLI 78 (133)
T ss_dssp CCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHHTTCCT-TCBGGGTSEECCC
T ss_pred cccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHH-HHHhcCCCc-ccCHHHHcCCCCE
Confidence 4578999985 68899999999999999999999999999989999999999997 555544332 5789999999999
Q ss_pred eecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 198 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 198 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
++++++++.++++.|.+++.+++||+|++|+++|+||..|++++....+
T Consensus 79 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~ 127 (133)
T 2ef7_A 79 TIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMF 127 (133)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999866554
No 27
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.82 E-value=1.8e-19 Score=144.34 Aligned_cols=128 Identities=19% Similarity=0.318 Sum_probs=108.4
Q ss_pred HHHhhcCCCCcccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHh
Q 019128 7 RVIARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAE 82 (346)
Q Consensus 7 ~~~~~~~~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~ 82 (346)
+++.....+...+|+++|++ +++++++++|+.+|++.|.+++++++||+| + |+++|+||.+|+++.....
T Consensus 12 ~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~------ 85 (148)
T 3lv9_A 12 RLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINE------ 85 (148)
T ss_dssp ------CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHH------
T ss_pred HHHHHHhccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcC------
Confidence 34555668899999999998 999999999999999999999999999999 5 8999999999998753210
Q ss_pred hhhhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CC
Q 019128 83 KGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN 161 (346)
Q Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~ 161 (346)
...+++++|. +++++++++++.++++.|.+++.+.+||+| +|
T Consensus 86 ----------------------------------~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g 128 (148)
T 3lv9_A 86 ----------------------------------NKIELEEILR---DIIYISENLTIDKALERIRKEKLQLAIVVDEYG 128 (148)
T ss_dssp ----------------------------------SCCCGGGTCB---CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred ----------------------------------CCccHHHhcC---CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCC
Confidence 1456889993 588999999999999999999999999999 69
Q ss_pred EEEEEeeHHHHHHHHH
Q 019128 162 KPRGILTSKDILMRVI 177 (346)
Q Consensus 162 ~~~Giit~~dll~~~~ 177 (346)
+++|+||..|+++.+.
T Consensus 129 ~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 129 GTSGVVTIEDILEEIV 144 (148)
T ss_dssp SEEEEEEHHHHHHHHH
T ss_pred CEEEEEEHHHHHHHHh
Confidence 9999999999995544
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.82 E-value=6.3e-20 Score=143.19 Aligned_cols=122 Identities=13% Similarity=0.077 Sum_probs=108.8
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCe
Q 019128 118 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 197 (346)
Q Consensus 118 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 197 (346)
..+++++|.+ ++.++++++++.+|++.|.+++++++||+++|+++|++|.+|++ +....+.. ...+++++|.+++.
T Consensus 4 s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~-~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 4 SVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLL-EGRKGWPT-VKEKLGEELLETVR 79 (128)
T ss_dssp TCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-TTCSSSCC-TTCBCCGGGCBCCC
T ss_pred ceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHH-HHHhhCCc-ccCcHHHHccCCCc
Confidence 4568999985 68899999999999999999999999999999999999999997 54443322 13679999999999
Q ss_pred eecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHH
Q 019128 198 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 243 (346)
Q Consensus 198 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~ 243 (346)
++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++.
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998754
No 29
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.82 E-value=8.9e-20 Score=147.38 Aligned_cols=131 Identities=19% Similarity=0.251 Sum_probs=112.7
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCc---cccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPA---DSTLVEKV 191 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~---~~~~v~~~ 191 (346)
+...+++++|+|..+++++++++++.+|++.|.+++++++||+| +|+++|++|.+|++..+....... ...++.++
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~ 91 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHM 91 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGG
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHh
Confidence 34467999999877899999999999999999999999999999 899999999999984443322110 15689999
Q ss_pred cccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccC
Q 019128 192 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 248 (346)
Q Consensus 192 m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~ 248 (346)
|.+++.++++++++.++++.|.+++ ++||+|++|+++|+||..|+++++...+..
T Consensus 92 m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 92 TKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp CBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC
T ss_pred ccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 9999999999999999999999886 699999999999999999999998777754
No 30
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.82 E-value=8.5e-20 Score=143.76 Aligned_cols=124 Identities=27% Similarity=0.464 Sum_probs=109.6
Q ss_pred CccccccCC-CceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCee
Q 019128 120 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 198 (346)
Q Consensus 120 ~v~~im~~~-~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~ 198 (346)
+++++|.|+ ++++++++++++.++++.|.+++++++||+++|+++|++|.+|+++.+...+......++.++|.+++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~ 86 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAY 86 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeE
Confidence 577888733 4789999999999999999999999999999899999999999974455544334467899999999999
Q ss_pred ecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 199 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 199 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
+++++++.++++.|.+++.+++||+| +|+++|+||..|+++++..
T Consensus 87 v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 87 VDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp BCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999 7999999999999987543
No 31
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.82 E-value=3.9e-19 Score=144.11 Aligned_cols=133 Identities=20% Similarity=0.215 Sum_probs=116.0
Q ss_pred HHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccc
Q 019128 111 TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVE 189 (346)
Q Consensus 111 ~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~ 189 (346)
.+...+...+++++|.+ ++++.+++++.+|++.|.+++++++||++ +|+++|+||.+|++ +.+..+......++.
T Consensus 9 ~l~~~l~~~~v~~im~~---~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~ 84 (159)
T 3fv6_A 9 LLADKLKKLQVKDFQSI---PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLL-RASIGQQELTSVPVH 84 (159)
T ss_dssp HHHHHHTTCBGGGSCBC---CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHH-HHHTSCSCTTTCBGG
T ss_pred HHHHHHhhCCHHHHcCC---CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHH-HHhhccCcccCcCHH
Confidence 34556667789999984 55999999999999999999999999999 89999999999998 544433333467899
Q ss_pred ccccc--CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCC---cEEEEEehHHHHHHHHHHcc
Q 019128 190 KVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHITHAAVATVG 247 (346)
Q Consensus 190 ~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g---~~~Giit~~Di~~~~~~~i~ 247 (346)
++|.+ ++.++++++++.++++.|.+++++++||+|++| +++|+||..||++++.....
T Consensus 85 ~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~ 147 (159)
T 3fv6_A 85 IIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSE 147 (159)
T ss_dssp GTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHT
T ss_pred HHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhh
Confidence 99998 899999999999999999999999999999888 99999999999998765543
No 32
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.81 E-value=2e-19 Score=139.54 Aligned_cols=120 Identities=22% Similarity=0.231 Sum_probs=107.5
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCeee
Q 019128 120 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 199 (346)
Q Consensus 120 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 199 (346)
+++++|.+ +++++++++++.++++.|.+++.+++||+|+|+++|++|.+|++ +++..+......++.++|.+++.++
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~-~~~~~~~~~~~~~v~~~m~~~~~~v 78 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVL-EAIAEGDDLAEVKVWEVMERDLVTI 78 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHH-HHHHHTCCTTTSBHHHHCBCGGGEE
T ss_pred CHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHH-HHHhcCCcccccCHHHHcCCCCeEE
Confidence 46778874 78899999999999999999999999999999999999999998 5555444434678999999999999
Q ss_pred cCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHH
Q 019128 200 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 243 (346)
Q Consensus 200 ~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~ 243 (346)
++++++.++++.|.+++.+++||+|+ |+++|+||..|+++++.
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 79 SPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 99999999999999999999999998 99999999999998743
No 33
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.81 E-value=2.8e-19 Score=141.33 Aligned_cols=128 Identities=24% Similarity=0.455 Sum_probs=112.9
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccC
Q 019128 117 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 195 (346)
Q Consensus 117 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~ 195 (346)
...+++++|.+ +++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++++++..+. ....++.++|.++
T Consensus 5 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~~ 81 (138)
T 2yzi_A 5 MKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-PYDIPVERIMTRN 81 (138)
T ss_dssp TTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-CTTSBGGGTCBCS
T ss_pred hhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-cccCCHHHHhhCC
Confidence 34578999974 789999999999999999999999999999 8999999999999745554433 2367899999999
Q ss_pred CeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccC
Q 019128 196 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 248 (346)
Q Consensus 196 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~ 248 (346)
+.++++++++.++++.|.+++.+++ |+|++|+++|+||..|+++++...++.
T Consensus 82 ~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~~ 133 (138)
T 2yzi_A 82 LITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLET 133 (138)
T ss_dssp CCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSCC
T ss_pred CeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 999899999999999999987765543
No 34
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.81 E-value=2.2e-19 Score=138.76 Aligned_cols=116 Identities=25% Similarity=0.310 Sum_probs=105.6
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCee
Q 019128 120 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 198 (346)
Q Consensus 120 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~ 198 (346)
+++++|.+ +++++++++++.++++.|.+++.+++||++ +|+++|++|.+|++ +.+..+ ..++.++|.+++.+
T Consensus 2 ~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~----~~~v~~~~~~~~~~ 74 (122)
T 3kpb_A 2 LVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIA-KALAQN----KKTIEEIMTRNVIT 74 (122)
T ss_dssp BHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHH-HHHHTT----CCBGGGTSBSSCCC
T ss_pred chHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHH-HHHHhc----ccCHHHHhcCCCeE
Confidence 46788875 788999999999999999999999999999 89999999999998 554443 34899999999999
Q ss_pred ecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 199 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 199 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
+++++++.++++.|.+++.+++||+|++|+++|+||..|+++++
T Consensus 75 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 75 AHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHh
Confidence 99999999999999999999999999999999999999999874
No 35
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.81 E-value=3.9e-19 Score=141.08 Aligned_cols=119 Identities=22% Similarity=0.362 Sum_probs=107.0
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CC--EEEEEeeHHHHHHHHHhcCCCccccccccccccC
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN--KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 195 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~--~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~ 195 (346)
.+++++|.+ ++.++++++++.++++.|.+++++++||++ ++ +++|++|.+|++ +.+..+... ..++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDIL-RAVAQRLDL-DGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHH-HHHHTTCCT-TSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHH-HHHhcCCCC-CCCHHHHcCCC
Confidence 468899984 789999999999999999999999999999 56 899999999998 555444332 57899999999
Q ss_pred CeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 196 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 196 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
+.+++++ ++.++++.|.+++.+++||+|++|+++|+||..|++++.
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 9999999 999999999999999999999999999999999999764
No 36
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.81 E-value=1.5e-19 Score=145.02 Aligned_cols=129 Identities=18% Similarity=0.166 Sum_probs=111.8
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC-----Cccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVE 189 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~-----~~~~~~v~ 189 (346)
+...+++++|.+..+++++++++++.+|++.|.+++++++||+| +|+++|+||.+|++ +.+.... .....++.
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v~ 90 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMIL-DGILGLERIEFERLEEMKVE 90 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHTBCSSSBCGGGGGGCBGG
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHH-HHHHhhcccchhHHhcCCHH
Confidence 33467899998655789999999999999999999999999999 89999999999998 5543211 11357899
Q ss_pred cccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHcc
Q 019128 190 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 247 (346)
Q Consensus 190 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~ 247 (346)
++|.+++.++++++++.++++.|.++++ +||+|++|+++|+||..|+++++...+.
T Consensus 91 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 91 QVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp GTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred HHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhH
Confidence 9999999999999999999999999987 9999999999999999999998777664
No 37
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.81 E-value=3.1e-19 Score=146.71 Aligned_cols=128 Identities=15% Similarity=0.235 Sum_probs=103.4
Q ss_pred HHhhcCCCCccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhh
Q 019128 8 VIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEK 83 (346)
Q Consensus 8 ~~~~~~~~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~ 83 (346)
++.+...+...+|+++|+ ++++++++++|+.+|++.|.+++++++||+| + |+++|+||.+|+++....
T Consensus 32 ~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~-------- 103 (172)
T 3lhh_A 32 MVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIA-------- 103 (172)
T ss_dssp -----------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHT--------
T ss_pred HHHHHhccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhh--------
Confidence 344555888999999999 7889999999999999999999999999999 5 899999999999875210
Q ss_pred hhhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCE
Q 019128 84 GKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK 162 (346)
Q Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~ 162 (346)
-...+++++|. +++++++++++.++++.|.+++.+.+||+| +|+
T Consensus 104 --------------------------------~~~~~v~~im~---~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~ 148 (172)
T 3lhh_A 104 --------------------------------GERLELVDLVK---NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGD 148 (172)
T ss_dssp --------------------------------TCCCCGGGGCB---CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred --------------------------------cCcccHHHHhc---CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 01456899993 689999999999999999999999999999 699
Q ss_pred EEEEeeHHHHHHHHHh
Q 019128 163 PRGILTSKDILMRVIS 178 (346)
Q Consensus 163 ~~Giit~~dll~~~~~ 178 (346)
++|+||..|+++.+..
T Consensus 149 lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 149 LKGLVTLQDMMDALTG 164 (172)
T ss_dssp EEEEEEHHHHHHHHHT
T ss_pred EEEEeeHHHHHHHHhC
Confidence 9999999999955443
No 38
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=8.2e-20 Score=149.08 Aligned_cols=130 Identities=22% Similarity=0.347 Sum_probs=112.4
Q ss_pred hCCCCccccccCC-CceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 019128 116 MFRPSLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT 193 (346)
Q Consensus 116 ~~~~~v~~im~~~-~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 193 (346)
+...+++++|.+. .+++++++++++.+|++.|.+++++++||+| +|+++|+||.+|+++.+..........++.++|.
T Consensus 21 l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 100 (165)
T 3fhm_A 21 GMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMT 100 (165)
T ss_dssp SSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTSB
T ss_pred hhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHHhc
Confidence 4556789999852 3689999999999999999999999999999 8899999999999844443321233678999999
Q ss_pred cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 194 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 194 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
+++.++++++++.++++.|.+++++++||+|+ |+++|+||..||++++....
T Consensus 101 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~ 152 (165)
T 3fhm_A 101 KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEI 152 (165)
T ss_dssp SSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC-
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 99999999999999865444
No 39
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.81 E-value=1.4e-19 Score=146.45 Aligned_cols=129 Identities=22% Similarity=0.371 Sum_probs=112.7
Q ss_pred CCccccccCC----CceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCcccccccccccc
Q 019128 119 PSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 194 (346)
Q Consensus 119 ~~v~~im~~~----~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~ 194 (346)
.+++++|.+. ++++++++++++.+|++.|.+++++++||.++|+++|++|.+|+++.+..........++.++|.+
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~ 86 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEEIMTA 86 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCC
Confidence 3588888864 567999999999999999999999999997799999999999998444444433346789999999
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccC
Q 019128 195 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 248 (346)
Q Consensus 195 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~ 248 (346)
++.++++++++.++++.|.+++++++||+| +|+++|+||..||++++......
T Consensus 87 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~~ 139 (157)
T 4fry_A 87 KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQF 139 (157)
T ss_dssp SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCC
T ss_pred CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 79999999999999997766543
No 40
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.80 E-value=2e-19 Score=144.22 Aligned_cols=121 Identities=20% Similarity=0.231 Sum_probs=109.6
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCC
Q 019128 118 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 196 (346)
Q Consensus 118 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 196 (346)
..+++++|.+..+++++++++++.++++.|.+++++++||++ +|+++|+||.+|++ +.+..+......++.++|.+++
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLR-RVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHH-HHHCSSSCCTTCBHHHHSEESC
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHH-HHHhcCCCcccCcHHHHcCCCC
Confidence 357999998545799999999999999999999999999999 89999999999998 6666555444678999999999
Q ss_pred eeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHH
Q 019128 197 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 240 (346)
Q Consensus 197 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~ 240 (346)
.++++++++.++++.|.+++++++||+|++ +++|+||..||++
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 999999999999999999999999999965 9999999999975
No 41
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.80 E-value=4.4e-19 Score=140.09 Aligned_cols=125 Identities=27% Similarity=0.363 Sum_probs=109.9
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHH-HHHHHhcCCCccccccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI-LMRVISQNLPADSTLVEKVMT 193 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dl-l~~~~~~~~~~~~~~v~~~m~ 193 (346)
+...+++++|.+ ++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|+ + +++..+.. ...++.++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~-~~~~~~~~-~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGY-NLIRDKYT-LETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHH-HHTTTCCC-SSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHH-HHHhhccc-CCcCHHHHhC
Confidence 445678999974 788899999999999999999999999999 7999999999999 7 55443322 2678999999
Q ss_pred cCCeeecCCCCHHHHHHHhHhCC-----CceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 194 PNPECATIDTPIVDALHIMHDGK-----FLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 194 ~~~~~v~~~~~l~~~~~~m~~~~-----~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
+++.++++++++.++++.|.+++ .+++||+|++|+++|+||..|+++++..
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999 9999999999999999999999987554
No 42
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.80 E-value=6.3e-20 Score=148.35 Aligned_cols=119 Identities=14% Similarity=0.192 Sum_probs=106.6
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C-CEEEEEeeHHHHHHHHHhcCCCccccccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 193 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 193 (346)
+...+++++|+++.+++++++++++.++++.|.+++++++||++ + ++++|++|.+|++ +....+ ...++.++|.
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~---~~~~v~~im~ 110 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLL-KYMFNP---EQFHLKSILR 110 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGSSCG---GGCCHHHHCB
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHcC---CcccHHHHcC
Confidence 45678999999766899999999999999999999999999999 5 5999999999997 443332 3578999995
Q ss_pred cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHH
Q 019128 194 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 239 (346)
Q Consensus 194 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~ 239 (346)
++.++++++++.++++.|.+++.+++||+|++|+++|+||..|++
T Consensus 111 -~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 111 -PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp -CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred -CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 589999999999999999999999999999999999999999986
No 43
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.80 E-value=2e-19 Score=152.97 Aligned_cols=163 Identities=15% Similarity=0.098 Sum_probs=104.0
Q ss_pred CCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhh
Q 019128 15 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 93 (346)
Q Consensus 15 ~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
....+++++|.++++++++++|+.+|+++|.+++++++||+| +|+++|+||.+|+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~--------------------- 68 (213)
T 1vr9_A 10 HHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDL--------------------- 68 (213)
T ss_dssp ---CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTS---------------------
T ss_pred ccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhh---------------------
Confidence 345789999999999999999999999999999999999999 7999999999998542
Q ss_pred hhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHH
Q 019128 94 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 172 (346)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dl 172 (346)
....+++++|.+ +++++++++++.++++.|.+++++++||+| +|+++|++|.+|+
T Consensus 69 ----------------------~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Di 124 (213)
T 1vr9_A 69 ----------------------DLDSSVFNKVSL--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDF 124 (213)
T ss_dssp ----------------------CTTSBSGGGCBC--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHH
T ss_pred ----------------------cCCCcHHHHccC--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHH
Confidence 112468899985 788999999999999999999999999999 6999999999999
Q ss_pred HHHHHhcCCCccccccccccccCC-eeecCCCCHHHHHHHhHhCCCceeEEEcCCCc
Q 019128 173 LMRVISQNLPADSTLVEKVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 228 (346)
Q Consensus 173 l~~~~~~~~~~~~~~v~~~m~~~~-~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~ 228 (346)
+ +.+.... ...+.+.+-. .+.....++.++.+.|.+++.+.++|++.+|.
T Consensus 125 l-~~~~~~~-----~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 125 L-EALIEAL-----AMDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp H-HHHHHSC-----C------------------------------------------
T ss_pred H-HHHHHHh-----cCCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 8 4443322 1222332211 11133345999999999999999999876654
No 44
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.80 E-value=3.2e-19 Score=139.57 Aligned_cols=122 Identities=19% Similarity=0.203 Sum_probs=100.8
Q ss_pred CCCccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhh
Q 019128 14 NLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAA 89 (346)
Q Consensus 14 ~~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~ 89 (346)
++.+.+|+++|+ .+++++++++++.+|++.|.+++++++||+| + |+++|+||.+|+++....
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-------------- 67 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQS-------------- 67 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHT--------------
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhc--------------
Confidence 467899999999 4567899999999999999999999999998 5 899999999999875311
Q ss_pred hhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEee
Q 019128 90 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 168 (346)
Q Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit 168 (346)
.....+++++|. +++++++++++.++++.|.+++.+.+||+| +|+++|++|
T Consensus 68 -------------------------~~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt 119 (130)
T 3i8n_A 68 -------------------------GSGQKQLGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVT 119 (130)
T ss_dssp -------------------------TTTTSBHHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEE
T ss_pred -------------------------CCCcCCHHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEE
Confidence 012345777885 478999999999999999999999999999 799999999
Q ss_pred HHHHHHHHH
Q 019128 169 SKDILMRVI 177 (346)
Q Consensus 169 ~~dll~~~~ 177 (346)
..|+++.+.
T Consensus 120 ~~dil~~l~ 128 (130)
T 3i8n_A 120 LEDIFEHLV 128 (130)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999985443
No 45
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.80 E-value=2.3e-19 Score=143.94 Aligned_cols=127 Identities=28% Similarity=0.398 Sum_probs=108.3
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcC-------------CCcc
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-------------LPAD 184 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~-------------~~~~ 184 (346)
.+++++|.+..+++++++++++.++++.|.+++++++||++ +++++|++|.+|++ ++.... ....
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLL-ALDSGDSTWKTFNAVQKLLSKTN 83 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHT-TCC----CCHHHHHHHTC-----
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHH-HhhcccCcccchHHHHHHHHHhc
Confidence 46899998755799999999999999999999999999999 78999999999996 321100 1112
Q ss_pred ccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 185 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 185 ~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
..++.++|.++++++++++++.++++.|.+++.+++||+|++|+++|+||..||++++....
T Consensus 84 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 84 GKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIK 145 (152)
T ss_dssp CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC--
T ss_pred cccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhcc
Confidence 46899999999999999999999999999999999999999999999999999999876543
No 46
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=8.5e-19 Score=143.03 Aligned_cols=131 Identities=17% Similarity=0.149 Sum_probs=112.0
Q ss_pred hhcCCCCcccccccccC---CCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhh
Q 019128 10 ARELNLEETPVSKVMTR---NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGK 85 (346)
Q Consensus 10 ~~~~~~~~~~v~dim~~---~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~ 85 (346)
.....+..++|+++|.+ +++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++.+....
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-------- 87 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG-------- 87 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG--------
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC--------
Confidence 34457788999999995 799999999999999999999999999999 799999999999987643210
Q ss_pred hHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEE
Q 019128 86 AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 165 (346)
Q Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~G 165 (346)
......++.++|.+ +++++.+++++.++++.|.+++++++||+++|+++|
T Consensus 88 ----------------------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~G 137 (165)
T 3fhm_A 88 ----------------------------AASLQQSVSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAG 137 (165)
T ss_dssp ----------------------------GGGGTSBGGGTSBS--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEE
T ss_pred ----------------------------CccccCCHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEE
Confidence 01234568899974 788999999999999999999999999999999999
Q ss_pred EeeHHHHHHHHHhc
Q 019128 166 ILTSKDILMRVISQ 179 (346)
Q Consensus 166 iit~~dll~~~~~~ 179 (346)
+||..|++ +.+..
T Consensus 138 iit~~dil-~~~~~ 150 (165)
T 3fhm_A 138 IISIGDVV-KARIG 150 (165)
T ss_dssp EEEHHHHH-HHTTC
T ss_pred EEEHHHHH-HHHHH
Confidence 99999998 55443
No 47
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.79 E-value=1.2e-18 Score=140.77 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=111.5
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC-----Cccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVE 189 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~-----~~~~~~v~ 189 (346)
+...+++++|.+..+++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +....+. .....++.
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v~ 86 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMM-DAILGLERIEFERLETMKVE 86 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHH-HHSBCSSSBCGGGGGTCBGG
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHH-HHHhcccccchHHhcCCcHH
Confidence 34567999998545788999999999999999999999999999 79999999999997 5543311 11256899
Q ss_pred cccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHccC
Q 019128 190 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 248 (346)
Q Consensus 190 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~~ 248 (346)
++|.+++.++++++++.++++.|.++++ +||+|++|+++|+||..|+++++......
T Consensus 87 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~~ 143 (157)
T 2emq_A 87 EVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLHR 143 (157)
T ss_dssp GTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTCC
T ss_pred HHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhhc
Confidence 9999999999999999999999999987 99999999999999999999987766543
No 48
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.79 E-value=6.5e-19 Score=145.59 Aligned_cols=129 Identities=21% Similarity=0.316 Sum_probs=109.8
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcC-----------------
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN----------------- 180 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~----------------- 180 (346)
.+++++|.+..+++++.+++++.+|++.|.+++++++||++ +++++|+||.+|+++.....+
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 83 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhh
Confidence 35788898655799999999999999999999999999999 899999999999972111000
Q ss_pred ---------CCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHcc
Q 019128 181 ---------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 247 (346)
Q Consensus 181 ---------~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~ 247 (346)
......+++++|.+++.++++++++.++++.|.+++++++||+|++|+++|+||..||++++.....
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~ 159 (180)
T 3sl7_A 84 TFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKR 159 (180)
T ss_dssp SHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHhh
Confidence 0112568999999999999999999999999999999999999999999999999999998766553
No 49
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.79 E-value=1.9e-19 Score=141.29 Aligned_cols=120 Identities=17% Similarity=0.323 Sum_probs=107.0
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCe
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 197 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 197 (346)
.+++++|.+ +++++++++++.++++.|.+++++++||+| +|+++|++|.+|++.+++..+......++.++|.+++.
T Consensus 8 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 85 (133)
T 1y5h_A 8 TTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIY 85 (133)
T ss_dssp CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCC
T ss_pred cCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCE
Confidence 467888874 688899999999999999999999999997 89999999999997445554443345789999999999
Q ss_pred eecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHH
Q 019128 198 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 241 (346)
Q Consensus 198 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~ 241 (346)
++++++++.++++.|.+++.+++||+|+ |+++|+||..|++++
T Consensus 86 ~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~ 128 (133)
T 1y5h_A 86 YVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARH 128 (133)
T ss_dssp CEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHT
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 9999999999999999999999999997 999999999999985
No 50
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.79 E-value=2.1e-18 Score=139.50 Aligned_cols=124 Identities=21% Similarity=0.295 Sum_probs=106.8
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCcE-EEEEeCCEEEEEeeHHHHHHHHHhc--------------CCCcc
Q 019128 120 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQ--------------NLPAD 184 (346)
Q Consensus 120 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~-l~V~d~~~~~Giit~~dll~~~~~~--------------~~~~~ 184 (346)
+++++|.+ +++++++++++.+|++.|.++++++ +||+|+++++|++|.+|++..+... .....
T Consensus 17 ~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (157)
T 1o50_A 17 DVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLI 94 (157)
T ss_dssp HHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCS
T ss_pred cHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHc
Confidence 47788874 7999999999999999999999999 9999944999999999998433210 01223
Q ss_pred ccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 185 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 185 ~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
..++.++|.+ ++++++++++.++++.|.+++++++||+|++|+++|+||..|+++++...+
T Consensus 95 ~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 95 AKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp SCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred CCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 5789999988 999999999999999999999999999999999999999999999866543
No 51
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.79 E-value=5.9e-19 Score=142.13 Aligned_cols=130 Identities=20% Similarity=0.282 Sum_probs=110.4
Q ss_pred CcchhHHHHhhcCCCCcccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeee-e--CCeEEEEEehHHHHHHHHH
Q 019128 1 MKDIATRVIARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVV-E--NGEVIALLDIAKCLYDAIA 75 (346)
Q Consensus 1 ~~d~~~~~~~~~~~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVv-d--~~~~vGivt~~dll~~~~~ 75 (346)
|++++++++ .+...+|+++|++ +++++++++|+.+|++.|.+++++++||+ + +|+++|+||.+|+++....
T Consensus 7 e~~~i~~~~----~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~ 82 (153)
T 3oco_A 7 DANFMQRAF----EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARI 82 (153)
T ss_dssp -CCHHHHHH----HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhc
Confidence 345555554 6778999999996 89999999999999999999999999999 5 3899999999999875321
Q ss_pred HHHHHHhhhhhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEE
Q 019128 76 RMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSA 155 (346)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l 155 (346)
. ...+++++|. +++++++++++.++++.|.+++.+.+
T Consensus 83 ~----------------------------------------~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~l 119 (153)
T 3oco_A 83 D----------------------------------------DKAKISTIMR---DIVSVPENMKVPDVMEEMSAHRVPMA 119 (153)
T ss_dssp H----------------------------------------TTSBGGGTCB---CCEEEETTSBHHHHHHHHHHTTCSCE
T ss_pred C----------------------------------------CCCcHHHHhC---CCeEECCCCCHHHHHHHHHHcCCcEE
Confidence 0 1356888993 68999999999999999999999999
Q ss_pred EEEe-CCEEEEEeeHHHHHHHHH
Q 019128 156 VVTV-ENKPRGILTSKDILMRVI 177 (346)
Q Consensus 156 ~V~d-~~~~~Giit~~dll~~~~ 177 (346)
||++ +|+++|+||..|+++.+.
T Consensus 120 pVvd~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 120 IVIDEYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp EEECTTSCEEEEECHHHHHHHHH
T ss_pred EEEeCCCCEEEEeeHHHHHHHHh
Confidence 9999 799999999999995444
No 52
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.78 E-value=1.4e-18 Score=141.07 Aligned_cols=126 Identities=19% Similarity=0.193 Sum_probs=108.1
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhc-------CCCccccccc
Q 019128 118 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQ-------NLPADSTLVE 189 (346)
Q Consensus 118 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~-------~~~~~~~~v~ 189 (346)
..+++++|.+ +++++++++++.+|++.|.+++++++||+| +|+++|+||.+|++..+... .......++.
T Consensus 4 ~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~ 81 (160)
T 2o16_A 4 MIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLF 81 (160)
T ss_dssp CCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHH
T ss_pred cCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHH
Confidence 3568899975 788999999999999999999999999999 79999999999998433321 1112357899
Q ss_pred cccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 190 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 190 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
++|.+++.++++++++.++++.|.+++.+++||+|+ |+++|+||..||++++...+
T Consensus 82 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 82 EVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp HHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998 99999999999999865543
No 53
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.78 E-value=1.8e-18 Score=133.57 Aligned_cols=117 Identities=22% Similarity=0.357 Sum_probs=103.7
Q ss_pred ccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhh
Q 019128 18 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 96 (346)
Q Consensus 18 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (346)
++|+++|.++++++++++++.+|++.|.+++++++||+| +|+++|+++..|+++....
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--------------------- 59 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--------------------- 59 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT---------------------
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh---------------------
Confidence 478999999999999999999999999999999999999 8999999999999775210
Q ss_pred ccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHH
Q 019128 97 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 175 (346)
Q Consensus 97 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~ 175 (346)
...+++++|.+ ++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|++ +
T Consensus 60 --------------------~~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~-~ 116 (122)
T 3kpb_A 60 --------------------NKKTIEEIMTR--NVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDIS-R 116 (122)
T ss_dssp --------------------TCCBGGGTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-H
T ss_pred --------------------cccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHH-H
Confidence 12368888874 788999999999999999999999999999 69999999999998 5
Q ss_pred HHh
Q 019128 176 VIS 178 (346)
Q Consensus 176 ~~~ 178 (346)
++.
T Consensus 117 ~l~ 119 (122)
T 3kpb_A 117 LFG 119 (122)
T ss_dssp HHC
T ss_pred Hhh
Confidence 543
No 54
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.78 E-value=4.4e-18 Score=143.64 Aligned_cols=122 Identities=16% Similarity=0.237 Sum_probs=109.8
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHc---CCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL---RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKV 191 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~---~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~ 191 (346)
+...+++++|++ ++++++++.++.+|++.|.+. +++.+||++ +|+++|++|.+|++ .. ....+++++
T Consensus 51 ~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~~------~~~~~v~~i 121 (205)
T 3kxr_A 51 YSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIF-KH------EPHEPLISL 121 (205)
T ss_dssp SCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHT-TS------CTTSBGGGG
T ss_pred CCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHH-hC------CCcchHHHH
Confidence 345689999985 899999999999999999997 789999999 89999999999997 21 125789999
Q ss_pred cccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 192 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 192 m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
|+++++++++++++.++++.|.+++++.+||||++|+++|+||..|+++.+..+.
T Consensus 122 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 122 LSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp CCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred hcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999865544
No 55
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.78 E-value=8.1e-19 Score=137.08 Aligned_cols=118 Identities=16% Similarity=0.237 Sum_probs=102.1
Q ss_pred Cccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhh
Q 019128 16 EETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 91 (346)
Q Consensus 16 ~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~ 91 (346)
.+.+|+++|+ ++++++++++++.+|++.|.+++++++||+| + |+++|+||.+|+++...
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~----------------- 65 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML----------------- 65 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT-----------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc-----------------
Confidence 5789999999 7789999999999999999999999999998 4 89999999999865310
Q ss_pred hhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHH
Q 019128 92 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 170 (346)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~ 170 (346)
....+++++|.+ ++++++++++.++++.|.+++.+.+||+| +|+++|++|..
T Consensus 66 ------------------------~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~ 118 (129)
T 3jtf_A 66 ------------------------EPALDIRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTME 118 (129)
T ss_dssp ------------------------CTTSCGGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHH
T ss_pred ------------------------cCCcCHHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 013468888863 78999999999999999999999999999 69999999999
Q ss_pred HHHHHHH
Q 019128 171 DILMRVI 177 (346)
Q Consensus 171 dll~~~~ 177 (346)
|+++.+.
T Consensus 119 Dil~~l~ 125 (129)
T 3jtf_A 119 DVLEQIV 125 (129)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9995544
No 56
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.78 E-value=2.6e-18 Score=134.75 Aligned_cols=121 Identities=15% Similarity=0.195 Sum_probs=105.5
Q ss_pred CcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhh
Q 019128 16 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 95 (346)
Q Consensus 16 ~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (346)
.+.+|+++|.++++++++++++.+|++.|.+++++++||+|+|+++|+++..|+++.....
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 62 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKG------------------- 62 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTT-------------------
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcC-------------------
Confidence 5789999999999999999999999999999999999999999999999999997642100
Q ss_pred hccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHH
Q 019128 96 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 174 (346)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~ 174 (346)
.....+++++|.+ ++.++++++++.++++.|.+++.+++||++ +|+++|+||..|++.
T Consensus 63 -------------------~~~~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~ 121 (133)
T 2ef7_A 63 -------------------KSLETKAEEFMTA--SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITR 121 (133)
T ss_dssp -------------------CCTTCBGGGTSEE--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred -------------------CCcccCHHHHcCC--CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHH
Confidence 0123568888874 688999999999999999999999999999 899999999999984
Q ss_pred HH
Q 019128 175 RV 176 (346)
Q Consensus 175 ~~ 176 (346)
.+
T Consensus 122 ~~ 123 (133)
T 2ef7_A 122 AI 123 (133)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 57
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.78 E-value=1.6e-18 Score=140.39 Aligned_cols=129 Identities=14% Similarity=0.176 Sum_probs=111.4
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCC-----ccccccc
Q 019128 116 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP-----ADSTLVE 189 (346)
Q Consensus 116 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~-----~~~~~v~ 189 (346)
+...+++++|.++.+++++.+++++.+|++.|.+++++++||+| +|+++|++|.+|++ ........ ....++.
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~-~~~~~~~~~~~~~~~~~~v~ 89 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIM-NSIFGLERIEFEKLDQITVE 89 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHH-HHHBCSSSBCGGGTTTSBHH
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHH-HHhhhhcccchhhhccCCHH
Confidence 44567899998544789999999999999999999999999999 78999999999997 55543211 2357899
Q ss_pred cccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHcc
Q 019128 190 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 247 (346)
Q Consensus 190 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i~ 247 (346)
++|.+++.++++++++.++++.|.++++ +||+|++|+++|+||..|+++++...+.
T Consensus 90 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~ 145 (159)
T 1yav_A 90 EVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIR 145 (159)
T ss_dssp HHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred HhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHH
Confidence 9999999999999999999999999987 9999999999999999999998776664
No 58
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.77 E-value=2.4e-18 Score=136.72 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=104.3
Q ss_pred CCccc---cccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC-Cccccccccccc
Q 019128 119 PSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEKVMT 193 (346)
Q Consensus 119 ~~v~~---im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~-~~~~~~v~~~m~ 193 (346)
.++++ +|. ++++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +.+..+. .....++.++|.
T Consensus 8 ~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~v~~~m~ 84 (144)
T 2nyc_A 8 IPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL-GLIKGGIYNDLSLSVGEALM 84 (144)
T ss_dssp SBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHHHTC----CCSBHHHHHH
T ss_pred cchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHH-HHhcccccccCCccHHHHHh
Confidence 45666 665 4788999999999999999999999999999 88999999999998 5444321 123568999997
Q ss_pred c------CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 194 P------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 194 ~------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
+ ++.++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++..
T Consensus 85 ~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 85 RRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred cCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 6 68999999999999999999999999999999999999999999997653
No 59
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.77 E-value=2.2e-18 Score=133.62 Aligned_cols=121 Identities=20% Similarity=0.249 Sum_probs=103.7
Q ss_pred ccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhhc
Q 019128 18 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 97 (346)
Q Consensus 18 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (346)
++|+++|.++++++++++++.+|++.|.+++++.+||+|+|+++|+++..|+++.....
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~--------------------- 59 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEG--------------------- 59 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHT---------------------
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcC---------------------
Confidence 47899999999999999999999999999999999999999999999999997642210
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHH
Q 019128 98 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 177 (346)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~ 177 (346)
......++.++|.+ ++.++++++++.++++.|.+++.+++||+++|+++|++|.+|++ +.+
T Consensus 60 ----------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~-~~l 120 (125)
T 1pbj_A 60 ----------------DDLAEVKVWEVMER--DLVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDIL-RAK 120 (125)
T ss_dssp ----------------CCTTTSBHHHHCBC--GGGEECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHH
T ss_pred ----------------CcccccCHHHHcCC--CCeEECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHH-HHH
Confidence 00123457788874 78999999999999999999999999999999999999999998 444
Q ss_pred h
Q 019128 178 S 178 (346)
Q Consensus 178 ~ 178 (346)
.
T Consensus 121 ~ 121 (125)
T 1pbj_A 121 M 121 (125)
T ss_dssp C
T ss_pred H
Confidence 3
No 60
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.77 E-value=3.3e-19 Score=138.91 Aligned_cols=117 Identities=17% Similarity=0.184 Sum_probs=100.4
Q ss_pred cccccccccCC--CeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhh
Q 019128 17 ETPVSKVMTRN--PTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 17 ~~~v~dim~~~--~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
+.+|+++|++. ++++++++++.+|++.|.+++++++||+| + |+++|+||.+|+++.+.
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~------------------ 63 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMR------------------ 63 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGS------------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh------------------
Confidence 57899999954 99999999999999999999999999999 5 79999999999875311
Q ss_pred hhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHH
Q 019128 93 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 171 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~d 171 (346)
......+++++|.+ +.++++++++.++++.|.+++.+.+||+| +|+++|+||..|
T Consensus 64 ---------------------~~~~~~~v~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~d 119 (127)
T 3nqr_A 64 ---------------------SDAEAFSMDKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIED 119 (127)
T ss_dssp ---------------------TTCCCCCHHHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHH
T ss_pred ---------------------ccCCCCCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 00123467888853 67899999999999999999999999999 899999999999
Q ss_pred HHHH
Q 019128 172 ILMR 175 (346)
Q Consensus 172 ll~~ 175 (346)
+++.
T Consensus 120 ll~~ 123 (127)
T 3nqr_A 120 ILEL 123 (127)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9843
No 61
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.77 E-value=3.3e-18 Score=140.61 Aligned_cols=127 Identities=17% Similarity=0.221 Sum_probs=106.8
Q ss_pred HHhhcCCCCccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhh
Q 019128 8 VIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEK 83 (346)
Q Consensus 8 ~~~~~~~~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~ 83 (346)
++.+...+...+|+++|+ ++++++++++++.+|++.|.+++++++||+| + |+++|+|+.+|+++.....
T Consensus 26 ~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~------- 98 (173)
T 3ocm_A 26 MVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE------- 98 (173)
T ss_dssp HHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH-------
T ss_pred HHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC-------
Confidence 344444788999999997 4689999999999999999999999999998 5 7999999999998753210
Q ss_pred hhhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCE
Q 019128 84 GKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK 162 (346)
Q Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~ 162 (346)
...++. +|. +++++++++++.++++.|.+++.+.+||+| +|+
T Consensus 99 ---------------------------------~~~~v~-~~~---~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~ 141 (173)
T 3ocm_A 99 ---------------------------------GRVRRN-RLR---DPIIVHESIGILRLMDTLKRSRGQLVLVADEFGA 141 (173)
T ss_dssp ---------------------------------SSCCGG-GSB---CCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCC
T ss_pred ---------------------------------CcchhH-hcC---CCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 123456 443 588999999999999999999999999998 799
Q ss_pred EEEEeeHHHHHHHHHh
Q 019128 163 PRGILTSKDILMRVIS 178 (346)
Q Consensus 163 ~~Giit~~dll~~~~~ 178 (346)
++|+||..|++..+..
T Consensus 142 lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 142 IEGLVTPIDVFEAIAG 157 (173)
T ss_dssp EEEEECHHHHHHHHHC
T ss_pred EEEEEeHHHHHHHHhC
Confidence 9999999999955543
No 62
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.77 E-value=1e-18 Score=136.34 Aligned_cols=122 Identities=11% Similarity=0.188 Sum_probs=105.4
Q ss_pred CcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhh
Q 019128 16 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 95 (346)
Q Consensus 16 ~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (346)
...+++++|.+++.++++++++.+|++.|.+++++++||+|+|+++|+||.+|+++....
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~-------------------- 62 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKG-------------------- 62 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSS--------------------
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhh--------------------
Confidence 468999999999999999999999999999999999999999999999999998753100
Q ss_pred hccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHH
Q 019128 96 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 174 (346)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~ 174 (346)
......+++++|.+ ++.++.+++++.++++.|.+++.+++||+| +|+++|++|..|++
T Consensus 63 ------------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll- 121 (128)
T 3gby_A 63 ------------------WPTVKEKLGEELLE--TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRIL- 121 (128)
T ss_dssp ------------------SCCTTCBCCGGGCB--CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHH-
T ss_pred ------------------CCcccCcHHHHccC--CCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHH-
Confidence 00012458889974 788999999999999999999999999998 89999999999998
Q ss_pred HHHh
Q 019128 175 RVIS 178 (346)
Q Consensus 175 ~~~~ 178 (346)
+.+.
T Consensus 122 ~~l~ 125 (128)
T 3gby_A 122 GFLA 125 (128)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 63
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.77 E-value=2.8e-18 Score=142.51 Aligned_cols=122 Identities=24% Similarity=0.282 Sum_probs=107.8
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCe
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 197 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 197 (346)
.+++++|.+ +++++++++++.+|+++|.+++++++||++ +|+++|++|.+|++..+..........++.++|.+++.
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~~ 86 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPIP 86 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSCC
T ss_pred cCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCCc
Confidence 578999974 789999999999999999999999999998 79999999999998333322222336789999999999
Q ss_pred eecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 198 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 198 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
++++++++.++++.|.+++.+++||+|++|+++|+||..||++++
T Consensus 87 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 87 KVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp EEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTS
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 999999999999999999999999999989999999999999753
No 64
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.77 E-value=5.8e-18 Score=136.08 Aligned_cols=118 Identities=16% Similarity=0.221 Sum_probs=103.1
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcC-CCccccccccccc----
Q 019128 120 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-LPADSTLVEKVMT---- 193 (346)
Q Consensus 120 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~-~~~~~~~v~~~m~---- 193 (346)
+++++ ++++++.+++++.+|++.|.+++++++||+| +|+++|++|.+|++ +....+ ......++.++|.
T Consensus 24 ~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~-~~~~~~~~~~~~~~v~~~m~~~~~ 98 (152)
T 2uv4_A 24 QIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI-NLAAEKTYNNLDVSVTKALQHRSH 98 (152)
T ss_dssp TCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHH-HHHHCSSCCCTTSBGGGGGGTCCH
T ss_pred cCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHH-HHhcchhhhhhcchHHHHHhhhhc
Confidence 45565 3588899999999999999999999999999 89999999999998 444433 1223568999996
Q ss_pred --cCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 194 --PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 194 --~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
+++.++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++
T Consensus 99 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 99 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp HHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999874
No 65
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.77 E-value=2.3e-18 Score=139.06 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=102.9
Q ss_pred Cccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhh
Q 019128 16 EETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 16 ~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
...+++++|+ .+++++++++|+.+|+++|.+++++++||+| +|+++|++|.+|+++++....
T Consensus 13 l~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~--------------- 77 (156)
T 3k6e_A 13 LLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHD--------------- 77 (156)
T ss_dssp HHTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHT---------------
T ss_pred hhccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcc---------------
Confidence 3458899998 5799999999999999999999999999998 699999999999987643210
Q ss_pred hhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHH
Q 019128 93 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 171 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~d 171 (346)
.........++.++|.+ ++.++++++++.++++.|.+++ .+||+| +|+++|+||.+|
T Consensus 78 ------------------~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~D 135 (156)
T 3k6e_A 78 ------------------LSQEIMADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKS 135 (156)
T ss_dssp ------------------CCHHHHTTSBGGGTCBC--SCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHH
T ss_pred ------------------cccccccccCHHHhhcC--CceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHH
Confidence 00112345678999974 7899999999999999998776 499998 899999999999
Q ss_pred HHHHH
Q 019128 172 ILMRV 176 (346)
Q Consensus 172 ll~~~ 176 (346)
+++.+
T Consensus 136 il~~~ 140 (156)
T 3k6e_A 136 ILKAV 140 (156)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99444
No 66
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.76 E-value=6.1e-18 Score=137.19 Aligned_cols=128 Identities=20% Similarity=0.300 Sum_probs=106.1
Q ss_pred CcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhh
Q 019128 16 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 94 (346)
Q Consensus 16 ~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 94 (346)
..++|+++|+++++++++++|+.+|++.|.+++++++||+| +|+++|+||..|+++.........
T Consensus 3 ~~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~-------------- 68 (160)
T 2o16_A 3 LMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRS-------------- 68 (160)
T ss_dssp CCCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC----------------
T ss_pred CcCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhccc--------------
Confidence 45789999999999999999999999999999999999999 799999999999987643211000
Q ss_pred hhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHH
Q 019128 95 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILM 174 (346)
Q Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~ 174 (346)
. .-.......++.++|.+ +++++++++++.++++.|.+++.+++||+++|+++|+||..|++.
T Consensus 69 --------------~-~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~ 131 (160)
T 2o16_A 69 --------------A-QGDSLAFETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVT 131 (160)
T ss_dssp ----------------------CCCBHHHHSCS--CEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHH
T ss_pred --------------c-cccchhcccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHH
Confidence 0 00111234568888874 789999999999999999999999999999999999999999984
No 67
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.76 E-value=4.3e-18 Score=137.56 Aligned_cols=138 Identities=15% Similarity=0.220 Sum_probs=106.6
Q ss_pred cccccccc------CCCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhh
Q 019128 18 TPVSKVMT------RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 91 (346)
Q Consensus 18 ~~v~dim~------~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~ 91 (346)
.+|+|+|. ++++++++++++.+|++.|.+++++++||.++|+++|+||..|+++.+...
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~--------------- 71 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQ--------------- 71 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGG---------------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhc---------------
Confidence 57999999 556999999999999999999999999997789999999999998753210
Q ss_pred hhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHH
Q 019128 92 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 171 (346)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~d 171 (346)
+ ......+++++|.+ ++.++.+++++.++++.|.+++++++||+|+|+++|+||.+|
T Consensus 72 -------~--------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~d 128 (157)
T 4fry_A 72 -------E--------------RSSKATRVEEIMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGD 128 (157)
T ss_dssp -------T--------------CCSSSCBHHHHSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHH
T ss_pred -------c--------------CCccccCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHH
Confidence 0 00124567888874 788999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccccccccccc
Q 019128 172 ILMRVISQNLPADSTLVEKVMTP 194 (346)
Q Consensus 172 ll~~~~~~~~~~~~~~v~~~m~~ 194 (346)
++ +.+..........+++++..
T Consensus 129 il-~~l~~~~~~~~~~~~~~i~~ 150 (157)
T 4fry_A 129 LV-KSVIADQQFTISQLEHYIHG 150 (157)
T ss_dssp HH-HHHHTTCCCCCC--------
T ss_pred HH-HHHHHHHHhhHHHHHhhccC
Confidence 99 54444333323455555543
No 68
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.76 E-value=4.3e-18 Score=133.18 Aligned_cols=121 Identities=9% Similarity=0.131 Sum_probs=99.3
Q ss_pred ccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee--CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhh
Q 019128 17 ETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 17 ~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd--~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
.++|+++|+ ++++++++++|+.+|++.|.+++++++||++ +|+++|++|.+|+++.....
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~---------------- 64 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK---------------- 64 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS----------------
T ss_pred CcCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc----------------
Confidence 368999997 4689999999999999999999999999996 38999999999998753110
Q ss_pred hhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHH
Q 019128 93 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 171 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~d 171 (346)
.. ....++.++|. +++++++++++.++++.|.+++.+.+||+| +|+++|++|.+|
T Consensus 65 -------~~--------------~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~D 120 (130)
T 3hf7_A 65 -------KE--------------FTKEIMLRAAD---EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVED 120 (130)
T ss_dssp -------SC--------------CCHHHHHHHSB---CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHH
T ss_pred -------Cc--------------cchhhHHHhcc---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHH
Confidence 00 00012455563 478999999999999999999999999998 799999999999
Q ss_pred HHHHHH
Q 019128 172 ILMRVI 177 (346)
Q Consensus 172 ll~~~~ 177 (346)
+++.+.
T Consensus 121 il~~l~ 126 (130)
T 3hf7_A 121 ILEEIV 126 (130)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 995443
No 69
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.76 E-value=3e-18 Score=144.63 Aligned_cols=123 Identities=11% Similarity=0.053 Sum_probs=107.7
Q ss_pred HhhcCCCCcccccccccCCCeeecCCccHHHHHHHHHhC---Ccceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhh
Q 019128 9 IARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG---KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKG 84 (346)
Q Consensus 9 ~~~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~---~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~ 84 (346)
+.....+.+.+|+++|+++++++++++|+.+|++.|.++ +++.+||+| +|+++|+||.+|++..
T Consensus 45 i~~~l~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~------------ 112 (205)
T 3kxr_A 45 FELYDQYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH------------ 112 (205)
T ss_dssp HHHHHHSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS------------
T ss_pred HHHHhCCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC------------
Confidence 333447788999999999999999999999999999987 899999999 7999999999998542
Q ss_pred hhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEE
Q 019128 85 KAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKP 163 (346)
Q Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~ 163 (346)
....+++++|.+ +++++++++++.++++.|.+++.+.+||+| +|++
T Consensus 113 -------------------------------~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~l 159 (205)
T 3kxr_A 113 -------------------------------EPHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGEL 159 (205)
T ss_dssp -------------------------------CTTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBE
T ss_pred -------------------------------CCcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeE
Confidence 123468899974 788999999999999999999999999999 7999
Q ss_pred EEEeeHHHHHHHH
Q 019128 164 RGILTSKDILMRV 176 (346)
Q Consensus 164 ~Giit~~dll~~~ 176 (346)
+|+||..|++..+
T Consensus 160 vGiIT~~Dil~~i 172 (205)
T 3kxr_A 160 IGRVTLRAATALV 172 (205)
T ss_dssp EEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHH
Confidence 9999999998433
No 70
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.76 E-value=8.9e-18 Score=136.07 Aligned_cols=125 Identities=15% Similarity=0.242 Sum_probs=106.5
Q ss_pred CCCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhh
Q 019128 14 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 14 ~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
.+..++|+++|++ ++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++.....
T Consensus 13 ~l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~---------------- 75 (159)
T 3fv6_A 13 KLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ---------------- 75 (159)
T ss_dssp HHTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC----------------
T ss_pred HHhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc----------------
Confidence 3567899999997 56999999999999999999999999999 89999999999998753100
Q ss_pred hhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CC---EEEEEee
Q 019128 93 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN---KPRGILT 168 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~---~~~Giit 168 (346)
......++.++|.+..+++++.+++++.++++.|.+++++++||++ +| +++|+||
T Consensus 76 ---------------------~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit 134 (159)
T 3fv6_A 76 ---------------------QELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVT 134 (159)
T ss_dssp ---------------------SCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEE
T ss_pred ---------------------CcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEE
Confidence 0123456889998544788999999999999999999999999999 66 9999999
Q ss_pred HHHHHHHH
Q 019128 169 SKDILMRV 176 (346)
Q Consensus 169 ~~dll~~~ 176 (346)
.+|+++.+
T Consensus 135 ~~dil~~l 142 (159)
T 3fv6_A 135 KTNMTKIL 142 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998433
No 71
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.76 E-value=5.9e-18 Score=140.47 Aligned_cols=131 Identities=11% Similarity=0.163 Sum_probs=110.6
Q ss_pred HhCCCCccccccCCCc--eeEe--CCCCcHHHHHHHHHHcCCcEEEEE--e-CCEEEEEeeHHHHHHHHHhcC-------
Q 019128 115 RMFRPSLSTIIPEKSK--VVTI--SPTDTVLMATKKMLELRLSSAVVT--V-ENKPRGILTSKDILMRVISQN------- 180 (346)
Q Consensus 115 ~~~~~~v~~im~~~~~--~~~v--~~~~~l~~~~~~m~~~~~~~l~V~--d-~~~~~Giit~~dll~~~~~~~------- 180 (346)
.+...+++++|.+..+ ++++ .+++++.+|++.|.+++++++||+ + +|+++|+||.+|++..+....
T Consensus 7 ~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 7 FAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp --CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 3456789999986322 7778 999999999999999999999999 6 789999999999984433210
Q ss_pred ----------------CCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 181 ----------------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 181 ----------------~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
......++.++|.+++.++++++++.++++.|.+++.+++||+| +|+++|+||..||++++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 01235689999999999999999999999999999999999999 8999999999999998766
Q ss_pred Hc
Q 019128 245 TV 246 (346)
Q Consensus 245 ~i 246 (346)
..
T Consensus 166 ~~ 167 (185)
T 2j9l_A 166 MA 167 (185)
T ss_dssp HC
T ss_pred hh
Confidence 55
No 72
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.75 E-value=5.8e-19 Score=142.67 Aligned_cols=123 Identities=17% Similarity=0.230 Sum_probs=105.0
Q ss_pred HHhhcCCCCcccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhh
Q 019128 8 VIARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEK 83 (346)
Q Consensus 8 ~~~~~~~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~ 83 (346)
++.+...+...+|+++|++ +++++++++|+.+|++.|.+++++++||+| + ++++|+||.+|+++....
T Consensus 28 ~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~-------- 99 (156)
T 3oi8_A 28 RLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN-------- 99 (156)
T ss_dssp HHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC--------
T ss_pred HHHHHhccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc--------
Confidence 3444447889999999996 789999999999999999999999999998 5 599999999998753100
Q ss_pred hhhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCE
Q 019128 84 GKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK 162 (346)
Q Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~ 162 (346)
. ...+++++|.+ ++++++++++.++++.|.+++.+.+||+| +|+
T Consensus 100 ------------------------------~--~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~ 144 (156)
T 3oi8_A 100 ------------------------------P--EQFHLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGG 144 (156)
T ss_dssp ------------------------------G--GGCCHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSS
T ss_pred ------------------------------C--CcccHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCC
Confidence 0 13457788863 78999999999999999999999999998 799
Q ss_pred EEEEeeHHHHH
Q 019128 163 PRGILTSKDIL 173 (346)
Q Consensus 163 ~~Giit~~dll 173 (346)
++|+||..|++
T Consensus 145 ~~Givt~~Dil 155 (156)
T 3oi8_A 145 TSGLVTFEDII 155 (156)
T ss_dssp EEEEEEHHHHC
T ss_pred EEEEEEHHHhc
Confidence 99999999985
No 73
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.75 E-value=1.2e-17 Score=131.90 Aligned_cols=126 Identities=21% Similarity=0.253 Sum_probs=107.4
Q ss_pred CCCCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhh
Q 019128 13 LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 91 (346)
Q Consensus 13 ~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~ 91 (346)
..+...+|+++|+++++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++..+..
T Consensus 2 ~~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~--------------- 66 (138)
T 2yzi_A 2 VMDMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVP--------------- 66 (138)
T ss_dssp -CCTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT---------------
T ss_pred cchhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhc---------------
Confidence 35778999999999999999999999999999999999999999 89999999999987431100
Q ss_pred hhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHH
Q 019128 92 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 170 (346)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~ 170 (346)
......++.++|.+ ++.++++++++.++++.|.+++.+++ |++ +|+++|++|..
T Consensus 67 ----------------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~ 121 (138)
T 2yzi_A 67 ----------------------GLPYDIPVERIMTR--NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLS 121 (138)
T ss_dssp ----------------------CCCTTSBGGGTCBC--SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHH
T ss_pred ----------------------CCcccCCHHHHhhC--CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHH
Confidence 00123568889974 78899999999999999999999999 999 99999999999
Q ss_pred HHHHHHHhc
Q 019128 171 DILMRVISQ 179 (346)
Q Consensus 171 dll~~~~~~ 179 (346)
|++ +.+..
T Consensus 122 dil-~~~~~ 129 (138)
T 2yzi_A 122 DLL-EASRR 129 (138)
T ss_dssp HHH-HHHHC
T ss_pred HHH-HHHHH
Confidence 998 55443
No 74
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.75 E-value=8.4e-18 Score=132.23 Aligned_cols=123 Identities=15% Similarity=0.201 Sum_probs=104.8
Q ss_pred cc-ccccccc---CCCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhh
Q 019128 17 ET-PVSKVMT---RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 17 ~~-~v~dim~---~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
++ +|+++|+ ++++++++++|+.+|++.|.+++++++||+|+|+++|++|..|+++.+...
T Consensus 4 ~m~~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~---------------- 67 (135)
T 2rc3_A 4 HMKTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLL---------------- 67 (135)
T ss_dssp -CCBHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGS----------------
T ss_pred cceeHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHc----------------
Confidence 44 8999999 899999999999999999999999999999999999999999997532100
Q ss_pred hhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHH
Q 019128 93 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDI 172 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dl 172 (346)
+ ......++.++|.+ ++.++++++++.++++.|.+++.+++||+++|+++|+||..|+
T Consensus 68 ------~--------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dl 125 (135)
T 2rc3_A 68 ------D--------------KPVKDTQVKEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDL 125 (135)
T ss_dssp ------S--------------SCGGGSBGGGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHH
T ss_pred ------C--------------CCcccCCHHHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHH
Confidence 0 00123568889975 7889999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 019128 173 LMRVIS 178 (346)
Q Consensus 173 l~~~~~ 178 (346)
+ +.+.
T Consensus 126 l-~~~~ 130 (135)
T 2rc3_A 126 V-KDAI 130 (135)
T ss_dssp H-HHHH
T ss_pred H-HHHH
Confidence 8 4443
No 75
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.75 E-value=1.5e-18 Score=136.90 Aligned_cols=117 Identities=13% Similarity=0.160 Sum_probs=101.1
Q ss_pred ccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhh
Q 019128 17 ETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 17 ~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~-~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
+.+|+++|+ ++++++++++|+.+|++.|.+++++++||+| + |+++|+||.+|+++.+..
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK----------------- 64 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS-----------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh-----------------
Confidence 578999999 6789999999999999999999999999998 5 799999999998764210
Q ss_pred hhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHH
Q 019128 93 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 171 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~d 171 (346)
......+++++|.+ ++++++++++.++++.|.+++.+.+||+| +|+++|+||.+|
T Consensus 65 ---------------------~~~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~D 120 (136)
T 3lfr_A 65 ---------------------ADGDSDDVKKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIED 120 (136)
T ss_dssp ---------------------SSGGGCCGGGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHH
T ss_pred ---------------------ccCCCcCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 00123468899963 88999999999999999999999999998 799999999999
Q ss_pred HHH
Q 019128 172 ILM 174 (346)
Q Consensus 172 ll~ 174 (346)
+++
T Consensus 121 il~ 123 (136)
T 3lfr_A 121 VLE 123 (136)
T ss_dssp HHT
T ss_pred HHH
Confidence 983
No 76
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.75 E-value=1.8e-17 Score=131.44 Aligned_cols=116 Identities=15% Similarity=0.207 Sum_probs=101.6
Q ss_pred cccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CC--eEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhh
Q 019128 17 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NG--EVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 93 (346)
Q Consensus 17 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~--~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
.++|+++|+++++++++++|+.+|++.|.+++++++||+| +| +++|+||..|+++.+...
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~----------------- 66 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR----------------- 66 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT-----------------
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC-----------------
Confidence 4789999999999999999999999999999999999999 56 999999999997653110
Q ss_pred hhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHH
Q 019128 94 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 172 (346)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dl 172 (346)
.....++.++|.+ ++++++++ ++.++++.|.+++.+++||++ +|+++|++|..|+
T Consensus 67 ---------------------~~~~~~v~~~m~~--~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dl 122 (141)
T 2rih_A 67 ---------------------LDLDGPAMPIANS--PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 122 (141)
T ss_dssp ---------------------CCTTSBSGGGCBC--CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred ---------------------CCCCCCHHHHcCC--CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHH
Confidence 0123568889874 78999999 999999999999999999999 8999999999999
Q ss_pred H
Q 019128 173 L 173 (346)
Q Consensus 173 l 173 (346)
+
T Consensus 123 l 123 (141)
T 2rih_A 123 C 123 (141)
T ss_dssp H
T ss_pred H
Confidence 7
No 77
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.75 E-value=1.4e-17 Score=134.61 Aligned_cols=141 Identities=16% Similarity=0.215 Sum_probs=109.4
Q ss_pred hcCCCCcccccccccCCCeeecCCccHHHHHHHHHhCCcce-eeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhh
Q 019128 11 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH-LPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 89 (346)
Q Consensus 11 ~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~-lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~ 89 (346)
.+..+...+|+++|+++++++++++|+.+|++.|.+++++. +||+|+++++|+||..|+++.....+ . .
T Consensus 9 ~~~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~----~------~ 78 (157)
T 1o50_A 9 HHHHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHF----F------G 78 (157)
T ss_dssp -CTTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHH----H------C
T ss_pred hhhhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhH----H------h
Confidence 34567889999999999999999999999999999999999 99999449999999999987643221 0 0
Q ss_pred hhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEee
Q 019128 90 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 168 (346)
Q Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit 168 (346)
.. .....+.. ........++.++|.+ ++++++++++.++++.|.+++++++||+| +|+++|+||
T Consensus 79 ~~-----------~~~~~~~~-~~~~~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit 143 (157)
T 1o50_A 79 FI-----------PKEELIRS-SMKRLIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLN 143 (157)
T ss_dssp CC-----------C--------CCCCCSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEE
T ss_pred hh-----------ccHHHHHH-HHHHHcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEE
Confidence 00 00000000 0001234568888873 88999999999999999999999999999 899999999
Q ss_pred HHHHHHHH
Q 019128 169 SKDILMRV 176 (346)
Q Consensus 169 ~~dll~~~ 176 (346)
..|+++.+
T Consensus 144 ~~dll~~l 151 (157)
T 1o50_A 144 SLEILLAL 151 (157)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998433
No 78
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.74 E-value=1.6e-17 Score=133.05 Aligned_cols=117 Identities=14% Similarity=0.168 Sum_probs=102.1
Q ss_pred ccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhh
Q 019128 18 TPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 94 (346)
Q Consensus 18 ~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~ 94 (346)
++|+++|.+ +++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++.+...
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~------------------ 89 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTG------------------ 89 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSS------------------
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcC------------------
Confidence 599999998 999999999999999999999999999999 79999999999998652100
Q ss_pred hhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHH
Q 019128 95 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 173 (346)
Q Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll 173 (346)
......++.++|.+ +++++++++++.++++.|.+++++.+||+++++++|+||..|++
T Consensus 90 -------------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil 147 (149)
T 3k2v_A 90 -------------------VDMRDASIADVMTR--GGIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLL 147 (149)
T ss_dssp -------------------SCCTTCBHHHHSEE--SCCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHT
T ss_pred -------------------CCcccCcHHHHcCC--CCeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhh
Confidence 00123557788874 68899999999999999999999999999977999999999986
No 79
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.74 E-value=1.7e-17 Score=134.90 Aligned_cols=132 Identities=17% Similarity=0.182 Sum_probs=103.9
Q ss_pred CCCCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee---CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhh
Q 019128 13 LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 89 (346)
Q Consensus 13 ~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd---~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~ 89 (346)
......+|+++|+++++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++.........
T Consensus 8 ~~~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~--------- 78 (164)
T 2pfi_A 8 IGSHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR--------- 78 (164)
T ss_dssp --CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC--------------
T ss_pred ccccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc---------
Confidence 35678999999999999999999999999999999999999998 489999999999987532110000
Q ss_pred hhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCC----CceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEE
Q 019128 90 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 165 (346)
Q Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~G 165 (346)
......++.++|.+. ..++++++++++.++++.|.+++.+++||+++|+++|
T Consensus 79 ------------------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~G 134 (164)
T 2pfi_A 79 ------------------------APGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVG 134 (164)
T ss_dssp --------------------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEE
T ss_pred ------------------------CCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEE
Confidence 001123355555431 1168899999999999999999999999999999999
Q ss_pred EeeHHHHHHHHH
Q 019128 166 ILTSKDILMRVI 177 (346)
Q Consensus 166 iit~~dll~~~~ 177 (346)
+||.+|++..+.
T Consensus 135 iit~~dil~~~~ 146 (164)
T 2pfi_A 135 CVSWVEMKKAIS 146 (164)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999984433
No 80
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.74 E-value=7.8e-18 Score=132.85 Aligned_cols=121 Identities=26% Similarity=0.355 Sum_probs=103.7
Q ss_pred CCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHH-HHHHHHHHHHHHhhhhhHhhhhh
Q 019128 15 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKC-LYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 15 ~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dl-l~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
+...+++++|+++++++++++++.+|++.|.+++++++||+| +|+++|+++..|+ ++.+..
T Consensus 5 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 67 (138)
T 2p9m_A 5 LKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRD----------------- 67 (138)
T ss_dssp CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTT-----------------
T ss_pred cccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhh-----------------
Confidence 567899999999999999999999999999999999999999 7999999999998 654210
Q ss_pred hhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcC-----CcEEEEEe-CCEEEEE
Q 019128 93 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR-----LSSAVVTV-ENKPRGI 166 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~-----~~~l~V~d-~~~~~Gi 166 (346)
......+++++|.+ ++.++++++++.++++.|.+++ .+++||++ +|+++|+
T Consensus 68 ---------------------~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Gi 124 (138)
T 2p9m_A 68 ---------------------KYTLETTIGDVMTK--DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGI 124 (138)
T ss_dssp ---------------------CCCSSCBHHHHSCS--SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEE
T ss_pred ---------------------cccCCcCHHHHhCC--CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEE
Confidence 00123457778874 6889999999999999999999 99999999 8999999
Q ss_pred eeHHHHHHH
Q 019128 167 LTSKDILMR 175 (346)
Q Consensus 167 it~~dll~~ 175 (346)
+|..|+++.
T Consensus 125 it~~dll~~ 133 (138)
T 2p9m_A 125 ISDGDIIRT 133 (138)
T ss_dssp EEHHHHHHH
T ss_pred EEHHHHHHH
Confidence 999999833
No 81
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.73 E-value=2.4e-17 Score=133.94 Aligned_cols=126 Identities=10% Similarity=0.161 Sum_probs=107.5
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe---CCEEEEEeeHHHHHHHHHhcCCC----ccccccc
Q 019128 117 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLP----ADSTLVE 189 (346)
Q Consensus 117 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d---~~~~~Giit~~dll~~~~~~~~~----~~~~~v~ 189 (346)
...+++++|.+ +++++++++++.+|++.|.+++++++||+| +|+++|++|.+|++ +....+.. ....++.
T Consensus 11 ~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~v~ 87 (164)
T 2pfi_A 11 HHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLV-QALQAEPPSRAPGHQQCLQ 87 (164)
T ss_dssp CSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHH-HHHHC-------CCCCBHH
T ss_pred cCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHH-HHHHhhccccCCcccchhh
Confidence 34568899985 788899999999999999999999999998 48999999999998 54433221 1245788
Q ss_pred cccccC------CeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 190 KVMTPN------PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 190 ~~m~~~------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
++|.++ +.++++++++.++++.|.+++.+++||+| +|+++|+||..||++++....
T Consensus 88 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 88 DILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp HHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred hhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhh
Confidence 999776 79999999999999999999999999999 799999999999999876655
No 82
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.73 E-value=1.9e-17 Score=132.65 Aligned_cols=134 Identities=19% Similarity=0.231 Sum_probs=105.0
Q ss_pred CcccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhh
Q 019128 16 EETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 16 ~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
..++|+++|++ +++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++.......
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~-------------- 68 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDST-------------- 68 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----C--------------
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCc--------------
Confidence 46899999998 899999999999999999999999999999 6899999999999753210000
Q ss_pred hhhhccCCCCCChhhHH--HHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeH
Q 019128 93 GVEKHWGTSISGPNTFI--ETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 169 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~--~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~ 169 (346)
...+. ..........++.++|.+ +++++++++++.++++.|.+++++++||++ +|+++|+||.
T Consensus 69 ------------~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 69 ------------WKTFNAVQKLLSKTNGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp ------------CHHHHHHHTC-----CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEH
T ss_pred ------------ccchHHHHHHHHHhccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEH
Confidence 00000 000111234568888985 678899999999999999999999999999 8999999999
Q ss_pred HHHHHHHH
Q 019128 170 KDILMRVI 177 (346)
Q Consensus 170 ~dll~~~~ 177 (346)
+|+++.+.
T Consensus 135 ~dil~~~~ 142 (152)
T 4gqw_A 135 GNVVRAAL 142 (152)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99994433
No 83
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.73 E-value=1.3e-17 Score=133.56 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=104.8
Q ss_pred CCCccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhh
Q 019128 14 NLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 90 (346)
Q Consensus 14 ~~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~ 90 (346)
.+..++|+++|+ .+++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++.+...
T Consensus 11 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~-------------- 76 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGL-------------- 76 (150)
T ss_dssp HHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCS--------------
T ss_pred hhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhh--------------
Confidence 456789999999 5699999999999999999999999999998 89999999999998753100
Q ss_pred hhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeH
Q 019128 91 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 169 (346)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~ 169 (346)
.... .......++.++|.+ ++.++++++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 77 ----------~~~~--------~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~ 134 (150)
T 3lqn_A 77 ----------ERIE--------FERLEEMKVEQVMKQ--DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTR 134 (150)
T ss_dssp ----------SSBC--------GGGGGGCBGGGTCBS--SCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEH
T ss_pred ----------cccc--------hhHHhcCCHHHHhcC--CCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEH
Confidence 0000 011234568899974 78999999999999999999886 99999 8999999999
Q ss_pred HHHHHHH
Q 019128 170 KDILMRV 176 (346)
Q Consensus 170 ~dll~~~ 176 (346)
.|+++.+
T Consensus 135 ~dil~~l 141 (150)
T 3lqn_A 135 RAILKLL 141 (150)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998433
No 84
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.72 E-value=6e-17 Score=130.70 Aligned_cols=130 Identities=13% Similarity=0.243 Sum_probs=104.2
Q ss_pred CCCCcccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhh
Q 019128 13 LNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAA 89 (346)
Q Consensus 13 ~~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~ 89 (346)
..+...+|+++|.+ +++++++++|+.+|++.|.+++++++||+| +|+++|+||..|+++.....
T Consensus 6 ~~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~------------- 72 (157)
T 2emq_A 6 NEFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGL------------- 72 (157)
T ss_dssp ----CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCS-------------
T ss_pred hhHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcc-------------
Confidence 45678999999996 899999999999999999999999999999 79999999999997642100
Q ss_pred hhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEee
Q 019128 90 AVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILT 168 (346)
Q Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit 168 (346)
... . .......++.++|.+ +++++++++++.++++.|.++++ +||++ +|+++|+||
T Consensus 73 ----------~~~-~--------~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit 129 (157)
T 2emq_A 73 ----------ERI-E--------FERLETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFT 129 (157)
T ss_dssp ----------SSB-C--------GGGGGTCBGGGTCBC--CCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEE
T ss_pred ----------ccc-c--------hHHhcCCcHHHHhCC--CCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEE
Confidence 000 0 011234568899975 78899999999999999999987 99999 799999999
Q ss_pred HHHHHHHHHhc
Q 019128 169 SKDILMRVISQ 179 (346)
Q Consensus 169 ~~dll~~~~~~ 179 (346)
..|++ +.+..
T Consensus 130 ~~dil-~~~~~ 139 (157)
T 2emq_A 130 RREVL-KQLNK 139 (157)
T ss_dssp HHHHH-HHHHH
T ss_pred HHHHH-HHHHH
Confidence 99998 44443
No 85
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.72 E-value=2.6e-16 Score=136.26 Aligned_cols=161 Identities=16% Similarity=0.137 Sum_probs=110.1
Q ss_pred CCCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeC---CeEEEEEehHHHHHHHHHHHHHHHhh-------
Q 019128 14 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN---GEVIALLDIAKCLYDAIARMERAAEK------- 83 (346)
Q Consensus 14 ~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~---~~~vGivt~~dll~~~~~~~~~~~~~------- 83 (346)
....++|+|+|+++++++.+++++.+|.++|.+++++++||+|+ ++++|+|+..||++++..........
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 56788999999999999999999999999999999999999983 58999999999998754432111000
Q ss_pred ----------------hhhHhhhhhhh------hh---------cc-----C----------C----------C------
Q 019128 84 ----------------GKAIAAAVEGV------EK---------HW-----G----------T----------S------ 101 (346)
Q Consensus 84 ----------------~~~~~~~~~~~------~~---------~~-----g----------~----------~------ 101 (346)
........... +. .. + . .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 00000000000 00 00 0 0 0
Q ss_pred -CCChhhHHHHHHHHhCCCCc--c-ccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHH
Q 019128 102 -ISGPNTFIETLRERMFRPSL--S-TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 177 (346)
Q Consensus 102 -~~~~~~~~~~~~~~~~~~~v--~-~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~ 177 (346)
....... ....+.....++ . .+|.+ .++++.+++++.++..+|...|++++||++.|+++||||.+|++ +++
T Consensus 169 ~~i~~~~~-~~~~~~~l~~~Vdl~~~~md~--sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrkDl~-kai 244 (250)
T 2d4z_A 169 EMLTLEEI-YRWEQREKNVVVNFETCRIDQ--SPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALAEIQ-AAI 244 (250)
T ss_dssp SCCBHHHH-HHHHHHHTTCBCCTTSSCEEC--CSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHH
T ss_pred cccChhhh-hhHHHHhcCceeccccccccC--CCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHHHHH-HHH
Confidence 0000000 011111123334 3 36775 88999999999999999999999999999999999999999998 655
Q ss_pred h
Q 019128 178 S 178 (346)
Q Consensus 178 ~ 178 (346)
.
T Consensus 245 ~ 245 (250)
T 2d4z_A 245 E 245 (250)
T ss_dssp H
T ss_pred H
Confidence 4
No 86
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.72 E-value=5.5e-18 Score=132.90 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=101.1
Q ss_pred CCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhh
Q 019128 15 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 93 (346)
Q Consensus 15 ~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
+.-.+|+++|.++++++++++|+.+|++.|.+++++++||+| +|+++|++|..|+++..+..
T Consensus 5 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 67 (133)
T 1y5h_A 5 FTMTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA----------------- 67 (133)
T ss_dssp ---CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGG-----------------
T ss_pred hhhcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhc-----------------
Confidence 344699999999999999999999999999999999999997 89999999999987421100
Q ss_pred hhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHH
Q 019128 94 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 173 (346)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll 173 (346)
+. .....+++++|.+ +++++++++++.++++.|.+++.+++||+++|+++|++|.+|++
T Consensus 68 -----~~--------------~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil 126 (133)
T 1y5h_A 68 -----GL--------------DPNTATAGELARD--SIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIA 126 (133)
T ss_dssp -----TC--------------CTTTSBHHHHHTT--CCCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH
T ss_pred -----CC--------------CccccCHHHHhcC--CCEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH
Confidence 00 0123457777764 78899999999999999999999999999999999999999998
No 87
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.72 E-value=7.2e-17 Score=133.85 Aligned_cols=149 Identities=15% Similarity=0.127 Sum_probs=107.9
Q ss_pred CCCcccccccccCC----Ceee--cCCccHHHHHHHHHhCCcceeeee--e-CCeEEEEEehHHHHHHHHHHHHHHHhhh
Q 019128 14 NLEETPVSKVMTRN----PTFV--LSDTLAVEALQKMVQGKFRHLPVV--E-NGEVIALLDIAKCLYDAIARMERAAEKG 84 (346)
Q Consensus 14 ~~~~~~v~dim~~~----~i~v--~~~~~l~ea~~~m~~~~~~~lpVv--d-~~~~vGivt~~dll~~~~~~~~~~~~~~ 84 (346)
-+...+|+++|+++ ++++ ++++++.+|++.|.+++++++||+ | +|+++|+||..|+++....... ..
T Consensus 7 ~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~----~~ 82 (185)
T 2j9l_A 7 FAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARK----KQ 82 (185)
T ss_dssp --CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHT----SC
T ss_pred hhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcc----cC
Confidence 35678999999987 7888 999999999999999999999999 6 7999999999999876432210 00
Q ss_pred hhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEE
Q 019128 85 KAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPR 164 (346)
Q Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~ 164 (346)
... .............. . ........++.++|.+ +++++++++++.++++.|.+++.+++||+++|+++
T Consensus 83 ~~~---~~~~~~~~~~~~~~-~-----~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~v 151 (185)
T 2j9l_A 83 DGV---VSTSIIYFTEHSPP-L-----PPYTPPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLL 151 (185)
T ss_dssp SCC---CTTCEEECSSSCCC-C-----CTTCCCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEE
T ss_pred CCc---cccceeecccCCcc-c-----ccccccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEE
Confidence 000 00000000000000 0 0001223468889974 68899999999999999999999999999999999
Q ss_pred EEeeHHHHHHHHH
Q 019128 165 GILTSKDILMRVI 177 (346)
Q Consensus 165 Giit~~dll~~~~ 177 (346)
|+||..|+++.+.
T Consensus 152 Giit~~dll~~l~ 164 (185)
T 2j9l_A 152 GIITKKDVLKHIA 164 (185)
T ss_dssp EEEEHHHHHHHHH
T ss_pred EEEEHHHHHHHHH
Confidence 9999999984443
No 88
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.71 E-value=5.8e-17 Score=128.67 Aligned_cols=127 Identities=18% Similarity=0.272 Sum_probs=102.1
Q ss_pred CCcccccc---cccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhh
Q 019128 15 LEETPVSK---VMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 90 (346)
Q Consensus 15 ~~~~~v~d---im~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~ 90 (346)
+.+.++++ +|.++++++++++++.+|++.|.+++++.+||+| +|+++|+++..|+++......
T Consensus 5 ~~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~------------- 71 (144)
T 2nyc_A 5 FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI------------- 71 (144)
T ss_dssp GGGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC--------------
T ss_pred hhhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccc-------------
Confidence 44567888 8889999999999999999999999999999999 799999999999976532100
Q ss_pred hhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCC----CceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEE
Q 019128 91 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRG 165 (346)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~G 165 (346)
......++.++|.+. .++.++++++++.++++.|.+++.+++||++ +|+++|
T Consensus 72 -----------------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~G 128 (144)
T 2nyc_A 72 -----------------------YNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVG 128 (144)
T ss_dssp --------------------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred -----------------------cccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEE
Confidence 001133466666532 1588999999999999999999999999999 799999
Q ss_pred EeeHHHHHHHHH
Q 019128 166 ILTSKDILMRVI 177 (346)
Q Consensus 166 iit~~dll~~~~ 177 (346)
+||..|+++.+.
T Consensus 129 iit~~dil~~l~ 140 (144)
T 2nyc_A 129 VLTLSDILKYIL 140 (144)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999984443
No 89
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.71 E-value=1.1e-16 Score=136.09 Aligned_cols=117 Identities=17% Similarity=0.205 Sum_probs=105.7
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCe
Q 019128 119 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 197 (346)
Q Consensus 119 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 197 (346)
.++.++|.+ +++++.+++++.+|+++|.+++++++||+| +++++|++|.+|+. +.. ...+++++|+++++
T Consensus 13 ~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~-~~~------~~~~v~~im~~~~~ 83 (213)
T 1vr9_A 13 MKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLL-DLD------LDSSVFNKVSLPDF 83 (213)
T ss_dssp CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGT-TSC------TTSBSGGGCBCTTC
T ss_pred cCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHH-hhc------CCCcHHHHccCCCE
Confidence 457788874 789999999999999999999999999999 89999999999996 322 14689999999999
Q ss_pred eecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 198 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 198 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
++++++++.++++.|.+++++++||+|++|+++|+||..|+++....
T Consensus 84 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 84 FVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp CEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 99999999999999999999999999988999999999999987554
No 90
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.71 E-value=8.8e-17 Score=142.29 Aligned_cols=120 Identities=22% Similarity=0.290 Sum_probs=107.0
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCcccccccc
Q 019128 117 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 190 (346)
Q Consensus 117 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~ 190 (346)
...+++++|++ +++++++++++.++++.|.++ +++++||++ +|+++|+||.+|++ .. ....++.+
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~~------~~~~~v~~ 203 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVAE 203 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHH-HS------CTTCBSTT
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHh-cC------CCCCcHHH
Confidence 45679999985 899999999999999999987 789999999 89999999999997 32 12578999
Q ss_pred ccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHH
Q 019128 191 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 245 (346)
Q Consensus 191 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~ 245 (346)
+|.++++++++++++.++++.|.+++.+.+||||++|+++|+||..|+++.+.+.
T Consensus 204 im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e 258 (278)
T 2yvy_A 204 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 258 (278)
T ss_dssp TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC---
T ss_pred HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875543
No 91
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.71 E-value=2.9e-17 Score=132.48 Aligned_cols=127 Identities=18% Similarity=0.225 Sum_probs=105.1
Q ss_pred CCCccccccccc--CCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhh
Q 019128 14 NLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 90 (346)
Q Consensus 14 ~~~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~ 90 (346)
.+...+++++|+ ++++++++++|+.+|++.|.+++++++||+| +|+++|+||..|+++.......
T Consensus 11 ~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~------------ 78 (156)
T 3ctu_A 11 TFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDL------------ 78 (156)
T ss_dssp HHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccc------------
Confidence 455678999999 7899999999999999999999999999998 7999999999999876432100
Q ss_pred hhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeH
Q 019128 91 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 169 (346)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~ 169 (346)
........+++++|.+ +++++.+++++.++++.|.+++ ++||++ +|+++|+||.
T Consensus 79 ---------------------~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~ 133 (156)
T 3ctu_A 79 ---------------------SQEIMADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITR 133 (156)
T ss_dssp ---------------------CHHHHTTSBGGGGCBC--SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEET
T ss_pred ---------------------cccccccCcHHHhccC--CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEH
Confidence 0011235678999974 7889999999999999999886 799999 8999999999
Q ss_pred HHHHHHHHh
Q 019128 170 KDILMRVIS 178 (346)
Q Consensus 170 ~dll~~~~~ 178 (346)
+|++ +.+.
T Consensus 134 ~dil-~~l~ 141 (156)
T 3ctu_A 134 KSIL-KAVN 141 (156)
T ss_dssp THHH-HHHH
T ss_pred HHHH-HHHH
Confidence 9998 4443
No 92
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.70 E-value=2.4e-17 Score=136.13 Aligned_cols=149 Identities=17% Similarity=0.202 Sum_probs=107.4
Q ss_pred cccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhh
Q 019128 17 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 93 (346)
Q Consensus 17 ~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
.++|+++|++ +++++++++|+.+|+++|.+++++++||+| +|+++|+||..|+++........... . .
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~--~-------~ 73 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQND--T-------N 73 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC---------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCc--c-------c
Confidence 4689999998 899999999999999999999999999999 79999999999997532110000000 0 0
Q ss_pred hhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHH
Q 019128 94 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 172 (346)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dl 172 (346)
+....+...... .............+++++|.+ +++++++++++.++++.|.+++++++||++ +|+++|+||.+|+
T Consensus 74 ~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~di 150 (180)
T 3sl7_A 74 LFPDVDSTWKTF-NELQKLISKTYGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNV 150 (180)
T ss_dssp -------CCCSH-HHHHHHHHTTTTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHH
T ss_pred ccccccchhhhh-HHHHHHHhccccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHH
Confidence 000000000111 111122222345678999985 678899999999999999999999999999 8999999999999
Q ss_pred HHHHH
Q 019128 173 LMRVI 177 (346)
Q Consensus 173 l~~~~ 177 (346)
++.+.
T Consensus 151 l~~~~ 155 (180)
T 3sl7_A 151 VRAAL 155 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 84443
No 93
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.70 E-value=1.1e-16 Score=142.24 Aligned_cols=121 Identities=21% Similarity=0.283 Sum_probs=108.6
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCcccccccc
Q 019128 117 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 190 (346)
Q Consensus 117 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~ 190 (346)
...+++++|++ +++++++++++.++++.|.++ +++++||+| +|+++|+||.+|++ .. ....++.+
T Consensus 135 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll-~~------~~~~~v~~ 205 (286)
T 2oux_A 135 EDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLI-VN------DDDTLIAD 205 (286)
T ss_dssp CTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHT-TS------CTTSBHHH
T ss_pred ChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHH-cC------CCCCcHHH
Confidence 35578999985 799999999999999999998 788999999 89999999999997 21 12578999
Q ss_pred ccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHHc
Q 019128 191 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 191 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~i 246 (346)
+|.++++++++++++.++++.|.+++++++||||++|+++|+||..|+++.+....
T Consensus 206 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 206 ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999765543
No 94
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.70 E-value=1e-16 Score=132.99 Aligned_cols=119 Identities=20% Similarity=0.202 Sum_probs=103.5
Q ss_pred cccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhh
Q 019128 17 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 95 (346)
Q Consensus 17 ~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (346)
.++|+++|+++++++++++|+.+|+++|.+++++++||+| +|+++|++|..|+++.....
T Consensus 8 ~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~------------------- 68 (184)
T 1pvm_A 8 FMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPR------------------- 68 (184)
T ss_dssp CCBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGG-------------------
T ss_pred ccCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc-------------------
Confidence 4899999999999999999999999999999999999998 79999999999997642100
Q ss_pred hccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHH
Q 019128 96 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 173 (346)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll 173 (346)
.......+++++|.+ +++++++++++.++++.|.+++.+.+||+| +|+++|+||..|++
T Consensus 69 -----------------~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll 128 (184)
T 1pvm_A 69 -----------------NKKPDEVPIRLVMRK--PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLS 128 (184)
T ss_dssp -----------------CCCGGGSBGGGTSBS--SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHT
T ss_pred -----------------ccCcccCCHHHHhCC--CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHH
Confidence 000123468889974 788999999999999999999999999999 59999999999997
No 95
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.69 E-value=1.3e-16 Score=128.17 Aligned_cols=126 Identities=22% Similarity=0.314 Sum_probs=103.6
Q ss_pred CCCCcccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhh
Q 019128 13 LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 91 (346)
Q Consensus 13 ~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~ 91 (346)
..+..++|+++ ++++++++++++.+|++.|.+++++.+||+| +|+++|+||..|+++.....
T Consensus 18 ~~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~--------------- 80 (152)
T 2uv4_A 18 KSLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEK--------------- 80 (152)
T ss_dssp SBHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCS---------------
T ss_pred hhHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcch---------------
Confidence 35677889998 7899999999999999999999999999999 79999999999997642100
Q ss_pred hhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCC----CceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEE
Q 019128 92 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGI 166 (346)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Gi 166 (346)
.. .....++.++|.++ .+++++.+++++.++++.|.+++.+++||+| +|+++|+
T Consensus 81 ---------~~------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGi 139 (152)
T 2uv4_A 81 ---------TY------------NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGI 139 (152)
T ss_dssp ---------SC------------CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred ---------hh------------hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEE
Confidence 00 00123567777521 3688999999999999999999999999999 6999999
Q ss_pred eeHHHHHHHHH
Q 019128 167 LTSKDILMRVI 177 (346)
Q Consensus 167 it~~dll~~~~ 177 (346)
||..|++ +.+
T Consensus 140 it~~dil-~~l 149 (152)
T 2uv4_A 140 VSLSDIL-QAL 149 (152)
T ss_dssp EEHHHHH-HHH
T ss_pred EEHHHHH-HHH
Confidence 9999998 443
No 96
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.68 E-value=8.9e-17 Score=130.07 Aligned_cols=127 Identities=15% Similarity=0.220 Sum_probs=104.0
Q ss_pred CCCcccccccccC--CCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhh
Q 019128 14 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 90 (346)
Q Consensus 14 ~~~~~~v~dim~~--~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~ 90 (346)
.+...+|+++|.+ +++++++++++.+|++.|.+++++++||+| +|+++|+||..|+++.....
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~-------------- 75 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGL-------------- 75 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCS--------------
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhh--------------
Confidence 5778999999998 899999999999999999999999999999 78999999999997652100
Q ss_pred hhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeH
Q 019128 91 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 169 (346)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~ 169 (346)
... . .......++.++|.+ +++++.+++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 76 ---------~~~-~--------~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 76 ---------ERI-E--------FEKLDQITVEEVMLT--DIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTR 133 (159)
T ss_dssp ---------SSB-C--------GGGTTTSBHHHHSBC--SCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEH
T ss_pred ---------ccc-c--------hhhhccCCHHHhcCC--CCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEH
Confidence 000 0 001234567888874 78899999999999999999876 99999 8999999999
Q ss_pred HHHHHHH
Q 019128 170 KDILMRV 176 (346)
Q Consensus 170 ~dll~~~ 176 (346)
+|++..+
T Consensus 134 ~dil~~~ 140 (159)
T 1yav_A 134 RVVLKEL 140 (159)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998433
No 97
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.68 E-value=1.3e-16 Score=141.60 Aligned_cols=121 Identities=15% Similarity=0.233 Sum_probs=106.2
Q ss_pred hhcCCCCcccccccccCCCeeecCCccHHHHHHHHHhC-----Ccceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhh
Q 019128 10 ARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEK 83 (346)
Q Consensus 10 ~~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~-----~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~ 83 (346)
..-..+...+|+++|+++++++++++|+.+|++.|.++ +++++||+| +|+++|+||.+|++..
T Consensus 129 ~~ll~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~----------- 197 (286)
T 2oux_A 129 KELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN----------- 197 (286)
T ss_dssp HHHTTSCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS-----------
T ss_pred HHHhcCChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC-----------
Confidence 33447788999999999999999999999999999987 788999999 7999999999998642
Q ss_pred hhhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCE
Q 019128 84 GKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK 162 (346)
Q Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~ 162 (346)
....+++++|.+ +++++++++++.++++.|.+++.+++||+| +|+
T Consensus 198 --------------------------------~~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~ 243 (286)
T 2oux_A 198 --------------------------------DDDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDH 243 (286)
T ss_dssp --------------------------------CTTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCB
T ss_pred --------------------------------CCCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCe
Confidence 123457788864 688999999999999999999999999999 899
Q ss_pred EEEEeeHHHHHHH
Q 019128 163 PRGILTSKDILMR 175 (346)
Q Consensus 163 ~~Giit~~dll~~ 175 (346)
++|+||..|++..
T Consensus 244 lvGiIT~~Dil~~ 256 (286)
T 2oux_A 244 LLGIVTVDDIIDV 256 (286)
T ss_dssp EEEEEEHHHHHHH
T ss_pred EEEEEEHHHHHHH
Confidence 9999999999843
No 98
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.66 E-value=3.2e-16 Score=138.69 Aligned_cols=120 Identities=21% Similarity=0.244 Sum_probs=106.2
Q ss_pred cCCCCcccccccccCCCeeecCCccHHHHHHHHHhC-----Ccceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhh
Q 019128 12 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGK 85 (346)
Q Consensus 12 ~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~-----~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~ 85 (346)
...+...+++++|+++++++++++++.+|++.|.++ ++.++||+| +|+++|+||.+|++..
T Consensus 129 ~l~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~------------- 195 (278)
T 2yvy_A 129 LARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA------------- 195 (278)
T ss_dssp HHHSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS-------------
T ss_pred HHCCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC-------------
Confidence 336678899999999999999999999999999986 789999999 7999999999998642
Q ss_pred hHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEE
Q 019128 86 AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPR 164 (346)
Q Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~ 164 (346)
....+++++|.+ +++++++++++.++++.|.+++.+.+||+| +|+++
T Consensus 196 ------------------------------~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lv 243 (278)
T 2yvy_A 196 ------------------------------DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLV 243 (278)
T ss_dssp ------------------------------CTTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEE
T ss_pred ------------------------------CCCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEE
Confidence 123568899964 688999999999999999999999999999 89999
Q ss_pred EEeeHHHHHHHHH
Q 019128 165 GILTSKDILMRVI 177 (346)
Q Consensus 165 Giit~~dll~~~~ 177 (346)
|+||..|++ ..+
T Consensus 244 GivT~~Dil-~~i 255 (278)
T 2yvy_A 244 GIVTVDDVL-DVL 255 (278)
T ss_dssp EEEEHHHHH-HHC
T ss_pred EEEEHHHHH-HHH
Confidence 999999998 443
No 99
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.66 E-value=4.5e-16 Score=134.71 Aligned_cols=125 Identities=15% Similarity=0.101 Sum_probs=103.1
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeC---CEEEEEeeHHHHHHHHHhc----CC---C----
Q 019128 117 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE---NKPRGILTSKDILMRVISQ----NL---P---- 182 (346)
Q Consensus 117 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~---~~~~Giit~~dll~~~~~~----~~---~---- 182 (346)
...+++++|+. +++++.+++++.+|.++|.+++++++||+++ ++++|+||.+|++..+... .. .
T Consensus 11 ~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 11 YNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 34578999984 8999999999999999999999999999983 5899999999998322211 00 0
Q ss_pred ----------------------c---------------------------------------------------------
Q 019128 183 ----------------------A--------------------------------------------------------- 183 (346)
Q Consensus 183 ----------------------~--------------------------------------------------------- 183 (346)
.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0
Q ss_pred ---------------ccccc--c-cccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 184 ---------------DSTLV--E-KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 184 ---------------~~~~v--~-~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
...++ . .+|.+.|+++.+++++.++..+|...+++++||++ .|+++||||++||++++.+
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 01222 2 36889999999999999999999999999999998 7999999999999998654
No 100
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.64 E-value=1.6e-15 Score=143.48 Aligned_cols=119 Identities=22% Similarity=0.293 Sum_probs=107.5
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCcccccccc
Q 019128 117 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 190 (346)
Q Consensus 117 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~ 190 (346)
...+++++|++ ++++++++.++.++++.|.++ +++++||+| +++++|++|.+|++ .. ....++++
T Consensus 153 ~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll-~~------~~~~~v~d 223 (473)
T 2zy9_A 153 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVAE 223 (473)
T ss_dssp CTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHH-HS------CTTSBGGG
T ss_pred CCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHh-cC------CCCCcHHH
Confidence 45678999985 899999999999999999986 478999999 78999999999997 31 12578999
Q ss_pred ccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 191 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 191 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
+|+++++++++++++.++++.|.+++.+.+||||++|+++|+||..|+++.+.+
T Consensus 224 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 224 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999987654
No 101
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.63 E-value=9.6e-17 Score=157.27 Aligned_cols=122 Identities=11% Similarity=0.013 Sum_probs=103.9
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHH-HcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCC-------------
Q 019128 118 RPSLSTIIPEKSKVVTISPTDTVLMATKKML-ELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP------------- 182 (346)
Q Consensus 118 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~-~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~------------- 182 (346)
..+++++|+|++++.++++++++.++.+.|. +++++++||+| +++++|+||.+|++ +.+.....
T Consensus 452 ~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~-~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 452 EMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIV-DRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHT-TTTTTC---------------
T ss_pred cCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHH-HHHHHHhhhccccccccccee
Confidence 4568999998789999999999999999999 79999999999 79999999999997 43322110
Q ss_pred ----------------------------------ccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCc
Q 019128 183 ----------------------------------ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 228 (346)
Q Consensus 183 ----------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~ 228 (346)
....+++++|+++++++++++++.++++.|.+++++++||+ ++|+
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~ 609 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGK 609 (632)
T ss_dssp ----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTE
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCE
Confidence 00113788999999999999999999999999999999999 6899
Q ss_pred EEEEEehHHHHHH
Q 019128 229 VVDVVDVIHITHA 241 (346)
Q Consensus 229 ~~Giit~~Di~~~ 241 (346)
++|+||++|++++
T Consensus 610 lvGIVT~~Dll~~ 622 (632)
T 3org_A 610 LVGIVEREDVAYG 622 (632)
T ss_dssp EEEEEEGGGTEEC
T ss_pred EEEEEehhhHHHH
Confidence 9999999999875
No 102
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.63 E-value=8.1e-16 Score=147.91 Aligned_cols=124 Identities=10% Similarity=0.079 Sum_probs=108.0
Q ss_pred CCCccccccCCCceeEeCCC-CcHHHHHHHHHHcCCcEEEEEe--CCEEEEEeeHHHHHHHHHhcCCCcccccccccccc
Q 019128 118 RPSLSTIIPEKSKVVTISPT-DTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 194 (346)
Q Consensus 118 ~~~v~~im~~~~~~~~v~~~-~~l~~~~~~m~~~~~~~l~V~d--~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~ 194 (346)
..+++++|++ +++++.++ +++.+++++|.+++++++||+| +++++|+||.+|+++.+... ......+++++|++
T Consensus 383 ~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~-~~~~~~~V~~im~~ 459 (527)
T 3pc3_A 383 SLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM-NRQQSDPAIKALNK 459 (527)
T ss_dssp TSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH-CCCTTSBGGGGEET
T ss_pred CCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc-cCcCCCcHHHHhcC
Confidence 4679999984 78999999 9999999999999999999999 78999999999998555443 22336799999999
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCceeEEEcCC----CcEEEEEehHHHHHHHHHHc
Q 019128 195 NPECATIDTPIVDALHIMHDGKFLHLPVVDRD----GDVVDVVDVIHITHAAVATV 246 (346)
Q Consensus 195 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~----g~~~Giit~~Di~~~~~~~i 246 (346)
+++++++++++.++++.|.++++ +||||++ |+++||||..||++++....
T Consensus 460 ~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 460 RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 99999999999999999977765 7999984 99999999999999866543
No 103
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.60 E-value=3.8e-15 Score=141.01 Aligned_cols=122 Identities=20% Similarity=0.217 Sum_probs=107.2
Q ss_pred HhhcCCCCcccccccccCCCeeecCCccHHHHHHHHHhC-----Ccceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHh
Q 019128 9 IARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAE 82 (346)
Q Consensus 9 ~~~~~~~~~~~v~dim~~~~i~v~~~~~l~ea~~~m~~~-----~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~ 82 (346)
+.+...+.+.+++++|+++++++++++|+.+|++.|.++ +++++||+| +++++|++|.+|++..
T Consensus 146 i~~~l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~---------- 215 (473)
T 2zy9_A 146 VEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA---------- 215 (473)
T ss_dssp HHHHHTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS----------
T ss_pred HHHHhcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC----------
Confidence 334447788999999999999999999999999999986 589999999 7999999999998642
Q ss_pred hhhhHhhhhhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CC
Q 019128 83 KGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN 161 (346)
Q Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~ 161 (346)
....+++++|.+ +++++++++++.++++.|.+++...+||+| +|
T Consensus 216 ---------------------------------~~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g 260 (473)
T 2zy9_A 216 ---------------------------------DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEG 260 (473)
T ss_dssp ---------------------------------CTTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred ---------------------------------CCCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCC
Confidence 123568899974 789999999999999999999999999999 89
Q ss_pred EEEEEeeHHHHHHH
Q 019128 162 KPRGILTSKDILMR 175 (346)
Q Consensus 162 ~~~Giit~~dll~~ 175 (346)
+++|+||.+|++..
T Consensus 261 ~lvGiIT~~Dil~~ 274 (473)
T 2zy9_A 261 RLVGIVTVDDVLDV 274 (473)
T ss_dssp BEEEEEEHHHHHHH
T ss_pred EEEEEEehHhhHHH
Confidence 99999999999843
No 104
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.59 E-value=2.1e-15 Score=145.09 Aligned_cols=124 Identities=13% Similarity=0.210 Sum_probs=104.9
Q ss_pred CCCcccccccccCCCeeecCC-ccHHHHHHHHHhCCcceeeeee--CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhh
Q 019128 14 NLEETPVSKVMTRNPTFVLSD-TLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 90 (346)
Q Consensus 14 ~~~~~~v~dim~~~~i~v~~~-~~l~ea~~~m~~~~~~~lpVvd--~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~ 90 (346)
.+...+|+++|++++++++++ +|+.+|+++|.+++++++||+| +++++|+||.+||++.+...
T Consensus 380 ~l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~-------------- 445 (527)
T 3pc3_A 380 WWWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM-------------- 445 (527)
T ss_dssp TTTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH--------------
T ss_pred cccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc--------------
Confidence 355789999999999999999 9999999999999999999999 68999999999998764321
Q ss_pred hhhhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeC-----CEEEE
Q 019128 91 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-----NKPRG 165 (346)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~-----~~~~G 165 (346)
......++.++|.+ +++++++++++.+++++|.++++ +||+|+ |+++|
T Consensus 446 -----------------------~~~~~~~V~~im~~--~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvG 498 (527)
T 3pc3_A 446 -----------------------NRQQSDPAIKALNK--RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKA 498 (527)
T ss_dssp -----------------------CCCTTSBGGGGEET--TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEE
T ss_pred -----------------------cCcCCCcHHHHhcC--CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEE
Confidence 01224568999974 78999999999999999977664 799984 89999
Q ss_pred EeeHHHHHHHHHhc
Q 019128 166 ILTSKDILMRVISQ 179 (346)
Q Consensus 166 iit~~dll~~~~~~ 179 (346)
|||..|++ +.+.+
T Consensus 499 IVT~~Dll-~~l~~ 511 (527)
T 3pc3_A 499 LATKLDVT-TFIAA 511 (527)
T ss_dssp EEEHHHHH-HHHHT
T ss_pred EEEHHHHH-HHHHh
Confidence 99999999 55544
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.58 E-value=1e-14 Score=138.88 Aligned_cols=115 Identities=24% Similarity=0.303 Sum_probs=103.2
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe---CCEEEEEeeHHHHHHHHHhcCCCcccccccccccc-CC
Q 019128 121 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NP 196 (346)
Q Consensus 121 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d---~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~-~~ 196 (346)
..+.|.+ +++++++++++.+++++|.+++++++||++ +++++|+||.+|+. . ......++.++|++ ++
T Consensus 115 ~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~-~-----~~~~~~~V~~vM~~~~~ 186 (511)
T 3usb_A 115 SESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR-F-----IQDYSIKISDVMTKEQL 186 (511)
T ss_dssp SSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHT-T-----CCCSSSBHHHHCCCCCC
T ss_pred ccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhh-h-----hccCCCcHHHhcccCCC
Confidence 4466664 788999999999999999999999999998 57999999999995 2 12236789999997 99
Q ss_pred eeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHH
Q 019128 197 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 243 (346)
Q Consensus 197 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~ 243 (346)
+++++++++.++++.|.+++++.+||||++|+++|+||.+|+++.+.
T Consensus 187 vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 187 ITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp CCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999864
No 106
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.57 E-value=5.6e-17 Score=150.42 Aligned_cols=146 Identities=22% Similarity=0.238 Sum_probs=14.5
Q ss_pred hhhhhHhhhhhhhhhccCCCCCChh-hHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-
Q 019128 82 EKGKAIAAAVEGVEKHWGTSISGPN-TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV- 159 (346)
Q Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d- 159 (346)
+..++++.+..+ |.++++.+ +..++..+.-.-..-...|. .+++++.|+.++.+++++|.+++++.+||++
T Consensus 105 e~~MAIamAr~G-----GiGvIH~n~sie~Qa~~V~~VKr~e~g~i--~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~ 177 (556)
T 4af0_A 105 EDRMAIALALHG-----GLGIIHHNCSAEEQAAMVRRVKKYENGFI--TDPLCLGPDATVGDVLEIKAKFGFCGVPITET 177 (556)
T ss_dssp SHHHHHHHHHTT-----CEEEECCSSCHHHHHHHHHHHHHCCC-------------------------------------
T ss_pred CHHHHHHHHHCC-----CeEEEcCCCCHHHHHHHHHHHHhcccCcc--CCCeEcCCCCCHHHHHHHHHHhCCCccccccc
Confidence 334445555555 66666654 22333222111011122333 3689999999999999999999999999998
Q ss_pred ---CCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehH
Q 019128 160 ---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVI 236 (346)
Q Consensus 160 ---~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~ 236 (346)
+++++||||.+|+. +. + ...+++++|+++++++++..++.+|.++|.++++..+||||++|+++|+||++
T Consensus 178 g~~~~kLvGIvT~RD~r--f~----d-~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~k 250 (556)
T 4af0_A 178 GEPDSKLLGIVTGRDVQ--FQ----D-AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARS 250 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcCCEEEEEEeccccc--cc----c-cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEec
Confidence 46899999999983 31 1 26799999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 019128 237 HITHA 241 (346)
Q Consensus 237 Di~~~ 241 (346)
|+.+.
T Consensus 251 Di~k~ 255 (556)
T 4af0_A 251 DLLKN 255 (556)
T ss_dssp -----
T ss_pred hhhhh
Confidence 99986
No 107
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.56 E-value=4.2e-16 Score=147.89 Aligned_cols=114 Identities=17% Similarity=0.178 Sum_probs=89.7
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCccccccccccc-c-CC
Q 019128 120 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NP 196 (346)
Q Consensus 120 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~-~-~~ 196 (346)
+..++|. .+++++++++++.+++++|.+++++++||++ +++++|+||.+|+. . ......++.++|+ + ++
T Consensus 90 ~~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~-~-----~~~~~~~v~diM~p~~~~ 161 (496)
T 4fxs_A 90 IFEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR-F-----VTDLTKSVAAVMTPKERL 161 (496)
T ss_dssp HCCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT-T-----CCCTTSBGGGTSEEGGGC
T ss_pred ccccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh-h-----cccCCCcHHHHhcCCCCC
Confidence 3567787 4789999999999999999999999999999 89999999999995 1 1123678999998 4 69
Q ss_pred eeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHH
Q 019128 197 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 241 (346)
Q Consensus 197 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~ 241 (346)
+++++++++.++++.|.+++++.+||||++|+++|+||++|+++.
T Consensus 162 vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 162 ATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 206 (496)
T ss_dssp CEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHh
Confidence 999999999999999999999999999999999999999999986
No 108
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.55 E-value=1.7e-14 Score=137.30 Aligned_cols=160 Identities=13% Similarity=0.186 Sum_probs=124.5
Q ss_pred cccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee---CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhh
Q 019128 19 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 95 (346)
Q Consensus 19 ~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd---~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (346)
+.+++|..+++++++++|+.+|+++|.+++++++||+| +++++|+||.+|+...
T Consensus 114 ~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~----------------------- 170 (511)
T 3usb_A 114 RSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI----------------------- 170 (511)
T ss_dssp TSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC-----------------------
T ss_pred ccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh-----------------------
Confidence 45677888999999999999999999999999999998 5799999999998420
Q ss_pred hccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHH
Q 019128 96 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 174 (346)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~ 174 (346)
.....+++++|++ .+++++++++++.+++++|.+++++.+||+| +|+++|+||.+|++
T Consensus 171 -------------------~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil- 229 (511)
T 3usb_A 171 -------------------QDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIE- 229 (511)
T ss_dssp -------------------CCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHH-
T ss_pred -------------------ccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHH-
Confidence 0123457888874 4789999999999999999999999999999 89999999999998
Q ss_pred HHHhcCCCccccccccccccCCe--eecCCCCHHHHHHHhHhCCCceeEEEcCCC
Q 019128 175 RVISQNLPADSTLVEKVMTPNPE--CATIDTPIVDALHIMHDGKFLHLPVVDRDG 227 (346)
Q Consensus 175 ~~~~~~~~~~~~~v~~~m~~~~~--~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g 227 (346)
+.+... ....+.+.+..+ .+.......+.++.+.+.+...+.|-..+|
T Consensus 230 ~~~~~p-----~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 230 KVIEFP-----NSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp HHHHCT-----TCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred Hhhhcc-----cchhhhccceeeeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 444431 123344433333 333344556667778888998887765554
No 109
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.54 E-value=5.9e-16 Score=147.54 Aligned_cols=168 Identities=14% Similarity=0.085 Sum_probs=26.4
Q ss_pred cccccc-ccCCCeeecCCccHHHHHHHHHhCCcceeeeee-C---CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhh
Q 019128 18 TPVSKV-MTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N---GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 92 (346)
Q Consensus 18 ~~v~di-m~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~---~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~ 92 (346)
.+..++ |+++++++++++|+.+|+++|.+++++++||+| + ++++|+||.+|+... .
T Consensus 96 V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~----------------- 156 (503)
T 1me8_A 96 VKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L----------------- 156 (503)
T ss_dssp HHTTTC--------------------------------------------------------------------------
T ss_pred hhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h-----------------
Confidence 344555 999999999999999999999999999999998 5 899999999998642 0
Q ss_pred hhhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHH
Q 019128 93 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 171 (346)
Q Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~d 171 (346)
.....+++++|++..+++++++++++.+++++|.+++++.+||+| +|+++|+||.+|
T Consensus 157 ----------------------~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~D 214 (503)
T 1me8_A 157 ----------------------TQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKD 214 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------ccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecH
Confidence 012345888898634499999999999999999999999999999 899999999999
Q ss_pred HHHHHHhcCCCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEE
Q 019128 172 ILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVD 231 (346)
Q Consensus 172 ll~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~G 231 (346)
+++.+. ..... ..+...++. ...++. ....+.++.|.+.+.+.++|--.+|...|
T Consensus 215 il~~~~-~~~~~-~d~~~~l~v--~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~ 269 (503)
T 1me8_A 215 YDRSQV-CHNEL-VDSQKRYLV--GAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEW 269 (503)
T ss_dssp --------CCCC-BCTTSCBCC--EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHH
T ss_pred HHHhhh-cccch-hcccccccc--ccccCc-hhHHHHHHHHHhhhccceEEecccCcccc
Confidence 984433 32211 112222321 123344 56667788888888887655333344333
No 110
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.53 E-value=1.1e-14 Score=142.75 Aligned_cols=156 Identities=13% Similarity=0.076 Sum_probs=102.9
Q ss_pred Cccccccccc--CCCeeecCCccHHHHHHHHH-hCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhh--hHhh
Q 019128 16 EETPVSKVMT--RNPTFVLSDTLAVEALQKMV-QGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGK--AIAA 89 (346)
Q Consensus 16 ~~~~v~dim~--~~~i~v~~~~~l~ea~~~m~-~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~--~~~~ 89 (346)
++++|+|+|+ ++++++++++|+.|+.+.|. +++++++||+| +++++|+||.+|+.+.............. ....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 6789999999 89999999999999999999 89999999999 79999999999998754321110000000 0000
Q ss_pred hh--hhhhhccCCCCCC-----hhhHHHHHHH-HhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCC
Q 019128 90 AV--EGVEKHWGTSISG-----PNTFIETLRE-RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN 161 (346)
Q Consensus 90 ~~--~~~~~~~g~~~~~-----~~~~~~~~~~-~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~ 161 (346)
.. ..+.+........ .....+.... .-...++.++|++ +++++++++++.++++.|.+++++++||+++|
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVve~G 608 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVTERG 608 (632)
T ss_dssp ----------------------------------------CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEEETT
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEEECC
Confidence 00 0000000000000 0000000000 0111247899985 78899999999999999999999999999999
Q ss_pred EEEEEeeHHHHH
Q 019128 162 KPRGILTSKDIL 173 (346)
Q Consensus 162 ~~~Giit~~dll 173 (346)
+++|+||.+|++
T Consensus 609 ~lvGIVT~~Dll 620 (632)
T 3org_A 609 KLVGIVEREDVA 620 (632)
T ss_dssp EEEEEEEGGGTE
T ss_pred EEEEEEehhhHH
Confidence 999999999997
No 111
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.50 E-value=1.5e-13 Score=131.19 Aligned_cols=115 Identities=21% Similarity=0.302 Sum_probs=104.3
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe---CCEEEEEeeHHHHHHHHHhcCCCcccccccccccc-CC
Q 019128 121 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NP 196 (346)
Q Consensus 121 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d---~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~-~~ 196 (346)
+.++|.+ +++++++++++.++++.|.+++++++||++ +++++|+||.+|++ .. . ....+++++|++ ++
T Consensus 92 ~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~-~~--~---~~~~~v~~im~~~~~ 163 (491)
T 1zfj_A 92 SENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR-FI--S---DYNAPISEHMTSEHL 163 (491)
T ss_dssp HTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHH-HC--S---CSSSBTTTSCCCSCC
T ss_pred HHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHh-hh--c---cCCCcHHHHcCCCCC
Confidence 4678875 788999999999999999999999999997 68999999999997 32 1 136789999988 89
Q ss_pred eeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHH
Q 019128 197 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 243 (346)
Q Consensus 197 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~ 243 (346)
+++++++++.++++.|.+++++.+||||++|+++|+||..|+++.+.
T Consensus 164 ~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 164 VTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp CCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999865
No 112
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.49 E-value=9.3e-14 Score=95.50 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=63.2
Q ss_pred eeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCeee
Q 019128 131 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 199 (346)
Q Consensus 131 ~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 199 (346)
++++.|++++.+|+++|.+++++++||+++|+++||+|.+|+++++.+.+.+....+++++|+++++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 689999999999999999999999999999999999999999877777777766789999999998774
No 113
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.48 E-value=3.1e-15 Score=141.84 Aligned_cols=114 Identities=21% Similarity=0.225 Sum_probs=2.0
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCccccccccccc-c-CCee
Q 019128 121 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NPEC 198 (346)
Q Consensus 121 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~-~-~~~~ 198 (346)
+.++|.+ +++++++++++.+++++|.+++++++||+++++++|+||.+|+. ... ....++.++|+ + ++++
T Consensus 90 ~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~-~~~-----~~~~~V~~vMtp~~~~vt 161 (490)
T 4avf_A 90 HETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLR-VKP-----NAGDTVAAIMTPKDKLVT 161 (490)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhh-hcc-----ccCCcHHHHhccCCCCEE
Confidence 5677874 78899999999999999999999999999999999999999995 221 12578999998 4 7999
Q ss_pred ecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 199 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 199 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
+++++++.++++.|.+++++.+||||++|+++|+||++|+++..
T Consensus 162 v~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 162 AREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp --------------------------------------------
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc
Confidence 99999999999999999999999999999999999999999873
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.48 E-value=3.3e-15 Score=142.41 Aligned_cols=114 Identities=21% Similarity=0.186 Sum_probs=0.4
Q ss_pred ccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-C---CEEEEEeeHHHHHHHHHhcCCCccccccccccccC--Cee
Q 019128 125 IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E---NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN--PEC 198 (346)
Q Consensus 125 m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~---~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~--~~~ 198 (346)
|.+ +++++++++++.+++++|.+++++++||++ + ++++|+||.+|++ +. . .....+++++|+++ +++
T Consensus 103 M~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~-~~-~---~~~~~~V~diM~~~~~~~t 175 (503)
T 1me8_A 103 FVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYP-ID-L---TQTETKVSDMMTPFSKLVT 175 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHH-hh-h---ccccCcHHHHhCCCCCCEE
Confidence 764 789999999999999999999999999999 5 7999999999996 32 1 12357899999887 999
Q ss_pred ecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHHH
Q 019128 199 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 245 (346)
Q Consensus 199 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~~ 245 (346)
+++++++.++++.|.+++++.+||||++|+++|+||.+||++.....
T Consensus 176 v~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 176 AHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp ----------------------------------------------C
T ss_pred EcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcc
Confidence 99999999999999999999999999999999999999999986543
No 115
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.44 E-value=4.6e-14 Score=133.76 Aligned_cols=117 Identities=24% Similarity=0.301 Sum_probs=3.4
Q ss_pred ccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhhc
Q 019128 18 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 97 (346)
Q Consensus 18 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (346)
.+++++|..+++++++++|+.+|+++|.+++++.+||+|+++++|+||.+|+....
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~------------------------ 143 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKP------------------------ 143 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhcc------------------------
Confidence 45788999999999999999999999999999999999999999999999984210
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHH
Q 019128 98 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRV 176 (346)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~ 176 (346)
....+++++|+|+.+++++++++++.+++++|.+++++.+||+| +|+++|+||.+|++ +.
T Consensus 144 ------------------~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil-~~ 204 (490)
T 4avf_A 144 ------------------NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIE-KA 204 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhh-hh
Confidence 11245788888533689999999999999999999999999999 89999999999998 44
Q ss_pred H
Q 019128 177 I 177 (346)
Q Consensus 177 ~ 177 (346)
.
T Consensus 205 ~ 205 (490)
T 4avf_A 205 K 205 (490)
T ss_dssp -
T ss_pred c
Confidence 3
No 116
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.43 E-value=7e-14 Score=132.63 Aligned_cols=114 Identities=18% Similarity=0.282 Sum_probs=89.5
Q ss_pred ccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhh
Q 019128 18 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 96 (346)
Q Consensus 18 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (346)
.+++++|+.+++++++++|+.+|+++|.+++++++||+| +++++|+||.+|+...
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~------------------------ 144 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV------------------------ 144 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC------------------------
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc------------------------
Confidence 356788999999999999999999999999999999999 7999999999998421
Q ss_pred ccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHH
Q 019128 97 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 173 (346)
Q Consensus 97 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll 173 (346)
.....++.++|+|..+++++++++++.+++++|.++++..+||+| +|+++|+||.+|++
T Consensus 145 ------------------~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl 204 (496)
T 4fxs_A 145 ------------------TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFH 204 (496)
T ss_dssp ------------------CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC---
T ss_pred ------------------ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHH
Confidence 012356899998534589999999999999999999999999999 89999999999998
No 117
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.42 E-value=1.5e-14 Score=138.15 Aligned_cols=116 Identities=25% Similarity=0.328 Sum_probs=5.7
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHhcCCCcccccccccccc--CCe
Q 019128 121 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPE 197 (346)
Q Consensus 121 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~--~~~ 197 (346)
+.++|.+ +++++.+++++.++++.|.+++++.+||+| +++++|+||.+|+. +. . ....++.++|++ ++.
T Consensus 97 ~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~-~~--~---~~~~~v~~im~~~~~~~ 168 (494)
T 1vrd_A 97 TENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVR-FE--K---NLSKKIKDLMTPREKLI 168 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHH-hh--c---CCCCcHHHHhCCCCCCe
Confidence 5678874 789999999999999999999999999999 78999999999996 32 1 125789999998 999
Q ss_pred eecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHHHH
Q 019128 198 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 244 (346)
Q Consensus 198 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~~~ 244 (346)
++++++++.++++.|.+++++.+||||++|+++|+||..|+++....
T Consensus 169 ~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 169 VAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp ----------------------------------------CHHHHTC
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999998543
No 118
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.41 E-value=8.8e-14 Score=132.74 Aligned_cols=117 Identities=23% Similarity=0.380 Sum_probs=4.8
Q ss_pred cccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhhc
Q 019128 19 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 97 (346)
Q Consensus 19 ~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd-~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (346)
+++++|+++++++++++++.+|+++|.+++++.+||+| +++++|+||.+|+.+..
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------------------------ 151 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------------------------ 151 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------------------------
Confidence 56889999999999999999999999999999999999 78999999999986410
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHH
Q 019128 98 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRV 176 (346)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~ 176 (346)
....++.++|++..+++++++++++.+++++|.+++++.+||+| +|+++|+||.+|++ +.
T Consensus 152 ------------------~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll-~~ 212 (494)
T 1vrd_A 152 ------------------NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM-SV 212 (494)
T ss_dssp ---------------------------------------------------------------------------CH-HH
T ss_pred ------------------CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHH-hh
Confidence 01235778887434789999999999999999999999999999 89999999999998 44
Q ss_pred Hh
Q 019128 177 IS 178 (346)
Q Consensus 177 ~~ 178 (346)
+.
T Consensus 213 ~~ 214 (494)
T 1vrd_A 213 IE 214 (494)
T ss_dssp HT
T ss_pred hc
Confidence 43
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.37 E-value=1e-11 Score=118.45 Aligned_cols=116 Identities=19% Similarity=0.291 Sum_probs=101.4
Q ss_pred cccccccCCCeeecCCccHHHHHHHHHhCCcceeeeee---CCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhh
Q 019128 19 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 95 (346)
Q Consensus 19 ~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd---~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (346)
+++++|+++++++++++++.++++.|.+++++++||+| +++++|+||.+|++...
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~---------------------- 148 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS---------------------- 148 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS----------------------
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc----------------------
Confidence 35789999999999999999999999999999999997 58999999999986420
Q ss_pred hccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHH
Q 019128 96 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 174 (346)
Q Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~ 174 (346)
-...+++++|.+ .+++++++++++.++++.|.+++.+.+||+| +++++|++|..|++
T Consensus 149 --------------------~~~~~v~~im~~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil- 206 (491)
T 1zfj_A 149 --------------------DYNAPISEHMTS-EHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIE- 206 (491)
T ss_dssp --------------------CSSSBTTTSCCC-SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHH-
T ss_pred --------------------cCCCcHHHHcCC-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHH-
Confidence 123468889973 2688999999999999999999999999999 89999999999998
Q ss_pred HHHh
Q 019128 175 RVIS 178 (346)
Q Consensus 175 ~~~~ 178 (346)
+.+.
T Consensus 207 ~~~~ 210 (491)
T 1zfj_A 207 KVIE 210 (491)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 120
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.35 E-value=7.5e-14 Score=132.70 Aligned_cols=112 Identities=29% Similarity=0.408 Sum_probs=0.9
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCeeec
Q 019128 121 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT 200 (346)
Q Consensus 121 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~ 200 (346)
..+.|. .+++++++++++.++++.|.+++++++||+++++++|+||.+|++ . . ...++.++|++++++++
T Consensus 95 ~~~~m~--~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~-~---~----~~~~v~~im~~~~~~v~ 164 (486)
T 2cu0_A 95 AERLIV--EDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIA-A---R----EGKLVKELMTKEVITVP 164 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhc-c---C----CCCCHHHHccCCCeEEC
Confidence 355676 478999999999999999999999999999989999999999996 3 1 25689999998999999
Q ss_pred CCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 201 IDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 201 ~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
+++++.++++.|.+++++.+||||++|+++|+||.+||++..
T Consensus 165 ~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 165 ESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp ------------------------------------------
T ss_pred CcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhh
Confidence 999999999999999999999999999999999999999873
No 121
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.31 E-value=4.4e-13 Score=124.55 Aligned_cols=107 Identities=14% Similarity=0.199 Sum_probs=0.4
Q ss_pred ccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeC----CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhhc
Q 019128 22 KVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 97 (346)
Q Consensus 22 dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~----~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (346)
..|..+|+++.|+.|+.||+++|.+++++.+||+|+ ++++|+||.+|+-..
T Consensus 142 ~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~------------------------- 196 (556)
T 4af0_A 142 NGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ------------------------- 196 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc-------------------------
Confidence 457778999999999999999999999999999984 689999999996311
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHH
Q 019128 98 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 173 (346)
Q Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll 173 (346)
-...+++++|++ ++++++.+.++++|.++|.++++..+||+| +++++|+||.+|+.
T Consensus 197 ------------------d~~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~ 253 (556)
T 4af0_A 197 ------------------DAETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLL 253 (556)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred ------------------ccceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhh
Confidence 012458889985 799999999999999999999999999999 89999999999997
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.28 E-value=6.4e-14 Score=134.24 Aligned_cols=116 Identities=24% Similarity=0.302 Sum_probs=69.4
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEeC----CEEEEEeeHHHHHHHHHhcCCCcccccccccccc-
Q 019128 120 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE----NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP- 194 (346)
Q Consensus 120 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~----~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~- 194 (346)
++.++|.+ +++++.+++++.+++++|.+++++.+||+|+ ++++|+||.+|+. .... .....++.++|++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~-~~~~---~~~~~~v~~vm~~~ 182 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDID-FLAE---KDHTTLLSEVMTPR 182 (514)
T ss_dssp TCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC--------------------CC
T ss_pred hhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHH-hhhh---ccCCCCHHHHhCCC
Confidence 47788874 6889999999999999999999999999984 7999999999996 3321 1125689999998
Q ss_pred -CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHH
Q 019128 195 -NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 241 (346)
Q Consensus 195 -~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~ 241 (346)
+++++++++++.++++.|.+++.+.+||||++|+++|+||+.|+++.
T Consensus 183 ~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~ 230 (514)
T 1jcn_A 183 IELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKN 230 (514)
T ss_dssp BCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSC
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHH
Confidence 99999999999999999999999999999999999999999998865
No 123
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.28 E-value=6.5e-13 Score=126.24 Aligned_cols=162 Identities=16% Similarity=0.176 Sum_probs=22.7
Q ss_pred ccccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhhhhhccC
Q 019128 20 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWG 99 (346)
Q Consensus 20 v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 99 (346)
+.++|..+++++++++++.+++++|.+++++.+||+|+++++|+|+.+|++..
T Consensus 95 ~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~~--------------------------- 147 (486)
T 2cu0_A 95 AERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAAR--------------------------- 147 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhccC---------------------------
Confidence 46689999999999999999999999999999999988999999999998530
Q ss_pred CCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHHh
Q 019128 100 TSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVIS 178 (346)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~~ 178 (346)
...++.++|.+ +++++++++++.++++.|.+++.+.+||+| +++++|++|.+|++ +...
T Consensus 148 -----------------~~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil-~~~~ 207 (486)
T 2cu0_A 148 -----------------EGKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLV-ARKK 207 (486)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -----------------CCCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHH-Hhhh
Confidence 12346777764 688999999999999999999999999999 89999999999998 5443
Q ss_pred cCCCccccccccccccCCeeecCCCCHHHHHHHhHhCCCceeEEEc-CCCcEEEEEe
Q 019128 179 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD-RDGDVVDVVD 234 (346)
Q Consensus 179 ~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd-~~g~~~Giit 234 (346)
..... ......++.. ..++..+ .+.+..+...+...+ |+| ..|...++++
T Consensus 208 ~~~~~-~~~~g~~~v~--~~~~~~~--~~~a~~l~~~gvd~l-vvdta~G~~~~~L~ 258 (486)
T 2cu0_A 208 YKNAV-RDENGELLVA--AAVSPFD--IKRAIELDKAGVDVI-VVDTAHAHNLKAIK 258 (486)
T ss_dssp CTTCC-BCTTSCBCCE--EEECTTC--HHHHHHHHHTTCSEE-EEECSCCCCHHHHH
T ss_pred ccccc-cccCCceeec--ceechhh--HHHHHHHHHhcCCce-EEEecCCcEeehhh
Confidence 21100 0001111111 1122333 556777888888765 555 3555544443
No 124
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.24 E-value=6.9e-13 Score=127.09 Aligned_cols=116 Identities=11% Similarity=0.187 Sum_probs=68.6
Q ss_pred ccccccccCCCeeecCCccHHHHHHHHHhCCcceeeeeeC----CeEEEEEehHHHHHHHHHHHHHHHhhhhhHhhhhhh
Q 019128 18 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 93 (346)
Q Consensus 18 ~~v~dim~~~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~----~~~vGivt~~dll~~~~~~~~~~~~~~~~~~~~~~~ 93 (346)
.++.++|.++++++++++++.+|+++|.+++++.+||+|+ ++++|+||.+|+.... .
T Consensus 108 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~-~------------------ 168 (514)
T 1jcn_A 108 KNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLA-E------------------ 168 (514)
T ss_dssp HTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-----------------------
T ss_pred hhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhh-h------------------
Confidence 3678999999999999999999999999999999999984 8999999999975420 0
Q ss_pred hhhccCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHH
Q 019128 94 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 172 (346)
Q Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dl 172 (346)
.....++.++|.+..+++++++++++.+++++|.+++...+||+| +|+++|+||.+|+
T Consensus 169 ---------------------~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dl 227 (514)
T 1jcn_A 169 ---------------------KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDL 227 (514)
T ss_dssp ---------------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCC
T ss_pred ---------------------ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHH
Confidence 012245778887433789999999999999999999999999999 8999999999999
Q ss_pred H
Q 019128 173 L 173 (346)
Q Consensus 173 l 173 (346)
+
T Consensus 228 l 228 (514)
T 1jcn_A 228 K 228 (514)
T ss_dssp S
T ss_pred H
Confidence 7
No 125
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.13 E-value=2.1e-10 Score=78.66 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=58.2
Q ss_pred eeEeCCCCcHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHHHHHHhcCCCccccccccccccCCeee
Q 019128 131 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 199 (346)
Q Consensus 131 ~~~v~~~~~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 199 (346)
++++++++++.++++.|.+++++++||+++|+++|++|.+|+++.+...+......+++++|+++++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 678999999999999999999999999999999999999999844444433344678999998887653
No 126
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.13 E-value=2e-11 Score=83.72 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=43.3
Q ss_pred CCeeecCCccHHHHHHHHHhCCcceeeeeeCCeEEEEEehHHHHHH
Q 019128 27 NPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYD 72 (346)
Q Consensus 27 ~~i~v~~~~~l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dll~~ 72 (346)
.+++++|++|+.+|+++|.+++++++||+|+|+++|++|.+|+++.
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~ 46 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDK 46 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHH
Confidence 3689999999999999999999999999999999999999999865
No 127
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.97 E-value=2.8e-09 Score=92.08 Aligned_cols=58 Identities=21% Similarity=0.296 Sum_probs=52.0
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCcEEEEEe-CCEEEEEeeHHHHHHHHH
Q 019128 118 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVI 177 (346)
Q Consensus 118 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~V~d-~~~~~Giit~~dll~~~~ 177 (346)
..+++++|.+ +++++++++++.+|++.|.+++++++||+| +|+++|++|..|+++.+.
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 4578999974 789999999999999999999999999999 799999999999984443
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.61 E-value=8.4e-08 Score=65.37 Aligned_cols=47 Identities=13% Similarity=0.116 Sum_probs=43.8
Q ss_pred CCeeecCCCCHHHHHHHhHhCCCceeEEEcCCCcEEEEEehHHHHHHH
Q 019128 195 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 242 (346)
Q Consensus 195 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~~Giit~~Di~~~~ 242 (346)
++.++++++++.++++.|.+++++++||+|+ |+++|+||.+|++++.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~ 47 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKV 47 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 4678999999999999999999999999997 9999999999999863
No 129
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=97.66 E-value=2e-05 Score=56.49 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=42.6
Q ss_pred hcCCCCCCccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCC-CCeEEEec
Q 019128 269 MALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 328 (346)
Q Consensus 269 ~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~-g~~~~~~~ 328 (346)
+.+..++++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.++++
T Consensus 35 l~~~l~~~~~dTlgG~i~~~lg~iP~~Ge~v~~~~~~--------f~V~~~d~~rI~~v~v 87 (91)
T 2pli_A 35 FGTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQ--------FTVARADNRRLHTLMA 87 (91)
T ss_dssp HCCCCCCSSCCBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEECSSCEEEEEE
T ss_pred hCCCCCCCCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCEEEEEEE
Confidence 3444556679999999999999999999999999888 9999987 55655543
No 130
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=97.62 E-value=1.7e-05 Score=55.86 Aligned_cols=53 Identities=11% Similarity=0.054 Sum_probs=43.2
Q ss_pred hhcCCCCCCccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCCC-CeEEEec
Q 019128 268 AMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRFTC 328 (346)
Q Consensus 268 ~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~g-~~~~~~~ 328 (346)
.+.+..++++|+|++|++...++++|..|+.+.+.++. |+|.+++| ++.++++
T Consensus 25 ~l~~~l~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~v 78 (83)
T 3llb_A 25 FFGSEFSDEEFDTVGGLVMSAFGHLPKRNEVVELGEFR--------FRVLNADSRRVHLLRL 78 (83)
T ss_dssp HHCCCCCTTTCSBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEECSSCEEEEEE
T ss_pred HhCCCCCCCCCcCHHHHHHHHhCcCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 34445566789999999999999999999999999988 99999976 5544443
No 131
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=97.58 E-value=1.9e-05 Score=55.32 Aligned_cols=51 Identities=6% Similarity=0.032 Sum_probs=42.0
Q ss_pred hhcCCCCCCccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCCC-CeEEE
Q 019128 268 AMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRF 326 (346)
Q Consensus 268 ~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~g-~~~~~ 326 (346)
.+.+..++++|+|++|++...++++|..|+.+.+.++. |+|.+++| ++.++
T Consensus 25 ~l~~~l~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v 76 (81)
T 3lae_A 25 MFNWELDTEDARTFNGLILEHLEEIPDEGTICEIDGLL--------ITILEVGDNMIKQA 76 (81)
T ss_dssp HHCCCCCCSSCSBHHHHHHHHCSSCCCTTCEEEETTEE--------EEEEEEETTEEEEE
T ss_pred HhCCCCCCCCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEE
Confidence 34445566779999999999999999999999999988 99999876 44443
No 132
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=97.52 E-value=3e-05 Score=54.98 Aligned_cols=45 Identities=9% Similarity=-0.038 Sum_probs=38.7
Q ss_pred CccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCC-CCeEEEec
Q 019128 276 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 328 (346)
Q Consensus 276 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~-g~~~~~~~ 328 (346)
++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.++++
T Consensus 37 ~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~v 82 (86)
T 2pls_A 37 GVYHTLSGMIMWLLGRLPQTGDITFWENWR--------LEVIDMDSKRIDKVLA 82 (86)
T ss_dssp CSCCBHHHHHHHHHTSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred CCcccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 579999999999999999999999999888 9999987 45555443
No 133
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=97.49 E-value=3.9e-05 Score=55.23 Aligned_cols=52 Identities=6% Similarity=-0.001 Sum_probs=41.9
Q ss_pred hcCCCCCCccccccccccccccCCCCCcccccC--CCCCCCCCCceeEEEecCC-CCeEEEec
Q 019128 269 MALSPNDDEEDNRSEGSLKFASEGADTARYLSY--PSPSPGVPSAFAFKVQDNK-GLMHRFTC 328 (346)
Q Consensus 269 ~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~V~d~~-g~~~~~~~ 328 (346)
+.+..++++|+|++|++...++++|..|+.+.+ .++. |+|.+++ +++.++++
T Consensus 33 l~~~l~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~~~--------f~V~~~~~~rI~~v~v 87 (93)
T 2r2z_A 33 FETDLHMSDVDTMAGYLITALGTIPDEGEKPSFEVGNIK--------LTAEEMEGTRLLVLRV 87 (93)
T ss_dssp HTCCCCCTTCCBHHHHHHHHHSSCCCTTCCCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred hCCCCCCCCcccHHHHHHHHhCCCCCCCCEEEEecCCEE--------EEEEEeeCCEEEEEEE
Confidence 334445567999999999999999999999977 8888 9999986 55555544
No 134
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=97.48 E-value=2.8e-05 Score=56.05 Aligned_cols=45 Identities=4% Similarity=0.118 Sum_probs=38.8
Q ss_pred CccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCC-CCeEEEec
Q 019128 276 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 328 (346)
Q Consensus 276 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~-g~~~~~~~ 328 (346)
++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.++++
T Consensus 45 ~~~dTlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~V~v 90 (94)
T 2oai_A 45 NNYHTLAGMCISYFGRIPHVGEYFDWAGWR--------IEIVDLDGARIDXLLL 90 (94)
T ss_dssp CCCSBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEcCCEEEEEEE
Confidence 568999999999999999999999999888 9999987 55555543
No 135
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=97.46 E-value=4e-05 Score=54.81 Aligned_cols=50 Identities=6% Similarity=-0.083 Sum_probs=40.8
Q ss_pred cCCCCC--CccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCC-CCeEEEe
Q 019128 270 ALSPND--DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFT 327 (346)
Q Consensus 270 ~~~~~~--~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~-g~~~~~~ 327 (346)
.+..++ ++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.+++
T Consensus 33 ~~~l~~~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~v~ 85 (90)
T 2p13_A 33 EHDLVDEAERYSTLGGYLLWQFGYIPAAGEQITVDGLI--------FEIVSVNKHNIGKVR 85 (90)
T ss_dssp TSCCCCTTCCCCBHHHHHHHHHSSCCCTTCEEEETTEE--------EEECCBCSSSBCEEE
T ss_pred CCCCCCcCCCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCEEEEEE
Confidence 334444 579999999999999999999999999888 9999987 4555544
No 136
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=97.45 E-value=3e-05 Score=55.71 Aligned_cols=54 Identities=11% Similarity=0.160 Sum_probs=43.0
Q ss_pred HhhcCC-CC-CCccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCC-CCeEEEec
Q 019128 267 SAMALS-PN-DDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 328 (346)
Q Consensus 267 ~~~~~~-~~-~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~-g~~~~~~~ 328 (346)
..+.+. .+ +++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.++++
T Consensus 32 ~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~V~v 88 (92)
T 2o3g_A 32 PQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWR--------FEVVEKEGQRIERVKI 88 (92)
T ss_dssp TTTTCCCCCTTCSCSBHHHHHHHHHTSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred HHhCCCCCCcCCCcccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 334444 45 5679999999999999999999999999888 9999987 45555543
No 137
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=97.43 E-value=3.7e-05 Score=56.01 Aligned_cols=50 Identities=16% Similarity=0.147 Sum_probs=41.7
Q ss_pred cCCCCCCccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCCCC------eEEEec
Q 019128 270 ALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGL------MHRFTC 328 (346)
Q Consensus 270 ~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~g~------~~~~~~ 328 (346)
.+..++++|+|++|++...++++|..|+.+.++ +. |+|.+++|+ +.++++
T Consensus 30 g~~l~~e~~dTlgGli~~~lg~iP~~Gd~v~~~-~~--------f~V~~~d~~~~~r~rI~~V~v 85 (101)
T 2p3h_A 30 GYELPEGDYETISGLLFDHANALLKTGDVIEIP-LD--------FEPEDYLNNTSPTQRILRITV 85 (101)
T ss_dssp TSCCCCSSCCBHHHHHHHHHCSCCCTTCEEEEE-CC--------CCGGGGTTCSSCCCCEEEEEE
T ss_pred CCCCCCCCCccHHHHHHHHhCCCCCCCCEEEEe-EE--------EEEEEEeCCCCcCCEEEEEEE
Confidence 344456679999999999999999999999988 99 999999865 665554
No 138
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=97.42 E-value=5e-05 Score=53.79 Aligned_cols=53 Identities=8% Similarity=0.102 Sum_probs=42.0
Q ss_pred hhcCC-CCC-CccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCC-CCeEEEec
Q 019128 268 AMALS-PND-DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 328 (346)
Q Consensus 268 ~~~~~-~~~-~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~-g~~~~~~~ 328 (346)
.+.+. .++ ++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.++++
T Consensus 25 ~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~v 80 (86)
T 2p4p_A 25 ALNIHTFPRDENYETIGGFMMYMLRXIPXXTDFVLYDXYX--------FEIIDTENFRIDQLMV 80 (86)
T ss_dssp HTTCCCSCCSCSSCBHHHHHHHHHCSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred HhCCCCCCcCCCCccHHHHHHHHhCCCCCCCcEEEEeeEE--------EEEEEccCCEEEEEEE
Confidence 34443 443 579999999999999999999999999888 9999986 45555543
No 139
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=97.36 E-value=4.2e-05 Score=54.29 Aligned_cols=52 Identities=12% Similarity=0.025 Sum_probs=41.2
Q ss_pred hcCCCCCCccccccccccccccCCCCCcc--cccCCC----CCCCCCCceeEEEecCC-CCeEEEec
Q 019128 269 MALSPNDDEEDNRSEGSLKFASEGADTAR--YLSYPS----PSPGVPSAFAFKVQDNK-GLMHRFTC 328 (346)
Q Consensus 269 ~~~~~~~~~~~T~~~~~~~~~~~~~~~g~--~~~~~~----~~~~~~~~~~~~V~d~~-g~~~~~~~ 328 (346)
+.+..++++|+|++|++...++++|..|+ .+.+.+ +. |+|.+++ +++.++++
T Consensus 25 l~~~l~~~~~dTl~G~v~~~lg~iP~~Gd~~~v~~~~~~~~~~--------f~V~~~~~~rI~~v~v 83 (87)
T 2rk5_A 25 FETDLESDNVDTIAGFYLTGVGTIPSQEEKEHFEVESNGKHLE--------LINDKVKDGRVTKLKI 83 (87)
T ss_dssp HTCCCCCTTCCBHHHHHHHHHCSCCCSSSCCEEEEEETTEEEE--------EEEEEEETTEEEEEEE
T ss_pred hCCCCCCCCcccHHHHHHHHhCcCCCCCCcEEEEECCceEEEE--------EEEEEEeCCEEEEEEE
Confidence 44455666799999999999999999999 887776 67 9999987 45555443
No 140
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=97.31 E-value=9.3e-05 Score=53.21 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=39.2
Q ss_pred CccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCC-CCeEEEec
Q 019128 276 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 328 (346)
Q Consensus 276 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~-g~~~~~~~ 328 (346)
++|+|++|++...++++|..|+.+.+.++. |+|.+++ +++.++++
T Consensus 44 ~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~V~v 89 (93)
T 2nqw_A 44 DEVDTLSGLFLEIKQELPHVGDTAVYEPFR--------FQVTQMDKRRIIEIKI 89 (93)
T ss_dssp TTCSBHHHHHHHHHCSCCCTTCEEEETTEE--------EEEEEECSSSEEEEEE
T ss_pred CCcccHHHHHHHHhCcCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 468999999999999999999999999888 9999987 56666554
No 141
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=97.13 E-value=0.00011 Score=54.84 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=38.1
Q ss_pred CccccccccccccccCCCCCcccccCCCCCCCCCCceeEEEecCCC-CeEEEe
Q 019128 276 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRFT 327 (346)
Q Consensus 276 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~d~~g-~~~~~~ 327 (346)
++|+|++|++...++++|..|+.+.+.++. |+|.+++| ++.+++
T Consensus 64 ~~~dTlgGlil~~lg~iP~~Gd~v~~~g~~--------f~V~~~d~~RI~~V~ 108 (113)
T 3ded_A 64 GNIHTLAGVMLYQLGRVPSVTDRFEWNGFS--------FEVVDMDRTRVDKIL 108 (113)
T ss_dssp TCCCBHHHHHHHHHCSSCCTTCEEEETTEE--------EEEEEEETTEEEEEE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCeEEEEE
Confidence 568999999999999999999999999998 99999976 444433
No 142
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=59.01 E-value=17 Score=24.38 Aligned_cols=25 Identities=12% Similarity=0.242 Sum_probs=21.6
Q ss_pred CceeEEEcCCCcEEEEEehHHHHHH
Q 019128 217 FLHLPVVDRDGDVVDVVDVIHITHA 241 (346)
Q Consensus 217 ~~~~~Vvd~~g~~~Giit~~Di~~~ 241 (346)
.+.+-++|++|...|+++..+.++.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHH
Confidence 3557799999999999999998875
No 143
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=37.99 E-value=28 Score=26.78 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCcceeeeeeCCeEEEEEehHHH
Q 019128 37 AVEALQKMVQGKFRHLPVVENGEVIALLDIAKC 69 (346)
Q Consensus 37 l~ea~~~m~~~~~~~lpVvd~~~~vGivt~~dl 69 (346)
+.+.++.+.+.+.+.+.|..+++++|+|...|-
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~ 153 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEGSRVLGVIALKDI 153 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEEECCEEEEEEEEecC
Confidence 667777888889888888889999999998774
No 144
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=29.64 E-value=1.2e+02 Score=20.22 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=21.9
Q ss_pred CcEEEEEe-CCEEEEEeeHHHHHHHHHhcCC
Q 019128 152 LSSAVVTV-ENKPRGILTSKDILMRVISQNL 181 (346)
Q Consensus 152 ~~~l~V~d-~~~~~Giit~~dll~~~~~~~~ 181 (346)
...+=+++ +|.-+|+++..+.+..+-..+.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~L 43 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRNL 43 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcCC
Confidence 34566777 8999999999999844444443
No 145
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=29.51 E-value=39 Score=24.75 Aligned_cols=16 Identities=38% Similarity=0.735 Sum_probs=13.8
Q ss_pred eEEEcCCCcEEEEEeh
Q 019128 220 LPVVDRDGDVVDVVDV 235 (346)
Q Consensus 220 ~~Vvd~~g~~~Giit~ 235 (346)
.||.|++|+++|+|+.
T Consensus 106 ~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEECTTCCEEEEEEE
T ss_pred EeEECCCCCEEEEEEE
Confidence 6999888999999964
No 146
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=28.86 E-value=39 Score=25.21 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=16.0
Q ss_pred eeEEEcCCCcEEEEEehHHHH
Q 019128 219 HLPVVDRDGDVVDVVDVIHIT 239 (346)
Q Consensus 219 ~~~Vvd~~g~~~Giit~~Di~ 239 (346)
..||.|++|+++|+|+..--+
T Consensus 110 ~~PV~~~~g~viGvv~vg~~~ 130 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIGLEL 130 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEH
T ss_pred EEeEEcCCCCEEEEEEEeEEH
Confidence 369998789999999654433
No 147
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=26.49 E-value=66 Score=24.67 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=28.3
Q ss_pred cHHHHHHHHHHcCCcEEEEEeCCEEEEEeeHHHHH
Q 019128 139 TVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 173 (346)
Q Consensus 139 ~l~~~~~~m~~~~~~~l~V~d~~~~~Giit~~dll 173 (346)
.+.+.++.+.+.+...+.|..+++++|+|...|.+
T Consensus 120 ~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~i 154 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCC
Confidence 36677777788888888888899999999988753
No 148
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=25.30 E-value=35 Score=27.63 Aligned_cols=25 Identities=20% Similarity=0.157 Sum_probs=18.0
Q ss_pred CCceeEEEcCCCcEEEEEehHHHHH
Q 019128 216 KFLHLPVVDRDGDVVDVVDVIHITH 240 (346)
Q Consensus 216 ~~~~~~Vvd~~g~~~Giit~~Di~~ 240 (346)
+-..-||+|.+|+++||-|..|=..
T Consensus 125 GdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 125 GDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCccCCCCCcEEEEEeccCCcc
Confidence 5567899999999999998877543
No 149
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=24.40 E-value=44 Score=25.82 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=19.0
Q ss_pred HhCCCceeEEEcCCCcEEEEEeh
Q 019128 213 HDGKFLHLPVVDRDGDVVDVVDV 235 (346)
Q Consensus 213 ~~~~~~~~~Vvd~~g~~~Giit~ 235 (346)
...+-..-|++|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 34566789999999999999863
No 150
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=23.61 E-value=44 Score=27.39 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.8
Q ss_pred CCceeEEEcCCCcEEEEEehH
Q 019128 216 KFLHLPVVDRDGDVVDVVDVI 236 (346)
Q Consensus 216 ~~~~~~Vvd~~g~~~Giit~~ 236 (346)
+-..-|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 566789999899999999753
No 151
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=21.47 E-value=48 Score=27.24 Aligned_cols=22 Identities=9% Similarity=0.119 Sum_probs=18.3
Q ss_pred hCCCceeEEEcCCCcEEEEEeh
Q 019128 214 DGKFLHLPVVDRDGDVVDVVDV 235 (346)
Q Consensus 214 ~~~~~~~~Vvd~~g~~~Giit~ 235 (346)
..+-..-|++|.+|+++||+|.
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECC
T ss_pred CCCCchHHeeCCCCeEEEEEee
Confidence 3466778999999999999965
No 152
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=20.06 E-value=57 Score=27.07 Aligned_cols=21 Identities=5% Similarity=0.134 Sum_probs=18.1
Q ss_pred CCCceeEEEcCCCcEEEEEeh
Q 019128 215 GKFLHLPVVDRDGDVVDVVDV 235 (346)
Q Consensus 215 ~~~~~~~Vvd~~g~~~Giit~ 235 (346)
.+-..-|++|.+|+++||.|.
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEEC
T ss_pred CCcchhHeecCCCeEEEEEEe
Confidence 466778999999999999875
Done!