BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019135
MDDKGNLYVADTLNLAIRKIGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT
CSLLVIDRGNAALRQISLNQDDCEYQYNSISPTDILMVVGAVLVGYVTCMLQQGFGPFFF
SRTQQPSESEFNEETEIKELSNKEKPIPIVESMKEEPGWPSFGQLIIDLSKLALEAMGSM
FLNFVPFRFRSSGTKGNLTPLRDTLRMPEDEAAPPVVQRQKSAVPLSETHQVRTPGTGDK
YPDMKPPKIKSASFKDSSLSTKHRSSKRQEYAEFYGSGEVPPPYSKSKSQKERTRHRQRD
KSGELVYGVSGMEPKPVEMKPVDYDNLKFDHYNMRSKYGDDSYRF

High Scoring Gene Products

Symbol, full name Information P value
AT3G14860 protein from Arabidopsis thaliana 1.8e-101
AT1G70280 protein from Arabidopsis thaliana 1.5e-37
AT1G23880 protein from Arabidopsis thaliana 5.7e-36
AT5G14890 protein from Arabidopsis thaliana 4.6e-26
AT1G23890 protein from Arabidopsis thaliana 3.9e-20

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019135
        (345 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2099357 - symbol:AT3G14860 "AT3G14860" species...  1006  1.8e-101  1
TAIR|locus:2016189 - symbol:AT1G70280 "AT1G70280" species...   403  1.5e-37   1
TAIR|locus:2199862 - symbol:AT1G23880 "AT1G23880" species...   388  5.7e-36   1
TAIR|locus:2147780 - symbol:AT5G14890 species:3702 "Arabi...   304  4.6e-26   1
TAIR|locus:2199872 - symbol:AT1G23890 "AT1G23890" species...   249  3.9e-20   1


>TAIR|locus:2099357 [details] [associations]
            symbol:AT3G14860 "AT3G14860" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0000394 "RNA splicing, via
            endonucleolytic cleavage and ligation" evidence=RCA] [GO:0009086
            "methionine biosynthetic process" evidence=RCA] [GO:0009616 "virus
            induced gene silencing" evidence=RCA] [GO:0010050 "vegetative phase
            change" evidence=RCA] InterPro:IPR001258 Pfam:PF01436 EMBL:CP002686
            Gene3D:2.120.10.30 InterPro:IPR011042 IPI:IPI00527194
            RefSeq:NP_974315.1 UniGene:At.39155 UniGene:At.67703
            ProteinModelPortal:F4IXC9 SMR:F4IXC9 PRIDE:F4IXC9
            EnsemblPlants:AT3G14860.2 GeneID:820715 KEGG:ath:AT3G14860
            OMA:NIVRITP Uniprot:F4IXC9
        Length = 493

 Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
 Identities = 219/356 (61%), Positives = 259/356 (72%)

Query:     1 MDDKGNLYVADTLNLAIRKIGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT 60
             MDDKGN+YVADTLNLAIRKIGD+GVTTIAGGKSN+AG+RDGPSEDAKFSNDFDVVYVRPT
Sbjct:   157 MDDKGNVYVADTLNLAIRKIGDSGVTTIAGGKSNIAGYRDGPSEDAKFSNDFDVVYVRPT 216

Query:    61 CSLLVIDRGNAALRQISLNQDDCEYQYNS-ISPTDILMVVGAVLVGYVTCMLQQGFGPFF 119
             CSLLVIDRGNAALRQISL+++DC+YQ +S IS TDIL+V+GAVL+GY TCMLQQGFG  F
Sbjct:   217 CSLLVIDRGNAALRQISLSEEDCDYQDDSSISLTDILLVIGAVLIGYATCMLQQGFGNSF 276

Query:   120 FSRTQQPSESEFNEETEIKELSNKEKPIPIVESMKEEPGWPSFGQLIIDLSKLALEAMGS 179
             FS+TQ  SE+ + EE   KE     +P+      KEEPGWPSFGQL+ DL KLALE + S
Sbjct:   277 FSKTQVGSETSYEEEHPGKE--KLSRPVHEKTITKEEPGWPSFGQLLTDLCKLALEFITS 334

Query:   180 MFLNFVPFRFRSSGTKGNLTPLRDTLRMPEDEAAPPVVQRQKSAVPLSETHQVRTPGTGD 239
                + VP RF+   T  NL PL+D L MPEDE  PP VQR  +  P+SE+     P   D
Sbjct:   335 ---HLVPARFQ---TNPNLRPLKDRLIMPEDEQEPPRVQRHTAPAPISESRHAHLPKADD 388

Query:   240 KYPDMKPPKIKSAS-FKDSSLSTK--HR-SSKRQEYAEFYGSGEVPPPYSKSKSQKERTR 295
              YP+ K PK++S+S  KD +LS+   HR SSKRQ+YA+FY SGEV  P    K  KER+R
Sbjct:   389 SYPEHKTPKLRSSSVMKDPTLSSSKHHRTSSKRQDYAQFYASGEVAQP----KIHKERSR 444

Query:   296 HRQRDKSGELVYGVSGMEPKPVE---MKPVDYDNL-KFDHYNMRS-KYGDDS-YRF 345
              R RDK+ E        EPKP     +KPV+Y N  KFDHYNMRS KYG ++ +RF
Sbjct:   445 RRHRDKTTET-------EPKPTPSDTVKPVEYSNSSKFDHYNMRSSKYGPETPFRF 493


>TAIR|locus:2016189 [details] [associations]
            symbol:AT1G70280 "AT1G70280" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            [GO:0000394 "RNA splicing, via endonucleolytic cleavage and
            ligation" evidence=RCA] [GO:0009086 "methionine biosynthetic
            process" evidence=RCA] InterPro:IPR001258 Pfam:PF01436
            EMBL:CP002684 Gene3D:2.120.10.30 InterPro:IPR011042 IPI:IPI00535009
            RefSeq:NP_177185.3 UniGene:At.10660 ProteinModelPortal:F4I5D7
            SMR:F4I5D7 PRIDE:F4I5D7 EnsemblPlants:AT1G70280.2 GeneID:843364
            KEGG:ath:AT1G70280 OMA:EPYSIEV Uniprot:F4I5D7
        Length = 509

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 117/364 (32%), Positives = 188/364 (51%)

Query:     1 MDDKGNLYVADTLNLAIRKIGDAGVTTIAGGKS-NVAGFRDGPSEDAKFSNDFDVVYVRP 59
             +DD+GN+YVADT+N AIRKI + GVTTIAGGK+    G  DGPSEDAKFSNDFDVVYV  
Sbjct:   150 VDDRGNIYVADTVNNAIRKISEGGVTTIAGGKTVRNGGHVDGPSEDAKFSNDFDVVYVGS 209

Query:    60 TCSLLVIDRGNAALRQISLNQDDCEYQYNSISPTDILMVVGAVLVGYVTCMLQQGFGPFF 119
             +CSLLVIDRGN A+R+I L+ DDC YQY S  P  I ++V A   GY+  +LQ+  G   
Sbjct:   210 SCSLLVIDRGNKAIREIQLHFDDCAYQYGSGFPLGIAVLVAAGFFGYMLALLQRRVGSIV 269

Query:   120 FSRTQQPSESEFNEETEIKELSNKEKP-IPIVESM---KEEPGWPSFGQLIIDLSKLALE 175
              S   Q     F  + + K + +     IP  +     +EE    S G+L+ +  +  +E
Sbjct:   270 SSHNDQEM---FEADPDQKPMKHSRPSLIPAGDEQLEKQEETFVVSLGKLVSNAWESVME 326

Query:   176 AM-----GSMFLNFVPFRFRSSGTKGNLT-PLRDTLRMPEDEAAPPVVQRQKSAVPLSET 229
              +     G+ F  +     +S+    +   P++++  + +++  PPV  R  +  P  +T
Sbjct:   327 ILRKKQTGTSFQQYHGTTKQSAAFSTSTPWPIQESFVIRDEDGPPPVEPRNPT--P-RKT 383

Query:   230 HQVRTPGTGDKYPDMKPPKIKSASFKDSSLSTKHRSSKRQEYAEFYGSGEVPPPYSKSKS 289
             +   +    +K   ++  +   +S+ D+    + +  ++Q + +     +    + +  S
Sbjct:   384 YAFMSKDA-EKMQQLRQSRAFYSSW-DAEFPNQQQQQQKQ-HQKHQHQQQQQQQHRRHYS 440

Query:   290 QKERTRHRQ-RDKSGELVYG---------VSGMEPKPVE----MKPVDYDNLKFDHYNMR 335
                 T + Q  +KS E+V+G         V+  +PKP+E    M      NL +  +++ 
Sbjct:   441 SIPHTYYEQDSEKSNEIVFGAVQEQSSKRVAKPKPKPIESGDQMNNNTQQNLHYRSHSVS 500

Query:   336 SKYG 339
               YG
Sbjct:   501 YPYG 504


>TAIR|locus:2199862 [details] [associations]
            symbol:AT1G23880 "AT1G23880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009506 "plasmodesma"
            evidence=IDA] InterPro:IPR001258 Pfam:PF01436 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009506 Gene3D:2.120.10.30
            InterPro:IPR011042 UniGene:At.48224 EMBL:AY075650 EMBL:AY101522
            IPI:IPI00536861 RefSeq:NP_173800.2 ProteinModelPortal:Q8S9K1
            SMR:Q8S9K1 IntAct:Q8S9K1 PRIDE:Q8S9K1 EnsemblPlants:AT1G23880.1
            GeneID:838999 KEGG:ath:AT1G23880 TAIR:At1g23880 eggNOG:NOG147497
            HOGENOM:HOG000238931 InParanoid:Q8S9K1 OMA:IRKISEA PhylomeDB:Q8S9K1
            ProtClustDB:CLSN2915102 Genevestigator:Q8S9K1 Uniprot:Q8S9K1
        Length = 545

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 110/309 (35%), Positives = 158/309 (51%)

Query:     1 MDDKGNLYVADTLNLAIRKIGDAGVTTIAGGKS-NVAGFRDGPSEDAKFSNDFDVVYVRP 59
             +DD+GN+YVADT+N AIRKI +AGVTTIAGGK     G  DGPSEDAKFSNDFDVVY+  
Sbjct:   212 VDDRGNIYVADTVNNAIRKISEAGVTTIAGGKMVRGGGHVDGPSEDAKFSNDFDVVYLGS 271

Query:    60 TCSLLVIDRGNAALRQISLNQDDCEYQYNSISPTDILMVVGAVLVGYVTCMLQQGFGPFF 119
             +CSLLVIDRGN A+R+I L+ DDC  QY S  P  I ++V AV  GY+  +LQ+      
Sbjct:   272 SCSLLVIDRGNQAIREIQLHFDDCADQYGSGFPLGIAVLVAAVFFGYMLALLQRRLSSIV 331

Query:   120 FSRTQQPSESEFNEETEIKELSNKEKPIPIVESMKEEPGWPSF-GQLIIDLSK---LALE 175
                T Q       ++  IK +    +P  I+   ++E    SF G L I +S     ++E
Sbjct:   332 SYHTDQEVFEAVPDQDPIKPV----RPPLILTGDEQEKQEESFLGTLQIFISNAWVFSVE 387

Query:   176 AMGSMF----------LNFVPFRFRSSGTKGNLTPLRDTLRMPEDEAAPPVVQRQKSAVP 225
                 MF          LNF     + S       P++++  +   +  PPV  R  +A P
Sbjct:   388 LFSGMFPGLRKKQTVGLNFNHQETKHSAFSTTSWPIQESFVIHNKDEPPPVESR--NATP 445

Query:   226 LSETHQVRTPGTGDKYPDMKPPKIKSASFKDSSLSTKHRSSKRQEYAEFYGSGEVPPPYS 285
               + +   +    +K   ++  +    S  D+    + +  K Q+Y   + S     PY+
Sbjct:   446 -GKIYPFMSKDATEKMQQLRQSRALYRSL-DAEFLQEQQQEKHQQYHHRHHS---TIPYT 500

Query:   286 KSKSQKERT 294
               +   E+T
Sbjct:   501 LYEQSSEKT 509


>TAIR|locus:2147780 [details] [associations]
            symbol:AT5G14890 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006944
            "cellular membrane fusion" evidence=RCA] [GO:0009827 "plant-type
            cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
            growth" evidence=RCA] InterPro:IPR001258 Pfam:PF01436 EMBL:CP002688
            Gene3D:2.120.10.30 InterPro:IPR011042 IPI:IPI00528032
            RefSeq:NP_196993.2 UniGene:At.31869 ProteinModelPortal:F4K891
            SMR:F4K891 EnsemblPlants:AT5G14890.1 GeneID:831341
            KEGG:ath:AT5G14890 OMA:PISEMDA Uniprot:F4K891
        Length = 754

 Score = 304 (112.1 bits), Expect = 4.6e-26, P = 4.6e-26
 Identities = 83/251 (33%), Positives = 134/251 (53%)

Query:     1 MDDKGNLYVADTLNLAIRKIGDAGVTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRPT 60
             MDD+GN+YVADT+N+AIRKI D GV+TIA G     G ++   E  +FS+DFD++YV  +
Sbjct:   159 MDDRGNIYVADTINMAIRKISDDGVSTIAAGGRWSGGSKE---ESMRFSDDFDLIYVSSS 215

Query:    61 CSLLVIDRGNAALRQISLNQDDCEYQYNSISPTDI--LMVVGAVLVGYVTCMLQQGFGPF 118
             CSLLVIDRGN  +++I L+  DC           +   ++V AV  GY+  +L +     
Sbjct:   216 CSLLVIDRGNQLIKEIQLHDHDCSQPEPDTDSLHLGTALLVAAVFFGYMLALLVRRVRSL 275

Query:   119 FFSRTQQPSESEFNEETEIKELSNKEK---PI--PIV----ESMKEEPGWPSFGQLIIDL 169
             F S +   ++S+ +  T    ++  ++   P+  P++    ES KEE    S G+L++  
Sbjct:   276 F-SSSSHDTKSKRHVATPSMTMAPYQRYPRPVRQPLIPPQHESEKEEGFLGSLGKLVVKT 334

Query:   170 SKLALEAM-GSMFLNFVPFRFRS--SGTKGNLTPLRDTLRMPEDEAAPPVVQRQKSAVPL 226
                  E M GS   N +P  F       + N  P++++  +PE++  PP ++ +    P 
Sbjct:   335 GSSVSEMMSGSR--NVIPPNFHQYHHQQEPNQWPVQESFAIPEEDG-PPALEPRSGTNP- 390

Query:   227 SETHQVRTPGT 237
              +   +R  GT
Sbjct:   391 -DKPYLRAQGT 400


>TAIR|locus:2199872 [details] [associations]
            symbol:AT1G23890 "AT1G23890" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001258 Pfam:PF01436
            EMBL:CP002684 Gene3D:2.120.10.30 InterPro:IPR011042
            InterPro:IPR013017 PROSITE:PS51125 IPI:IPI00534532
            RefSeq:NP_973902.1 UniGene:At.15673 ProteinModelPortal:F4I7N5
            SMR:F4I7N5 PRIDE:F4I7N5 EnsemblPlants:AT1G23890.2 GeneID:839000
            KEGG:ath:AT1G23890 OMA:MIQANIM PhylomeDB:F4I7N5 ArrayExpress:F4I7N5
            Uniprot:F4I7N5
        Length = 400

 Score = 249 (92.7 bits), Expect = 3.9e-20, P = 3.9e-20
 Identities = 56/117 (47%), Positives = 74/117 (63%)

Query:     1 MDDKGNLYVADTLNLAIRKIGDAG-VTTIAGGKSNVAGFRDGPSEDAKFSNDFDVVYVRP 59
             +D KGN+YVAD  N AIRKI  +G VTTIAGG S   G RDGP+++A FS+DF++ +V  
Sbjct:   108 VDAKGNVYVADKSNKAIRKISSSGSVTTIAGGISKAFGHRDGPAQNATFSSDFEITFVPQ 167

Query:    60 TCSLLVIDRGNAALRQISLNQDDCEYQYNSISPTDILMVVGAVLVGYVTCMLQQGFG 116
              C LLV D GN  +RQI+L ++DC    +S   T  L  +G VL    +C+L    G
Sbjct:   168 RCCLLVSDHGNEMIRQINLKEEDCLENSHSNLGTYSLWSIGIVL----SCILGVAIG 220


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.133   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      345       345   0.00097  116 3  11 23  0.45    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  214 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  34.85u 0.19s 35.04t   Elapsed:  00:00:02
  Total cpu time:  34.85u 0.19s 35.04t   Elapsed:  00:00:02
  Start:  Tue May 21 05:19:42 2013   End:  Tue May 21 05:19:44 2013

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