Query 019129
Match_columns 346
No_of_seqs 178 out of 1502
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 06:55:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019129.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019129hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 6E-104 1E-108 763.7 23.7 293 30-340 22-324 (324)
2 cd00693 secretory_peroxidase H 100.0 3.4E-97 7E-102 713.7 24.0 293 32-339 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 1E-70 2.2E-75 513.0 10.7 228 49-304 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.2E-67 2.7E-72 504.2 19.8 230 47-337 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 5.5E-65 1.2E-69 480.2 18.4 230 44-326 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 3.8E-63 8.3E-68 466.4 19.7 230 36-325 4-248 (250)
7 cd00692 ligninase Ligninase an 100.0 9.5E-63 2.1E-67 478.1 19.8 238 45-342 16-289 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 1.9E-61 4.1E-66 454.5 19.8 219 47-325 18-248 (251)
9 cd00314 plant_peroxidase_like 100.0 1.9E-58 4.1E-63 435.4 15.5 223 48-321 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 5E-56 1.1E-60 438.1 17.0 259 47-330 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 2.8E-53 6E-58 442.0 18.7 258 47-330 55-408 (716)
12 PRK15061 catalase/hydroperoxid 100.0 8.7E-50 1.9E-54 413.9 18.2 258 47-330 57-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1.7E-48 3.6E-53 367.0 10.4 215 54-321 32-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1E-39 2.2E-44 311.1 16.1 220 51-323 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.1E-34 2.5E-39 302.8 16.0 220 48-324 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 3E-34 6.6E-39 298.3 17.1 221 51-324 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 4.9E-30 1.1E-34 256.7 15.7 252 48-323 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.7 3.3E-16 7.1E-21 157.9 13.5 217 51-323 452-725 (730)
19 PF07172 GRP: Glycine rich pro 65.1 5.9 0.00013 32.4 2.6 14 1-14 1-14 (95)
20 PF11895 DUF3415: Domain of un 42.7 21 0.00046 28.5 2.3 17 308-324 3-19 (80)
21 PF10113 Fibrillarin_2: Fibril 39.1 66 0.0014 33.4 5.7 130 93-243 320-459 (505)
22 KOG0427 Ubiquitin conjugating 24.9 30 0.00066 30.1 0.6 43 13-74 116-158 (161)
23 KOG0400 40S ribosomal protein 22.2 62 0.0013 28.3 1.9 33 173-216 31-64 (151)
24 PLN00017 photosystem I reactio 22.0 43 0.00094 27.0 0.9 21 300-320 37-57 (90)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=5.9e-104 Score=763.69 Aligned_cols=293 Identities=39% Similarity=0.667 Sum_probs=278.5
Q ss_pred CCCCCcCccccCCccHHHHHHHHHHHHHHhCcchhhhhHHhhhccccccCCCCccccccccCcccccccCCCCCcchHHH
Q 019129 30 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRY 109 (346)
Q Consensus 30 ~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~t~~~~~E~~~~~N~~L~g~~~ 109 (346)
.++|+++||++|||++|+||+++|++++.++|+++|++|||+||||||+||||||||+++ .+||++++|.+|+||++
T Consensus 22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~~ 98 (324)
T PLN03030 22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYDV 98 (324)
T ss_pred hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHHH
Confidence 467999999999999999999999999999999999999999999999999999999865 37999999999999999
Q ss_pred HHHHHHHHHhhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCc
Q 019129 110 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDA 189 (346)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~ 189 (346)
|+.||++||++||++|||||||||||||||+++|||.|+|++||||+++|.+.++. +||.|+.++++|++.|+++||+.
T Consensus 99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~ 177 (324)
T PLN03030 99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLNT 177 (324)
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999999999999999999877664 89999999999999999999999
Q ss_pred ccceeeecccccccccccccccccccccccccccccC------CCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCC
Q 019129 190 PGLVALLGLSYYYWSISSGSHSVGRTHCVKLVHRLYP------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGT 263 (346)
Q Consensus 190 ~dlVaLsG~~~~~~~~s~gaHTiG~~hc~~f~~Rly~------~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~T 263 (346)
+|||+||| |||||++||.+|.+|||| .+||+||+.|+..|+..||. .++..+ .++||+.|
T Consensus 178 ~DlVaLsG-----------AHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~-~~~~~~--~~~lD~~T 243 (324)
T PLN03030 178 QDLVTLVG-----------GHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQ-NGDGSR--RIALDTGS 243 (324)
T ss_pred HHheeeee-----------ccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCC-CCCCCc--cccCCCCC
Confidence 99999999 999999999999999997 26999999999999999996 222233 57899999
Q ss_pred CCccChHHHHHhhcCCCCcccccccccCCChHHHHHHHhhCH----HHHHHHHHHHHHHHhhCCCCCCCCCccccccccc
Q 019129 264 PMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ----DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 339 (346)
Q Consensus 264 p~~FDN~Yy~nl~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~igvltg~~GeiR~~C~~~ 339 (346)
|.+|||+||+||+.++|+|+|||+|++|++|+++|++||.|+ +.|+++|++||+|||+|+|+||.+||||++|+++
T Consensus 244 p~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~v 323 (324)
T PLN03030 244 SNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAI 323 (324)
T ss_pred CcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceecccccc
Confidence 999999999999999999999999999999999999999875 5999999999999999999999999999999999
Q ss_pred c
Q 019129 340 N 340 (346)
Q Consensus 340 n 340 (346)
|
T Consensus 324 N 324 (324)
T PLN03030 324 N 324 (324)
T ss_pred C
Confidence 8
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=3.4e-97 Score=713.72 Aligned_cols=293 Identities=44% Similarity=0.753 Sum_probs=281.0
Q ss_pred CCCcCccccCCccHHHHHHHHHHHHHHhCcchhhhhHHhhhccccccCCCCccccccccCcccccccCCCCCcchHHHHH
Q 019129 32 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIE 111 (346)
Q Consensus 32 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~t~~~~~E~~~~~N~~L~g~~~I~ 111 (346)
||+++||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||+++.++.+|+++++|.+|+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999999887778999999999999999999
Q ss_pred HHHHHHHhhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCccc
Q 019129 112 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG 191 (346)
Q Consensus 112 ~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d 191 (346)
.||++||+.||++||||||||||||+||+++|||.|+|++||+|+.++.+..+ .+||+|+.+++++++.|+++||+++|
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999998877655 78999999999999999999999999
Q ss_pred ceeeecccccccccccccccccccccccccccccC-----CCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCCc
Q 019129 192 LVALLGLSYYYWSISSGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMV 266 (346)
Q Consensus 192 lVaLsG~~~~~~~~s~gaHTiG~~hc~~f~~Rly~-----~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp~~ 266 (346)
||||+| |||||++||.+|.+|+|| .+||+||+.|+..|+..||. .++.++ .++||+.||.+
T Consensus 160 ~VaL~G-----------aHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~-~~~~~~--~~~lD~~Tp~~ 225 (298)
T cd00693 160 LVALSG-----------AHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPA-GGDDDT--LVPLDPGTPNT 225 (298)
T ss_pred heeecc-----------cceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCC-CCCCCc--cccCCCCCCCc
Confidence 999999 999999999999999997 47999999999999999997 333344 68999999999
Q ss_pred cChHHHHHhhcCCCCcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhhCCCCCCCCCccccccccc
Q 019129 267 LDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 339 (346)
Q Consensus 267 FDN~Yy~nl~~~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igvltg~~GeiR~~C~~~ 339 (346)
|||+||+||+.++|+|+|||+|+.|++|+++|++||.||+.|+++|++||+||++++|+||.+||||++|+++
T Consensus 226 FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 226 FDNSYYKNLLAGRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cccHHHHHHHhcccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1e-70 Score=512.98 Aligned_cols=228 Identities=42% Similarity=0.721 Sum_probs=210.3
Q ss_pred HHHHHHHHHHhCcchhhhhHHhhhccccc-cCCCCccccccccCcccccccCCCCCcc-hHHHHHHHHHHHHhhCCCCCc
Q 019129 49 IREQVKLLYKRHKNTAFSWLRNIFHDCAV-QSCDASLLLDSTRKTLSEKEMDRSFGMR-NFRYIENIKEAVERECPGVVS 126 (346)
Q Consensus 49 Vr~~v~~~~~~~~~~aa~llRL~FHDcfv-~GcDgSilld~t~~~~~E~~~~~N~~L~-g~~~I~~iK~~le~~cp~~VS 126 (346)
||++|++++.++++++|+||||+|||||+ +|||||||+. .+|+++++|.+|+ ++++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999983 4799999999997 999999999999999999999
Q ss_pred hhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeecccccccccc
Q 019129 127 CADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGLSYYYWSIS 206 (346)
Q Consensus 127 cADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG~~~~~~~~s 206 (346)
|||||+||+++||+.+|||.|+|++||+|+.++.+.++ .+||.|+.+++++++.|+++|||++|||||+|
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsG--------- 145 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSG--------- 145 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHG---------
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceec---------
Confidence 99999999999999999999999999999999999877 78999999999999999999999999999999
Q ss_pred cccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCCccChHHHHHhhcCCCCccccc
Q 019129 207 SGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDH 286 (346)
Q Consensus 207 ~gaHTiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp~~FDN~Yy~nl~~~~glL~SD~ 286 (346)
|||||++||.+|. |+|..+||+||+.|+.. .|+. ++ ++ .+++| ||.+|||+||++|++++|+|.||+
T Consensus 146 --aHTiG~~~c~~f~-rl~~~~dp~~d~~~~~~---~C~~-~~--~~--~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~ 212 (230)
T PF00141_consen 146 --AHTIGRAHCSSFS-RLYFPPDPTMDPGYAGQ---NCNS-GG--DN--GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQ 212 (230)
T ss_dssp --GGGSTEESGGCTG-GTSCSSGTTSTHHHHHH---SSST-SG--CT--CEESS--STTS-SSHHHHHHHHTEEEEHHHH
T ss_pred --ccccccceecccc-cccccccccccccccee---ccCC-Cc--cc--ccccc--CCCcchhHHHHHHhcCCCcCHHHH
Confidence 9999999999999 99988899999999988 9932 22 22 57888 999999999999999999999999
Q ss_pred ccccCCChHHHHHHHhhC
Q 019129 287 QLATDKRTRPYVKKMAKS 304 (346)
Q Consensus 287 ~L~~d~~t~~~V~~yA~d 304 (346)
+|++|++|+++|++||+|
T Consensus 213 ~L~~d~~t~~~V~~yA~d 230 (230)
T PF00141_consen 213 ALLNDPETRPIVERYAQD 230 (230)
T ss_dssp HHHHSTTHHHHHHHHHHT
T ss_pred HHhcCHHHHHHHHHHhcC
Confidence 999999999999999986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.2e-67 Score=504.25 Aligned_cols=230 Identities=28% Similarity=0.432 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHhCcchhhhhHHhhhcccc-------ccCCCCccccccccCcccccccCCCCCc-chHHHHHHHHHHHH
Q 019129 47 DIIREQVKLLYKRHKNTAFSWLRNIFHDCA-------VQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVE 118 (346)
Q Consensus 47 ~iVr~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSilld~t~~~~~E~~~~~N~~L-~g~~~I~~iK~~le 118 (346)
+.+++++ ..+.++|.++|.+|||+||||| ++||||||+++ +|+++++|.|| +||++|++||+++
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 4666777 4477899999999999999999 89999999984 69999999999 6999999999997
Q ss_pred hhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeecc
Q 019129 119 RECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGL 198 (346)
Q Consensus 119 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG~ 198 (346)
| +|||||||+||||+||+.+|||.|+|++||+|++++.+ +.+||+|+.+++++++.|+++||+++|||+|+|
T Consensus 87 ---~-~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsG- 158 (289)
T PLN02608 87 ---P-KITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSG- 158 (289)
T ss_pred ---C-CcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcc-
Confidence 4 79999999999999999999999999999999999863 468999999999999999999999999999999
Q ss_pred cccccccccccccccccccccccccc-cCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCCccChHHHHHhhc
Q 019129 199 SYYYWSISSGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 277 (346)
Q Consensus 199 ~~~~~~~s~gaHTiG~~hc~~f~~Rl-y~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp~~FDN~Yy~nl~~ 277 (346)
|||||++||. |+ |+ ++ + + .||.+|||+||+||+.
T Consensus 159 ----------AHTiG~ahc~----r~g~~---------------------g~-~--------~-~Tp~~FDN~Yy~~ll~ 193 (289)
T PLN02608 159 ----------GHTLGRAHPE----RSGFD---------------------GP-W--------T-KEPLKFDNSYFVELLK 193 (289)
T ss_pred ----------cccccccccc----CCCCC---------------------CC-C--------C-CCCCccChHHHHHHHc
Confidence 9999999995 43 21 11 1 1 5899999999999999
Q ss_pred C--CCC--cccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhhCCCCCCCCCccccccc
Q 019129 278 N--KGL--MMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 337 (346)
Q Consensus 278 ~--~gl--L~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igvltg~~GeiR~~C~ 337 (346)
+ +|+ |+|||+|+.|++|+++|++||.||++|+++|++||+||++++|+||.+||+.+.-+
T Consensus 194 ~~~~gll~L~SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 194 GESEGLLKLPTDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred CCcCCccccccCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 8 788 79999999999999999999999999999999999999999999999999988654
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=5.5e-65 Score=480.17 Aligned_cols=230 Identities=29% Similarity=0.438 Sum_probs=207.6
Q ss_pred cHHHHHHHHHHHHHHhCcchhhhhHHhhhccccccCCCCcccccc---ccCcccccccCCCCCc-chHHHHHHHHHHHHh
Q 019129 44 QAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDS---TRKTLSEKEMDRSFGM-RNFRYIENIKEAVER 119 (346)
Q Consensus 44 ~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~---t~~~~~E~~~~~N~~L-~g~~~I~~iK~~le~ 119 (346)
..++||+++|++.++ +++++|++|||+|||||+ ||+|+++++ +..+.+|+++++|.+| +||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 447899999999999 999999999999999994 777776643 3334579999999999 8999999999987
Q ss_pred hCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeeccc
Q 019129 120 ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGLS 199 (346)
Q Consensus 120 ~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG~~ 199 (346)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+++|||+|+|
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsG-- 160 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSG-- 160 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcc--
Confidence 5 79999999999999999999999999999999999987777788999999999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCCccChHHHHHhhcCC
Q 019129 200 YYYWSISSGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNK 279 (346)
Q Consensus 200 ~~~~~~s~gaHTiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp~~FDN~Yy~nl~~~~ 279 (346)
|||||++||..+ . | ++.+ ..||.+|||+||+||+.++
T Consensus 161 ---------aHTiG~a~c~~~--~-~----------------------~g~~---------~~tp~~FDn~Yy~~ll~~~ 197 (253)
T cd00691 161 ---------AHTLGRCHKERS--G-Y----------------------DGPW---------TKNPLKFDNSYFKELLEED 197 (253)
T ss_pred ---------cceeecccccCC--C-C----------------------CCCC---------CCCCCcccHHHHHHHhcCC
Confidence 999999999531 0 1 1111 1589999999999999999
Q ss_pred C--------CcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhhCCCCC
Q 019129 280 G--------LMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLT 326 (346)
Q Consensus 280 g--------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igvlt 326 (346)
| +|+||++|+.|++|+++|+.||.|+++|+++|++||+||+++||..
T Consensus 198 g~~~~~~~~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 198 WKLPTPGLLMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred CccCcCcceechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 9 9999999999999999999999999999999999999999999863
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=3.8e-63 Score=466.40 Aligned_cols=230 Identities=30% Similarity=0.466 Sum_probs=206.3
Q ss_pred CccccC--CccHHHHHHHHHHHHHHhCcchhhhhHHhhhc-----ccccc--CCCCccccccccCcccccccCCCCCc-c
Q 019129 36 NFYKDT--CPQAEDIIREQVKLLYKRHKNTAFSWLRNIFH-----DCAVQ--SCDASLLLDSTRKTLSEKEMDRSFGM-R 105 (346)
Q Consensus 36 ~fY~~s--CP~~e~iVr~~v~~~~~~~~~~aa~llRL~FH-----Dcfv~--GcDgSilld~t~~~~~E~~~~~N~~L-~ 105 (346)
+||... |+.+++.|++.+++.+ .+++++|.+|||+|| ||+++ ||||||.+ .+|+++++|.+| +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 566533 8899999999999988 789999999999999 88876 99999954 469999999999 8
Q ss_pred hHHHHHHHHHHHHhhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHH-
Q 019129 106 NFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAA- 184 (346)
Q Consensus 106 g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~- 184 (346)
||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 489999999999999999999999999999999999865 46899999999999999997
Q ss_pred cCCCcccceeeecccccccccccccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCC
Q 019129 185 IGIDAPGLVALLGLSYYYWSISSGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTP 264 (346)
Q Consensus 185 ~Gl~~~dlVaLsG~~~~~~~~s~gaHTiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp 264 (346)
+||+++|||||+| |||||++||. |+ + + .+.+ + .||
T Consensus 149 ~Gl~~~d~VaLsG-----------aHTiG~~hc~----r~-~-----~---------------~g~~--------~-~tp 183 (250)
T PLN02364 149 MGLSDKDIVALSG-----------AHTLGRCHKD----RS-G-----F---------------EGAW--------T-SNP 183 (250)
T ss_pred cCCCHHHheeeec-----------ceeeccccCC----CC-C-----C---------------CCCC--------C-CCC
Confidence 5999999999999 9999999993 32 1 0 1111 2 589
Q ss_pred CccChHHHHHhhcC--CCCcc--cccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhhCCCC
Q 019129 265 MVLDNNYYRNILDN--KGLMM--VDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 325 (346)
Q Consensus 265 ~~FDN~Yy~nl~~~--~glL~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igvl 325 (346)
.+|||+||++|+.+ +|+|. |||+|+.|++|+.+|+.||.|+++|+++|++||+||+++|+-
T Consensus 184 ~~fDn~Yy~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 184 LIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred CccchHHHHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999 89875 999999999999999999999999999999999999999974
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=9.5e-63 Score=478.13 Aligned_cols=238 Identities=26% Similarity=0.326 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHHhCc---chhhhhHHhhhccccc------------cCCCCccccccccCcccccccCCCCCcchHHH
Q 019129 45 AEDIIREQVKLLYKRHK---NTAFSWLRNIFHDCAV------------QSCDASLLLDSTRKTLSEKEMDRSFGMRNFRY 109 (346)
Q Consensus 45 ~e~iVr~~v~~~~~~~~---~~aa~llRL~FHDcfv------------~GcDgSilld~t~~~~~E~~~~~N~~L~g~~~ 109 (346)
+|..|+++|++.+..+. ..++.+|||+||||++ +|||||||++.+ .|+++++|.||+ ++
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL~--~v 89 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGLD--EI 89 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCHH--HH
Confidence 47799999999998554 4677899999999996 799999999753 699999999998 99
Q ss_pred HHHHHHHHHhhCCCCCchhhHHHhhhcchhhh-cCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCC
Q 019129 110 IENIKEAVERECPGVVSCADILVLSGRDGVVA-LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 188 (346)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~av~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~ 188 (346)
|+.||..+|+.| |||||||+||||+||+. .|||.|+|++||+|++.+.+ +++||.|+.++++|++.|+++||+
T Consensus 90 vd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf~ 163 (328)
T cd00692 90 VEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGFS 163 (328)
T ss_pred HHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999999998 99999999999999996 59999999999999999864 468999999999999999999999
Q ss_pred cccceeeecccccccccccccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCCccC
Q 019129 189 APGLVALLGLSYYYWSISSGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLD 268 (346)
Q Consensus 189 ~~dlVaLsG~~~~~~~~s~gaHTiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp~~FD 268 (346)
++|||+|+| |||||++|. +||+++ .+++| .||.+||
T Consensus 164 ~~E~VaLsG-----------AHTiG~a~~----------~Dps~~----------------------g~p~D-~TP~~FD 199 (328)
T cd00692 164 PDELVALLA-----------AHSVAAQDF----------VDPSIA----------------------GTPFD-STPGVFD 199 (328)
T ss_pred HHHHhhhcc-----------cccccccCC----------CCCCCC----------------------CCCCC-CCcchhc
Confidence 999999999 999999982 377664 12577 5999999
Q ss_pred hHHHHHhh-cCCC-------------------CcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhhCCCCCCC
Q 019129 269 NNYYRNIL-DNKG-------------------LMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGT 328 (346)
Q Consensus 269 N~Yy~nl~-~~~g-------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igvltg~ 328 (346)
|+||+|++ .+++ +|+||++|+.|++|+.+|++||+||++|+++|++||+||+++||.
T Consensus 200 n~Yf~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~--- 276 (328)
T cd00692 200 TQFFIETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD--- 276 (328)
T ss_pred HHHHHHHHHcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC---
Confidence 99999987 4555 499999999999999999999999999999999999999999986
Q ss_pred CCccccccccccCC
Q 019129 329 KGEIRKVCNLANKL 342 (346)
Q Consensus 329 ~GeiR~~C~~~n~~ 342 (346)
...+..|+.|++.
T Consensus 277 -~~~l~dcs~v~p~ 289 (328)
T cd00692 277 -NISLTDCSDVIPP 289 (328)
T ss_pred -cchhccCcccCCC
Confidence 3478899999964
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=1.9e-61 Score=454.46 Aligned_cols=219 Identities=29% Similarity=0.441 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHhCcchhhhhHHhhhccccc-------cCCCCccccccccCcccccccCCCCCcc-hHHHHHHHHHHHH
Q 019129 47 DIIREQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDASLLLDSTRKTLSEKEMDRSFGMR-NFRYIENIKEAVE 118 (346)
Q Consensus 47 ~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgSilld~t~~~~~E~~~~~N~~L~-g~~~I~~iK~~le 118 (346)
+-+++.+.+.+ .+...+|.+|||+||||.+ +||||||+++ .|+++++|.||+ ++++|++||+++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~- 89 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF- 89 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc-
Confidence 44577777766 4578999999999999975 7999999863 699999999996 999999999998
Q ss_pred hhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeecc
Q 019129 119 RECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGL 198 (346)
Q Consensus 119 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG~ 198 (346)
++|||||||+||+|+||+.+|||.|+|++||+|+..+.+ +++||+|+.+++++++.|+++||+++|||||+|
T Consensus 90 ----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsG- 161 (251)
T PLN02879 90 ----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALSG- 161 (251)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeec-
Confidence 479999999999999999999999999999999998854 568999999999999999999999999999999
Q ss_pred cccccccccccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCCccChHHHHHhhcC
Q 019129 199 SYYYWSISSGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDN 278 (346)
Q Consensus 199 ~~~~~~~s~gaHTiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp~~FDN~Yy~nl~~~ 278 (346)
|||||++||. |. + . .+ .+| .||.+|||+||++|+.+
T Consensus 162 ----------aHTiG~ah~~----r~-g-----~---------------~g--------~~d-~tp~~FDN~Yy~~ll~~ 197 (251)
T PLN02879 162 ----------GHTLGRCHKE----RS-G-----F---------------EG--------AWT-PNPLIFDNSYFKEILSG 197 (251)
T ss_pred ----------cccccccccc----cc-c-----C---------------CC--------CCC-CCccceeHHHHHHHHcC
Confidence 9999999995 31 1 0 11 123 58999999999999999
Q ss_pred --CCC--cccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhhCCCC
Q 019129 279 --KGL--MMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 325 (346)
Q Consensus 279 --~gl--L~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igvl 325 (346)
+|+ |+||++|+.|++|+++|++||.||++||++|++||+||+++|+.
T Consensus 198 ~~~gll~L~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 198 EKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred CcCCCccchhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 898 67999999999999999999999999999999999999999985
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=1.9e-58 Score=435.43 Aligned_cols=223 Identities=31% Similarity=0.487 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHhCcchhhhhHHhhhcccccc--------CCCCccccccccCcccccccCCCCCc-chHHHHHHHHHHHH
Q 019129 48 IIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ--------SCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVE 118 (346)
Q Consensus 48 iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~--------GcDgSilld~t~~~~~E~~~~~N~~L-~g~~~I~~iK~~le 118 (346)
.|++.|++.+.+++.+++++|||+||||++. ||||||+++ +|+++++|.+| +++++|++||+++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999996 999999996 39999999997 99999999999999
Q ss_pred hhCCCCCchhhHHHhhhcchhhhc--CCCCccccCCCCCCCCCc--hhhhhccCCCCCCCHHHHHHHHHHcCCCccccee
Q 019129 119 RECPGVVSCADILVLSGRDGVVAL--GGPYIPLKTGRRDGRKSR--AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVA 194 (346)
Q Consensus 119 ~~cp~~VScADilalAar~av~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVa 194 (346)
. |++|||||||++|+++||+.+ |||.|+|++||+|+..+. ...+..++|.|..+++++++.|.++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999764 3334567888888999999999999999999999
Q ss_pred ee-cccccccccccccccc-cccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCCccChHHH
Q 019129 195 LL-GLSYYYWSISSGSHSV-GRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYY 272 (346)
Q Consensus 195 Ls-G~~~~~~~~s~gaHTi-G~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp~~FDN~Yy 272 (346)
|+ | |||+ |++||..+..|+ |+ +|+.||.+|||+||
T Consensus 154 L~~G-----------aHti~G~~~~~~~~~~~-------------------~~-------------~~~~tp~~fDN~yy 190 (255)
T cd00314 154 LSAG-----------AHTLGGKNHGDLLNYEG-------------------SG-------------LWTSTPFTFDNAYF 190 (255)
T ss_pred hccC-----------CeeccCcccCCCCCccc-------------------CC-------------CCCCCCCccchHHH
Confidence 99 8 9999 999998775553 21 23369999999999
Q ss_pred HHhhcCC----------------CCcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhh
Q 019129 273 RNILDNK----------------GLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 321 (346)
Q Consensus 273 ~nl~~~~----------------glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 321 (346)
++|+.++ ++|+||++|+.|++|+.+|++||.|+++|+++|++||+||++
T Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 191 KNLLDMNWEWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred HHHhcCCcccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 9999988 899999999999999999999999999999999999999974
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=5e-56 Score=438.11 Aligned_cols=259 Identities=19% Similarity=0.268 Sum_probs=229.1
Q ss_pred HHHHHHHHHHHHhC--------cchhhhhHHhhhccccc-------cCCC-CccccccccCcccccccCCCCCc-chHHH
Q 019129 47 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFRY 109 (346)
Q Consensus 47 ~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSilld~t~~~~~E~~~~~N~~L-~g~~~ 109 (346)
+.|++.|++.+... ...+|.+|||+|||+.+ +|++ |+|.++ +|++++.|.+| +++.+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLDKARRL 118 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHHHHHHH
Confidence 68899999998864 47999999999999987 6886 788764 69999999999 78999
Q ss_pred HHHHHHHHHhhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchh---------------------------
Q 019129 110 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE--------------------------- 162 (346)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~--------------------------- 162 (346)
+++||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 119 L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a 194 (409)
T cd00649 119 LWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAA 194 (409)
T ss_pred HHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhh
Confidence 99999998 55699999999999999999999999999999999754320
Q ss_pred --------hhhc--cCCCCCCCHHHHHHHHHHcCCCcccceee-ecccccccccccccccccccccccccccccCCCCCC
Q 019129 163 --------ILEQ--YLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGLSYYYWSISSGSHSVGRTHCVKLVHRLYPEVDPA 231 (346)
Q Consensus 163 --------~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sG~~~~~~~~s~gaHTiG~~hc~~f~~Rly~~~dp~ 231 (346)
.+++ .||+|..++.+|++.|++||||++||||| +| |||||++||..|.+|+. +||.
T Consensus 195 ~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sG-----------AHTiGkaHc~~~~~rlg--~dP~ 261 (409)
T cd00649 195 VQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAG-----------GHTFGKTHGAGPASHVG--PEPE 261 (409)
T ss_pred hhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccC-----------CcceeecCcccccccCC--CCCC
Confidence 0223 69999999999999999999999999999 59 99999999999999984 7999
Q ss_pred CCcchhHHhh--hcCCCCCCCCCCccccccC---CCCCCccChHHHHHhhc-----------------------------
Q 019129 232 LNPDHVPHML--HKCPDAIPDPKAVQYVRND---RGTPMVLDNNYYRNILD----------------------------- 277 (346)
Q Consensus 232 ~d~~~~~~L~--~~Cp~~~~~~~~~~~~~lD---~~Tp~~FDN~Yy~nl~~----------------------------- 277 (346)
+++.|+..|+ .+||...++.+. ...+| ..||.+|||+||++|+.
T Consensus 262 ~~~~~~~gLgw~~~Cp~g~g~~t~--~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~ 339 (409)
T cd00649 262 AAPIEQQGLGWKNSYGTGKGKDTI--TSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDA 339 (409)
T ss_pred cCHHHHHhhcccccCCCCCCCCCc--cccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCc
Confidence 9999999995 899972232332 45788 47999999999999998
Q ss_pred -------CCCCcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHH--hhCCCCCCCCC
Q 019129 278 -------NKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLL--SENNPLTGTKG 330 (346)
Q Consensus 278 -------~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~igvltg~~G 330 (346)
++|||+||++|+.|++|+++|++||.|+++||++|++||+|| +.+||++-..|
T Consensus 340 ~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 340 HDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999999999999999999999999999999 69999987666
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=2.8e-53 Score=441.99 Aligned_cols=258 Identities=19% Similarity=0.258 Sum_probs=224.7
Q ss_pred HHHHHHHHHHHHhC--------cchhhhhHHhhhccccc-------cCCC-CccccccccCcccccccCCCCCc-chHHH
Q 019129 47 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFRY 109 (346)
Q Consensus 47 ~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSilld~t~~~~~E~~~~~N~~L-~g~~~ 109 (346)
+.|+++|++.+... ...+|.+|||+||++.+ +||+ |+|.+ .+|++++.|.+| +++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf------~P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRF------APLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceec------ccccCchhhhhHHHHHHH
Confidence 57899999998864 47999999999999987 6884 67776 479999999999 78999
Q ss_pred HHHHHHHHHhhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCc-----------------------------
Q 019129 110 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR----------------------------- 160 (346)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~----------------------------- 160 (346)
+++||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 129 L~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 9999886 7999999999999999999999999999999999994321
Q ss_pred --------hhhhhccCCCCCCCHHHHHHHHHHcCCCcccceeee-cccccccccccccccccccccccccccccCCCCCC
Q 019129 161 --------AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GLSYYYWSISSGSHSVGRTHCVKLVHRLYPEVDPA 231 (346)
Q Consensus 161 --------~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-G~~~~~~~~s~gaHTiG~~hc~~f~~Rly~~~dp~ 231 (346)
+.++ ..+|+|..++.+|++.|++||||++|||||+ | |||||++||.+|.+|+ ++||+
T Consensus 205 ~~Gliyvnpeg~-~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaG-----------aHTiGkaHc~s~~~rl--g~dP~ 270 (716)
T TIGR00198 205 EMGLIYVNPEGP-DGHPDPLCTAQDIRTTFARMGMNDEETVALIAG-----------GHTVGKCHGAGPAELI--GPDPE 270 (716)
T ss_pred hccccccCcccc-cCCCCCCCCHHHHHHHHHHcCCChHHHeeeecC-----------ceeccccCCCcccccC--CCCCC
Confidence 1111 2699999999999999999999999999996 7 9999999999999998 58999
Q ss_pred CCcchhHHhhhcCCCC-C-CCCCCccccccC---CCCCCccChHHHHHhhcC----------------------------
Q 019129 232 LNPDHVPHMLHKCPDA-I-PDPKAVQYVRND---RGTPMVLDNNYYRNILDN---------------------------- 278 (346)
Q Consensus 232 ~d~~~~~~L~~~Cp~~-~-~~~~~~~~~~lD---~~Tp~~FDN~Yy~nl~~~---------------------------- 278 (346)
+++.|++.|+.+||.. + +.++. ...+| ..||.+|||+||+||+.+
T Consensus 271 ~~~~~~~gLg~~c~~~~g~g~dt~--~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~ 348 (716)
T TIGR00198 271 GAPIEEQGLGWHNQYGKGVGRDTM--TSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVED 348 (716)
T ss_pred cCHHHHHHhcccCCCCCCCCCCcc--cccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccc
Confidence 9999999999999852 2 22222 45677 579999999999999975
Q ss_pred ------CCCcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHh--hCCCCCCCCC
Q 019129 279 ------KGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLS--ENNPLTGTKG 330 (346)
Q Consensus 279 ------~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~igvltg~~G 330 (346)
.++|+||++|..|++++++|++||.|+++|+++|++||+||+ .+|++....|
T Consensus 349 ~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y~g 408 (716)
T TIGR00198 349 PNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRYIG 408 (716)
T ss_pred cccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhhcC
Confidence 689999999999999999999999999999999999999998 5777654444
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=8.7e-50 Score=413.93 Aligned_cols=258 Identities=18% Similarity=0.268 Sum_probs=224.8
Q ss_pred HHHHHHHHHHHHhC--------cchhhhhHHhhhccccc-------cCCC-CccccccccCcccccccCCCCCc-chHHH
Q 019129 47 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFRY 109 (346)
Q Consensus 47 ~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSilld~t~~~~~E~~~~~N~~L-~g~~~ 109 (346)
+.|+++|.+.+... ...+|.+|||+||++.+ +||+ |+|.+ .+|++++.|.+| +++.+
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf------~pe~~w~~N~gL~ka~~~ 130 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------APLNSWPDNVNLDKARRL 130 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC------cccccchhhhhHHHHHHH
Confidence 57999999998864 47999999999999987 6886 67876 479999999999 78999
Q ss_pred HHHHHHHHHhhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchh---------------------------
Q 019129 110 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE--------------------------- 162 (346)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~--------------------------- 162 (346)
+++||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 131 L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~ 206 (726)
T PRK15061 131 LWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLA 206 (726)
T ss_pred HHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchh
Confidence 99999998 55799999999999999999999999999999998654321
Q ss_pred ------------hhhccCCCCCCCHHHHHHHHHHcCCCcccceeee-cccccccccccccccccccccccccccccCCCC
Q 019129 163 ------------ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GLSYYYWSISSGSHSVGRTHCVKLVHRLYPEVD 229 (346)
Q Consensus 163 ------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-G~~~~~~~~s~gaHTiG~~hc~~f~~Rly~~~d 229 (346)
++ ..+|+|..++.+|++.|++||||++|||||+ | |||||++||..|.+|+ ++|
T Consensus 207 a~~mgliyvnpegp-~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaG-----------gHT~GkaHca~~~~rl--gpd 272 (726)
T PRK15061 207 AVQMGLIYVNPEGP-NGNPDPLAAARDIRETFARMAMNDEETVALIAG-----------GHTFGKTHGAGDASHV--GPE 272 (726)
T ss_pred hhhccceecCCCCC-CCCCCcccCHHHHHHHHHHcCCCHHHheeeccC-----------CceeeeCCCcCccccc--CCC
Confidence 11 1389999999999999999999999999995 8 9999999999999998 589
Q ss_pred CCCCcchhHHhh--hcCCCCCCCCCCccccccC---CCCCCccChHHHHHhhcC--------------------------
Q 019129 230 PALNPDHVPHML--HKCPDAIPDPKAVQYVRND---RGTPMVLDNNYYRNILDN-------------------------- 278 (346)
Q Consensus 230 p~~d~~~~~~L~--~~Cp~~~~~~~~~~~~~lD---~~Tp~~FDN~Yy~nl~~~-------------------------- 278 (346)
|.+++.+.+.|. .+||...+.++. ...+| ..||.+|||+||++|+.+
T Consensus 273 P~~a~~~~qgLgw~~~c~~g~g~dt~--tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~p 350 (726)
T PRK15061 273 PEAAPIEEQGLGWKNSYGSGKGADTI--TSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVP 350 (726)
T ss_pred CCcCHHHHHhccccccCCCCCCCCCc--cccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCC
Confidence 999999999985 899972222332 45688 579999999999999984
Q ss_pred ----------CCCcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHH--hhCCCCCCCCC
Q 019129 279 ----------KGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLL--SENNPLTGTKG 330 (346)
Q Consensus 279 ----------~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~igvltg~~G 330 (346)
.+||+||++|..||+++++|++||.|+++|+++|++||+|| ..+|+++...|
T Consensus 351 d~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 351 DAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred cccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 58999999999999999999999999999999999999999 45777765544
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.7e-48 Score=367.03 Aligned_cols=215 Identities=21% Similarity=0.326 Sum_probs=178.2
Q ss_pred HHHHHhCcchhhhhHHhhhcccc-------ccCCCCccccccccCcccccc-cCCCCCcchHHHHHHHHHHHHhhCCCCC
Q 019129 54 KLLYKRHKNTAFSWLRNIFHDCA-------VQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVV 125 (346)
Q Consensus 54 ~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSilld~t~~~~~E~~-~~~N~~L~g~~~I~~iK~~le~~cp~~V 125 (346)
......++.++++||||+||||| ++||||||+++.+ .+|+. .+.|.+|++|+.|+.+ +|
T Consensus 32 ~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l~~~~~i~~~----------~V 98 (264)
T cd08201 32 DCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTLNFFVNFYSP----------RS 98 (264)
T ss_pred ccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhccccceeeccC----------cc
Confidence 33445788999999999999999 7899999999743 46777 5666778888877543 59
Q ss_pred chhhHHHhhhcchhhhcCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeeccccccccc
Q 019129 126 SCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGLSYYYWSI 205 (346)
Q Consensus 126 ScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG~~~~~~~~ 205 (346)
|||||||||+|+||+.+|||.|+|++||+|++.+.+. .||.|+.++++|++.|+++||+++|||+|+|
T Consensus 99 ScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsg-------- 166 (264)
T cd08201 99 SMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVA-------- 166 (264)
T ss_pred CHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeec--------
Confidence 9999999999999999999999999999999988754 4999999999999999999999999999994
Q ss_pred ccccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCCccChHHHHHhhcCC--C---
Q 019129 206 SSGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNK--G--- 280 (346)
Q Consensus 206 s~gaHTiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD~~Tp~~FDN~Yy~nl~~~~--g--- 280 (346)
||||||++||..|.++. +|.. ..+. ..++| .||.+|||+||.+++.+. +
T Consensus 167 --gaHTiG~ahc~~f~~~~----~~g~-----------------~~~~--~~p~d-stp~~FDn~~f~E~l~g~~~~~L~ 220 (264)
T cd08201 167 --CGHTLGGVHSEDFPEIV----PPGS-----------------VPDT--VLQFF-DTTIQFDNKVVTEYLSGTTNNPLV 220 (264)
T ss_pred --CCeeeeecccccchhhc----CCcc-----------------ccCC--CCCCC-CCccccchHHHHHHhcCCCCCcee
Confidence 19999999999886653 1110 0001 23567 699999999999999764 2
Q ss_pred -----CcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhh
Q 019129 281 -----LMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 321 (346)
Q Consensus 281 -----lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 321 (346)
.+.||..+++.+.... ++.+| +++.|.+.++..+.||.+
T Consensus 221 ~~~~~~~~sd~r~f~~d~n~t-~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 221 VGPNNTTNSDLRIFSSDGNVT-MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred ecCCCCccchhhheecCccHH-HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 4589999998766554 57777 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1e-39 Score=311.07 Aligned_cols=220 Identities=20% Similarity=0.309 Sum_probs=181.8
Q ss_pred HHHHHHHHhCcchhhhhHHhhhccccc-------cCCCCc-cccccccCcccccccCCCCC--c-chHHHHHHHHHHHHh
Q 019129 51 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRSFG--M-RNFRYIENIKEAVER 119 (346)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-illd~t~~~~~E~~~~~N~~--L-~g~~~I~~iK~~le~ 119 (346)
+.+++.+.......+.||||+||++.+ +|++|+ |.| .+|++++.|.+ | +.+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 677888888888999999999999987 699998 766 47999999998 8 689999999999832
Q ss_pred -hCCC-CCchhhHHHhhhcchhhhcCC-----CCccccCCCCCCCCCchhhh--hccCCCCC------------CCHHHH
Q 019129 120 -ECPG-VVSCADILVLSGRDGVVALGG-----PYIPLKTGRRDGRKSRAEIL--EQYLPDHN------------DSMSVV 178 (346)
Q Consensus 120 -~cp~-~VScADilalAar~av~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 178 (346)
.-++ .||+||+|+||+..|||.+|| |.|++.+||.|...+..... ...+|.+. ...++|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 1122 699999999999999999999 99999999999987643211 12345432 235789
Q ss_pred HHHHHHcCCCcccceeeecccccccccccccc-cccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCcccc
Q 019129 179 LERFAAIGIDAPGLVALLGLSYYYWSISSGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYV 257 (346)
Q Consensus 179 ~~~F~~~Gl~~~dlVaLsG~~~~~~~~s~gaH-TiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~ 257 (346)
++.|.++|||++|||||+| || ++|++|..++ .|.|+
T Consensus 171 rd~f~rlglsd~EmvaL~G-----------g~r~lG~~~~~s~---------------------------~G~wT----- 207 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVG-----------GLRVLGANYGGSK---------------------------HGVFT----- 207 (297)
T ss_pred HHHHHhCCCChHHHhheec-----------chhhcccCCCCCC---------------------------CCCCc-----
Confidence 9999999999999999999 97 7998884321 12244
Q ss_pred ccCCCCCCccChHHHHHhhcCC--------------------C-----CcccccccccCCChHHHHHHHhhC--HHHHHH
Q 019129 258 RNDRGTPMVLDNNYYRNILDNK--------------------G-----LMMVDHQLATDKRTRPYVKKMAKS--QDYFFK 310 (346)
Q Consensus 258 ~lD~~Tp~~FDN~Yy~nl~~~~--------------------g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~F~~ 310 (346)
.+|.+|||.||+||+... | .+.+|..|.+|++.|++|+.||.| +++||+
T Consensus 208 ----~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~ 283 (297)
T cd08200 208 ----DRPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVK 283 (297)
T ss_pred ----CCCCccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHH
Confidence 489999999999999520 2 267899999999999999999998 999999
Q ss_pred HHHHHHHHHhhCC
Q 019129 311 EFSRAITLLSENN 323 (346)
Q Consensus 311 ~Fa~Am~Km~~ig 323 (346)
||++||.|++++.
T Consensus 284 DF~~A~~Klmeld 296 (297)
T cd08200 284 DFVAAWTKVMNLD 296 (297)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.1e-34 Score=302.82 Aligned_cols=220 Identities=21% Similarity=0.334 Sum_probs=178.0
Q ss_pred HHHHHHHHH---HHhCcchhhhhHHhhhccccc-------cCCCCc-cccccccCcccccccCCC--CCc-chHHHHHHH
Q 019129 48 IIREQVKLL---YKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRS--FGM-RNFRYIENI 113 (346)
Q Consensus 48 iVr~~v~~~---~~~~~~~aa~llRL~FHDcfv-------~GcDgS-illd~t~~~~~E~~~~~N--~~L-~g~~~I~~i 113 (346)
+|+++|... +.......+.|||++||++.+ +|++|+ |.|. +|++++.| .+| +.+.++|+|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 446665553 556677889999999999987 699998 7774 69999999 799 789999999
Q ss_pred HHHHHhhCCCCCchhhHHHhhhcchhhhc---CCC--CccccCCCCCCCCCchhhhhccC---C--CC----------CC
Q 019129 114 KEAVERECPGVVSCADILVLSGRDGVVAL---GGP--YIPLKTGRRDGRKSRAEILEQYL---P--DH----------ND 173 (346)
Q Consensus 114 K~~le~~cp~~VScADilalAar~av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~l---P--~p----------~~ 173 (346)
|+++.. ..||+||+|+||+..|||.+ ||| .|++.+||.|....... ++... | +. ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td-~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTD-AESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCC-ccccccCCCCCcccchhccccccCC
Confidence 999831 26999999999999999999 998 58999999999876422 22211 2 21 12
Q ss_pred CHHHHHHHHHHcCCCcccceeeeccccccccccccc-ccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCC
Q 019129 174 SMSVVLERFAAIGIDAPGLVALLGLSYYYWSISSGS-HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPK 252 (346)
Q Consensus 174 ~~~~l~~~F~~~Gl~~~dlVaLsG~~~~~~~~s~ga-HTiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~ 252 (346)
..+.|++.|.++|||++|||||+| | |++|++|..++ .|.++
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~G-----------g~r~lG~~~~~s~---------------------------~G~~T 620 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIG-----------GMRVLGANHGGSK---------------------------HGVFT 620 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheec-----------chhhccccCCCCC---------------------------CCCCc
Confidence 456789999999999999999999 7 59999985321 12243
Q ss_pred CccccccCCCCCCccChHHHHHhhcCC--------------------C---Cc--ccccccccCCChHHHHHHHhhCH--
Q 019129 253 AVQYVRNDRGTPMVLDNNYYRNILDNK--------------------G---LM--MVDHQLATDKRTRPYVKKMAKSQ-- 305 (346)
Q Consensus 253 ~~~~~~lD~~Tp~~FDN~Yy~nl~~~~--------------------g---lL--~SD~~L~~d~~t~~~V~~yA~d~-- 305 (346)
.+|.+|||.||+||+... | ++ .+|..|.+|++.|++|+.||+|+
T Consensus 621 ---------~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~ 691 (716)
T TIGR00198 621 ---------DRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAR 691 (716)
T ss_pred ---------CCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhccccc
Confidence 489999999999999721 2 22 67999999999999999999997
Q ss_pred HHHHHHHHHHHHHHhhCCC
Q 019129 306 DYFFKEFSRAITLLSENNP 324 (346)
Q Consensus 306 ~~F~~~Fa~Am~Km~~igv 324 (346)
++||+||++||.|+++++-
T Consensus 692 ~~F~~DF~~Aw~Klm~ldr 710 (716)
T TIGR00198 692 EKFVKDFVAAWTKVMNLDR 710 (716)
T ss_pred chHHHHHHHHHHHHHhCCC
Confidence 8999999999999999874
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3e-34 Score=298.28 Aligned_cols=221 Identities=18% Similarity=0.302 Sum_probs=182.4
Q ss_pred HHHHHHHHhCcchhhhhHHhhhccccc-------cCCCCc-cccccccCcccccccCCCC--Cc-chHHHHHHHHHHHHh
Q 019129 51 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRSF--GM-RNFRYIENIKEAVER 119 (346)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-illd~t~~~~~E~~~~~N~--~L-~g~~~I~~iK~~le~ 119 (346)
..++..+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. +| +.++++|+||+++..
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 567788888888899999999999986 799998 8774 699999999 88 689999999999964
Q ss_pred hCC--CCCchhhHHHhhhcchhhhc---CC--CCccccCCCCCCCCCchhhh--hccCCCCC------------CCHHHH
Q 019129 120 ECP--GVVSCADILVLSGRDGVVAL---GG--PYIPLKTGRRDGRKSRAEIL--EQYLPDHN------------DSMSVV 178 (346)
Q Consensus 120 ~cp--~~VScADilalAar~av~~~---GG--P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 178 (346)
.-. ..||+||+|+||+..|||.+ || |.|++.+||.|.+....... ...+|.+. ...+.|
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L 595 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELL 595 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHH
Confidence 321 25999999999999999999 68 99999999999987543211 12456543 134789
Q ss_pred HHHHHHcCCCcccceeeecccccccccccccc-cccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCcccc
Q 019129 179 LERFAAIGIDAPGLVALLGLSYYYWSISSGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYV 257 (346)
Q Consensus 179 ~~~F~~~Gl~~~dlVaLsG~~~~~~~~s~gaH-TiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~ 257 (346)
++.|.++|||++|||||+| || ++|+.|..++ .|.++
T Consensus 596 ~d~a~~lglt~~EmvaL~G-----------g~r~Lg~~~~~S~---------------------------~G~~T----- 632 (726)
T PRK15061 596 VDKAQLLTLTAPEMTVLVG-----------GLRVLGANYGGSK---------------------------HGVFT----- 632 (726)
T ss_pred HHHHHhCCCChHHHhheec-----------chhhcccCCCCCC---------------------------CCCCc-----
Confidence 9999999999999999999 86 7898884321 12233
Q ss_pred ccCCCCCCccChHHHHHhhcCC--------------------C---C--cccccccccCCChHHHHHHHhhC--HHHHHH
Q 019129 258 RNDRGTPMVLDNNYYRNILDNK--------------------G---L--MMVDHQLATDKRTRPYVKKMAKS--QDYFFK 310 (346)
Q Consensus 258 ~lD~~Tp~~FDN~Yy~nl~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~ 310 (346)
.+|.+|||.||+||+... | + +.+|..|.+|++.|++|+.||.| +++||+
T Consensus 633 ----~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~ 708 (726)
T PRK15061 633 ----DRPGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVR 708 (726)
T ss_pred ----CCCCccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHH
Confidence 489999999999999521 1 1 47899999999999999999999 999999
Q ss_pred HHHHHHHHHhhCCC
Q 019129 311 EFSRAITLLSENNP 324 (346)
Q Consensus 311 ~Fa~Am~Km~~igv 324 (346)
||++||.|+++++-
T Consensus 709 DF~~Aw~Kvmeldr 722 (726)
T PRK15061 709 DFVAAWTKVMNLDR 722 (726)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.9e-30 Score=256.68 Aligned_cols=252 Identities=18% Similarity=0.268 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhC--------cchhhhhHHhhhccccc-------cCCCCccccccccCcccccccCCCCCc-chHHHHH
Q 019129 48 IIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIE 111 (346)
Q Consensus 48 iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcDgSilld~t~~~~~E~~~~~N~~L-~g~~~I~ 111 (346)
.|...+....... ...+|-+|||+||-+++ +|..+ +..+|.++.++|.|.+| +++.++.
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~-----G~qRFaPlnSWPDN~nLDKarRLLW 145 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGG-----GQQRFAPLNSWPDNANLDKARRLLW 145 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCC-----CceecccccCCCcccchHHHHHHhh
Confidence 4445555555443 35899999999999987 34433 23456789999999999 7999999
Q ss_pred HHHHHHHhhCCCCCchhhHHHhhhcchhhhcCCCCccccCCCCCCCCCch------------------------------
Q 019129 112 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA------------------------------ 161 (346)
Q Consensus 112 ~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~------------------------------ 161 (346)
+||+++ +..+|.||++.|++..|++.+|++.+.+..||.|-..+..
T Consensus 146 PIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 146 PIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred hHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 999998 6689999999999999999999999999999999876654
Q ss_pred --------hhhhccCCCCCCCHHHHHHHHHHcCCCcccceeeecccccccccccccccccccccccccccccCCCCCCCC
Q 019129 162 --------EILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGLSYYYWSISSGSHSVGRTHCVKLVHRLYPEVDPALN 233 (346)
Q Consensus 162 --------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG~~~~~~~~s~gaHTiG~~hc~~f~~Rly~~~dp~~d 233 (346)
+++ ...|+|..+..++++.|++|+++++|.|||++ |+||+|.+|...-.+-+ +++|.-.
T Consensus 222 MGLIYVNPEGp-ng~PDpl~aA~dIRetFaRMaMNDeETVALia----------GGHtfGKtHGag~a~~v--g~ePe~a 288 (730)
T COG0376 222 MGLIYVNPEGP-NGNPDPLAAARDIRETFARMAMNDEETVALIA----------GGHTFGKTHGAGPASNV--GPEPEAA 288 (730)
T ss_pred eeeEEeCCCCC-CCCCChhhhHHHHHHHHHHhcCCcHhhhhhhh----------cccccccccCCCchhhc--CCCcccc
Confidence 222 35789999999999999999999999999998 49999999976522222 4677544
Q ss_pred cchhHHhh--hcCCCCCCCCCCcc---ccccCCCCCCccChHHHHHhhcC------------------------------
Q 019129 234 PDHVPHML--HKCPDAIPDPKAVQ---YVRNDRGTPMVLDNNYYRNILDN------------------------------ 278 (346)
Q Consensus 234 ~~~~~~L~--~~Cp~~~~~~~~~~---~~~lD~~Tp~~FDN~Yy~nl~~~------------------------------ 278 (346)
+--.+.|- ..|-. +.+..+|+ -+.. ..||++|||+||.+|+..
T Consensus 289 ~ie~qGlGW~~~~g~-G~G~dtitsGlE~~W-t~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp 366 (730)
T COG0376 289 PIEQQGLGWANTYGS-GKGPDTITSGLEGAW-TTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDP 366 (730)
T ss_pred chhhhccccccccCC-CcCcccccccccccC-CCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCc
Confidence 44344442 33432 22222221 1222 368999999999999853
Q ss_pred -----CCCcccccccccCCChHHHHHHHhhCHHHHHHHHHHHHHHHhhCC
Q 019129 279 -----KGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENN 323 (346)
Q Consensus 279 -----~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ig 323 (346)
..||.+|.+|..||..++|.++|..|++.|.+.|++||.||..-+
T Consensus 367 ~~~~~p~MlttDlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 367 SKKHGPMMLTTDLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred ccccCceeeccchhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 148999999999999999999999999999999999999998644
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.68 E-value=3.3e-16 Score=157.94 Aligned_cols=217 Identities=20% Similarity=0.321 Sum_probs=163.3
Q ss_pred HHHHHHHHhCcchhhhhHHhhhccccc-------cCCCCc-cccccccCcccccccCCCC--Cc-chHHHHHHHHHHHHh
Q 019129 51 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRSF--GM-RNFRYIENIKEAVER 119 (346)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-illd~t~~~~~E~~~~~N~--~L-~g~~~I~~iK~~le~ 119 (346)
..++..+.+..-....|+-.+|-.+-+ +|.+|. |.|. +.++++.|. -| +.+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 467788888888899999999998876 588875 6674 689999996 45 67899999988885
Q ss_pred hCCCCCchhhHHHhhhcchhhhc---CCCC--ccccCCCCCCCCCchhhhhc-cC-CC--C----------CCCHHHHHH
Q 019129 120 ECPGVVSCADILVLSGRDGVVAL---GGPY--IPLKTGRRDGRKSRAEILEQ-YL-PD--H----------NDSMSVVLE 180 (346)
Q Consensus 120 ~cp~~VScADilalAar~av~~~---GGP~--~~v~~GR~D~~~s~~~~~~~-~l-P~--p----------~~~~~~l~~ 180 (346)
..||.||+|+|++..+|+.+ +|-. +|+..||.|..........- .| |- . ..+.+-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 36999999999999999876 6655 56779999997654321100 01 11 1 123455778
Q ss_pred HHHHcCCCcccceeeecccccccccccccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccC
Q 019129 181 RFAAIGIDAPGLVALLGLSYYYWSISSGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRND 260 (346)
Q Consensus 181 ~F~~~Gl~~~dlVaLsG~~~~~~~~s~gaHTiG~~hc~~f~~Rly~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~lD 260 (346)
+-+-++|+..||++|+||++++ +-..|......|.+
T Consensus 602 kAqlL~LtapemtVLiGGlRvL------g~n~g~s~~GVfT~-------------------------------------- 637 (730)
T COG0376 602 KAQLLTLTAPEMTVLIGGLRVL------GANYGGSKHGVFTD-------------------------------------- 637 (730)
T ss_pred HHHHhccCCccceEEEcceEee------ccCCCCCccceecc--------------------------------------
Confidence 9899999999999999998888 55555554443333
Q ss_pred CCCCCccChHHHHHhhcC-------------------C-CC-----cccccccccCCChHHHHHHHhhC--HHHHHHHHH
Q 019129 261 RGTPMVLDNNYYRNILDN-------------------K-GL-----MMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFS 313 (346)
Q Consensus 261 ~~Tp~~FDN~Yy~nl~~~-------------------~-gl-----L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa 313 (346)
.|..+.|.||.||+.. + |- -..|..+-+++..|.+.+.||.| +++|.+||+
T Consensus 638 --~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFv 715 (730)
T COG0376 638 --RPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFV 715 (730)
T ss_pred --CcccccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHH
Confidence 4555666666666642 1 21 25788888889999999999975 889999999
Q ss_pred HHHHHHhhCC
Q 019129 314 RAITLLSENN 323 (346)
Q Consensus 314 ~Am~Km~~ig 323 (346)
+||.|..++.
T Consensus 716 aaw~kVMn~D 725 (730)
T COG0376 716 AAWTKVMNLD 725 (730)
T ss_pred HHHHHHhccc
Confidence 9999999875
No 19
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=65.08 E-value=5.9 Score=32.44 Aligned_cols=14 Identities=50% Similarity=0.607 Sum_probs=8.2
Q ss_pred CCchHHHHHHHHHH
Q 019129 1 MGTKAVFLLLALLS 14 (346)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (346)
|++|..|||.++++
T Consensus 1 MaSK~~llL~l~LA 14 (95)
T PF07172_consen 1 MASKAFLLLGLLLA 14 (95)
T ss_pred CchhHHHHHHHHHH
Confidence 89777554434443
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=42.67 E-value=21 Score=28.47 Aligned_cols=17 Identities=18% Similarity=0.169 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHhhCCC
Q 019129 308 FFKEFSRAITLLSENNP 324 (346)
Q Consensus 308 F~~~Fa~Am~Km~~igv 324 (346)
...+|..||.||+.+|.
T Consensus 3 m~~~F~~am~KlavLG~ 19 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGH 19 (80)
T ss_dssp HHHHHHHHHHHHCTTTS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 45799999999999875
No 21
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=39.11 E-value=66 Score=33.36 Aligned_cols=130 Identities=19% Similarity=0.291 Sum_probs=76.4
Q ss_pred ccccccCCCCCcchHHHHHHHHHHHHh---hCCCCCchhhHHHhhhcchhhhcCCC-Ccc-----ccCCCCCCCCCchhh
Q 019129 93 LSEKEMDRSFGMRNFRYIENIKEAVER---ECPGVVSCADILVLSGRDGVVALGGP-YIP-----LKTGRRDGRKSRAEI 163 (346)
Q Consensus 93 ~~E~~~~~N~~L~g~~~I~~iK~~le~---~cp~~VScADilalAar~av~~~GGP-~~~-----v~~GR~D~~~s~~~~ 163 (346)
.+......|.||+ .++.-||+++.. .|| +.-..+.++|. |+...|.- -|| .+.|---.. .-...
T Consensus 320 sPgtArRg~FGLP--RV~~ImkeEv~~~~~~~p--~~k~~l~ala~--a~kflg~~~iYP~~iG~~~iGDAHW~-~l~~s 392 (505)
T PF10113_consen 320 SPGTARRGNFGLP--RVMKIMKEEVANGLTPVP--AQKEELEALAK--AVKFLGYENIYPNKIGGTYIGDAHWA-CLPNS 392 (505)
T ss_pred CCCccccccCCcH--HHHHHHHHHHhcCCCccc--ccHHHHHHHHH--HHhhcCcccccccccccEecccceee-eecCc
Confidence 4566677888995 577788888843 344 67777777765 44555543 233 223322221 11111
Q ss_pred hhccCCCCCCCHHHHHHHHHHcCCCcccceeeeccccccccccccccccccccccccccccc-CCCCCCCCcchhHHhhh
Q 019129 164 LEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGLSYYYWSISSGSHSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLH 242 (346)
Q Consensus 164 ~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG~~~~~~~~s~gaHTiG~~hc~~f~~Rly-~~~dp~~d~~~~~~L~~ 242 (346)
+..+-+....+++++ ..|. .-|-|+|+|||++.|.+ |..+-.. .+.+| ...||.....-.+.|+.
T Consensus 393 ~l~~~~~~~kt~~~i-----~~~~-~~~kv~llGgRfisW~i---A~~Ld~~-----vdei~ISD~DpwVE~~TV~~L~~ 458 (505)
T PF10113_consen 393 PLYERVNVKKTLDDI-----ENGV-NGDKVGLLGGRFISWGI---AKKLDGL-----VDEIYISDADPWVEKATVKNLNE 458 (505)
T ss_pred hhhhcccccccHHHH-----hhcc-ccceeeeeccchhHHHH---HHhhccc-----cceEEEecCcHHHHHHHHHHHHh
Confidence 122345556677777 2333 46789999999999999 7765432 23333 24577766666666654
Q ss_pred c
Q 019129 243 K 243 (346)
Q Consensus 243 ~ 243 (346)
.
T Consensus 459 ~ 459 (505)
T PF10113_consen 459 E 459 (505)
T ss_pred h
Confidence 3
No 22
>KOG0427 consensus Ubiquitin conjugating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=24.93 E-value=30 Score=30.15 Aligned_cols=43 Identities=23% Similarity=0.269 Sum_probs=27.6
Q ss_pred HHHHHHHhhhhcccccCCCCCCcCccccCCccHHHHHHHHHHHHHHhCcchhhhhHHhhhcc
Q 019129 13 LSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHD 74 (346)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHD 74 (346)
.|+.+.+-.+++.+- .......+|-++|-+.. .|.=.|-+|||
T Consensus 116 vClSIlSMLSSs~eK--qrP~Dn~~Yvk~C~~gr-----------------sPk~TrWwfHD 158 (161)
T KOG0427|consen 116 VCLSILSMLSSSKEK--QRPTDNDRYVKNCKNGR-----------------SPKETRWWFHD 158 (161)
T ss_pred HHHHHHHHHccCccc--cCCCccchhhhhccCCC-----------------Ccccceeeecc
Confidence 355555555553222 33467889999997552 45567889998
No 23
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=22.19 E-value=62 Score=28.33 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHcCCCcccc-eeeecccccccccccccccccccc
Q 019129 173 DSMSVVLERFAAIGIDAPGL-VALLGLSYYYWSISSGSHSVGRTH 216 (346)
Q Consensus 173 ~~~~~l~~~F~~~Gl~~~dl-VaLsG~~~~~~~~s~gaHTiG~~h 216 (346)
+++.+.+-.|+++||++.++ |.|-- +|-||++.
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRD-----------shGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRD-----------SHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeec-----------ccCcchhh
Confidence 34566667899999999997 55556 99999886
No 24
>PLN00017 photosystem I reaction centre subunit VI; Provisional
Probab=22.03 E-value=43 Score=27.00 Aligned_cols=21 Identities=24% Similarity=0.368 Sum_probs=17.0
Q ss_pred HHhhCHHHHHHHHHHHHHHHh
Q 019129 300 KMAKSQDYFFKEFSRAITLLS 320 (346)
Q Consensus 300 ~yA~d~~~F~~~Fa~Am~Km~ 320 (346)
+|-..|.+||+.|+..+.|=+
T Consensus 37 rY~~~QskFFe~~A~~~tkR~ 57 (90)
T PLN00017 37 RYNPLQSKFFETFAAPFTKRG 57 (90)
T ss_pred CCChHHHHHHHHHhhhhhHHH
Confidence 366779999999999887744
Done!