Query 019139
Match_columns 345
No_of_seqs 138 out of 1380
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 07:01:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019139.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019139hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0022 Alcohol dehydrogenase, 100.0 1.8E-62 4E-67 431.5 32.8 339 5-343 3-341 (375)
2 COG1062 AdhC Zn-dependent alco 100.0 1.7E-62 3.8E-67 438.5 31.6 332 8-343 1-332 (366)
3 COG1064 AdhP Zn-dependent alco 100.0 1.2E-61 2.7E-66 441.9 30.6 302 7-343 1-304 (339)
4 KOG0023 Alcohol dehydrogenase, 100.0 2.4E-55 5.2E-60 388.4 26.6 317 1-343 1-322 (360)
5 KOG0024 Sorbitol dehydrogenase 100.0 5.5E-53 1.2E-57 374.3 28.2 307 9-345 4-318 (354)
6 PLN02740 Alcohol dehydrogenase 100.0 3.4E-50 7.4E-55 384.0 35.6 339 5-343 6-347 (381)
7 TIGR02818 adh_III_F_hyde S-(hy 100.0 4.3E-50 9.3E-55 381.6 34.9 333 10-343 2-334 (368)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 8.8E-50 1.9E-54 380.0 35.2 329 10-343 1-338 (371)
9 cd08300 alcohol_DH_class_III c 100.0 1.1E-49 2.3E-54 378.9 35.8 334 9-343 2-335 (368)
10 cd08301 alcohol_DH_plants Plan 100.0 9.9E-50 2.1E-54 379.3 35.5 336 8-343 1-336 (369)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.3E-48 5.1E-53 368.5 33.8 322 9-343 1-324 (358)
12 cd08277 liver_alcohol_DH_like 100.0 4.5E-48 9.8E-53 367.4 34.9 332 8-343 1-332 (365)
13 PLN02827 Alcohol dehydrogenase 100.0 1.5E-47 3.2E-52 365.2 35.3 330 8-343 11-342 (378)
14 cd08239 THR_DH_like L-threonin 100.0 1.1E-46 2.4E-51 354.2 32.7 302 10-343 1-305 (339)
15 COG1063 Tdh Threonine dehydrog 100.0 1.3E-46 2.7E-51 354.3 31.4 309 10-344 1-315 (350)
16 COG0604 Qor NADPH:quinone redu 100.0 1.6E-46 3.5E-51 349.4 29.4 283 10-343 1-292 (326)
17 PLN02586 probable cinnamyl alc 100.0 1.8E-45 3.9E-50 348.8 32.1 307 5-343 8-321 (360)
18 PRK09880 L-idonate 5-dehydroge 100.0 2.1E-45 4.5E-50 346.3 32.2 302 8-343 3-308 (343)
19 TIGR02819 fdhA_non_GSH formald 100.0 8.1E-45 1.7E-49 347.5 32.1 311 9-343 2-355 (393)
20 cd08299 alcohol_DH_class_I_II_ 100.0 5.2E-44 1.1E-48 340.4 36.0 332 8-342 6-338 (373)
21 cd08230 glucose_DH Glucose deh 100.0 1.8E-44 3.9E-49 341.5 31.2 300 10-342 1-317 (355)
22 PLN02178 cinnamyl-alcohol dehy 100.0 6.1E-44 1.3E-48 339.7 31.9 300 12-343 9-316 (375)
23 PLN02514 cinnamyl-alcohol dehy 100.0 1.4E-43 3E-48 335.6 32.8 315 1-343 1-318 (357)
24 TIGR03201 dearomat_had 6-hydro 100.0 9.4E-44 2E-48 335.8 31.5 300 13-343 2-315 (349)
25 cd05279 Zn_ADH1 Liver alcohol 100.0 4.2E-43 9E-48 333.4 35.1 331 10-343 1-332 (365)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.3E-43 5.1E-48 330.4 30.2 292 12-343 1-298 (329)
27 PRK10309 galactitol-1-phosphat 100.0 7.2E-43 1.6E-47 329.5 32.5 302 10-343 1-311 (347)
28 cd08233 butanediol_DH_like (2R 100.0 2.2E-42 4.7E-47 326.7 33.2 302 10-343 1-315 (351)
29 cd08278 benzyl_alcohol_DH Benz 100.0 1.2E-41 2.5E-46 323.4 34.6 330 8-343 1-333 (365)
30 cd08231 MDR_TM0436_like Hypoth 100.0 1.1E-41 2.4E-46 323.1 33.4 312 11-341 2-323 (361)
31 cd08285 NADP_ADH NADP(H)-depen 100.0 5.8E-41 1.2E-45 316.9 33.9 308 10-343 1-314 (351)
32 cd08237 ribitol-5-phosphate_DH 100.0 1.1E-41 2.5E-46 320.6 27.9 284 9-341 2-297 (341)
33 KOG1197 Predicted quinone oxid 100.0 3.5E-42 7.7E-47 294.8 21.9 283 5-342 4-296 (336)
34 cd08296 CAD_like Cinnamyl alco 100.0 1.2E-40 2.6E-45 312.6 31.8 299 10-342 1-301 (333)
35 cd08279 Zn_ADH_class_III Class 100.0 5.6E-40 1.2E-44 311.7 33.6 328 10-343 1-330 (363)
36 PRK10083 putative oxidoreducta 100.0 1.5E-39 3.2E-44 305.7 32.7 298 10-343 1-301 (339)
37 cd05284 arabinose_DH_like D-ar 100.0 2E-39 4.4E-44 304.8 31.8 301 10-343 1-308 (340)
38 cd05278 FDH_like Formaldehyde 100.0 3E-39 6.4E-44 304.4 32.5 307 10-343 1-311 (347)
39 cd08256 Zn_ADH2 Alcohol dehydr 100.0 8.5E-39 1.8E-43 302.0 33.1 302 10-343 1-317 (350)
40 cd08238 sorbose_phosphate_red 100.0 3.8E-39 8.3E-44 310.6 31.0 297 8-343 1-334 (410)
41 cd08260 Zn_ADH6 Alcohol dehydr 100.0 9.2E-39 2E-43 301.1 33.0 306 10-343 1-310 (345)
42 cd08283 FDH_like_1 Glutathione 100.0 1.3E-38 2.9E-43 304.6 33.4 322 10-343 1-350 (386)
43 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.5E-38 3.4E-43 300.2 31.8 304 10-343 1-317 (350)
44 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.5E-38 5.4E-43 293.6 32.2 300 10-341 1-306 (306)
45 cd08246 crotonyl_coA_red croto 100.0 1.7E-38 3.6E-43 304.7 31.2 309 6-342 9-358 (393)
46 cd08263 Zn_ADH10 Alcohol dehyd 100.0 5.7E-38 1.2E-42 298.3 33.9 327 10-343 1-333 (367)
47 cd08286 FDH_like_ADH2 formalde 100.0 5.6E-38 1.2E-42 295.7 32.5 302 10-342 1-307 (345)
48 TIGR03366 HpnZ_proposed putati 100.0 8.4E-39 1.8E-43 293.1 26.0 252 66-341 1-261 (280)
49 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.5E-38 3.2E-43 295.4 26.9 269 9-343 1-274 (308)
50 TIGR01751 crot-CoA-red crotony 100.0 7.4E-38 1.6E-42 300.7 30.9 310 5-342 3-353 (398)
51 KOG0025 Zn2+-binding dehydroge 100.0 5.1E-38 1.1E-42 273.9 25.2 286 4-343 14-318 (354)
52 cd08284 FDH_like_2 Glutathione 100.0 3.2E-37 6.9E-42 290.3 32.9 305 10-343 1-310 (344)
53 cd05283 CAD1 Cinnamyl alcohol 100.0 1.5E-37 3.3E-42 292.1 30.1 304 11-343 1-306 (337)
54 PRK09422 ethanol-active dehydr 100.0 3.6E-37 7.8E-42 289.3 31.6 301 10-343 1-304 (338)
55 PRK13771 putative alcohol dehy 100.0 1.9E-37 4.1E-42 290.7 29.6 298 10-343 1-300 (334)
56 PRK05396 tdh L-threonine 3-deh 100.0 4.5E-37 9.7E-42 289.2 32.2 300 10-341 1-305 (341)
57 PLN02702 L-idonate 5-dehydroge 100.0 6.6E-37 1.4E-41 290.7 33.1 305 8-343 16-327 (364)
58 cd08235 iditol_2_DH_like L-idi 100.0 7.4E-37 1.6E-41 287.7 33.1 302 10-342 1-309 (343)
59 cd08282 PFDH_like Pseudomonas 100.0 7.4E-37 1.6E-41 291.5 32.5 312 10-343 1-341 (375)
60 cd08261 Zn_ADH7 Alcohol dehydr 100.0 9.9E-37 2.1E-41 286.3 32.9 299 10-343 1-301 (337)
61 cd08287 FDH_like_ADH3 formalde 100.0 9.4E-37 2E-41 287.3 32.6 301 10-343 1-311 (345)
62 cd08291 ETR_like_1 2-enoyl thi 100.0 3.4E-37 7.4E-42 288.1 28.4 275 10-339 1-289 (324)
63 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.9E-36 4.1E-41 289.6 32.6 304 10-343 29-351 (384)
64 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.2E-36 4.8E-41 283.4 31.7 302 10-343 1-306 (338)
65 cd08297 CAD3 Cinnamyl alcohol 100.0 2.9E-36 6.4E-41 283.5 32.6 303 10-343 1-309 (341)
66 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4.8E-36 1E-40 282.1 31.5 291 10-343 1-307 (341)
67 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.8E-36 6.1E-41 281.7 29.7 291 10-340 1-294 (325)
68 cd08236 sugar_DH NAD(P)-depend 100.0 8E-36 1.7E-40 280.8 32.8 304 10-343 1-309 (343)
69 cd05285 sorbitol_DH Sorbitol d 100.0 6.2E-36 1.3E-40 281.7 31.9 298 12-342 1-306 (343)
70 cd08292 ETR_like_2 2-enoyl thi 100.0 3.2E-36 7E-41 280.8 29.6 278 10-343 1-292 (324)
71 cd05281 TDH Threonine dehydrog 100.0 8.9E-36 1.9E-40 280.5 32.0 300 10-342 1-306 (341)
72 cd08259 Zn_ADH5 Alcohol dehydr 100.0 9E-36 1.9E-40 278.4 31.5 297 10-342 1-299 (332)
73 cd08242 MDR_like Medium chain 100.0 1.2E-35 2.7E-40 276.8 31.2 284 10-343 1-285 (319)
74 cd08234 threonine_DH_like L-th 100.0 2.1E-35 4.7E-40 276.7 32.2 300 10-343 1-301 (334)
75 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.2E-35 4.7E-40 276.3 30.8 302 10-342 1-308 (342)
76 cd08298 CAD2 Cinnamyl alcohol 100.0 2.3E-35 4.9E-40 276.1 30.5 293 10-342 1-298 (329)
77 cd08245 CAD Cinnamyl alcohol d 100.0 4.4E-35 9.6E-40 274.2 30.4 297 11-342 1-299 (330)
78 PLN03154 putative allyl alcoho 100.0 4E-35 8.7E-40 276.8 29.5 281 6-343 5-312 (348)
79 cd08232 idonate-5-DH L-idonate 100.0 8.6E-35 1.9E-39 273.3 31.1 298 14-342 2-303 (339)
80 cd08295 double_bond_reductase_ 100.0 4.2E-35 9.1E-40 275.6 28.8 279 9-343 7-305 (338)
81 TIGR00692 tdh L-threonine 3-de 100.0 2.5E-34 5.5E-39 270.5 31.8 296 16-343 5-306 (340)
82 TIGR02825 B4_12hDH leukotriene 100.0 1E-34 2.2E-39 271.5 28.7 260 22-343 19-293 (325)
83 cd08294 leukotriene_B4_DH_like 100.0 1.3E-34 2.9E-39 270.6 28.7 272 9-343 2-296 (329)
84 cd08274 MDR9 Medium chain dehy 100.0 2.3E-34 5E-39 271.4 29.4 290 10-342 1-316 (350)
85 cd08293 PTGR2 Prostaglandin re 100.0 3E-34 6.5E-39 270.3 29.6 221 22-297 23-255 (345)
86 cd08290 ETR 2-enoyl thioester 100.0 3E-34 6.6E-39 269.7 27.5 282 10-343 1-305 (341)
87 TIGR02817 adh_fam_1 zinc-bindi 100.0 3.8E-34 8.3E-39 268.4 28.0 276 11-342 1-298 (336)
88 cd05188 MDR Medium chain reduc 100.0 3.1E-33 6.7E-38 253.2 27.4 268 36-338 1-271 (271)
89 PRK10754 quinone oxidoreductas 100.0 3.9E-33 8.4E-38 260.7 27.9 238 9-299 1-242 (327)
90 cd08244 MDR_enoyl_red Possible 100.0 1E-32 2.2E-37 257.0 30.5 279 10-342 1-290 (324)
91 PTZ00354 alcohol dehydrogenase 100.0 9.1E-33 2E-37 258.3 29.5 279 9-342 1-294 (334)
92 cd08276 MDR7 Medium chain dehy 100.0 2.6E-32 5.7E-37 255.3 32.0 297 10-342 1-302 (336)
93 cd08250 Mgc45594_like Mgc45594 100.0 9.6E-33 2.1E-37 258.2 28.6 277 9-342 1-294 (329)
94 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 5.3E-32 1.1E-36 252.4 29.9 263 10-324 1-271 (325)
95 cd08252 AL_MDR Arginate lyase 100.0 5.8E-32 1.3E-36 253.5 28.6 278 10-342 1-300 (336)
96 cd08249 enoyl_reductase_like e 100.0 7.5E-32 1.6E-36 253.6 27.6 243 10-299 1-257 (339)
97 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.7E-31 3.6E-36 247.6 29.6 269 16-342 2-276 (312)
98 cd08270 MDR4 Medium chain dehy 100.0 1.4E-31 3.1E-36 247.4 27.7 266 10-343 1-272 (305)
99 cd05282 ETR_like 2-enoyl thioe 100.0 1.3E-31 2.9E-36 249.4 27.5 266 22-342 14-290 (323)
100 cd08243 quinone_oxidoreductase 100.0 2.9E-31 6.3E-36 246.4 29.4 280 10-342 1-287 (320)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 2.1E-31 4.5E-36 248.8 27.8 261 10-322 1-269 (326)
102 TIGR02823 oxido_YhdH putative 100.0 4.4E-31 9.6E-36 246.3 29.6 260 11-323 1-268 (323)
103 cd05276 p53_inducible_oxidored 100.0 3E-30 6.4E-35 239.0 29.1 278 10-342 1-291 (323)
104 cd08248 RTN4I1 Human Reticulon 100.0 6.1E-31 1.3E-35 248.1 24.0 235 10-298 1-259 (350)
105 cd08288 MDR_yhdh Yhdh putative 100.0 5.2E-30 1.1E-34 239.1 29.1 279 10-341 1-290 (324)
106 cd08253 zeta_crystallin Zeta-c 100.0 6.4E-30 1.4E-34 237.2 29.0 263 10-323 1-269 (325)
107 cd05286 QOR2 Quinone oxidoredu 100.0 8.9E-30 1.9E-34 235.5 29.1 276 11-342 1-286 (320)
108 cd05288 PGDH Prostaglandin deh 100.0 7.2E-30 1.6E-34 238.6 27.7 275 10-343 2-298 (329)
109 KOG1198 Zinc-binding oxidoredu 100.0 1.4E-30 3.1E-35 242.9 22.7 222 22-297 20-256 (347)
110 COG2130 Putative NADP-dependen 100.0 9.2E-30 2E-34 224.4 25.8 264 22-343 27-305 (340)
111 cd08272 MDR6 Medium chain dehy 100.0 1.2E-29 2.6E-34 235.8 27.9 278 10-342 1-291 (326)
112 cd08271 MDR5 Medium chain dehy 100.0 1.9E-29 4.2E-34 234.7 28.4 237 10-298 1-241 (325)
113 cd08247 AST1_like AST1 is a cy 100.0 3E-29 6.6E-34 237.0 27.1 240 11-296 2-259 (352)
114 cd08273 MDR8 Medium chain dehy 100.0 4.2E-29 9.2E-34 233.5 27.6 231 11-299 2-236 (331)
115 TIGR02824 quinone_pig3 putativ 100.0 7.8E-29 1.7E-33 230.0 28.8 260 10-324 1-266 (325)
116 cd08268 MDR2 Medium chain dehy 100.0 1.6E-28 3.4E-33 228.3 29.7 265 10-324 1-271 (328)
117 cd08251 polyketide_synthase po 100.0 1.7E-28 3.7E-33 225.8 26.7 261 29-342 2-271 (303)
118 cd05289 MDR_like_2 alcohol deh 100.0 3.5E-28 7.5E-33 224.1 26.4 271 10-342 1-277 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 7.9E-28 1.7E-32 222.9 28.5 277 10-342 1-290 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 3.7E-27 8E-32 220.4 29.6 277 11-342 1-303 (337)
121 cd05195 enoyl_red enoyl reduct 100.0 1.3E-27 2.8E-32 217.8 23.4 251 35-342 1-261 (293)
122 cd08267 MDR1 Medium chain dehy 100.0 3.1E-27 6.8E-32 219.2 25.6 264 23-342 15-287 (319)
123 smart00829 PKS_ER Enoylreducta 100.0 9.8E-27 2.1E-31 211.9 23.6 246 39-342 2-256 (288)
124 KOG1196 Predicted NAD-dependen 99.9 1E-23 2.3E-28 185.6 25.5 263 23-343 25-307 (343)
125 cd08255 2-desacetyl-2-hydroxye 99.9 2.4E-23 5.3E-28 190.0 23.2 219 56-342 14-244 (277)
126 KOG1202 Animal-type fatty acid 99.9 9E-23 1.9E-27 203.8 14.1 257 22-342 1429-1703(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 2.7E-23 6E-28 163.2 8.0 108 34-163 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.8 2.3E-18 5E-23 139.3 13.6 128 205-340 1-130 (130)
129 PRK09424 pntA NAD(P) transhydr 99.3 4E-11 8.6E-16 117.0 15.2 145 192-342 162-331 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.1 1E-09 2.2E-14 104.7 15.3 140 183-343 189-333 (413)
131 TIGR00561 pntA NAD(P) transhyd 98.5 1.6E-06 3.5E-11 84.7 11.7 127 193-322 162-313 (511)
132 PRK05476 S-adenosyl-L-homocyst 98.2 1.7E-05 3.7E-10 76.2 13.2 103 182-299 198-302 (425)
133 PRK08306 dipicolinate synthase 98.1 7.1E-05 1.5E-09 69.1 14.2 111 194-320 151-262 (296)
134 PRK11873 arsM arsenite S-adeno 98.1 8.3E-06 1.8E-10 74.4 7.9 103 189-298 72-185 (272)
135 TIGR00936 ahcY adenosylhomocys 98.1 5.5E-05 1.2E-09 72.3 13.2 101 183-298 182-284 (406)
136 TIGR01035 hemA glutamyl-tRNA r 98.0 2.9E-07 6.4E-12 88.9 -4.8 156 66-276 89-252 (417)
137 cd05213 NAD_bind_Glutamyl_tRNA 98.0 2.3E-05 5E-10 72.9 8.0 109 158-277 139-251 (311)
138 PLN02494 adenosylhomocysteinas 97.9 0.00011 2.4E-09 71.0 12.1 101 183-298 241-343 (477)
139 PRK00517 prmA ribosomal protei 97.9 0.00024 5.2E-09 64.0 13.3 134 148-299 78-216 (250)
140 PRK12771 putative glutamate sy 97.9 1E-05 2.2E-10 81.5 3.9 80 191-276 133-234 (564)
141 COG2518 Pcm Protein-L-isoaspar 97.9 6.4E-05 1.4E-09 64.8 8.1 119 165-295 45-168 (209)
142 TIGR00518 alaDH alanine dehydr 97.8 0.00019 4.1E-09 68.4 10.5 118 195-321 167-298 (370)
143 PRK08324 short chain dehydroge 97.7 0.00025 5.5E-09 73.1 10.7 137 148-298 386-559 (681)
144 TIGR02853 spore_dpaA dipicolin 97.7 0.00068 1.5E-08 62.2 12.3 96 194-301 150-245 (287)
145 PTZ00075 Adenosylhomocysteinas 97.6 0.00064 1.4E-08 66.0 11.6 100 184-298 242-343 (476)
146 TIGR00406 prmA ribosomal prote 97.6 0.00036 7.9E-09 64.2 9.2 98 192-298 157-261 (288)
147 PF13602 ADH_zinc_N_2: Zinc-bi 97.6 1.5E-05 3.3E-10 63.6 -0.1 89 238-343 1-96 (127)
148 PRK00045 hemA glutamyl-tRNA re 97.3 0.00041 8.9E-09 67.4 6.6 160 66-276 91-254 (423)
149 KOG1209 1-Acyl dihydroxyaceton 97.3 0.0017 3.8E-08 55.8 9.0 106 193-300 5-142 (289)
150 COG4221 Short-chain alcohol de 97.3 0.0016 3.4E-08 57.4 8.6 79 194-274 5-91 (246)
151 PRK05693 short chain dehydroge 97.2 0.0063 1.4E-07 55.2 12.2 76 196-273 2-81 (274)
152 PRK13943 protein-L-isoaspartat 97.2 0.0039 8.4E-08 58.1 10.8 102 186-294 72-178 (322)
153 PRK05786 fabG 3-ketoacyl-(acyl 97.2 0.0055 1.2E-07 54.1 11.5 103 194-299 4-138 (238)
154 COG0300 DltE Short-chain dehyd 97.1 0.011 2.4E-07 53.2 13.0 80 193-274 4-94 (265)
155 PRK06182 short chain dehydroge 97.1 0.0056 1.2E-07 55.5 11.5 79 194-274 2-84 (273)
156 PRK11705 cyclopropane fatty ac 97.1 0.0032 6.9E-08 60.3 10.0 109 178-296 151-267 (383)
157 PRK00377 cbiT cobalt-precorrin 97.1 0.0062 1.3E-07 52.7 11.0 102 188-295 34-144 (198)
158 PF01488 Shikimate_DH: Shikima 97.1 0.0022 4.7E-08 52.0 7.4 97 193-298 10-111 (135)
159 PRK05993 short chain dehydroge 97.0 0.0062 1.3E-07 55.5 10.3 78 194-273 3-85 (277)
160 PRK12742 oxidoreductase; Provi 97.0 0.019 4.1E-07 50.6 12.9 101 194-299 5-134 (237)
161 COG3967 DltE Short-chain dehyd 96.9 0.0067 1.5E-07 52.0 8.4 78 194-273 4-87 (245)
162 COG2242 CobL Precorrin-6B meth 96.8 0.017 3.6E-07 49.0 10.7 103 188-297 28-136 (187)
163 PF13460 NAD_binding_10: NADH( 96.8 0.01 2.3E-07 50.2 9.9 93 198-298 1-99 (183)
164 PF00670 AdoHcyase_NAD: S-aden 96.8 0.014 3.1E-07 48.4 10.1 103 192-313 20-123 (162)
165 KOG1205 Predicted dehydrogenas 96.8 0.015 3.2E-07 52.9 11.0 112 194-307 11-160 (282)
166 PF11017 DUF2855: Protein of u 96.7 0.075 1.6E-06 49.0 15.1 138 148-298 90-233 (314)
167 PF02826 2-Hacid_dh_C: D-isome 96.7 0.012 2.6E-07 50.1 9.3 90 193-297 34-128 (178)
168 PF12847 Methyltransf_18: Meth 96.7 0.0064 1.4E-07 47.0 7.0 92 194-294 1-109 (112)
169 PRK13944 protein-L-isoaspartat 96.6 0.016 3.6E-07 50.4 9.7 102 186-295 64-172 (205)
170 PLN03209 translocon at the inn 96.6 0.037 8.1E-07 55.2 13.1 105 188-299 73-210 (576)
171 PRK08261 fabG 3-ketoacyl-(acyl 96.6 0.024 5.3E-07 55.4 11.9 78 194-273 209-293 (450)
172 PRK04148 hypothetical protein; 96.6 0.012 2.6E-07 47.4 7.8 97 192-297 14-110 (134)
173 PRK07326 short chain dehydroge 96.6 0.031 6.8E-07 49.2 11.5 79 194-274 5-92 (237)
174 TIGR00438 rrmJ cell division p 96.6 0.031 6.8E-07 47.8 11.1 101 189-297 27-147 (188)
175 PRK13942 protein-L-isoaspartat 96.6 0.0089 1.9E-07 52.4 7.7 102 186-295 68-175 (212)
176 PRK08017 oxidoreductase; Provi 96.6 0.016 3.4E-07 51.8 9.5 76 196-273 3-83 (256)
177 TIGR02469 CbiT precorrin-6Y C5 96.6 0.034 7.3E-07 43.5 10.4 104 187-296 12-122 (124)
178 PRK07109 short chain dehydroge 96.5 0.027 5.9E-07 52.9 11.2 79 194-274 7-95 (334)
179 PF01135 PCMT: Protein-L-isoas 96.5 0.0069 1.5E-07 52.9 6.5 102 186-296 64-173 (209)
180 PRK06139 short chain dehydroge 96.5 0.013 2.9E-07 54.9 8.8 78 194-273 6-93 (330)
181 PRK07806 short chain dehydroge 96.5 0.041 8.8E-07 48.9 11.6 101 194-297 5-135 (248)
182 PRK08265 short chain dehydroge 96.5 0.034 7.3E-07 50.1 11.0 79 194-274 5-90 (261)
183 PRK12828 short chain dehydroge 96.5 0.042 9.2E-07 48.2 11.5 79 194-274 6-92 (239)
184 COG1748 LYS9 Saccharopine dehy 96.5 0.037 7.9E-07 52.7 11.4 97 196-299 2-102 (389)
185 PRK07060 short chain dehydroge 96.3 0.033 7.2E-07 49.3 9.8 77 194-274 8-87 (245)
186 PRK12939 short chain dehydroge 96.3 0.069 1.5E-06 47.3 11.6 79 194-274 6-94 (250)
187 PF01262 AlaDh_PNT_C: Alanine 96.2 0.015 3.2E-07 49.0 6.8 101 195-298 20-141 (168)
188 PRK06057 short chain dehydroge 96.2 0.029 6.2E-07 50.2 9.1 79 194-274 6-89 (255)
189 PRK08177 short chain dehydroge 96.2 0.03 6.5E-07 49.1 9.0 77 196-274 2-81 (225)
190 PRK03369 murD UDP-N-acetylmura 96.2 0.028 6.2E-07 55.6 9.7 73 192-275 9-81 (488)
191 PF02353 CMAS: Mycolic acid cy 96.2 0.013 2.9E-07 53.3 6.7 101 185-295 53-165 (273)
192 PRK00107 gidB 16S rRNA methylt 96.2 0.053 1.1E-06 46.5 9.9 97 192-296 43-145 (187)
193 PRK06953 short chain dehydroge 96.2 0.039 8.4E-07 48.3 9.4 77 196-274 2-80 (222)
194 PRK07231 fabG 3-ketoacyl-(acyl 96.1 0.068 1.5E-06 47.4 11.0 79 194-274 4-91 (251)
195 PRK08628 short chain dehydroge 96.1 0.073 1.6E-06 47.6 11.2 79 194-274 6-93 (258)
196 PRK07576 short chain dehydroge 96.1 0.092 2E-06 47.3 11.9 78 194-273 8-95 (264)
197 PRK14967 putative methyltransf 96.1 0.12 2.6E-06 45.5 12.0 99 188-296 30-159 (223)
198 TIGR02356 adenyl_thiF thiazole 96.0 0.059 1.3E-06 46.8 9.6 35 194-228 20-54 (202)
199 PRK05653 fabG 3-ketoacyl-(acyl 96.0 0.11 2.3E-06 45.8 11.5 78 195-274 5-92 (246)
200 PRK06949 short chain dehydroge 96.0 0.037 8E-07 49.4 8.6 80 193-274 7-96 (258)
201 PRK07832 short chain dehydroge 96.0 0.11 2.3E-06 47.1 11.6 76 197-274 2-88 (272)
202 PRK12823 benD 1,6-dihydroxycyc 96.0 0.071 1.5E-06 47.7 10.4 78 194-273 7-93 (260)
203 PLN02780 ketoreductase/ oxidor 96.0 0.049 1.1E-06 50.8 9.5 79 194-273 52-141 (320)
204 TIGR03325 BphB_TodD cis-2,3-di 95.9 0.038 8.2E-07 49.7 8.5 78 194-273 4-88 (262)
205 TIGR00080 pimt protein-L-isoas 95.9 0.026 5.5E-07 49.5 7.1 103 186-295 69-176 (215)
206 PRK07831 short chain dehydroge 95.9 0.047 1E-06 49.0 9.1 81 192-274 14-107 (262)
207 PRK08267 short chain dehydroge 95.9 0.13 2.7E-06 46.1 11.8 77 196-274 2-87 (260)
208 PRK05872 short chain dehydroge 95.9 0.045 9.7E-07 50.4 9.0 79 194-274 8-95 (296)
209 PRK07814 short chain dehydroge 95.9 0.039 8.5E-07 49.7 8.4 78 194-273 9-96 (263)
210 PRK09291 short chain dehydroge 95.9 0.052 1.1E-06 48.5 9.1 73 195-273 2-82 (257)
211 PRK12829 short chain dehydroge 95.9 0.035 7.6E-07 49.7 8.0 81 192-274 8-96 (264)
212 COG0686 Ald Alanine dehydrogen 95.9 0.031 6.7E-07 51.0 7.4 98 195-299 168-271 (371)
213 PRK13940 glutamyl-tRNA reducta 95.9 0.048 1E-06 52.7 9.3 96 193-298 179-275 (414)
214 PRK06128 oxidoreductase; Provi 95.9 0.093 2E-06 48.3 10.9 102 194-298 54-193 (300)
215 PRK07825 short chain dehydroge 95.9 0.052 1.1E-06 49.1 9.0 78 195-274 5-88 (273)
216 PRK06200 2,3-dihydroxy-2,3-dih 95.8 0.049 1.1E-06 48.9 8.7 78 194-273 5-89 (263)
217 PRK06841 short chain dehydroge 95.8 0.048 1E-06 48.6 8.6 79 194-274 14-99 (255)
218 PRK06484 short chain dehydroge 95.8 0.1 2.2E-06 52.0 11.6 104 193-299 267-403 (520)
219 PRK09186 flagellin modificatio 95.8 0.13 2.9E-06 45.7 11.3 78 194-273 3-92 (256)
220 PRK08339 short chain dehydroge 95.8 0.061 1.3E-06 48.5 9.1 79 194-274 7-95 (263)
221 PRK06180 short chain dehydroge 95.8 0.05 1.1E-06 49.4 8.6 78 195-274 4-88 (277)
222 PRK09242 tropinone reductase; 95.8 0.18 3.9E-06 45.0 12.1 79 194-274 8-98 (257)
223 PRK08217 fabG 3-ketoacyl-(acyl 95.8 0.055 1.2E-06 48.0 8.7 78 194-273 4-91 (253)
224 CHL00194 ycf39 Ycf39; Provisio 95.8 0.13 2.9E-06 47.7 11.5 95 197-298 2-111 (317)
225 PRK08261 fabG 3-ketoacyl-(acyl 95.8 0.024 5.1E-07 55.5 6.8 94 188-299 27-126 (450)
226 PF06325 PrmA: Ribosomal prote 95.8 0.054 1.2E-06 49.8 8.6 96 192-299 159-262 (295)
227 COG4122 Predicted O-methyltran 95.8 0.16 3.5E-06 44.5 11.2 109 188-299 53-169 (219)
228 PRK07402 precorrin-6B methylas 95.7 0.25 5.5E-06 42.5 12.4 106 186-297 32-143 (196)
229 TIGR01832 kduD 2-deoxy-D-gluco 95.7 0.065 1.4E-06 47.5 8.9 79 194-274 4-90 (248)
230 PRK08263 short chain dehydroge 95.7 0.13 2.8E-06 46.6 10.9 78 195-274 3-87 (275)
231 TIGR01318 gltD_gamma_fam gluta 95.7 0.061 1.3E-06 53.0 9.3 77 194-275 140-237 (467)
232 PRK05866 short chain dehydroge 95.7 0.069 1.5E-06 49.1 9.1 79 194-274 39-127 (293)
233 PF03446 NAD_binding_2: NAD bi 95.6 0.25 5.5E-06 41.2 11.7 44 197-241 3-46 (163)
234 PRK06719 precorrin-2 dehydroge 95.6 0.32 7E-06 40.4 12.2 82 194-288 12-93 (157)
235 PRK06196 oxidoreductase; Provi 95.6 0.076 1.7E-06 49.3 9.4 78 194-273 25-108 (315)
236 PRK05867 short chain dehydroge 95.6 0.058 1.3E-06 48.2 8.3 79 194-274 8-96 (253)
237 PRK06398 aldose dehydrogenase; 95.6 0.09 2E-06 47.2 9.5 74 194-274 5-82 (258)
238 PRK15116 sulfur acceptor prote 95.6 0.27 5.9E-06 44.6 12.4 102 194-297 29-154 (268)
239 PRK07502 cyclohexadienyl dehyd 95.6 0.13 2.8E-06 47.6 10.7 91 196-297 7-101 (307)
240 PRK06718 precorrin-2 dehydroge 95.6 0.24 5.2E-06 43.0 11.6 92 194-297 9-101 (202)
241 PRK12809 putative oxidoreducta 95.5 0.072 1.6E-06 54.6 9.6 76 194-275 309-406 (639)
242 PLN02366 spermidine synthase 95.5 0.1 2.2E-06 48.4 9.7 102 193-296 90-206 (308)
243 PRK06101 short chain dehydroge 95.5 0.2 4.4E-06 44.3 11.4 42 196-238 2-44 (240)
244 PRK08594 enoyl-(acyl carrier p 95.5 0.16 3.6E-06 45.6 10.9 103 194-299 6-150 (257)
245 TIGR03840 TMPT_Se_Te thiopurin 95.5 0.24 5.3E-06 43.3 11.5 101 193-297 33-153 (213)
246 PRK07774 short chain dehydroge 95.5 0.077 1.7E-06 47.1 8.6 79 194-274 5-93 (250)
247 PRK09072 short chain dehydroge 95.5 0.091 2E-06 47.2 9.2 79 194-274 4-90 (263)
248 PRK11207 tellurite resistance 95.5 0.067 1.5E-06 46.2 7.9 98 188-295 24-133 (197)
249 PRK08415 enoyl-(acyl carrier p 95.5 0.36 7.7E-06 43.9 13.1 103 194-299 4-146 (274)
250 COG2519 GCD14 tRNA(1-methylade 95.5 0.13 2.8E-06 45.7 9.5 104 186-297 86-196 (256)
251 PRK12429 3-hydroxybutyrate deh 95.5 0.13 2.9E-06 45.7 10.1 78 194-273 3-90 (258)
252 cd01080 NAD_bind_m-THF_DH_Cycl 95.5 0.16 3.5E-06 42.7 9.8 77 192-298 41-118 (168)
253 PRK00811 spermidine synthase; 95.5 0.12 2.5E-06 47.5 9.7 101 193-296 75-191 (283)
254 KOG4022 Dihydropteridine reduc 95.5 0.15 3.1E-06 42.3 9.0 73 196-274 4-82 (236)
255 COG2264 PrmA Ribosomal protein 95.4 0.14 3.1E-06 46.9 10.1 100 192-299 160-266 (300)
256 COG1179 Dinucleotide-utilizing 95.4 0.16 3.4E-06 44.9 9.7 104 194-299 29-156 (263)
257 COG0031 CysK Cysteine synthase 95.4 0.39 8.4E-06 44.1 12.7 111 187-297 54-202 (300)
258 PRK07985 oxidoreductase; Provi 95.4 0.2 4.4E-06 46.0 11.2 102 194-298 48-187 (294)
259 PRK06484 short chain dehydroge 95.4 0.18 3.8E-06 50.3 11.6 79 194-274 4-89 (520)
260 PRK06483 dihydromonapterin red 95.4 0.12 2.7E-06 45.5 9.4 78 195-274 2-84 (236)
261 PF13241 NAD_binding_7: Putati 95.3 0.11 2.3E-06 39.9 7.8 94 194-304 6-99 (103)
262 TIGR01470 cysG_Nterm siroheme 95.3 0.35 7.5E-06 42.1 11.8 114 194-320 8-124 (205)
263 PRK07904 short chain dehydroge 95.3 0.13 2.8E-06 46.1 9.5 81 192-274 5-97 (253)
264 COG0169 AroE Shikimate 5-dehyd 95.3 0.083 1.8E-06 48.3 8.2 45 193-237 124-168 (283)
265 PRK07024 short chain dehydroge 95.3 0.1 2.3E-06 46.7 8.9 77 195-273 2-87 (257)
266 PRK06500 short chain dehydroge 95.3 0.097 2.1E-06 46.4 8.6 79 194-274 5-90 (249)
267 PRK07478 short chain dehydroge 95.3 0.09 2E-06 46.9 8.4 79 194-274 5-93 (254)
268 PRK06463 fabG 3-ketoacyl-(acyl 95.3 0.1 2.2E-06 46.6 8.7 79 194-274 6-89 (255)
269 PRK07523 gluconate 5-dehydroge 95.3 0.098 2.1E-06 46.7 8.5 79 194-274 9-97 (255)
270 PRK07062 short chain dehydroge 95.2 0.087 1.9E-06 47.3 8.1 79 194-274 7-97 (265)
271 PRK12937 short chain dehydroge 95.2 0.3 6.4E-06 43.1 11.5 102 194-298 4-141 (245)
272 PRK08618 ornithine cyclodeamin 95.2 0.3 6.5E-06 45.7 11.9 102 193-308 125-232 (325)
273 PRK08317 hypothetical protein; 95.2 0.27 5.9E-06 43.1 11.2 104 186-297 11-125 (241)
274 PRK12481 2-deoxy-D-gluconate 3 95.2 0.091 2E-06 47.0 8.2 78 194-273 7-92 (251)
275 COG2910 Putative NADH-flavin r 95.2 0.097 2.1E-06 44.3 7.5 94 197-298 2-106 (211)
276 PRK13394 3-hydroxybutyrate deh 95.2 0.14 2.9E-06 45.8 9.3 79 194-274 6-94 (262)
277 cd01075 NAD_bind_Leu_Phe_Val_D 95.2 0.21 4.6E-06 43.2 10.1 82 193-287 26-108 (200)
278 PRK05876 short chain dehydroge 95.2 0.11 2.3E-06 47.3 8.6 78 194-273 5-92 (275)
279 PRK08589 short chain dehydroge 95.2 0.099 2.1E-06 47.3 8.4 79 194-274 5-92 (272)
280 PLN02476 O-methyltransferase 95.2 0.17 3.7E-06 46.1 9.6 107 187-297 111-229 (278)
281 PRK05854 short chain dehydroge 95.2 0.12 2.7E-06 47.9 9.1 78 194-273 13-102 (313)
282 PRK07890 short chain dehydroge 95.2 0.11 2.5E-06 46.2 8.6 79 194-274 4-92 (258)
283 PLN00141 Tic62-NAD(P)-related 95.1 0.23 5E-06 44.4 10.6 100 194-298 16-133 (251)
284 PRK07454 short chain dehydroge 95.1 0.14 3.1E-06 45.1 9.1 79 194-274 5-93 (241)
285 cd00755 YgdL_like Family of ac 95.1 0.17 3.7E-06 44.9 9.4 101 195-297 11-135 (231)
286 PRK08703 short chain dehydroge 95.1 0.085 1.8E-06 46.6 7.6 80 194-274 5-97 (239)
287 COG2227 UbiG 2-polyprenyl-3-me 95.1 0.26 5.5E-06 43.6 10.2 96 193-296 58-161 (243)
288 PRK04457 spermidine synthase; 95.1 0.28 6E-06 44.4 11.0 97 193-294 65-175 (262)
289 PRK00536 speE spermidine synth 95.1 0.096 2.1E-06 47.3 7.8 101 193-297 71-172 (262)
290 PRK07063 short chain dehydroge 95.1 0.12 2.6E-06 46.3 8.6 79 194-274 6-96 (260)
291 cd05311 NAD_bind_2_malic_enz N 95.1 0.3 6.6E-06 43.2 10.9 93 193-297 23-129 (226)
292 PRK06181 short chain dehydroge 95.1 0.12 2.7E-06 46.3 8.6 77 196-274 2-88 (263)
293 KOG0725 Reductases with broad 95.1 0.11 2.4E-06 47.2 8.3 81 193-274 6-99 (270)
294 PRK12769 putative oxidoreducta 95.1 0.11 2.4E-06 53.5 9.1 76 193-274 325-422 (654)
295 PRK06179 short chain dehydroge 95.1 0.074 1.6E-06 47.9 7.2 77 194-274 3-83 (270)
296 PRK06482 short chain dehydroge 95.1 0.13 2.7E-06 46.6 8.7 77 196-274 3-86 (276)
297 PRK06194 hypothetical protein; 95.1 0.12 2.6E-06 47.1 8.5 78 195-274 6-93 (287)
298 PRK05884 short chain dehydroge 95.1 0.17 3.7E-06 44.4 9.2 74 197-273 2-78 (223)
299 PRK06172 short chain dehydroge 95.0 0.12 2.6E-06 46.0 8.4 79 194-274 6-94 (253)
300 PRK06940 short chain dehydroge 95.0 0.2 4.3E-06 45.5 9.9 99 196-298 3-127 (275)
301 PF02558 ApbA: Ketopantoate re 95.0 0.017 3.6E-07 47.5 2.5 93 198-296 1-101 (151)
302 PRK06701 short chain dehydroge 95.0 0.29 6.3E-06 44.8 11.0 79 194-274 45-134 (290)
303 PRK08219 short chain dehydroge 95.0 0.21 4.6E-06 43.4 9.7 74 196-274 4-81 (227)
304 PRK07677 short chain dehydroge 95.0 0.12 2.5E-06 46.2 8.0 77 195-273 1-87 (252)
305 PLN02253 xanthoxin dehydrogena 94.9 0.12 2.6E-06 46.8 8.3 79 194-274 17-104 (280)
306 PRK06505 enoyl-(acyl carrier p 94.9 0.18 3.9E-06 45.8 9.3 78 194-273 6-94 (271)
307 PF03435 Saccharop_dh: Sacchar 94.9 0.19 4E-06 48.2 9.9 91 198-295 1-97 (386)
308 PRK06077 fabG 3-ketoacyl-(acyl 94.9 0.43 9.2E-06 42.3 11.7 102 195-299 6-143 (252)
309 PRK07453 protochlorophyllide o 94.9 0.14 3.1E-06 47.6 8.8 78 194-273 5-92 (322)
310 PRK06079 enoyl-(acyl carrier p 94.9 0.15 3.2E-06 45.7 8.6 78 194-273 6-92 (252)
311 PRK12475 thiamine/molybdopteri 94.9 0.18 4E-06 47.4 9.5 35 195-229 24-58 (338)
312 PRK08643 acetoin reductase; Va 94.9 0.14 3E-06 45.7 8.4 78 195-274 2-89 (256)
313 cd01483 E1_enzyme_family Super 94.9 0.26 5.7E-06 40.0 9.4 32 197-228 1-32 (143)
314 PF00106 adh_short: short chai 94.9 0.075 1.6E-06 43.9 6.2 77 197-274 2-90 (167)
315 COG2226 UbiE Methylase involve 94.9 0.47 1E-05 42.2 11.4 106 187-299 44-159 (238)
316 PRK08213 gluconate 5-dehydroge 94.9 0.15 3.3E-06 45.5 8.7 79 194-274 11-99 (259)
317 PRK06198 short chain dehydroge 94.9 0.12 2.6E-06 46.2 8.0 80 194-274 5-94 (260)
318 PRK06114 short chain dehydroge 94.9 0.15 3.2E-06 45.6 8.5 79 194-274 7-96 (254)
319 PRK07856 short chain dehydroge 94.9 0.11 2.3E-06 46.4 7.6 74 194-273 5-84 (252)
320 PRK07688 thiamine/molybdopteri 94.9 0.17 3.8E-06 47.6 9.2 34 195-228 24-57 (339)
321 PRK08264 short chain dehydroge 94.9 0.13 2.9E-06 45.2 8.1 75 194-274 5-83 (238)
322 TIGR00477 tehB tellurite resis 94.9 0.16 3.5E-06 43.7 8.4 99 186-295 22-132 (195)
323 PRK08226 short chain dehydroge 94.9 0.15 3.3E-06 45.6 8.6 78 194-273 5-91 (263)
324 TIGR02355 moeB molybdopterin s 94.8 0.16 3.4E-06 45.4 8.5 35 195-229 24-58 (240)
325 COG2230 Cfa Cyclopropane fatty 94.8 0.19 4.1E-06 45.7 8.9 105 182-298 60-178 (283)
326 PRK12367 short chain dehydroge 94.8 0.21 4.6E-06 44.7 9.3 72 195-274 14-89 (245)
327 PRK08340 glucose-1-dehydrogena 94.8 0.16 3.4E-06 45.5 8.6 76 197-274 2-86 (259)
328 cd01078 NAD_bind_H4MPT_DH NADP 94.8 0.45 9.7E-06 40.8 11.0 76 194-276 27-109 (194)
329 cd01065 NAD_bind_Shikimate_DH 94.8 0.2 4.4E-06 41.1 8.5 96 193-298 17-118 (155)
330 PRK01683 trans-aconitate 2-met 94.8 0.39 8.4E-06 43.2 11.0 102 186-296 23-130 (258)
331 PRK07533 enoyl-(acyl carrier p 94.8 0.21 4.6E-06 44.8 9.3 78 194-273 9-97 (258)
332 PRK06125 short chain dehydroge 94.8 0.17 3.7E-06 45.3 8.7 77 194-274 6-91 (259)
333 PRK10538 malonic semialdehyde 94.8 0.16 3.5E-06 45.2 8.4 76 197-274 2-84 (248)
334 KOG1201 Hydroxysteroid 17-beta 94.7 0.11 2.3E-06 47.3 7.1 79 193-274 36-124 (300)
335 PRK12826 3-ketoacyl-(acyl-carr 94.7 0.2 4.3E-06 44.3 9.0 79 194-274 5-93 (251)
336 PRK12548 shikimate 5-dehydroge 94.7 0.27 5.9E-06 45.2 10.0 36 194-229 125-160 (289)
337 PRK07035 short chain dehydroge 94.7 0.17 3.6E-06 45.1 8.4 77 195-273 8-94 (252)
338 COG3288 PntA NAD/NADP transhyd 94.7 0.14 3.1E-06 46.6 7.7 128 192-322 161-309 (356)
339 PRK08251 short chain dehydroge 94.7 0.18 3.9E-06 44.7 8.7 77 195-273 2-90 (248)
340 PRK06197 short chain dehydroge 94.7 0.18 3.8E-06 46.6 8.8 78 194-273 15-104 (306)
341 PRK08993 2-deoxy-D-gluconate 3 94.7 0.18 3.8E-06 45.1 8.6 79 194-274 9-95 (253)
342 PRK14175 bifunctional 5,10-met 94.7 0.31 6.8E-06 44.5 10.1 82 187-298 149-232 (286)
343 PRK08862 short chain dehydroge 94.7 0.22 4.8E-06 43.9 9.1 78 194-273 4-92 (227)
344 PRK07574 formate dehydrogenase 94.7 0.31 6.7E-06 46.6 10.5 35 194-229 191-225 (385)
345 PRK05875 short chain dehydroge 94.7 0.17 3.7E-06 45.7 8.5 78 194-273 6-95 (276)
346 PRK06138 short chain dehydroge 94.7 0.16 3.4E-06 45.1 8.2 79 194-274 4-91 (252)
347 KOG1014 17 beta-hydroxysteroid 94.7 0.23 5.1E-06 45.4 9.0 79 193-274 47-136 (312)
348 PRK05690 molybdopterin biosynt 94.6 0.22 4.8E-06 44.6 8.9 34 195-228 32-65 (245)
349 PRK08328 hypothetical protein; 94.6 0.17 3.7E-06 44.9 8.1 34 195-228 27-60 (231)
350 PRK07067 sorbitol dehydrogenas 94.6 0.2 4.2E-06 44.8 8.7 77 195-273 6-89 (257)
351 PRK08220 2,3-dihydroxybenzoate 94.6 0.33 7.2E-06 43.0 10.1 74 194-274 7-86 (252)
352 PRK08644 thiamine biosynthesis 94.6 0.26 5.6E-06 43.1 9.1 34 195-228 28-61 (212)
353 PRK07074 short chain dehydroge 94.6 0.21 4.6E-06 44.6 8.8 78 195-274 2-87 (257)
354 PRK12747 short chain dehydroge 94.6 0.65 1.4E-05 41.2 12.0 37 194-231 3-41 (252)
355 COG0373 HemA Glutamyl-tRNA red 94.6 0.25 5.5E-06 47.4 9.6 96 193-298 176-276 (414)
356 PRK08303 short chain dehydroge 94.6 0.19 4.2E-06 46.5 8.7 34 194-228 7-41 (305)
357 PRK05717 oxidoreductase; Valid 94.6 0.21 4.5E-06 44.6 8.7 79 194-274 9-94 (255)
358 TIGR00507 aroE shikimate 5-deh 94.6 0.29 6.3E-06 44.5 9.6 92 193-297 115-215 (270)
359 PRK06603 enoyl-(acyl carrier p 94.6 0.2 4.3E-06 45.1 8.5 78 194-273 7-95 (260)
360 PRK06914 short chain dehydroge 94.6 0.2 4.4E-06 45.3 8.7 77 195-274 3-91 (280)
361 PRK07577 short chain dehydroge 94.5 0.15 3.2E-06 44.7 7.6 73 195-274 3-78 (234)
362 PRK08085 gluconate 5-dehydroge 94.5 0.22 4.9E-06 44.3 8.8 79 194-274 8-96 (254)
363 PRK07791 short chain dehydroge 94.5 0.22 4.8E-06 45.5 8.9 36 193-229 4-40 (286)
364 PF02254 TrkA_N: TrkA-N domain 94.5 0.78 1.7E-05 35.5 10.8 93 198-296 1-96 (116)
365 PRK00312 pcm protein-L-isoaspa 94.5 0.18 3.8E-06 44.0 7.9 100 186-295 70-174 (212)
366 PRK08277 D-mannonate oxidoredu 94.5 0.2 4.4E-06 45.3 8.5 78 194-273 9-96 (278)
367 PLN02781 Probable caffeoyl-CoA 94.5 0.39 8.4E-06 42.7 10.1 106 187-296 61-178 (234)
368 PRK06124 gluconate 5-dehydroge 94.5 0.23 5E-06 44.3 8.7 79 194-274 10-98 (256)
369 PLN02244 tocopherol O-methyltr 94.5 0.22 4.9E-06 46.9 8.9 98 193-297 117-224 (340)
370 PRK06935 2-deoxy-D-gluconate 3 94.4 0.29 6.2E-06 43.8 9.3 79 194-274 14-101 (258)
371 PLN03139 formate dehydrogenase 94.4 0.41 8.9E-06 45.8 10.6 45 194-239 198-242 (386)
372 PLN03075 nicotianamine synthas 94.4 0.3 6.5E-06 44.9 9.3 98 194-296 123-233 (296)
373 PRK06720 hypothetical protein; 94.4 0.27 6E-06 41.3 8.5 79 194-274 15-103 (169)
374 PF08704 GCD14: tRNA methyltra 94.4 0.14 3E-06 45.9 6.9 107 186-296 32-146 (247)
375 PF00899 ThiF: ThiF family; I 94.4 0.14 3E-06 41.3 6.4 34 195-228 2-35 (135)
376 PRK07666 fabG 3-ketoacyl-(acyl 94.4 0.23 5E-06 43.8 8.4 78 195-274 7-94 (239)
377 PRK12936 3-ketoacyl-(acyl-carr 94.3 0.27 5.8E-06 43.4 8.7 79 194-274 5-90 (245)
378 PRK12743 oxidoreductase; Provi 94.3 0.24 5.2E-06 44.3 8.4 78 195-274 2-90 (256)
379 PRK07066 3-hydroxybutyryl-CoA 94.3 0.89 1.9E-05 42.4 12.3 38 196-234 8-45 (321)
380 PRK11036 putative S-adenosyl-L 94.2 0.95 2.1E-05 40.7 12.2 96 193-295 43-148 (255)
381 COG0569 TrkA K+ transport syst 94.2 0.44 9.6E-06 42.1 9.8 83 197-285 2-86 (225)
382 cd00757 ThiF_MoeB_HesA_family 94.2 0.39 8.5E-06 42.5 9.4 34 195-228 21-54 (228)
383 PRK12384 sorbitol-6-phosphate 94.2 0.24 5.3E-06 44.2 8.2 77 195-273 2-90 (259)
384 PRK10669 putative cation:proto 94.1 0.46 9.9E-06 48.0 10.8 94 196-295 418-514 (558)
385 PF01596 Methyltransf_3: O-met 94.1 0.13 2.8E-06 44.8 6.0 104 190-298 41-157 (205)
386 PRK12549 shikimate 5-dehydroge 94.1 0.23 4.9E-06 45.6 7.9 42 194-235 126-167 (284)
387 PRK08690 enoyl-(acyl carrier p 94.1 0.3 6.4E-06 44.0 8.6 79 194-274 5-94 (261)
388 TIGR03206 benzo_BadH 2-hydroxy 94.1 0.29 6.4E-06 43.3 8.5 78 194-273 2-89 (250)
389 PRK08762 molybdopterin biosynt 94.1 0.26 5.7E-06 47.1 8.6 35 194-228 134-168 (376)
390 PRK14103 trans-aconitate 2-met 94.1 0.78 1.7E-05 41.2 11.3 98 186-295 21-125 (255)
391 PRK01581 speE spermidine synth 94.0 0.96 2.1E-05 42.8 12.0 103 192-297 148-269 (374)
392 KOG1610 Corticosteroid 11-beta 94.0 0.86 1.9E-05 41.9 11.2 106 193-300 27-168 (322)
393 TIGR00417 speE spermidine synt 94.0 0.53 1.2E-05 42.8 10.2 101 193-296 71-186 (270)
394 PRK07984 enoyl-(acyl carrier p 94.0 0.27 5.8E-06 44.4 8.2 78 194-273 5-93 (262)
395 TIGR01963 PHB_DH 3-hydroxybuty 94.0 0.29 6.2E-06 43.4 8.3 77 196-274 2-88 (255)
396 cd01492 Aos1_SUMO Ubiquitin ac 94.0 0.43 9.4E-06 41.2 9.0 100 195-297 21-143 (197)
397 PRK08278 short chain dehydroge 94.0 0.31 6.7E-06 44.2 8.6 36 194-230 5-41 (273)
398 PRK06523 short chain dehydroge 93.9 0.21 4.5E-06 44.6 7.4 75 194-273 8-86 (260)
399 TIGR01505 tartro_sem_red 2-hyd 93.9 0.64 1.4E-05 42.7 10.5 43 197-240 1-43 (291)
400 PRK07417 arogenate dehydrogena 93.9 0.56 1.2E-05 42.8 10.1 68 197-276 2-69 (279)
401 PLN02657 3,8-divinyl protochlo 93.8 0.49 1.1E-05 45.5 10.0 106 190-298 55-183 (390)
402 PRK13255 thiopurine S-methyltr 93.8 0.38 8.2E-06 42.3 8.5 101 191-295 34-154 (218)
403 PRK06113 7-alpha-hydroxysteroi 93.8 0.34 7.5E-06 43.2 8.5 79 194-274 10-98 (255)
404 PRK07102 short chain dehydroge 93.7 0.54 1.2E-05 41.5 9.6 38 196-234 2-40 (243)
405 TIGR02622 CDP_4_6_dhtase CDP-g 93.7 0.18 3.9E-06 47.5 6.8 75 194-274 3-85 (349)
406 PRK03562 glutathione-regulated 93.7 0.54 1.2E-05 48.1 10.7 95 195-295 400-497 (621)
407 PF05368 NmrA: NmrA-like famil 93.7 0.48 1E-05 41.7 9.1 70 198-273 1-73 (233)
408 PRK12938 acetyacetyl-CoA reduc 93.7 0.23 5.1E-06 43.9 7.2 78 195-274 3-91 (246)
409 PRK05597 molybdopterin biosynt 93.7 0.37 8.1E-06 45.7 8.8 35 195-229 28-62 (355)
410 PRK07097 gluconate 5-dehydroge 93.7 0.37 8E-06 43.3 8.5 79 194-274 9-97 (265)
411 cd01487 E1_ThiF_like E1_ThiF_l 93.7 0.43 9.3E-06 40.4 8.3 33 197-229 1-33 (174)
412 PTZ00098 phosphoethanolamine N 93.7 0.42 9.1E-06 43.3 8.8 105 186-297 44-157 (263)
413 PRK08287 cobalt-precorrin-6Y C 93.6 1.3 2.9E-05 37.6 11.5 101 187-296 24-131 (187)
414 PLN00203 glutamyl-tRNA reducta 93.6 0.37 8.1E-06 48.0 9.0 97 195-298 266-371 (519)
415 PRK08945 putative oxoacyl-(acy 93.6 0.33 7.1E-06 43.0 7.9 40 192-232 9-49 (247)
416 PRK05650 short chain dehydroge 93.6 0.43 9.3E-06 43.0 8.8 76 197-274 2-87 (270)
417 PRK07340 ornithine cyclodeamin 93.6 0.38 8.1E-06 44.6 8.4 104 193-310 123-230 (304)
418 PF07991 IlvN: Acetohydroxy ac 93.6 1.4 2.9E-05 36.7 10.7 86 194-294 3-93 (165)
419 PLN02928 oxidoreductase family 93.6 0.56 1.2E-05 44.3 9.7 34 194-228 158-191 (347)
420 PF13659 Methyltransf_26: Meth 93.6 0.3 6.6E-06 37.8 6.8 96 195-295 1-114 (117)
421 PRK07424 bifunctional sterol d 93.5 0.47 1E-05 45.8 9.3 74 194-274 177-255 (406)
422 TIGR02354 thiF_fam2 thiamine b 93.5 0.68 1.5E-05 40.1 9.5 34 195-228 21-54 (200)
423 PRK15469 ghrA bifunctional gly 93.5 0.35 7.7E-06 45.0 8.2 36 194-230 135-170 (312)
424 PRK07370 enoyl-(acyl carrier p 93.5 0.33 7.1E-06 43.6 7.8 103 194-299 5-150 (258)
425 PRK13243 glyoxylate reductase; 93.5 0.9 1.9E-05 42.7 10.9 36 194-230 149-184 (333)
426 TIGR00563 rsmB ribosomal RNA s 93.5 0.8 1.7E-05 44.6 10.9 103 188-295 232-367 (426)
427 PRK04266 fibrillarin; Provisio 93.5 1.4 3.1E-05 38.9 11.5 102 188-295 66-175 (226)
428 PLN02490 MPBQ/MSBQ methyltrans 93.4 0.6 1.3E-05 43.9 9.6 99 193-297 112-216 (340)
429 PRK05600 thiamine biosynthesis 93.4 0.53 1.2E-05 44.9 9.4 35 194-228 40-74 (370)
430 KOG1207 Diacetyl reductase/L-x 93.4 0.31 6.6E-06 40.9 6.6 46 194-240 6-52 (245)
431 PRK08309 short chain dehydroge 93.4 2.9 6.3E-05 35.4 12.9 143 197-342 2-166 (177)
432 PRK11559 garR tartronate semia 93.3 1.1 2.3E-05 41.3 11.1 43 197-240 4-46 (296)
433 PF02670 DXP_reductoisom: 1-de 93.3 0.49 1.1E-05 37.8 7.6 94 198-293 1-118 (129)
434 PRK07792 fabG 3-ketoacyl-(acyl 93.3 0.6 1.3E-05 43.1 9.5 79 194-274 11-99 (306)
435 PRK08063 enoyl-(acyl carrier p 93.3 0.4 8.7E-06 42.4 8.1 79 194-274 3-92 (250)
436 PRK06849 hypothetical protein; 93.3 0.71 1.5E-05 44.3 10.2 96 194-292 3-103 (389)
437 PRK12550 shikimate 5-dehydroge 93.3 0.42 9.1E-06 43.5 8.1 45 192-236 119-163 (272)
438 PRK08159 enoyl-(acyl carrier p 93.3 0.51 1.1E-05 42.8 8.8 78 194-273 9-97 (272)
439 PRK06171 sorbitol-6-phosphate 93.3 0.21 4.6E-06 44.8 6.2 75 194-273 8-86 (266)
440 PRK01438 murD UDP-N-acetylmura 93.3 0.66 1.4E-05 45.8 10.2 69 194-274 15-88 (480)
441 PRK05557 fabG 3-ketoacyl-(acyl 93.2 0.51 1.1E-05 41.5 8.5 79 194-274 4-93 (248)
442 PRK14192 bifunctional 5,10-met 93.2 0.78 1.7E-05 42.0 9.8 76 193-298 157-233 (283)
443 PLN02589 caffeoyl-CoA O-methyl 93.1 1.2 2.6E-05 39.9 10.7 104 189-297 74-191 (247)
444 PRK14027 quinate/shikimate deh 93.1 0.41 8.8E-06 43.9 7.8 42 194-235 126-167 (283)
445 TIGR02415 23BDH acetoin reduct 93.1 0.5 1.1E-05 41.9 8.4 76 197-274 2-87 (254)
446 PRK00121 trmB tRNA (guanine-N( 93.1 1.7 3.6E-05 37.6 11.4 98 194-296 40-156 (202)
447 PRK14618 NAD(P)H-dependent gly 93.1 0.94 2E-05 42.3 10.5 93 196-296 5-104 (328)
448 PRK03659 glutathione-regulated 93.1 0.71 1.5E-05 47.0 10.3 96 195-296 400-498 (601)
449 PRK08416 7-alpha-hydroxysteroi 93.1 0.53 1.1E-05 42.2 8.5 78 194-273 7-96 (260)
450 TIGR01809 Shik-DH-AROM shikima 93.1 0.27 5.9E-06 45.0 6.6 75 194-274 124-200 (282)
451 PRK10258 biotin biosynthesis p 93.0 0.99 2.1E-05 40.3 10.1 99 188-297 36-141 (251)
452 TIGR00138 gidB 16S rRNA methyl 93.0 0.84 1.8E-05 38.8 9.1 94 195-296 43-142 (181)
453 PRK05855 short chain dehydroge 93.0 0.43 9.2E-06 47.9 8.5 79 194-274 314-402 (582)
454 PRK00258 aroE shikimate 5-dehy 92.9 0.3 6.6E-06 44.6 6.8 96 193-297 121-222 (278)
455 PRK05134 bifunctional 3-demeth 92.9 1.5 3.3E-05 38.6 11.1 99 189-296 43-151 (233)
456 PF13823 ADH_N_assoc: Alcohol 92.9 0.098 2.1E-06 28.3 2.0 22 10-32 1-22 (23)
457 PRK13403 ketol-acid reductoiso 92.9 1.6 3.5E-05 40.6 11.3 87 193-294 14-104 (335)
458 PLN00016 RNA-binding protein; 92.9 1 2.2E-05 42.9 10.6 95 195-297 52-165 (378)
459 PRK09135 pteridine reductase; 92.9 0.65 1.4E-05 40.9 8.7 34 194-228 5-39 (249)
460 PRK12745 3-ketoacyl-(acyl-carr 92.8 0.55 1.2E-05 41.7 8.2 77 196-274 3-90 (256)
461 PRK07411 hypothetical protein; 92.8 0.45 9.6E-06 45.8 8.0 34 195-228 38-71 (390)
462 TIGR03649 ergot_EASG ergot alk 92.8 0.7 1.5E-05 42.0 9.0 96 197-297 1-105 (285)
463 KOG2018 Predicted dinucleotide 92.8 0.53 1.2E-05 43.1 7.8 40 194-233 73-112 (430)
464 PRK08300 acetaldehyde dehydrog 92.8 1.3 2.9E-05 40.8 10.6 92 196-296 5-100 (302)
465 PRK05565 fabG 3-ketoacyl-(acyl 92.8 0.58 1.3E-05 41.2 8.2 78 195-274 5-93 (247)
466 COG2084 MmsB 3-hydroxyisobutyr 92.8 1.6 3.5E-05 39.9 11.1 45 197-242 2-47 (286)
467 PLN02823 spermine synthase 92.8 1.1 2.5E-05 42.0 10.4 99 194-295 103-219 (336)
468 PRK06522 2-dehydropantoate 2-r 92.7 0.49 1.1E-05 43.5 7.9 84 197-286 2-87 (304)
469 PF01210 NAD_Gly3P_dh_N: NAD-d 92.7 0.69 1.5E-05 38.3 8.1 84 197-287 1-91 (157)
470 PRK07775 short chain dehydroge 92.7 0.68 1.5E-05 41.9 8.8 78 195-274 10-97 (274)
471 PRK09496 trkA potassium transp 92.7 1 2.2E-05 43.9 10.6 80 193-276 229-309 (453)
472 PRK00216 ubiE ubiquinone/menaq 92.7 0.73 1.6E-05 40.5 8.7 104 188-297 45-159 (239)
473 PLN02256 arogenate dehydrogena 92.6 1.1 2.5E-05 41.4 10.1 53 186-240 27-79 (304)
474 PRK05708 2-dehydropantoate 2-r 92.5 0.51 1.1E-05 43.7 7.7 94 197-295 4-103 (305)
475 KOG1252 Cystathionine beta-syn 92.5 1.4 3E-05 40.9 10.2 57 188-245 96-156 (362)
476 COG0287 TyrA Prephenate dehydr 92.5 0.85 1.8E-05 41.7 8.9 46 195-240 3-49 (279)
477 TIGR01289 LPOR light-dependent 92.5 0.69 1.5E-05 42.9 8.6 77 195-273 3-90 (314)
478 PLN02986 cinnamyl-alcohol dehy 92.5 0.78 1.7E-05 42.5 9.0 37 194-231 4-41 (322)
479 TIGR01829 AcAcCoA_reduct aceto 92.4 0.73 1.6E-05 40.4 8.4 77 196-274 1-88 (242)
480 PRK07889 enoyl-(acyl carrier p 92.4 0.59 1.3E-05 41.9 7.9 79 194-274 6-95 (256)
481 PF01113 DapB_N: Dihydrodipico 92.4 1.2 2.7E-05 35.2 8.8 92 197-297 2-98 (124)
482 PRK07578 short chain dehydroge 92.4 2.2 4.8E-05 36.3 11.2 87 197-299 2-114 (199)
483 PRK08936 glucose-1-dehydrogena 92.4 0.77 1.7E-05 41.0 8.6 79 194-274 6-95 (261)
484 PF08659 KR: KR domain; Inter 92.4 0.65 1.4E-05 39.4 7.7 78 197-274 2-91 (181)
485 TIGR02632 RhaD_aldol-ADH rhamn 92.3 0.58 1.3E-05 48.4 8.6 79 194-274 413-503 (676)
486 PRK08223 hypothetical protein; 92.3 0.43 9.2E-06 43.7 6.7 35 194-228 26-60 (287)
487 PRK13984 putative oxidoreducta 92.3 0.82 1.8E-05 46.6 9.5 77 192-274 280-378 (604)
488 PF03807 F420_oxidored: NADP o 92.3 2.9 6.3E-05 31.0 10.4 76 197-285 1-81 (96)
489 TIGR02752 MenG_heptapren 2-hep 92.3 0.8 1.7E-05 40.3 8.4 104 187-297 38-152 (231)
490 PRK06997 enoyl-(acyl carrier p 92.3 0.82 1.8E-05 41.1 8.6 78 194-273 5-93 (260)
491 TIGR03215 ac_ald_DH_ac acetald 92.2 1.4 3E-05 40.4 9.9 88 197-296 3-94 (285)
492 PRK07878 molybdopterin biosynt 92.2 0.61 1.3E-05 44.9 7.9 34 195-228 42-75 (392)
493 PRK13656 trans-2-enoyl-CoA red 92.2 0.9 2E-05 43.3 8.9 79 193-275 39-142 (398)
494 cd02440 AdoMet_MTases S-adenos 92.1 1.4 3E-05 32.1 8.5 92 198-295 2-103 (107)
495 PRK12935 acetoacetyl-CoA reduc 92.1 0.87 1.9E-05 40.2 8.5 79 194-274 5-94 (247)
496 PRK14968 putative methyltransf 92.1 0.61 1.3E-05 39.4 7.2 42 192-236 21-62 (188)
497 PRK12480 D-lactate dehydrogena 92.0 1.8 3.8E-05 40.7 10.7 37 194-231 145-181 (330)
498 PRK14188 bifunctional 5,10-met 92.0 1.5 3.3E-05 40.4 9.9 82 186-298 148-232 (296)
499 COG4106 Tam Trans-aconitate me 92.0 1.2 2.6E-05 38.8 8.6 98 186-293 22-126 (257)
500 COG1052 LdhA Lactate dehydroge 91.9 1.7 3.6E-05 40.7 10.3 36 194-230 145-180 (324)
No 1
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-62 Score=431.54 Aligned_cols=339 Identities=77% Similarity=1.291 Sum_probs=326.6
Q ss_pred CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
..++++||++.+++++||.++|+..++|+.+||+||++++++||+|.+.++|..+...+|.++|||++|+|+++|..|++
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 45689999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
+++||+|+..+...|++|++|++++.|+|.........+....+|.+|+.-+|+++|||++..+|+||.+++...+++|+
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 99999999999999999999999999999999998878888789999999999999999999999999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
+..+++.++.+.|.++|+|.|.++.+++++|+++.|+|.|++|++++|-||+.|+.+||++|-+++|++.++++|+++++
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i 242 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI 242 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecC
Q 019139 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 324 (345)
|+.+....+.+.+.+.|++|+|+.|||+|..++..+++.+...+||+-+++|..+.++.+++++++|+.+.++.|+.+|+
T Consensus 243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG 322 (375)
T KOG0022|consen 243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGG 322 (375)
T ss_pred ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEeccc
Confidence 99865557889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccHHHHHHHHhcccc
Q 019139 325 FKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~~ 343 (345)
++.+++++.+++.+.+++.
T Consensus 323 ~K~~~~iP~lV~~y~~~~l 341 (375)
T KOG0022|consen 323 FKSKSDIPKLVKDYMKKKL 341 (375)
T ss_pred ccchhhhhHHHHHHHhCcc
Confidence 9999999999998888764
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.7e-62 Score=438.49 Aligned_cols=332 Identities=64% Similarity=1.097 Sum_probs=320.4
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
|++||++.+++++|++++++++++|++||||||+.++|+||+|.+.++|..|.+ +|.++|||++|+|+++|++|+.++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 468999999999999999999999999999999999999999999999999888 9999999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+..+.-+|+.|++|+++++|+|.........|.. .+|.++++.++.+++|+++.++|+||.++++.++++++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99999999999999999999999999998888888876 99999999999999999999999999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
+++.++.+.|...|.+.++.+.+++++|++|.|+|.|++|++++|-|+..|+.+||+++.+++|+++++++|+++++|.+
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcc
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 327 (345)
+.. +..+.+.+++++++|++||++|....+++++.++.+ ||+.+++|....+..+++++..|+.+.+|+|+++|+...
T Consensus 239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p 316 (366)
T COG1062 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP 316 (366)
T ss_pred hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence 732 689999999999999999999999999999999999 599999999888889999999998899999999999999
Q ss_pred cccHHHHHHHHhcccc
Q 019139 328 RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 328 ~~~~~~~~~~~~~g~~ 343 (345)
+.|++.++++|.+|+.
T Consensus 317 ~~diP~lv~~y~~Gkl 332 (366)
T COG1062 317 RSDIPRLVDLYMAGKL 332 (366)
T ss_pred ccchhHHHHHHHcCCC
Confidence 9999999999999985
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.2e-61 Score=441.92 Aligned_cols=302 Identities=33% Similarity=0.487 Sum_probs=276.3
Q ss_pred ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
+++|||+++.+.++++++++++.|+|+++||+|||.|+|+||+|++.++|.++...+|++||||.+|+|+++|++|+.|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred CCCEEEe-cCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139 87 PGDHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (345)
Q Consensus 87 ~Gd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (345)
+||||.+ +...+|++|.||++|++++|++... .|.+ .+ |+||||+++|+.+++++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~-~~------------------GGyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYT-TD------------------GGYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---ccee-ec------------------CcceeEEEEchHHeEECCC
Confidence 9999988 8899999999999999999999765 3333 44 4999999999999999999
Q ss_pred CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
++++.+||.+.|++.|.|++| +..+++||++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999998 55999999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG 324 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 324 (345)
..+ ++..+.+.+. +|+++|+++ +.+++.++++|+++ |+++++|.........++...++. +++|.||..++
T Consensus 217 ~~~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 217 SSD--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred cCC--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence 874 5566666553 999999999 78899999999998 999999996423456688887777 99999999986
Q ss_pred CcccccHHHHHHHHhcccc
Q 019139 325 FKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~~ 343 (345)
+ .|.++++++..+|++
T Consensus 289 ~---~d~~e~l~f~~~g~I 304 (339)
T COG1064 289 R---ADLEEALDFAAEGKI 304 (339)
T ss_pred H---HHHHHHHHHHHhCCc
Confidence 5 889999999988875
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-55 Score=388.37 Aligned_cols=317 Identities=29% Similarity=0.446 Sum_probs=280.8
Q ss_pred CCCCCcceeeeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEe
Q 019139 1 MSTEGQVITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78 (345)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~ 78 (345)
|+++..|.++++|.+..++. ++++.+++.|+|+++||+||++|+||||+|++.+.|.++..++|+++|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 67788899999999999988 5777999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCEEEe-cCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139 79 GEGVTEVQPGDHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (345)
Q Consensus 79 G~~v~~~~~Gd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 157 (345)
|++|++|++||||-+ ....+|.+|.||+++++++|+..... ..|.. .+| ..++|+|++|+++++
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~-~DG-------------t~~~ggf~~~~~v~~ 145 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVY-HDG-------------TITQGGFQEYAVVDE 145 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccc-cCC-------------CCccCccceeEEEee
Confidence 999999999999954 66799999999999999999964432 33433 444 777889999999999
Q ss_pred ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHH
Q 019139 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK 236 (345)
Q Consensus 158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~~~~ 236 (345)
.++++||++++++.||.+.|+..|.|.+| ....+.||+++.|.|+|++|++++|+||++|+ +|+++++++ +|.+..+
T Consensus 146 ~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~ 223 (360)
T KOG0023|consen 146 VFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIK 223 (360)
T ss_pred eeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHH
Confidence 99999999999999999999999999988 77778899999999997799999999999999 999999987 6677778
Q ss_pred hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-cc
Q 019139 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GR 315 (345)
Q Consensus 237 ~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~ 315 (345)
.||++.+++..+ +.++.+.+.+.+++++|-+.+. +...+..++.+++.+ |++|++|.+.. ++.++++.++. .+
T Consensus 224 ~LGAd~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~ 297 (360)
T KOG0023|consen 224 SLGADVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRK 297 (360)
T ss_pred hcCcceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccE
Confidence 899999998874 2678888888888888888776 445699999999998 99999999643 88899999988 99
Q ss_pred EEEEeeecCCcccccHHHHHHHHhcccc
Q 019139 316 VWKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 316 ~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
+|.||..|++ .+.++++++..++.+
T Consensus 298 ~I~GS~vG~~---ket~E~Ldf~a~~~i 322 (360)
T KOG0023|consen 298 SIKGSIVGSR---KETQEALDFVARGLI 322 (360)
T ss_pred EEEeeccccH---HHHHHHHHHHHcCCC
Confidence 9999999977 677777887776643
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.5e-53 Score=374.35 Aligned_cols=307 Identities=27% Similarity=0.390 Sum_probs=272.1
Q ss_pred eeeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCC---CCCcccCcceeEEEEEeCCCCCC
Q 019139 9 TCKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEG---LFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~---~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
+|+|+++.+++. +.++++|.|++ .|+||+|++.++|||++|+|++....... +.|+++|||.+|+|+++|++|++
T Consensus 4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~ 82 (354)
T KOG0024|consen 4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH 82 (354)
T ss_pred ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence 589999999988 99999999987 99999999999999999999997654322 68999999999999999999999
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
+++||||++.|..+|+.|.+|++|++|+|+...+. +....+| ++++|++.+++.++++|
T Consensus 83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G------------------~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG------------------TLAEYYVHPADFCYKLP 141 (354)
T ss_pred cccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC------------------ceEEEEEechHheeeCC
Confidence 99999999999999999999999999999998874 2333555 99999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
++++++++|.+. ++++++||. +++.++.|++|||+|+|++|+++...||++|+.+|++++..+.|+++++++|++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999887 799999987 889999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCC--ccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139 245 NPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT 320 (345)
Q Consensus 245 ~~~~~~--~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 320 (345)
+..... +.+.+.+....+. .+|+.|||+|...+++.++..++.+ |++++.|.. ....+|++.+... +++++|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~g~ 296 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLRGS 296 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeeeee
Confidence 665522 3334444444443 6999999999999999999999997 999999974 4578999999887 9999999
Q ss_pred eecCCcccccHHHHHHHHhccccCC
Q 019139 321 AFGGFKSRSQVPWLVDKYMKKVNLM 345 (345)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~~ 345 (345)
.-+ .+.+++.+++++.+|++-|
T Consensus 297 fry---~~~~y~~ai~li~sGki~~ 318 (354)
T KOG0024|consen 297 FRY---CNGDYPTAIELVSSGKIDV 318 (354)
T ss_pred eee---ccccHHHHHHHHHcCCcCc
Confidence 744 3368999999999998743
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=3.4e-50 Score=383.98 Aligned_cols=339 Identities=56% Similarity=1.042 Sum_probs=279.9
Q ss_pred CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (345)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~ 83 (345)
.+|++|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus 6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence 46789999999999888999999999999999999999999999999999887642 35789999999999999999999
Q ss_pred CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccc--cCCCccccccCcceeeeeEEeecceEE
Q 019139 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS--INGKPIYHFMGTSTFSQYTVVHDVSVA 161 (345)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~--~~~~~~~~~~~~g~~a~~~~v~~~~~~ 161 (345)
.|++||||++.+..+|+.|.+|..++++.|.+....+..+....+|..++. ..+..+++....|+|+||+++|.+.++
T Consensus 86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 999999999999999999999999999999986532110000000100000 001122223335799999999999999
Q ss_pred EcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (345)
Q Consensus 162 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 241 (345)
++|+++++++++.+++++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+++|+++++++++++.++++|++
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 245 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGIT 245 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCc
Confidence 99999999999999999999999887888999999999999999999999999999996799999999999999999999
Q ss_pred eEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEee
Q 019139 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTA 321 (345)
Q Consensus 242 ~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 321 (345)
.++++.+...++.+.+.+++++++|++||++|++.++..++.++++++|+++++|.......+++++..++++++|.|+.
T Consensus 246 ~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 325 (381)
T PLN02740 246 DFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSV 325 (381)
T ss_pred EEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEe
Confidence 99987653234677788777668999999999988899999999882299999998654334566666555689999998
Q ss_pred ecCCcccccHHHHHHHHhcccc
Q 019139 322 FGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
.+++....+++++++++.+|++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~i 347 (381)
T PLN02740 326 FGDFKGKSQLPNLAKQCMQGVV 347 (381)
T ss_pred cCCCCcHHHHHHHHHHHHcCCC
Confidence 8776555788999999998864
No 7
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=4.3e-50 Score=381.60 Aligned_cols=333 Identities=68% Similarity=1.173 Sum_probs=277.9
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++...+++++++++|.|+|.++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 88999999888899999999999999999999999999999999988776556899999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
||++.+..+|+.|.+|+.++++.|.+.......|+. .+|..++..+|.+.++..+.|+|+||+++|.+.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999988899999999999999999875432222322 2221122222333333333479999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
++++.+++++.|||+++.+..+++++++|+|+|+|++|++++|+|+.+|+.+|++++.++++++.++++|++.++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998888899999999999999999999999999999679999999999999999999999987643
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcccc
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRS 329 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 329 (345)
..++.+.+.+++++++|++||++|++.++..+++++++++|+++.+|.......+++++..++.+..+.|+..++.....
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 34566777777777899999999988889999999987339999999854334566666666556678888766554456
Q ss_pred cHHHHHHHHhcccc
Q 019139 330 QVPWLVDKYMKKVN 343 (345)
Q Consensus 330 ~~~~~~~~~~~g~~ 343 (345)
++.++++++++|++
T Consensus 321 ~~~~~~~~~~~g~i 334 (368)
T TIGR02818 321 ELPGIVEQYMKGEI 334 (368)
T ss_pred HHHHHHHHHHCCCC
Confidence 88999999998864
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=8.8e-50 Score=379.95 Aligned_cols=329 Identities=42% Similarity=0.711 Sum_probs=276.5
Q ss_pred eeeeeeccCC--------CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCC
Q 019139 10 CKAAVAWEPN--------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (345)
Q Consensus 10 ~~a~~~~~~~--------~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (345)
|||+++.+.| +.++++++|.|+|+++||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR-PLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC-CCCccCCccceeEEEEeCCC
Confidence 7899999865 34899999999999999999999999999999999887543 47899999999999999999
Q ss_pred CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEE
Q 019139 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (345)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 161 (345)
++.+++||+|++.+...|+.|.+|+.++++.|.+.......|.. .+|...+..++..+.+..+.|+|+||+.+|.+.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999888889999999999999999876432222221 11111111111111111223699999999999999
Q ss_pred EcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (345)
Q Consensus 162 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 241 (345)
++|+++++++|+.+++++.|||+++.+..+++++++|+|+|+|++|++++|+|+.+|+++|++++++++++++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999988888899999999999999999999999999996699999999999999999999
Q ss_pred eEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT 320 (345)
Q Consensus 242 ~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 320 (345)
.++++.+ .++.+.+.+++++++|++||++|++.++..++++++++ |+++.+|.......++++...++. +++|.|+
T Consensus 239 ~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 239 ATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred eEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 9998876 56777888887778999999999887899999999997 999999985433456788887777 9999999
Q ss_pred eecCCcccccHHHHHHHHhcccc
Q 019139 321 AFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
+.+++...++++++++++++|++
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i 338 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRL 338 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCC
Confidence 88766556789999999998875
No 9
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-49 Score=378.93 Aligned_cols=334 Identities=80% Similarity=1.303 Sum_probs=282.5
Q ss_pred eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
+|||+++.+.+++++++++|.|+|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999888889999999999999999999999999999999998877655789999999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|+..+..+|+.|.+|++++++.|.+.....+.|.. .+|..++..+|.+.++..+.|+|+||+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999988899999999999999999876533223332 222222222344444444567999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
+++++.+++++.|||+++.+..+++++++|+|+|+|++|++++|+|+.+|+.+|+++++++++++.++++|+++++++.+
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999999878889999999999999999999999999999967999999999999999999999998876
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCccc
Q 019139 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 328 (345)
Q Consensus 249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 328 (345)
.++++.+.+.+++++++|++||++|++..+..+++++++++|+++.+|....+..+++++..+..+.++.|+..+.+...
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 33357777888877799999999998777999999998733999999985433345566655555678889887777667
Q ss_pred ccHHHHHHHHhcccc
Q 019139 329 SQVPWLVDKYMKKVN 343 (345)
Q Consensus 329 ~~~~~~~~~~~~g~~ 343 (345)
+++.++++++++|++
T Consensus 321 ~~~~~~~~~~~~g~l 335 (368)
T cd08300 321 SQVPKLVEDYMKGKI 335 (368)
T ss_pred HHHHHHHHHHHcCCC
Confidence 889999999998864
No 10
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=9.9e-50 Score=379.34 Aligned_cols=336 Identities=67% Similarity=1.169 Sum_probs=281.8
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
++|||+++.+++++++++++|.|+|+++||+||+.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 37999999998888999999999999999999999999999999999887765578999999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||||+..+...|+.|.+|+.++++.|.+.......|....++..++...|...+++...|+|+||+++|.+.++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99999999999999999999999999986432222222111111111223333444445799999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
++++++.+++++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999999999999888888999999999999999999999999999986799999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcc
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 327 (345)
+....+.+.+++++++++|++||++|+...+..+++++++++|+++++|.......+++++..++++++|.|++.+++..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 53235666777777668999999999887789999999992299999998654345667766555699999998877765
Q ss_pred cccHHHHHHHHhcccc
Q 019139 328 RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 328 ~~~~~~~~~~~~~g~~ 343 (345)
+.+++++++++++|+.
T Consensus 321 ~~~~~~~~~~~~~g~~ 336 (369)
T cd08301 321 KTDLPNLVEKYMKKEL 336 (369)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 6788999999988864
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.3e-48 Score=368.45 Aligned_cols=322 Identities=36% Similarity=0.588 Sum_probs=273.5
Q ss_pred eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
+|||+++.+++++++++++|.|+|+++||+|||.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 599999999998899999999999999999999999999999999988654 2478999999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|++.+...|+.|.+|.++++++|...... .......+| .......+.|+|+||+.+|.+.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence 9999999999999999999999999854321 000000001 0000001236999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
+++|+.+++++.++|+++.+..+++++++|+|+|+|++|++++|+|+++|+++|++++++++++++++++|++.++++.+
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988878888999999999999999999999999999966999999999999999999999998876
Q ss_pred CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 326 (345)
Q Consensus 249 ~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~ 326 (345)
.++.+.+.+++++ ++|++||++|++.++..++++++++ |+++.+|.......+++++..++. ++++.+++.+...
T Consensus 231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 5677788888877 8999999999877799999999997 999999985433356778777777 9999999765443
Q ss_pred ccccHHHHHHHHhcccc
Q 019139 327 SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 327 ~~~~~~~~~~~~~~g~~ 343 (345)
..++++++++++++|++
T Consensus 308 ~~~~~~~~~~l~~~g~l 324 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRL 324 (358)
T ss_pred cHHHHHHHHHHHHcCCC
Confidence 45778999999998874
No 12
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4.5e-48 Score=367.41 Aligned_cols=332 Identities=65% Similarity=1.124 Sum_probs=280.4
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
++|||+++.+.+++++++++|.|+|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4689999998888899999999999999999999999999999999988765 457899999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+..+...|++|.+|..++++.|.+.... ..|.. .++...+...|...+++.+.|+|+||++++.+.++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999988899999999999999999986543 22332 33322222233333333445799999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
++++++.+++++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++.+++..
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999887888999999999999999999999999999996799999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcc
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 327 (345)
+...++.+.+.+++++++|++||++|+...+..+++++++++|+++.+|... +...++++..++.+++|.|++++++..
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~ 316 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLILGRTWKGSFFGGFKS 316 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhhCCEEEeeecCCCCh
Confidence 5333456677777767899999999987778999999987239999999853 334567776766699999999887755
Q ss_pred cccHHHHHHHHhcccc
Q 019139 328 RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 328 ~~~~~~~~~~~~~g~~ 343 (345)
..++.+++++++++++
T Consensus 317 ~~~~~~~~~~~~~~~~ 332 (365)
T cd08277 317 RSDVPKLVSKYMNKKF 332 (365)
T ss_pred HHHHHHHHHHHHCCCc
Confidence 6788999999988753
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.5e-47 Score=365.22 Aligned_cols=330 Identities=54% Similarity=1.012 Sum_probs=268.4
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
..|||+++.++++.++++++|.|+|+++||+|||.++|||++|++.+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 679999999888779999999999999999999999999999999887642 36789999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+..+..+|+.|.+|++++++.|.+.... ..|....+....+...|...++....|+|+||+.+|.+.++++|+++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 99999998899999999999999999874321 11111000000000011111111123699999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
++++++.+.+++.++|+++.+..++++|++|+|+|+|++|++++|+|+++|+..|+++++++++.++++++|++.+++++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~ 246 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN 246 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEccc
Confidence 99999999889899998887778899999999999999999999999999996688888899999999999999999876
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh-hhhcc-ccEEEEeeecCC
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVT-GRVWKGTAFGGF 325 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~~-~~~i~g~~~~~~ 325 (345)
+.+.++.+.+.+++++++|++||++|....+..+++.+++++|+++.+|.... ...+++ ..++. +++|.|+..+.+
T Consensus 247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~--~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
T PLN02827 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA--KPEVSAHYGLFLSGRTLKGSLFGGW 324 (378)
T ss_pred ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC--CccccccHHHHhcCceEEeeecCCC
Confidence 53245667777777668999999999877789999999993299999998543 234433 23444 999999988766
Q ss_pred cccccHHHHHHHHhcccc
Q 019139 326 KSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~ 343 (345)
....++.++++++++|++
T Consensus 325 ~~~~~~~~~~~~~~~g~i 342 (378)
T PLN02827 325 KPKSDLPSLVDKYMNKEI 342 (378)
T ss_pred chhhhHHHHHHHHHcCCC
Confidence 556788899999998875
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.1e-46 Score=354.24 Aligned_cols=302 Identities=28% Similarity=0.437 Sum_probs=259.6
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|||+++.+++. ++++++|.|+|+++||+||+.++++|++|++.+.+.+.. ...|.++|||++|+|+++|++++.+++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 78999998765 999999999999999999999999999999988776432 2357999999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|+..+...|+.|.+|+.++++.|.+... ..|.. .+ |+|+||+.+|.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-CC------------------CcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999987543 12322 23 4999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
+++|+.+++++.|||+++ ....+++|++|+|+|+|++|++++|+|+.+|+++|+++++++++++.++++|++.++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999987 5677899999999999999999999999999954999999999999999999999998876
Q ss_pred CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 326 (345)
Q Consensus 249 ~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~ 326 (345)
.+ .+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|... ...+.. ...++. +++|.|++.++.
T Consensus 218 --~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~-~~~~~~~~~~i~g~~~~~~- 290 (339)
T cd08239 218 --DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG-ELTIEV-SNDLIRKQRTLIGSWYFSV- 290 (339)
T ss_pred --ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC-CcccCc-HHHHHhCCCEEEEEecCCH-
Confidence 34 5667777777 8999999999988778999999997 9999999754 223222 234555 999999986543
Q ss_pred ccccHHHHHHHHhcccc
Q 019139 327 SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 327 ~~~~~~~~~~~~~~g~~ 343 (345)
+++.++++++++|++
T Consensus 291 --~~~~~~~~~~~~g~i 305 (339)
T cd08239 291 --PDMEECAEFLARHKL 305 (339)
T ss_pred --HHHHHHHHHHHcCCC
Confidence 678999999998864
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.3e-46 Score=354.31 Aligned_cols=309 Identities=28% Similarity=0.382 Sum_probs=253.2
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCc-ccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC-ILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|+++++..++...++++.+.|.+.|+||+|||.++|||++|++.++|..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 56777777765455788877778999999999999999999999999877666666 99999999999999 77889999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceec-CCcccccccCCCccccccCcceeeeeEEeecceEEE-cCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM-NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK-IDPQ 166 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~-iP~~ 166 (345)
|||++.+..+|+.|.+|+++.++.|.+........... .+ |+|+||+++|.++++. +|++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~------------------G~~aEyv~vp~~~~~~~~pd~ 141 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGID------------------GGFAEYVRVPADFNLAKLPDG 141 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCC------------------CceEEEEEeccccCeecCCCC
Confidence 99999999999999999999999999554321111110 23 4999999999755555 5888
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~ 245 (345)
+ +.+++++..++++++++........++++|+|+|+|++|++++++|+.+|+.+|++++.+++|++++++ .|++.+++
T Consensus 142 ~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~ 220 (350)
T COG1063 142 I-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVN 220 (350)
T ss_pred C-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeec
Confidence 8 556666666999998875455556666699999999999999999999999999999999999999998 66666666
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
..+ ++....+.+.+++ ++|++|||+|.+.++.++++.++++ |+++++|.+..... .++...++. ++++.|+...
T Consensus 221 ~~~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~ 296 (350)
T COG1063 221 PSE--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP 296 (350)
T ss_pred Ccc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC
Confidence 554 2566778888888 9999999999999999999999997 99999999754332 677777777 9999999531
Q ss_pred CCcccccHHHHHHHHhccccC
Q 019139 324 GFKSRSQVPWLVDKYMKKVNL 344 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~~~ 344 (345)
....+++.+++++++|+..
T Consensus 297 --~~~~~~~~~~~ll~~g~i~ 315 (350)
T COG1063 297 --SGREDFERALDLLASGKID 315 (350)
T ss_pred --CCcccHHHHHHHHHcCCCC
Confidence 2336899999999999763
No 16
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.6e-46 Score=349.43 Aligned_cols=283 Identities=27% Similarity=0.385 Sum_probs=246.5
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++.+.+.+ ++++++|.|+|++|||||||.++|||+.|.+.+.|.. +..++|+++|.|++|+|+++|++|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999987765 8899999999999999999999999999999999973 3447899999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+..+ ..| . .|+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~-~~~---------------------------~------------------~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-GVG---------------------------R------------------DGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-CCC---------------------------C------------------CCcceeEEEecHHHceeCCCC
Confidence 999998542 000 1 249999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+|+++||++++++.|||+++....++++|++|||+|+ |++|.+++|+||++|+ .++++++++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999899999999999987 9999999999999998 6777777777777999999999999
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
+.+ .++.+.+++++++ ++|+|||++|+.. +..++..|+++ |+++.+|..++...+.++...++. .+++.|+...
T Consensus 194 y~~--~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 194 YRE--EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred CCc--ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence 987 6699999999999 9999999999966 88899999998 999999986534566777777766 8899998876
Q ss_pred CC--cc-cccHHHHHHHHhcccc
Q 019139 324 GF--KS-RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 324 ~~--~~-~~~~~~~~~~~~~g~~ 343 (345)
.. .. .+.+.++.+++++|++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~g~l 292 (326)
T COG0604 270 SRDPEALAEALAELFDLLASGKL 292 (326)
T ss_pred ecchHHHHHHHHHHHHHHHcCCC
Confidence 44 11 2445667888888764
No 17
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.8e-45 Score=348.78 Aligned_cols=307 Identities=23% Similarity=0.342 Sum_probs=255.5
Q ss_pred CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
.-|+++.++.+.+...++++.+++.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 45677888888877777999999999999999999999999999999999887654467899999999999999999999
Q ss_pred CCCCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCC-C---CceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139 85 VQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGAT-G---AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (345)
Q Consensus 85 ~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~-~---~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 159 (345)
|++||+|++.+. .+|+.|.+|+.++++.|++..... . .|.. .+ |+|+||+++|.+.
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~ 148 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTK-NY------------------GGYSDMIVVDQHF 148 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCc-CC------------------CccceEEEEchHH
Confidence 999999986544 589999999999999999754310 0 0111 12 4999999999999
Q ss_pred EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhc
Q 019139 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNF 238 (345)
Q Consensus 160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~~~~ 238 (345)
++++|+++++++++.+++++.|+|+++......++|++|+|.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++
T Consensus 149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~ 227 (360)
T PLN02586 149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL 227 (360)
T ss_pred eeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhC
Confidence 999999999999999999999999988666667899999999999999999999999999 77777666554 4566889
Q ss_pred CCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE
Q 019139 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW 317 (345)
Q Consensus 239 g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i 317 (345)
|++.+++..+ . +.+.+.++ ++|++||++|+..++..++++++++ |+++.+|... ...++++..++. ++++
T Consensus 228 Ga~~vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i 298 (360)
T PLN02586 228 GADSFLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE--KPLELPIFPLVLGRKLV 298 (360)
T ss_pred CCcEEEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC--CCCccCHHHHHhCCeEE
Confidence 9999988654 1 23444443 6999999999877799999999997 9999999753 245677777776 8888
Q ss_pred EEeeecCCcccccHHHHHHHHhcccc
Q 019139 318 KGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 318 ~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
.|+..++. .+++++++++++|++
T Consensus 299 ~g~~~~~~---~~~~~~~~li~~g~i 321 (360)
T PLN02586 299 GGSDIGGI---KETQEMLDFCAKHNI 321 (360)
T ss_pred EEcCcCCH---HHHHHHHHHHHhCCC
Confidence 89876543 678999999998875
No 18
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-45 Score=346.32 Aligned_cols=302 Identities=22% Similarity=0.319 Sum_probs=249.6
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-CCCC--CCCCCcccCcceeEEEEEeCCCCCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
..+||++++++++ ++++++|.| +.++||||||.++|||++|++++. |..+ ..++|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 4689999998888 999999997 689999999999999999999875 4332 2357999999999999999 6789
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
|++||+|+..+..+|+.|.+|+.++++.|++... .|.... +....|+|+||++++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~--------------~~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMY--------------FPHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccc--------------cCCCCCceeeeEEechHHeEECC
Confidence 9999999999999999999999999999987543 221100 00012599999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
+++++++++ +..++++||+++ ......++++|+|+|+|++|++++|+|+++|+++|++++++++++++++++|++.++
T Consensus 142 ~~l~~~~aa-~~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMA-FAEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHH-hhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 999987665 445788999987 444566899999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
++++ .++.+.. +. .+++|++||++|++.++..++++++++ |+++.+|... ...++++..++. ++++.|+...
T Consensus 220 ~~~~--~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 220 NPQN--DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG--APPEFPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred cCCc--ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC--CCCccCHHHHHhCCcEEEEEeec
Confidence 8876 3443322 22 236999999999987799999999998 9999999743 245677777776 9999998642
Q ss_pred CCcccccHHHHHHHHhcccc
Q 019139 324 GFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~~ 343 (345)
.+++.++++++++|++
T Consensus 293 ----~~~~~~~~~l~~~g~i 308 (343)
T PRK09880 293 ----TEEFNTAVSWLANGVI 308 (343)
T ss_pred ----cccHHHHHHHHHcCCC
Confidence 3678999999998864
No 19
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=8.1e-45 Score=347.48 Aligned_cols=311 Identities=25% Similarity=0.365 Sum_probs=245.3
Q ss_pred eeeeeeeccCCCCeEEEEeecCCCC-------CCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCC
Q 019139 9 TCKAAVAWEPNKPLVIEDVQVAPPQ-------AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (345)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (345)
-|||+++.++++ ++++++|.|+|+ +|||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 489999999886 999999999874 68999999999999999999988653 246899999999999999999
Q ss_pred CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCC---CCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (345)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 158 (345)
|++|++||||++.+...|+.|.+|++++++.|.+..... ..|.... | ...|+|+||+++|..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~--------------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G--------------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C--------------CCCCceEEEEEechh
Confidence 999999999999999999999999999999999743210 0111000 0 012599999999964
Q ss_pred --eEEEcCCCCCh----hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 019139 159 --SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (345)
Q Consensus 159 --~~~~iP~~l~~----~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~ 232 (345)
.++++|++++. .+++++..++.++|+++ ...+++++++|+|.|+|++|++++|+|+.+|++.|++++.+++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998753 34667777899999987 457889999999998899999999999999996677677888999
Q ss_pred HHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCH--------------HHHHHHHHHhccCCeEEEEecc
Q 019139 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 233 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~--------------~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
++++++|++. ++... ..++.+.+.+++++ ++|++||++|.+ .++++++++++++ |+++.+|.
T Consensus 224 ~~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~ 300 (393)
T TIGR02819 224 AQARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL 300 (393)
T ss_pred HHHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence 9999999974 54432 13566777777777 899999999985 4799999999998 99999998
Q ss_pred CCCCC-----------ceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139 298 AASGQ-----------EISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 298 ~~~~~-----------~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
+..+. .+++....++. ++++.|+. ....+...++++++++|++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i 355 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRV 355 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCC
Confidence 63211 22333444444 67777632 1111334678899988874
No 20
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=5.2e-44 Score=340.39 Aligned_cols=332 Identities=59% Similarity=0.989 Sum_probs=273.4
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
.+|||+++..++++++++++|.|+|.++||+||+.++++|++|.+.+.|.++ ..+|.++|||++|+|+++|++++.+++
T Consensus 6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 84 (373)
T cd08299 6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKP 84 (373)
T ss_pred ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCC
Confidence 4699999999888899999999999999999999999999999999988763 346889999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|++.+..+|++|.+|++++++.|+........|.. .++..++..+|.+..++.+.|+|+||++++.+.++++|+++
T Consensus 85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 99999988899999999999999999865432112222 22322333344444444456899999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
++.+++.+++++.+||+++....+++++++|+|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++.+++..
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~ 243 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ 243 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence 99999999999999999888888999999999998899999999999999986799999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHh-ccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK 326 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 326 (345)
+...++.+.+.+++.+++|+++|++|++..+..++..+ +++ |+++.+|.......+++++..+..++++.|++.+.+.
T Consensus 244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 322 (373)
T cd08299 244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWK 322 (373)
T ss_pred ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCc
Confidence 53234666777776668999999999877678877765 576 9999999854333566666544458899999887765
Q ss_pred ccccHHHHHHHHhccc
Q 019139 327 SRSQVPWLVDKYMKKV 342 (345)
Q Consensus 327 ~~~~~~~~~~~~~~g~ 342 (345)
...++.++++.+.++.
T Consensus 323 ~~~~~~~~~~~~~~~~ 338 (373)
T cd08299 323 SKDSVPKLVADYMAKK 338 (373)
T ss_pred cHHHHHHHHHHHHcCC
Confidence 5567777777766553
No 21
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.8e-44 Score=341.49 Aligned_cols=300 Identities=24% Similarity=0.323 Sum_probs=239.8
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++...+.+++++++|.|+|+++||||||.|+|||++|++.++|.++. ..+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 688998865545999999999999999999999999999999999987532 246899999999999999999 9999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+..+...|+.|.+|+.++++.|...... ..|....+ |+|+||+.+|++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------------GFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC------------------ccceeEEEeccccEEECCCC
Confidence 999999988889999999999999999865421 12221122 49999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHh------hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHh
Q 019139 167 APLDKVCLLGCGVPTGLGAVWN------TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKN 237 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~------~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~---~~~~~~~~~~ 237 (345)
++ +++++..+++++++++.. ....+++++|+|+|+|++|++++|+||.+|+ +|+++++ ++++++++++
T Consensus 141 ~~--~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA--DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC--cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 444444566665554322 2235789999999999999999999999999 7998887 6789999999
Q ss_pred cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecC----hhhhcc
Q 019139 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR----PFQLVT 313 (345)
Q Consensus 238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~----~~~~~~ 313 (345)
+|++. +++.+ .++.+ . . ..+++|++||++|++..+..+++.++++ |+++++|...+...++++ ...++.
T Consensus 218 ~Ga~~-v~~~~--~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 218 LGATY-VNSSK--TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred cCCEE-ecCCc--cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 99986 56554 23332 1 1 2248999999999877799999999998 999999986542355565 345555
Q ss_pred -ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139 314 -GRVWKGTAFGGFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 314 -~~~i~g~~~~~~~~~~~~~~~~~~~~~g~ 342 (345)
+++|.|+..++. ++++++++++.+++
T Consensus 291 k~~~i~g~~~~~~---~~~~~~~~~l~~~~ 317 (355)
T cd08230 291 GNKALVGSVNANK---RHFEQAVEDLAQWK 317 (355)
T ss_pred cCcEEEEecCCch---hhHHHHHHHHHhcc
Confidence 999999876543 67888888887765
No 22
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.1e-44 Score=339.67 Aligned_cols=300 Identities=24% Similarity=0.329 Sum_probs=248.5
Q ss_pred eeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 019139 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (345)
Q Consensus 12 a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V 91 (345)
+++..+.+.++++.+++.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 45555555568889999999999999999999999999999998876444578999999999999999999999999999
Q ss_pred EecCcC-CCCCCccccCCCCCCCCCcCCCC----CCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 92 IPCYQA-ECRECKFCKSGKTNLCGKVRGAT----GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 92 ~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~----~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
++.+.. +|+.|.+|++++++.|++..... ..|.. .+ |+|+||+++|++.++++|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~~~~lP~~ 149 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTR-NQ------------------GGYSDVIVVDHRFVLSIPDG 149 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCc-CC------------------CccccEEEEchHHeEECCCC
Confidence 866554 69999999999999999764310 01111 12 49999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEe
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFV 244 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i 244 (345)
++++++++++++..|+|+++..... .+++++|+|.|+|++|++++|+|+++|+ +|++++.+++ +.+.++++|++.++
T Consensus 150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i 228 (375)
T PLN02178 150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL 228 (375)
T ss_pred CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence 9999999999999999998754433 3689999999999999999999999999 7888877654 47788899999998
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
++.+ . +.+.+.++ ++|++||++|.+.++..++++++++ |+++.+|... .+.++++..++. +++|.|+..+
T Consensus 229 ~~~~--~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~ 299 (375)
T PLN02178 229 VTTD--S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KPLDLPIFPLVLGRKMVGGSQIG 299 (375)
T ss_pred cCcC--H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CCCccCHHHHHhCCeEEEEeCcc
Confidence 8654 1 34444443 7999999999987789999999997 9999999753 346677777776 9999999865
Q ss_pred CCcccccHHHHHHHHhcccc
Q 019139 324 GFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~~ 343 (345)
+. +++.++++++++|++
T Consensus 300 ~~---~~~~~~~~l~~~g~i 316 (375)
T PLN02178 300 GM---KETQEMLEFCAKHKI 316 (375)
T ss_pred CH---HHHHHHHHHHHhCCC
Confidence 43 678899999999875
No 23
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.4e-43 Score=335.63 Aligned_cols=315 Identities=22% Similarity=0.282 Sum_probs=259.7
Q ss_pred CCCCCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCC
Q 019139 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 80 (345)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~ 80 (345)
|.+-....+++|+++..+++++++++++.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~ 80 (357)
T PLN02514 1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS 80 (357)
T ss_pred CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence 44445566799999999999999999999999999999999999999999999988765446789999999999999999
Q ss_pred CCCCCCCCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139 81 GVTEVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (345)
Q Consensus 81 ~v~~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 159 (345)
+++.|++||+|++.+. .+|+.|.+|++++++.|.+..+....+. ..| ....|+|+||+++|.+.
T Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~--~~g-------------~~~~G~~aey~~v~~~~ 145 (357)
T PLN02514 81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY--TDG-------------KPTQGGFASAMVVDQKF 145 (357)
T ss_pred CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc--cCC-------------ccCCCccccEEEEchHH
Confidence 9999999999986554 4799999999999999987532100000 001 11235999999999999
Q ss_pred EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc
Q 019139 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF 238 (345)
Q Consensus 160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~ 238 (345)
++++|+++++++++.+++++.|||+++......++|++|+|+|+|++|++++|+|+.+|+ ++++++.++++++.+ +++
T Consensus 146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~ 224 (357)
T PLN02514 146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHL 224 (357)
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhc
Confidence 999999999999999999999999988666667899999999889999999999999999 788777777666544 679
Q ss_pred CCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE
Q 019139 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW 317 (345)
Q Consensus 239 g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i 317 (345)
|++.+++..+ . +.+.+.+. ++|++||++|...++..++++++++ |+++.+|... ...++++..++. ++++
T Consensus 225 Ga~~~i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i 295 (357)
T PLN02514 225 GADDYLVSSD--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN--TPLQFVTPMLMLGRKVI 295 (357)
T ss_pred CCcEEecCCC--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCcccHHHHhhCCcEE
Confidence 9988877643 1 23444443 7999999999877799999999997 9999999853 245677777776 9999
Q ss_pred EEeeecCCcccccHHHHHHHHhcccc
Q 019139 318 KGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 318 ~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
.|++.++. .+++++++++++|+.
T Consensus 296 ~g~~~~~~---~~~~~~~~~~~~g~l 318 (357)
T PLN02514 296 TGSFIGSM---KETEEMLEFCKEKGL 318 (357)
T ss_pred EEEecCCH---HHHHHHHHHHHhCCC
Confidence 99987643 678999999998863
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=9.4e-44 Score=335.82 Aligned_cols=300 Identities=30% Similarity=0.448 Sum_probs=257.0
Q ss_pred eeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCC-CCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 019139 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (345)
Q Consensus 13 ~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V 91 (345)
+++.+++++++++++|.|+|+++||+|||.++|+|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 567778877999999999999999999999999999999887443 3333578999999999999999999877 99999
Q ss_pred EecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC------
Q 019139 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------ 165 (345)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~------ 165 (345)
++.+..+|+.|.+|++++++.|.+... .|.. .+ |+|+||+.+|.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcC-CC------------------CcccceEEechHHeEECCccccccc
Confidence 999999999999999999999987543 2221 22 4999999999999999999
Q ss_pred CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
++++++++.+.+++.++|+++. ...++++++|+|+|+|++|++++|+|+++|+ +|++++++++++++++++|++.+++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999999999999999874 5788999999999999999999999999999 7999999999999999999999988
Q ss_pred CCCCC-ccHHHHHHhhcCC-Ccc----EEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEE
Q 019139 246 PKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK 318 (345)
Q Consensus 246 ~~~~~-~~~~~~~~~~~~g-g~d----~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~ 318 (345)
+.+.+ .++.+.+.+++++ ++| ++||++|+..++..++++++++ |+++.+|.... ..++++..++. ++++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEE
Confidence 76522 2566777778876 776 8999999988888999999998 99999998643 35667777776 89999
Q ss_pred EeeecCCcccccHHHHHHHHhcccc
Q 019139 319 GTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
|++.++ ..+++++++++++|++
T Consensus 294 g~~~~~---~~~~~~~~~~i~~g~i 315 (349)
T TIGR03201 294 GNWGCP---PDRYPAALDLVLDGKI 315 (349)
T ss_pred EEecCC---HHHHHHHHHHHHcCCC
Confidence 987543 3678999999999875
No 25
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4.2e-43 Score=333.37 Aligned_cols=331 Identities=58% Similarity=1.012 Sum_probs=286.8
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
+||+++.+.++++++++.|.|++.++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 47889998887799999999999999999999999999999999888654 34678999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|+..+..+|+.|.+|+.++++.|+....+...|.. .+|...+.-+|.+.+|+++.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999988899999999999999999887765445544 5566666667777777777889999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
++++.+.+++.+||+++.+...++++++|+|+|+|++|++++|+|+.+|+..|+++++++++.+.++++|++++++..+.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999998888899999999999889999999999999999668888889999999999999999887763
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhc-cCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCccc
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 328 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 328 (345)
+.++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|++++++...
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 317 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK 317 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence 2266777777775699999999998777999999999 97 999999975323467788877734889999988877777
Q ss_pred ccHHHHHHHHhcccc
Q 019139 329 SQVPWLVDKYMKKVN 343 (345)
Q Consensus 329 ~~~~~~~~~~~~g~~ 343 (345)
+.+.++++++++++.
T Consensus 318 ~~~~~~~~l~~~~~l 332 (365)
T cd05279 318 DSVPKLVALYRQKKF 332 (365)
T ss_pred hHHHHHHHHHHcCCc
Confidence 888999998887753
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.3e-43 Score=330.43 Aligned_cols=292 Identities=22% Similarity=0.291 Sum_probs=247.1
Q ss_pred eeeeccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 12 AAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 12 a~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
|+.+.+++. .++++++|.|+|+++||+|||.++|||++|++.+.|.++....|.++|||++|+|+++|++++++++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 345555553 4889999999999999999999999999999999887654445789999999999999999999999
Q ss_pred CCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 88 GDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 88 Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
||+|++.+. ..|+.|.+|++++++.|+.... .|.. .+ |+|+||+.+|.+.++++|++
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~ 138 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWD-TD------------------GGYAEYTTVPAAFAYRLPTG 138 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcc-cC------------------CcceeEEEeccccEEECCCC
Confidence 999987654 5799999999999999987643 2322 23 49999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
+++++++.+++++.|||+++ ...++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++++.
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~ 216 (329)
T TIGR02822 139 YDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGA 216 (329)
T ss_pred CCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccc
Confidence 99999999999999999988 46789999999999999999999999999999 79999999999999999999998875
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 325 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 325 (345)
.+. . .+++|+++++.+...++..++++++++ |+++.+|.... ....+++..++. ++++.|+....
T Consensus 217 ~~~--~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~- 282 (329)
T TIGR02822 217 YDT--P---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLT-DTPPLNYQRHLFYERQIRSVTSNT- 282 (329)
T ss_pred ccc--C---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCc-cCCCCCHHHHhhCCcEEEEeecCC-
Confidence 431 1 126899999888778899999999997 99999997432 233566666665 99999987542
Q ss_pred cccccHHHHHHHHhcccc
Q 019139 326 KSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~ 343 (345)
+.++.++++++++|++
T Consensus 283 --~~~~~~~~~l~~~g~i 298 (329)
T TIGR02822 283 --RADAREFLELAAQHGV 298 (329)
T ss_pred --HHHHHHHHHHHHhCCC
Confidence 3678888999988864
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=7.2e-43 Score=329.49 Aligned_cols=302 Identities=23% Similarity=0.328 Sum_probs=249.8
Q ss_pred eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|||+++++++. ++++++|.|+| .++||+|||.++++|++|...+.+.. ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 78999998876 99999999997 59999999999999999987532211 11357899999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|++.+..+|+.|.+|+.+.++.|.+... .|.. .+ |+|+||+.+|.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSR-RD------------------GGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccC-CC------------------CccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999986432 2221 22 4999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
+++++.+. +++++++++ +...++++++|+|+|+|++|++++|+|+.+|++.|+++++++++++.++++|++.++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998774 556678874 6678899999999999999999999999999955889999999999999999999998765
Q ss_pred CCccHHHHHHhhcCC-Ccc-EEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh---hhhcc-ccEEEEeee
Q 019139 249 HDKPIQQVLVDLTDG-GVD-YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP---FQLVT-GRVWKGTAF 322 (345)
Q Consensus 249 ~~~~~~~~~~~~~~g-g~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~---~~~~~-~~~i~g~~~ 322 (345)
.+ .+.+.+++.+ ++| ++|||+|...++..++++++++ |+++.+|.... ..++++ ..++. +++|.|++.
T Consensus 215 --~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~~i~g~~~ 288 (347)
T PRK10309 215 --MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHH--DLHLTSATFGKILRKELTVIGSWM 288 (347)
T ss_pred --cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CcccChhhhhHHhhcCcEEEEEec
Confidence 23 3456666665 888 9999999988899999999997 99999998643 233332 24555 999999987
Q ss_pred cCCc--ccccHHHHHHHHhcccc
Q 019139 323 GGFK--SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 323 ~~~~--~~~~~~~~~~~~~~g~~ 343 (345)
+... ..+++.++++++++|+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~g~i 311 (347)
T PRK10309 289 NYSSPWPGQEWETASRLLTERKL 311 (347)
T ss_pred cccCCcchhHHHHHHHHHHcCCC
Confidence 5322 23678899999998864
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.2e-42 Score=326.66 Aligned_cols=302 Identities=30% Similarity=0.476 Sum_probs=260.4
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CC--------CCCCcccCcceeEEEEEe
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PE--------GLFPCILGHEAAGIVESV 78 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~--------~~~p~~~G~e~~G~Vv~~ 78 (345)
|||+++.++++ ++++++|.|+|.++||+||+.++++|++|++.+.+.. +. ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999998776 9999999999999999999999999999987665321 10 136889999999999999
Q ss_pred CCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (345)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 158 (345)
|++++.+++||+|+..+...|+.|.+|+.+.++.|.+... .|+...+ |+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG------------------GGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC------------------CceeeEEEechH
Confidence 9999999999999999889999999999999999985432 1111012 499999999999
Q ss_pred eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (345)
Q Consensus 159 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~ 238 (345)
.++++|+++++++++.+ .++.+||+++ ...+++++++|+|+|+|++|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998776 5788999988 778899999999999999999999999999997789999999999999999
Q ss_pred CCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139 239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV 316 (345)
Q Consensus 239 g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~ 316 (345)
|++.++++++ .++.+.+.+.+++ ++|++||++|+..++..++++++++ |+++.+|... ...++++..++. +++
T Consensus 217 ga~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~ 291 (351)
T cd08233 217 GATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKT 291 (351)
T ss_pred CCCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcE
Confidence 9999999876 5677888888877 7999999999877799999999997 9999999864 356778877777 999
Q ss_pred EEEeeecCCcccccHHHHHHHHhcccc
Q 019139 317 WKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 317 i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
|.|++.+. .+++.++++++++|++
T Consensus 292 i~g~~~~~---~~~~~~~~~~~~~g~l 315 (351)
T cd08233 292 LTGSICYT---REDFEEVIDLLASGKI 315 (351)
T ss_pred EEEEeccC---cchHHHHHHHHHcCCC
Confidence 99997553 3789999999998864
No 29
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.2e-41 Score=323.42 Aligned_cols=330 Identities=38% Similarity=0.683 Sum_probs=269.4
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
|+|||+++.+++.++++++.+.|++.++||+||+.++++|++|++...|.++ ..+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4799999999877799999999999999999999999999999999988765 346889999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccc-cCCCcc-ccccCcceeeeeEEeecceEEEcCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPI-YHFMGTSTFSQYTVVHDVSVAKIDP 165 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~-~~~~~~-~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (345)
||+|++.+. .|+.|.+|+.++.++|.+.......|.. .+|-.-+. .++.+. .++.+.|+|++|++++.+.++++|+
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999998764 8999999999999999865532222221 11100000 000010 0133457999999999999999999
Q ss_pred CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
++++.+++.+++++.+|+.++.....++++++|+|+|+|++|++++|+|+++|++.++++++++++.++++++|++.+++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99999999999999999998888888999999999988999999999999999977999999999999999999999988
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG 324 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 324 (345)
+.+ .++.+.+.++++.++|+++|++|+...+..++++++++ |+++.+|.........+++..++. ++++.++..+.
T Consensus 238 ~~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 238 PKE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred CCC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 766 46667777777449999999999877799999999998 999999975333345677777645 99999887654
Q ss_pred CcccccHHHHHHHHhcccc
Q 019139 325 FKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~~ 343 (345)
....+.+.+++++++++++
T Consensus 315 ~~~~~~~~~~~~~l~~g~l 333 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKF 333 (365)
T ss_pred cChHHHHHHHHHHHHcCCC
Confidence 4334566788888887753
No 30
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.1e-41 Score=323.06 Aligned_cols=312 Identities=28% Similarity=0.425 Sum_probs=261.7
Q ss_pred eeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC------
Q 019139 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE------ 84 (345)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~------ 84 (345)
||+++.++++.+++++++.|+|+++||+|||.++++|++|+....|.++...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999998877999999999999999999999999999999999887653457889999999999999999986
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc-eEEEc
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SVAKI 163 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~i 163 (345)
|++||+|+..+..+|+.|.+|+.+.++.|...... |.....+ . ....|+|+||+.++.+ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~-------~-----~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCD-------D-----PHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---ccccccc-------C-----CCCCcccceEEEecCCCceEEC
Confidence 99999999999999999999999999999876532 2211100 0 0012599999999986 79999
Q ss_pred CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (345)
Q Consensus 164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~ 243 (345)
|++++..+++.+++++.|||+++......+++++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.+
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999999889999999998776666799999999989999999999999999779999999999999999999998
Q ss_pred eCCCCCC-ccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139 244 VNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT 320 (345)
Q Consensus 244 i~~~~~~-~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 320 (345)
+++++.. .++...+.+.+++ ++|++||++|+...+..++++++++ |+++.+|........++++..++. ++++.++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence 8876521 1233467777776 8999999999877789999999997 999999975433455677666666 9999999
Q ss_pred eecCCcccccHHHHHHHHhcc
Q 019139 321 AFGGFKSRSQVPWLVDKYMKK 341 (345)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~g 341 (345)
+.++. +++.++++++.++
T Consensus 306 ~~~~~---~~~~~~~~~~~~~ 323 (361)
T cd08231 306 HNYDP---SHLYRAVRFLERT 323 (361)
T ss_pred ccCCc---hhHHHHHHHHHhc
Confidence 76533 5678888888776
No 31
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.8e-41 Score=316.95 Aligned_cols=308 Identities=25% Similarity=0.343 Sum_probs=258.8
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++. +++++++.|.+.++||+|||.++++|++|++.+.+.++....|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 78999999886 89999999999999999999999999999998887765556689999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCCC
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l 167 (345)
+|+..+..+|+.|.+|..++.+.|.+.......+.. . .|+|+||+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~-~------------------~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNF-K------------------DGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCC-C------------------CcceeEEEEcchhhCceEECCCCC
Confidence 999988789999999999999999875321111110 1 2499999999974 899999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
++.+++.++.++.|||+++ ....++++++|+|+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++.
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 9999999988999999985 778899999999998899999999999999996789999999999999999999999887
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhh--hcc-ccEEEEeeec
Q 019139 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ--LVT-GRVWKGTAFG 323 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~--~~~-~~~i~g~~~~ 323 (345)
+ .++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|.......++++... ... .+++.+....
T Consensus 220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 296 (351)
T cd08285 220 N--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP 296 (351)
T ss_pred C--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC
Confidence 6 4667777777766 8999999999877789999999997 999999986543344555322 223 6677765432
Q ss_pred CCcccccHHHHHHHHhcccc
Q 019139 324 GFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~~ 343 (345)
. ..++++++++++++|++
T Consensus 297 ~--~~~~~~~~~~~~~~g~i 314 (351)
T cd08285 297 G--GRLRMERLASLIEYGRV 314 (351)
T ss_pred C--ccccHHHHHHHHHcCCC
Confidence 1 23678999999998874
No 32
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.1e-41 Score=320.56 Aligned_cols=284 Identities=17% Similarity=0.230 Sum_probs=229.4
Q ss_pred eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC----CCCCcccCcceeEEEEEeCCCCCC
Q 019139 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
.-+++++.++++ ++++++|.|. +++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|.+ .
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 467899999986 9999999995 9999999999999999999999987532 257999999999999998764 7
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
|++||||++.+...|+ |.+|. ..+.|.+... .|.. .+| +|+||+++|++.++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEII--PENYLPSSRF---RSSG-YDG------------------FMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hcccc--hhccCCCcce---eEec-CCC------------------ceEEEEEEchHHeEECC
Confidence 9999999998887777 44563 5677876532 1221 233 99999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHh--hcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCc
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVT 241 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~~~~g~~ 241 (345)
+++++++||.+. +++++|+++.. ...+++|++|+|+|+|++|++++|+|+. +|..+|++++++++|++++++++++
T Consensus 133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 999998877554 88899998754 3456889999999999999999999996 6655899999999999999886654
Q ss_pred eEeCCCCCCccHHHHHHhhcCC-CccEEEEccC---CHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV 316 (345)
Q Consensus 242 ~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~ 316 (345)
..++ + .... ++|++||++| .+.++..++++++++ |+++++|... .+.++++..++. +++
T Consensus 212 ~~~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~ 275 (341)
T cd08237 212 YLID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKGLT 275 (341)
T ss_pred eehh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCceE
Confidence 3221 1 1112 6999999999 456789999999997 9999999753 346677777776 999
Q ss_pred EEEeeecCCcccccHHHHHHHHhcc
Q 019139 317 WKGTAFGGFKSRSQVPWLVDKYMKK 341 (345)
Q Consensus 317 i~g~~~~~~~~~~~~~~~~~~~~~g 341 (345)
|.|+..++ .++++++++++++|
T Consensus 276 i~g~~~~~---~~~~~~~~~~~~~~ 297 (341)
T cd08237 276 LVGSSRST---REDFERAVELLSRN 297 (341)
T ss_pred EEEecccC---HHHHHHHHHHHHhC
Confidence 99987543 36789999999987
No 33
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.5e-42 Score=294.82 Aligned_cols=283 Identities=26% Similarity=0.296 Sum_probs=241.1
Q ss_pred CcceeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139 5 GQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (345)
Q Consensus 5 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v 82 (345)
++|+..|-+++++-|.. +++++.|.|+|.|||++||..|+|+|+.|.++++|.+.+.+.|++||.|++|+|+++|++|
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 46777899999988765 8899999999999999999999999999999999999877899999999999999999999
Q ss_pred CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (345)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 162 (345)
+++++||||...- . .|.|+|++.+|...+++
T Consensus 84 tdrkvGDrVayl~-------------------------------~------------------~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN-------------------------------P------------------FGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec-------------------------------c------------------chhhheeccccceeecc
Confidence 9999999997321 1 14999999999999999
Q ss_pred cCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (345)
Q Consensus 163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 241 (345)
+|+.+++.+||++.+.++|||.-+.+...+++|++|||+.+ |++|++++|++++.|+ .+|++.++.+|++.+++.|++
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999998888999999999999976 9999999999999999 899999999999999999999
Q ss_pred eEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE-E
Q 019139 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW-K 318 (345)
Q Consensus 242 ~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i-~ 318 (345)
+.|+++. +|+.+.+.++++| |+|+++|.+|... +...+.+|++. |.+|.+|..+ +..-++++..|-- .+++ +
T Consensus 194 h~I~y~~--eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lvr 268 (336)
T KOG1197|consen 194 HPIDYST--EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLVR 268 (336)
T ss_pred ceeeccc--hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhcc
Confidence 9999998 8899999999999 9999999999955 99999999998 9999999843 3333444443322 4433 2
Q ss_pred EeeecCCcccccH----HHHHHHHhccc
Q 019139 319 GTAFGGFKSRSQV----PWLVDKYMKKV 342 (345)
Q Consensus 319 g~~~~~~~~~~~~----~~~~~~~~~g~ 342 (345)
.+.++-...+.++ .+++..+.+|+
T Consensus 269 psl~gYi~g~~el~~~v~rl~alvnsg~ 296 (336)
T KOG1197|consen 269 PSLLGYIDGEVELVSYVARLFALVNSGH 296 (336)
T ss_pred HhhhcccCCHHHHHHHHHHHHHHhhcCc
Confidence 3333333333333 44455555554
No 34
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.2e-40 Score=312.62 Aligned_cols=299 Identities=26% Similarity=0.446 Sum_probs=256.9
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++++++++++|.|++.++||+||+.++++|++|+..+.|..+....|.++|||++|+|+++|++++++++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999976799999999999999999999999999999999888765445688999999999999999999999999
Q ss_pred EEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 90 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
+|++.+ ...|+.|.+|..++++.|.+... .|+. .+ |+|++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVT-RD------------------GGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcc-cC------------------CcceeEEEEchhheEeCCCCCC
Confidence 998754 47899999999999999997653 2322 22 3999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
+.+++.+++++.+||+++.. ..+.++++|+|+|+|++|++++|+|+++|+ +|+++++++++.+.++++|++.++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998844 489999999999999999999999999999 7999999999999999999999988765
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS 327 (345)
Q Consensus 249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~ 327 (345)
.++.+.+.+. +++|+++|++|....+...+++++++ |+++.+|... ..+++++..++. +++|.|+..+.
T Consensus 217 --~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 217 --EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred --ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---
Confidence 4566666655 37999999998667799999999997 9999999854 356677766666 99999987443
Q ss_pred cccHHHHHHHHhccc
Q 019139 328 RSQVPWLVDKYMKKV 342 (345)
Q Consensus 328 ~~~~~~~~~~~~~g~ 342 (345)
..++.++++++++++
T Consensus 287 ~~~~~~~~~~~~~~~ 301 (333)
T cd08296 287 ALDSEDTLKFSALHG 301 (333)
T ss_pred HHHHHHHHHHHHhCC
Confidence 356777777776654
No 35
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=5.6e-40 Score=311.66 Aligned_cols=328 Identities=44% Similarity=0.779 Sum_probs=270.2
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++.+++++++|.|++.++||+||+.++++|+.|...+.|.++ ..+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 79999999888899999999999999999999999999999999888765 34678999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|+..+..+|++|.+|++++.+.|...... -+|.. .++.+++.-.|......++.|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccc-ccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999999999999999999999999765321 00000 0000000000111111123469999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
++++.+++++.+||.++....++.++++|+|+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999999888889999999999988999999999999999955999999999999999999988888765
Q ss_pred CccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS 327 (345)
Q Consensus 250 ~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~ 327 (345)
.++.+.+.++..+ ++|++||++++...+...+++++++ |+++.+|.........++...+.. +.++.++.++....
T Consensus 237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (363)
T cd08279 237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP 314 (363)
T ss_pred -ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence 4567777777755 8999999999767789999999997 999999875433456778777776 88889987765555
Q ss_pred cccHHHHHHHHhcccc
Q 019139 328 RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 328 ~~~~~~~~~~~~~g~~ 343 (345)
.+.+.++++++++++.
T Consensus 315 ~~~~~~~~~l~~~g~l 330 (363)
T cd08279 315 RRDIPRLLDLYRAGRL 330 (363)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 6788999999988753
No 36
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.5e-39 Score=305.69 Aligned_cols=298 Identities=23% Similarity=0.391 Sum_probs=249.6
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++. ++++++|.|+|.++||+||+.++++|++|++.+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999998875 99999999999999999999999999999999888766556789999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|+..+...|+.|.+|..++++.|.+... .++. .+ |+|+||+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVH-RD------------------GGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEc-cC------------------CcceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999975432 1211 12 49999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
.+++ +..++.++++ +.+..+++++++|+|+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4567788885 5577889999999999999999999999996 69967888999999999999999999998865
Q ss_pred CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 326 (345)
Q Consensus 249 ~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~ 326 (345)
.++.+.+.. .+ ++|++||++|++.++..++++++++ |+++.+|.... ...++...+.. ++++.++..
T Consensus 216 --~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---- 284 (339)
T PRK10083 216 --EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL---- 284 (339)
T ss_pred --ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----
Confidence 445555533 23 5789999999877799999999997 99999997532 33445545445 888887753
Q ss_pred ccccHHHHHHHHhcccc
Q 019139 327 SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 327 ~~~~~~~~~~~~~~g~~ 343 (345)
..+++.++++++++|+.
T Consensus 285 ~~~~~~~~~~~~~~g~l 301 (339)
T PRK10083 285 NANKFPVVIDWLSKGLI 301 (339)
T ss_pred ChhhHHHHHHHHHcCCC
Confidence 23568888888887753
No 37
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2e-39 Score=304.77 Aligned_cols=301 Identities=29% Similarity=0.436 Sum_probs=259.9
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++.+++.++++.+.+.|++.+++|+||+.++++|++|+....|.++ ...+|.++|+|++|+|+++|++++.++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999998877799999999999999999999999999999998888764 235688999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+..+...|+.|.+|+.+.+++|...... |+. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GIG-TD------------------GGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Ccc-CC------------------CcceeeEEecHHHeEECCCC
Confidence 999999998889999999999999999987752 322 23 49999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
+++++++.+++++.|||+++... ..+.++++|+|+|+|++|++++|+|+.+| . +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999998665 46888999999999889999999999999 6 899998999999999999999998
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF 322 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 322 (345)
++++ . +.+.+.++.++ ++|+++|++|+...+..++++++++ |+++.+|.... ..++...++. ++++.++..
T Consensus 218 ~~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~ 290 (340)
T cd05284 218 NASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLW 290 (340)
T ss_pred cCCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEec
Confidence 8876 3 67778887776 8999999999867799999999997 99999997532 3455555345 999998865
Q ss_pred cCCcccccHHHHHHHHhcccc
Q 019139 323 GGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~g~~ 343 (345)
. ..+.+.++++++++|++
T Consensus 291 ~---~~~~~~~~~~~l~~g~l 308 (340)
T cd05284 291 G---TRAELVEVVALAESGKV 308 (340)
T ss_pred c---cHHHHHHHHHHHHhCCC
Confidence 4 33678888888887753
No 38
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=3e-39 Score=304.37 Aligned_cols=307 Identities=30% Similarity=0.449 Sum_probs=257.0
Q ss_pred eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|||+++.+++. +++.+.|.|.| .++||+||+.++++|++|...+.|.++..++|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999998876 89999999999 99999999999999999999998887666778999999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (345)
|+|+..+..+|+.|.+|.++..+.|.........| ....|+|++|++++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-------------------cCCCCeeeEEEEecchhCeEEECCCC
Confidence 99999999999999999999999998755322111 1123599999999987 99999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
+++.+++.+++++.|||+++ ...+++++++|+|.|+|++|++++|+|+.+|...++++++++++.++++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999987 67889999999998889999999999999996578888888899999999999999988
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCC
Q 019139 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 325 (345)
++ .++.+.+.+++++ ++|++||++|+...+..++++|+++ |+++.+|..............+..++++.++....
T Consensus 220 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (347)
T cd05278 220 KN--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV- 295 (347)
T ss_pred Cc--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-
Confidence 76 4577777777775 8999999999866689999999997 99999996543221112222122388888875432
Q ss_pred cccccHHHHHHHHhcccc
Q 019139 326 KSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~ 343 (345)
.+.+.+++++++++++
T Consensus 296 --~~~~~~~~~~~~~~~l 311 (347)
T cd05278 296 --RARMPELLDLIEEGKI 311 (347)
T ss_pred --hhHHHHHHHHHHcCCC
Confidence 4678888888887753
No 39
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=8.5e-39 Score=302.02 Aligned_cols=302 Identities=25% Similarity=0.386 Sum_probs=251.9
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC--------C-CCCCcccCcceeEEEEEeCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------E-GLFPCILGHEAAGIVESVGE 80 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--------~-~~~p~~~G~e~~G~Vv~~G~ 80 (345)
|||+++++++. +++++++.|++.+++|+||+.++++|+.|++.+.|... + .+.|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999998876 99999999999999999999999999999998887531 1 14678999999999999999
Q ss_pred CCC--CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139 81 GVT--EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (345)
Q Consensus 81 ~v~--~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 158 (345)
+++ .|++||+|+..+...|+.|.+|..++++.|.... ..|+.. ...|+|++|+.++.+
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeecc-----------------CCCCcceeeEEcccc
Confidence 998 8999999999999999999999999999997532 233310 012499999999988
Q ss_pred -eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139 159 -SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (345)
Q Consensus 159 -~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~ 237 (345)
.++++|+++++.+++.+ .++.++|+++ +..+++++++|+|.|+|++|++++|+|+++|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999988 7899999987 77889999999997779999999999999998678889999999999999
Q ss_pred cCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc-c-c
Q 019139 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-T-G 314 (345)
Q Consensus 238 ~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~-~ 314 (345)
+|++.+++..+ .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|..... ..++...+. . +
T Consensus 218 ~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~ 292 (350)
T cd08256 218 FGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGDRKE 292 (350)
T ss_pred cCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhcccc
Confidence 99988888765 5677778888777 8999999999766689999999997 999999975432 334444332 3 7
Q ss_pred cEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139 315 RVWKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 315 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
+++.|+.... ..+.++++++++|+.
T Consensus 293 ~~i~~~~~~~----~~~~~~~~~~~~g~l 317 (350)
T cd08256 293 LDVLGSHLGP----YCYPIAIDLIASGRL 317 (350)
T ss_pred cEEEEeccCc----hhHHHHHHHHHcCCC
Confidence 8888876442 356777787777643
No 40
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=3.8e-39 Score=310.61 Aligned_cols=297 Identities=19% Similarity=0.267 Sum_probs=236.8
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccc-cCCCC----C--CCCCcccCcceeEEEEEeCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDP----E--GLFPCILGHEAAGIVESVGE 80 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~----~--~~~p~~~G~e~~G~Vv~~G~ 80 (345)
|+|||+++.++++ ++++++|.|+|+++||+|||.++|||++|++.+ .|... . ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5699999999986 999999999999999999999999999999976 45421 1 14788999999999999999
Q ss_pred CCC-CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc-
Q 019139 81 GVT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV- 158 (345)
Q Consensus 81 ~v~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 158 (345)
+++ .|++||||++.+...|+.|.+|. + .|.. .+| +|+||+++|.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~-------------~g~~-~~G------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G-------------YSYT-YPG------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C-------------cccc-CCC------------------cceEEEEecHHh
Confidence 998 69999999998888898888772 1 1111 233 99999999987
Q ss_pred ---eEEEcCCCCChhhhccc-ccch-hhhhHHH--------HhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeE
Q 019139 159 ---SVAKIDPQAPLDKVCLL-GCGV-PTGLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRV 222 (345)
Q Consensus 159 ---~~~~iP~~l~~~~aa~~-~~~~-~ta~~al--------~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G--~~~v 222 (345)
.++++|+++++++++.+ +.+. .+++.++ .+..++++|++|+|+|+ |++|++++|+|+++| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 58999999999998865 2111 1233332 24567899999999985 999999999999975 4579
Q ss_pred EEEcCChhHHHHHHhc--------CCc-eEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEE
Q 019139 223 IGIDIDPKKFDRAKNF--------GVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTS 292 (345)
Q Consensus 223 i~~~~~~~~~~~~~~~--------g~~-~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~ 292 (345)
++++.+++|++.++++ |++ .++++.+ ..++.+.+.+++++ ++|++||++|.+.++..++++++++ |++
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 9999999999999997 666 4566543 13577778888877 8999999999888899999999997 888
Q ss_pred EEeccCC-CCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139 293 VIVGVAA-SGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 293 v~~G~~~-~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
+.++... .....++++..++. +++|.|+..+. ..+++++++++++|++
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i 334 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKL 334 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCC
Confidence 7765422 22235677777777 99999987543 3689999999999875
No 41
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=9.2e-39 Score=301.08 Aligned_cols=306 Identities=28% Similarity=0.471 Sum_probs=261.6
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++.++++++.|.|.+.++||+||+.++++|+.|+..+.|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999998888899999999999999999999999999999999988776556788999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCCC
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l 167 (345)
+|+..+...|++|.+|..+..+.|..+.. .|+. .+ |+|++|++++.+ .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFT-HP------------------GSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccC-CC------------------CcceeEEEcccccCceEECCCCC
Confidence 99887778899999999999999998642 2222 12 499999999974 899999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
++++++.++.++.+||+++.+..++.++++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+.++++|++.+++.+
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999998778889999999999999999999999999999 899999999999999999999998876
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCc-eecChhhhcc-ccEEEEeeecCC
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQLVT-GRVWKGTAFGGF 325 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~-~~~~~~~~~~-~~~i~g~~~~~~ 325 (345)
+ +.++.+.+.++..+++|++||++|+...+...+++++++ |+++.+|....... ..+++..++. ++++.++...
T Consensus 218 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (345)
T cd08260 218 E-VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-- 293 (345)
T ss_pred c-chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence 4 235666677766568999999999766789999999997 99999997543222 4566665645 8999988653
Q ss_pred cccccHHHHHHHHhcccc
Q 019139 326 KSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~ 343 (345)
..+.+.++++++++++.
T Consensus 294 -~~~~~~~~~~l~~~~~i 310 (345)
T cd08260 294 -PAHRYDAMLALIASGKL 310 (345)
T ss_pred -CHHHHHHHHHHHHcCCC
Confidence 23677888888877753
No 42
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.3e-38 Score=304.62 Aligned_cols=322 Identities=28% Similarity=0.371 Sum_probs=257.4
Q ss_pred eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|||+++.++++ ++++++|.|+| .+++|+||+.++++|++|+..+.|.++..++|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999988755 99999999998 49999999999999999999999987665678999999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCC-CCceecCCcccccccCCC-ccccccCcceeeeeEEeecc--eEEEcC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGAT-GAGVMMNDRKSRFSINGK-PIYHFMGTSTFSQYTVVHDV--SVAKID 164 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~-~~g~~~~~g~~~~~~~~~-~~~~~~~~g~~a~~~~v~~~--~~~~iP 164 (345)
|+|+..+...|+.|.+|+.+.++.|.+..... ..++. |.......+- .+. ....|+|++|++++.+ .++++|
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lp 155 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLY---GHAGAGIFGYSHLT-GGYAGGQAEYVRVPFADVGPFKIP 155 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccccccc---cccccccccccccc-CCCCCeeEEEEEcccccCeEEECC
Confidence 99999888889999999999999998654321 00000 0000000000 000 0113699999999987 899999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
+++++++|++++.++++||+++ +..++.++++|+|+|+|++|++++++|++.|+.+|+++++++++.+.+++++...++
T Consensus 156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi 234 (386)
T cd08283 156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI 234 (386)
T ss_pred CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence 9999999999999999999998 788899999999998899999999999999985699999999999999998444677
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCC---------------------HHHHHHHHHHhccCCeEEEEeccCCCCC
Q 019139 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGN---------------------VSVMRAALECCHKGWGTSVIVGVAASGQ 302 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~---------------------~~~~~~~~~~l~~~~G~~v~~G~~~~~~ 302 (345)
++.+. .++.+.+.+++.+ ++|++||++|+ ...+..++++++++ |+++.+|.....
T Consensus 235 ~~~~~-~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~- 311 (386)
T cd08283 235 NFEEV-DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT- 311 (386)
T ss_pred cCCcc-hHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-
Confidence 76551 1477788888777 89999999975 24688899999998 999999975432
Q ss_pred ceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139 303 EISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 303 ~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
...+++..++. ++++.++... ..+.+.++++++++++.
T Consensus 312 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l 350 (386)
T cd08283 312 VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGEL 350 (386)
T ss_pred cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCC
Confidence 34556544455 8999887532 34678888888887753
No 43
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.5e-38 Score=300.19 Aligned_cols=304 Identities=28% Similarity=0.421 Sum_probs=257.3
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC------------CCCCcccCcceeEEEEE
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE------------GLFPCILGHEAAGIVES 77 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~------------~~~p~~~G~e~~G~Vv~ 77 (345)
|||+++..++.+++++++|.|++.++||+||+.++++|++|+..+.|.++. ..+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 789999988888999999999999999999999999999999988776531 24567899999999999
Q ss_pred eCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (345)
Q Consensus 78 ~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 157 (345)
+|++++.+++||+|+..+...|+.|.+|.++.++.|..... .|.. +.|+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIF-------------------QDGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeee-------------------ccCcceeeEEecH
Confidence 99999999999999999999999999999999999976532 1211 2249999999999
Q ss_pred ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (345)
Q Consensus 158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~ 237 (345)
+.++++|+++++.+++.+.+++.+||+++.......++++|+|+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999998777777789999999889999999999999999778899999999999999
Q ss_pred cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc-cccE
Q 019139 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV 316 (345)
Q Consensus 238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~ 316 (345)
+|++.+++.++ ..+.+.+.++.++++|++||++|+...+..++++|+++ |+++.+|.........++ .+. ++++
T Consensus 219 ~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~--~~~~~~~~ 293 (350)
T cd08240 219 AGADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLP--LLPLRALT 293 (350)
T ss_pred hCCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHH--HHhhcCcE
Confidence 99988887765 45566677766668999999999777799999999997 999999975433233333 233 4889
Q ss_pred EEEeeecCCcccccHHHHHHHHhcccc
Q 019139 317 WKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 317 i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
+.++..... +++.+++++++++..
T Consensus 294 i~~~~~~~~---~~~~~~~~ll~~~~i 317 (350)
T cd08240 294 IQGSYVGSL---EELRELVALAKAGKL 317 (350)
T ss_pred EEEcccCCH---HHHHHHHHHHHcCCC
Confidence 998876543 678888888887753
No 44
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.5e-38 Score=293.56 Aligned_cols=300 Identities=28% Similarity=0.462 Sum_probs=255.0
Q ss_pred eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
||++++.+++ +.+++++++.|++.++||+||+.++++|++|.+...|.+.....|.++|+|++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5788888755 359999999999999999999999999999999888876444567899999999999999999999999
Q ss_pred CEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 89 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
|+|+..+. ..|+.|.+|..+..+.|+.... .|.. . .|+|++|++++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQ-A------------------DGGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeec-C------------------CCceEEEEEcchHHeEECcCCC
Confidence 99998774 7899999999999999987432 2211 2 2499999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE--cCChhHHHHHHhcCCceEeC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~--~~~~~~~~~~~~~g~~~~i~ 245 (345)
++.+++ +..++.+||+++....+++++++|+|.|+|.+|++++|+|+++|+ +|+++ ++++++.++++++|++.+ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 666888999998888899999999998889999999999999999 67765 345567888899999877 6
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
+.. .++.+.+.+...+ ++|++||++|+...+...++.|+++ |+++.+|..+ +....++...++. +++|.|++++
T Consensus 216 ~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 216 GGE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecC
Confidence 654 5677778777766 8999999998767789999999997 9999999864 3456777777776 9999999987
Q ss_pred CCcccccHHHHHHHHhcc
Q 019139 324 GFKSRSQVPWLVDKYMKK 341 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g 341 (345)
+. +++.++++++++|
T Consensus 292 ~~---~~~~~~~~~~~~~ 306 (306)
T cd08258 292 TP---ASWETALRLLASG 306 (306)
T ss_pred ch---HhHHHHHHHHhcC
Confidence 54 7899999999875
No 45
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.7e-38 Score=304.68 Aligned_cols=309 Identities=21% Similarity=0.256 Sum_probs=253.8
Q ss_pred cceeeeeeeecc--CC---CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC----------CCCCCcccCcc
Q 019139 6 QVITCKAAVAWE--PN---KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFPCILGHE 70 (345)
Q Consensus 6 ~~~~~~a~~~~~--~~---~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e 70 (345)
.|.+|+|+++.. ++ +.++++++|.|.++++||+||+.+++||++|++...|... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 567899999863 22 2378899999999999999999999999999988776511 01123589999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceee
Q 019139 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (345)
Q Consensus 71 ~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 150 (345)
++|+|+++|++++.+++||+|++.+...|+.|.+|..+.+++|..... .|.... .|+|+
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~------------------~g~~a 147 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN------------------YGSFA 147 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCC------------------CCcce
Confidence 999999999999999999999999888999999999999999986543 222112 24999
Q ss_pred eeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhh--cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 019139 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (345)
Q Consensus 151 ~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~--~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~ 227 (345)
+|++++...++++|+++++.+++.+++++.|||+++... .+++++++|+|+|+ |++|++++++|+++|+ +++++++
T Consensus 148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~ 226 (393)
T cd08246 148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS 226 (393)
T ss_pred eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence 999999999999999999999999999999999988654 67899999999998 9999999999999999 7888889
Q ss_pred ChhHHHHHHhcCCceEeCCCCCC--------------------ccHHHHHHhhcCC--CccEEEEccCCHHHHHHHHHHh
Q 019139 228 DPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECC 285 (345)
Q Consensus 228 ~~~~~~~~~~~g~~~~i~~~~~~--------------------~~~~~~~~~~~~g--g~d~v~d~~g~~~~~~~~~~~l 285 (345)
++++.+.++++|++.+++.++.+ ..+.+.+.+++++ ++|++||++|+ ..+...++++
T Consensus 227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l 305 (393)
T cd08246 227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVC 305 (393)
T ss_pred CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHh
Confidence 99999999999999998864421 1255677777776 69999999997 4589999999
Q ss_pred ccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139 286 HKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 286 ~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~ 342 (345)
+++ |+++.+|... .....++...++. ++++.|++.+.+ +++.+++++++++.
T Consensus 306 ~~~-G~~v~~g~~~-~~~~~~~~~~l~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~ 358 (393)
T cd08246 306 DRG-GMVVICAGTT-GYNHTYDNRYLWMRQKRIQGSHFAND---REAAEANRLVMKGR 358 (393)
T ss_pred ccC-CEEEEEcccC-CCCCCCcHHHHhhheeEEEecccCcH---HHHHHHHHHHHcCC
Confidence 997 9999999743 2234566666666 889999876543 56778888887764
No 46
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=5.7e-38 Score=298.33 Aligned_cols=327 Identities=32% Similarity=0.538 Sum_probs=264.0
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC---CC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE---VQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~---~~ 86 (345)
|||+++.+++.++++++.|.|.+.++||+||+.++++|++|+..+.+.++. .+|.++|||++|+|+.+|++++. |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999998777999999999999999999999999999999988887654 56789999999999999999988 99
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccC-CCccccccCcceeeeeEEeecceEEEcCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN-GKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (345)
+||+|+..+..+|+.|.+|..+.+++|.....+...+....+|...+... +.++. ....|+|++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEECCC
Confidence 99999998888999999999999999997653211110001110000000 00000 01236999999999999999999
Q ss_pred CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
++++.+++.+++++.|||+++.....+.++++|+|+|+|++|++++++|+.+|+..+++++.++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999877788899999999988999999999999999954898989999999999999999998
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
.++ .++.+.+.+..++ ++|++||++++...+..++++++++ |+++.+|.........++...++. ++++.++...
T Consensus 239 ~~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 239 AAK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred CCc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 876 4667777777766 8999999999874689999999997 999999875433344566666644 8888886422
Q ss_pred CCcccccHHHHHHHHhcccc
Q 019139 324 GFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~~ 343 (345)
...+.+.++++++++++.
T Consensus 316 --~~~~~~~~~~~ll~~~~l 333 (367)
T cd08263 316 --RPRQDLPELVGLAASGKL 333 (367)
T ss_pred --CcHHHHHHHHHHHHcCCC
Confidence 224678888888887753
No 47
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=5.6e-38 Score=295.73 Aligned_cols=302 Identities=28% Similarity=0.409 Sum_probs=257.6
Q ss_pred eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|||+++.+++. ++++++|.|+| .++||+||+.++++|+.|+..+.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999998886 99999999996 89999999999999999999998877655568899999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (345)
|+|++.+...|++|.+|..+..+.|....+. .|.. .+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNL-ID------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccc-cC------------------CeeeeEEEcccccCceEECCCC
Confidence 9999988889999999999999999865432 1211 22 499999999987 89999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
+++.+++.+++++.+||+++....++.++++|+|.|+|++|++++|+|+.+|..+|+++++++++.+.++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999987778889999999999889999999999999994488889899999999999999999988
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG 324 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 324 (345)
.+ .++.+.+.+++.+ ++|++||++|....+..+++.|+++ |+++.+|... ...++++..++. ++++.+..+.
T Consensus 219 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~- 292 (345)
T cd08286 219 AK--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG--KPVDLHLEKLWIKNITITTGLVD- 292 (345)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC--CCCCcCHHHHhhcCcEEEeecCc-
Confidence 75 4566777777766 8999999999877789999999998 9999999743 245667766555 9999876432
Q ss_pred CcccccHHHHHHHHhccc
Q 019139 325 FKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~ 342 (345)
.+.+.+++++++++.
T Consensus 293 ---~~~~~~~~~~~~~~~ 307 (345)
T cd08286 293 ---TNTTPMLLKLVSSGK 307 (345)
T ss_pred ---hhhHHHHHHHHHcCC
Confidence 245777788887765
No 48
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=8.4e-39 Score=293.13 Aligned_cols=252 Identities=27% Similarity=0.408 Sum_probs=211.1
Q ss_pred ccCcceeEEEEEeCCCCC------CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCc
Q 019139 66 ILGHEAAGIVESVGEGVT------EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139 (345)
Q Consensus 66 ~~G~e~~G~Vv~~G~~v~------~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~ 139 (345)
++|||++|+|+++|++|+ .+++||||++.+..+|+.|.+|+.++++.|.+.... |.....+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC----------
Confidence 589999999999999998 899999999999999999999999999999875532 2110000
Q ss_pred cccccCcceeeeeEEeecc-eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 019139 140 IYHFMGTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG 218 (345)
Q Consensus 140 ~~~~~~~g~~a~~~~v~~~-~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G 218 (345)
+....|+|+||+++|++ .++++|+++++++++.+++++.|+|+++ +.....++++|+|+|+|++|++++|+|+++|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00112499999999997 7999999999999999998999999987 4455569999999999999999999999999
Q ss_pred CCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 219 ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 219 ~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+++|++++++++|+++++++|++.+++..+ ..+.+.+++.+ ++|++||++|++.+++.++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 955999999999999999999998887653 24556666666 8999999999888899999999998 99999997
Q ss_pred CCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcc
Q 019139 298 AASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKK 341 (345)
Q Consensus 298 ~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g 341 (345)
.....++++++..++. +++|.|+..++ .++++++++++.++
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~ 261 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAAN 261 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhh
Confidence 5433456788888877 99999987543 36899999999875
No 49
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.5e-38 Score=295.36 Aligned_cols=269 Identities=22% Similarity=0.283 Sum_probs=214.1
Q ss_pred eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecC-ccccccccCCCCC---CCCCcccCcceeEEEEEeCCCCCC
Q 019139 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALC-HTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
+|||+++.+++. ++++++|.|+|+++||+||+.++||| ++|++.+.|.++. ..+|.++|||++|+|+++|+++ .
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998876 99999999999999999999999996 7999988887643 2579999999999999999998 5
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
|++||||+... ..|..|.. | .. |+|+||+.+|++.++++|
T Consensus 79 ~~vGdrV~~~~----~~c~~~~~---------------~---~~------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVPG----SNCYEDVR---------------G---LF------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEeC----cccccccc---------------c---cC------------------CcccceEEcCHHHceeCC
Confidence 99999998632 22322210 0 12 399999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
++++++. +.++ ++.|||+++.. . ..++++|+|+|+|++|++++|+|+++|++.|++++.++++++.++.+ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9999764 4444 57899998844 3 34688999999999999999999999996677788877777766543 344
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
++.+ . .+.++|++||++|++.+++.++++++++ |+++++|.... ..++++..++. ++++.|+...
T Consensus 192 ~~~~---~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~~ 257 (308)
T TIGR01202 192 DPEK---D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAEW 257 (308)
T ss_pred Chhh---c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEeccc
Confidence 4322 0 1238999999999987789999999997 99999998543 45666666666 8999988644
Q ss_pred CCcccccHHHHHHHHhcccc
Q 019139 324 GFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~~ 343 (345)
. .++++++++++++|++
T Consensus 258 ~---~~~~~~~~~l~~~g~i 274 (308)
T TIGR01202 258 Q---PGDLHAVRELIESGAL 274 (308)
T ss_pred c---hhHHHHHHHHHHcCCC
Confidence 2 3679999999998874
No 50
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=7.4e-38 Score=300.66 Aligned_cols=310 Identities=22% Similarity=0.299 Sum_probs=253.3
Q ss_pred Ccceeeeeeeecc--CCC---CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC----------CCCCC-cccC
Q 019139 5 GQVITCKAAVAWE--PNK---PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFP-CILG 68 (345)
Q Consensus 5 ~~~~~~~a~~~~~--~~~---~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G 68 (345)
..|.+|||+++.. ++. .+++.++|.|.|.++||+||+.++++|++|.+...+... ....| .++|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G 82 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG 82 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence 3456799999965 453 388999999999999999999999999999877655321 11223 3899
Q ss_pred cceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcce
Q 019139 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTST 148 (345)
Q Consensus 69 ~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (345)
||++|+|+++|++++.+++||+|++.....|++|.+|+.++++.|..... .|....+ |+
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~------------------g~ 141 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF------------------GS 141 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC------------------cc
Confidence 99999999999999999999999999999999999999999999976542 2211122 49
Q ss_pred eeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHh--hcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 019139 149 FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (345)
Q Consensus 149 ~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~ 225 (345)
|++|+.++.+.++++|+++++++++.+.+++.+||+++.. ..++.++++|+|+|+ |++|++++|+|+++|+ +++++
T Consensus 142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~ 220 (398)
T TIGR01751 142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV 220 (398)
T ss_pred ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence 9999999999999999999999999999999999998754 467889999999998 9999999999999999 78888
Q ss_pred cCChhHHHHHHhcCCceEeCCCCCC--------------------ccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHH
Q 019139 226 DIDPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284 (345)
Q Consensus 226 ~~~~~~~~~~~~~g~~~~i~~~~~~--------------------~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~ 284 (345)
++++++.+.++++|++.++|+++.+ ..+.+.+.+++++ ++|++|||+|. ..+...+++
T Consensus 221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~ 299 (398)
T TIGR01751 221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFV 299 (398)
T ss_pred cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHh
Confidence 8889999999999999999875421 1244566777776 89999999997 458999999
Q ss_pred hccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139 285 CHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 285 l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~ 342 (345)
++++ |+++.+|... .....++...++. ++++.++.++.. +++.++++++++++
T Consensus 300 l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~ 353 (398)
T TIGR01751 300 CRRG-GMVVICGGTT-GYNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGR 353 (398)
T ss_pred hccC-CEEEEEcccc-CCCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCC
Confidence 9997 9999999853 3345566666666 888988876543 45677778777664
No 51
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=5.1e-38 Score=273.86 Aligned_cols=286 Identities=24% Similarity=0.324 Sum_probs=240.6
Q ss_pred CCcceeeeeeeeccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeC
Q 019139 4 EGQVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVG 79 (345)
Q Consensus 4 ~~~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G 79 (345)
+..+...|++++.+.|.| ++++++++|+...++|+||.+|+-||++|+..++|.||.. ++|.+-|+|++|+|+++|
T Consensus 14 ~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vG 93 (354)
T KOG0025|consen 14 SQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVG 93 (354)
T ss_pred cccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEec
Confidence 345577899999998877 8889999999888889999999999999999999999875 789999999999999999
Q ss_pred CCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139 80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (345)
Q Consensus 80 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 159 (345)
+.+++|++||+|+.... . .|+|++|.+.+++.
T Consensus 94 s~vkgfk~Gd~VIp~~a------------------------------~------------------lGtW~t~~v~~e~~ 125 (354)
T KOG0025|consen 94 SNVKGFKPGDWVIPLSA------------------------------N------------------LGTWRTEAVFSESD 125 (354)
T ss_pred CCcCccCCCCeEeecCC------------------------------C------------------CccceeeEeecccc
Confidence 99999999999986432 1 24999999999999
Q ss_pred EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----
Q 019139 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR---- 234 (345)
Q Consensus 160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~---- 234 (345)
++++++.++++.||.+.+..+|||+.|.+..++.+||+|+-.|+ +++|++.+|+||++|+ +.|-+.|+....+.
T Consensus 126 Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~ 204 (354)
T KOG0025|consen 126 LIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQ 204 (354)
T ss_pred eEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHH
Confidence 99999999999999999999999999999999999998888898 9999999999999999 66666666655444
Q ss_pred HHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc
Q 019139 235 AKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT 313 (345)
Q Consensus 235 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~ 313 (345)
++.+||++++...+... .+........ .+.+.|+|+|+.+ ...+.+.|..| |+++.+|.++ .++++++...+++
T Consensus 205 Lk~lGA~~ViTeeel~~--~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMS-kqPv~~~ts~lIF 279 (354)
T KOG0025|consen 205 LKSLGATEVITEEELRD--RKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMS-KQPVTVPTSLLIF 279 (354)
T ss_pred HHHcCCceEecHHHhcc--hhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCcc-CCCcccccchhee
Confidence 45799999986544211 1111111223 7899999999977 78899999998 9999999865 6789999988888
Q ss_pred -ccEEEEeeecCCccc--------ccHHHHHHHHhcccc
Q 019139 314 -GRVWKGTAFGGFKSR--------SQVPWLVDKYMKKVN 343 (345)
Q Consensus 314 -~~~i~g~~~~~~~~~--------~~~~~~~~~~~~g~~ 343 (345)
+++++|++++.|... +-+.++.+++++|++
T Consensus 280 Kdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i 318 (354)
T KOG0025|consen 280 KDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKL 318 (354)
T ss_pred ccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCee
Confidence 999999999988633 223677788888875
No 52
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=3.2e-37 Score=290.29 Aligned_cols=305 Identities=27% Similarity=0.399 Sum_probs=251.6
Q ss_pred eeeeeeccCCCCeEEEEeecCCCC-CCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|||+++.+++ .+++++++.|+|. ++||+||+.++++|+.|.....|.++ ...|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6899998775 4999999999985 99999999999999999998888765 3457899999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (345)
|+|+..+...|+.|.+|+.++.+.|.+... .|.... ....|+|++|++++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYAGS---------------PNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccccc---------------CCCCCceeEEEEcccccCceEECCCC
Confidence 999998888999999999999999976432 110000 0012499999999864 99999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
++++++++++.+++|||+++. .....++++|+|+|+|++|++++|+|+.+|+.+|+++++++++.++++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999884 47888999999998899999999999999975788888889999999999975 4555
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG 324 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 324 (345)
+. .++.+.+.+++++ ++|++||++|+...+...+++++++ |+++.+|... .....++....+. ++++.+...
T Consensus 219 ~~--~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-- 292 (344)
T cd08284 219 ED--AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHT-AEEFPFPGLDAYNKNLTLRFGRC-- 292 (344)
T ss_pred CC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCC-CCCccccHHHHhhcCcEEEEecC--
Confidence 44 4567778887776 8999999999877799999999997 9999999754 2334455555555 888876532
Q ss_pred CcccccHHHHHHHHhcccc
Q 019139 325 FKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~~ 343 (345)
...+.+.+++++++++++
T Consensus 293 -~~~~~~~~~~~~~~~~~i 310 (344)
T cd08284 293 -PVRSLFPELLPLLESGRL 310 (344)
T ss_pred -CcchhHHHHHHHHHcCCC
Confidence 234678888888888764
No 53
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.5e-37 Score=292.06 Aligned_cols=304 Identities=27% Similarity=0.391 Sum_probs=252.7
Q ss_pred eeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 019139 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (345)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~ 90 (345)
|+++.+..+..+++++++.|+|.++||+||+.++++|++|++.+.|......+|.++|||++|+|+++|++++.|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57788877777999999999999999999999999999999999887755567899999999999999999999999999
Q ss_pred EE-ecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 91 VI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 91 V~-~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
|+ ......|++|.+|+.+..++|++..... .|.. ..+....|+|+||+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKY--------------PDGTITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-cccc--------------cCCCcCCCcceeEEEechhheEECCCCCCH
Confidence 97 4555789999999999999998765421 1110 001122359999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
++++.+.+.+.+||+++. ...++++++++|.|+|++|++++++|+.+|+ +|+++++++++.+.++++|++.+++...
T Consensus 146 ~~aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 999999999999999874 4468999999998889999999999999999 8999999999999999999998887764
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCccc
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR 328 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~ 328 (345)
.++.+ . ..+++|++||++|+...+..++++++++ |+++.+|.... ...+++..++. ++++.|+..+. .
T Consensus 223 -~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~ 291 (337)
T cd05283 223 -PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE--PLPVPPFPLIFGRKSVAGSLIGG---R 291 (337)
T ss_pred -hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC--CCccCHHHHhcCceEEEEecccC---H
Confidence 22211 1 2348999999999875689999999997 99999998543 23667777665 99999988663 3
Q ss_pred ccHHHHHHHHhcccc
Q 019139 329 SQVPWLVDKYMKKVN 343 (345)
Q Consensus 329 ~~~~~~~~~~~~g~~ 343 (345)
+++..+++++++++.
T Consensus 292 ~~~~~~~~~~~~~~l 306 (337)
T cd05283 292 KETQEMLDFAAEHGI 306 (337)
T ss_pred HHHHHHHHHHHhCCC
Confidence 678888888887753
No 54
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.6e-37 Score=289.27 Aligned_cols=301 Identities=26% Similarity=0.413 Sum_probs=250.9
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++...++++.|.|.|.++||+|||.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 789999998875448999999999999999999999999999988886643 2467999999999999999999999999
Q ss_pred EEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 90 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
+|+..+ ...|+.|.+|..+..+.|.+... .|.. .+ |+|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYT-VD------------------GGMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCcc-cc------------------CcceeEEEEchHHeEeCCCCCC
Confidence 998754 47899999999999999987653 2322 23 3999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
+.+++.++.++.|||+++ ...+++++++|+|+|+|++|++++|+|+. +|+ +|+++++++++++.++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999987 77889999999999999999999999998 499 899999999999999999999888875
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 326 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~ 326 (345)
.. .++.+.+.+..+ ++|.++++.++...+..++++++++ |+++.+|.... ..+++...+.. ++++.|+.++
T Consensus 216 ~~-~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--- 287 (338)
T PRK09422 216 RV-EDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG--- 287 (338)
T ss_pred cc-ccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC---
Confidence 31 345566766665 6885555555667799999999997 99999997532 34556555555 8888887643
Q ss_pred ccccHHHHHHHHhcccc
Q 019139 327 SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 327 ~~~~~~~~~~~~~~g~~ 343 (345)
..+++.++++++++|+.
T Consensus 288 ~~~~~~~~~~l~~~g~l 304 (338)
T PRK09422 288 TRQDLEEAFQFGAEGKV 304 (338)
T ss_pred CHHHHHHHHHHHHhCCC
Confidence 23678888888887753
No 55
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-37 Score=290.71 Aligned_cols=298 Identities=26% Similarity=0.390 Sum_probs=249.9
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++++++++++|.|++.++||+||+.++++|++|+....|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 78999999998899999999999999999999999999999998888766556788999999999999999998899999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|++.....|+.|.+|..+.++.|...... |.. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY---GEE-LD------------------GFFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccc---ccc-cC------------------ceeeeeeecchhceEECCCCCCH
Confidence 999988889999999999999999886542 211 22 49999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
.+++.+++++.+||+++... .++++++|+|+|+ |.+|++++|+|+.+|+ +++++++++++.+.++++ ++.+++..
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999988555 8899999999998 9999999999999999 899999999999988888 66666553
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS 327 (345)
Q Consensus 249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~ 327 (345)
++.+.+.++ +++|++||++|+.. ....+++++++ |+++.+|.......+.++...++. ++++.++... .
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 284 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA---T 284 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC---C
Confidence 244555554 37999999999855 88999999997 999999975432221233333334 8899887532 3
Q ss_pred cccHHHHHHHHhcccc
Q 019139 328 RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 328 ~~~~~~~~~~~~~g~~ 343 (345)
.+++.++++++++++.
T Consensus 285 ~~~~~~~~~~~~~~~l 300 (334)
T PRK13771 285 KRDVEEALKLVAEGKI 300 (334)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 4778889998887753
No 56
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=4.5e-37 Score=289.20 Aligned_cols=300 Identities=26% Similarity=0.388 Sum_probs=246.8
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
||++++.+++.++++.+.|.|+|+++||+||+.++++|++|..++.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999888889999999999999999999999999999998766532 1224678999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+..+..+|..|.+|+.+++++|++..+ .+.+ .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVN-RP------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeec-CC------------------CcceeeEEechHHeEECcCC
Confidence 99999999999999999999999999987532 2221 22 49999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
+++.+++.+ .++.++++++.. ...+|++|+|.|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888754 466666665532 34689999998889999999999999998668888888999999999999999988
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG 324 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 324 (345)
++ .++.+.+.+++.+ ++|++|||.|+...+..++++++++ |+++.+|.... ..+++...+.. ++++.++....
T Consensus 216 ~~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~~ 290 (341)
T PRK05396 216 AK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG--DMAIDWNKVIFKGLTIKGIYGRE 290 (341)
T ss_pred cc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CCcccHHHHhhcceEEEEEEccC
Confidence 76 5677778777766 8999999999877799999999997 99999997543 33444555555 88998875322
Q ss_pred CcccccHHHHHHHHhcc
Q 019139 325 FKSRSQVPWLVDKYMKK 341 (345)
Q Consensus 325 ~~~~~~~~~~~~~~~~g 341 (345)
..+.+..++++++++
T Consensus 291 --~~~~~~~~~~~~~~~ 305 (341)
T PRK05396 291 --MFETWYKMSALLQSG 305 (341)
T ss_pred --ccchHHHHHHHHHcC
Confidence 224455677777766
No 57
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=6.6e-37 Score=290.73 Aligned_cols=305 Identities=25% Similarity=0.379 Sum_probs=244.0
Q ss_pred eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCC
Q 019139 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
..++++++..++. +++++.+.|.|.++||+||+.++++|++|+....+... ...+|.++|||++|+|+++|++++.
T Consensus 16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 4455555566644 88999999999999999999999999999998876321 1135789999999999999999999
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
|++||+|++.+...|+.|.+|+.+..+.|+.... .+....+ |+|++|++++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~------------------g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVH------------------GSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCC------------------CcccceEEcchHHeEECC
Confidence 9999999999999999999999999999986321 1111012 499999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
+++++.+++.. .++.++++++ ...++.++++|+|+|+|++|++++|+|+++|+..++++++++++.+.++++|++.++
T Consensus 154 ~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 99999988752 2455678776 778889999999998899999999999999996788888899999999999999887
Q ss_pred CCCCCCccHHHHHHhh---cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139 245 NPKDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT 320 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~---~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 320 (345)
++.....++.+.+.++ +++++|++||++|+...+..++++++++ |+++.+|.... ...+.+..+.. ++++.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~ 308 (364)
T PLN02702 232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGV 308 (364)
T ss_pred ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEe
Confidence 7643224565655544 3348999999999777799999999997 99999997432 24445555666 8999987
Q ss_pred eecCCcccccHHHHHHHHhcccc
Q 019139 321 AFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
+.. ...+.++++++++++.
T Consensus 309 ~~~----~~~~~~~~~~~~~~~l 327 (364)
T PLN02702 309 FRY----RNTWPLCLEFLRSGKI 327 (364)
T ss_pred ccC----hHHHHHHHHHHHcCCC
Confidence 632 2467778888877753
No 58
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=7.4e-37 Score=287.71 Aligned_cols=302 Identities=29% Similarity=0.454 Sum_probs=255.1
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++. +.+++.+.|++.+++|+||+.++++|+.|+..+.|.++....|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999988874 99999999999999999999999999999999888764344578999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce-----EEEcC
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-----VAKID 164 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~iP 164 (345)
+|+..+..+|+.|.+|..+++++|...... |.. . .|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GNL-Y------------------DGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee---ccC-C------------------CCcceeeEEecccccccccEEECC
Confidence 999999999999999999999999876532 211 2 24999999999998 99999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
+++++.+++.+ .++.+||+++. ..+++++++|+|+|+|++|++++|+|+..|++.|+++++++++.+.++++|++.++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999999876 68889999884 45899999999998899999999999999994388888999999999999999888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF 322 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 322 (345)
++++ .++.+.+.+...+ ++|++||++++...+...+++++++ |+++.+|.........+++..+.. ++++.++..
T Consensus 216 ~~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 216 DAAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 8876 5677778777777 8999999999876689999999997 999999875433335556555655 888887764
Q ss_pred cCCcccccHHHHHHHHhccc
Q 019139 323 GGFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~g~ 342 (345)
.. .+.+.+++++++++.
T Consensus 293 ~~---~~~~~~~~~l~~~~~ 309 (343)
T cd08235 293 AS---PEDYKEALELIASGK 309 (343)
T ss_pred CC---hhhHHHHHHHHHcCC
Confidence 32 356788888887775
No 59
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=7.4e-37 Score=291.52 Aligned_cols=312 Identities=29% Similarity=0.386 Sum_probs=249.3
Q ss_pred eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
||++++.+++ +++++++|.|.+ .++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 6889998876 499999999996 799999999999999999999988765 3468999999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (345)
|+|+..+..+|+.|.+|+.++.+.|.+..+. ..| . ..| ..+ + ....|+|++|+++|.+ .++++|++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~-~~~-~-~~~-----~~~--~--~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG-RAG-G-AYG-----YVD--M--GPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc-ccc-c-ccc-----ccc--c--CCCCCeeeeEEEeecccCcEEECCCC
Confidence 9999999999999999999999999864321 000 0 000 000 0 0012599999999976 89999999
Q ss_pred CChh---hhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139 167 APLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (345)
Q Consensus 167 l~~~---~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~ 243 (345)
+++. +++.+..++++||+++ ...++.++++|+|.|+|++|++++|+|+++|+..|+++++++++.++++++|+ ..
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~ 224 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IP 224 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eE
Confidence 9998 5677888999999988 78889999999999889999999999999998678889999999999999998 45
Q ss_pred eCCCCCCccHHHHHHhhcCCCccEEEEccCCHH-----------HHHHHHHHhccCCeEEEEeccCCCC-----------
Q 019139 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKGWGTSVIVGVAASG----------- 301 (345)
Q Consensus 244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~-----------~~~~~~~~l~~~~G~~v~~G~~~~~----------- 301 (345)
+++.+ .++.+.+.+++++++|++||++|+.. .+..++++++++ |+++.+|.....
T Consensus 225 v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~ 301 (375)
T cd08282 225 IDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQ 301 (375)
T ss_pred eccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccC
Confidence 66654 45667777776668999999999752 488999999997 999988874321
Q ss_pred CceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139 302 QEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 302 ~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
..+.++...++. +.++.++... ..+.+.++++++++++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l 341 (375)
T cd08282 302 GELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRA 341 (375)
T ss_pred ccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCC
Confidence 124456556655 7777776432 23567888888877654
No 60
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=9.9e-37 Score=286.34 Aligned_cols=299 Identities=32% Similarity=0.519 Sum_probs=253.1
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++. +++.++|.|++.++||+|||.++++|+.|+....|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999998875 99999999999999999999999999999999888766555688999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|+..+..+|+.|..|+.+++|.|..... .+++ . .|+|++|+.++.+ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVH-R------------------DGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeec-C------------------CCcceeEEEechh-eEECCCCCCH
Confidence 99998888999999999999999943211 1111 1 2499999999999 9999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
++++++ ..++++++++ ...++.++++|||+|+|.+|++++|+|+.+|+ +|+++++++++.+.++++|+++++++.+
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 999877 4778888876 77889999999999889999999999999999 8999989999999999999999998876
Q ss_pred CccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS 327 (345)
Q Consensus 250 ~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~ 327 (345)
.++.+.+.+++++ ++|++||++|+...+..++++|+++ |+++.+|... ....+++..+.. ++++.++.. ..
T Consensus 213 -~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~~---~~ 285 (337)
T cd08261 213 -EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSRN---AT 285 (337)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEecc---CC
Confidence 4577788877776 8999999998877789999999997 9999998754 234556655655 888887642 23
Q ss_pred cccHHHHHHHHhcccc
Q 019139 328 RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 328 ~~~~~~~~~~~~~g~~ 343 (345)
.+.+.++++++++|.+
T Consensus 286 ~~~~~~~~~l~~~~~i 301 (337)
T cd08261 286 REDFPDVIDLLESGKV 301 (337)
T ss_pred hhhHHHHHHHHHcCCC
Confidence 3577888888887753
No 61
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=9.4e-37 Score=287.33 Aligned_cols=301 Identities=29% Similarity=0.440 Sum_probs=249.7
Q ss_pred eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|||+++.+++. +++++.|.|+| +++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 68999988775 99999999996 8999999999999999999988877653 457899999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (345)
|+|+..+...|+.|.+|..++.+.|.+... +|.. .+| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAF-VDG------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCC-CCC------------------ceEEEEEcchhhCceEECCCC
Confidence 999886677899999999999999986543 2221 334 99999999975 99999999
Q ss_pred CChhhhc-----ccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139 167 APLDKVC-----LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (345)
Q Consensus 167 l~~~~aa-----~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 241 (345)
+++..+. .+...+.+||+++ ....++++++|+|.|+|++|++++|+|+++|+..++++++++++.+.++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9872221 1225678899887 567889999999988899999999999999996688888888899999999999
Q ss_pred eEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEE
Q 019139 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKG 319 (345)
Q Consensus 242 ~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g 319 (345)
.++++.+ .++.+.+.+++++ ++|+++|++|++..+..++++++++ |+++.+|.... ...+++...+. ++++.+
T Consensus 216 ~v~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 216 DIVAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAG 290 (345)
T ss_pred eEecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEE
Confidence 9998876 4677778877776 8999999999877899999999997 99999987542 45566644445 999988
Q ss_pred eeecCCcccccHHHHHHHHhcccc
Q 019139 320 TAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
.... ..+.+.++++++++++.
T Consensus 291 ~~~~---~~~~~~~~~~~~~~~~l 311 (345)
T cd08287 291 GPAP---VRRYLPELLDDVLAGRI 311 (345)
T ss_pred ecCC---cHHHHHHHHHHHHcCCC
Confidence 6433 23678888888887763
No 62
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.4e-37 Score=288.09 Aligned_cols=275 Identities=21% Similarity=0.232 Sum_probs=226.3
Q ss_pred eeeeeeccCCC-----CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139 10 CKAAVAWEPNK-----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (345)
Q Consensus 10 ~~a~~~~~~~~-----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~ 83 (345)
|||+++.+++. .++++++|.|+|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 68999998885 3788899999999999999999999999999999887653 35789999999999999999998
Q ss_pred C-CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139 84 E-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (345)
Q Consensus 84 ~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 162 (345)
+ |++||+|+.... .+ |+|+||+++|.+.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------~~------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------SY------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------CC------------------CcchheeeecHHHeEE
Confidence 6 999999984310 01 3999999999999999
Q ss_pred cCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE-c-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-G-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (345)
Q Consensus 163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~-G-ag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 240 (345)
+|+++++.+++++++...|||. +...... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++.+.++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 9999999999988888899975 4455555 45556665 4 49999999999999999 89999999999999999999
Q ss_pred ceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEE
Q 019139 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK 318 (345)
Q Consensus 241 ~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~ 318 (345)
++++++.+ .++.+.+.+++.+ ++|++||++|+.. ....+++++++ |+++.+|.........++...++. ++++.
T Consensus 190 ~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 190 EYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred cEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 99998876 5677888888877 8999999999866 67789999997 999999974332222355556555 99999
Q ss_pred EeeecCCcc---cccHHHHHHHHh
Q 019139 319 GTAFGGFKS---RSQVPWLVDKYM 339 (345)
Q Consensus 319 g~~~~~~~~---~~~~~~~~~~~~ 339 (345)
|+..+.+.. .+++++++++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~ 289 (324)
T cd08291 266 GFWLTTWLQKLGPEVVKKLKKLVK 289 (324)
T ss_pred EEEHHHhhcccCHHHHHHHHHHHh
Confidence 998765432 345677777765
No 63
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.9e-36 Score=289.56 Aligned_cols=304 Identities=26% Similarity=0.402 Sum_probs=247.8
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC------CC-CCCCcccCcceeEEEEEeCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD------PE-GLFPCILGHEAAGIVESVGEGV 82 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~-~~~p~~~G~e~~G~Vv~~G~~v 82 (345)
+.+.++..+ .++++++|.|+++++||+||+.++++|++|+..+.+.. +. .++|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 444455533 49999999999999999999999999999998876321 21 3568899999999999999999
Q ss_pred CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (345)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 162 (345)
+.|++||+|++.+..+|+.|..|..+++++|..... .|++ .+| +|++|+.++.+.+++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~-~~g------------------~~~~~v~v~~~~~~~ 164 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFS-ADG------------------AFAEYIAVNARYAWE 164 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeec-CCC------------------cceeeEEechHHeEE
Confidence 999999999999999999999999999999986542 3332 234 999999999999999
Q ss_pred cCCCC-------ChhhhcccccchhhhhHHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 019139 163 IDPQA-------PLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (345)
Q Consensus 163 iP~~l-------~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~ 234 (345)
+|+++ ++. ++++..++++||+++... .++++|++|+|+|+|++|++++|+|+.+|+..|+++++++++.++
T Consensus 165 lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~ 243 (384)
T cd08265 165 INELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNL 243 (384)
T ss_pred CCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 99864 444 556667889999998666 689999999999889999999999999998679999999999999
Q ss_pred HHhcCCceEeCCCCC-CccHHHHHHhhcCC-CccEEEEccCCH-HHHHHHHHHhccCCeEEEEeccCCCCCceecChhhh
Q 019139 235 AKNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL 311 (345)
Q Consensus 235 ~~~~g~~~~i~~~~~-~~~~~~~~~~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~ 311 (345)
++++|++.++++++. ..++.+.+.+++.+ ++|+++|+.|+. ..+..++++|+++ |+++.+|.... .+++++..+
T Consensus 244 ~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~ 320 (384)
T cd08265 244 AKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVL 320 (384)
T ss_pred HHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHH
Confidence 999999998887642 23677788888877 899999999973 4588999999997 99999997432 355565555
Q ss_pred cc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139 312 VT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 312 ~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
.. ..++.|+.... ....+.++++++++++.
T Consensus 321 ~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l 351 (384)
T cd08265 321 QVRRAQIVGAQGHS--GHGIFPSVIKLMASGKI 351 (384)
T ss_pred hhCceEEEEeeccC--CcchHHHHHHHHHcCCC
Confidence 55 77888875321 23568889999987753
No 64
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2.2e-36 Score=283.39 Aligned_cols=302 Identities=31% Similarity=0.476 Sum_probs=257.4
Q ss_pred eeeeeeccCCCC-eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 10 CKAAVAWEPNKP-LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 10 ~~a~~~~~~~~~-~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
||++++..++++ +.+++.|.|.+.+++|+||+.++++|+.|.....|.++ ....|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999887 68888889999999999999999999999999888775 2356789999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+..+..+|+.|.+|..++.+.|..... .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLG-ID------------------GGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccc-cC------------------CcceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999965432 2222 22 499999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
++.+++.++.++.+||+++.....++++++|+|.|+|++|++++++|+.+|+ +|++++.++++.+.++++|++.+++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999998888889999999998889999999999999999 799999999999999999998888776
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 325 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 325 (345)
+ ....+.+ ....+ ++|+++|++|....+..++++|+++ |+++.+|... ....++...++. +.++.|++..
T Consensus 218 ~--~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 289 (338)
T cd08254 218 D--DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGR--DKLTVDLSDLIARELRIIGSFGG-- 289 (338)
T ss_pred C--cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCC--CCCccCHHHHhhCccEEEEeccC--
Confidence 5 3444555 44444 8999999999877799999999997 9999998743 234566666666 8899987643
Q ss_pred cccccHHHHHHHHhcccc
Q 019139 326 KSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~ 343 (345)
..+.+.+++++++++.+
T Consensus 290 -~~~~~~~~~~ll~~~~l 306 (338)
T cd08254 290 -TPEDLPEVLDLIAKGKL 306 (338)
T ss_pred -CHHHHHHHHHHHHcCCC
Confidence 34677888888877754
No 65
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.9e-36 Score=283.51 Aligned_cols=303 Identities=32% Similarity=0.494 Sum_probs=257.7
Q ss_pred eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
|||+++.+++ ..+++++++.|.|.++||+||+.++++|++|..++.|.++. .+.|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899998876 34999999999999999999999999999999988877643 245778999999999999999999999
Q ss_pred CCEEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 88 GDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 88 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
||+|+..+ ...|+.|.+|..++.+.|..... .|.. .. |+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYT-VD------------------GTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccc-cC------------------CcceeEEEeccccEEECCCC
Confidence 99998765 58899999999999999987643 2221 22 48999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+++.+++.++..+.|||+++.. .+++++++|+|+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998755 58899999999998 6799999999999999 8999999999999999999999988
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
+.+ .++.+.+.+++++ ++|++||+.++...+..++++++++ |+++.+|... ....++++..++. ++++.++...
T Consensus 217 ~~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FKK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CCC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEeccC
Confidence 876 4677778887766 8999999888777799999999997 9999999754 3334666666656 9999887543
Q ss_pred CCcccccHHHHHHHHhcccc
Q 019139 324 GFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~~ 343 (345)
..+++.++++++++++.
T Consensus 293 ---~~~~~~~~~~~~~~~~l 309 (341)
T cd08297 293 ---TRQDLQEALEFAARGKV 309 (341)
T ss_pred ---CHHHHHHHHHHHHcCCC
Confidence 24678888888887753
No 66
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.8e-36 Score=282.05 Aligned_cols=291 Identities=23% Similarity=0.367 Sum_probs=234.0
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC-----------CCCCCcccCcceeEEEEEe
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV 78 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~Vv~~ 78 (345)
|||+++.++ ++++++++.|++.++||+||+.++++|+.|++.+.|... ....|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689998876 699999999999999999999999999999998877321 2235789999999999999
Q ss_pred CCCCCC-CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139 79 GEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (345)
Q Consensus 79 G~~v~~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 157 (345)
|++++. +++||+|+..+...|+.|.+|..+... ..+ |+|++|++++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------~~~------------------g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------EAP------------------GGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------CCC------------------CceeeeEEech
Confidence 999987 999999999999999999999432110 012 49999999999
Q ss_pred ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (345)
Q Consensus 158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~ 237 (345)
+.++++|+++++++++ ++.++++||+++ ...+++++++|+|+|+|++|++++|+|+.+|++.++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999887 566888999984 78889999999999889999999999999999668888889999999999
Q ss_pred cCCceEeCCCCCCc--cHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-
Q 019139 238 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT- 313 (345)
Q Consensus 238 ~g~~~~i~~~~~~~--~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~- 313 (345)
+|++.++++++... .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|..... ..+.+...+.
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~ 280 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMES--DNIEPALAIRK 280 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCC--CccCHHHHhhc
Confidence 99988888765211 222 33444444 8999999999865688899999997 999999975322 2233333333
Q ss_pred ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139 314 GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 314 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 343 (345)
++++.++... ..+++.++++++++|++
T Consensus 281 ~~~~~~~~~~---~~~~~~~~~~l~~~g~i 307 (341)
T cd08262 281 ELTLQFSLGY---TPEEFADALDALAEGKV 307 (341)
T ss_pred ceEEEEEecc---cHHHHHHHHHHHHcCCC
Confidence 7888776532 22577888888887754
No 67
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.8e-36 Score=281.70 Aligned_cols=291 Identities=28% Similarity=0.385 Sum_probs=241.4
Q ss_pred eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
||++++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+. +...+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6889987766 45888888888899999999999999999999887642 222357799999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|+..+..+|+.|.+|+.++.++|..... .|+. . .|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVV-S------------------NGGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eecc-C------------------CCceeeEEEcCHHHceeCCCCCC
Confidence 999999888999999999999999987543 2221 2 24999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
+++++.+++++.+||+++. ..+++++++|+|+|+ |++|++++++|+++|+ +|+++++ .+.++++|++.+++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence 9999999999999999875 488999999999998 9999999999999999 7887753 3667889998888765
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 326 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~ 326 (345)
+ ..+.+.+++ +++|+++|++|+. .+...+++++++ |+++.+|.. ......++...+.. +.++.++..+.
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGGT-- 281 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCCC--
Confidence 3 244556566 6899999999984 599999999997 999999974 22346677777766 88898886553
Q ss_pred ccccHHHHHHHHhc
Q 019139 327 SRSQVPWLVDKYMK 340 (345)
Q Consensus 327 ~~~~~~~~~~~~~~ 340 (345)
.+++.++++++.+
T Consensus 282 -~~~~~~~~~l~~~ 294 (325)
T cd08264 282 -RKELLELVKIAKD 294 (325)
T ss_pred -HHHHHHHHHHHHc
Confidence 3677778877753
No 68
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=8e-36 Score=280.77 Aligned_cols=304 Identities=29% Similarity=0.449 Sum_probs=251.8
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+.++ +++++.+.|++.++||+||+.++++|+.|.....+.++ ...|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999998876 99999999999999999999999999999988877652 24578999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|+..+...|+.|.+|+.++...|+.... .|.. . .|+|++|+++|.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSR-R------------------DGAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---Eecc-c------------------CCcccceEEechHHeEECcCCCCH
Confidence 99998888999999999999999987642 2211 2 249999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
++++.+ .++.+||+++. ..+++++++|+|+|+|.+|++++|+|+.+|+..++++++++++.+.++++|++.++++++
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 999887 57889999884 778899999999988999999999999999944999988899999999999998888876
Q ss_pred CccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCcee-cChhhhcc-ccEEEEeeecCCc
Q 019139 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGTAFGGFK 326 (345)
Q Consensus 250 ~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~~i~g~~~~~~~ 326 (345)
.. .+.+....++ ++|++||++|+...+..++++|+++ |+++.+|.......+. .+...++. ++++.|+......
T Consensus 214 -~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 214 -ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred -cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence 33 5566666666 8999999998877789999999997 9999999754321222 22333345 8999998764322
Q ss_pred --ccccHHHHHHHHhcccc
Q 019139 327 --SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 327 --~~~~~~~~~~~~~~g~~ 343 (345)
..+.+.++++++++++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~l 309 (343)
T cd08236 291 PFPGDEWRTALDLLASGKI 309 (343)
T ss_pred ccchhhHHHHHHHHHcCCC
Confidence 13567778888887753
No 69
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.2e-36 Score=281.75 Aligned_cols=298 Identities=32% Similarity=0.484 Sum_probs=244.7
Q ss_pred eeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCC-CCC--CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPE--GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 12 a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~-~~~--~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|+++.+++. +++++.|.|+|.++||+|||.++++|+.|...+.+. .+. ...|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467777754 999999999999999999999999999998876322 111 1357789999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|++.+..+|+.|.+|+.+.+++|+..... +..... |+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATPPVD------------------GTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccccCC------------------CceeeeEEecHHHcEECcCCCC
Confidence 9999988999999999999999999865331 100012 4999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
+.+++.+ .++.+|++++ ....++++++|+|+|+|++|++++|+|+.+|++.|+++++++++.+.++++|++.+++.++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999876 5788999886 8889999999999988999999999999999944888989999999999999999998875
Q ss_pred CCcc---HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 249 HDKP---IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 249 ~~~~---~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
.+ +.+.+.+.+++ ++|++||++|+...+...+++++++ |+++.+|.... ...+++..+.. ++++.++...
T Consensus 217 --~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 291 (343)
T cd05285 217 --EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP--EVTLPLSAASLREIDIRGVFRY 291 (343)
T ss_pred --ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHhhCCcEEEEeccC
Confidence 33 36667777776 8999999999876689999999997 99999996432 23445444555 8888877532
Q ss_pred CCcccccHHHHHHHHhccc
Q 019139 324 GFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~ 342 (345)
.+.+.++++++++++
T Consensus 292 ----~~~~~~~~~~l~~~~ 306 (343)
T cd05285 292 ----ANTYPTAIELLASGK 306 (343)
T ss_pred ----hHHHHHHHHHHHcCC
Confidence 256777888887765
No 70
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=3.2e-36 Score=280.83 Aligned_cols=278 Identities=24% Similarity=0.298 Sum_probs=235.9
Q ss_pred eeeeeeccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccCcceeEEEEEeCCCCCCC
Q 019139 10 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEV 85 (345)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~v~~~ 85 (345)
|||+++.+++++ ++++++|.|.+.++||+|||.++++|+.|++.+.|.++ ....|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999887753 78899999999999999999999999999999888765 23568899999999999999999999
Q ss_pred CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (345)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (345)
++||+|+... .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAP-------------------------------VH------------------GTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEecc-------------------------------CC------------------CcceeEEEEchHHeEECCC
Confidence 9999998532 12 3899999999999999999
Q ss_pred CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
++++.+++.++++..+||+++ ...+++++++|+|+|+ |.+|++++|+|+++|+ .++++..++++.+.++++|++.++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999998999999987 5578999999999987 9999999999999999 788888888888888889998888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF 322 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 322 (345)
+..+ .++.+.+.+++.+ ++|++||++|+.. +..++++++++ |+++.+|.. .....++++..++. ++++.++..
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 190 STEQ--PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSM-SGEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred cCCC--chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecC-CCCCCcCCHHHHhhCCCEEEEEEc
Confidence 8765 5677888888887 9999999999864 88999999997 999999974 23345666655556 999999876
Q ss_pred cCCc-------ccccHHHHHHHHhcccc
Q 019139 323 GGFK-------SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 323 ~~~~-------~~~~~~~~~~~~~~g~~ 343 (345)
..+. ..+.+.++++++.+|++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i 292 (324)
T cd08292 265 GRWSQEMSVEYRKRMIAELLTLALKGQL 292 (324)
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHCCCc
Confidence 5321 12457788888888764
No 71
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=8.9e-36 Score=280.45 Aligned_cols=300 Identities=29% Similarity=0.412 Sum_probs=242.6
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++.+++..+.+.+.+.|+|.++||+||+.++++|+.|+..+.+.. .....|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999888779999999999999999999999999999988754421 1224577899999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+..+..+|+.|++|..++++.|.+.. ..|.. . .|+|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------------~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVD-T------------------DGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEecc-C------------------CCcceEEEEechHHcEECcCC
Confidence 9999999888999999999999999997531 22222 2 249999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
++++.+ +++.++.++++++. ....++++|+|.|+|++|++++|+|+.+|..+|+++++++++.+.++++|++++++.
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998544 56667888888764 455789999998889999999999999998568888888999999999999888877
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChh-hhcc-ccEEEEeeec
Q 019139 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVT-GRVWKGTAFG 323 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~-~~~i~g~~~~ 323 (345)
++ .++. .+.++.++ ++|++||++|+......++++|+++ |+++.+|.... ...++.. .+.. ++++.++..
T Consensus 216 ~~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~- 288 (341)
T cd05281 216 RE--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG--PVDIDLNNLVIFKGLTVQGITG- 288 (341)
T ss_pred cc--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC--CcccccchhhhccceEEEEEec-
Confidence 65 4566 67777776 9999999999877789999999997 99999987543 2333322 2333 788887752
Q ss_pred CCcccccHHHHHHHHhccc
Q 019139 324 GFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~ 342 (345)
....+.+.+++++++++.
T Consensus 289 -~~~~~~~~~~~~~l~~~~ 306 (341)
T cd05281 289 -RKMFETWYQVSALLKSGK 306 (341)
T ss_pred -CCcchhHHHHHHHHHcCC
Confidence 222356777888887775
No 72
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=9e-36 Score=278.45 Aligned_cols=297 Identities=34% Similarity=0.540 Sum_probs=247.7
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++..+++++.++++|.|.+.++||+||+.++++|+.|++...|..+....|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999987666799999999999999999999999999999999988776666788999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|+......|+.|.+|+.+.++.|.+... .|.. .. |+|++|++++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRAE---YGEE-VD------------------GGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCccc---cccc-cC------------------CeeeeEEEechhheEECCCCCCH
Confidence 99999888999999999999999987522 3322 22 49999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 248 (345)
++++.+++++.+||+++.. ..+.++++++|+|+ |++|++++++++..|+ +|+++++++++.+.+++++.+.+++..+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999998866 88899999999998 9999999999999999 8888888888888888889877775532
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS 327 (345)
Q Consensus 249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~ 327 (345)
+.+.+.+.. ++|++++++|... ...++++++++ |+++.+|..... ...++...... ++++.++... .
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~ 284 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPD-PAPLRPGLLILKEIRIIGSISA---T 284 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCC-CcCCCHHHHHhCCcEEEEecCC---C
Confidence 445555443 7999999999866 88999999997 999999874322 22233333333 7788777422 3
Q ss_pred cccHHHHHHHHhccc
Q 019139 328 RSQVPWLVDKYMKKV 342 (345)
Q Consensus 328 ~~~~~~~~~~~~~g~ 342 (345)
.+++.++++++++|.
T Consensus 285 ~~~~~~~~~~~~~~~ 299 (332)
T cd08259 285 KADVEEALKLVKEGK 299 (332)
T ss_pred HHHHHHHHHHHHcCC
Confidence 467788888887775
No 73
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.2e-35 Score=276.77 Aligned_cols=284 Identities=25% Similarity=0.385 Sum_probs=236.3
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.+++ +++++++|.|+++++||+||+.++++|++|.....|.++ .|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 6899999876 499999999999999999999999999999999888764 5789999999999999997 67999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|...+...|+.|.+|..+..+.|..... .++...+ |+|++|++++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD------------------GAFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC------------------CceEEEEEechHHeEECcCCCCH
Confidence 99999999999999999999999987543 2221123 39999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
++++.+ .+..++|. +.+..+++++++|+|+|+|.+|++++|+|+.+|+ +|++++.++++.+.++++|++.++++.+.
T Consensus 133 ~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~ 209 (319)
T cd08242 133 EQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE 209 (319)
T ss_pred HHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence 888764 34556665 4578889999999999889999999999999999 69999999999999999999888776431
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCccc
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR 328 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~ 328 (345)
..++++|++||++|+...+..++++++++ |+++..+... ....++...++. ++++.|+..+
T Consensus 210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~----- 271 (319)
T cd08242 210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA--GPASFDLTKAVVNEITLVGSRCG----- 271 (319)
T ss_pred ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC--CCCccCHHHheecceEEEEEecc-----
Confidence 12238999999999877789999999997 9999877643 245566666655 8899888643
Q ss_pred ccHHHHHHHHhcccc
Q 019139 329 SQVPWLVDKYMKKVN 343 (345)
Q Consensus 329 ~~~~~~~~~~~~g~~ 343 (345)
.+.+++++++++++
T Consensus 272 -~~~~~~~~~~~~~l 285 (319)
T cd08242 272 -PFAPALRLLRKGLV 285 (319)
T ss_pred -cHHHHHHHHHcCCC
Confidence 26777788877753
No 74
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.1e-35 Score=276.66 Aligned_cols=300 Identities=30% Similarity=0.467 Sum_probs=251.3
Q ss_pred eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd 89 (345)
|||+++.++++ +++.+.+.|++.++||+||++++++|+.|.....|.++. .+|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998885 999999999999999999999999999999998887654 3778999999999999999999999999
Q ss_pred EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
+|+.....+|+.|.+|..++++.|....+ .|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVT-RN------------------GGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccC-CC------------------CcceeEEEecHHHcEECcCCCCH
Confidence 99998889999999999999999987643 2211 22 49999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
.+++.+ .++.++++++ ...+++++++|+|+|+|.+|.+++++|++.|+..|+++++++++.+.++++|++.+++..+
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 998776 6788999887 7888999999999988999999999999999944888999999999999999988887765
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCccc
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR 328 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~ 328 (345)
.++... +...+.++|++||++|+...+...+++++++ |+++.+|........++++..++. ++++.++... .
T Consensus 214 -~~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 286 (334)
T cd08234 214 -EDPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----P 286 (334)
T ss_pred -CCHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----H
Confidence 333333 3333348999999998777789999999997 999999975433355666666665 8888887632 2
Q ss_pred ccHHHHHHHHhcccc
Q 019139 329 SQVPWLVDKYMKKVN 343 (345)
Q Consensus 329 ~~~~~~~~~~~~g~~ 343 (345)
+.+.++++++++++.
T Consensus 287 ~~~~~~~~~~~~~~l 301 (334)
T cd08234 287 YTFPRAIALLESGKI 301 (334)
T ss_pred HHHHHHHHHHHcCCC
Confidence 457778888877653
No 75
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=2.2e-35 Score=276.27 Aligned_cols=302 Identities=25% Similarity=0.384 Sum_probs=250.7
Q ss_pred eeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++...+. .+.+.+.+.|.+.+++|+||+.++++|++|++.+.|..+. ..+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 68898884433 2777888888889999999999999999999988886542 25678999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|++.+...|+.|.+|.+++++.|++... .|.. . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~------------------~g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEH-V------------------DGGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccc-c------------------CcceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999987532 2222 1 248999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+++.+++.+++++.+||+++.+..++.++++++|+|+ +++|++++++++..|+ +++.+++++++.+.++.++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999899999999888888999999999998 7999999999999999 7899999999989888888877776
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
..+ .++.+.+.+.+.+ ++|++++++|... +...+++++++ |+++.+|.... ....+++...+. ++++.++...
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 YRK--EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTG-YEAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred cCC--hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCC-CCCCcCHHHHhhcceEEEEEecC
Confidence 654 4555666666655 8999999999854 88999999997 99999987543 233455544444 8999888654
Q ss_pred CCcccccHHHHHHHHhccc
Q 019139 324 GFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~ 342 (345)
. ..++.+++++++++.
T Consensus 293 ~---~~~~~~~~~~l~~~~ 308 (342)
T cd08266 293 T---KAELDEALRLVFRGK 308 (342)
T ss_pred C---HHHHHHHHHHHHcCC
Confidence 3 356777888887764
No 76
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.3e-35 Score=276.05 Aligned_cols=293 Identities=27% Similarity=0.380 Sum_probs=244.9
Q ss_pred eeeeeeccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 019139 10 CKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (345)
Q Consensus 10 ~~a~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~ 85 (345)
|||+++.+++. ++.+.+.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999998884 58888888888999999999999999999999988877655678899999999999999999999
Q ss_pred CCCCEEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 86 QPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 86 ~~Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
++||+|+..+ ...|+.|.+|..+.++.|+.... .|.. .+ |+|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYT-VD------------------GGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccc-cC------------------CceEEEEEecchhEEECC
Confidence 9999997654 47899999999999999987653 2222 22 389999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
+++++.+++.+++++.+||+++ +..+++++++|+|+|+|++|++++++|++.|. +|++++.++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999988 88999999999999999999999999999999 899999999999999999998877
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecC
Q 019139 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 324 (345)
+.... ...++|+++++.+....+..++++++++ |+++.+|... .....++...+..+..|.++...
T Consensus 217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~- 282 (329)
T cd08298 217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYELLWGEKTIRSVANL- 282 (329)
T ss_pred ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhhhhCceEEEEecCC-
Confidence 76541 1237999999877777799999999997 9999998632 22223343333337788877533
Q ss_pred CcccccHHHHHHHHhccc
Q 019139 325 FKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~ 342 (345)
..+.+.+++++++++.
T Consensus 283 --~~~~~~~~~~l~~~~~ 298 (329)
T cd08298 283 --TRQDGEEFLKLAAEIP 298 (329)
T ss_pred --CHHHHHHHHHHHHcCC
Confidence 2356777888887764
No 77
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=4.4e-35 Score=274.19 Aligned_cols=297 Identities=31% Similarity=0.467 Sum_probs=247.5
Q ss_pred eeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 019139 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (345)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~ 90 (345)
||+++.++|..+++++.|.|.+.+++|+||+.++++|++|...+.|..+...+|.++|+|++|+|+++|++++++++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899999767999999999999999999999999999999998887654457889999999999999999999999999
Q ss_pred EEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139 91 VIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (345)
Q Consensus 91 V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 169 (345)
|++.+. ..|+.|.+|+.++.+.|.+..+. ++. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-TQ------------------GGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-cC------------------CccccEEEEcHHHeEECCCCCCH
Confidence 987543 67999999999999999986542 211 12 48999999999999999999999
Q ss_pred hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (345)
Q Consensus 170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~ 249 (345)
.+++.+++.+.+||+++.. .+++++++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999999999999998844 788999999999888899999999999999 8999999999999999999988887654
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCccc
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR 328 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~ 328 (345)
...... ..+++|+++|++++......++++++++ |+++.+|.... ....++...++. +.++.++..+. .
T Consensus 216 -~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (330)
T cd08245 216 -ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPES-PPFSPDIFPLIMKRQSIAGSTHGG---R 285 (330)
T ss_pred -cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCC-CccccchHHHHhCCCEEEEeccCC---H
Confidence 222222 2247999999998777789999999997 99999987432 233333455655 88998887653 3
Q ss_pred ccHHHHHHHHhccc
Q 019139 329 SQVPWLVDKYMKKV 342 (345)
Q Consensus 329 ~~~~~~~~~~~~g~ 342 (345)
..+.++++++.++.
T Consensus 286 ~~~~~~~~ll~~~~ 299 (330)
T cd08245 286 ADLQEALDFAAEGK 299 (330)
T ss_pred HHHHHHHHHHHcCC
Confidence 56777788777664
No 78
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4e-35 Score=276.77 Aligned_cols=281 Identities=20% Similarity=0.264 Sum_probs=222.8
Q ss_pred cceeeeeeeeccCC-C-----CeEEEE---eecCC-CCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCc--ceeE
Q 019139 6 QVITCKAAVAWEPN-K-----PLVIED---VQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH--EAAG 73 (345)
Q Consensus 6 ~~~~~~a~~~~~~~-~-----~~~~~~---~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G 73 (345)
++.+.|++++.+.. . .|++.+ ++.|. +++||||||+.++++|+.|...+.+..+....|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 34567888886432 1 277777 46663 48999999999999999987644332222235889998 8899
Q ss_pred EEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeE
Q 019139 74 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 153 (345)
Q Consensus 74 ~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~ 153 (345)
+|+.+|++++.|++||+|+.. |+|+||+
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~ 112 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYS 112 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEEE
Confidence 999999999999999999721 2799999
Q ss_pred Eeecce--EEE--cCCCCChh-hhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 019139 154 VVHDVS--VAK--IDPQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (345)
Q Consensus 154 ~v~~~~--~~~--iP~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~ 227 (345)
.++.+. +++ +|++++++ ++|++++++.|||+++.+..++++|++|+|+|+ |++|++++|+|+++|+ +|+++++
T Consensus 113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~ 191 (348)
T PLN03154 113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 191 (348)
T ss_pred EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcC
Confidence 998753 544 59999986 688899999999999988889999999999998 9999999999999999 8999999
Q ss_pred ChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce--
Q 019139 228 DPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI-- 304 (345)
Q Consensus 228 ~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-- 304 (345)
++++.+.++ ++|++.++++.+. .++.+.+.+.+++++|++||++|+. .+..++++++++ |+++.+|..... .+
T Consensus 192 ~~~k~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~ 267 (348)
T PLN03154 192 SSQKVDLLKNKLGFDEAFNYKEE-PDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLN-SLSA 267 (348)
T ss_pred CHHHHHHHHHhcCCCEEEECCCc-ccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccC-CCCC
Confidence 999999887 7999999998641 3566777777666899999999975 599999999997 999999975422 22
Q ss_pred ---ecChhhhcc-ccEEEEeeecCCc--ccccHHHHHHHHhcccc
Q 019139 305 ---STRPFQLVT-GRVWKGTAFGGFK--SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 305 ---~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~ 343 (345)
.+++..++. ++++.|++.+.+. ..+.+.++++++++|+.
T Consensus 268 ~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l 312 (348)
T PLN03154 268 SQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI 312 (348)
T ss_pred CCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 134555665 9999998765432 12457788899988865
No 79
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=8.6e-35 Score=273.32 Aligned_cols=298 Identities=27% Similarity=0.421 Sum_probs=237.4
Q ss_pred eeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-CCCCC--CCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 019139 14 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (345)
Q Consensus 14 ~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~--~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~ 90 (345)
++++.++ +.+++.|.|+++++||+||+.++++|++|+.... +..+. ...|.++|+|++|+|+++|++++.|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4566665 9999999999999999999999999999987763 33321 235789999999999999999999999999
Q ss_pred EEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChh
Q 019139 91 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 170 (345)
Q Consensus 91 V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 170 (345)
|+..+...|+.|.+|..|+.+.|.+.... |....+ .+..|+|++|++++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccce---eecccc--------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 99999999999999999999999986431 110000 0123599999999999999999999999
Q ss_pred hhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC
Q 019139 171 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (345)
Q Consensus 171 ~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~ 250 (345)
+|+. ..++.+||+++...... ++++|+|.|+|.+|++++|+|+.+|+.+++++++++++.++++++|+++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 9876 56888999988665556 8999999888999999999999999867889888899888999999999888765
Q ss_pred ccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccc
Q 019139 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRS 329 (345)
Q Consensus 251 ~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~ 329 (345)
.++. ... ...+++|+++|+.|+...+...+++|+++ |+++.+|... ....+++..++. ++++.++.. ..+
T Consensus 220 ~~~~-~~~-~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~ 290 (339)
T cd08232 220 DPLA-AYA-ADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR----FDD 290 (339)
T ss_pred hhhh-hhh-ccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec----CHH
Confidence 2221 111 11236999999999766689999999997 9999998643 234455555554 888888752 235
Q ss_pred cHHHHHHHHhccc
Q 019139 330 QVPWLVDKYMKKV 342 (345)
Q Consensus 330 ~~~~~~~~~~~g~ 342 (345)
+++++++++++++
T Consensus 291 ~~~~~~~~~~~~~ 303 (339)
T cd08232 291 EFAEAVRLLAAGR 303 (339)
T ss_pred HHHHHHHHHHcCC
Confidence 6788888887775
No 80
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=4.2e-35 Score=275.59 Aligned_cols=279 Identities=22% Similarity=0.278 Sum_probs=222.6
Q ss_pred eeeeeeeccCCC-CeEEEEeec----CCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcce--eEEEEEeCC
Q 019139 9 TCKAAVAWEPNK-PLVIEDVQV----APPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEA--AGIVESVGE 80 (345)
Q Consensus 9 ~~~a~~~~~~~~-~~~~~~~~~----p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~Vv~~G~ 80 (345)
-+|+++...++. .+++.+.+. |+|++|||||||.|++||+.|+..+.|..+. ...|+++|++. .|++..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 467777655554 389999988 8899999999999999999999988885433 24678899754 455556788
Q ss_pred CCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec-ce
Q 019139 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VS 159 (345)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~ 159 (345)
.++.|++||+|+.. |+|+||+++|. ..
T Consensus 87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~ 114 (338)
T cd08295 87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD 114 (338)
T ss_pred CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence 88899999999721 28999999999 79
Q ss_pred EEEcC-CCCChh-hhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 019139 160 VAKID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (345)
Q Consensus 160 ~~~iP-~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~ 236 (345)
++++| +++++. +++++++++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK 193 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99995 678887 788999999999999888889999999999998 9999999999999999 8999999999999998
Q ss_pred h-cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCc----eecChhhh
Q 019139 237 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE----ISTRPFQL 311 (345)
Q Consensus 237 ~-~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~----~~~~~~~~ 311 (345)
+ +|++.++++.+. .++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|....... ..++...+
T Consensus 194 ~~lGa~~vi~~~~~-~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~ 270 (338)
T cd08295 194 NKLGFDDAFNYKEE-PDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNI 270 (338)
T ss_pred HhcCCceeEEcCCc-ccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHH
Confidence 8 999999986541 356677777765699999999998 5589999999997 99999997432111 01233444
Q ss_pred cc-ccEEEEeeecCCcc--cccHHHHHHHHhcccc
Q 019139 312 VT-GRVWKGTAFGGFKS--RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 312 ~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~~ 343 (345)
+. ++++.|+....+.. .+.+.++++++++|+.
T Consensus 271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l 305 (338)
T cd08295 271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKL 305 (338)
T ss_pred hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCe
Confidence 44 88999876654322 2346778888887753
No 81
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.5e-34 Score=270.46 Aligned_cols=296 Identities=27% Similarity=0.375 Sum_probs=240.6
Q ss_pred ccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEE
Q 019139 16 WEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 92 (345)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~ 92 (345)
++++.++++++.|.|.|.++||+||+.++++|+.|...+.+.. ...++|.++|+|++|+|+++|++++.+++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 4677789999999999999999999999999999998765532 1224577899999999999999999999999999
Q ss_pred ecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhh
Q 019139 93 PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 172 (345)
Q Consensus 93 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a 172 (345)
..+...|+.|..|..+..+.|++... .|+. . .|+|++|++++.+.++++|+++++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVD-T------------------DGCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---Eeec-C------------------CCcceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999998743 2221 2 249999999999999999999998654
Q ss_pred cccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCcc
Q 019139 173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252 (345)
Q Consensus 173 a~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 252 (345)
+++.++.+|++++ ....+++++|+|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.+++..+ .+
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~ 217 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--ED 217 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cC
Confidence 5667888998876 345678999999888999999999999999944888888889999999999988888765 56
Q ss_pred HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChh-hhcc-ccEEEEeeecCCcccc
Q 019139 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVT-GRVWKGTAFGGFKSRS 329 (345)
Q Consensus 253 ~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~-~~~i~g~~~~~~~~~~ 329 (345)
+.+.+.++.++ ++|++||++|+...+...+++|+++ |+++.+|..... .+++.. .+.. ++++.++.. ....+
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~ 292 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGK--VTIDFTNKVIFKGLTIYGITG--RHMFE 292 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCC--cccchhhhhhhcceEEEEEec--CCchh
Confidence 77778777766 8999999999877789999999997 999999975322 233222 3344 778877652 22235
Q ss_pred cHHHHHHHHhcccc
Q 019139 330 QVPWLVDKYMKKVN 343 (345)
Q Consensus 330 ~~~~~~~~~~~g~~ 343 (345)
.+.++++++++++.
T Consensus 293 ~~~~~~~~l~~~~l 306 (340)
T TIGR00692 293 TWYTVSRLIQSGKL 306 (340)
T ss_pred hHHHHHHHHHcCCC
Confidence 56778888877753
No 82
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1e-34 Score=271.48 Aligned_cols=260 Identities=19% Similarity=0.240 Sum_probs=209.9
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCC
Q 019139 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRE 101 (345)
Q Consensus 22 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~ 101 (345)
+++.++|.|+|++|||||||.|+++|+.|. .|.++....|.++|.|++|+|++.|+ .|++||+|+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 888999999999999999999999999654 34333333578999999999999774 59999999731
Q ss_pred CccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc----CCCCChhhh-cccc
Q 019139 102 CKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLLG 176 (345)
Q Consensus 102 c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i----P~~l~~~~a-a~~~ 176 (345)
++|++|+.++.+.+.++ |++++++++ ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 16899999999888877 899999987 6788
Q ss_pred cchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHH
Q 019139 177 CGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255 (345)
Q Consensus 177 ~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 255 (345)
+++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.++++++. ..+.+
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~ 198 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEE 198 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHH
Confidence 999999999888899999999999996 9999999999999999 89999999999999999999999988652 24555
Q ss_pred HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC---Ccee--cChhhhcc-ccEEEEeeecCCc---
Q 019139 256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---QEIS--TRPFQLVT-GRVWKGTAFGGFK--- 326 (345)
Q Consensus 256 ~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---~~~~--~~~~~~~~-~~~i~g~~~~~~~--- 326 (345)
.+...+++++|++||++|+.. +..++++++++ |+++.+|..... ...+ ..+..+.. ++++.++....+.
T Consensus 199 ~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 199 TLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 565555558999999999865 79999999997 999999974321 1122 12333444 8899888754332
Q ss_pred ccccHHHHHHHHhcccc
Q 019139 327 SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 327 ~~~~~~~~~~~~~~g~~ 343 (345)
..+.+.++++++++|+.
T Consensus 277 ~~~~~~~~~~l~~~g~l 293 (325)
T TIGR02825 277 RQKALKELLKWVLEGKI 293 (325)
T ss_pred hHHHHHHHHHHHHCCCc
Confidence 12467888888888764
No 83
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.3e-34 Score=270.64 Aligned_cols=272 Identities=19% Similarity=0.207 Sum_probs=217.5
Q ss_pred eeeeeeeccC--CCC----eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139 9 TCKAAVAWEP--NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (345)
Q Consensus 9 ~~~a~~~~~~--~~~----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v 82 (345)
+||+|++.++ +.+ ++++++|.|+|++|||+|||.+++||+.|...... ...+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 5899999983 333 88899999999999999999999999887653221 124688999999999995 44
Q ss_pred CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc---e
Q 019139 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV---S 159 (345)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~ 159 (345)
+.|++||+|+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999731 178999999999 9
Q ss_pred EEEcCCCCCh-----hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 019139 160 VAKIDPQAPL-----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (345)
Q Consensus 160 ~~~iP~~l~~-----~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~ 233 (345)
++++|++++. ..++++++++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 9999999982 2234678899999999888899999999999986 9999999999999999 8999999999999
Q ss_pred HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCc-----eecCh
Q 019139 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-----ISTRP 308 (345)
Q Consensus 234 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~-----~~~~~ 308 (345)
+++++|+++++++++ .++.+.+.+++++++|++||++|+ ..+..++++++++ |+++.+|....... .....
T Consensus 183 ~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 258 (329)
T cd08294 183 WLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ 258 (329)
T ss_pred HHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence 999999999999876 567777877776689999999998 5589999999997 99999986321111 12223
Q ss_pred hhhcc-ccEEEEeeecCCc--ccccHHHHHHHHhcccc
Q 019139 309 FQLVT-GRVWKGTAFGGFK--SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 309 ~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~ 343 (345)
..++. ++++.++....+. ..+.+.++++++++|++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i 296 (329)
T cd08294 259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKL 296 (329)
T ss_pred HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCC
Confidence 33444 8899987654331 12346677888887764
No 84
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.3e-34 Score=271.41 Aligned_cols=290 Identities=25% Similarity=0.277 Sum_probs=230.8
Q ss_pred eeeeeeccCCCC--eEEEE-eecCCCCCCeEEEEEeeeecCccccccccCCCC--------------------CCCCCcc
Q 019139 10 CKAAVAWEPNKP--LVIED-VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------EGLFPCI 66 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 66 (345)
|||+++.+++.+ +.+.+ ++.|+|.+++|+|||.++++|++|++...|.++ ..++|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888876643 55543 577788999999999999999999998877543 2356889
Q ss_pred cCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCc
Q 019139 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 146 (345)
Q Consensus 67 ~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 146 (345)
+|||++|+|+++|+++++|++||+|+..+...|+.|..|. .|.. .|.. .+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~~------~~~~-~~------------------ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DIDY------IGSE-RD------------------ 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----cccc------cCCC-CC------------------
Confidence 9999999999999999999999999987777776665432 1211 1110 12
Q ss_pred ceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 019139 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (345)
Q Consensus 147 g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~ 225 (345)
|+|++|+.++.+.++++|+++++.+++++++++.+||+++ ...+++++++|+|+|+ |++|++++++|+++|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 3999999999999999999999999999999999999987 7788999999999998 9999999999999999 78888
Q ss_pred cCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce
Q 019139 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 304 (345)
Q Consensus 226 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~ 304 (345)
+.++ +.+.++++|++.+++..+ ....+ ...+.+ ++|++||++|+. .+..++++++++ |+++.+|... ....
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~-~~~~ 280 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGGP-LFPDLLRLLRPG-GRYVTAGAIA-GPVV 280 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCHH-HHHHHHHHhccC-CEEEEecccC-Cccc
Confidence 7665 788889999975554433 33333 445555 899999999985 489999999997 9999999642 2235
Q ss_pred ecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139 305 STRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 305 ~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~ 342 (345)
++++..++. ++++.|+.... .+.+.++++++.+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~ 316 (350)
T cd08274 281 ELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGE 316 (350)
T ss_pred cCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCC
Confidence 677777566 99999987643 367888888888775
No 85
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3e-34 Score=270.27 Aligned_cols=221 Identities=20% Similarity=0.287 Sum_probs=187.8
Q ss_pred eEEEEeecCCCC-CCeEEEEEeeeecCcccccccc---CCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcC
Q 019139 22 LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWS---GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 97 (345)
Q Consensus 22 ~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~---g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~ 97 (345)
++++++|.|+|. +|||||||.|+|||+.|..... +.....++|.++|||++|+|+++|++++.|++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 888999999874 9999999999999999864332 2111234678999999999999999999999999997310
Q ss_pred CCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhh----hc
Q 019139 98 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VC 173 (345)
Q Consensus 98 ~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~----aa 173 (345)
++|+||+++|.+.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 2799999999999999999864432 44
Q ss_pred ccccchhhhhHHHHhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCC
Q 019139 174 LLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH 249 (345)
Q Consensus 174 ~~~~~~~ta~~al~~~~~~~~g--~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~ 249 (345)
+++.++.|||+++.+..+++++ ++|+|+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|++.++++.+
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 5677899999998778888876 99999998 9999999999999998569999999999998876 99999998876
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.++.+.+.+++++++|++||++|+.. +..++++|+++ |+++.+|.
T Consensus 211 -~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~ 255 (345)
T cd08293 211 -DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQ 255 (345)
T ss_pred -CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEee
Confidence 56778888877668999999999865 79999999997 99999985
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=3e-34 Score=269.71 Aligned_cols=282 Identities=24% Similarity=0.317 Sum_probs=231.1
Q ss_pred eeeeeeccCCCC---eEEEEeecCCCCC-CeEEEEEeeeecCccccccccCCCCCC-C----CCcccCcceeEEEEEeCC
Q 019139 10 CKAAVAWEPNKP---LVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDPEG-L----FPCILGHEAAGIVESVGE 80 (345)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~Vv~~G~ 80 (345)
|||+++.+++.+ +.+++.|.|+|.+ +||+||+.++|+|+.|...+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999988875 8999999999888 999999999999999999988876432 2 677999999999999999
Q ss_pred CCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceE
Q 019139 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (345)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 160 (345)
+++.+++||+|+.... . .|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------~------------------~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------G------------------LGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------C------------------CccchheEeccHHHe
Confidence 9999999999985321 0 138999999999999
Q ss_pred EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHH
Q 019139 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA 235 (345)
Q Consensus 161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~----~~~~~~ 235 (345)
+++|+++++++++.+++++.|||+++.....++++++|+|+|+ |++|++++|+|++.|+ +++++.+++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999877788999999999987 9999999999999999 677776665 677888
Q ss_pred HhcCCceEeCCCCC-CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-
Q 019139 236 KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT- 313 (345)
Q Consensus 236 ~~~g~~~~i~~~~~-~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~- 313 (345)
+++|++.++++.+. ..++.+.+..+.++++|++||++|+.. +...+++++++ |+++.+|.... ....+++..++.
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~ 268 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLLIFK 268 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHHhhC
Confidence 89999999887651 015666677666558999999999865 77889999997 99999986432 244566655455
Q ss_pred ccEEEEeeecCCcc---c----ccHHHHHHHHhcccc
Q 019139 314 GRVWKGTAFGGFKS---R----SQVPWLVDKYMKKVN 343 (345)
Q Consensus 314 ~~~i~g~~~~~~~~---~----~~~~~~~~~~~~g~~ 343 (345)
++++.++....... . ..+.++++++.+|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (341)
T cd08290 269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKL 305 (341)
T ss_pred CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCc
Confidence 99999987654321 1 246777788877653
No 87
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=3.8e-34 Score=268.39 Aligned_cols=276 Identities=18% Similarity=0.209 Sum_probs=223.1
Q ss_pred eeeeeccC---CCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 019139 11 KAAVAWEP---NKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (345)
Q Consensus 11 ~a~~~~~~---~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~ 85 (345)
||+++.++ +.+ +++.++|.|+|+++||+|||.++++|+.|...+.|..+...+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57777775 443 7788899999999999999999999999999888866555678899999999999999999999
Q ss_pred CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (345)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (345)
++||+|+.... .. .. |+|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~---------------------------~~-~~------------------g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD---------------------------ID-RP------------------GSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC---------------------------CC-CC------------------CcccceEEEcHHHcccCCC
Confidence 99999974210 00 12 4899999999999999999
Q ss_pred CCChhhhcccccchhhhhHHHHhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhc
Q 019139 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 238 (345)
Q Consensus 166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~-----g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~ 238 (345)
++++++++.+++++.|||+++....++++ +++|+|+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999878888877 999999987 99999999999998 99 899999999999999999
Q ss_pred CCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE
Q 019139 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW 317 (345)
Q Consensus 239 g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i 317 (345)
|+++++++.. ++.+.+.+..++++|+++|++++...+...+++++++ |+++.++.. ..+++..+.. ++++
T Consensus 194 g~~~~~~~~~---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~~ 264 (336)
T TIGR02817 194 GAHHVIDHSK---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSISL 264 (336)
T ss_pred CCCEEEECCC---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceEE
Confidence 9999987643 4666666654448999999987767789999999997 999988532 2344444444 5777
Q ss_pred EEeeecC--Ccc-------cccHHHHHHHHhccc
Q 019139 318 KGTAFGG--FKS-------RSQVPWLVDKYMKKV 342 (345)
Q Consensus 318 ~g~~~~~--~~~-------~~~~~~~~~~~~~g~ 342 (345)
.+..+.. ... ...+.++++++.+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 298 (336)
T TIGR02817 265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGK 298 (336)
T ss_pred EEEEeecccccchhhhhhhHHHHHHHHHHHHCCC
Confidence 7644331 111 133677778887765
No 88
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=3.1e-33 Score=253.24 Aligned_cols=268 Identities=32% Similarity=0.473 Sum_probs=222.1
Q ss_pred eEEEEEeeeecCccccccccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCC
Q 019139 36 EVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (345)
Q Consensus 36 eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~ 114 (345)
||+||+.++++|+.|+..+.|..+ ....|.++|+|++|+|+++|++++.|++||+|+..+...|+.|.+|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999988765 345688999999999999999999999999999999999999999997 665
Q ss_pred CcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCC
Q 019139 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (345)
Q Consensus 115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~ 194 (345)
..... +. ...|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.....+++
T Consensus 77 ~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGIL---GE-------------------GLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCEe---cc-------------------ccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 44321 11 112499999999999999999999999999999999999999877777799
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g 273 (345)
+++|+|+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+ .+..+.+. ...+ ++|+++|+++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCC
Confidence 9999999996699999999999998 8999999999999999999988887765 44555555 4444 8999999999
Q ss_pred CHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHH
Q 019139 274 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKY 338 (345)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~ 338 (345)
+......++++++++ |+++.+|.......... ...++. ++++.|+..+.+ .+++++++++
T Consensus 211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 271 (271)
T cd05188 211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDD-LRRLLFKELTIIGSTGGTR---EDFEEALDLL 271 (271)
T ss_pred CHHHHHHHHHhcccC-CEEEEEccCCCCCCccc-HHHHHhcceEEEEeecCCH---HHHHHHHhhC
Confidence 855689999999997 99999997543322222 333444 999999987644 5777777653
No 89
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=3.9e-33 Score=260.73 Aligned_cols=238 Identities=26% Similarity=0.345 Sum_probs=210.9
Q ss_pred eeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
+||++++.+++.+ +++++++.|.|.++||+||+.++|+|++|+....|.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 4899999987764 88899999999999999999999999999999888776555788999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+.... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS------------------------------A------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC------------------------------C------------------CcceeeEEEcCHHHceeCCCC
Confidence 9999973210 1 138999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+++++++.+++++.+||.++.+..++.++++|+|+|+ |.+|++++|+|+.+|+ +|++++.++++.+.++++|++.+++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999988899999998877888999999999976 9999999999999999 7999999999999999999988888
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
.++ .++.+.+.+++++ ++|++||++|+. .+...+++++++ |+++.+|...
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~ 242 (327)
T PRK10754 192 YRE--ENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR-GLMVSFGNAS 242 (327)
T ss_pred CCC--CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC-CEEEEEccCC
Confidence 765 5677788888887 899999999985 488899999997 9999999753
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1e-32 Score=257.03 Aligned_cols=279 Identities=24% Similarity=0.277 Sum_probs=229.3
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccCcceeEEEEEeCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
|||+++.+++.+ +++.+.+.|.+.++||+||+.++++|+.|+....|..+. ...|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999876653 667777777789999999999999999999988876532 356789999999999999999999
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
+++||+|+.... . .+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~-~~------------------g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG----------------------------R-AG------------------GGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC----------------------------C-CC------------------ceeeEEEEEchHHeEeCC
Confidence 999999985320 0 12 399999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~ 243 (345)
+++++.+++++++++.||| ++....+++++++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 5667888999999999996 9999999999999999 89999999999999999999888
Q ss_pred eCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA 321 (345)
Q Consensus 244 i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 321 (345)
++..+ .++.+.+.++.++ ++|+++|++|+.. ....+++++++ |+++.+|.... ....+++..++. ++++.++.
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 192 VDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASG-EWTALDEDDARRRGVTVVGLL 266 (324)
T ss_pred EecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCC-CCCccCHHHHhhCCcEEEEee
Confidence 88765 4667777777776 8999999999876 68999999997 99999997543 233556445455 99999887
Q ss_pred ecCCcc---cccHHHHHHHHhccc
Q 019139 322 FGGFKS---RSQVPWLVDKYMKKV 342 (345)
Q Consensus 322 ~~~~~~---~~~~~~~~~~~~~g~ 342 (345)
...... .+.+.++++++.+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~~ 290 (324)
T cd08244 267 GVQAERGGLRALEARALAEAAAGR 290 (324)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCC
Confidence 654321 244566777777664
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=9.1e-33 Score=258.34 Aligned_cols=279 Identities=20% Similarity=0.245 Sum_probs=229.6
Q ss_pred eeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCC
Q 019139 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (345)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~ 85 (345)
+|||+++.+++.. +++.+.+.|++.++||+|||.++++|+.|.....|.++. ...|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 5999999988753 677788888889999999999999999999988876543 3456799999999999999999999
Q ss_pred CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (345)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (345)
++||+|+... .+ |+|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------PG------------------GGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------CC------------------CceeeEEEecHHHcEeCCC
Confidence 9999997421 11 3899999999999999999
Q ss_pred CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
++++.+++.+++++.+||+++.....++++++|+|+|+ |++|++++++|+++|+ .++.+++++++.+.++++|++.++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999877788999999999997 9999999999999999 677788899999999999998888
Q ss_pred CCCCCCcc-HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCcee-cChhhhcc-ccEEEEe
Q 019139 245 NPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGT 320 (345)
Q Consensus 245 ~~~~~~~~-~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~~i~g~ 320 (345)
+... .+ +.+.+.+.+++ ++|++||++++. .+..++++++++ |+++.+|...+ ..+. +++..++. ++++.++
T Consensus 191 ~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (334)
T PTZ00354 191 RYPD--EEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFS 265 (334)
T ss_pred ecCC--hhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEee
Confidence 8765 33 66777777766 899999999874 588999999997 99999997532 3333 66666666 7799998
Q ss_pred eecCCccc-------ccHHHHHHHHhccc
Q 019139 321 AFGGFKSR-------SQVPWLVDKYMKKV 342 (345)
Q Consensus 321 ~~~~~~~~-------~~~~~~~~~~~~g~ 342 (345)
........ +.+.+++++++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (334)
T PTZ00354 266 TLRSRSDEYKADLVASFEREVLPYMEEGE 294 (334)
T ss_pred eccccchhhhHHHHHHHHHHHHHHHHCCC
Confidence 76542110 22356667776664
No 92
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.6e-32 Score=255.30 Aligned_cols=297 Identities=26% Similarity=0.356 Sum_probs=240.2
Q ss_pred eeeeeeccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~--~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++...+ +.+++++.+.|.++++||+||+.++++|++|+....|.++.. ..|.++|||++|+|+++|+.+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899999765 348888888888999999999999999999999888776432 4688999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+......|+.|. .+.|.... +.|. +..|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~------~~~~~~~~---~~~~-------------------~~~g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGP------PTAEDEAS---ALGG-------------------PIDGVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEeccccccccc------cccccccc---cccc-------------------ccCceeeeEEEecHHHeEECCCC
Confidence 99999976554444333 33443221 1121 11248999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
+++.+++.+++++.+||+++.....++++++|+|+|+|++|++++++|++.|+ +|++++.++++.+.++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999998777889999999999889999999999999999 79999999999999988999988886
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG 324 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 324 (345)
... .++.+.+.+++++ ++|+++|++++. .+..++++++++ |+++.+|..... ...++...++. ++++.++..+.
T Consensus 212 ~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 212 RTT-PDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred Ccc-cCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecCc
Confidence 541 3566778888876 999999999864 488999999997 999999975432 23455556556 99999987654
Q ss_pred CcccccHHHHHHHHhccc
Q 019139 325 FKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~ 342 (345)
.+.+.++++++.++.
T Consensus 288 ---~~~~~~~~~l~~~~~ 302 (336)
T cd08276 288 ---RAQFEAMNRAIEAHR 302 (336)
T ss_pred ---HHHHHHHHHHHHcCC
Confidence 356777777776553
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=9.6e-33 Score=258.19 Aligned_cols=277 Identities=24% Similarity=0.287 Sum_probs=226.1
Q ss_pred eeeeeeeccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139 9 TCKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (345)
Q Consensus 9 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~ 83 (345)
+|||+++.+++. ++++++++.|.|.++||+||+.++++|+.|++...|.++. ..+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 489999998765 4889999999999999999999999999999988887643 36788999999999999999999
Q ss_pred CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (345)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 163 (345)
.+++||+|+.. . .|+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~--------------------------------~------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATM--------------------------------S------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEe--------------------------------c------------------CcceeEEEEechHHeEEC
Confidence 99999999842 1 138999999999999999
Q ss_pred CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (345)
Q Consensus 164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~ 242 (345)
|++ ..+++.+++++.+||+++.+..+++++++|+|+|+ |.+|++++|+|+..|+ +|+++++++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677888899999999877788999999999997 9999999999999999 7999889999999999999988
Q ss_pred EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC---------CceecChhhhcc
Q 019139 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---------QEISTRPFQLVT 313 (345)
Q Consensus 243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---------~~~~~~~~~~~~ 313 (345)
+++..+ .++.+.+....++++|++||++|+ ..+...+++++++ |+++.+|..... ....+++..+..
T Consensus 188 v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 188 PINYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred EEeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 887655 455566665554589999999997 4589999999997 999999875321 112233333334
Q ss_pred ccEEEEeeecCCc--ccccHHHHHHHHhccc
Q 019139 314 GRVWKGTAFGGFK--SRSQVPWLVDKYMKKV 342 (345)
Q Consensus 314 ~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~ 342 (345)
++++.++.+..+. ..+.+.++++++.++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (329)
T cd08250 264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGK 294 (329)
T ss_pred CceEEEEEhHHHHHHHHHHHHHHHHHHHCCC
Confidence 8999998754332 1244667777777664
No 94
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=5.3e-32 Score=252.38 Aligned_cols=263 Identities=22% Similarity=0.262 Sum_probs=213.3
Q ss_pred eeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++.+++. ++++++.|.|+|+++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 78999999886 6999999999999999999999999999999998887643 245789999999999998 456899
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+.... ..|+ +..|+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~-------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGM-------------------NTDGGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence 9999985321 0111 11249999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcC--CC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAK--VE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~--~~-~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~ 242 (345)
+++.+++.+++++.+||.++....+ +. .+++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 9999999999999999998754433 35 3579999998 9999999999999999 7999999999999999999998
Q ss_pred EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA 321 (345)
Q Consensus 243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 321 (345)
+++.++ . ..+.......+++|++||++|+. .+...+++++++ |+++.+|.... .+..+++..++. ++++.++.
T Consensus 195 ~~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd05280 195 VLDRED--L-LDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYG-GVVASCGNAAG-PELTTTVLPFILRGVSLLGID 268 (325)
T ss_pred EEcchh--H-HHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCC-CEEEEEecCCC-CccccccchheeeeeEEEEEE
Confidence 887654 1 11222223334899999999985 599999999997 99999997532 233566666644 99999987
Q ss_pred ecC
Q 019139 322 FGG 324 (345)
Q Consensus 322 ~~~ 324 (345)
...
T Consensus 269 ~~~ 271 (325)
T cd05280 269 SVN 271 (325)
T ss_pred eec
Confidence 654
No 95
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=5.8e-32 Score=253.51 Aligned_cols=278 Identities=19% Similarity=0.183 Sum_probs=226.8
Q ss_pred eeeeeeccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139 10 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 10 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
|||+++++++++ ++.+++|.|++.+++|+||+.++++|+.|+..+.+..+...+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 579999988763 666778888889999999999999999999988776654456779999999999999999999
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
+++||+|+..... ..+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~----------------------------~~~------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGDI----------------------------TRP------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCCC----------------------------CCC------------------ccceEEEEEchHHeeeCC
Confidence 9999999842110 012 389999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN 237 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~-----g~~VlI~Ga-g~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~ 237 (345)
+++++.+++.+++++.+||+++.+...+.+ +++|+|+|+ |++|++++|+|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998877788877 999999986 999999999999999 7 89999999999999999
Q ss_pred cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV 316 (345)
Q Consensus 238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~ 316 (345)
+|++.+++..+ ++.+.+.....+++|++||++|+...+..++++++++ |+++.+|... ..+++..++. +++
T Consensus 194 ~g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~ 265 (336)
T cd08252 194 LGADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSAS 265 (336)
T ss_pred cCCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcccce
Confidence 99988887653 3555555443348999999999766799999999997 9999998642 3445555544 888
Q ss_pred EEEeeecCCc--c-------cccHHHHHHHHhccc
Q 019139 317 WKGTAFGGFK--S-------RSQVPWLVDKYMKKV 342 (345)
Q Consensus 317 i~g~~~~~~~--~-------~~~~~~~~~~~~~g~ 342 (345)
+.++.+.... . .+.+.++++++.+|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (336)
T cd08252 266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGK 300 (336)
T ss_pred EEEEEeeccccccccchhhHHHHHHHHHHHHHCCC
Confidence 8887654321 1 133667788887775
No 96
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=7.5e-32 Score=253.63 Aligned_cols=243 Identities=28% Similarity=0.360 Sum_probs=205.8
Q ss_pred eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
|||+++.+++ ..+++++++.|+|+++||+||+.++++|++|+....+.. ....|.++|+|++|+|+.+|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899999885 348899999999999999999999999999998876554 22356799999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|+......|+ + ....|+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence 999865432111 0 01124999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKV----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~----------~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~ 237 (345)
+.+++.+++++.+||+++.+..++ .++++|+|+|+ |++|++++++|+.+|+ +|+++. ++++.+.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999988665544 78999999998 9999999999999999 788876 4588888899
Q ss_pred cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhcc--CCeEEEEeccCC
Q 019139 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK--GWGTSVIVGVAA 299 (345)
Q Consensus 238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~--~~G~~v~~G~~~ 299 (345)
+|++.+++..+ .++.+.+.+++++++|++||++|++..+..+++++++ + |+++.+|...
T Consensus 197 ~g~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~ 257 (339)
T cd08249 197 LGADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVP 257 (339)
T ss_pred cCCCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCC
Confidence 99999988865 5677777777766899999999985669999999999 9 9999998753
No 97
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.7e-31 Score=247.58 Aligned_cols=269 Identities=24% Similarity=0.287 Sum_probs=218.7
Q ss_pred ccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccc-cCCCCC--CCCCcccCcceeEEEEEeCCCCCCCCCCCEEE
Q 019139 16 WEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 92 (345)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~ 92 (345)
++++. +++++++.|++.++||+||+.++++|+.|...+ .|..+. +..|.++|+|++|+|+++|++++.+++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34444 999999999999999999999999999999887 665422 23478999999999999999999999999998
Q ss_pred ecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhh
Q 019139 93 PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 172 (345)
Q Consensus 93 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a 172 (345)
... .|+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence 431 1389999999999999999998 233
Q ss_pred cccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCcc
Q 019139 173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252 (345)
Q Consensus 173 a~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 252 (345)
+....++.++++++. ..+++++++|+|+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.+++.+. .+
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~ 185 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EA 185 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cC
Confidence 322367888998874 788899999999988999999999999999943999999999999999999988887654 56
Q ss_pred HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC-cccc
Q 019139 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF-KSRS 329 (345)
Q Consensus 253 ~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~-~~~~ 329 (345)
+.+.+.+++.+ ++|+++|++|+.......+++++++ |+++.+|... .....+++..+.. ++++.++..... ...+
T Consensus 186 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (312)
T cd08269 186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLE 263 (312)
T ss_pred HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhh
Confidence 77788888776 9999999998877789999999997 9999999753 3345556555555 888887754332 2236
Q ss_pred cHHHHHHHHhccc
Q 019139 330 QVPWLVDKYMKKV 342 (345)
Q Consensus 330 ~~~~~~~~~~~g~ 342 (345)
.+.++++++++++
T Consensus 264 ~~~~~~~~~~~~~ 276 (312)
T cd08269 264 GMREAVKLIADGR 276 (312)
T ss_pred HHHHHHHHHHcCC
Confidence 7888888888775
No 98
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-31 Score=247.42 Aligned_cols=266 Identities=21% Similarity=0.221 Sum_probs=216.0
Q ss_pred eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
||++++.+++ ..+++++.|.|.+.++||+||+.++++|+.|.+...+. ..|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 6889988754 12667788999999999999999999999999876521 235789999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|+... .+ |+|++|+.++.+.++++|++++
T Consensus 77 d~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~~ 107 (305)
T cd08270 77 ARVVGLG-------------------------------AM------------------GAWAELVAVPTGWLAVLPDGVS 107 (305)
T ss_pred CEEEEec-------------------------------CC------------------cceeeEEEEchHHeEECCCCCC
Confidence 9997421 12 3999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
+.+++++++++.+||+++...... ++++|+|+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++..++..
T Consensus 108 ~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 185 (305)
T cd08270 108 FAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG 185 (305)
T ss_pred HHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc
Confidence 999999999999999988665555 5999999998 9999999999999999 899999999999999999987655432
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc---ccEEEEeeecC
Q 019139 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT---GRVWKGTAFGG 324 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~---~~~i~g~~~~~ 324 (345)
+ ++.++++|+++|++|+.. ....+++++++ |+++.+|... .....+++..+.. ++++.++.+..
T Consensus 186 ~----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (305)
T cd08270 186 S----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYD 252 (305)
T ss_pred c----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccC
Confidence 2 122247999999999864 89999999997 9999999754 3345566666554 88999987664
Q ss_pred -CcccccHHHHHHHHhcccc
Q 019139 325 -FKSRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 325 -~~~~~~~~~~~~~~~~g~~ 343 (345)
....+.+..++++++++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~i 272 (305)
T cd08270 253 GEPLAADLARLLGLVAAGRL 272 (305)
T ss_pred HHHHHHHHHHHHHHHHCCCc
Confidence 1123556777777777654
No 99
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.3e-31 Score=249.44 Aligned_cols=266 Identities=20% Similarity=0.306 Sum_probs=225.3
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCC
Q 019139 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100 (345)
Q Consensus 22 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~ 100 (345)
+.+++.|.|++.+++|+||+.++++|+.|...+.|..+. ...|.++|+|++|+|+++|++++.+++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888899999999999999999999988776543 346789999999999999999999999999985320
Q ss_pred CCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchh
Q 019139 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180 (345)
Q Consensus 101 ~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ 180 (345)
+ |+|++|+.++.+.++++|+++++.+++.++++..
T Consensus 90 ---------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 2 3899999999999999999999999999999999
Q ss_pred hhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHh
Q 019139 181 TGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259 (345)
Q Consensus 181 ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~ 259 (345)
+||+++.....+.++++|+|+|+ |.+|++++|+|+++|+ .++++.+++++.+.++++|++.++++.+ .++.+.+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHH
Confidence 99999888888899999999988 9999999999999999 7888888899999999999999998865 456777888
Q ss_pred hcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc-cccEEEEeeecCCcc-------ccc
Q 019139 260 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS-------RSQ 330 (345)
Q Consensus 260 ~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~ 330 (345)
++.+ ++|++||++|+.. ....+++++++ |+++.+|..... ...+++..+. +++++.++.+..+.. .+.
T Consensus 202 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 202 ATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred HhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 8777 9999999999866 67889999997 999999975432 4566777766 499999988765421 134
Q ss_pred HHHHHHHHhccc
Q 019139 331 VPWLVDKYMKKV 342 (345)
Q Consensus 331 ~~~~~~~~~~g~ 342 (345)
+.++++++.+++
T Consensus 279 ~~~~~~~l~~~~ 290 (323)
T cd05282 279 FAEVIKLVEAGV 290 (323)
T ss_pred HHHHHHHHhCCC
Confidence 666777777765
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.9e-31 Score=246.40 Aligned_cols=280 Identities=25% Similarity=0.388 Sum_probs=222.7
Q ss_pred eeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
||++++...+. .+++.+.+.|.+.++||+||+.++++|+.|+....|..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 67888887664 367778888888999999999999999999999888765556688999999999999995 57999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+..... .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG------------------------MGRT-FD------------------GSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC------------------------CCCC-CC------------------cccceEEEcCHHHcEeCCCCC
Confidence 9999854210 0000 12 499999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
++.+++.+++++.+||+++.....++++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++.+++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999888788999999999998 9999999999999999 79999999999999999999887754
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce-ecChhhhc--c-ccEEEEeee
Q 019139 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI-STRPFQLV--T-GRVWKGTAF 322 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~--~-~~~i~g~~~ 322 (345)
. .++.+.+.++ +.++|+++|++|+. .+...+++++++ |+++.+|........ ......+. . ++++.++..
T Consensus 195 -~--~~~~~~i~~~-~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 195 -D--GAIAEQLRAA-PGGFDKVLELVGTA-TLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred -C--ccHHHHHHHh-CCCceEEEECCChH-HHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 2 3566677777 45999999999984 589999999997 999999974322111 12222222 3 788877754
Q ss_pred cCCcccccHHHHHHHHhccc
Q 019139 323 GGFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~g~ 342 (345)
... ....+.+++++++++.
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~ 287 (320)
T cd08243 269 GDV-PQTPLQELFDFVAAGH 287 (320)
T ss_pred hhh-hHHHHHHHHHHHHCCc
Confidence 322 1235667777776664
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=2.1e-31 Score=248.75 Aligned_cols=261 Identities=20% Similarity=0.257 Sum_probs=209.5
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++.+.+++ +++++.|.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.| ++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789999988764 7889999999999999999999999999987664322 122458899999999999954 46799
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+.... ..|.. .+ |+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSY------------------------DLGVS-HH------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEccc------------------------ccCCC-CC------------------CcceeEEEEcHHHeEECCCC
Confidence 9999985421 01111 22 49999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhh--cC-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNT--AK-VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~--~~-~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~ 242 (345)
+++.+++.+++++.|||.++... .. ...+++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999998877432 22 345789999998 9999999999999999 8999999999999999999988
Q ss_pred EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA 321 (345)
Q Consensus 243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 321 (345)
+++.++ . ..+.+.++.++++|++||++|+ ..+...+++++++ |+++.+|... ....++++..++. ++++.++.
T Consensus 195 v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 195 VIPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred EEcchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEEE
Confidence 888764 2 2445555554489999999998 4589999999997 9999999753 3334555556645 99999975
Q ss_pred e
Q 019139 322 F 322 (345)
Q Consensus 322 ~ 322 (345)
.
T Consensus 269 ~ 269 (326)
T cd08289 269 S 269 (326)
T ss_pred e
Confidence 3
No 102
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.4e-31 Score=246.30 Aligned_cols=260 Identities=24% Similarity=0.286 Sum_probs=209.7
Q ss_pred eeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
||+++...+.+ ++++++|.|.+.++||+||+.++++|++|+..+.|.++. ...|.++|||++|+|+. ++++.|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 67888877663 689999999999999999999999999999988887643 25688999999999998 55678999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+..... .|.. .+ |+|++|+.+|.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVS-HD------------------GGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCC-CC------------------ccceEEEEEchhheEECCCCC
Confidence 9999854310 1110 12 499999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHh--hcCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139 168 PLDKVCLLGCGVPTGLGAVWN--TAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~--~~~~~~g~-~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~ 243 (345)
++.+++.+++.+.+|+.++.. ...+.+++ +|+|+|+ |++|++++|+|+.+|+ ++++++.++++.+.++++|++.+
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 999999999999999877633 33478898 9999998 9999999999999999 78888888888899999999888
Q ss_pred eCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF 322 (345)
Q Consensus 244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 322 (345)
++.++ .+ ..+..+..+++|+++|++|+.. +...+++++++ |+++.+|... ....+++...++. ++++.++..
T Consensus 195 ~~~~~--~~--~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 195 IDRED--LS--PPGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred Ecccc--HH--HHHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEEec
Confidence 87654 22 2344455557999999999864 88999999997 9999999753 3344555455545 999999764
Q ss_pred c
Q 019139 323 G 323 (345)
Q Consensus 323 ~ 323 (345)
.
T Consensus 268 ~ 268 (323)
T TIGR02823 268 V 268 (323)
T ss_pred c
Confidence 3
No 103
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=3e-30 Score=239.01 Aligned_cols=278 Identities=24% Similarity=0.310 Sum_probs=227.8
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++.+.+.+ +++.+.+.|.+.++||+||+.++++|+.|+....|.++. ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 789999876543 777788888889999999999999999999888776543 25678999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL-------------------------------AG------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec-------------------------------CC------------------CceeEEEEcCHHHhccCCCC
Confidence 999997421 11 38999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+++.+++.++.++.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ .++++++++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877788999999999997 9999999999999999 7999999999999999999888877
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
... .++.+.+.+...+ ++|+++|++|+.. +...+++++++ |+++.+|..+. ....+++..++. ++++.++...
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 YRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGG-AKAELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCC-CCCCCchHHHHHhCCeEEEeecc
Confidence 765 4566667666665 8999999999866 88899999997 99999987532 234566666655 9999998765
Q ss_pred CCccc-------ccHHHHHHHHhccc
Q 019139 324 GFKSR-------SQVPWLVDKYMKKV 342 (345)
Q Consensus 324 ~~~~~-------~~~~~~~~~~~~g~ 342 (345)
..... ..+.++++++.+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGR 291 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCC
Confidence 43111 12355666666554
No 104
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.98 E-value=6.1e-31 Score=248.05 Aligned_cols=235 Identities=24% Similarity=0.315 Sum_probs=197.9
Q ss_pred eeeeeeccCCCC---eEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCC---------------CCCCCcccCcc
Q 019139 10 CKAAVAWEPNKP---LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---------------EGLFPCILGHE 70 (345)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 70 (345)
|||+++.+++++ +++++++.|+| .++||+||+.++++|++|.....|... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789998888875 88999999999 499999999999999999998877421 23568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceee
Q 019139 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (345)
Q Consensus 71 ~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 150 (345)
++|+|+++|++++++++||+|+..... +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999853210 1124999
Q ss_pred eeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 019139 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (345)
Q Consensus 151 ~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~----g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~ 225 (345)
+|+.++.+.++++|+++++.+++.+++++.+||+++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999999877777654 999999996 9999999999999999 78887
Q ss_pred cCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 226 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
.++ ++.+.++++|++.+++..+ .++.+.+... +++|++||++|+. .....+++++++ |+++.+|..
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~ 259 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSP 259 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCC
Confidence 655 5778889999988887754 3444444321 3899999999986 589999999997 999999864
No 105
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.98 E-value=5.2e-30 Score=239.06 Aligned_cols=279 Identities=18% Similarity=0.225 Sum_probs=217.0
Q ss_pred eeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++.++|. .++++++|.|.|+++||+||+.++++|+.|...+.|.++. ..+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998775 4889999999999999999999999999999988776532 24578899999999999 7777899
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+..... .| .+..|+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~-------------------~~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG------------------------VG-------------------ERHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc------------------------CC-------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence 99999853210 00 011248999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHH--hhcCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139 167 APLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~--~~~~~~-~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~ 242 (345)
+++++++.+++++++++.++. ...... ++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++.
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999999999887653 223444 6789999998 9999999999999999 7999889999999999999999
Q ss_pred EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA 321 (345)
Q Consensus 243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 321 (345)
++++++ ....+..+..+++|.++|++++. .....+..++.+ |+++.+|... ..++.+++..++. ++++.|+.
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~-g~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 195 IIDRAE----LSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYG-GAVAACGLAG-GADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred EEEcch----hhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCC-CEEEEEEecC-CCCCCcchhhhhccccEEEEEE
Confidence 888764 22245555555789999999974 477888899997 9999999753 2334455555544 99999976
Q ss_pred ecCCcc---cccHHHHHHHHhcc
Q 019139 322 FGGFKS---RSQVPWLVDKYMKK 341 (345)
Q Consensus 322 ~~~~~~---~~~~~~~~~~~~~g 341 (345)
+..... .+.+..+.+++.++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~ 290 (324)
T cd08288 268 SVMAPIERRRAAWARLARDLDPA 290 (324)
T ss_pred eecccchhhHHHHHHHHHHHhcC
Confidence 433221 12344455555554
No 106
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.98 E-value=6.4e-30 Score=237.17 Aligned_cols=263 Identities=27% Similarity=0.381 Sum_probs=219.7
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
||++++..++.+ +.++++|.|.+.+++|+|++.++++|++|+....|..+. ...|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578888876543 778899999999999999999999999999988776542 35788999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+.... |.... .|++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~--------------------------~~~~~------------------~g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNL--------------------------GWGRR------------------QGTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEecc--------------------------ccCCC------------------CcceeeEEEecHHHcEeCCCC
Confidence 9999986431 00001 248999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+++.+++.+++++.+||+++....++.++++++|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877788999999999997 9999999999999999 8999999999999999999988887
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
... .++.+.+.+...+ ++|+++|++++.. ....+++++++ |+++.+|... ....+++..++. +.++.+....
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 196 YRA--EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred CCC--cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeehh
Confidence 765 4566677777665 8999999999865 78889999997 9999999754 234455555445 8888887643
No 107
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.98 E-value=8.9e-30 Score=235.48 Aligned_cols=276 Identities=28% Similarity=0.364 Sum_probs=223.4
Q ss_pred eeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (345)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G 88 (345)
||+.+..++.+ +.+.+.+.|.+.++||+|||.++++|+.|+....+.++. .+|.++|||++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46666655543 666777777789999999999999999999988876643 457789999999999999999999999
Q ss_pred CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (345)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 168 (345)
|+|+... .. |+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------PP------------------GAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------CC------------------CceeEEEEecHHHceeCCCCCC
Confidence 9998421 01 3899999999999999999999
Q ss_pred hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (345)
Q Consensus 169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~ 247 (345)
+.+++.+++...++++++.+..++.++++|+|+|+ |++|++++++|+.+|+ .|++++.++++.+.++++|++.+++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999999999999999888888999999999996 9999999999999999 899999999999999999998888766
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 325 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 325 (345)
+ .++.+.+..++.+ ++|+++|++++. .....+++++++ |+++.+|.... ....+++..+.. ++++.++....+
T Consensus 190 ~--~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 190 D--EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNASG-PVPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred c--hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecCCC-CCCccCHHHHHhcCcEEEEEehhhh
Confidence 5 4566777777766 899999999985 588999999997 99999997432 233455555534 888876654333
Q ss_pred cc-c----ccHHHHHHHHhccc
Q 019139 326 KS-R----SQVPWLVDKYMKKV 342 (345)
Q Consensus 326 ~~-~----~~~~~~~~~~~~g~ 342 (345)
.. . +.+.++++++.+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
T cd05286 265 IATREELLARAAELFDAVASGK 286 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCC
Confidence 21 1 22345667776654
No 108
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=7.2e-30 Score=238.64 Aligned_cols=275 Identities=21% Similarity=0.253 Sum_probs=216.6
Q ss_pred eeeeeeccCC------CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccCcceeEEEEEeCC
Q 019139 10 CKAAVAWEPN------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGE 80 (345)
Q Consensus 10 ~~a~~~~~~~------~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~ 80 (345)
.|||++.+.+ +.++++++|.|++.+++|+||+.++++|+.|.....+.. ++...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 4677776433 128899999999999999999999999998765554432 1112356899999999999996
Q ss_pred CCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec-ce
Q 019139 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VS 159 (345)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~ 159 (345)
. .+++||+|+.. ++|++|+.++. +.
T Consensus 82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~ 107 (329)
T cd05288 82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG 107 (329)
T ss_pred C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence 4 79999999731 17999999999 99
Q ss_pred EEEcCCCCC--hhhhcc-cccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139 160 VAKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (345)
Q Consensus 160 ~~~iP~~l~--~~~aa~-~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~ 235 (345)
++++|++++ +.++++ +++++.+||+++.....+.++++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.+
T Consensus 108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~ 186 (329)
T cd05288 108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL 186 (329)
T ss_pred cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999999995 445555 88899999999877788899999999996 9999999999999999 899999999999999
Q ss_pred Hh-cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce----ecChhh
Q 019139 236 KN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQ 310 (345)
Q Consensus 236 ~~-~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~----~~~~~~ 310 (345)
++ +|++.++++++ .++.+.+.+..++++|++||++|+. .+..++++++++ |+++.+|........ .++...
T Consensus 187 ~~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 262 (329)
T cd05288 187 VEELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN 262 (329)
T ss_pred HhhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence 88 99998888875 4566677777656899999999984 589999999997 999999975432111 123344
Q ss_pred hcc-ccEEEEeeecCCcc--cccHHHHHHHHhcccc
Q 019139 311 LVT-GRVWKGTAFGGFKS--RSQVPWLVDKYMKKVN 343 (345)
Q Consensus 311 ~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~~ 343 (345)
++. ++++.++.+..... .+.+.++++++.+|++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 298 (329)
T cd05288 263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKL 298 (329)
T ss_pred HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCc
Confidence 445 89999887654321 2446777788877753
No 109
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=1.4e-30 Score=242.87 Aligned_cols=222 Identities=31% Similarity=0.489 Sum_probs=183.4
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC----CCCcccCcceeEEEEE---eC-CCCCCCCCCCEEEe
Q 019139 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG----LFPCILGHEAAGIVES---VG-EGVTEVQPGDHVIP 93 (345)
Q Consensus 22 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~~G~Vv~---~G-~~v~~~~~Gd~V~~ 93 (345)
...++.++|.|.+++++|++.++++|+.|+.++.|.+.+. .+|.+++.++.|++.. .| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 5568889999999999999999999999999999988654 4775566665555433 33 22234555555542
Q ss_pred cCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhc
Q 019139 94 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 173 (345)
Q Consensus 94 ~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa 173 (345)
. ...|+|+||+++|...++++|+++++.+||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 122499999999999999999999999999
Q ss_pred ccccchhhhhHHHHhhc------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 174 LLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 174 ~~~~~~~ta~~al~~~~------~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
+++.++.|||.++.... +.++|+.|||+|+ |++|++++|+|+..|+ ..+++.+++++.++++++|+++++|+
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 8999999999987 9999999999999995 56666799999999999999999999
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
++ .++.+.+.+.+++++|+||||+|++. ....+.++... |+...++.
T Consensus 210 ~~--~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~ 256 (347)
T KOG1198|consen 210 KD--ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGL 256 (347)
T ss_pred CC--HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEe
Confidence 98 78889999988449999999999965 77777888875 65444443
No 110
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=9.2e-30 Score=224.38 Aligned_cols=264 Identities=22% Similarity=0.242 Sum_probs=209.4
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeC--CCCCCCCCCCEEEecCcCCC
Q 019139 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG--EGVTEVQPGDHVIPCYQAEC 99 (345)
Q Consensus 22 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G--~~v~~~~~Gd~V~~~~~~~~ 99 (345)
|+++++++|+|++||||+|++|.|+++...- +-...+.--.|.-+|...+|.++... |..+.|++||.|...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRg-rm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRG-RMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHee-cccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence 9999999999999999999999999873221 21112222345666666655554432 567889999999732
Q ss_pred CCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhh--ccccc
Q 019139 100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV--CLLGC 177 (345)
Q Consensus 100 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a--a~~~~ 177 (345)
.+|++|..++.+.+.+++++.-+..+ ..+..
T Consensus 101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 18999999999999999865433222 23667
Q ss_pred chhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCccHHH
Q 019139 178 GVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQ 255 (345)
Q Consensus 178 ~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~ 255 (345)
+..|||.+|.+.++.++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++++ +|.|.++|++. +++.+
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~ 210 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQ 210 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHH
Confidence 89999999999999999999999988 9999999999999999 99999999999999987 99999999998 68999
Q ss_pred HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCC---C-CceecCh-hhhcc-ccEEEEeeecCCc-cc
Q 019139 256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS---G-QEISTRP-FQLVT-GRVWKGTAFGGFK-SR 328 (345)
Q Consensus 256 ~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~---~-~~~~~~~-~~~~~-~~~i~g~~~~~~~-~~ 328 (345)
.+.+..+.|+|+.||++|++. ++..+..|+.. +|++.||.-+. . .+...+. ..++. .++++|+...+.. .+
T Consensus 211 ~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~ 288 (340)
T COG2130 211 ALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQR 288 (340)
T ss_pred HHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhh
Confidence 999999999999999999966 99999999997 99999996431 1 1111222 23344 8999999984332 22
Q ss_pred --ccHHHHHHHHhcccc
Q 019139 329 --SQVPWLVDKYMKKVN 343 (345)
Q Consensus 329 --~~~~~~~~~~~~g~~ 343 (345)
+-.+++..++++|++
T Consensus 289 ~~e~~~~l~~wv~~GKi 305 (340)
T COG2130 289 FPEALRELGGWVKEGKI 305 (340)
T ss_pred hHHHHHHHHHHHHcCce
Confidence 456788889998876
No 111
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.2e-29 Score=235.84 Aligned_cols=278 Identities=24% Similarity=0.317 Sum_probs=224.9
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++.+++.+ +.+++.+.|++.+++|+|++.++++|++|.....+.... ...|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999988765 778888888889999999999999999999988776542 24578999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+.... |+... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~~~------------------~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLGGL------------------QGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcCCC------------------CCceeEEEEecHHHcccCCCC
Confidence 9999985321 00001 248999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+++.+++.++.++.+||+++.+..+++++++++|+|+ |++|++++++|+.+|+ .|++++++ ++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999999999998888899999999999986 9999999999999999 78888887 8888889999988887
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecC
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 324 (345)
... . +.+.+.+.+.+ ++|+++|++++.. +...+++++++ |+++.+|... ..++.... .+++++.++.+..
T Consensus 195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~~-~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDLAPLS-FRNATYSGVFTLL 265 (326)
T ss_pred cch--h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccchhhHh-hhcceEEEEEccc
Confidence 755 4 66777877777 8999999999854 88899999997 9999998642 22333221 2388888876432
Q ss_pred --Cc------ccccHHHHHHHHhccc
Q 019139 325 --FK------SRSQVPWLVDKYMKKV 342 (345)
Q Consensus 325 --~~------~~~~~~~~~~~~~~g~ 342 (345)
.. ..+.+.++++++.+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQ 291 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCC
Confidence 10 1244666777776654
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.9e-29 Score=234.65 Aligned_cols=237 Identities=27% Similarity=0.385 Sum_probs=204.1
Q ss_pred eeeeeeccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 10 ~~a~~~~~~~--~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
|||+++.+++ ..+.+++.|.|++.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999988 35999999999999999999999999999999888776543334778999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+..... . . .|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~---------------------------~-~------------------~~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL---------------------------A-R------------------GGSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC---------------------------C-C------------------CccceeEEEeCHHHeEECCCCC
Confidence 9999853210 0 1 1389999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
++.+++.+.+++.+|++++.+...+.++++++|+|+ |++|++++++++..|+ .++++. ++++.+.++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999999888888999999999998 8999999999999999 777776 6677788888999888876
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
.. .++.+.+.++..+ ++|++++++++.. ....+++++++ |+++.+|..
T Consensus 193 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~ 241 (325)
T cd08271 193 ND--EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGR 241 (325)
T ss_pred CC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCC
Confidence 65 4566677777766 8999999999866 66789999997 999999754
No 113
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=3e-29 Score=236.98 Aligned_cols=240 Identities=23% Similarity=0.295 Sum_probs=193.7
Q ss_pred eeeeeccCCCCeEEEEeecCCC---CCCeEEEEEeeeecCccccccccCCCCCCC-CCcccCcceeEEEEEeCCCCC-CC
Q 019139 11 KAAVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGEGVT-EV 85 (345)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~---~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~Vv~~G~~v~-~~ 85 (345)
|++++.+++.++++++++.|.| +++||+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888888888876 899999999999999999887754322222 377899999999999999998 89
Q ss_pred CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc----eEE
Q 019139 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV----SVA 161 (345)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~ 161 (345)
++||+|+......++ . .|+|++|++++.+ .++
T Consensus 82 ~~Gd~V~~~~~~~~~--------------------------~------------------~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPYG--------------------------G------------------QGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCCC--------------------------C------------------CceeeEEEEEccccccceeE
Confidence 999999864321110 1 2499999999987 789
Q ss_pred EcCCCCChhhhcccccchhhhhHHHHhhc-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhc
Q 019139 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF 238 (345)
Q Consensus 162 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~-~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~ 238 (345)
++|+++++.+++.+++++.|||+++.... ++++|++|+|+|+ |++|++++|+|+++|. +.++++.+ +++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHh
Confidence 99999999999999999999999887666 7999999999998 8999999999999854 35666654 5556678899
Q ss_pred CCceEeCCCCCCc--cHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhc---cCCeEEEEec
Q 019139 239 GVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH---KGWGTSVIVG 296 (345)
Q Consensus 239 g~~~~i~~~~~~~--~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~---~~~G~~v~~G 296 (345)
|++.+++..+... .+.+.+...+++ ++|++||++|+...+..++++++ ++ |+++.++
T Consensus 197 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~ 259 (352)
T cd08247 197 GADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIV 259 (352)
T ss_pred CCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEe
Confidence 9998888765211 233334444424 89999999998666889999999 97 9999875
No 114
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=4.2e-29 Score=233.51 Aligned_cols=231 Identities=26% Similarity=0.352 Sum_probs=197.2
Q ss_pred eeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
||+++...+.+ +++++.+.|.|.++||+||+.++++|+.|+.++.|..+. ..+|.++|||++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888877654 888888999999999999999999999999988877643 256889999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+... .. |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALT-------------------------------RV------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeC-------------------------------CC------------------cceeeEEEechHHeEECCCCC
Confidence 99998431 01 389999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~ 246 (345)
++.+++.+++++.+||+++.....+.++++|+|+|+ |++|++++++|+.+|+ +|++++. +++.+.++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999999877788999999999997 9999999999999999 8888887 88888999999754 444
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
.. .++.+. ....+++|+++|++++.. ....+++++++ |+++.+|...
T Consensus 190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~ 236 (331)
T cd08273 190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNS 236 (331)
T ss_pred CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCC
Confidence 33 233332 333458999999999877 88999999997 9999999754
No 115
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=7.8e-29 Score=230.05 Aligned_cols=260 Identities=25% Similarity=0.328 Sum_probs=217.7
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+.+..++.+ +.+++.+.|.+.+++|+||+.++++|+.|.....+.++. ..+|.++|||++|+|+.+|+.+..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 678888776654 666777777789999999999999999999888776543 24578999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV-------------------------------AG------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc-------------------------------CC------------------CcceeEEEecHHHcEeCCCC
Confidence 999998421 11 38999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+++.+++.++.++.++|+++.+...+.++++++|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998888889999999999997 9999999999999999 8899988898888888999887777
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
... .++.+.+.....+ ++|++++++|+. .+...+++++++ |+++.+|...... ..+++..++. ++++.++...
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 YRE--EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD-GRIVQIGFQGGRK-AELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred cCc--hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC-cEEEEEecCCCCc-CCCChHHHHhcCCEEEEEehh
Confidence 654 4566677777666 899999999985 488899999997 9999999743222 2566666645 9999998755
Q ss_pred C
Q 019139 324 G 324 (345)
Q Consensus 324 ~ 324 (345)
.
T Consensus 266 ~ 266 (325)
T TIGR02824 266 A 266 (325)
T ss_pred h
Confidence 4
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.6e-28 Score=228.33 Aligned_cols=265 Identities=28% Similarity=0.376 Sum_probs=217.9
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~ 86 (345)
|||+++...+.+ +.+.+.+.|.+.+++|+|++.++++|+.|.....+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 678888876543 677788888889999999999999999999888776543 24578999999999999999999999
Q ss_pred CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (345)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (345)
+||+|+..+...+ . .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~-------------------------~-~~------------------g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAADL-------------------------G-QY------------------GTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEecccccc-------------------------C-CC------------------ccceEEEEechHhcEeCCCC
Confidence 9999986432100 0 11 38999999999999999999
Q ss_pred CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
+++.+++.+++++.++|.++.....+.++++++|+|+ |++|++++++++..|+ ++++++.++++.+.++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877888999999999998 9999999999999999 8999888899988888899888887
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 323 (345)
... ..+.+.+.+...+ ++|++++++++. .....+++++++ |+++.+|.... ....++....+. ++++.++...
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TDE--EDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cCC--ccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecc
Confidence 665 4566667777766 899999999984 488899999997 99999987432 233445443344 8898887654
Q ss_pred C
Q 019139 324 G 324 (345)
Q Consensus 324 ~ 324 (345)
.
T Consensus 271 ~ 271 (328)
T cd08268 271 E 271 (328)
T ss_pred c
Confidence 3
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=1.7e-28 Score=225.76 Aligned_cols=261 Identities=23% Similarity=0.336 Sum_probs=208.2
Q ss_pred cCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccC
Q 019139 29 VAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKS 107 (345)
Q Consensus 29 ~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~ 107 (345)
.|++.+++|+||+.++++|+.|+....+.++. ..+|.++|+|++|+|+++|++++++++||+|+.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 57788999999999999999999988876543 2568899999999999999999999999999853210
Q ss_pred CCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHH
Q 019139 108 GKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187 (345)
Q Consensus 108 ~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~ 187 (345)
.+ |+|++|++++.+.++++|+++++.+++.++.++.+||+++
T Consensus 72 -------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------SM------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------CC------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 11 3899999999999999999999999999999999999987
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-Cc
Q 019139 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV 265 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~ 265 (345)
....++++++++|+|+ |++|++++|+++.+|+ +|+++++++++.+.++++|++.+++... .++.+.+..++.+ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCc
Confidence 5788999999999976 9999999999999999 8999999999999999999998888765 5677777777776 89
Q ss_pred cEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCC---c---ccccHHHHHHHHh
Q 019139 266 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF---K---SRSQVPWLVDKYM 339 (345)
Q Consensus 266 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~---~~~~~~~~~~~~~ 339 (345)
|+++|++++ ..+...+++++++ |+++.+|.........+++..+..++.+....+... . ..+.+.+++++++
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999976 4588999999997 999999864322222344433333444433322111 0 1133566667776
Q ss_pred ccc
Q 019139 340 KKV 342 (345)
Q Consensus 340 ~g~ 342 (345)
+|.
T Consensus 269 ~g~ 271 (303)
T cd08251 269 EGE 271 (303)
T ss_pred CCC
Confidence 664
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.97 E-value=3.5e-28 Score=224.12 Aligned_cols=271 Identities=24% Similarity=0.286 Sum_probs=214.2
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~ 84 (345)
|||+++..++.. +.+++.+.|.+.++||+||+.++++|+.|+....|... ...+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888877753 56677788888999999999999999999998877653 2355889999999999999999999
Q ss_pred CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (345)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (345)
+++||+|+..... + .+ |+|++|+.++.+.++++|
T Consensus 81 ~~~G~~V~~~~~~-------------------------~---~~------------------g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF-------------------------T---RG------------------GAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC-------------------------C---CC------------------CcceeEEEecHHHhccCC
Confidence 9999999854210 0 12 389999999999999999
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~ 243 (345)
+++++..++.+++.+.++++++.....+.++++|+|+|+ |.+|++++++++..|+ +|++++.++ +.+.++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999899999998877777999999999997 9999999999999999 788887777 7888888998888
Q ss_pred eCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeec
Q 019139 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG 323 (345)
Q Consensus 244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 323 (345)
++... .++.+ ....+++|+++|++++. .....+++++++ |+++.+|..... .. ..+..++++....+.
T Consensus 193 ~~~~~--~~~~~---~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~--~~---~~~~~~~~~~~~~~~ 260 (309)
T cd05289 193 IDYTK--GDFER---AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPA--EQ---AAKRRGVRAGFVFVE 260 (309)
T ss_pred EeCCC--Cchhh---ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcc--hh---hhhhccceEEEEEec
Confidence 77654 23322 22223899999999987 489999999997 999999974321 11 112226666665432
Q ss_pred CCcccccHHHHHHHHhccc
Q 019139 324 GFKSRSQVPWLVDKYMKKV 342 (345)
Q Consensus 324 ~~~~~~~~~~~~~~~~~g~ 342 (345)
.. ...+.++++++.++.
T Consensus 261 ~~--~~~~~~~~~~~~~~~ 277 (309)
T cd05289 261 PD--GEQLAELAELVEAGK 277 (309)
T ss_pred cc--HHHHHHHHHHHHCCC
Confidence 11 456777777777664
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=7.9e-28 Score=222.93 Aligned_cols=277 Identities=30% Similarity=0.446 Sum_probs=222.8
Q ss_pred eeeeeeccCCCC--eEEEEeecCCCC-CCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCC
Q 019139 10 CKAAVAWEPNKP--LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (345)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~ 85 (345)
|+|+++..++.+ +.+.+.+ |.+. +++|+||+.++++|+.|+....|.+.. ...|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 678888754433 6777777 7666 499999999999999999988776532 2456789999999999999999999
Q ss_pred CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (345)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (345)
++||+|+... .. |++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT-------------------------------GQ------------------GGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec-------------------------------CC------------------ceeEEEEEcCHHHceeCCC
Confidence 9999998431 01 3899999999999999999
Q ss_pred CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (345)
Q Consensus 166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i 244 (345)
++++.+++.+..++.+|+.++.....++++++|+|+|+ |++|++++++|+..|+ .|++++.++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999998888899999998877788999999999998 9999999999999999 799999999999999999988887
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF 322 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 322 (345)
+... .++.+.+...+.+ ++|.++|++|+. ....++++++++ |+++.+|....... .+++...+. ++++.++.+
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 190 DYRD--PDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW 264 (323)
T ss_pred ecCC--ccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence 7665 5677778887776 899999999984 488899999997 99999997432211 233433334 899999876
Q ss_pred cCCcc------cccHHHHHHHHhccc
Q 019139 323 GGFKS------RSQVPWLVDKYMKKV 342 (345)
Q Consensus 323 ~~~~~------~~~~~~~~~~~~~g~ 342 (345)
..+.. .+.+.++++++.++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (323)
T cd08241 265 GAYARREPELLRANLAELFDLLAEGK 290 (323)
T ss_pred ccccchhHHHHHHHHHHHHHHHHCCC
Confidence 54321 134566777776664
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.7e-27 Score=220.41 Aligned_cols=277 Identities=23% Similarity=0.329 Sum_probs=216.5
Q ss_pred eeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139 11 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (345)
Q Consensus 11 ~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~ 87 (345)
||+++...+. .+.+.+.+.|+|.+++|+||+.++++|+.|...+.|.++. ...|.++|||++|+|+.+|++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4566665554 3777788888889999999999999999999988876543 245778999999999999999999999
Q ss_pred CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (345)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 167 (345)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLT-------------------------------RF------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEec-------------------------------CC------------------CeeeeEEEecHHHeEECCCCC
Confidence 99998431 11 389999999999999999999
Q ss_pred ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~i~ 245 (345)
++.+++.+++++.++|+++.....++++++|+|+|+ |++|++++++|+.+ +. .++. ...+++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVG-TASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEE-eCCHHHHHHHHHcCCcEEee
Confidence 999999999999999999888888999999999998 99999999999999 33 2322 23455778888899988887
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC--Cc-------------eecChhh
Q 019139 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG--QE-------------ISTRPFQ 310 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~--~~-------------~~~~~~~ 310 (345)
... .++.+.+...+.+++|+++|++|+.. ....+++++++ |+++.+|..... .. +.+.+..
T Consensus 190 ~~~--~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 190 YRT--QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred CCC--CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 765 56667777776568999999999854 88899999997 999999864321 11 1233334
Q ss_pred hcc-ccEEEEeeecCCccc-----ccHHHHHHHHhccc
Q 019139 311 LVT-GRVWKGTAFGGFKSR-----SQVPWLVDKYMKKV 342 (345)
Q Consensus 311 ~~~-~~~i~g~~~~~~~~~-----~~~~~~~~~~~~g~ 342 (345)
++. ++++.++.+...... ..+.++++++.+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (337)
T cd08275 266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGK 303 (337)
T ss_pred HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCC
Confidence 455 999999875422111 23566777776664
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=1.3e-27 Score=217.84 Aligned_cols=251 Identities=22% Similarity=0.271 Sum_probs=203.1
Q ss_pred CeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCC
Q 019139 35 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (345)
Q Consensus 35 ~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~ 114 (345)
+||+||+.++++|++|++...|..+ .+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 5899999999999999998887652 3578999999999999999999999999998431
Q ss_pred CcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCC
Q 019139 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (345)
Q Consensus 115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~ 194 (345)
.|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1389999999999999999999999999998999999999878888999
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC--CceEeCCCCCCccHHHHHHhhcCC-CccEEEE
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 270 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g--~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d 270 (345)
+++|+|+|+ |++|++++|+|+.+|+ ++++++.++++.+.+++.+ ++.+++..+ .++.+.+.+++.+ ++|+++|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEe
Confidence 999999986 9999999999999999 8999989889999998888 677777654 4567778877766 8999999
Q ss_pred ccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc------ccccHHHHHHHHhccc
Q 019139 271 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK------SRSQVPWLVDKYMKKV 342 (345)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~ 342 (345)
++|+. .+...+++++++ |+++.+|.........++...+..++++.+..+.... ..+.+.++++++.+++
T Consensus 186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGV 261 (293)
T ss_pred CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCC
Confidence 99987 599999999997 9999998754221223333333336666665433211 1134566777776664
No 122
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.1e-27 Score=219.20 Aligned_cols=264 Identities=25% Similarity=0.298 Sum_probs=202.1
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCC
Q 019139 23 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 99 (345)
Q Consensus 23 ~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~ 99 (345)
++++.|.|+|.++||+||+.++++|+.|...+.|..+. ...|..+|||++|+|+++|++++.+++||+|+......
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 77888999999999999999999999999988776531 24567899999999999999999999999998542100
Q ss_pred CCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccch
Q 019139 100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179 (345)
Q Consensus 100 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~ 179 (345)
.. |+|++|+.++.+.++++|+++++.+++.+++++
T Consensus 94 ---------------------------~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 94 ---------------------------GG------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred ---------------------------CC------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 11 389999999999999999999999999999999
Q ss_pred hhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHH
Q 019139 180 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (345)
Q Consensus 180 ~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~ 258 (345)
.+||+++.....++++++|+|+|+ |++|++++++|+.+|+ +|++++++ ++.+.++++|++.+++... .++. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h
Confidence 999999877777999999999998 9999999999999999 88888765 7888889999988887665 2222 3
Q ss_pred hhcCC-CccEEEEccCCH-HHHHHHHHHhccCCeEEEEeccCCCCCceec---ChhhhccccEEEEeeecCCcccccHHH
Q 019139 259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEIST---RPFQLVTGRVWKGTAFGGFKSRSQVPW 333 (345)
Q Consensus 259 ~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~ 333 (345)
..+.+ ++|+++|++|+. ......+..++++ |+++.+|.......... ..........+....... ..+.+.+
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 278 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQ 278 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHH
Confidence 34444 899999999853 2233444448997 99999997543222222 111222233333332211 2466788
Q ss_pred HHHHHhccc
Q 019139 334 LVDKYMKKV 342 (345)
Q Consensus 334 ~~~~~~~g~ 342 (345)
+++++++++
T Consensus 279 ~~~~l~~~~ 287 (319)
T cd08267 279 LAELVEEGK 287 (319)
T ss_pred HHHHHHCCC
Confidence 888887765
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=9.8e-27 Score=211.94 Aligned_cols=246 Identities=22% Similarity=0.339 Sum_probs=198.8
Q ss_pred EEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCC
Q 019139 39 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118 (345)
Q Consensus 39 Vkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~ 118 (345)
||+.++++|+.|++...|.++ .|.++|||++|+|+++|+.++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999999887654 357899999999999999999999999998421
Q ss_pred CCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEE
Q 019139 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 198 (345)
Q Consensus 119 ~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~V 198 (345)
.|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+.++++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 13899999999999999999999999999999999999988788889999999
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC--ceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCC
Q 019139 199 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN 274 (345)
Q Consensus 199 lI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~--~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~ 274 (345)
+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+ +.++++.+ .++.+.+.+...+ ++|+++|++++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999999999999999998 67777655 4566777777766 89999999996
Q ss_pred HHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc-----ccccHHHHHHHHhccc
Q 019139 275 VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK-----SRSQVPWLVDKYMKKV 342 (345)
Q Consensus 275 ~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~g~ 342 (345)
..+...+++++++ |+++.+|.........+++..+.+++++.+..+.... ..+.+.++++++.+++
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGV 256 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCC
Confidence 5588899999997 9999999743222233444443337777776532111 1133556666666554
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.93 E-value=1e-23 Score=185.56 Aligned_cols=263 Identities=22% Similarity=0.268 Sum_probs=196.1
Q ss_pred EEEEeecC-CCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCc----ceeEEEEEeCCCCCCCCCCCEEEecCc
Q 019139 23 VIEDVQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGH----EAAGIVESVGEGVTEVQPGDHVIPCYQ 96 (345)
Q Consensus 23 ~~~~~~~p-~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~----e~~G~Vv~~G~~v~~~~~Gd~V~~~~~ 96 (345)
+.++++++ ++++++||||.+|-+..|...--++-..+.. -.|+.||- .++|+|++ |+.+++++||.|..
T Consensus 25 ~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g--- 99 (343)
T KOG1196|consen 25 TTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWG--- 99 (343)
T ss_pred eeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEE---
Confidence 33445544 4589999999999999654433222111110 11233332 67899999 56678999999952
Q ss_pred CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce--EEEcC--CCCChhhh
Q 019139 97 AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS--VAKID--PQAPLDKV 172 (345)
Q Consensus 97 ~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~iP--~~l~~~~a 172 (345)
+. +|.||.++++.. .+++| .+.++...
T Consensus 100 ---------------------------~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~y 130 (343)
T KOG1196|consen 100 ---------------------------IV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYY 130 (343)
T ss_pred ---------------------------ec----------------------cceEEEEecCcchhcccCCCCCccCHhhh
Confidence 22 799999997643 44444 34444443
Q ss_pred c-ccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCC
Q 019139 173 C-LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDH 249 (345)
Q Consensus 173 a-~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~ 249 (345)
. .+..+..|||..+.+.+.+++|++|+|-|| |++|+++.|+|+.+|+ .|+++..+++|.++++ ++|.+..+||+++
T Consensus 131 lg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e 209 (343)
T KOG1196|consen 131 LGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE 209 (343)
T ss_pred hhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc
Confidence 3 367789999999999999999999999988 9999999999999999 9999999999999886 5799999999982
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCC---CCceecCh-hhhcc-ccEEEEeeecC
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS---GQEISTRP-FQLVT-GRVWKGTAFGG 324 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~---~~~~~~~~-~~~~~-~~~i~g~~~~~ 324 (345)
.+..+++.+..+.++|+.||.+|+.. ++..+..++.. ||++.||+-+. ..+..+.. ...+. .++|+|+....
T Consensus 210 -~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d 286 (343)
T KOG1196|consen 210 -SDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSD 286 (343)
T ss_pred -cCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeec
Confidence 47888999988889999999999965 99999999995 99999997541 11112222 23334 99999988776
Q ss_pred Cccc--ccHHHHHHHHhcccc
Q 019139 325 FKSR--SQVPWLVDKYMKKVN 343 (345)
Q Consensus 325 ~~~~--~~~~~~~~~~~~g~~ 343 (345)
+.+. +-++.+..++++|++
T Consensus 287 ~~d~~~k~ld~l~~~ikegKI 307 (343)
T KOG1196|consen 287 YLDKYPKFLDFLLPYIKEGKI 307 (343)
T ss_pred hhhhhHHHHHHHHHHHhcCce
Confidence 6543 445777788888876
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.92 E-value=2.4e-23 Score=189.99 Aligned_cols=219 Identities=27% Similarity=0.341 Sum_probs=173.4
Q ss_pred CCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCccccccc
Q 019139 56 GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 135 (345)
Q Consensus 56 g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~ 135 (345)
|.+|. ++|.++|||++|+|+++|++++.+++||+|+..
T Consensus 14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------- 51 (277)
T cd08255 14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------- 51 (277)
T ss_pred cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence 43433 488999999999999999999999999999842
Q ss_pred CCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHH
Q 019139 136 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAK 215 (345)
Q Consensus 136 ~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~ 215 (345)
+.|++|+.++.+.++++|+++++.+++.+ .++.+||+++ ...+++++++++|+|+|++|++++++|+
T Consensus 52 -----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~ 118 (277)
T cd08255 52 -----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK 118 (277)
T ss_pred -----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 16899999999999999999999998888 7899999987 5788999999999988999999999999
Q ss_pred HcCCCeEEEEcCChhHHHHHHhcC-CceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEE
Q 019139 216 AAGASRVIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 293 (345)
Q Consensus 216 ~~G~~~vi~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 293 (345)
.+|.++|+++++++++.++++++| ++.++...+ ....+ ++|++||+++....+...+++++++ |+++
T Consensus 119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~ 187 (277)
T cd08255 119 AAGAREVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVV 187 (277)
T ss_pred HcCCCcEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEE
Confidence 999943999999999999999999 454443321 11233 8999999999777789999999997 9999
Q ss_pred EeccCCCCCceecChhhhcc-ccEEEEeeecCCc---------ccccHHHHHHHHhccc
Q 019139 294 IVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK---------SRSQVPWLVDKYMKKV 342 (345)
Q Consensus 294 ~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~---------~~~~~~~~~~~~~~g~ 342 (345)
.+|..... .. .....+.. .+++.++...... ..+.+.++++++.+++
T Consensus 188 ~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 244 (277)
T cd08255 188 LVGWYGLK-PL-LLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGR 244 (277)
T ss_pred EEeccCCC-cc-ccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCC
Confidence 99975432 21 11223333 6677777654321 1256788888888775
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.89 E-value=9e-23 Score=203.83 Aligned_cols=257 Identities=17% Similarity=0.187 Sum_probs=210.0
Q ss_pred eEEEEeecC---CCCCCeEEEEEeeeecCccccccccCCCCCCC-------CCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 019139 22 LVIEDVQVA---PPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-------FPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (345)
Q Consensus 22 ~~~~~~~~p---~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-------~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V 91 (345)
+...+-|.. +..++.=+--|-|+.||..|+....|+.++.- ..+++|-||+|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 444444433 23577779999999999999999999986542 347999999997 3559999
Q ss_pred EecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhh
Q 019139 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 171 (345)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 171 (345)
+... ... ++|+-+.++.+.+|.+|.+..+++
T Consensus 1499 M~mv-------------------------------pAk------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMV-------------------------------PAK------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEee-------------------------------ehh------------------hhhhhhhcchhhhhhCCcccchhh
Confidence 7421 111 788889999999999999999999
Q ss_pred hcccccchhhhhHHHHhhcCCCCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC----CceEeCC
Q 019139 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTEFVNP 246 (345)
Q Consensus 172 aa~~~~~~~ta~~al~~~~~~~~g~~VlI~G-ag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g----~~~~i~~ 246 (345)
|+..|+.++|+|+||+.++++++|+++||++ +|++|++|+.+|.++|+ .|+.+..+.+|++++++.. ..++-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 9999999999999999999999999999995 59999999999999999 8999999999999887533 3444455
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCC
Q 019139 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 325 (345)
++ .+|.+-+.+.|.| |+|+|+++...+. ++.+++||+.+ |||..+|-..-..+-++-+.-|++|.+++|..+.+.
T Consensus 1609 Rd--tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RD--TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred cc--ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence 54 7899999999999 9999999999877 99999999997 999999976555666777777778999999998777
Q ss_pred ccc--ccHHHHHHHHhccc
Q 019139 326 KSR--SQVPWLVDKYMKKV 342 (345)
Q Consensus 326 ~~~--~~~~~~~~~~~~g~ 342 (345)
.+. ++..++..++++|.
T Consensus 1685 mege~e~~~ev~~Lv~eGI 1703 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGI 1703 (2376)
T ss_pred hcCcHHHHHHHHHHHHhhh
Confidence 532 33355566666554
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=2.7e-23 Score=163.23 Aligned_cols=108 Identities=37% Similarity=0.694 Sum_probs=93.3
Q ss_pred CCeEEEEEeeeecCccccccccCC-CCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCC
Q 019139 34 AGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 112 (345)
Q Consensus 34 ~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 112 (345)
||||||||.++|||++|++++.|. .....+|.++|||++|+|+++|++++.|++||+|+..+...|+.|.+|+.+.++.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 799999999999999999999984 4555899999999999999999999999999999999998899999999999999
Q ss_pred CCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139 113 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (345)
Q Consensus 113 c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 163 (345)
|++.... |+. .+ |+||||+.+|+++++++
T Consensus 81 c~~~~~~---g~~-~~------------------G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVL---GLG-LD------------------GGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEET---TTS-ST------------------CSSBSEEEEEGGGEEEE
T ss_pred CCCCCEe---EcC-CC------------------CcccCeEEEehHHEEEC
Confidence 9876642 222 33 49999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.79 E-value=2.3e-18 Score=139.27 Aligned_cols=128 Identities=29% Similarity=0.445 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHH
Q 019139 205 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283 (345)
Q Consensus 205 ~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~ 283 (345)
++|++++|+|+.+|+ +|++++++++|+++++++|++.++++++ .++.+.+++.+++ ++|++|||+|.+..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999997 9999999999999999999999999987 6699999999998 99999999998888999999
Q ss_pred HhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhc
Q 019139 284 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMK 340 (345)
Q Consensus 284 ~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~ 340 (345)
+++++ |+++++|... +..++++...++. ++++.|++.++ .++++++++++++
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 99998 9999999965 5788999999988 99999998775 4889999988864
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.31 E-value=4e-11 Score=117.00 Aligned_cols=145 Identities=19% Similarity=0.238 Sum_probs=105.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCC-----------ccHHHHHHh
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHD-----------KPIQQVLVD 259 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~-----------~~~~~~~~~ 259 (345)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ .++.+...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 89999999999999999999854 5543311 122222222
Q ss_pred h-cC--CCccEEEEccCC-----HHHH-HHHHHHhccCCeEEEEeccCCCCC-ceecChhhhc--cccEEEEeeecCCcc
Q 019139 260 L-TD--GGVDYSFECIGN-----VSVM-RAALECCHKGWGTSVIVGVAASGQ-EISTRPFQLV--TGRVWKGTAFGGFKS 327 (345)
Q Consensus 260 ~-~~--gg~d~v~d~~g~-----~~~~-~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~--~~~~i~g~~~~~~~~ 327 (345)
. .. +++|++|+|++. +.++ +++++.++++ |+++.+|...++. +++++...++ +++++.|+....
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P--- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP--- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc---
Confidence 2 33 379999999996 3354 9999999998 9999999853331 3455444554 399999987432
Q ss_pred cccHH-HHHHHHhccc
Q 019139 328 RSQVP-WLVDKYMKKV 342 (345)
Q Consensus 328 ~~~~~-~~~~~~~~g~ 342 (345)
.++. +..+++.++.
T Consensus 317 -~~~p~~As~lla~~~ 331 (509)
T PRK09424 317 -SRLPTQSSQLYGTNL 331 (509)
T ss_pred -hhHHHHHHHHHHhCC
Confidence 2444 3666666554
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.15 E-value=1e-09 Score=104.66 Aligned_cols=140 Identities=18% Similarity=0.196 Sum_probs=109.7
Q ss_pred hHHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc
Q 019139 183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 183 ~~al~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
+.++.+..+ .-+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH----
Confidence 344444433 4689999999999999999999999999 89999999999999999998532 1 11222
Q ss_pred CCCccEEEEccCCHHHHHHH-HHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHH--HHHHH
Q 019139 262 DGGVDYSFECIGNVSVMRAA-LECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVP--WLVDK 337 (345)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~--~~~~~ 337 (345)
.++|++|+++|...++... +..++++ |+++.+|.. +.++++..+.. ++++.|+..... .-+++ +.+++
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2589999999998888776 9999997 999999963 46788888877 999999875422 12455 68888
Q ss_pred Hhcccc
Q 019139 338 YMKKVN 343 (345)
Q Consensus 338 ~~~g~~ 343 (345)
+++|+.
T Consensus 328 La~Grl 333 (413)
T cd00401 328 LAEGRL 333 (413)
T ss_pred hhCcCC
Confidence 988875
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.45 E-value=1.6e-06 Score=84.74 Aligned_cols=127 Identities=19% Similarity=0.239 Sum_probs=91.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCC-----------CccHHHHHHhh
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLVDL 260 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~-----------~~~~~~~~~~~ 260 (345)
.++++|+|+|+|.+|+++++.++.+|+ .|++++.+.++++.++++|++.+ ++..+. ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 357999999999999999999999999 79999999999999999998763 232110 01233323332
Q ss_pred cC---CCccEEEEcc---CCHH---HHHHHHHHhccCCeEEEEeccCCCCCceecChhh--hc-c-ccEEEEeee
Q 019139 261 TD---GGVDYSFECI---GNVS---VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ--LV-T-GRVWKGTAF 322 (345)
Q Consensus 261 ~~---gg~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~--~~-~-~~~i~g~~~ 322 (345)
.. .++|++|+|+ |.+. ..+..++.++++ +.++.++...++ .+++.... +. . ++++.|...
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~n 313 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYTD 313 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeCC
Confidence 22 2799999999 5432 467889999998 999999885544 55555221 22 2 588888763
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.25 E-value=1.7e-05 Score=76.19 Aligned_cols=103 Identities=25% Similarity=0.317 Sum_probs=79.0
Q ss_pred hhHHHHhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhh
Q 019139 182 GLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260 (345)
Q Consensus 182 a~~al~~~~~~~-~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 260 (345)
.|.++.+...+. .|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|++ +. ++.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------TMEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------CHHHHH---
Confidence 355554443444 89999999999999999999999999 899999988887666666754 22 122222
Q ss_pred cCCCccEEEEccCCHHHHH-HHHHHhccCCeEEEEeccCC
Q 019139 261 TDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~ 299 (345)
.++|++++++|....+. ..+..++++ +.++..|...
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 26899999999887676 678889997 9999998753
No 133
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.13 E-value=7.1e-05 Score=69.07 Aligned_cols=111 Identities=21% Similarity=0.265 Sum_probs=82.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
.+.+|+|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|+..+ ... ++ .+.. ..+|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~~----~l----~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HLS----EL----AEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cHH----HH----HHHh-CCCCEEEECCC
Confidence 58999999999999999999999999 99999999888888888886532 111 12 2222 26999999988
Q ss_pred CHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139 274 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT 320 (345)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 320 (345)
........+..++++ +.++.++..+++. ++. .... ++++.+.
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggt--d~~--~a~~~Gv~~~~~ 262 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGT--DFE--YAEKRGIKALLA 262 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCc--Cee--ehhhCCeEEEEE
Confidence 755456777889997 9999999865443 332 2233 7777753
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.12 E-value=8.3e-06 Score=74.36 Aligned_cols=103 Identities=27% Similarity=0.435 Sum_probs=71.8
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCC
Q 019139 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 263 (345)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~g 263 (345)
...++++++||.+|+|+ |..+.++++..|.. +|++++.+++.++.+++. +.+.+.... .++. .+ .+..+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d~~-~l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GEIE-AL-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cchh-hC-CCCCC
Confidence 35678999999999987 88888888887753 699999999988888753 332221111 1111 11 12234
Q ss_pred CccEEEEcc------CCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 264 GVDYSFECI------GNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 264 g~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
.+|+|+... .....+..+.+.|+++ |++++.+..
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~ 185 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVV 185 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEee
Confidence 899998543 2245689999999998 999998764
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.10 E-value=5.5e-05 Score=72.30 Aligned_cols=101 Identities=25% Similarity=0.343 Sum_probs=77.5
Q ss_pred hHHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc
Q 019139 183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 183 ~~al~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
+.++.+... ..+|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|+. +. +..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~-------~leeal---- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM-------TMEEAA---- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC-------CHHHHH----
Confidence 344434433 4689999999999999999999999999 899998888877777777763 22 122222
Q ss_pred CCCccEEEEccCCHHHHHH-HHHHhccCCeEEEEeccC
Q 019139 262 DGGVDYSFECIGNVSVMRA-ALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~-~~~~l~~~~G~~v~~G~~ 298 (345)
.+.|++|+++|....+.. .+..++++ +.++..|..
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 257999999999887765 88889997 999999874
No 136
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.98 E-value=2.9e-07 Score=88.92 Aligned_cols=156 Identities=18% Similarity=0.189 Sum_probs=101.9
Q ss_pred ccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccC
Q 019139 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 145 (345)
Q Consensus 66 ~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~ 145 (345)
.-|.|+++.+.+++++++. +|+..+.. |+.|++| ++.|...... |.. .+
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~---g~~-l~----------------- 137 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV---GKV-LE----------------- 137 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc---hHH-HH-----------------
Confidence 5688999999999998876 55555555 7888888 4555443321 111 22
Q ss_pred cceeeeeEEeecceEEE---c-CCCCChhhhcccccchhhhhHHH---HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 019139 146 TSTFSQYTVVHDVSVAK---I-DPQAPLDKVCLLGCGVPTGLGAV---WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG 218 (345)
Q Consensus 146 ~g~~a~~~~v~~~~~~~---i-P~~l~~~~aa~~~~~~~ta~~al---~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G 218 (345)
+.|++++.++. .+.. + +..++ .++.++ .+.....++++|+|+|+|.+|..+++.++..|
T Consensus 138 -~lf~~a~~~~k-~vr~~t~i~~~~vS------------v~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G 203 (417)
T TIGR01035 138 -RLFQKAFSVGK-RVRTETDISAGAVS------------ISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKG 203 (417)
T ss_pred -HHHHHHHHHhh-hhhhhcCCCCCCcC------------HHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCC
Confidence 38999888876 3322 2 22222 222222 12233467899999999999999999999999
Q ss_pred CCeEEEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139 219 ASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (345)
Q Consensus 219 ~~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~ 276 (345)
+.+|++++++.++.+ +++++|.. .+.. .+..+.+ .++|+||+|++++.
T Consensus 204 ~~~V~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 204 VGKILIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred CCEEEEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCC
Confidence 668999999887744 66777753 2221 1122222 26999999998654
No 137
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.97 E-value=2.3e-05 Score=72.86 Aligned_cols=109 Identities=20% Similarity=0.205 Sum_probs=79.0
Q ss_pred ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCC---CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HH
Q 019139 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV---EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FD 233 (345)
Q Consensus 158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~---~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~ 233 (345)
...+++|+.+..+.++... +.++++.++...... -++.+|+|+|+|.+|..+++.++..|..+|++++++.++ .+
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4567788888888777765 677777775322221 478999999999999999999999887789999998876 46
Q ss_pred HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHH
Q 019139 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (345)
Q Consensus 234 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~ 277 (345)
+++++|+. .++.. ++.+.+ ..+|+||.+++.+..
T Consensus 218 la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence 77888873 32221 122222 258999999998764
No 138
>PLN02494 adenosylhomocysteinase
Probab=97.94 E-value=0.00011 Score=70.97 Aligned_cols=101 Identities=26% Similarity=0.324 Sum_probs=78.5
Q ss_pred hHHHHhhcCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc
Q 019139 183 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 183 ~~al~~~~~~-~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
+.++.+...+ -.|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|+.. + +..+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence 4445444443 679999999999999999999999999 8999998887766777777652 1 1222222
Q ss_pred CCCccEEEEccCCHHH-HHHHHHHhccCCeEEEEeccC
Q 019139 262 DGGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 262 ~gg~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~G~~ 298 (345)
..|+++++.|.... ....+..++++ +.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 47999999998765 48899999997 999999974
No 139
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.92 E-value=0.00024 Score=63.97 Aligned_cols=134 Identities=22% Similarity=0.267 Sum_probs=84.0
Q ss_pred eeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 019139 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (345)
Q Consensus 148 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~ 227 (345)
+|.+|.. +...++.+++++++..+.--. +.. ....+. ....++++|+-+|+|. |.+++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555544 667888999888776654221 111 122221 1256889999999986 888776544 67757999999
Q ss_pred ChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC--CccEEEEccCCH---HHHHHHHHHhccCCeEEEEeccCC
Q 019139 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 228 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g--g~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
++...+.+++.-...-+. .. . .+..+ .+|+|+...... ..++.+.+.|+++ |++++.|...
T Consensus 151 s~~~l~~A~~n~~~~~~~-~~--~-------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~ 216 (250)
T PRK00517 151 DPQAVEAARENAELNGVE-LN--V-------YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE 216 (250)
T ss_pred CHHHHHHHHHHHHHcCCC-ce--E-------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence 999888776431110000 00 0 01112 599998766543 2356777889998 9999988653
No 140
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.87 E-value=1e-05 Score=81.51 Aligned_cols=80 Identities=26% Similarity=0.361 Sum_probs=59.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhHHHHHHhcCCceEeCCCC-
Q 019139 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKD- 248 (345)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~---------------------~~~~~~~~~~g~~~~i~~~~- 248 (345)
..+.|++|+|+|+|+.|+++++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 78888742 34567788899887766432
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139 249 HDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (345)
Q Consensus 249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~ 276 (345)
.+... +.+ ..++|++|+++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 11111 111 236999999999753
No 141
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.86 E-value=6.4e-05 Score=64.78 Aligned_cols=119 Identities=18% Similarity=0.175 Sum_probs=84.1
Q ss_pred CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH----HHHHhcCC
Q 019139 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGV 240 (345)
Q Consensus 165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~----~~~~~~g~ 240 (345)
..++......+.-+.+.|. +.+...++++++||-+|+| +|..++-+|+..| +|+.+++.++=. +.++.+|.
T Consensus 45 ~~lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~ 119 (209)
T COG2518 45 RALPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGY 119 (209)
T ss_pred CcccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCC
Confidence 3344444444555555654 4578889999999999997 5999999999988 799999988733 34567888
Q ss_pred ceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 241 ~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 295 (345)
+.+.....+ -...+... +||.|+-+.+.+..-+.+++.|+++ |+++..
T Consensus 120 ~nV~v~~gD------G~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 120 ENVTVRHGD------GSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred CceEEEECC------cccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 554322211 11123333 8999998888877668899999998 988765
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.77 E-value=0.00019 Score=68.37 Aligned_cols=118 Identities=21% Similarity=0.229 Sum_probs=78.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc-
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI- 272 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~- 272 (345)
+.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+. .++........+ .+.+.+.. ..+|++|+++
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-----~~~l~~~l-~~aDvVI~a~~ 239 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-----AYEIEDAV-KRADLLIGAVL 239 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-----HHHHHHHH-ccCCEEEEccc
Confidence 4569999999999999999999999 8999999988877664 455432222221 11222222 2689999997
Q ss_pred --CC--HH-HHHHHHHHhccCCeEEEEeccCCCCCceecChh------hhcc-ccEEEEee
Q 019139 273 --GN--VS-VMRAALECCHKGWGTSVIVGVAASGQEISTRPF------QLVT-GRVWKGTA 321 (345)
Q Consensus 273 --g~--~~-~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~------~~~~-~~~i~g~~ 321 (345)
+. +. .....++.++++ +.++.++...++ .++..-. .+.. ++++.+..
T Consensus 240 ~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~GG-~~e~~~~t~~d~p~~~~~Gv~~~~v~ 298 (370)
T TIGR00518 240 IPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQGG-CVETSRPTTHDQPTYAVHDVVHYCVA 298 (370)
T ss_pred cCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCCC-CccCCcCCCCCCCEEEECCeEEEEeC
Confidence 32 22 137777889997 999999875433 3332211 1223 78887774
No 143
>PRK08324 short chain dehydrogenase; Validated
Probab=97.68 E-value=0.00025 Score=73.08 Aligned_cols=137 Identities=24% Similarity=0.321 Sum_probs=86.3
Q ss_pred eeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 019139 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 226 (345)
Q Consensus 148 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~ 226 (345)
++++|..+|+..++.+ +..+++++..... ...+..++++++|+|+ |++|...++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5677777777777666 5566666542110 0122346789999997 9999999999999999 899999
Q ss_pred CChhHHHHHH-hcCC--c---eEeCCCCCCccHHHHHHhhc--CCCccEEEEccCC------------------------
Q 019139 227 IDPKKFDRAK-NFGV--T---EFVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN------------------------ 274 (345)
Q Consensus 227 ~~~~~~~~~~-~~g~--~---~~i~~~~~~~~~~~~~~~~~--~gg~d~v~d~~g~------------------------ 274 (345)
++.++.+.+. +++. . ...|..+ +..+.+.+.+.. .+++|++|+++|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 9887765543 3433 1 1123332 122222232221 2479999999982
Q ss_pred -HHHHHHHHHHhcc---CCeEEEEeccC
Q 019139 275 -VSVMRAALECCHK---GWGTSVIVGVA 298 (345)
Q Consensus 275 -~~~~~~~~~~l~~---~~G~~v~~G~~ 298 (345)
...++.+++.+++ + |+++.+++.
T Consensus 533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1224444566655 5 899999874
No 144
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.68 E-value=0.00068 Score=62.25 Aligned_cols=96 Identities=23% Similarity=0.314 Sum_probs=71.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
.+.+++|+|.|.+|...+..++.+|+ +|++++++.++.+.+.++|...+ .. .+ +.+.. ..+|+++.+++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~----l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NK----LEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HH----HHHHh-ccCCEEEECCC
Confidence 47899999999999999999999999 89999999887777777665321 11 11 22221 26899999987
Q ss_pred CHHHHHHHHHHhccCCeEEEEeccCCCC
Q 019139 274 NVSVMRAALECCHKGWGTSVIVGVAASG 301 (345)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~~v~~G~~~~~ 301 (345)
....-...+..++++ ..++.++..+++
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~ 245 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGG 245 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCC
Confidence 654335667788897 899999875443
No 145
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.61 E-value=0.00064 Score=65.98 Aligned_cols=100 Identities=23% Similarity=0.324 Sum_probs=75.2
Q ss_pred HHHHhhc-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcC
Q 019139 184 GAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 184 ~al~~~~-~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 262 (345)
.++.+.. ..-.|.+|+|+|.|.+|...++.++.+|+ +|++++.+..+...+...|+.. . ++.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell----- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV----- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----
Confidence 3443433 34578999999999999999999999999 8999988776655555556531 1 222222
Q ss_pred CCccEEEEccCCHHHHH-HHHHHhccCCeEEEEeccC
Q 019139 263 GGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 263 gg~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~G~~ 298 (345)
...|+++.++|....+. ..+..++++ +.++.+|..
T Consensus 308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 25899999999877664 889999997 999999874
No 146
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.59 E-value=0.00036 Score=64.17 Aligned_cols=98 Identities=24% Similarity=0.293 Sum_probs=65.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~gg~d~ 267 (345)
..++++|+-+|+|. |.+++.+++ .|+.+|++++.++...+.+++. +....+.... .+ ......+++|+
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~--~~----~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL--IY----LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe--cc----cccccCCCceE
Confidence 45789999999986 888777665 5766999999999887777542 2211111000 01 11122348999
Q ss_pred EEEccCCH---HHHHHHHHHhccCCeEEEEeccC
Q 019139 268 SFECIGNV---SVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 268 v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
|+...... ..+..+.+.|+++ |++++.|..
T Consensus 229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 99765543 3456677899998 999998864
No 147
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=97.57 E-value=1.5e-05 Score=63.61 Aligned_cols=89 Identities=20% Similarity=0.279 Sum_probs=53.1
Q ss_pred cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC--CHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-c
Q 019139 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-G 314 (345)
Q Consensus 238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~ 314 (345)
||+++++|+++ .++ ...+++|+|||++| +...+..++++| ++ |+++.++. .+....... .
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence 68999999985 444 22349999999999 655446777788 97 99999984 111111111 2
Q ss_pred cEEEEeeecCCc----ccccHHHHHHHHhcccc
Q 019139 315 RVWKGTAFGGFK----SRSQVPWLVDKYMKKVN 343 (345)
Q Consensus 315 ~~i~g~~~~~~~----~~~~~~~~~~~~~~g~~ 343 (345)
..+.+..+.+.. ..+.++++.+++++|++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l 96 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL 96 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe
Confidence 333333333211 22458999999999875
No 148
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.35 E-value=0.00041 Score=67.36 Aligned_cols=160 Identities=19% Similarity=0.202 Sum_probs=96.7
Q ss_pred ccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccC
Q 019139 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 145 (345)
Q Consensus 66 ~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~ 145 (345)
.-|+|+++.+.+++++++..-+|+.-+ |..|+.. .+.|..... .|.. .+
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI---------lgQvk~a-~~~a~~~g~---~g~~-l~----------------- 139 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI---------LGQVKDA-YALAQEAGT---VGTI-LN----------------- 139 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH---------HHHHHHH-HHHHHHcCC---chHH-HH-----------------
Confidence 469999999999999987755555432 2333322 222221111 0100 11
Q ss_pred cceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 019139 146 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK---VEPGSIVAVFGLGTVGLAVAEGAKAAGASRV 222 (345)
Q Consensus 146 ~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~---~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~v 222 (345)
+.|++.+.++ +.+..+.+ ....+.+.+++++..... -.++.+|+|+|+|.+|.++++.++..|+.+|
T Consensus 140 -~lf~~a~~~~--------k~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 140 -RLFQKAFSVA--------KRVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred -HHHHHHHHHH--------hhHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 2565544443 33332222 222355666666532222 2578999999999999999999999998789
Q ss_pred EEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139 223 IGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (345)
Q Consensus 223 i~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~ 276 (345)
++++++.++.+ +++++|.+ ++... +..+.+ .++|+||++++++.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~~----~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPLD----ELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeHH----HHHHHh-----ccCCEEEECCCCCC
Confidence 99999887754 66777753 22221 111111 26899999999754
No 149
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.30 E-value=0.0017 Score=55.77 Aligned_cols=106 Identities=19% Similarity=0.228 Sum_probs=74.2
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCce-EeCCCCC--CccHHHHHHhhcCCCcc
Q 019139 193 EPGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDH--DKPIQQVLVDLTDGGVD 266 (345)
Q Consensus 193 ~~g~~VlI~Ga--g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~-~i~~~~~--~~~~~~~~~~~~~gg~d 266 (345)
+....|+|+|+ |++|++.+.=...-|+ .|+++.++.+..+-+. ++|... -+|..++ -..+.+++++.+.|+.|
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 45678999975 9999998888888999 9999999999887765 666532 2333331 12345677777888999
Q ss_pred EEEEccCCH----------HHHHHHH----------------HHhccCCeEEEEeccCCC
Q 019139 267 YSFECIGNV----------SVMRAAL----------------ECCHKGWGTSVIVGVAAS 300 (345)
Q Consensus 267 ~v~d~~g~~----------~~~~~~~----------------~~l~~~~G~~v~~G~~~~ 300 (345)
+.++..|.+ ...++.+ ..++.. |+||.+|+...
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~ 142 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAG 142 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeE
Confidence 999988842 1122211 235675 99999998654
No 150
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.26 E-value=0.0016 Score=57.43 Aligned_cols=79 Identities=18% Similarity=0.305 Sum_probs=58.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC----ceEeCCCCCCccHHHHHHhhcCC--Cc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TEFVNPKDHDKPIQQVLVDLTDG--GV 265 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~----~~~i~~~~~~~~~~~~~~~~~~g--g~ 265 (345)
.++.++|+|+ +++|.+.++.....|+ +|+.+.|++++++.+ .+++. ...+|..+ ..+....+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 3478899999 9999999999999999 999999999988766 46772 22344443 23344445544444 79
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|+.++..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999884
No 151
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0063 Score=55.19 Aligned_cols=76 Identities=24% Similarity=0.384 Sum_probs=53.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEEEEc
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFEC 271 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v~d~ 271 (345)
.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+...+...+ .|..+ ++.+.+.+.... .+++|+++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899998 9999999999999999 89999998887776665554433 34433 123333333332 2479999999
Q ss_pred cC
Q 019139 272 IG 273 (345)
Q Consensus 272 ~g 273 (345)
.|
T Consensus 80 ag 81 (274)
T PRK05693 80 AG 81 (274)
T ss_pred CC
Confidence 88
No 152
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.18 E-value=0.0039 Score=58.13 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=71.9
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 260 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~ 260 (345)
+.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+..... +..+....
T Consensus 72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~~- 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVPE- 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhcccc-
Confidence 3455678899999999997 59999999998763 36999999998766554 466654332221 22111111
Q ss_pred cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEE
Q 019139 261 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI 294 (345)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 294 (345)
.+.+|+|+.+.+........++.|+++ |+++.
T Consensus 147 -~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv 178 (322)
T PRK13943 147 -FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV 178 (322)
T ss_pred -cCCccEEEECCchHHhHHHHHHhcCCC-CEEEE
Confidence 137999999888766567888999998 99876
No 153
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.17 E-value=0.0055 Score=54.11 Aligned_cols=103 Identities=24% Similarity=0.326 Sum_probs=66.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc---CCceEe--CCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFV--NPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~---g~~~~i--~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+++|+|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +.+ +....+ |..+ +....+.+.+.. -++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999999999999 899999988776554 222 221222 2222 122222222221 136
Q ss_pred ccEEEEccCCH-----------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139 265 VDYSFECIGNV-----------------------SVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 265 ~d~v~d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
+|.++.+.+.. ..++.+++.++++ |+++.+++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 89999888741 1244555666776 8999998743
No 154
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.14 E-value=0.011 Score=53.24 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=55.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCceEe---CCCCCCccHHHHHHhhcC-
Q 019139 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTEFV---NPKDHDKPIQQVLVDLTD- 262 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~~i---~~~~~~~~~~~~~~~~~~- 262 (345)
..+.+++|+|| +++|...+..+...|+ +++.+.|++++++.+. + .+.+-.+ |..+ +.+......++..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhc
Confidence 46789999999 9999999999999999 9999999999987663 2 2332222 3333 2222222222222
Q ss_pred -CCccEEEEccCC
Q 019139 263 -GGVDYSFECIGN 274 (345)
Q Consensus 263 -gg~d~v~d~~g~ 274 (345)
..+|+.++++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 279999999984
No 155
>PRK06182 short chain dehydrogenase; Validated
Probab=97.14 E-value=0.0056 Score=55.49 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v~ 269 (345)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ .+++.+.+.+.. .+++|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 3578999998 9999999999888999 89999998887766555444322 23333 123333333221 24799999
Q ss_pred EccCC
Q 019139 270 ECIGN 274 (345)
Q Consensus 270 d~~g~ 274 (345)
.+.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99873
No 156
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.13 E-value=0.0032 Score=60.30 Aligned_cols=109 Identities=19% Similarity=0.262 Sum_probs=74.6
Q ss_pred chhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHH
Q 019139 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257 (345)
Q Consensus 178 ~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~ 257 (345)
+....+..+.+...++++++||-+|+| .|.++..+++..|+ +|++++.+++..+.+++.....-+.... .++.
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~~--- 223 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDYR--- 223 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cchh---
Confidence 333445556677888999999999985 57788888988898 8999999999999887643221111111 1221
Q ss_pred HhhcCCCccEEEEc-----cCC---HHHHHHHHHHhccCCeEEEEec
Q 019139 258 VDLTDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 258 ~~~~~gg~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~G 296 (345)
++ .+.+|.|+.. +|. ...++.+.+.|+|+ |++++..
T Consensus 224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 12 3478988643 343 24578888899998 9998754
No 157
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.12 E-value=0.0062 Score=52.70 Aligned_cols=102 Identities=25% Similarity=0.411 Sum_probs=69.9
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcC-CceEeCCCCCCccHHHHHHhhc
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFG-VTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~----~~g-~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
....+.++++|+-+|+|. |.+++++++..+. .+|++++.+++..+.++ .++ .+.+..... +..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~-~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFT-I 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhh-c
Confidence 456788999999999987 9999999988652 38999999998877664 455 232222111 22222222 2
Q ss_pred CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEe
Q 019139 262 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 262 ~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 295 (345)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2479999985543 34577788889997 998853
No 158
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.10 E-value=0.0022 Score=52.04 Aligned_cols=97 Identities=22% Similarity=0.265 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCc--eEeCCCCCCccHHHHHHhhcCCCccEEE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~--~~i~~~~~~~~~~~~~~~~~~gg~d~v~ 269 (345)
-.+.+++|+|+|+.|.+++..+...|+++|+.+.|+.+|.+.+ ++++.. ..+.+.+ +.+.+ ..+|++|
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVI 80 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEE
Confidence 3578999999999999999999999998899999998876655 455322 1333322 21111 2699999
Q ss_pred EccCCHHH--HHHHHHHhccCCeEEEEeccC
Q 019139 270 ECIGNVSV--MRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 270 d~~g~~~~--~~~~~~~l~~~~G~~v~~G~~ 298 (345)
.+++.+.. -...+....+.-+.++.++.+
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred EecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence 99886531 122333222210477888753
No 159
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0062 Score=55.46 Aligned_cols=78 Identities=17% Similarity=0.260 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHH---hhcCCCccEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLV---DLTDGGVDYS 268 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~---~~~~gg~d~v 268 (345)
.+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+...+.+.+ .|..+ .+++.+.+. +...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 3568999998 9999999999888999 89999998888777766555433 24333 122222232 2234579999
Q ss_pred EEccC
Q 019139 269 FECIG 273 (345)
Q Consensus 269 ~d~~g 273 (345)
+.+.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 160
>PRK12742 oxidoreductase; Provisional
Probab=96.95 E-value=0.019 Score=50.59 Aligned_cols=101 Identities=23% Similarity=0.282 Sum_probs=61.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHH-HHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR-AKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~-~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~ 269 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+ ++++.+. .++++...+ .|..+ ...+.+.+.+ .+++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 3679999998 9999999999999999 7766544 4444333 344554432 23322 1222223322 24799999
Q ss_pred EccCCHH-------------------------HHHHHHHHhccCCeEEEEeccCC
Q 019139 270 ECIGNVS-------------------------VMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 270 d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
.+.|... ....++..++.. |+++.+++..
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 9987410 113344455666 8999988643
No 161
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.85 E-value=0.0067 Score=52.00 Aligned_cols=78 Identities=21% Similarity=0.259 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC---ceEeCCCCCCccHHHHHHhhcCC--CccE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDHDKPIQQVLVDLTDG--GVDY 267 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~~~~~g--g~d~ 267 (345)
-|.+|||+|+ +++|+..++-...+|- .||.+.+++++++.++..-. ..+.|..+. ....+.+.++-.. ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~-~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADR-DSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccch-hhHHHHHHHHHhhCCchhe
Confidence 3689999976 9999999999999998 89999999999999886544 234444431 2222333333333 5678
Q ss_pred EEEccC
Q 019139 268 SFECIG 273 (345)
Q Consensus 268 v~d~~g 273 (345)
++++.|
T Consensus 82 liNNAG 87 (245)
T COG3967 82 LINNAG 87 (245)
T ss_pred eeeccc
Confidence 888777
No 162
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.85 E-value=0.017 Score=49.00 Aligned_cols=103 Identities=27% Similarity=0.346 Sum_probs=71.2
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCC
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDG 263 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~g 263 (345)
...++++++.++=+|+| .|..++++++..-..+|+++++++++.+..+ ++|.+.+....- +..+.+.++.
T Consensus 28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCCC--
Confidence 45678899977778986 3777888886554559999999999888764 578775544432 1223333222
Q ss_pred CccEEEEccCC--HHHHHHHHHHhccCCeEEEEecc
Q 019139 264 GVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 264 g~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.+|.+|---|. +..++.++..|+++ |++|.=..
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 58988854332 34578888999997 99986654
No 163
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.85 E-value=0.01 Score=50.16 Aligned_cols=93 Identities=24% Similarity=0.265 Sum_probs=63.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC--
Q 019139 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN-- 274 (345)
Q Consensus 198 VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~-- 274 (345)
|+|+|+ |.+|...++.+...|+ +|+++.+++++.+. ..+.+.+. .+- .+. +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d~--~d~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GDL--FDP-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SCT--TCH-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-eee--hhh-hhhhhhhh-hcchhhhhhhhhc
Confidence 689998 9999999999999998 99999999998766 34443332 221 122 23333332 79999999984
Q ss_pred --HHHHHHHHHHhccC-CeEEEEeccC
Q 019139 275 --VSVMRAALECCHKG-WGTSVIVGVA 298 (345)
Q Consensus 275 --~~~~~~~~~~l~~~-~G~~v~~G~~ 298 (345)
......+++.++.. -.+++.++..
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred ccccccccccccccccccccceeeecc
Confidence 23356666666543 1478877754
No 164
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.84 E-value=0.014 Score=48.40 Aligned_cols=103 Identities=24% Similarity=0.311 Sum_probs=66.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
.-.|.+++|.|.|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|.+-. .+.+.+ ...|+++.+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------TLEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------CHHHHH-----hhCCEEEEC
Confidence 4678999999999999999999999999 99999999887766666676421 122222 257999999
Q ss_pred cCCHHH-HHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc
Q 019139 272 IGNVSV-MRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT 313 (345)
Q Consensus 272 ~g~~~~-~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~ 313 (345)
+|..+. -.+-++.|+++ ..+..+|.. +.+++...+-.
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~----d~Eid~~~L~~ 123 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAGHF----DVEIDVDALEA 123 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESSSS----TTSBTHHHHHT
T ss_pred CCCccccCHHHHHHhcCC-eEEeccCcC----ceeEeeccccc
Confidence 998663 35778899996 666666654 34555544433
No 165
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.82 E-value=0.015 Score=52.90 Aligned_cols=112 Identities=21% Similarity=0.333 Sum_probs=69.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee----CCCCCCccHHHHHHhh--c
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV----NPKDHDKPIQQVLVDL--T 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~-~i----~~~~~~~~~~~~~~~~--~ 261 (345)
.+.+|+|+|| +++|...+--....|+ +++.+.+..++++.+ ++.+..+ ++ |..+ .++..+.+.+. .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHHh
Confidence 5789999999 9999988877778898 555555666655544 4455544 22 2222 12333333332 2
Q ss_pred CCCccEEEEccCCH-------------------------HHHHHHHHHhccCC-eEEEEeccCCCCCceecC
Q 019139 262 DGGVDYSFECIGNV-------------------------SVMRAALECCHKGW-GTSVIVGVAASGQEISTR 307 (345)
Q Consensus 262 ~gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~ 307 (345)
-|++|+.++..|-. .....++..|++.. |+|+.+++.++...+++.
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence 35899999988731 22344555565332 999999987665554443
No 166
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=96.75 E-value=0.075 Score=49.03 Aligned_cols=138 Identities=17% Similarity=0.136 Sum_probs=84.9
Q ss_pred eeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcC---CCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 019139 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK---VEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRV 222 (345)
Q Consensus 148 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~---~~~g~~VlI~Ga-g~vG~~a~q~a~-~~G~~~v 222 (345)
.|-+|.++..+..+. +.....++..-+ .+.|.|. |.+... .-..+.|+|.+| +-+++..+..++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~--~~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYD--PEREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccC--cchhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 466666665544331 111112222223 5566654 322222 234467888887 889988888888 5555589
Q ss_pred EEEcCChhHHHHHHhcCC-ceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 223 IGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 223 i~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
|++++.. +.+..+.+|. +.++.|++ +..+....--+++|+.|.......+...+...--..+.+|..
T Consensus 166 vglTS~~-N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t 233 (314)
T PF11017_consen 166 VGLTSAR-NVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT 233 (314)
T ss_pred EEEecCc-chhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence 9986654 4568888887 66666654 333433456789999999988888888887642346777763
No 167
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.74 E-value=0.012 Score=50.07 Aligned_cols=90 Identities=31% Similarity=0.395 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~ 272 (345)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.++...........+.. . .++.+.+. ..|+++.++
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~-------~~l~ell~-----~aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y-------VSLDELLA-----QADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E-------SSHHHHHH-----H-SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e-------eehhhhcc-----hhhhhhhhh
Confidence 458999999999999999999999999 999999988766544455542 1 12333333 378887776
Q ss_pred CC-H----HHHHHHHHHhccCCeEEEEecc
Q 019139 273 GN-V----SVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 273 g~-~----~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.. + ..-...+..++++ ..+|.++-
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred ccccccceeeeeeeeeccccc-eEEEeccc
Confidence 62 1 1235667888886 88887764
No 168
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.72 E-value=0.0064 Score=47.00 Aligned_cols=92 Identities=26% Similarity=0.302 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhc----CC-ceE-eCCCCCCccHHHHHHhhcCCCcc
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNF----GV-TEF-VNPKDHDKPIQQVLVDLTDGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~~~~----g~-~~~-i~~~~~~~~~~~~~~~~~~gg~d 266 (345)
|+++||-+|+|. |.++..+++. .++ +|++++.+++..+.+++. +. +.+ +... ++ .......+++|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~----d~--~~~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG----DA--EFDPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES----CC--HGGTTTSSCEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC----cc--ccCcccCCCCC
Confidence 578999999874 8888888884 677 899999999988877542 22 111 1111 22 11112223799
Q ss_pred EEEEcc-CC---H------HHHHHHHHHhccCCeEEEE
Q 019139 267 YSFECI-GN---V------SVMRAALECCHKGWGTSVI 294 (345)
Q Consensus 267 ~v~d~~-g~---~------~~~~~~~~~l~~~~G~~v~ 294 (345)
+|+... .. . ..++.+.+.|+|+ |++++
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 999876 21 1 2377888899997 99875
No 169
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.64 E-value=0.016 Score=50.39 Aligned_cols=102 Identities=21% Similarity=0.181 Sum_probs=67.0
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCce-E-eCCCCCCccHHHHHH
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTE-F-VNPKDHDKPIQQVLV 258 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~-~-i~~~~~~~~~~~~~~ 258 (345)
+.+...++++++||-+|+| .|..++.+++..+ ..+|++++.+++-.+.++ ..+... + +...+ ..+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d----~~~~~- 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD----GKRGL- 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC----cccCC-
Confidence 3456677899999999986 3778888888764 238999999988666554 344321 1 11111 11111
Q ss_pred hhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 295 (345)
...+.+|+|+-+.......+.+.+.|+++ |++++.
T Consensus 138 -~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 -EKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred -ccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 01237999987766556567888999998 998764
No 170
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.63 E-value=0.037 Score=55.25 Aligned_cols=105 Identities=14% Similarity=0.170 Sum_probs=66.6
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---------cCCc-----eE--eCCCCCC
Q 019139 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---------FGVT-----EF--VNPKDHD 250 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---------~g~~-----~~--i~~~~~~ 250 (345)
...+.+.|.+++|+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+ .|.. .+ .|..+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-- 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-- 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence 4556678899999998 9999999999999999 89998888877654321 1211 11 12222
Q ss_pred ccHHHHHHhhcCCCccEEEEccCCHH---------------HHHHHHHHhcc-CCeEEEEeccCC
Q 019139 251 KPIQQVLVDLTDGGVDYSFECIGNVS---------------VMRAALECCHK-GWGTSVIVGVAA 299 (345)
Q Consensus 251 ~~~~~~~~~~~~gg~d~v~d~~g~~~---------------~~~~~~~~l~~-~~G~~v~~G~~~ 299 (345)
.+.+.+.. +++|++|.++|... ....+++.+.. +.++||.++..+
T Consensus 150 ---~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 ---PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred ---HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 12233322 47999999987531 12333444432 226899988753
No 171
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.62 E-value=0.024 Score=55.42 Aligned_cols=78 Identities=24% Similarity=0.375 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hH-HHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~--~~-~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
++.+++|+|+ |++|...++.+...|+ +|+++++++ ++ .+..++++...+ +|..+ .....+.+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 5789999998 9999999999999999 788887643 22 223344554322 34433 122222222221 23799
Q ss_pred EEEEccC
Q 019139 267 YSFECIG 273 (345)
Q Consensus 267 ~v~d~~g 273 (345)
++|.+.|
T Consensus 287 ~vi~~AG 293 (450)
T PRK08261 287 IVVHNAG 293 (450)
T ss_pred EEEECCC
Confidence 9999988
No 172
>PRK04148 hypothetical protein; Provisional
Probab=96.61 E-value=0.012 Score=47.40 Aligned_cols=97 Identities=22% Similarity=0.248 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
..++.+++++|.| .|...+..+..+|. .|+++|.+++..+.+++.+.+.+.+.-- ..++ .+ .+++|+++..
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~--~~----y~~a~liysi 84 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL--EI----YKNAKLIYSI 84 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH--HH----HhcCCEEEEe
Confidence 3456889999999 88755556667898 9999999999999998888765544321 1121 11 1378999998
Q ss_pred cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
-..+.....+++..+.-+.-+++.-.
T Consensus 85 rpp~el~~~~~~la~~~~~~~~i~~l 110 (134)
T PRK04148 85 RPPRDLQPFILELAKKINVPLIIKPL 110 (134)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 88877444444444432244454444
No 173
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.031 Score=49.21 Aligned_cols=79 Identities=23% Similarity=0.329 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC---ceEe--CCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFV--NPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~---~~~i--~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+ +.+.. -..+ |..+ ..++.+.+.+.. .++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 3678999998 9999999998888899 799998887665433 33321 1112 2222 123333333322 137
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 8999998763
No 174
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.60 E-value=0.031 Score=47.81 Aligned_cols=101 Identities=21% Similarity=0.237 Sum_probs=61.6
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCC-Cc
Q 019139 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDG-GV 265 (345)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~g-g~ 265 (345)
...++++++||.+|+|+-+. +..+++.. +..+|++++.++.. +..+.+.+ .+..+ ....+.+.+.... ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~--~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD--EEVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC--hhHHHHHHHHhCCCCc
Confidence 34568999999999976444 44444443 43479999998754 11233211 12222 2233344444444 89
Q ss_pred cEEEEc-c----CC------------HHHHHHHHHHhccCCeEEEEecc
Q 019139 266 DYSFEC-I----GN------------VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 266 d~v~d~-~----g~------------~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
|+|+.. . |. ...+..+.+.|+++ |++++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~ 147 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVF 147 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEc
Confidence 999952 1 21 34577888999997 99998654
No 175
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.58 E-value=0.0089 Score=52.36 Aligned_cols=102 Identities=21% Similarity=0.254 Sum_probs=68.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEe-CCCCCCccHHHHHHh
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFV-NPKDHDKPIQQVLVD 259 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~i-~~~~~~~~~~~~~~~ 259 (345)
+....+++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.+++ .|...+. ...+....+
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~------ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY------ 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC------
Confidence 4566778999999999986 47788888887753 389999999887766643 4443221 111100000
Q ss_pred hcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139 260 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 260 ~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 295 (345)
...++||+|+-....+.....+.+.|+++ |++++.
T Consensus 141 ~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 11247999886655555567888999998 998764
No 176
>PRK08017 oxidoreductase; Provisional
Probab=96.58 E-value=0.016 Score=51.82 Aligned_cols=76 Identities=25% Similarity=0.379 Sum_probs=53.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHH---HHHHhhcCCCccEEEE
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQ---QVLVDLTDGGVDYSFE 270 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~---~~~~~~~~gg~d~v~d 270 (345)
++++|+|+ |++|...++.+...|+ +|+++.++.++.+.+++.+++.+. |..+ ...+. +.+.....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 47999998 9999999999999999 899999998888777777764432 3322 11222 2232333357888888
Q ss_pred ccC
Q 019139 271 CIG 273 (345)
Q Consensus 271 ~~g 273 (345)
+.|
T Consensus 81 ~ag 83 (256)
T PRK08017 81 NAG 83 (256)
T ss_pred CCC
Confidence 876
No 177
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.57 E-value=0.034 Score=43.54 Aligned_cols=104 Identities=21% Similarity=0.306 Sum_probs=67.2
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcC
Q 019139 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~ 262 (345)
.....+.++++|+-+|+|. |..+..+++..+..++++++.++...+.++ .++...+..... +...... ...
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~-~~~ 86 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALE-DSL 86 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccCh-hhc
Confidence 3445667788999999975 888999998875458999999998877764 344332211111 1000011 112
Q ss_pred CCccEEEEccCC---HHHHHHHHHHhccCCeEEEEec
Q 019139 263 GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 263 gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G 296 (345)
..+|+|+-.... ...++.+.+.|+++ |++++-.
T Consensus 87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 87 PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 379999865432 23578888999997 9988653
No 178
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.027 Score=52.90 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+ ++.|.+.. .|..+ .++..+.+.... -+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4578999998 9999999999999999 888888888765533 33454332 23332 122222222221 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 179
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.52 E-value=0.0069 Score=52.92 Aligned_cols=102 Identities=25% Similarity=0.329 Sum_probs=67.3
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHH----HhcCCceEe-CCCCCCccHHHHHHh
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRA----KNFGVTEFV-NPKDHDKPIQQVLVD 259 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~----~~~g~~~~i-~~~~~~~~~~~~~~~ 259 (345)
+.+...+++|++||-+|+| .|..++-+++..|.. .|+.++..++-.+.+ +.++.+.+. ...+ - ...
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd----g---~~g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD----G---SEG 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-----G---GGT
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc----h---hhc
Confidence 4577789999999999986 488888899888743 589999888655444 345665332 2221 0 011
Q ss_pred h-cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEE-ec
Q 019139 260 L-TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI-VG 296 (345)
Q Consensus 260 ~-~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~-~G 296 (345)
+ ..++||.|+-+.+-+..-..+++.|+++ |++|. ++
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~ 173 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIG 173 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEES
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEc
Confidence 1 1238999998888766567888999998 99987 44
No 180
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.013 Score=54.88 Aligned_cols=78 Identities=21% Similarity=0.372 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhh--cCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDL--TDG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~--~~g 263 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+ ++.|.+.. .|..+ .++..+.+.+. ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 4679999998 9999999999999999 899988988776533 34455432 23332 12222222221 125
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|+++++.|
T Consensus 84 ~iD~lVnnAG 93 (330)
T PRK06139 84 RIDVWVNNVG 93 (330)
T ss_pred CCCEEEECCC
Confidence 7999999988
No 181
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.041 Score=48.88 Aligned_cols=101 Identities=22% Similarity=0.259 Sum_probs=60.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHHH----HHhcCCceE---eCCCCCCccHHHHHHhhcC--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~----~~~~g~~~~---i~~~~~~~~~~~~~~~~~~-- 262 (345)
.+.+++|+|+ |++|...+..+...|+ +|+++.++.. +.+. ++..+.... .|..+ +++..+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 3578999998 9999999999888999 7888777543 2222 222233211 23332 1222222322221
Q ss_pred CCccEEEEccCCH-------------------HHHHHHHHHhccCCeEEEEecc
Q 019139 263 GGVDYSFECIGNV-------------------SVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 263 gg~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+++|+++.+.|.. ..++.+.+.+..+ |+++.+++
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689988877642 2344455555665 88888875
No 182
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.034 Score=50.08 Aligned_cols=79 Identities=29% Similarity=0.344 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++.... .|..+ .+++.+.+.... .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3578999998 9999999999999999 899998887754433 44443221 23332 122333333221 24789
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998773
No 183
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.042 Score=48.22 Aligned_cols=79 Identities=23% Similarity=0.251 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHhcCCceE-eCCCCCCccHHHHHHhhc--CCCc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~----~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+. ++..+...+ .|..+ ..++.+.+.... .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 3679999998 9999999999888899 79999887654322 222333221 22222 122222222221 1378
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|+++.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998773
No 184
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.46 E-value=0.037 Score=52.68 Aligned_cols=97 Identities=23% Similarity=0.218 Sum_probs=67.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC---C-ceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---V-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g---~-~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
.+|||+|+|.+|+.+++.+.+.|-.+|++++++.++.+.+.... . ...+|..+ .+.+.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-----~~al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-----VDALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-----hHHHHHHHh-cCCEEEEe
Confidence 46899999999999999988888449999999988887776553 2 12344433 233334433 35999999
Q ss_pred cCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139 272 IGNVSVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
.+.......+-.+++.+ =.++....+.
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~ 102 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYYE 102 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence 99866554444566665 5677776543
No 185
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.033 Score=49.28 Aligned_cols=77 Identities=29% Similarity=0.425 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d 270 (345)
.+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+. +.+...+ .|..+ .....+.+.. .+++|++|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD-DAAIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC-HHHHHHHHHH--hCCCCEEEE
Confidence 4678999998 9999999999999999 8999988877665443 3443322 23332 1122222222 237899999
Q ss_pred ccCC
Q 019139 271 CIGN 274 (345)
Q Consensus 271 ~~g~ 274 (345)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 8874
No 186
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.069 Score=47.33 Aligned_cols=79 Identities=24% Similarity=0.191 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
++.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+ +..+.... .|..+ .+++.+.+.+.. .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4688999998 9999999999999999 788888877754433 22233221 23332 122222222211 14
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 187
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.24 E-value=0.015 Score=49.01 Aligned_cols=101 Identities=22% Similarity=0.242 Sum_probs=65.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC-CCCC--------------CccHHHHHHh
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDH--------------DKPIQQVLVD 259 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~-~~~~--------------~~~~~~~~~~ 259 (345)
..+|+|+|+|.+|.-|+.+++.+|+ +++..+...++.+..+..++..+.. +.+. +......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999 8999999999888888877754433 1111 1122222222
Q ss_pred hcCCCccEEEEcc--C---CHH-HHHHHHHHhccCCeEEEEeccC
Q 019139 260 LTDGGVDYSFECI--G---NVS-VMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 260 ~~~gg~d~v~d~~--g---~~~-~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
... .+|+++-+. . .+. .-+..++.|+++ ..++.+...
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 211 478888531 1 122 136777889997 889888764
No 188
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.029 Score=50.24 Aligned_cols=79 Identities=28% Similarity=0.388 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v 268 (345)
.+.+|+|+|+ |++|...++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ ...+.+.+.+.. .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 9999999999999999 898888887765443 34443222 23332 122222222221 1378999
Q ss_pred EEccCC
Q 019139 269 FECIGN 274 (345)
Q Consensus 269 ~d~~g~ 274 (345)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998773
No 189
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.03 Score=49.10 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=51.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~d~~ 272 (345)
.+++|+|+ |++|...+..+...|+ +|++++++.++.+.+++++.... +|..+ .+++.+.+..+..+++|+++.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 46899998 9999998888888999 89999988776655554432222 23322 12333334444334899999887
Q ss_pred CC
Q 019139 273 GN 274 (345)
Q Consensus 273 g~ 274 (345)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 63
No 190
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.22 E-value=0.028 Score=55.65 Aligned_cols=73 Identities=29% Similarity=0.315 Sum_probs=54.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
+.++++|+|+|.|.+|++++.+++..|+ +|++.+..+.+.+.++++|+.. +.... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc----hHhHh-----hcCCEEEEC
Confidence 4578899999999999999999999999 8999998777666677778743 32211 11122 147999998
Q ss_pred cCCH
Q 019139 272 IGNV 275 (345)
Q Consensus 272 ~g~~ 275 (345)
.|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 8854
No 191
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.19 E-value=0.013 Score=53.33 Aligned_cols=101 Identities=23% Similarity=0.324 Sum_probs=61.5
Q ss_pred HHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh
Q 019139 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 260 (345)
Q Consensus 185 al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~ 260 (345)
-+.++.++++|++||-+|+| -|.++..+|+..|+ +|++++.+++..+.++ +.|....+.... .++ +++
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~~~ 124 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----RDL 124 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----GG-
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----ccc
Confidence 35688899999999999997 57778888898899 9999999999888764 455432111111 111 112
Q ss_pred cCCCccEEEE-----ccCC---HHHHHHHHHHhccCCeEEEEe
Q 019139 261 TDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 261 ~~gg~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~ 295 (345)
. +.+|.|+. .+|. +..++.+.+.|+|+ |++++-
T Consensus 125 ~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq 165 (273)
T PF02353_consen 125 P-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQ 165 (273)
T ss_dssp ---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEE
T ss_pred C-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2 27887764 4443 23477888899998 998754
No 192
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.17 E-value=0.053 Score=46.52 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~ 267 (345)
++++.+|+-+|+|. |..++.+++.....+|++++.+++..+.++ +.+.+.+ .... .+..+ +. . .+.+|+
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~--~d~~~-~~-~-~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH--GRAEE-FG-Q-EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe--ccHhh-CC-C-CCCccE
Confidence 44588999999853 666666666554339999999988766654 3454432 1111 12211 11 1 348999
Q ss_pred EEEccCC--HHHHHHHHHHhccCCeEEEEec
Q 019139 268 SFECIGN--VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 268 v~d~~g~--~~~~~~~~~~l~~~~G~~v~~G 296 (345)
|+-.... +..+..+.+.|+++ |+++.+-
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 9864332 34577888999998 9998884
No 193
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.039 Score=48.30 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=51.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.++..+... ..|..+ .+.+.+.+.....+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 36899987 9999999888888899 8888888887776666555432 223333 123333222333337999999876
Q ss_pred C
Q 019139 274 N 274 (345)
Q Consensus 274 ~ 274 (345)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 4
No 194
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.14 E-value=0.068 Score=47.39 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcC--Cce-E--eCCCCCCccHHHHHHhh--cCCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG--VTE-F--VNPKDHDKPIQQVLVDL--TDGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g--~~~-~--i~~~~~~~~~~~~~~~~--~~gg 264 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+. .+. ... . .|..+ +..+...+... ..++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 3568999998 9999999999888999 7999999887655442 222 111 1 22222 12232222222 1237
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|++|.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 195
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.073 Score=47.59 Aligned_cols=79 Identities=18% Similarity=0.145 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTEF---VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~~---i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.++||+|+ |++|...++.+...|+ +++.+.+++++.+..++ .+.... .|..+ .+.+...+.+.. .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 3578999998 9999999988888999 78888887766544333 333221 22222 122222222221 247
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999883
No 196
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.092 Score=47.33 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.. .+.+.... +|..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999899999 899988877654322 22332221 23332 122333333322 23
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|+++.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 7899998775
No 197
>PRK14967 putative methyltransferase; Provisional
Probab=96.05 E-value=0.12 Score=45.54 Aligned_cols=99 Identities=22% Similarity=0.212 Sum_probs=64.6
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCC
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~g 263 (345)
....++++++||-.|+|. |.+++.+++. +..++++++.++...+.+++ .+....+... ++.+. +..+
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~---~~~~ 100 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARA---VEFR 100 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhh---ccCC
Confidence 344567889999999986 8888888875 55589999999987776543 3433222221 22221 2234
Q ss_pred CccEEEEccCC---------------------------HHHHHHHHHHhccCCeEEEEec
Q 019139 264 GVDYSFECIGN---------------------------VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 264 g~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~G 296 (345)
.+|+|+...+- ...+..+.+.|+++ |+++++-
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 79999865210 11345677889998 9998764
No 198
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.01 E-value=0.059 Score=46.83 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
.+.+|+|+|+|++|...++.+..+|..+++.+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 34789999999999999999999999899998876
No 199
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.01 E-value=0.11 Score=45.84 Aligned_cols=78 Identities=21% Similarity=0.261 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg 264 (345)
+.+++|+|+ |.+|...++.+...|+ .|+.+.+++++.+.+ +..+.... .|..+ +..+.+.+.+.. -++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence 468999998 9999999999889999 799998887764433 33343322 23332 122333333221 136
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|.++.+.|.
T Consensus 83 id~vi~~ag~ 92 (246)
T PRK05653 83 LDILVNNAGI 92 (246)
T ss_pred CCEEEECCCc
Confidence 8999998864
No 200
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.037 Score=49.43 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=52.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc-eE--eCCCCCCccHHHHHHhhc--C
Q 019139 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EF--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~-~~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
..+.+++|+|+ |++|...+..+...|+ +|+++.+++++.+.+.. .+.. .. .|..+ .+++.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 34689999998 9999999999999999 89999888877554422 1221 12 23322 123333333221 2
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|+++.+.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 478999999883
No 201
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.11 Score=47.10 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=48.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce----EeCCCCCCccHHHHHHhhc--CCCc
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE----FVNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~----~i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .+...+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899998 9999999999889999 788888877654433 2233321 234333 122222222221 2379
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 202
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.98 E-value=0.071 Score=47.72 Aligned_cols=78 Identities=26% Similarity=0.302 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH---hcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK---NFGVTEF---VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~---~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++...+..+ ..+.+.. .|..+ .++..+.+.+.. .++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999999999999 8888888754333333 2343321 23332 122233333322 247
Q ss_pred ccEEEEccC
Q 019139 265 VDYSFECIG 273 (345)
Q Consensus 265 ~d~v~d~~g 273 (345)
+|+++.+.|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999887
No 203
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.95 E-value=0.049 Score=50.84 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCce----EeCCCCCCccHHHHHHhhcCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLTDG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~----~i~~~~~~~~~~~~~~~~~~g 263 (345)
.|.+++|+|+ +++|...+..+...|+ +|+.+++++++.+.+. + .+... .+|..+...+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4789999998 9999998888888899 8999999988765442 1 22111 223332112233344444444
Q ss_pred -CccEEEEccC
Q 019139 264 -GVDYSFECIG 273 (345)
Q Consensus 264 -g~d~v~d~~g 273 (345)
.+|++++++|
T Consensus 131 ~didilVnnAG 141 (320)
T PLN02780 131 LDVGVLINNVG 141 (320)
T ss_pred CCccEEEEecC
Confidence 6779998876
No 204
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.94 E-value=0.038 Score=49.69 Aligned_cols=78 Identities=21% Similarity=0.232 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCce-E--eCCCCCCccHHHHHHhhcC--CCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-g~~~-~--i~~~~~~~~~~~~~~~~~~--gg~d 266 (345)
++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+++. +... . .|..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999998 9999999999999999 899988888776655443 3221 1 23322 1222333333221 4789
Q ss_pred EEEEccC
Q 019139 267 YSFECIG 273 (345)
Q Consensus 267 ~v~d~~g 273 (345)
+++.+.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999876
No 205
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.94 E-value=0.026 Score=49.52 Aligned_cols=103 Identities=19% Similarity=0.229 Sum_probs=66.4
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 260 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~ 260 (345)
+.+...++++++||-+|+| .|..++.+++..+. ..|++++.+++..+.++ ++|.+.+..... +..+.. .
T Consensus 69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~--~ 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW--E 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC--c
Confidence 4456678999999999986 37777788887653 26999999988776664 345432211111 111100 1
Q ss_pred cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139 261 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 295 (345)
..++||+|+-..........+.+.|+++ |++++.
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1237998886544445567788999998 998764
No 206
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.047 Score=49.01 Aligned_cols=81 Identities=22% Similarity=0.355 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-----cCCceE----eCCCCCCccHHHHHHhh
Q 019139 192 VEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF----VNPKDHDKPIQQVLVDL 260 (345)
Q Consensus 192 ~~~g~~VlI~Ga-g-~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-----~g~~~~----i~~~~~~~~~~~~~~~~ 260 (345)
+..+.+++|+|+ | ++|...++.+...|+ +|+++++++++.+...+ ++...+ .|..+ +.+..+.+...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 345789999987 6 799999999999999 78888887766544321 443322 23332 12222222222
Q ss_pred c--CCCccEEEEccCC
Q 019139 261 T--DGGVDYSFECIGN 274 (345)
Q Consensus 261 ~--~gg~d~v~d~~g~ 274 (345)
. .+++|+++.+.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 2478999999884
No 207
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.13 Score=46.13 Aligned_cols=77 Identities=23% Similarity=0.254 Sum_probs=50.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cC-Cc-e--EeCCCCCCccHHHHHHhhc---CCCcc
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FG-VT-E--FVNPKDHDKPIQQVLVDLT---DGGVD 266 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g-~~-~--~i~~~~~~~~~~~~~~~~~---~gg~d 266 (345)
.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ .+ .. . .+|..+ ..++.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 46899998 9999999998888999 89998888877665533 32 11 1 223333 122333333221 35899
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999874
No 208
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.045 Score=50.36 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC--ceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEF---VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~--~~~---i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+ ++++. ... .|..+ .++..+.+.+.. .++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999998 9999999999999999 899888888776544 44442 111 33333 122223332222 247
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|+++++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 209
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.039 Score=49.66 Aligned_cols=78 Identities=18% Similarity=0.204 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 263 (345)
++.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. ..+... + .|..+ +....+.+.+.. -+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4688999998 9999999999999999 8999888877654332 223221 1 23332 122222222221 14
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|++|.++|
T Consensus 87 ~id~vi~~Ag 96 (263)
T PRK07814 87 RLDIVVNNVG 96 (263)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 210
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.052 Score=48.45 Aligned_cols=73 Identities=16% Similarity=0.115 Sum_probs=49.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhcCCCcc
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLTDGGVD 266 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~~gg~d 266 (345)
+.++||+|+ |++|...++.+...|+ +|+++.++.++.+.+. ..+.... .|..+ .+.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-----AIDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-----HHHHHHHhcCCCC
Confidence 357999998 9999999999999999 8888888776554432 2232211 23222 1233333345899
Q ss_pred EEEEccC
Q 019139 267 YSFECIG 273 (345)
Q Consensus 267 ~v~d~~g 273 (345)
++|.+.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999887
No 211
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.035 Score=49.70 Aligned_cols=81 Identities=25% Similarity=0.249 Sum_probs=52.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCc--eE--eCCCCCCccHHHHHHhhc--CC
Q 019139 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT--EF--VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~--~~--i~~~~~~~~~~~~~~~~~--~g 263 (345)
.-++.+++|+|+ |++|...+..+...|+ +|+.+.++++..+.+.+ ..-. .. .|..+ +..+.+.+.+.. -+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERFG 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 346789999998 9999999999999999 79999888766554433 2211 11 23322 122222222221 14
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|++|.+.|.
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 212
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.89 E-value=0.031 Score=50.98 Aligned_cols=98 Identities=19% Similarity=0.193 Sum_probs=70.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC-
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG- 273 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g- 273 (345)
..+|.|+|.|.+|.-++.+|.-+|+ +|+..+.+.+|++.+..+....+--..+.+.++.+.+. +.|++|..+=
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLI 241 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLI 241 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEe
Confidence 3567888999999999999999999 99999999999998876544433222222233433333 5788887532
Q ss_pred ----CH-HHHHHHHHHhccCCeEEEEeccCC
Q 019139 274 ----NV-SVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 274 ----~~-~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
.+ -..++.++.++|+ +.++.+....
T Consensus 242 pgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred cCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 12 2357779999997 9999987644
No 213
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.88 E-value=0.048 Score=52.70 Aligned_cols=96 Identities=10% Similarity=0.065 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
-.+.+|+|+|+|+.|.+++..+...|+.+++++.++.++.+ ++.+++....+.+ +.+.+.. ..+|+||.|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHHh-ccCCEEEEC
Confidence 45789999999999999999999999878999999877644 4445542122211 1222221 259999999
Q ss_pred cCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 272 IGNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
++++..+-. .+.++...=.++.++.+
T Consensus 250 T~a~~~vi~-~~~~~~~~~~~iDLavP 275 (414)
T PRK13940 250 VNVLEYIVT-CKYVGDKPRVFIDISIP 275 (414)
T ss_pred cCCCCeeEC-HHHhCCCCeEEEEeCCC
Confidence 998653211 11222110246777763
No 214
>PRK06128 oxidoreductase; Provisional
Probab=95.88 E-value=0.093 Score=48.34 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=60.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--H----HHHHHhcCCceEe---CCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--K----FDRAKNFGVTEFV---NPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~----~~~~~~~g~~~~i---~~~~~~~~~~~~~~~~~-- 261 (345)
.+.++||+|+ |++|...+..+...|+ +|+.+.++.+ . .+.++..+....+ |..+ .....+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4678999998 9999999998888999 7776654322 1 1223334443222 3322 122222222221
Q ss_pred CCCccEEEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139 262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 262 ~gg~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
.+++|+++.+.|.. ..++.++..++.+ |+++.+++.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 24799999988731 1223344455676 899988764
No 215
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.052 Score=49.10 Aligned_cols=78 Identities=28% Similarity=0.331 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC-Cce-EeCCCCCCccHHHHHHhhc--CCCccEE
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG-VTE-FVNPKDHDKPIQQVLVDLT--DGGVDYS 268 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g-~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v 268 (345)
+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ +.++ ... ..|..+ ++++.+.+.... .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 568999998 9999999998888999 888888888776544 3344 221 123333 123333333222 2479999
Q ss_pred EEccCC
Q 019139 269 FECIGN 274 (345)
Q Consensus 269 ~d~~g~ 274 (345)
+.+.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999873
No 216
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.83 E-value=0.049 Score=48.94 Aligned_cols=78 Identities=22% Similarity=0.247 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCce-E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ ++... . .|..+ ..+..+.+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 4678999998 9999999999999999 89999888877665543 33211 1 22222 122223333221 24789
Q ss_pred EEEEccC
Q 019139 267 YSFECIG 273 (345)
Q Consensus 267 ~v~d~~g 273 (345)
+++.+.|
T Consensus 83 ~li~~ag 89 (263)
T PRK06200 83 CFVGNAG 89 (263)
T ss_pred EEEECCC
Confidence 9999887
No 217
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.048 Score=48.62 Aligned_cols=79 Identities=23% Similarity=0.251 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~--i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.++.+..+...++.... . .|..+ ..++.+.+.+.. .+++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999998 9999999998888999 8998888876555554432211 1 23322 122222222221 13789
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 218
>PRK06484 short chain dehydrogenase; Validated
Probab=95.80 E-value=0.1 Score=51.98 Aligned_cols=104 Identities=27% Similarity=0.367 Sum_probs=67.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
..+.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +++.... .|..+ +++..+.+.+.. .+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35788999998 9999999999999999 8999998887766554 3443322 23332 122333333322 1479
Q ss_pred cEEEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139 266 DYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 266 d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
|+++.+.|.. ...+.++..++.+ |+++.+++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~ 403 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIA 403 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchh
Confidence 9999988731 1133334455665 8999998643
No 219
>PRK09186 flagellin modification protein A; Provisional
Probab=95.78 E-value=0.13 Score=45.72 Aligned_cols=78 Identities=22% Similarity=0.420 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc----CCce----EeCCCCCCccHHHHHHhhcC-
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE----FVNPKDHDKPIQQVLVDLTD- 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~----g~~~----~i~~~~~~~~~~~~~~~~~~- 262 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+ ++++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 4678999998 9999999999999999 788888877665433 222 2221 223333 1233333333221
Q ss_pred -CCccEEEEccC
Q 019139 263 -GGVDYSFECIG 273 (345)
Q Consensus 263 -gg~d~v~d~~g 273 (345)
+++|+++.+.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 46899999875
No 220
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.061 Score=48.54 Aligned_cols=79 Identities=20% Similarity=0.306 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc----CCce---EeCCCCCCccHHHHHHhhc-CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE---FVNPKDHDKPIQQVLVDLT-DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~----g~~~---~i~~~~~~~~~~~~~~~~~-~g 263 (345)
.+.+++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++ +.+. ..|..+ +.+..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4678999998 9999999999999999 8999888877655432 11 3221 123332 122333333221 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998874
No 221
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.05 Score=49.43 Aligned_cols=78 Identities=23% Similarity=0.265 Sum_probs=51.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce----EeCCCCCCccHHHHHHhhcC--CCccE
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE----FVNPKDHDKPIQQVLVDLTD--GGVDY 267 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~----~i~~~~~~~~~~~~~~~~~~--gg~d~ 267 (345)
+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+.+..... ..|..+ ++.+.+.+..... +++|+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCCE
Confidence 568999998 9999999999888999 8999999888766554432221 123322 1222223332221 36899
Q ss_pred EEEccCC
Q 019139 268 SFECIGN 274 (345)
Q Consensus 268 v~d~~g~ 274 (345)
++.+.|.
T Consensus 82 vv~~ag~ 88 (277)
T PRK06180 82 LVNNAGY 88 (277)
T ss_pred EEECCCc
Confidence 9999885
No 222
>PRK09242 tropinone reductase; Provisional
Probab=95.77 E-value=0.18 Score=45.04 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h---c--CCceE---eCCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---F--GVTEF---VNPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~---~--g~~~~---i~~~~~~~~~~~~~~~~~-- 261 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+. + . +.+.. .|..+ ..++.+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4678999998 9999999999999999 8988888877654432 2 1 22221 23322 122222222221
Q ss_pred CCCccEEEEccCC
Q 019139 262 DGGVDYSFECIGN 274 (345)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (345)
-+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999874
No 223
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.76 E-value=0.055 Score=47.99 Aligned_cols=78 Identities=21% Similarity=0.372 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce---EeCCCCCCccHHHHHHhhcC--C
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~---~i~~~~~~~~~~~~~~~~~~--g 263 (345)
++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999999999 899988887665433 2334432 122222 1222233333222 3
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|++|.+.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 224
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.76 E-value=0.13 Score=47.71 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=59.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
+|+|+|+ |-+|...+..+...|+ +|++++++.++...+...+.+.+. |..+ +. .+.+... ++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~----~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PE----TLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HH----HHHHHHC-CCCEEEECCCC
Confidence 6899998 9999999999999999 899998887665554445554332 2222 11 2222222 68999998653
Q ss_pred HH------------HHHHHHHHhccC-CeEEEEeccC
Q 019139 275 VS------------VMRAALECCHKG-WGTSVIVGVA 298 (345)
Q Consensus 275 ~~------------~~~~~~~~l~~~-~G~~v~~G~~ 298 (345)
.. ....+++.++.. -.+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 11 113455555543 1378887763
No 225
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.76 E-value=0.024 Score=55.51 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=60.3
Q ss_pred hhcCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhc
Q 019139 188 NTAKVEPGSIVA----VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 188 ~~~~~~~g~~Vl----I~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~ 261 (345)
...+.++|+.++ |+|+ |++|.+++|+++..|+ .|+++.+...+....+..+.+ .++|... ..+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG--ITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC--CCCHHHHHHHH
Confidence 346677888877 7765 9999999999999999 888876555533333333443 2344333 12222222211
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139 262 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
..+...++.|.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 2366777888887 9999998753
No 226
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.75 E-value=0.054 Score=49.83 Aligned_cols=96 Identities=29% Similarity=0.456 Sum_probs=59.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeC-CCCCCccHHHHHHhhcCCCcc
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVN-PKDHDKPIQQVLVDLTDGGVD 266 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~-~~~~~~~~~~~~~~~~~gg~d 266 (345)
.+++++||=+|+| .|.+++..++ +|+++|++++.++...+.+++ .|....+. ... . +...++||
T Consensus 159 ~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~--~-------~~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS--E-------DLVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT--S-------CTCCS-EE
T ss_pred ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe--c-------ccccccCC
Confidence 5788899988875 2555555444 588899999999887666643 23222111 111 1 12225899
Q ss_pred EEEEccCCHHH---HHHHHHHhccCCeEEEEeccCC
Q 019139 267 YSFECIGNVSV---MRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 267 ~v~d~~g~~~~---~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
+|+-.+-.... ...+.+.++++ |.+++.|...
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 99988776542 34445568897 9999999864
No 227
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.75 E-value=0.16 Score=44.48 Aligned_cols=109 Identities=22% Similarity=0.205 Sum_probs=74.1
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcC
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~ 262 (345)
...+.+...+||=+|.+ +|..++.+|..+. -.+++.++.++++.+.++ +.|.+..+..... -+..+.+.+...
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~~~~ 130 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSRLLD 130 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHhccC
Confidence 34555677888888864 5888888888886 338999999999988775 4677663222110 134555555445
Q ss_pred CCccEEE-EccC--CHHHHHHHHHHhccCCeEEEEeccCC
Q 019139 263 GGVDYSF-ECIG--NVSVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 263 gg~d~v~-d~~g--~~~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
+.||+|| |+-- -+.-++.++++|++| |.++.=....
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~ 169 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF 169 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence 6899888 4433 345689999999997 8887655443
No 228
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.72 E-value=0.25 Score=42.47 Aligned_cols=106 Identities=22% Similarity=0.299 Sum_probs=63.5
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
+.....++++++|+=.|+| .|..++.+++......|++++.+++..+.+++ ++.+.+.... .+..+.+..+.
T Consensus 32 l~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~ 107 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQLA 107 (196)
T ss_pred HHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhCC
Confidence 3455567888988888875 35566666765533389999999988776653 4543321111 12222222222
Q ss_pred CCCcc-EEEEccCC-HHHHHHHHHHhccCCeEEEEecc
Q 019139 262 DGGVD-YSFECIGN-VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 262 ~gg~d-~v~d~~g~-~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
..+| ++++.... ...++.+.+.|+++ |++++.-.
T Consensus 108 -~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 -PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred -CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 2234 44443222 35578888999998 99887754
No 229
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.69 E-value=0.065 Score=47.54 Aligned_cols=79 Identities=20% Similarity=0.296 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~~~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+.+++. ..+.+++.+.... .|..+ ..++.+.+.+.. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999999889999 8888877652 2233344443221 23322 123333333222 1379
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 230
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.13 Score=46.64 Aligned_cols=78 Identities=18% Similarity=0.205 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCce-E--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d~ 267 (345)
+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ ++... . .|..+ ...+.+.+.... -+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 457999998 9999999988888898 89998888776654433 22211 1 22222 122222222221 247899
Q ss_pred EEEccCC
Q 019139 268 SFECIGN 274 (345)
Q Consensus 268 v~d~~g~ 274 (345)
++.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 231
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.67 E-value=0.061 Score=52.98 Aligned_cols=77 Identities=31% Similarity=0.410 Sum_probs=54.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHhcCCceEeCCCCCCcc
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDKP 252 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~---------------------~~~~~~~~~g~~~~i~~~~~~~~ 252 (345)
.+++|+|+|+|+.|+.++..++..|+ .|+.++..+ ...+.++++|.+..++..-. .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 57899999999999999999999999 788887653 24566788898765554221 11
Q ss_pred HHHHHHhhcCCCccEEEEccCCH
Q 019139 253 IQQVLVDLTDGGVDYSFECIGNV 275 (345)
Q Consensus 253 ~~~~~~~~~~gg~d~v~d~~g~~ 275 (345)
+ .+.++. ..+|.+|.++|..
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCC
Confidence 1 111111 2699999999974
No 232
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.069 Score=49.12 Aligned_cols=79 Identities=23% Similarity=0.322 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+. +.+.+. . .|..+ .+++.+.+.... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 3578999998 9999999998888999 8999999887655442 223322 1 23222 122222232221 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 233
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.64 E-value=0.25 Score=41.18 Aligned_cols=44 Identities=30% Similarity=0.424 Sum_probs=36.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 241 (345)
+|.++|.|..|...+.-+...|+ +|++.+++.++.+.+.+.|+.
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~ 46 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAE 46 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEE
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhh
Confidence 68899999999999988889999 899999999998888776643
No 234
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.63 E-value=0.32 Score=40.39 Aligned_cols=82 Identities=15% Similarity=0.208 Sum_probs=52.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
.|.+|+|+|+|.+|.--++.+...|+ +|++++ ++..+.+++++.-. .+.+. +. +..-.++|+|+-++.
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~----~~----~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT----FS----NDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc----cC----hhcCCCceEEEECCC
Confidence 46889999999999998888888999 788773 22223334444211 21111 10 001127899999998
Q ss_pred CHHHHHHHHHHhccC
Q 019139 274 NVSVMRAALECCHKG 288 (345)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (345)
++. ++..+..++..
T Consensus 80 d~e-~N~~i~~~a~~ 93 (157)
T PRK06719 80 QHA-VNMMVKQAAHD 93 (157)
T ss_pred CHH-HHHHHHHHHHH
Confidence 877 66666666553
No 235
>PRK06196 oxidoreductase; Provisional
Probab=95.62 E-value=0.076 Score=49.27 Aligned_cols=78 Identities=21% Similarity=0.231 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~--~gg~d~ 267 (345)
.+.+++|+|+ |++|...+..+...|+ +|+++.++.++.+.+ .++..-.. .|..+ ..+..+.+.+.. .+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4578999998 9999999998888999 888888887765443 22221112 23332 122223333322 247999
Q ss_pred EEEccC
Q 019139 268 SFECIG 273 (345)
Q Consensus 268 v~d~~g 273 (345)
++.+.|
T Consensus 103 li~nAg 108 (315)
T PRK06196 103 LINNAG 108 (315)
T ss_pred EEECCC
Confidence 999887
No 236
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.058 Score=48.17 Aligned_cols=79 Identities=20% Similarity=0.228 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+.+. ..+.... .|..+ ++.+.+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4688999998 9999999999999999 8988888877654432 2232211 23322 122333333221 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998773
No 237
>PRK06398 aldose dehydrogenase; Validated
Probab=95.60 E-value=0.09 Score=47.21 Aligned_cols=74 Identities=22% Similarity=0.284 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~--~gg~d~v~ 269 (345)
.+.++||+|+ |++|...+..+...|+ +|+.+++++.+.. ... ...|..+ +.++.+.+.+.. .+++|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 3678999998 9999999999999999 8888887765421 111 1123333 122333333322 23799999
Q ss_pred EccCC
Q 019139 270 ECIGN 274 (345)
Q Consensus 270 d~~g~ 274 (345)
.+.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98773
No 238
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.60 E-value=0.27 Score=44.58 Aligned_cols=102 Identities=23% Similarity=0.322 Sum_probs=59.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------HH----HHHHhcCCceEeC-CCCC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------KF----DRAKNFGVTEFVN-PKDH 249 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-------------------~~----~~~~~~g~~~~i~-~~~~ 249 (345)
.+.+|+|+|+|++|..++..+...|..+++.+|.+.- |. +.+.++.++--+. ..+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4578999999999999999999999878888875421 11 1122233221111 1110
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
-. .+.+.++....+|+|+||+.+...-..+.+.+....-.++.+|.
T Consensus 109 -i~-~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG 154 (268)
T PRK15116 109 -IT-PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG 154 (268)
T ss_pred -cC-hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 00 12223333347999999999865444455554443145555654
No 239
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.58 E-value=0.13 Score=47.65 Aligned_cols=91 Identities=21% Similarity=0.368 Sum_probs=61.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 196 ~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
.+|.|+|+|.+|...+..++..|. ..|+++++++++.+.+++.|....+. .+..+.+ ...|+|+.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence 579999999999999998888884 37999999999888888877532111 1111111 257899988876
Q ss_pred HHH---HHHHHHHhccCCeEEEEecc
Q 019139 275 VSV---MRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 275 ~~~---~~~~~~~l~~~~G~~v~~G~ 297 (345)
... +......++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 431 23333445665 66666664
No 240
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.56 E-value=0.24 Score=43.02 Aligned_cols=92 Identities=13% Similarity=0.048 Sum_probs=55.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~ 272 (345)
.+.+|+|+|+|.+|...+..+...|+ +|++++.... ....+...+.- .+.... +.+. .+ .++|+||-++
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i-~~~~~~----~~~~--~l--~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKI-RWKQKE----FEPS--DI--VDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCE-EEEecC----CChh--hc--CCceEEEEcC
Confidence 46799999999999999988888998 8888765321 21222122211 111111 1000 01 2689999999
Q ss_pred CCHHHHHHHHHHhccCCeEEEEecc
Q 019139 273 GNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+++. ++..+...+.. +.++.+..
T Consensus 79 ~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 79 NDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCHH-HHHHHHHHHHh-CCcEEECC
Confidence 9977 55655555554 55555543
No 241
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.54 E-value=0.072 Score=54.63 Aligned_cols=76 Identities=29% Similarity=0.346 Sum_probs=55.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHhcCCceEeCCCCC-Cc
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK 251 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~---------------------~~~~~~~~g~~~~i~~~~~-~~ 251 (345)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. ..+.++++|.+..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888887652 4567788888766554321 11
Q ss_pred cHHHHHHhhcCCCccEEEEccCCH
Q 019139 252 PIQQVLVDLTDGGVDYSFECIGNV 275 (345)
Q Consensus 252 ~~~~~~~~~~~gg~d~v~d~~g~~ 275 (345)
.+. ++. ..+|.+|.++|..
T Consensus 388 ~~~----~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCCC
Confidence 221 121 2699999999863
No 242
>PLN02366 spermidine synthase
Probab=95.54 E-value=0.1 Score=48.36 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCC---CccHHHHHHhhcCCCccE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDH---DKPIQQVLVDLTDGGVDY 267 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~~---~~~~~~~~~~~~~gg~d~ 267 (345)
.+.++||++|+|. |.++..+++.-+.++|++++.+++-.+.+++.-... -++.... ..+..+.+.+..++.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568899998865 556677777766668999999998888877642110 0111000 123334454443458998
Q ss_pred EEEccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139 268 SFECIGN----------VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 268 v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G 296 (345)
||--... ...++.+.+.|+++ |.++.-+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 8854332 23467888999998 9997643
No 243
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.2 Score=44.27 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=34.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~ 238 (345)
.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence 46899998 9999998888888999 899999988877666543
No 244
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.53 E-value=0.16 Score=45.55 Aligned_cols=103 Identities=19% Similarity=0.310 Sum_probs=60.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHH-Hhc-CCce---EeCCCCCCccHHHHHHhhcC
Q 019139 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNF-GVTE---FVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~---~~~~~~-~~~-g~~~---~i~~~~~~~~~~~~~~~~~~ 262 (345)
.+.+++|+|+ +++|.+.++.+...|+ +|+.+.++. ++.+.+ +++ +... ..|..+ +++..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4678999987 4999999988888999 788775542 333323 333 2211 123332 1233333333322
Q ss_pred --CCccEEEEccCCH-------H----------------------HHHHHHHHhccCCeEEEEeccCC
Q 019139 263 --GGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 263 --gg~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
+++|+++.+.|.. . ..+.++..++++ |+++.+++..
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~~ 150 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYLG 150 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEcccC
Confidence 5799999887621 0 112344556676 9999988654
No 245
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.51 E-value=0.24 Score=43.35 Aligned_cols=101 Identities=21% Similarity=0.229 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEeCC-------CCCCcc-HHHHHHhhc--
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNP-------KDHDKP-IQQVLVDLT-- 261 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i~~-------~~~~~~-~~~~~~~~~-- 261 (345)
.++.+||+.|+| .|.-++.+|. .|+ +|++++.++...+.+ ++.+....... .....+ ....+.++.
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 567899999997 4777777775 799 999999999988764 33333211100 000000 000111111
Q ss_pred -CCCccEEEEccCC--------HHHHHHHHHHhccCCeEEEEecc
Q 019139 262 -DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 262 -~gg~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.+.+|.++|+..- ...++.+.++|+|+ |++++++.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 2368999997531 23477888999998 98777655
No 246
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.077 Score=47.11 Aligned_cols=79 Identities=28% Similarity=0.341 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-H---hcCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE---FVNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~---~~g~~~---~i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ + +.+... ..|..+ .....+...+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4578999998 9999999998888999 899998887654333 2 222221 123322 122222222221 13
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998883
No 247
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.091 Score=47.19 Aligned_cols=79 Identities=23% Similarity=0.336 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc--CCce-E--eCCCCCCccHHHHHHhhc-CCCc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVTE-F--VNPKDHDKPIQQVLVDLT-DGGV 265 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~--g~~~-~--i~~~~~~~~~~~~~~~~~-~gg~ 265 (345)
++.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++ +... . .|..+ .....+...... .+++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 3578999988 9999999998888999 8999988887665443 22 2111 1 12222 112222211111 2478
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998874
No 248
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.50 E-value=0.067 Score=46.20 Aligned_cols=98 Identities=18% Similarity=0.287 Sum_probs=60.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCC
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~g 263 (345)
+.....++.+||-+|+|. |..+..+|+. |. +|++++.+++-.+.+++ .+...+ .... .++.+. .+ .+
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~~~~--~~-~~ 94 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDLNNL--TF-DG 94 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cChhhC--Cc-CC
Confidence 334455678899999874 7777888775 77 89999999987666543 232211 1110 111110 11 23
Q ss_pred CccEEEEccC----C----HHHHHHHHHHhccCCeEEEEe
Q 019139 264 GVDYSFECIG----N----VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 264 g~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~ 295 (345)
.+|+|+.... . ...+..+.+.|+++ |.++++
T Consensus 95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~ 133 (197)
T PRK11207 95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV 133 (197)
T ss_pred CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 7999987533 1 23466777889998 996544
No 249
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.49 E-value=0.36 Score=43.92 Aligned_cols=103 Identities=14% Similarity=0.263 Sum_probs=63.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHH-HHhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDR-AKNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~---~~~~-~~~~g~~~~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|+ +++|.+.++.+...|+ +|+.+.++++ +.+. .++++.... .|..+ .+...+.+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 3678999987 4899999998888999 8888877742 2222 234453322 33333 122333333322 2
Q ss_pred CCccEEEEccCCH-----------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139 263 GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 263 gg~d~v~d~~g~~-----------------------------~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
+++|+++.+.|.. ...+.++..+..+ |+++.+++..
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~ 146 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG 146 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence 4799999998731 1234455566776 9999887643
No 250
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.46 E-value=0.13 Score=45.74 Aligned_cols=104 Identities=25% Similarity=0.287 Sum_probs=73.2
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 260 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~ 260 (345)
+....++++|++|+=.|.| .|.+++-+|++.|. .+|+..+..++..+.|+ ++|....+.... ..+.+.
T Consensus 86 I~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~------~Dv~~~ 158 (256)
T COG2519 86 IVARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL------GDVREG 158 (256)
T ss_pred HHHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe------cccccc
Confidence 3467889999999988876 48888899988774 68999999998887774 345444222211 112222
Q ss_pred cCC-CccEEE-EccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 261 TDG-GVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 261 ~~g-g~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
..+ .+|++| |.--.-..++.+.+.|+++ |+++++--
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 223 788655 6655557799999999998 99988753
No 251
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.46 E-value=0.13 Score=45.66 Aligned_cols=78 Identities=24% Similarity=0.331 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~---~i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+. ..+... ..|..+ +.++.+.+.... .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999998 9999999998888999 8888888877654332 223221 123322 122222222221 23
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|++|.+.+
T Consensus 81 ~~d~vi~~a~ 90 (258)
T PRK12429 81 GVDILVNNAG 90 (258)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 252
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.45 E-value=0.16 Score=42.74 Aligned_cols=77 Identities=19% Similarity=0.245 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139 192 VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (345)
Q Consensus 192 ~~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d 270 (345)
--.+.+|+|+|+|. +|..++..++..|+ +|+.+.+..+ +..+.+. .+|+||.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------~l~~~l~-----~aDiVIs 93 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------NLKEHTK-----QADIVIV 93 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------hHHHHHh-----hCCEEEE
Confidence 35789999999986 59989999999999 7887766521 1222222 4899999
Q ss_pred ccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 271 CIGNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
+++.+..+.. +.++++ -.++.++.+
T Consensus 94 at~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 94 AVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred cCCCCceecH--HHccCC-eEEEEccCC
Confidence 9998764333 356776 788888874
No 253
>PRK00811 spermidine synthase; Provisional
Probab=95.45 E-value=0.12 Score=47.47 Aligned_cols=101 Identities=12% Similarity=0.096 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce---EeCCCC---CCccHHHHHHhhcCCCcc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE---FVNPKD---HDKPIQQVLVDLTDGGVD 266 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~---~i~~~~---~~~~~~~~~~~~~~gg~d 266 (345)
.+.++||++|+|. |..+..+++..+.++|++++.+++-.+.+++.-... ..+..+ ...+..+.+.. ..+.+|
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~yD 152 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAE-TENSFD 152 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhh-CCCccc
Confidence 3467899998864 666777777767779999999999888887632110 000000 00233334433 345899
Q ss_pred EEEEccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139 267 YSFECIGN----------VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 267 ~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G 296 (345)
+|+--... ...++.+.+.|+++ |.++.-.
T Consensus 153 vIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 153 VIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred EEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 88854321 22356778899998 9988753
No 254
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=95.45 E-value=0.15 Score=42.26 Aligned_cols=73 Identities=25% Similarity=0.331 Sum_probs=50.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC----CccHHHHHHhhcCC-CccEEE
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDG-GVDYSF 269 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~----~~~~~~~~~~~~~g-g~d~v~ 269 (345)
.+|+|.|. |.+|.+.+++.|+.++ -|.-++.++.. +.....+++.+.. ++...+.+.+...+ ++|.||
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe-----~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENE-----QADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccc-----cccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 57899988 9999999999999999 78888776543 2233344443321 12233444455556 999999
Q ss_pred EccCC
Q 019139 270 ECIGN 274 (345)
Q Consensus 270 d~~g~ 274 (345)
...|+
T Consensus 78 CVAGG 82 (236)
T KOG4022|consen 78 CVAGG 82 (236)
T ss_pred Eeecc
Confidence 98774
No 255
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.44 E-value=0.14 Score=46.88 Aligned_cols=100 Identities=25% Similarity=0.384 Sum_probs=63.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~ 267 (345)
.+++.+|+=+|+| .|.+++.. +.+|+.+|+++|.++-..+.+++ .+.+....... ........++.+|+
T Consensus 160 ~~~g~~vlDvGcG-SGILaIAa-~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~-----~~~~~~~~~~~~Dv 232 (300)
T COG2264 160 LKKGKTVLDVGCG-SGILAIAA-AKLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKG-----FLLLEVPENGPFDV 232 (300)
T ss_pred hcCCCEEEEecCC-hhHHHHHH-HHcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhccc-----ccchhhcccCcccE
Confidence 5688999989985 36666554 45677789999999877666653 23332110000 00111122348999
Q ss_pred EEEccCCH---HHHHHHHHHhccCCeEEEEeccCC
Q 019139 268 SFECIGNV---SVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 268 v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
|+-.+=.. ...+...+.++|+ |++++.|...
T Consensus 233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 99776443 2356666788997 9999999764
No 256
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.42 E-value=0.16 Score=44.89 Aligned_cols=104 Identities=25% Similarity=0.280 Sum_probs=62.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh------hHHHHH-----------------HhcCCceEeCCCCCC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP------KKFDRA-----------------KNFGVTEFVNPKDHD 250 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~------~~~~~~-----------------~~~g~~~~i~~~~~~ 250 (345)
+..+|+|+|.|++|.+++..+.+.|..++..++-++ .|+-.+ +...+.--+...+ .
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-~ 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-D 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH-h
Confidence 357899999999999999999999998888876433 111111 1111111111111 0
Q ss_pred ccHHHHHHhhcCCCccEEEEccCCHHH-HHHHHHHhccCCeEEEEeccCC
Q 019139 251 KPIQQVLVDLTDGGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 251 ~~~~~~~~~~~~gg~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
.-..+.+.++...++|+|+|++-+-.+ +..+..+.+.+ -.++.++..+
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 111344556666699999999887553 23333455665 5666666533
No 257
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.41 E-value=0.39 Score=44.08 Aligned_cols=111 Identities=20% Similarity=0.233 Sum_probs=71.5
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHhcCCceEeCCCCCC--ccHH--------
Q 019139 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKDHD--KPIQ-------- 254 (345)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~--~~~~~~~~~~~~g~~~~i~~~~~~--~~~~-------- 254 (345)
...+.+++|++|+=--+|.+|...+.+|+.+|++-+++.. -+.+|+++++.+|++.+....... ....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~ 133 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAA 133 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHH
Confidence 3567799999554434599999999999999995455543 467889999999998776554210 0001
Q ss_pred --------------------------HHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 255 --------------------------QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 255 --------------------------~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.++.+-+.+.+|.++-.+|+.-++.-..+.|+.....+-+++.
T Consensus 134 ~~p~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~v 202 (300)
T COG0031 134 EIPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAV 202 (300)
T ss_pred hCCCceEchhhcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEE
Confidence 1222223346888888888777677777776643233444443
No 258
>PRK07985 oxidoreductase; Provisional
Probab=95.38 E-value=0.2 Score=45.97 Aligned_cols=102 Identities=18% Similarity=0.154 Sum_probs=60.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~-- 261 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.++. ++.+.+ ++.+.... .|..+ .++..+.+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4578999998 9999999999999999 787765432 222222 23343221 23332 122333333322
Q ss_pred CCCccEEEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139 262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 262 ~gg~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
.+++|+++.+.|.. ..++.++..++.+ |+++.+++.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 24789999887631 1223444455676 899988764
No 259
>PRK06484 short chain dehydrogenase; Validated
Probab=95.38 E-value=0.18 Score=50.27 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce---EeCCCCCCccHHHHHHhhc--CCCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~---~i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
.+.+++|+|+ +++|...++.+...|+ +|+.+.++.++.+.+ ++++... .+|..+ ++++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999998 9999999999999999 899988888775544 4455432 233332 123333333322 24799
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998773
No 260
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.36 E-value=0.12 Score=45.46 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhcCCceE-eCCCCCCccHHHHHHhhcC--CCccEEE
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 269 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~--gg~d~v~ 269 (345)
+.++||+|+ |++|...++.+...|+ +|+.++++++. .+.++..+...+ .|..+ .++..+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 357999998 9999999999888999 88888876543 333444553221 23322 1233333333222 3689999
Q ss_pred EccCC
Q 019139 270 ECIGN 274 (345)
Q Consensus 270 d~~g~ 274 (345)
.+.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98873
No 261
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.34 E-value=0.11 Score=39.88 Aligned_cols=94 Identities=22% Similarity=0.227 Sum_probs=58.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
.+.+|||+|+|.+|..-++.+...|+ +|+++.... +..+ +.-... .+ .+. .+ -.++++||-+.+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~----~~~---~~--l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RR----EFE---ED--LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ES----S-G---GG--CTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hh----hHH---HH--HhhheEEEecCC
Confidence 46889999999999999999999999 898887765 2122 111111 11 121 11 127999999999
Q ss_pred CHHHHHHHHHHhccCCeEEEEeccCCCCCce
Q 019139 274 NVSVMRAALECCHKGWGTSVIVGVAASGQEI 304 (345)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~ 304 (345)
.+..-.......+.. |.++.....+...++
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF 99 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELCDF 99 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCCSE
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCCeE
Confidence 877555555666655 777777654433333
No 262
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.33 E-value=0.35 Score=42.12 Aligned_cols=114 Identities=18% Similarity=0.086 Sum_probs=66.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~ 272 (345)
.|.+|+|+|+|.+|..-++.+...|+ +|++++.... ....+.+.|- ..+...+. . .+. + .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~-i~~~~~~~--~-~~d---l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGG-ITWLARCF--D-ADI---L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCC-EEEEeCCC--C-HHH---h--CCcEEEEECC
Confidence 36799999999999999999999999 8888765432 2333333332 12222221 1 111 1 3799999999
Q ss_pred CCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc--ccEEEEe
Q 019139 273 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT--GRVWKGT 320 (345)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~--~~~i~g~ 320 (345)
+.+..-.......+.. |..+.+-......++-++ ..+. +++|-=|
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~p--a~~~~g~l~iais 124 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFP--SIVDRSPVVVAIS 124 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEe--eEEEcCCEEEEEE
Confidence 9876455555555564 666654432333333333 3333 5665333
No 263
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.13 Score=46.09 Aligned_cols=81 Identities=23% Similarity=0.286 Sum_probs=49.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhH-HHH----HHhcCCc--eE--eCCCCCCccHHHHHHhh
Q 019139 192 VEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKK-FDR----AKNFGVT--EF--VNPKDHDKPIQQVLVDL 260 (345)
Q Consensus 192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~-~~~----~~~~g~~--~~--i~~~~~~~~~~~~~~~~ 260 (345)
+..+.+|+|+|+ |++|...++-+... |+ +|+.+++++++ .+. ++..+.. .+ .|..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456788999998 99999988876666 47 88888887664 332 2333321 12 23332 12222233332
Q ss_pred cC-CCccEEEEccCC
Q 019139 261 TD-GGVDYSFECIGN 274 (345)
Q Consensus 261 ~~-gg~d~v~d~~g~ 274 (345)
.. +++|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 489998887764
No 264
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.32 E-value=0.083 Score=48.27 Aligned_cols=45 Identities=24% Similarity=0.335 Sum_probs=39.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~ 237 (345)
.++.+++|.|+|+.+.+++..++..|+.+|+++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 357999999999999999999999998799999998888665543
No 265
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.1 Score=46.66 Aligned_cols=77 Identities=16% Similarity=0.159 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCC--c-eE--eCCCCCCccHHHHHHhhc--CCCc
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV--T-EF--VNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~--~-~~--i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ +.. + .. .|..+ .+++.+.+.+.. .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 358999998 9999999998888999 89999988877654432 221 1 11 23322 123333333322 1368
Q ss_pred cEEEEccC
Q 019139 266 DYSFECIG 273 (345)
Q Consensus 266 d~v~d~~g 273 (345)
|+++.+.|
T Consensus 80 d~lv~~ag 87 (257)
T PRK07024 80 DVVIANAG 87 (257)
T ss_pred CEEEECCC
Confidence 99999877
No 266
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.097 Score=46.37 Aligned_cols=79 Identities=25% Similarity=0.319 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++.... .|..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3678999998 9999999999999999 899998887665433 34554322 22222 112222222221 24789
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998873
No 267
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.09 Score=46.91 Aligned_cols=79 Identities=20% Similarity=0.285 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+.+++++.+.+ +..+.+.. .|..+ ++...+.+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 3578999998 9999999999889999 888888887765543 22343322 13322 122222222221 13
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 268
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.28 E-value=0.1 Score=46.64 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v 268 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+ +++..+.++..+...+ .|..+ +.+..+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 3678999998 9999999999888999 6766544 3444444443333221 23332 122333333322 2479999
Q ss_pred EEccCC
Q 019139 269 FECIGN 274 (345)
Q Consensus 269 ~d~~g~ 274 (345)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 269
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.26 E-value=0.098 Score=46.71 Aligned_cols=79 Identities=29% Similarity=0.389 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..|.... .|..+ ...+.+.+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4689999998 9999999998888999 899888887654432 22333221 23332 122333333222 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|++|.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 270
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.087 Score=47.32 Aligned_cols=79 Identities=25% Similarity=0.326 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----h-cCCceE----eCCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-FGVTEF----VNPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~-~g~~~~----i~~~~~~~~~~~~~~~~~-- 261 (345)
.+.+++|+|+ +++|...++.+...|+ +|+.+.+++++.+.+. + .+...+ .|..+ .++..+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4678999998 9999999999999999 8998888877654332 1 111121 23333 122222232222
Q ss_pred CCCccEEEEccCC
Q 019139 262 DGGVDYSFECIGN 274 (345)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (345)
.+++|+++.++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999883
No 271
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.3 Score=43.10 Aligned_cols=102 Identities=19% Similarity=0.221 Sum_probs=59.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~----~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~ 262 (345)
++.+++|+|+ |++|...+..+...|+ +++.+.++.. +.+ .++..+.... .|..+ ..++.+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4678999998 9999999999999999 6666555432 222 2223333211 12222 122222222221 2
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139 263 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 263 gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
+++|++|.+.|.. ..++.+++.++.+ |+++.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 4789999988731 1123344455675 899988764
No 272
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.23 E-value=0.3 Score=45.71 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHH-HHcCCCeEEEEcCChhHHHHHH-h----cCCceEeCCCCCCccHHHHHHhhcCCCcc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGA-KAAGASRVIGIDIDPKKFDRAK-N----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 266 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a-~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d 266 (345)
+...+++|+|+|..|...+..+ ...+.++|.+++++.++.+.+. + ++.+ +.... +..+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHHHH-----hcCC
Confidence 4567899999999998776544 4678889999999988765443 2 3432 21122 233333 2589
Q ss_pred EEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh
Q 019139 267 YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP 308 (345)
Q Consensus 267 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~ 308 (345)
+|+.++++...+- . ..+++| -++..+|.+. +...++++
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~-p~~~E~~~ 232 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM-PDMQELPS 232 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC-cccccCCH
Confidence 9999988765333 3 888997 8999999854 34556666
No 273
>PRK08317 hypothetical protein; Provisional
Probab=95.23 E-value=0.27 Score=43.14 Aligned_cols=104 Identities=24% Similarity=0.312 Sum_probs=68.5
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhh
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDL 260 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~ 260 (345)
+.+...+.++++||-+|+|. |..+..+++..+ ..++++++.++...+.+++. +....+...+ ..+ ..+
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d----~~~--~~~ 83 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD----ADG--LPF 83 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc----ccc--CCC
Confidence 34567788999999999975 888889988873 33899999999888877654 1111111111 000 012
Q ss_pred cCCCccEEEEcc-----CC-HHHHHHHHHHhccCCeEEEEecc
Q 019139 261 TDGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 261 ~~gg~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
..+.+|+|+..- .. ...+..+.+.|+++ |.+++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 234788877532 22 34578888999998 99987753
No 274
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.23 E-value=0.091 Score=46.96 Aligned_cols=78 Identities=19% Similarity=0.343 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~--~~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
.+.+++|+|+ +++|.+.++.+...|+ +|+.+.+++.. .+.+++.+.+.. .|..+ .++..+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999999999999 78877665421 223344443321 23333 123333333221 2479
Q ss_pred cEEEEccC
Q 019139 266 DYSFECIG 273 (345)
Q Consensus 266 d~v~d~~g 273 (345)
|+++.+.|
T Consensus 85 D~lv~~ag 92 (251)
T PRK12481 85 DILINNAG 92 (251)
T ss_pred CEEEECCC
Confidence 99999887
No 275
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.22 E-value=0.097 Score=44.27 Aligned_cols=94 Identities=23% Similarity=0.304 Sum_probs=61.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~ 275 (345)
+|.|+|+ |-+|...++=|+..|. .|+++.++.+|....+.. .+...+ -.+.......+ .++|+||++.+..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~----~i~q~D-ifd~~~~a~~l--~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV----TILQKD-IFDLTSLASDL--AGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc----eeeccc-ccChhhhHhhh--cCCceEEEeccCC
Confidence 5788898 9999999999999999 899999999886543211 111111 01111111111 2899999988753
Q ss_pred ---------HHHHHHHHHhcc-CCeEEEEeccC
Q 019139 276 ---------SVMRAALECCHK-GWGTSVIVGVA 298 (345)
Q Consensus 276 ---------~~~~~~~~~l~~-~~G~~v~~G~~ 298 (345)
...+.++..|+. +--|+.++|..
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 234556777776 22589999874
No 276
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.20 E-value=0.14 Score=45.81 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+.+..+ |..+ ...+.+.+.... .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999998 9999999999999999 788888887654332 334443222 2222 122222222211 13
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 277
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.19 E-value=0.21 Score=43.24 Aligned_cols=82 Identities=30% Similarity=0.394 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
-.|.+++|+|.|.+|..+++.+...|+ +|++++.+.++.+.++ .+|+. .++..+ +....+|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----------l~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----------IYSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----------hccccCCEEEec
Confidence 356899999999999999999999999 8999999888766654 34643 332211 111257888855
Q ss_pred cCCHHHHHHHHHHhcc
Q 019139 272 IGNVSVMRAALECCHK 287 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~ 287 (345)
......-...++.|+.
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 4433333444555644
No 278
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.11 Score=47.32 Aligned_cols=78 Identities=24% Similarity=0.334 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+ +..+.+.. .|..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999999999 788888877655433 22343221 23322 122222222221 24
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|+++.+.|
T Consensus 83 ~id~li~nAg 92 (275)
T PRK05876 83 HVDVVFSNAG 92 (275)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 279
>PRK08589 short chain dehydrogenase; Validated
Probab=95.19 E-value=0.099 Score=47.35 Aligned_cols=79 Identities=22% Similarity=0.322 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCce---EeCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.++||+|+ +++|...++.+...|+ +|+.++++++..+.+.+ .+... .+|..+ +.+....+.+.. .++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999998888999 89888887433333322 23221 123332 122222233222 247
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|+++.+.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998773
No 280
>PLN02476 O-methyltransferase
Probab=95.17 E-value=0.17 Score=46.11 Aligned_cols=107 Identities=18% Similarity=0.178 Sum_probs=69.2
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhc
Q 019139 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
....+..+..+||=+|.+ +|..++.+|+.++ -..|+.++.+++..+.++ +.|...-+.... .+..+.+.++.
T Consensus 111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~ 187 (278)
T PLN02476 111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMI 187 (278)
T ss_pred HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHH
Confidence 344556677899999874 4777777887764 226999999998877774 456653333222 23444444432
Q ss_pred ----CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139 262 ----DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 262 ----~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.+.||.||--... ...++.+++.|++| |.++.=..
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNv 229 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNV 229 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecC
Confidence 2479987744332 24477888999997 98876544
No 281
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.12 Score=47.90 Aligned_cols=78 Identities=21% Similarity=0.155 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cC-Cce---EeCCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FG-VTE---FVNPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g-~~~---~i~~~~~~~~~~~~~~~~~-- 261 (345)
.+.+++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+. + .+ ... .+|..+ ..+..+.+.++.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 3678999998 9999999998888999 8888888876644332 1 11 111 123333 122222222222
Q ss_pred CCCccEEEEccC
Q 019139 262 DGGVDYSFECIG 273 (345)
Q Consensus 262 ~gg~d~v~d~~g 273 (345)
.+++|+++.+.|
T Consensus 91 ~~~iD~li~nAG 102 (313)
T PRK05854 91 GRPIHLLINNAG 102 (313)
T ss_pred CCCccEEEECCc
Confidence 237899999877
No 282
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.11 Score=46.23 Aligned_cols=79 Identities=22% Similarity=0.234 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h---cCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE---FVNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~---~g~~~---~i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+. + .+... ..|..+ ++.+...+.+.. -+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999889999 8999888876654332 2 23221 223322 122322232221 14
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
.+|+++.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 78999998873
No 283
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.15 E-value=0.23 Score=44.35 Aligned_cols=100 Identities=19% Similarity=0.137 Sum_probs=59.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc--CCceE-eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF--GVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~--g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~ 269 (345)
.+.+|+|+|+ |.+|...++.+...|+ +|+++.++.++....... ++..+ .|..+ . .+.+.+....++|++|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~-~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G-SDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C-HHHHHHHhhcCCCEEE
Confidence 3578999998 9999999998888898 898888877664332211 12211 23322 1 1222222222689999
Q ss_pred EccCCHH-------------HHHHHHHHhccC-CeEEEEeccC
Q 019139 270 ECIGNVS-------------VMRAALECCHKG-WGTSVIVGVA 298 (345)
Q Consensus 270 d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~G~~ 298 (345)
.+.|... ....+++.+... .++++.++..
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8876421 134445555432 2688887753
No 284
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.14 Score=45.14 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 263 (345)
...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+. +.+... . .|..+ ..++...+.+.. .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4568999998 9999999999999999 8999998877654432 223222 1 22222 122222233222 13
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 285
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.13 E-value=0.17 Score=44.89 Aligned_cols=101 Identities=25% Similarity=0.299 Sum_probs=59.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHhcCCceEeCCCCCCc
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTEFVNPKDHDK 251 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-------------------~----~~~~~~~g~~~~i~~~~~~~ 251 (345)
+.+|+|+|+|++|..++..+.+.|..+++.+|.+.- | .+.++++..+.-+...+ .
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--~ 88 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--E 88 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee--e
Confidence 467999999999999999999999988988875431 1 11122333322221111 1
Q ss_pred cH-HHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 252 PI-QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 252 ~~-~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.+ .+...++....+|+|+||+.+...-..+.+.+....-.++..+.
T Consensus 89 ~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g 135 (231)
T cd00755 89 FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMG 135 (231)
T ss_pred ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeC
Confidence 11 12233333347999999999876544455554443134444443
No 286
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.085 Score=46.59 Aligned_cols=80 Identities=25% Similarity=0.325 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC-c---eEeCCCCC-CccH---HHHHHhh
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV-T---EFVNPKDH-DKPI---QQVLVDL 260 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~-~---~~i~~~~~-~~~~---~~~~~~~ 260 (345)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+. + ..+|..+. ..++ .+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3578999998 9999999998888999 8999998887655432 2221 1 11222210 1122 2233333
Q ss_pred cCCCccEEEEccCC
Q 019139 261 TDGGVDYSFECIGN 274 (345)
Q Consensus 261 ~~gg~d~v~d~~g~ 274 (345)
..+.+|+++.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33578999998883
No 287
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.12 E-value=0.26 Score=43.57 Aligned_cols=96 Identities=24% Similarity=0.281 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~d 270 (345)
-+|.+||=+|+|+ |+++.-+| .+|+ .|+++|.+++..+.++.-....- +++.. ...+.+... ++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~---~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ---ATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh---hhHHHHHhc-CCCccEEEE
Confidence 4788899999853 45554444 4678 99999999999998874322222 33432 222333221 148999986
Q ss_pred -----ccCCHH-HHHHHHHHhccCCeEEEEec
Q 019139 271 -----CIGNVS-VMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 271 -----~~g~~~-~~~~~~~~l~~~~G~~v~~G 296 (345)
.+..+. .+..+.++++|+ |.+++.-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 355544 467888999998 9887653
No 288
>PRK04457 spermidine synthase; Provisional
Probab=95.12 E-value=0.28 Score=44.44 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCc---eEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT---EFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-g~~---~~i~~~~~~~~~~~~~~~~~~gg~d~v 268 (345)
.+..+||++|+|+ |.++..+++.....++++++.+++-.+.+++. +.. .-+.... .+..+.+... .+.+|+|
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~--~Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE--ADGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE--CCHHHHHHhC-CCCCCEE
Confidence 4557899999864 77888888877544899999999999888764 221 1111111 2344444432 3479987
Q ss_pred E-EccCC---------HHHHHHHHHHhccCCeEEEE
Q 019139 269 F-ECIGN---------VSVMRAALECCHKGWGTSVI 294 (345)
Q Consensus 269 ~-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 294 (345)
+ |...+ ...++.+.+.|+++ |.+++
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 7 43221 35578888999998 99886
No 289
>PRK00536 speE spermidine synthase; Provisional
Probab=95.12 E-value=0.096 Score=47.31 Aligned_cols=101 Identities=13% Similarity=-0.040 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEE-Ec
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF-EC 271 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~-d~ 271 (345)
.+.++|||+|+|- |..+-.++|.- ++|+.++-+++-.+.++++-....--.++....+...+.+...+.+|+|| |+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 4458999997643 44556777765 38999999999888888742221101111112222233333335899766 65
Q ss_pred cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+-++.-.+.+.++|+++ |.++.-+.
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCC
Confidence 66666678889999998 98876543
No 290
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.12 Score=46.26 Aligned_cols=79 Identities=23% Similarity=0.286 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc-----CCce-E--eCCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~-----g~~~-~--i~~~~~~~~~~~~~~~~~-- 261 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++ +... . .|..+ ++++...+....
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 3678999998 9999999999999999 8888888877654332 22 2211 1 23322 122333332221
Q ss_pred CCCccEEEEccCC
Q 019139 262 DGGVDYSFECIGN 274 (345)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (345)
.+++|+++.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999998873
No 291
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.09 E-value=0.3 Score=43.16 Aligned_cols=93 Identities=18% Similarity=0.199 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhH--------HHHHHhcCCceEeCCCCCCccHHHHHH
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~--~vi~~~~~----~~~--------~~~~~~~g~~~~i~~~~~~~~~~~~~~ 258 (345)
-.+.+++|+|+|+.|..++..+...|.. +++.++++ +++ .++++.++... . + .++.+.+.
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~--~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G--GTLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c--CCHHHHHh
Confidence 4567999999999999999999999997 89999988 343 33444443211 0 0 12333332
Q ss_pred hhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
++|++|.+++....-...++.++++ ..++.+..
T Consensus 97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsn 129 (226)
T cd05311 97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALAN 129 (226)
T ss_pred -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCC
Confidence 4899999987322124666777775 66555543
No 292
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.12 Score=46.26 Aligned_cols=77 Identities=18% Similarity=0.289 Sum_probs=49.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+.... .|..+ ...+.+.+.... -+++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGGI 79 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 57899998 9999999999999999 899998887654432 23343222 12222 122333333221 1378
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|+++.+.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999873
No 293
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.08 E-value=0.11 Score=47.22 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=53.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCc------eEeCCCCC--CccHHHHHHh
Q 019139 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT------EFVNPKDH--DKPIQQVLVD 259 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~------~~i~~~~~--~~~~~~~~~~ 259 (345)
-.+.+++|+|+ .++|.+.+..+...|+ +|+.+.+++++.+..+ ..+.. ...|..+. .....+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 45788999988 8999999999999999 8999889888755443 22222 12233221 1122233333
Q ss_pred hcCCCccEEEEccCC
Q 019139 260 LTDGGVDYSFECIGN 274 (345)
Q Consensus 260 ~~~gg~d~v~d~~g~ 274 (345)
...|++|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 445689999998874
No 294
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.07 E-value=0.11 Score=53.51 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHhcCCceEeCCCCC-C
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D 250 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~---------------------~~~~~~~~g~~~~i~~~~~-~ 250 (345)
..+.+|+|+|+|+.|+.++..++..|+ +|+++++.+. ..+.++++|.+...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 7988887532 3455677787544433210 1
Q ss_pred ccHHHHHHhhcCCCccEEEEccCC
Q 019139 251 KPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 251 ~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
..+. .+. ..+|.+|.++|.
T Consensus 404 i~~~-~~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLE-SLL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHH-HHH----hcCCEEEEeCCC
Confidence 1111 111 268999998885
No 295
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.074 Score=47.92 Aligned_cols=77 Identities=26% Similarity=0.349 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~ 269 (345)
.+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.. .+... ..|..+ ++++.+.+.... .+.+|+++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD-DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence 3568999998 9999999998888999 899988876654322 12221 123322 233333333322 24789999
Q ss_pred EccCC
Q 019139 270 ECIGN 274 (345)
Q Consensus 270 d~~g~ 274 (345)
.+.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99884
No 296
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.13 Score=46.61 Aligned_cols=77 Identities=21% Similarity=0.244 Sum_probs=50.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCce---EeCCCCCCccHHHHHHhhc--CCCccEE
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE---FVNPKDHDKPIQQVLVDLT--DGGVDYS 268 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~---~i~~~~~~~~~~~~~~~~~--~gg~d~v 268 (345)
.++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+++ .+... ..|..+ ...+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 47999998 9999999998888999 89999898877665543 22221 123322 122223333221 2478999
Q ss_pred EEccCC
Q 019139 269 FECIGN 274 (345)
Q Consensus 269 ~d~~g~ 274 (345)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998873
No 297
>PRK06194 hypothetical protein; Provisional
Probab=95.06 E-value=0.12 Score=47.08 Aligned_cols=78 Identities=24% Similarity=0.369 Sum_probs=49.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hh---cCCceE-e--CCCCCCccHHHHHHhh--cCCC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTEF-V--NPKDHDKPIQQVLVDL--TDGG 264 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~---~g~~~~-i--~~~~~~~~~~~~~~~~--~~gg 264 (345)
+.++||+|+ |++|...+..+...|+ +|+.++++.++.+.+ .+ .+.... + |..+ ..++.+.+... ..++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFGA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999998 9999999998888999 888888876654433 22 233221 1 2222 12222222222 1247
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|++|.+.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 298
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.17 Score=44.42 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=48.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ +.++.+.+... .+.+|+++.+.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHH-hhcCcEEEECCC
Confidence 5899988 9999999999888999 888888888776544 34444322 23332 12222222222 236899888765
No 299
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.12 Score=46.00 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+.+++++.+.+ ++.+.... .|..+ ..++.+.+.... .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4679999998 9999999988888999 899998887654332 33343221 22222 122222222221 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 300
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.2 Score=45.52 Aligned_cols=99 Identities=21% Similarity=0.334 Sum_probs=58.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc-CCCccE
Q 019139 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT-DGGVDY 267 (345)
Q Consensus 196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~-~gg~d~ 267 (345)
.+++|+|+|++|...+..+. .|+ +|+.+++++++.+.+ +..+.+.. .|..+ .+++.+.+.+.. .+++|+
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVTG 79 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCCE
Confidence 57888999999999888874 788 898888887655433 22243221 23333 122333333221 247999
Q ss_pred EEEccCCHH------------------HHHHHHHHhccCCeEEEEeccC
Q 019139 268 SFECIGNVS------------------VMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 268 v~d~~g~~~------------------~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
++.+.|... ..+.+...+..+ |+++.+++.
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~ 127 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQ 127 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEec
Confidence 999988421 123334455565 777776653
No 301
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.00 E-value=0.017 Score=47.46 Aligned_cols=93 Identities=20% Similarity=0.246 Sum_probs=57.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC----CccHHHHHHhhcCCCccEEEEccC
Q 019139 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~----~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
|+|+|+|.+|.+.+..++..|. +|..+.+.+ +.+.+++.|........+. +...... ....+.+|++|-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6889999999998888877999 899998888 7777776665322222000 0000000 112248999999987
Q ss_pred CHHHHHHHHHH----hccCCeEEEEec
Q 019139 274 NVSVMRAALEC----CHKGWGTSVIVG 296 (345)
Q Consensus 274 ~~~~~~~~~~~----l~~~~G~~v~~G 296 (345)
+.. ...+++. +.++ ..++.+-
T Consensus 77 a~~-~~~~l~~l~~~~~~~-t~iv~~q 101 (151)
T PF02558_consen 77 AYQ-LEQALQSLKPYLDPN-TTIVSLQ 101 (151)
T ss_dssp GGG-HHHHHHHHCTGEETT-EEEEEES
T ss_pred ccc-hHHHHHHHhhccCCC-cEEEEEe
Confidence 654 4444444 4554 5666663
No 302
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.29 Score=44.85 Aligned_cols=79 Identities=19% Similarity=0.201 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-H----HHHHhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-F----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~----~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.++||+|+ |++|...+..+...|+ +|+.+.++.++ . +.++..+.+.. .|..+ ...+.+.+.+.. .
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVREL 122 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 4678999998 9999999988888999 78777665422 1 12223343322 22222 122222222211 1
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|+++.+.|.
T Consensus 123 ~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 GRLDILVNNAAF 134 (290)
T ss_pred CCCCEEEECCcc
Confidence 378999988773
No 303
>PRK08219 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.21 Score=43.39 Aligned_cols=74 Identities=9% Similarity=0.073 Sum_probs=45.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCccHHHHHHhhcCC--CccEEEEc
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFEC 271 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~g--g~d~v~d~ 271 (345)
.+++|+|+ |.+|...+..+... + +|++++++.++.+.+.+ ...-.++..+- .+ .+.+.+.... ++|+++.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~--~~-~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL--TD-PEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC--CC-HHHHHHHHHhcCCCCEEEEC
Confidence 57999988 99999888777666 6 89999988776554432 21112221111 11 1233333322 79999998
Q ss_pred cCC
Q 019139 272 IGN 274 (345)
Q Consensus 272 ~g~ 274 (345)
.|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 874
No 304
>PRK07677 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.12 Score=46.19 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=49.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-Ee--CCCCCCccHHHHHHhhc--CCC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~-~i--~~~~~~~~~~~~~~~~~--~gg 264 (345)
+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+... .+ |..+ ++.+.+.+.+.. .++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 468999998 9999999999999999 8999888876654332 223221 22 3222 122333333221 147
Q ss_pred ccEEEEccC
Q 019139 265 VDYSFECIG 273 (345)
Q Consensus 265 ~d~v~d~~g 273 (345)
+|+++.+.|
T Consensus 79 id~lI~~ag 87 (252)
T PRK07677 79 IDALINNAA 87 (252)
T ss_pred ccEEEECCC
Confidence 899999887
No 305
>PLN02253 xanthoxin dehydrogenase
Probab=94.94 E-value=0.12 Score=46.84 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC--c-eE--eCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~--~-~~--i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.++++++..+.+ .+++. . .. .|..+ .+.+.+.+.... .++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 3678999998 9999999988888999 888888776554333 33321 1 11 23332 122222222221 147
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|+++.+.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998873
No 306
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.94 E-value=0.18 Score=45.78 Aligned_cols=78 Identities=19% Similarity=0.252 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~----~~~~~g~~~~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+ +.+++|.... .|..+ .++..+.+.+.. .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 4678999998 4 899999999999999 8888777653222 2233453322 23332 122333333322 2
Q ss_pred CCccEEEEccC
Q 019139 263 GGVDYSFECIG 273 (345)
Q Consensus 263 gg~d~v~d~~g 273 (345)
+.+|+++++.|
T Consensus 84 g~iD~lVnnAG 94 (271)
T PRK06505 84 GKLDFVVHAIG 94 (271)
T ss_pred CCCCEEEECCc
Confidence 47999999887
No 307
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.94 E-value=0.19 Score=48.22 Aligned_cols=91 Identities=29% Similarity=0.383 Sum_probs=56.5
Q ss_pred EEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHh--cCC--ce-EeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 198 VAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKN--FGV--TE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 198 VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~--~g~--~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
|+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+ .+. .. .+|..+ .+.+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----PESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----HHHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----HHHHHHHHh-cCCEEEEC
Confidence 68889999999999998887643 79999999998776643 222 11 122222 223444443 46999999
Q ss_pred cCCHHHHHHHHHHhccCCeEEEEe
Q 019139 272 IGNVSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~~v~~ 295 (345)
+|.......+-.++..+ -.++..
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CccchhHHHHHHHHHhC-CCeecc
Confidence 99765444555566665 677773
No 308
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.93 E-value=0.43 Score=42.27 Aligned_cols=102 Identities=18% Similarity=0.167 Sum_probs=59.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHH----HHHHhcCCceE---eCCCCCCccHHHHHHhhcC--C
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKF----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 263 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~----~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~~--g 263 (345)
+.++||+|+ |.+|...+..+...|+ +++.+.+ +.++. ..+++.+.... .|..+ +.++...+.+... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 578999998 9999998888888999 6665543 32222 12233343221 23322 1222222222211 3
Q ss_pred CccEEEEccCC----------H---------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139 264 GVDYSFECIGN----------V---------------SVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 264 g~d~v~d~~g~----------~---------------~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
++|++|.+.|. . ...+.+.+.++.. |+++.+++..
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 78999999873 1 1133445556676 8999998743
No 309
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.93 E-value=0.14 Score=47.61 Aligned_cols=78 Identities=21% Similarity=0.213 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC---Cc-eE--eCCCCCCccHHHHHHhh--cCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VT-EF--VNPKDHDKPIQQVLVDL--TDG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g---~~-~~--i~~~~~~~~~~~~~~~~--~~g 263 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+ +++. .. .. .|..+ .....+.+.+. ..+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888998 899888887765443 2332 11 11 23322 12222222222 123
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|+++.+.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 310
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.92 E-value=0.15 Score=45.66 Aligned_cols=78 Identities=19% Similarity=0.281 Sum_probs=48.7
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE----eCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF----VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~----i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.+++|+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++....+ +|..+ +++..+.+.+.. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 46789999874 899999999888999 88888777544444444322111 23322 122333333222 247
Q ss_pred ccEEEEccC
Q 019139 265 VDYSFECIG 273 (345)
Q Consensus 265 ~d~v~d~~g 273 (345)
+|+++.+.|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 999999877
No 311
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.92 E-value=0.18 Score=47.41 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=31.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~ 229 (345)
+.+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999988898888763
No 312
>PRK08643 acetoin reductase; Validated
Probab=94.90 E-value=0.14 Score=45.70 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg 264 (345)
+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+. ..+.... .|..+ ++...+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 468899998 9999999999999999 8988888876544332 2232221 23322 122233333221 147
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|+++.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998863
No 313
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.90 E-value=0.26 Score=39.99 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
+|+|+|+|++|...+..+...|.++++.++..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999888888754
No 314
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.90 E-value=0.075 Score=43.95 Aligned_cols=77 Identities=21% Similarity=0.203 Sum_probs=47.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhHHHHH----HhcCCceEeC---CCCCCccHHHHHHhhc--CCC
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFDRA----KNFGVTEFVN---PKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~--~~~~~~~----~~~g~~~~i~---~~~~~~~~~~~~~~~~--~gg 264 (345)
+++|+|+ +++|...++.+...|..+|+.+.++ .++.+.+ +..+....+. ..+ .+++...+.+.. .+.
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHSS
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 6899998 9999998888887777688888888 3433322 3345322221 221 123333333332 248
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999885
No 315
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.89 E-value=0.47 Score=42.23 Aligned_cols=106 Identities=21% Similarity=0.280 Sum_probs=73.1
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC
Q 019139 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~ 262 (345)
......++|++||=+|+| +|-+|..+++..|-..|+++|-++.-++.+++ .|... +..-. .+ ++.+. +..
T Consensus 44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~--~d-Ae~LP-f~D 117 (238)
T COG2226 44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV--GD-AENLP-FPD 117 (238)
T ss_pred HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE--ec-hhhCC-CCC
Confidence 344556689999988776 59999999999986699999999988777753 23222 11111 11 11111 223
Q ss_pred CCccEEEEccCC------HHHHHHHHHHhccCCeEEEEeccCC
Q 019139 263 GGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 263 gg~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
..+|++.-+.|= +.++.++.+-|+|+ |+++++.+..
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~ 159 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK 159 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence 378888776662 35688899999998 9999998854
No 316
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.89 E-value=0.15 Score=45.54 Aligned_cols=79 Identities=25% Similarity=0.379 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce---EeCCCCCCccHHHHHHhhcC--C
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQVLVDLTD--G 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~---~i~~~~~~~~~~~~~~~~~~--g 263 (345)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. ..+... ..|..+ +..+.+.+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4678999998 9999999999888999 8999988877655443 223221 123332 1223222222211 3
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 317
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.12 Score=46.16 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~----~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...++.+...|++.|+.++++.++.. .+++.+.... +|..+ +..+.+.+.... .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4678999998 999999999999999944888888765544 2233443321 23332 122222222221 13
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 318
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.15 Score=45.61 Aligned_cols=79 Identities=18% Similarity=0.271 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-H-HHH---HHhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDR---AKNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~-~~~---~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|+ +++|...++.+...|+ +|+.++++++ . .+. ++..+.... .|..+ +.+..+.+.+.. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 9999999999999999 8888877543 2 122 223343221 23222 122333333222 2
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|+++.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 478999999873
No 319
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.11 Score=46.39 Aligned_cols=74 Identities=23% Similarity=0.321 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d~ 267 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.++++.++ +..+... . .|..+ .+++.+.+.... .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4688999998 9999999999888999 88888887654 1122211 1 23322 122323332221 247899
Q ss_pred EEEccC
Q 019139 268 SFECIG 273 (345)
Q Consensus 268 v~d~~g 273 (345)
+|.+.|
T Consensus 79 vi~~ag 84 (252)
T PRK07856 79 LVNNAG 84 (252)
T ss_pred EEECCC
Confidence 999887
No 320
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.88 E-value=0.17 Score=47.56 Aligned_cols=34 Identities=35% Similarity=0.422 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
..+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4679999999999999999999999899999875
No 321
>PRK08264 short chain dehydrogenase; Validated
Probab=94.87 E-value=0.13 Score=45.22 Aligned_cols=75 Identities=23% Similarity=0.284 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E--eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~--i~~~~~~~~~~~~~~~~~~gg~d~v~ 269 (345)
.+.+++|+|+ |.+|...++.+...|+++|+.++++.++.+. .+... . .|..+ ...+.+.+.. . +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~-~-~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEA-A-SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHh-c-CCCCEEE
Confidence 4578999988 9999999999999998678888887765432 22221 1 22222 1222222221 1 3689999
Q ss_pred EccCC
Q 019139 270 ECIGN 274 (345)
Q Consensus 270 d~~g~ 274 (345)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98875
No 322
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.87 E-value=0.16 Score=43.74 Aligned_cols=99 Identities=18% Similarity=0.216 Sum_probs=59.3
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
+.+.....++.+||-+|+| .|..+..+++ .|. .|++++.++...+.+++ .+.. +.... .+... ..+
T Consensus 22 l~~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~--~d~~~--~~~- 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA--YDINA--AAL- 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe--ccchh--ccc-
Confidence 3344445556789989885 4667777766 477 89999999887766543 2322 11110 11110 011
Q ss_pred CCCccEEEEccC-----C---HHHHHHHHHHhccCCeEEEEe
Q 019139 262 DGGVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 262 ~gg~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~ 295 (345)
.+.+|+|+.+.- . ...+..+.+.|+++ |.++++
T Consensus 92 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~ 132 (195)
T TIGR00477 92 NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV 132 (195)
T ss_pred cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence 237999886422 1 24567788889998 986555
No 323
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.15 Score=45.65 Aligned_cols=78 Identities=21% Similarity=0.297 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCce---EeCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.++++++..+.+++ .+... ..|..+ ..+..+.+.+.. .++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999999999999 79988887754333332 23221 123322 122222222221 247
Q ss_pred ccEEEEccC
Q 019139 265 VDYSFECIG 273 (345)
Q Consensus 265 ~d~v~d~~g 273 (345)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (263)
T PRK08226 83 IDILVNNAG 91 (263)
T ss_pred CCEEEECCC
Confidence 899999887
No 324
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.84 E-value=0.16 Score=45.40 Aligned_cols=35 Identities=34% Similarity=0.484 Sum_probs=30.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~ 229 (345)
+.+|+|.|+|++|..+++.+.++|.++++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 37899999999999999999999998888877543
No 325
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=94.83 E-value=0.19 Score=45.75 Aligned_cols=105 Identities=19% Similarity=0.321 Sum_probs=71.4
Q ss_pred hhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE--eCCCCCCccHHH
Q 019139 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQ 255 (345)
Q Consensus 182 a~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~--i~~~~~~~~~~~ 255 (345)
++..+.+..++++|++||=+|+|- |.+++-+|+..|. +|++++.+++..+.++ +.|...- +...+ +
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d----~-- 131 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD----Y-- 131 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc----c--
Confidence 344567889999999999999964 7778888888899 9999999999877664 4565511 11111 1
Q ss_pred HHHhhcCCCccEEE-----EccCC---HHHHHHHHHHhccCCeEEEEeccC
Q 019139 256 VLVDLTDGGVDYSF-----ECIGN---VSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 256 ~~~~~~~gg~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
+++. +.||-|+ +.+|. +.-+..+-+.|+++ |++++-...
T Consensus 132 --rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~ 178 (283)
T COG2230 132 --RDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSIT 178 (283)
T ss_pred --cccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEec
Confidence 0111 2366554 34554 23467788889998 998776653
No 326
>PRK12367 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.21 Score=44.67 Aligned_cols=72 Identities=21% Similarity=0.303 Sum_probs=45.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~~~~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~d 270 (345)
+.+++|+|+ |++|...++.+...|+ +|+++++++ +..+.... +.... .|..+ . +.+.+.. +++|+++.
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~----~-~~~~~~~-~~iDilVn 85 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK----E-ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC----H-HHHHHhc-CCCCEEEE
Confidence 578999998 9999999999999999 888887765 22222111 11112 22222 1 2222322 36999999
Q ss_pred ccCC
Q 019139 271 CIGN 274 (345)
Q Consensus 271 ~~g~ 274 (345)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9874
No 327
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.82 E-value=0.16 Score=45.53 Aligned_cols=76 Identities=22% Similarity=0.287 Sum_probs=48.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~--i~~~~~~~~~~~~~~~~~--~gg~d~ 267 (345)
+++|+|+ +++|...++.+...|+ +|+.+++++++.+.+. +.+.... .|..+ .++..+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899998 9999999998888999 8999888877654332 2231112 23222 122333333222 247999
Q ss_pred EEEccCC
Q 019139 268 SFECIGN 274 (345)
Q Consensus 268 v~d~~g~ 274 (345)
++.+.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998873
No 328
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=94.81 E-value=0.45 Score=40.84 Aligned_cols=76 Identities=25% Similarity=0.251 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-c----CCceE-eCCCCCCccHHHHHHhhcCCCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTEF-VNPKDHDKPIQQVLVDLTDGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~----g~~~~-i~~~~~~~~~~~~~~~~~~gg~d 266 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+.++.++.+.+.+ + +.... .+..+ . +.+.+.. .+.|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~-~~~~~~~-~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----D-AARAAAI-KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----H-HHHHHHH-hcCC
Confidence 5678999997 9999998888888898 88888888776554432 2 22211 11111 1 1111211 2689
Q ss_pred EEEEccCCHH
Q 019139 267 YSFECIGNVS 276 (345)
Q Consensus 267 ~v~d~~g~~~ 276 (345)
++|.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999877544
No 329
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.80 E-value=0.2 Score=41.06 Aligned_cols=96 Identities=18% Similarity=0.160 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHhcCCce-EeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~-~~~~g~~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d 270 (345)
..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... ..... +..+. -.++|+++.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 456889999999999999998888874489999988876554 44555321 01111 11111 137999999
Q ss_pred ccCCHHH----HHHHHHHhccCCeEEEEeccC
Q 019139 271 CIGNVSV----MRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 271 ~~g~~~~----~~~~~~~l~~~~G~~v~~G~~ 298 (345)
+++.... .......++++ ..++.++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~ 118 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN 118 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence 9886431 11122446776 777777653
No 330
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.79 E-value=0.39 Score=43.17 Aligned_cols=102 Identities=17% Similarity=0.163 Sum_probs=66.6
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCc
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV 265 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~ 265 (345)
+.....++++++||=+|+| .|.++..+++.....+|++++.++...+.+++.-...-+... +..+ . .....+
T Consensus 23 ll~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~-~--~~~~~f 94 (258)
T PRK01683 23 LLARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIAS-W--QPPQAL 94 (258)
T ss_pred HHhhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhc-c--CCCCCc
Confidence 3355566788999999986 367778888876444999999999988877654221111111 1111 0 122378
Q ss_pred cEEEEccC-----C-HHHHHHHHHHhccCCeEEEEec
Q 019139 266 DYSFECIG-----N-VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 266 d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G 296 (345)
|+|+.... . ...+..+.+.|+++ |++++..
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 98886533 2 24578888999998 9988753
No 331
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.79 E-value=0.21 Score=44.82 Aligned_cols=78 Identities=18% Similarity=0.334 Sum_probs=47.5
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHH---H-HHHhcCCceEe--CCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF---D-RAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~q~a~~~G~~~vi~~~~~~~~~---~-~~~~~g~~~~i--~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|++ ++|.+.++.+...|+ +|+.+.++++.. + ..++++....+ |..+ .++..+.+.... .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence 46789999873 899999998888999 788877765432 2 22333332222 3222 122222222221 1
Q ss_pred CCccEEEEccC
Q 019139 263 GGVDYSFECIG 273 (345)
Q Consensus 263 gg~d~v~d~~g 273 (345)
+.+|+++.+.|
T Consensus 87 g~ld~lv~nAg 97 (258)
T PRK07533 87 GRLDFLLHSIA 97 (258)
T ss_pred CCCCEEEEcCc
Confidence 47999999876
No 332
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.17 Score=45.29 Aligned_cols=77 Identities=21% Similarity=0.311 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----h-cCCce-E--eCCCCCCccHHHHHHhhcCCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-FGVTE-F--VNPKDHDKPIQQVLVDLTDGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~-~g~~~-~--i~~~~~~~~~~~~~~~~~~gg 264 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+. + .+... . .|..+ .+++.+.+.. -++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~--~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAE--AGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHH--hCC
Confidence 3689999998 9999999998888999 8999988877654432 1 13221 1 22222 1222222222 147
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|+++.+.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 333
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.77 E-value=0.16 Score=45.16 Aligned_cols=76 Identities=20% Similarity=0.343 Sum_probs=49.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceE---eCCCCCCccHHHHHHhhcC--CCccEEE
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEF---VNPKDHDKPIQQVLVDLTD--GGVDYSF 269 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~---i~~~~~~~~~~~~~~~~~~--gg~d~v~ 269 (345)
+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.. ++.... .|..+ ..++.+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899998 9999999999999999 89999998877655433 343221 23322 1223333332221 3799999
Q ss_pred EccCC
Q 019139 270 ECIGN 274 (345)
Q Consensus 270 d~~g~ 274 (345)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 88763
No 334
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.75 E-value=0.11 Score=47.34 Aligned_cols=79 Identities=22% Similarity=0.283 Sum_probs=50.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH----HHHHHhcC-C-ceEeCCCCCCccH---HHHHHhhcC
Q 019139 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNFG-V-TEFVNPKDHDKPI---QQVLVDLTD 262 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~----~~~~~~~g-~-~~~i~~~~~~~~~---~~~~~~~~~ 262 (345)
-.|+.|||+|+ +++|++.++=...+|+ +++.++.+++. .+..++.| + ...+|..+. ++. .+.+++..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~-eei~~~a~~Vk~e~- 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDR-EEIYRLAKKVKKEV- 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCH-HHHHHHHHHHHHhc-
Confidence 36899999988 8999997777777788 77777766643 33334434 1 234454431 233 33333333
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
|.+|++++.+|-
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 379999999883
No 335
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.75 E-value=0.2 Score=44.30 Aligned_cols=79 Identities=23% Similarity=0.240 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHhcCCce-Ee--CCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~----~~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |.+|...+..+...|+ +|++++++.++... ++..+... ++ |..+ ...+.+.+.+.. .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4578999998 9999999988888899 89999888654332 22333322 11 2222 122222222221 13
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998764
No 336
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.74 E-value=0.27 Score=45.21 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~ 229 (345)
.+.+++|+|+|++|.+++..+...|+++|+++.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999999888899996699988875
No 337
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.17 Score=45.08 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=49.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhcC--CC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLTD--GG 264 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~~--gg 264 (345)
+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+. +.+.... .|..+ ..+..+.+.+... +.
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHGR 85 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 568999998 9999999999999999 8999988876544332 2333211 23322 1222222322221 36
Q ss_pred ccEEEEccC
Q 019139 265 VDYSFECIG 273 (345)
Q Consensus 265 ~d~v~d~~g 273 (345)
+|+++.+.|
T Consensus 86 id~li~~ag 94 (252)
T PRK07035 86 LDILVNNAA 94 (252)
T ss_pred CCEEEECCC
Confidence 899998887
No 338
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.73 E-value=0.14 Score=46.64 Aligned_cols=128 Identities=18% Similarity=0.163 Sum_probs=85.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC---------CccHHHHHHhhcC
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---------DKPIQQVLVDLTD 262 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~---------~~~~~~~~~~~~~ 262 (345)
--++.++++.|.|-.|+.++..++.+|+ .|...+...++.+..+++|+.-.-..++. .+++...-.++..
T Consensus 161 tv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a 239 (356)
T COG3288 161 TVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA 239 (356)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence 3456788999999999999999999999 88888888888787787887432111111 1223222222221
Q ss_pred ---CCccEEEEccC--C---HH-HHHHHHHHhccCCeEEEEeccCCCCCceecChhh--hcc-ccEEEEeee
Q 019139 263 ---GGVDYSFECIG--N---VS-VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ--LVT-GRVWKGTAF 322 (345)
Q Consensus 263 ---gg~d~v~d~~g--~---~~-~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~--~~~-~~~i~g~~~ 322 (345)
.++|+||-+.= + |. ....+...++|| ..+|.+.... +.+.+..-.. ... +++|+|..+
T Consensus 240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~-GGNce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAET-GGNCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhc-CCCcccccCCeEEEeCCeEEEeecC
Confidence 27999998743 1 22 246777899997 9999997643 3444443332 234 899999864
No 339
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.18 Score=44.66 Aligned_cols=77 Identities=17% Similarity=0.283 Sum_probs=48.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----c--CCce-E--eCCCCCCccHHHHHHhhc--C
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVTE-F--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~--g~~~-~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+.. . +... + .|..+ .+.+.+.+.+.. .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 467999998 9999998888888898 88888888776554321 1 2211 1 23332 123333333222 2
Q ss_pred CCccEEEEccC
Q 019139 263 GGVDYSFECIG 273 (345)
Q Consensus 263 gg~d~v~d~~g 273 (345)
+++|+++.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 47999999886
No 340
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.18 Score=46.56 Aligned_cols=78 Identities=19% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hh----c-CCce-E--eCCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN----F-GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~----~-g~~~-~--i~~~~~~~~~~~~~~~~~-- 261 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+.+ ++ . +... . +|..+ .++..+.+.++.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5678999998 9999999998888899 888888877654322 11 1 1111 1 23322 122222333322
Q ss_pred CCCccEEEEccC
Q 019139 262 DGGVDYSFECIG 273 (345)
Q Consensus 262 ~gg~d~v~d~~g 273 (345)
.+++|+++.++|
T Consensus 93 ~~~iD~li~nAg 104 (306)
T PRK06197 93 YPRIDLLINNAG 104 (306)
T ss_pred CCCCCEEEECCc
Confidence 237999999887
No 341
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.72 E-value=0.18 Score=45.11 Aligned_cols=79 Identities=22% Similarity=0.326 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~~~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++. ..+.+++.+.... .|..+ .++..+.+.+.. .+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 3678999998 9999999999999999 8887765432 2233334443221 22222 122333333221 2379
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|+++.+.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 342
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.71 E-value=0.31 Score=44.54 Aligned_cols=82 Identities=20% Similarity=0.255 Sum_probs=59.7
Q ss_pred HhhcCC-CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139 187 WNTAKV-EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGG 264 (345)
Q Consensus 187 ~~~~~~-~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg 264 (345)
.+...+ -.|.+|+|+|.|. +|.-++.++...|+ +|+.+.+... ++.+.++ .
T Consensus 149 l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~---------------------~l~~~~~-----~ 201 (286)
T PRK14175 149 LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK---------------------DMASYLK-----D 201 (286)
T ss_pred HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch---------------------hHHHHHh-----h
Confidence 344443 4789999999965 99999999999999 7877754321 2222222 4
Q ss_pred ccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 265 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 265 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
+|++|.++|.+..+.. +.++++ ..++.+|..
T Consensus 202 ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 202 ADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred CCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 8999999998765554 468897 889999975
No 343
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.70 E-value=0.22 Score=43.90 Aligned_cols=78 Identities=13% Similarity=0.151 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+ ++.+.+.. .|..+ +++..+.+.+.. -+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4678999998 8999998888888999 888888888765443 23343321 23222 122322222221 14
Q ss_pred -CccEEEEccC
Q 019139 264 -GVDYSFECIG 273 (345)
Q Consensus 264 -g~d~v~d~~g 273 (345)
.+|+++.+.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 7999999986
No 344
>PRK07574 formate dehydrogenase; Provisional
Probab=94.70 E-value=0.31 Score=46.64 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=31.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~ 229 (345)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++..
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~ 225 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHR 225 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCC
Confidence 46799999999999999999999999 899998765
No 345
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.69 E-value=0.17 Score=45.75 Aligned_cols=78 Identities=24% Similarity=0.373 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hh---cC--Cc-eEe--CCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FG--VT-EFV--NPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~---~g--~~-~~i--~~~~~~~~~~~~~~~~~-- 261 (345)
++.+++|+|+ |.+|...++.+...|+ +|+.+.++.++.+.. ++ .+ .. .++ |..+ +.+..+.+.+..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 3578999998 9999999999999999 899988877654432 22 11 11 111 3322 122222333222
Q ss_pred CCCccEEEEccC
Q 019139 262 DGGVDYSFECIG 273 (345)
Q Consensus 262 ~gg~d~v~d~~g 273 (345)
.+++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 137899999887
No 346
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.69 E-value=0.16 Score=45.08 Aligned_cols=79 Identities=22% Similarity=0.246 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc--CCce-E--eCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~--g~~~-~--i~~~~~~~~~~~~~~~~~--~gg 264 (345)
++.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+... ++ +... . .|..+ +....+.+.... .++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 3568999998 9999999988888899 8888888776544332 22 2221 1 12222 122222222221 147
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999998884
No 347
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.67 E-value=0.23 Score=45.40 Aligned_cols=79 Identities=24% Similarity=0.304 Sum_probs=56.3
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhHHHHHH-----hcCC---ceEeCCCCCCccHHHHHHhhcC
Q 019139 193 EPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGV---TEFVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~-a~q~a~~~G~~~vi~~~~~~~~~~~~~-----~~g~---~~~i~~~~~~~~~~~~~~~~~~ 262 (345)
+-|++.+|+|+ .++|.. |-++|+ .|. +|+.+.|+++|++..+ +.++ ..++|..+.+. .-+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 45689999999 899977 677777 999 8999999999987663 3443 22456655333 3455555555
Q ss_pred C-CccEEEEccCC
Q 019139 263 G-GVDYSFECIGN 274 (345)
Q Consensus 263 g-g~d~v~d~~g~ 274 (345)
+ .+-+.++++|-
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5 78888898884
No 348
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.64 E-value=0.22 Score=44.64 Aligned_cols=34 Identities=35% Similarity=0.487 Sum_probs=29.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
..+|+|+|+|++|..++..+.+.|..+++.+|.+
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999888888643
No 349
>PRK08328 hypothetical protein; Provisional
Probab=94.64 E-value=0.17 Score=44.93 Aligned_cols=34 Identities=41% Similarity=0.493 Sum_probs=30.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
+.+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4679999999999999999999999889888743
No 350
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.63 E-value=0.2 Score=44.80 Aligned_cols=77 Identities=29% Similarity=0.440 Sum_probs=49.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE---eCCCCCCccHHHHHHhhc--CCCccE
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVDY 267 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d~ 267 (345)
+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+. +++.... .|..+ .....+.+.+.. .+++|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 578999998 9999999999999999 8999988887665443 3332211 12222 122222222221 247899
Q ss_pred EEEccC
Q 019139 268 SFECIG 273 (345)
Q Consensus 268 v~d~~g 273 (345)
++.+.|
T Consensus 84 li~~ag 89 (257)
T PRK07067 84 LFNNAA 89 (257)
T ss_pred EEECCC
Confidence 999876
No 351
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.63 E-value=0.33 Score=43.04 Aligned_cols=74 Identities=30% Similarity=0.302 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d~ 267 (345)
.+.++||+|+ |.+|...+..+...|+ +|++++++. ....+... . .|..+ ...+.+.+.+.. .+++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4678999998 9999999999888999 888887765 12222211 1 22222 122233222221 136899
Q ss_pred EEEccCC
Q 019139 268 SFECIGN 274 (345)
Q Consensus 268 v~d~~g~ 274 (345)
++.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998874
No 352
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.62 E-value=0.26 Score=43.14 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=30.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
..+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4679999999999999999999999889988876
No 353
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.21 Score=44.55 Aligned_cols=78 Identities=27% Similarity=0.364 Sum_probs=48.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce--E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE--F--VNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~--~--i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ +.+.... . .|..+ .+.+...+.+.. .+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 458999998 9999999888888898 899988887765443 2232111 1 22222 122222222221 13689
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 354
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.65 Score=41.25 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=29.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhH
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKK 231 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~ 231 (345)
.+.+++|+|+ |++|...++.+...|+ +|+... +++++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~ 41 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEE 41 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHH
Confidence 3678999998 9999999999999999 777653 44443
No 355
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.59 E-value=0.25 Score=47.39 Aligned_cols=96 Identities=17% Similarity=0.149 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
-.+.++||+|+|-+|.+++..+...|...|+++.++.++.. +++++|+. ++..++ ..+.+. .+|+||.+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e----l~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE----LLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH----HHHhhh-----hCCEEEEe
Confidence 36789999999999999999999999889999999888754 66788854 222221 222222 59999999
Q ss_pred cCCHHH---HHHHHHHhccCCe-EEEEeccC
Q 019139 272 IGNVSV---MRAALECCHKGWG-TSVIVGVA 298 (345)
Q Consensus 272 ~g~~~~---~~~~~~~l~~~~G-~~v~~G~~ 298 (345)
++++.- -...-+.++.... -++.++++
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 887532 2233344443212 46777764
No 356
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.57 E-value=0.19 Score=46.49 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=29.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
.+.+++|+|+ +++|...++.+...|+ +|+.+.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4679999998 8999999999999999 88888776
No 357
>PRK05717 oxidoreductase; Validated
Probab=94.57 E-value=0.21 Score=44.64 Aligned_cols=79 Identities=20% Similarity=0.308 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhcC--CCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~~--gg~d 266 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++.... .|..+ ..+..+.+.+... +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999998 9999999998888999 888887776554433 34443221 22322 1222222333222 3689
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998873
No 358
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.56 E-value=0.29 Score=44.50 Aligned_cols=92 Identities=18% Similarity=0.108 Sum_probs=58.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC---CceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g---~~~~i~~~~~~~~~~~~~~~~~~gg~d~v 268 (345)
..+.+++|+|+|++|.+.+..+...|+ +|++++++.++.+.+ +.+. ....+.. .+ .....+|++
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-------~~----~~~~~~Div 182 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSM-------DE----LPLHRVDLI 182 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEech-------hh----hcccCccEE
Confidence 457889999999999999988888898 899988887765433 3332 1111111 11 111368999
Q ss_pred EEccCCHH--HH---HHHHHHhccCCeEEEEecc
Q 019139 269 FECIGNVS--VM---RAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 269 ~d~~g~~~--~~---~~~~~~l~~~~G~~v~~G~ 297 (345)
+++++... .. ......++++ ..++.+-.
T Consensus 183 Inatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 183 INATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 99988531 01 1123457775 67777754
No 359
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.56 E-value=0.2 Score=45.11 Aligned_cols=78 Identities=19% Similarity=0.263 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|+ + ++|.+.++.+...|+ +|+.+.+++...+.+ ++.|.... .|..+ +++..+.+.+.. .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 4678999998 4 799999888888999 788777664222222 23343322 34433 123333333322 2
Q ss_pred CCccEEEEccC
Q 019139 263 GGVDYSFECIG 273 (345)
Q Consensus 263 gg~d~v~d~~g 273 (345)
+.+|+++.+.|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 47999998876
No 360
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.55 E-value=0.2 Score=45.31 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=49.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC--c-eE--eCCCCCCccHHHHHHhhc--C
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--T-EF--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~--~-~~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
+.+++|+|+ |.+|...+..+...|+ +|++++++.++.+.+. ..+. . .. .|..+ ++++.+ +.+.. .
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence 467899998 9999999998888999 8888888776554332 2221 1 11 23332 122322 33322 2
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999998773
No 361
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.55 E-value=0.15 Score=44.75 Aligned_cols=73 Identities=23% Similarity=0.247 Sum_probs=47.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCC-CccEEEEc
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFEC 271 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~ 271 (345)
+.+++|+|+ |++|...++.+...|+ +|+.+.++.++ ..... ...|..+ ...+.+.+.+.... ++|+++.+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEEC
Confidence 568999998 9999999999999998 88888887654 11111 1123332 12333334333333 68999998
Q ss_pred cCC
Q 019139 272 IGN 274 (345)
Q Consensus 272 ~g~ 274 (345)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 874
No 362
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.54 E-value=0.22 Score=44.32 Aligned_cols=79 Identities=20% Similarity=0.341 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+.... .|..+ .+.+.+.+.... .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999998 9999999999988999 888888887664433 22232221 23322 122322232221 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 363
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.52 E-value=0.22 Score=45.51 Aligned_cols=36 Identities=42% Similarity=0.459 Sum_probs=29.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 229 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~ 229 (345)
-.+.+++|+|+ +++|...++.+...|+ +|+.++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 35789999998 9999999998888999 787776543
No 364
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.51 E-value=0.78 Score=35.51 Aligned_cols=93 Identities=19% Similarity=0.183 Sum_probs=61.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHH
Q 019139 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (345)
Q Consensus 198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~ 277 (345)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+- .-.+.+.+..-..++.++-+++....
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~---~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA---TDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T---TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc---hhhhHHhhcCccccCEEEEccCCHHH
Confidence 5788999999999999999765 899999999999999988854 333222 11234444433378988888876542
Q ss_pred HH---HHHHHhccCCeEEEEec
Q 019139 278 MR---AALECCHKGWGTSVIVG 296 (345)
Q Consensus 278 ~~---~~~~~l~~~~G~~v~~G 296 (345)
-. ..++.+.+. .+++..-
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~~ 96 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEEE
Confidence 22 233444454 5665443
No 365
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.51 E-value=0.18 Score=44.01 Aligned_cols=100 Identities=21% Similarity=0.188 Sum_probs=62.7
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhc
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
+....+++++++||-+|+|. |..+..+++.. . ++++++.+++..+.++ ..+.+.+-.... +..+ .+.
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~---~~~ 140 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWK---GWP 140 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---Cccc---CCC
Confidence 34566788999999998863 55666666654 3 7999999887766554 334432111111 1111 111
Q ss_pred -CCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139 262 -DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 262 -~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 295 (345)
.+.+|+|+-...-......+.+.|+++ |++++.
T Consensus 141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 247998886655445567788999998 998754
No 366
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.50 E-value=0.2 Score=45.34 Aligned_cols=78 Identities=23% Similarity=0.313 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-H---hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~---~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+ + ..+.... .|..+ .......+.... -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999989999 898888877654333 2 2233211 22222 122222222222 24
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|+++.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 367
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.49 E-value=0.39 Score=42.73 Aligned_cols=106 Identities=20% Similarity=0.202 Sum_probs=67.1
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
....+..+..+||-+|.| .|..++.+++.++ ..+++.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 61 ~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~ 137 (234)
T PLN02781 61 SMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLL 137 (234)
T ss_pred HHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHH
Confidence 344556677899988874 4666666777653 3489999999988777753 45433222221 23344444432
Q ss_pred ----CCCccEEEEccC---CHHHHHHHHHHhccCCeEEEEec
Q 019139 262 ----DGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 262 ----~gg~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~G 296 (345)
.+.||+||--.. -...+..+++.+++| |.+++-.
T Consensus 138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn 178 (234)
T PLN02781 138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN 178 (234)
T ss_pred hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence 247998885432 134477888999997 9887644
No 368
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.46 E-value=0.23 Score=44.28 Aligned_cols=79 Identities=19% Similarity=0.343 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
++.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++.+.... .|..+ +.++.+.+.... .+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999998 9999999988888999 899998887654432 23343221 23322 122333333221 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 369
>PLN02244 tocopherol O-methyltransferase
Probab=94.45 E-value=0.22 Score=46.88 Aligned_cols=98 Identities=21% Similarity=0.279 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v 268 (345)
+++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++ .+...-+.... .+..+ ..+..+.+|+|
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~--~D~~~--~~~~~~~FD~V 190 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV--ADALN--QPFEDGQFDLV 190 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--cCccc--CCCCCCCccEE
Confidence 678899989986 36677788887788 99999999987666543 23321111110 01100 01223479999
Q ss_pred EEccC-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139 269 FECIG-----N-VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 269 ~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+..-. . ...+..+.+.|+++ |++++...
T Consensus 191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 86433 1 23577888999998 99988653
No 370
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.43 E-value=0.29 Score=43.79 Aligned_cols=79 Identities=19% Similarity=0.169 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH---HHHhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~---~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.+.++||+|+ |++|...++.+...|+ +|+.+.++++..+ ...+.+.... +|..+ .+...+.+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999998 9999999999999999 7888777632212 2223343211 23322 122222222221 247
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 371
>PLN03139 formate dehydrogenase; Provisional
Probab=94.42 E-value=0.41 Score=45.83 Aligned_cols=45 Identities=20% Similarity=0.228 Sum_probs=35.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g 239 (345)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++.....+..++.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57799999999999999999999999 8999887643333333344
No 372
>PLN03075 nicotianamine synthase; Provisional
Probab=94.41 E-value=0.3 Score=44.88 Aligned_cols=98 Identities=19% Similarity=0.143 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcC-----CceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFG-----VTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~g-----~~~~i~~~~~~~~~~~~~~~~~~gg~d~ 267 (345)
+.++|+-+|+|+.++.++.+++.+. ..+++.+|.+++..+.+++.- ...-+.... .+..+.. ...++||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~~~--~~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMDVT--ESLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhhcc--cccCCcCE
Confidence 7789999999999998888887654 237999999999888887543 122122211 1121110 01248999
Q ss_pred EEEcc------CC-HHHHHHHHHHhccCCeEEEEec
Q 019139 268 SFECI------GN-VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 268 v~d~~------g~-~~~~~~~~~~l~~~~G~~v~~G 296 (345)
||-.+ .. ...+..+.+.|++| |.++.-.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 99764 22 34578888999997 8877543
No 373
>PRK06720 hypothetical protein; Provisional
Probab=94.40 E-value=0.27 Score=41.33 Aligned_cols=79 Identities=25% Similarity=0.266 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-H---hcCCce-E--eCCCCCCccHHHHHHhh--cCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE-F--VNPKDHDKPIQQVLVDL--TDG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~---~~g~~~-~--i~~~~~~~~~~~~~~~~--~~g 263 (345)
.+.+++|+|+ +++|...+..+...|+ +|+.++++++..+.. + +.+... . .|..+ ..++.+.+.+. ..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK-QGDWQRVISITLNAFS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4678999998 8999999888888999 899888876654322 2 234332 1 22221 12222222211 124
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 78999998874
No 374
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.40 E-value=0.14 Score=45.92 Aligned_cols=107 Identities=18% Similarity=0.261 Sum_probs=65.2
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHH-HHHHh
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQ-QVLVD 259 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~-~~~~~ 259 (345)
+....+++||++|+=-|.| .|.++..++++.| -.+|+..+.++++.+.++ ..|....+.... .|.. +-..+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG--ST
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceecccccc
Confidence 5567889999999988764 3777777887765 338999999999888774 456543222111 1111 01111
Q ss_pred hcCCCccEEE-EccCCHHHHHHHHHHh-ccCCeEEEEec
Q 019139 260 LTDGGVDYSF-ECIGNVSVMRAALECC-HKGWGTSVIVG 296 (345)
Q Consensus 260 ~~~gg~d~v~-d~~g~~~~~~~~~~~l-~~~~G~~v~~G 296 (345)
-....+|.|| |.-..-..+..+.+.| +++ |+++.+-
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fs 146 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFS 146 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEE
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEEC
Confidence 1123688666 6555445789999999 897 9988874
No 375
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.37 E-value=0.14 Score=41.30 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=29.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
..+|+|.|+|++|...+..+...|..+++.+|..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999999999999999888888743
No 376
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.36 E-value=0.23 Score=43.77 Aligned_cols=78 Identities=19% Similarity=0.263 Sum_probs=49.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg 264 (345)
+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ +..+.... .|..+ ..++.+.+.... .++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999998 9999999998888999 899998887654432 22232221 12222 122333333221 137
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998774
No 377
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.28 E-value=0.27 Score=43.36 Aligned_cols=79 Identities=23% Similarity=0.214 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce-E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
++.+++|+|+ |.+|...+..+...|+ .|+...++.++.+.+ ...+... . .|..+ .+.+.+.+.+.. .+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 3578999998 9999999998888998 788877776665544 3333322 1 22222 122222222221 14799
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999873
No 378
>PRK12743 oxidoreductase; Provisional
Probab=94.27 E-value=0.24 Score=44.26 Aligned_cols=78 Identities=19% Similarity=0.103 Sum_probs=46.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHH----HHHhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~----~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
+.+++|+|+ |++|...++.+...|+ +|+.+. ++.++.+ .++..+.... .|..+ .......+.+.. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 468999998 9999999999999999 776654 3444332 2233454322 23322 122222222221 13
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 379
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.27 E-value=0.89 Score=42.44 Aligned_cols=38 Identities=26% Similarity=0.301 Sum_probs=32.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 019139 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (345)
Q Consensus 196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~ 234 (345)
.+|.|+|+|.+|.-.++.+...|+ +|+..+.+++..+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 579999999999998888888999 99999998776543
No 380
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.24 E-value=0.95 Score=40.66 Aligned_cols=96 Identities=22% Similarity=0.204 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v 268 (345)
.++.+||=+|+| .|..+..+++. |. +|++++.+++..+.+++ .|...-+.... .+.. .+.....+.+|+|
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~--~d~~-~l~~~~~~~fD~V 116 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH--CAAQ-DIAQHLETPVDLI 116 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE--cCHH-HHhhhcCCCCCEE
Confidence 456788888886 47778888775 77 89999999988877754 23211111111 1221 2222333579998
Q ss_pred EEcc-----CC-HHHHHHHHHHhccCCeEEEEe
Q 019139 269 FECI-----GN-VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 269 ~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 295 (345)
+... .. ...+..+.+.|+|+ |+++++
T Consensus 117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 8532 22 23478888999998 999765
No 381
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.24 E-value=0.44 Score=42.09 Aligned_cols=83 Identities=22% Similarity=0.272 Sum_probs=57.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH--hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK--NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
+++|.|+|.+|...++.+...|. +|+.++.++++.+... ++... ++..+. .-.+.++++--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~---t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDA---TDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecC---CCHHHHHhcCCCcCCEEEEeeCC
Confidence 57899999999999999999999 9999999999877633 35543 332222 11344555433489999999997
Q ss_pred HHHHHHHHHHh
Q 019139 275 VSVMRAALECC 285 (345)
Q Consensus 275 ~~~~~~~~~~l 285 (345)
.. .+..+-.+
T Consensus 77 d~-~N~i~~~l 86 (225)
T COG0569 77 DE-VNSVLALL 86 (225)
T ss_pred CH-HHHHHHHH
Confidence 54 44444333
No 382
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.17 E-value=0.39 Score=42.47 Aligned_cols=34 Identities=35% Similarity=0.384 Sum_probs=29.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
+.+|+|.|+|++|...+..+..+|..+++.+|.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999888888543
No 383
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.15 E-value=0.24 Score=44.19 Aligned_cols=77 Identities=21% Similarity=0.283 Sum_probs=48.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCce--Ee--CCCCCCccHHHHHHhhc--C
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE--FV--NPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~--~i--~~~~~~~~~~~~~~~~~--~ 262 (345)
+.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. + .+... .+ |..+ +++..+.+.+.. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 468999998 9999999998888999 8888888776543332 1 22111 11 2222 122222232221 2
Q ss_pred CCccEEEEccC
Q 019139 263 GGVDYSFECIG 273 (345)
Q Consensus 263 gg~d~v~d~~g 273 (345)
+++|+++.+.|
T Consensus 80 ~~id~vv~~ag 90 (259)
T PRK12384 80 GRVDLLVYNAG 90 (259)
T ss_pred CCCCEEEECCC
Confidence 47899999887
No 384
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.09 E-value=0.46 Score=47.97 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=65.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (345)
Q Consensus 196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~ 275 (345)
++++|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...++-... -.+.+++..-..+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence 688999999999999999999998 8999999999999999888654443222 12333333223788888777764
Q ss_pred HHH---HHHHHHhccCCeEEEEe
Q 019139 276 SVM---RAALECCHKGWGTSVIV 295 (345)
Q Consensus 276 ~~~---~~~~~~l~~~~G~~v~~ 295 (345)
... -...+...+. .+++.-
T Consensus 493 ~~~~~iv~~~~~~~~~-~~iiar 514 (558)
T PRK10669 493 YEAGEIVASAREKRPD-IEIIAR 514 (558)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEE
Confidence 422 2233444554 566554
No 385
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.09 E-value=0.13 Score=44.79 Aligned_cols=104 Identities=21% Similarity=0.319 Sum_probs=67.2
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcC-
Q 019139 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD- 262 (345)
Q Consensus 190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~- 262 (345)
.+.....+||-+|.+ +|..++.+|+++ +. +|+.++.++++.+.++ +.|...-+.... .+..+.+.++..
T Consensus 41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~ 116 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELAND 116 (205)
T ss_dssp HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHT
T ss_pred HHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhc
Confidence 334456789999985 488888888876 45 8999999999888774 456543333322 234444444432
Q ss_pred ---CCccEEE-EccCC--HHHHHHHHHHhccCCeEEEEeccC
Q 019139 263 ---GGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 263 ---gg~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
+.||.|| |+--+ ..-+..++++|+++ |.++.=...
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l 157 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL 157 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence 3799877 55332 12367788999997 888766543
No 386
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.08 E-value=0.23 Score=45.62 Aligned_cols=42 Identities=29% Similarity=0.372 Sum_probs=37.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~ 235 (345)
.+.+|+|+|+|+.|.+++..+...|+++|+.++++.++.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 457899999999999999999999998899999998876654
No 387
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.08 E-value=0.3 Score=43.97 Aligned_cols=79 Identities=22% Similarity=0.318 Sum_probs=47.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|+ +++|.+.++.+...|+ +|+.+.+.+...+.++ +.+.... .|..+ .++..+.+.+.. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence 4678999984 5899999999889999 7877655443223332 2232222 23332 223333333322 2
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|+++.+.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999998763
No 388
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.07 E-value=0.29 Score=43.27 Aligned_cols=78 Identities=19% Similarity=0.249 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee--CCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 263 (345)
++.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++.+... ++ |..+ ...+.+.+.... .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999998 9999999999999999 888888877664433 2223222 11 2222 122222222221 13
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 389
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.06 E-value=0.26 Score=47.10 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999899999876
No 390
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.06 E-value=0.78 Score=41.19 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=67.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGG 264 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg 264 (345)
+.......++.+||=+|+|. |.++..+++.. +. +|++++.++.-.+.+++.+.+-+. .+.. .+ ...+.
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~~-~~--~~~~~ 89 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDVR-DW--KPKPD 89 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cChh-hC--CCCCC
Confidence 44556667889999999864 77777888775 55 899999999988888775543221 1111 11 11247
Q ss_pred ccEEEEccC-----C-HHHHHHHHHHhccCCeEEEEe
Q 019139 265 VDYSFECIG-----N-VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 265 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 295 (345)
+|+|+.... . ...+..+.+.|+|+ |++++.
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999987543 2 34567888899998 998865
No 391
>PRK01581 speE spermidine synthase; Validated
Probab=94.04 E-value=0.96 Score=42.82 Aligned_cols=103 Identities=17% Similarity=0.078 Sum_probs=64.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC-ce----EeCCCCC---CccHHHHHHhhcCC
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE----FVNPKDH---DKPIQQVLVDLTDG 263 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~----~i~~~~~---~~~~~~~~~~~~~g 263 (345)
.....+|||+|+| .|..+..+++..+.++|++++.+++-.+.++++.. .. .++..+. -.+..+.+.. ..+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~ 225 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS 225 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence 3445699999975 46667777776666699999999999998886311 00 0000000 1233344433 334
Q ss_pred CccEEEEccCC-----------HHHHHHHHHHhccCCeEEEEecc
Q 019139 264 GVDYSFECIGN-----------VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 264 g~d~v~d~~g~-----------~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.||+||--... ...+..+.+.|+++ |.++.-..
T Consensus 226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 89988854332 12467778899998 99877643
No 392
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=94.03 E-value=0.86 Score=41.88 Aligned_cols=106 Identities=16% Similarity=0.099 Sum_probs=68.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-c--CC--ceEeCCCCCCcc---HHHHHHhhcCC
Q 019139 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F--GV--TEFVNPKDHDKP---IQQVLVDLTDG 263 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~--g~--~~~i~~~~~~~~---~~~~~~~~~~g 263 (345)
..+..|+|+|+ ++.|...+.-+...|+ +|++.--.++..+.++. . +- +...|..+ +++ ..+.+++..+.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~-~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK-PESVKEAAQWVKKHLGE 104 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC-HHHHHHHHHHHHHhccc
Confidence 45567999999 9999999999999999 88886666655444432 2 11 11233322 122 23344444445
Q ss_pred -CccEEEEccCC--------------------------HHHHHHHHHHhccCCeEEEEeccCCC
Q 019139 264 -GVDYSFECIGN--------------------------VSVMRAALECCHKGWGTSVIVGVAAS 300 (345)
Q Consensus 264 -g~d~v~d~~g~--------------------------~~~~~~~~~~l~~~~G~~v~~G~~~~ 300 (345)
+.-.+++++|- -.....++.++++..||+|.+++..+
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 78888888872 12344555667755599999988654
No 393
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.02 E-value=0.53 Score=42.76 Aligned_cols=101 Identities=19% Similarity=0.116 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eEeCCCCC---CccHHHHHHhhcCCCccE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDY 267 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~--~~i~~~~~---~~~~~~~~~~~~~gg~d~ 267 (345)
+..++||++|+|. |..+..+++.....++++++.+++-.+.+++.-.. ..++.... ..+..+.+.. ..+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence 3456999998864 44555666665566899999998877777653111 00111000 0223333333 2358998
Q ss_pred EEEccC----------CHHHHHHHHHHhccCCeEEEEec
Q 019139 268 SFECIG----------NVSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 268 v~d~~g----------~~~~~~~~~~~l~~~~G~~v~~G 296 (345)
|+-... ....++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 874322 123356788899998 9998764
No 394
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.01 E-value=0.27 Score=44.43 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|+ + ++|.+.++.+...|+ +|+.+.+++...+.+++ .+.... .|..+ +++..+.+.+.. .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 4678999998 3 799998888888999 78877766321222222 221112 23332 123333333322 2
Q ss_pred CCccEEEEccC
Q 019139 263 GGVDYSFECIG 273 (345)
Q Consensus 263 gg~d~v~d~~g 273 (345)
+++|+++++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 47999999987
No 395
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.98 E-value=0.29 Score=43.43 Aligned_cols=77 Identities=25% Similarity=0.318 Sum_probs=48.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 265 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~ 265 (345)
.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.. .+.... .|..+ .+++.+.+.+.. .+++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCCC
Confidence 57999998 9999999988888999 89999888776554432 232211 23332 122322222221 2368
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|++|.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999887763
No 396
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=93.98 E-value=0.43 Score=41.23 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=58.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHhcCCceEeCCCCCCc
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTEFVNPKDHDK 251 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-------------------~----~~~~~~~g~~~~i~~~~~~~ 251 (345)
+.+|+|+|+|++|.-.+..+..+|.++++.+|...- | .+.++++..+-.+.... .
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~--~ 98 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT--D 98 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--c
Confidence 478999999999999999999999988888875421 1 12234555543333221 1
Q ss_pred cHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 252 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 252 ~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.+.+...++. .++|+|+++.....+...+-+.++...-.++..+.
T Consensus 99 ~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~~ip~i~~~~ 143 (197)
T cd01492 99 DISEKPEEFF-SQFDVVVATELSRAELVKINELCRKLGVKFYATGV 143 (197)
T ss_pred CccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 1111111111 36899999988766444444444443133444443
No 397
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.97 E-value=0.31 Score=44.16 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=30.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 230 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~ 230 (345)
.+.+++|+|+ |++|...+..+...|+ +|+++.++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4578999998 9999999998888999 8888877643
No 398
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.95 E-value=0.21 Score=44.65 Aligned_cols=75 Identities=24% Similarity=0.202 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~ 269 (345)
++.+++|+|+ |++|...++.+...|+ +|+.+.+++... . .-.... ..|..+ .+...+.+.+.. .+++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999998 9999999999888999 898888875431 1 101111 123322 122222222221 24789999
Q ss_pred EccC
Q 019139 270 ECIG 273 (345)
Q Consensus 270 d~~g 273 (345)
.+.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 399
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.86 E-value=0.64 Score=42.67 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=36.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 240 (345)
+|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37788999999988888888898 89999999998888877665
No 400
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.86 E-value=0.56 Score=42.82 Aligned_cols=68 Identities=18% Similarity=0.286 Sum_probs=47.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~ 276 (345)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+++.|.... .. .+. +.+ ...|+||-|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~--~~~-~~~-----~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---AS--TDL-SLL-----KDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---cc--CCH-hHh-----cCCCEEEEcCCHHH
Confidence 58899999999988888888898 89999999998888877764211 11 111 111 25788888777543
No 401
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.82 E-value=0.49 Score=45.46 Aligned_cols=106 Identities=18% Similarity=0.267 Sum_probs=61.3
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-------HHHhc-CCceE-eCCCCCCccHHHHHHh
Q 019139 190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVD 259 (345)
Q Consensus 190 ~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-------~~~~~-g~~~~-i~~~~~~~~~~~~~~~ 259 (345)
.+...+.+|+|+|+ |.+|...+..+...|+ +|++++++..+.+ ..... +.+.+ .|..+ .+.+.+.+..
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHH
Confidence 34456779999998 9999999999988999 8999888765321 11112 22222 23322 1222222222
Q ss_pred hcCCCccEEEEccCCHH------------HHHHHHHHhccC-CeEEEEeccC
Q 019139 260 LTDGGVDYSFECIGNVS------------VMRAALECCHKG-WGTSVIVGVA 298 (345)
Q Consensus 260 ~~~gg~d~v~d~~g~~~------------~~~~~~~~l~~~-~G~~v~~G~~ 298 (345)
. +.++|+||.|++... ....+++.++.. .+++|.++..
T Consensus 133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 1 116999999886421 122344444432 2478887753
No 402
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.82 E-value=0.38 Score=42.30 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=59.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEeC-------CCCCCcc-HHHHHHhh-
Q 019139 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVN-------PKDHDKP-IQQVLVDL- 260 (345)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i~-------~~~~~~~-~~~~~~~~- 260 (345)
...++.+||+.|+| .|.-++.+|. .|+ +|++++.++...+.+ ++.+...... +....-+ +...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 44567899999986 4777777765 799 899999999987765 3333221100 0000000 00001111
Q ss_pred --cCCCccEEEEccC----C----HHHHHHHHHHhccCCeEEEEe
Q 019139 261 --TDGGVDYSFECIG----N----VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 261 --~~gg~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~ 295 (345)
..+.+|.++|..- . ...+..+.++|+|+ |+++++
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1136899998653 1 23477888899997 875543
No 403
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=93.79 E-value=0.34 Score=43.17 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~---~i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ |++|...+..+...|+ +++.+++++++.+.+ +..+.+. ..|..+ .++..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4689999998 9999999998889999 788887777654433 2233322 123332 122223332221 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 404
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.75 E-value=0.54 Score=41.53 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=32.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~ 234 (345)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence 47899998 9999999999989999 89999888876543
No 405
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=93.75 E-value=0.18 Score=47.47 Aligned_cols=75 Identities=21% Similarity=0.187 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcC--Cce---EeCCCCCCccHHHHHHhhcCC-Cc
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFG--VTE---FVNPKDHDKPIQQVLVDLTDG-GV 265 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g--~~~---~i~~~~~~~~~~~~~~~~~~g-g~ 265 (345)
.+.+|||+|+ |.+|...++.+...|+ +|++++++..... ..+.++ ... ..|..+ .+.+.++..+ ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-----AAKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-----HHHHHHHHhhcCC
Confidence 3678999998 9999999999999999 8888877655322 111221 111 112222 2233333334 68
Q ss_pred cEEEEccCC
Q 019139 266 DYSFECIGN 274 (345)
Q Consensus 266 d~v~d~~g~ 274 (345)
|++|.+.+.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999998873
No 406
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.74 E-value=0.54 Score=48.06 Aligned_cols=95 Identities=15% Similarity=0.212 Sum_probs=65.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++-... -.+.+++..-..+|.++-++.+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat----~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDAT----RMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCC----CHHHHHhcCCCcCCEEEEEeCC
Confidence 3689999999999999999999999 8999999999999999888653332211 1233333322378999999887
Q ss_pred HHHHHHH---HHHhccCCeEEEEe
Q 019139 275 VSVMRAA---LECCHKGWGTSVIV 295 (345)
Q Consensus 275 ~~~~~~~---~~~l~~~~G~~v~~ 295 (345)
+...... .+.+.|+ -+++.-
T Consensus 475 ~~~n~~i~~~ar~~~p~-~~iiaR 497 (621)
T PRK03562 475 PQTSLQLVELVKEHFPH-LQIIAR 497 (621)
T ss_pred HHHHHHHHHHHHHhCCC-CeEEEE
Confidence 6533333 3334454 455443
No 407
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.73 E-value=0.48 Score=41.73 Aligned_cols=70 Identities=24% Similarity=0.335 Sum_probs=49.0
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 198 VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
|+|+|+ |.+|...++.+...+. +|.+..++.. ..+.++..|++.+ ..+- .+ .+.+.+... ++|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~--~~-~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY--DD-PESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T--T--HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc--CC-HHHHHHHHc-CCceEEeecC
Confidence 689998 9999999999999888 8888888764 3556677888644 2221 11 233333322 7999999888
No 408
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.72 E-value=0.23 Score=43.88 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=46.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhH-HHH---HHhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKK-FDR---AKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~-~~~---~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
+.+++|+|+ |++|...++.+...|+ +++.. .+++.+ .+. ++..+.... .|..+ ..+..+.+.+.. .+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 578899998 9999999999999999 66664 333322 222 233454432 23322 122222222221 14
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 81 ~id~li~~ag~ 91 (246)
T PRK12938 81 EIDVLVNNAGI 91 (246)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 409
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.71 E-value=0.37 Score=45.67 Aligned_cols=35 Identities=31% Similarity=0.341 Sum_probs=31.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~ 229 (345)
+.+|+|+|+|++|..+++.+..+|.++++.++.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 47899999999999999999999998998887654
No 410
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.70 E-value=0.37 Score=43.30 Aligned_cols=79 Identities=23% Similarity=0.410 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.+++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+ +..+.... .|..+ .....+.+.+.. -+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 4578999998 9999998888888999 788888877664433 23343322 23322 122222222221 14
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 411
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.66 E-value=0.43 Score=40.36 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~ 229 (345)
+|+|+|+|++|...++.+...|..+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998888888765
No 412
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=93.65 E-value=0.42 Score=43.27 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=66.9
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCC
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGG 264 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg 264 (345)
+....+++++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.... ..+.... .++.+ ..+..+.
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~~--~~~~~~~ 117 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDILK--KDFPENT 117 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCccc--CCCCCCC
Confidence 44667889999999998863 5566677777788 899999999887777653221 1111100 11100 0122247
Q ss_pred ccEEEEc--c---C---CHHHHHHHHHHhccCCeEEEEecc
Q 019139 265 VDYSFEC--I---G---NVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 265 ~d~v~d~--~---g---~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+|+|+.. . . -...++.+.+.|+|+ |++++...
T Consensus 118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 9998862 1 1 123567788999998 99998764
No 413
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.63 E-value=1.3 Score=37.58 Aligned_cols=101 Identities=20% Similarity=0.204 Sum_probs=63.3
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC
Q 019139 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~ 262 (345)
.....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ .+...+-.... +... ...
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~----~~~ 95 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI----ELP 95 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh----hcC
Confidence 3455667888998888863 6777777776543389999999987776643 33322111111 1111 112
Q ss_pred CCccEEEEccCC---HHHHHHHHHHhccCCeEEEEec
Q 019139 263 GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 263 gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G 296 (345)
+.+|+++..... ...+..+.+.|+++ |++++..
T Consensus 96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 479998854321 23467788899997 9987754
No 414
>PLN00203 glutamyl-tRNA reductase
Probab=93.61 E-value=0.37 Score=47.95 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=60.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g 273 (345)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++...+ ..... .+..+.+ ...|+||.+++
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~-~dl~~al-----~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPL-DEMLACA-----AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecH-hhHHHHH-----hcCCEEEEccC
Confidence 689999999999999999999999878999999988765554 4532111 11110 1111111 26899999987
Q ss_pred CHHH--HHHHHHHhcc----CCe--EEEEeccC
Q 019139 274 NVSV--MRAALECCHK----GWG--TSVIVGVA 298 (345)
Q Consensus 274 ~~~~--~~~~~~~l~~----~~G--~~v~~G~~ 298 (345)
++.. ....+..+.+ .+. .++.++.+
T Consensus 339 s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 339 SETPLFLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred CCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 6431 2334444322 101 47777764
No 415
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.58 E-value=0.33 Score=43.04 Aligned_cols=40 Identities=25% Similarity=0.253 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 019139 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (345)
Q Consensus 192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~ 232 (345)
..++.+++|+|+ |++|...++.+...|+ +|++++++.++.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~ 49 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKL 49 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHH
Confidence 457889999998 9999999988888899 888988887654
No 416
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.58 E-value=0.43 Score=42.99 Aligned_cols=76 Identities=20% Similarity=0.236 Sum_probs=47.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ +..+.+..+ |..+ ..++.+.+.... .+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6899998 9999999988888999 888888887664432 223333221 2222 122222222221 14799
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
++|.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998874
No 417
>PRK07340 ornithine cyclodeaminase; Validated
Probab=93.57 E-value=0.38 Score=44.62 Aligned_cols=104 Identities=15% Similarity=0.070 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHH-HhcCCc--eEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~-~~~g~~--~~i~~~~~~~~~~~~~~~~~~gg~d~v 268 (345)
....+++|+|+|..|.+.+..+.. .+.++|.+.+++.++.+.+ .++... .+. . .+..+.+ ..+|+|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av-----~~aDiV 192 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP-----EAVDLV 192 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh-----hcCCEE
Confidence 456789999999999998888764 6877899999998875543 344211 111 1 1233333 269999
Q ss_pred EEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhh
Q 019139 269 FECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ 310 (345)
Q Consensus 269 ~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~ 310 (345)
+.++.+...+-.. .++++ -.+..+|.+. ...-++++..
T Consensus 193 itaT~s~~Pl~~~--~~~~g-~hi~~iGs~~-p~~~El~~~~ 230 (304)
T PRK07340 193 VTATTSRTPVYPE--AARAG-RLVVAVGAFT-PDMAELAPRT 230 (304)
T ss_pred EEccCCCCceeCc--cCCCC-CEEEecCCCC-CCcccCCHHH
Confidence 9988865433222 37897 8999999854 3456677543
No 418
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.56 E-value=1.4 Score=36.74 Aligned_cols=86 Identities=22% Similarity=0.253 Sum_probs=54.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~ 272 (345)
.+.+|.|+|.|.-|++.++-+|-.|. +|++..+... ..+.+++-|.+. .+..+.+. ..|+|+-.+
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~v--------~~~~eAv~-----~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFEV--------MSVAEAVK-----KADVVMLLL 68 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-EC--------CEHHHHHH-----C-SEEEE-S
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCee--------ccHHHHHh-----hCCEEEEeC
Confidence 46899999999999999999999999 7776666655 888899988752 24455544 478888777
Q ss_pred CCHH---HH-HHHHHHhccCCeEEEE
Q 019139 273 GNVS---VM-RAALECCHKGWGTSVI 294 (345)
Q Consensus 273 g~~~---~~-~~~~~~l~~~~G~~v~ 294 (345)
.+.. .. +.....|+++ -.+++
T Consensus 69 PD~~q~~vy~~~I~p~l~~G-~~L~f 93 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKPG-ATLVF 93 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-TT--EEEE
T ss_pred ChHHHHHHHHHHHHhhCCCC-CEEEe
Confidence 7532 22 4444578885 44443
No 419
>PLN02928 oxidoreductase family protein
Probab=93.56 E-value=0.56 Score=44.32 Aligned_cols=34 Identities=21% Similarity=0.495 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
.|.++.|+|.|.+|...++.++.+|+ +|++.+++
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~ 191 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRS 191 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCC
Confidence 47899999999999999999999999 99999876
No 420
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=93.55 E-value=0.3 Score=37.78 Aligned_cols=96 Identities=26% Similarity=0.333 Sum_probs=57.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d 270 (345)
|.+|+-.|+| .|..++.+++.. ..++++++.++...+.++. .+.+.-+.... .++.+....+..+.+|+|+-
T Consensus 1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~--~D~~~~~~~~~~~~~D~Iv~ 76 (117)
T PF13659_consen 1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV--GDARDLPEPLPDGKFDLIVT 76 (117)
T ss_dssp TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE--SHHHHHHHTCTTT-EEEEEE
T ss_pred CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE--CchhhchhhccCceeEEEEE
Confidence 4567777664 355555555555 4499999999998887764 23211111111 34443433344458999886
Q ss_pred ccCC--------------HHHHHHHHHHhccCCeEEEEe
Q 019139 271 CIGN--------------VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 271 ~~g~--------------~~~~~~~~~~l~~~~G~~v~~ 295 (345)
...- ...+..+.+.|+++ |.++++
T Consensus 77 npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 77 NPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp --STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 4221 13377888999997 998765
No 421
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.54 E-value=0.47 Score=45.84 Aligned_cols=74 Identities=24% Similarity=0.308 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCc-eE--eCCCCCCccHHHHHHhhcCCCccEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~-~~--i~~~~~~~~~~~~~~~~~~gg~d~v 268 (345)
.+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.. ...+.. .. .|..+ .+.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-----~~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-----EAALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-----HHHHHHHh-CCCCEE
Confidence 3679999998 9999999998888999 888888877654322 111111 11 22222 12233322 379999
Q ss_pred EEccCC
Q 019139 269 FECIGN 274 (345)
Q Consensus 269 ~d~~g~ 274 (345)
+.+.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988763
No 422
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=93.54 E-value=0.68 Score=40.14 Aligned_cols=34 Identities=38% Similarity=0.561 Sum_probs=30.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
..+|+|.|+|++|...++.+.+.|..+++.+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4679999999999999999999999889888877
No 423
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=93.51 E-value=0.35 Score=44.96 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=31.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~ 230 (345)
.+.+|.|+|.|.+|...++.++.+|+ +|++.++..+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 8999876543
No 424
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.50 E-value=0.33 Score=43.62 Aligned_cols=103 Identities=21% Similarity=0.280 Sum_probs=59.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC------hhHHHHHHhcCCc-eE--eCCCCCCccHHHHHHhhc
Q 019139 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID------PKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~------~~~~~~~~~~g~~-~~--i~~~~~~~~~~~~~~~~~ 261 (345)
.+.+++|+|+ +++|...+..+...|+ +|+.+.++ ++..+.+++.+.. .. .|..+ +++..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4678999996 4899999988888999 77766432 2222233222211 11 23332 122333333322
Q ss_pred --CCCccEEEEccCCH-------H----------------------HHHHHHHHhccCCeEEEEeccCC
Q 019139 262 --DGGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 262 --~gg~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
.+++|+++.+.|.. . ..+.++..++.+ |+++.+++..
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~ 150 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLG 150 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEeccc
Confidence 24799999988731 0 123455567776 9998887643
No 425
>PRK13243 glyoxylate reductase; Reviewed
Probab=93.49 E-value=0.9 Score=42.68 Aligned_cols=36 Identities=33% Similarity=0.532 Sum_probs=32.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~ 230 (345)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++..
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRK 184 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCC
Confidence 57899999999999999999999999 8999887654
No 426
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=93.47 E-value=0.8 Score=44.58 Aligned_cols=103 Identities=15% Similarity=0.163 Sum_probs=61.9
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEe-CCCCCCccHHHHHHhhcC
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV-NPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i-~~~~~~~~~~~~~~~~~~ 262 (345)
....+++|++||=.|+|+ |..++++++.++..+|++++.++++.+.++ .+|.+..+ ....+..... . ....
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~-~--~~~~ 307 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPS-Q--WAEN 307 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccccc-c--cccc
Confidence 445678899998887743 555556666555338999999999877664 45665211 1111000000 0 0112
Q ss_pred CCccEEE-E--ccCC-------------------------HHHHHHHHHHhccCCeEEEEe
Q 019139 263 GGVDYSF-E--CIGN-------------------------VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 263 gg~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 295 (345)
+.+|.|| | |+|. ...+..+++.|++| |+++..
T Consensus 308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvys 367 (426)
T TIGR00563 308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYA 367 (426)
T ss_pred cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 3799887 3 4442 13567788899998 998854
No 427
>PRK04266 fibrillarin; Provisional
Probab=93.45 E-value=1.4 Score=38.92 Aligned_cols=102 Identities=13% Similarity=0.177 Sum_probs=60.8
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCC
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 263 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~g 263 (345)
+...++++++|+=.|+|+ |..+..+++..+...|++++.+++..+.+.+. ..-..+..+. .+. .....+ .+
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~--~~~-~~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA--RKP-ERYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC--CCc-chhhhc-cc
Confidence 457789999999888753 45566667766433899999999766644322 1111221111 110 000111 13
Q ss_pred CccEEEEccCCHH----HHHHHHHHhccCCeEEEEe
Q 019139 264 GVDYSFECIGNVS----VMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 264 g~d~v~d~~g~~~----~~~~~~~~l~~~~G~~v~~ 295 (345)
.+|+++-....+. .+..+.+.|+++ |++++.
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 6999985444332 357778899998 999884
No 428
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.42 E-value=0.6 Score=43.90 Aligned_cols=99 Identities=18% Similarity=0.199 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~ 272 (345)
.++.+||=+|+|. |..+..+++..+..++++++.+++-.+.+++.....-+.... .+..+ + .+..+.+|+|+.+-
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~e~-l-p~~~~sFDvVIs~~ 186 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDAED-L-PFPTDYADRYVSAG 186 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccHHh-C-CCCCCceeEEEEcC
Confidence 4678899899865 777778888765448999999988777776532111011111 11110 0 12233799888642
Q ss_pred C-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139 273 G-----N-VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 273 g-----~-~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
. . ...++++.+.|+++ |++++++.
T Consensus 187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 1 1 24578889999998 99988764
No 429
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.41 E-value=0.53 Score=44.86 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
.+.+|+|+|+|++|..++..+.+.|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34689999999999999999999999889888765
No 430
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.40 E-value=0.31 Score=40.93 Aligned_cols=46 Identities=24% Similarity=0.268 Sum_probs=39.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 240 (345)
.|..|+++|+ -++|...++.+...|+ +||++.++++.+..+.+.-.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p 52 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETP 52 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCC
Confidence 5778999998 6899999999999999 99999999998776654433
No 431
>PRK08309 short chain dehydrogenase; Provisional
Probab=93.37 E-value=2.9 Score=35.41 Aligned_cols=143 Identities=17% Similarity=0.123 Sum_probs=70.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCC-ce--E--eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV-TE--F--VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~-~~--~--i~~~~~~~~~~~~~~~~~--~gg~d~v 268 (345)
+++|+|+++++...++.+...|+ +|+++++++++.+.++. ++. .. . .|..+ ++++.+.+.... .+++|++
T Consensus 2 ~vlVtGGtG~gg~la~~L~~~G~-~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d-~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 2 HALVIGGTGMLKRVSLWLCEKGF-HVSVIARREVKLENVKRESTTPESITPLPLDYHD-DDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred EEEEECcCHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCeEE
Confidence 57899885555556666667899 88888888776554433 321 11 1 24433 123333333332 2478999
Q ss_pred EEccCCHHHHHHHHHHhccC------CeEEEEeccCCCCCcee---cChhhhccccEEEEeeecCCc----ccc-cHHHH
Q 019139 269 FECIGNVSVMRAALECCHKG------WGTSVIVGVAASGQEIS---TRPFQLVTGRVWKGTAFGGFK----SRS-QVPWL 334 (345)
Q Consensus 269 ~d~~g~~~~~~~~~~~l~~~------~G~~v~~G~~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~----~~~-~~~~~ 334 (345)
|+.+=... ...+...++.. +--+.++|+........ +-....-+..-+.|+....-. +.+ -..-+
T Consensus 80 v~~vh~~~-~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~~~~~~~~~~~~~~~~~i~lgf~~~~~~~rwlt~~ei~~gv 158 (177)
T PRK08309 80 VAWIHSSA-KDALSVVCRELDGSSETYRLFHVLGSAASDPRIPSEKIGPARCSYRRVILGFVLEDTYSRWLTHEEISDGV 158 (177)
T ss_pred EEeccccc-hhhHHHHHHHHccCCCCceEEEEeCCcCCchhhhhhhhhhcCCceEEEEEeEEEeCCccccCchHHHHHHH
Confidence 98765422 33333343332 12456667754211111 111111113355676653332 223 33566
Q ss_pred HHHHhccc
Q 019139 335 VDKYMKKV 342 (345)
Q Consensus 335 ~~~~~~g~ 342 (345)
++.++.+.
T Consensus 159 ~~~~~~~~ 166 (177)
T PRK08309 159 IKAIESDA 166 (177)
T ss_pred HHHHhcCC
Confidence 67766543
No 432
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=93.35 E-value=1.1 Score=41.27 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=35.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 240 (345)
+|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68899999999987777778898 89999999888777776664
No 433
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.34 E-value=0.49 Score=37.84 Aligned_cols=94 Identities=16% Similarity=0.284 Sum_probs=55.0
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhH---HHHHHhcCCceEeCCCCCCc-cHH----------------
Q 019139 198 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDK-PIQ---------------- 254 (345)
Q Consensus 198 VlI~Ga-g~vG~~a~q~a~~~G--~~~vi~~~~~~~~---~~~~~~~g~~~~i~~~~~~~-~~~---------------- 254 (345)
|.|.|+ |.+|..++.+.+... + +|++......- .+.++++.+..++..++... .+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 568898 999999999999987 6 67776543332 33446788887776654100 111
Q ss_pred HHHHhhcC-CCccEEEEccCCHHHHHHHHHHhccCCeEEE
Q 019139 255 QVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSV 293 (345)
Q Consensus 255 ~~~~~~~~-gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 293 (345)
+.+.++.. ..+|+++..+.+...+.-.+..++.+ -++.
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~ia 118 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIA 118 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEE
Confidence 11122222 26777777666555577777777764 4443
No 434
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.34 E-value=0.6 Score=43.12 Aligned_cols=79 Identities=20% Similarity=0.284 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH----HHHhcCCceEe---CCCCCCccHHHHHHhhc-CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLT-DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~----~~~~~g~~~~i---~~~~~~~~~~~~~~~~~-~g 263 (345)
.+.+++|+|+ +++|...++.+...|+ +|+..++.. ++.+ .++..|..... |..+ .+...+.+.... .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 4678999998 9999999988888999 788776542 2222 22333433222 2222 112222221111 25
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.+.|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 89999998874
No 435
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.33 E-value=0.4 Score=42.42 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHH----HHhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDR----AKNFGVTEFV---NPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~-~~~~~~~~~~----~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~ 262 (345)
++.+++|+|+ |++|...+..+...|+ +|+. ..++.++.+. ++..+....+ |..+ +++....+.+.. .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3578999998 9999999999999999 6655 4555554332 2233443222 2222 122222222221 1
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|++|.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 478999998873
No 436
>PRK06849 hypothetical protein; Provisional
Probab=93.31 E-value=0.71 Score=44.27 Aligned_cols=96 Identities=20% Similarity=0.154 Sum_probs=60.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC---CCCCCccHHHHHHhhcCC-CccEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN---PKDHDKPIQQVLVDLTDG-GVDYS 268 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~---~~~~~~~~~~~~~~~~~g-g~d~v 268 (345)
...+|||+|+ .+.++..+..++..|+ +|++++..+........ .++..+. ....++.+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4578999998 6789999999999999 89999887654332211 2233221 222224466677776655 89999
Q ss_pred EEccCCHHHHHHHHHHhccCCeEE
Q 019139 269 FECIGNVSVMRAALECCHKGWGTS 292 (345)
Q Consensus 269 ~d~~g~~~~~~~~~~~l~~~~G~~ 292 (345)
+-+......+......+++. .++
T Consensus 81 IP~~e~~~~~a~~~~~l~~~-~~v 103 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY-CEV 103 (389)
T ss_pred EECChHHHhHHhhhhhhcCC-cEE
Confidence 98766432233334556554 443
No 437
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.31 E-value=0.42 Score=43.53 Aligned_cols=45 Identities=27% Similarity=0.253 Sum_probs=38.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~ 236 (345)
...+.+++|+|+|+.+.+++..++.+|+.+|+++.++.++.+.+.
T Consensus 119 ~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la 163 (272)
T PRK12550 119 VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALA 163 (272)
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 344568999999999999999999999978999999988766553
No 438
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.31 E-value=0.51 Score=42.81 Aligned_cols=78 Identities=22% Similarity=0.360 Sum_probs=47.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHH-HhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~---~~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|+ +++|.+.+..+...|+ +|+.+.+++ ++.+.+ ++++.... .|..+ .++..+.+.+.. .
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEKKW 86 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHHhc
Confidence 4678999987 5899999999989999 787776653 222222 34453222 23322 122333333322 2
Q ss_pred CCccEEEEccC
Q 019139 263 GGVDYSFECIG 273 (345)
Q Consensus 263 gg~d~v~d~~g 273 (345)
+++|+++.+.|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 47899999876
No 439
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.30 E-value=0.21 Score=44.84 Aligned_cols=75 Identities=21% Similarity=0.274 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~ 269 (345)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+. ..... ..|..+ +.++.+.+.+.. .+++|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 3578999998 9999999999999999 88888776654321 11111 123332 122333333222 24789999
Q ss_pred EccC
Q 019139 270 ECIG 273 (345)
Q Consensus 270 d~~g 273 (345)
.+.|
T Consensus 83 ~~Ag 86 (266)
T PRK06171 83 NNAG 86 (266)
T ss_pred ECCc
Confidence 9887
No 440
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.27 E-value=0.66 Score=45.83 Aligned_cols=69 Identities=28% Similarity=0.293 Sum_probs=48.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v 268 (345)
.+.+|+|+|+|.+|+.++.+++..|+ .|++++.++. ..+.+++.|......... . ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~--~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP--T---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc--c---------ccCCCCEE
Confidence 46789999999999999999999999 7998886542 234456677654433221 1 01257888
Q ss_pred EEccCC
Q 019139 269 FECIGN 274 (345)
Q Consensus 269 ~d~~g~ 274 (345)
+-+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 877775
No 441
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.23 E-value=0.51 Score=41.47 Aligned_cols=79 Identities=23% Similarity=0.327 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHhcCCceEe---CCCCCCccHHHHHHhhcC--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLTD-- 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~----~~~~~g~~~~i---~~~~~~~~~~~~~~~~~~-- 262 (345)
.+.+++|+|+ |.+|...+..+...|+ +|+++.++.. +.+ .++..+....+ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3468999998 9999999999999999 6766555443 222 12223332221 3322 1222222222221
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999988873
No 442
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.23 E-value=0.78 Score=42.04 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 193 EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 193 ~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
-.|.+|+|+|+|+ +|...++++...|+ +|+.+.+... ++.+.+ ..+|+++.+
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~~aDIvI~A 209 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----KQADIIVGA 209 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----ccCCEEEEc
Confidence 5788999999976 99999999999999 8888755211 111111 258999999
Q ss_pred cCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 272 IGNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
+|.+..+. .+.++++ ..++.+|..
T Consensus 210 tG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 210 VGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred cCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 98766333 3568887 888888864
No 443
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=93.14 E-value=1.2 Score=39.93 Aligned_cols=104 Identities=16% Similarity=0.286 Sum_probs=67.3
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhc-
Q 019139 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT- 261 (345)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~- 261 (345)
..+.....+||-+|.+ +|..++.+|+.+ +. +++.++.+++..+.++ +.|...-+.... .+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~ 149 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIE 149 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHh
Confidence 3445556788888873 578888888876 34 8999999998777664 456544443332 33445555543
Q ss_pred ----CCCccEEEEccC-C--HHHHHHHHHHhccCCeEEEEecc
Q 019139 262 ----DGGVDYSFECIG-N--VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 262 ----~gg~d~v~d~~g-~--~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.+.||.||--.. . ..-++.++++|++| |.++.=..
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~DNv 191 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYDNT 191 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEcCC
Confidence 248998874322 2 23367788999997 88765433
No 444
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.14 E-value=0.41 Score=43.90 Aligned_cols=42 Identities=26% Similarity=0.271 Sum_probs=36.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~ 235 (345)
.+.+++|+|+|+.+.+++..+..+|+++++++.++.+|.+.+
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 467899999999999999988899998899999988776555
No 445
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.13 E-value=0.5 Score=41.90 Aligned_cols=76 Identities=18% Similarity=0.240 Sum_probs=47.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 266 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d 266 (345)
+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+ +..+.... .|..+ +....+.+.... .+++|
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6899998 9999999999889999 888888876654322 23343221 23322 122223333221 13689
Q ss_pred EEEEccCC
Q 019139 267 YSFECIGN 274 (345)
Q Consensus 267 ~v~d~~g~ 274 (345)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (254)
T TIGR02415 80 VMVNNAGV 87 (254)
T ss_pred EEEECCCc
Confidence 99998873
No 446
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.12 E-value=1.7 Score=37.64 Aligned_cols=98 Identities=22% Similarity=0.260 Sum_probs=63.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHh-hcCCCccEE
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVD-LTDGGVDYS 268 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~-~~~gg~d~v 268 (345)
++.+||-+|+|. |..+..+++.....++++++.+++..+.+++ .+...+-... .+..+.+.. +..+.+|.+
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHHcCccccceE
Confidence 567888899864 7777788877644489999999988877753 2332221111 122123322 223478888
Q ss_pred EEccC--------------CHHHHHHHHHHhccCCeEEEEec
Q 019139 269 FECIG--------------NVSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 269 ~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~G 296 (345)
+-... ....++.+.+.|+++ |++++.-
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 75332 134578889999998 9998764
No 447
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.12 E-value=0.94 Score=42.35 Aligned_cols=93 Identities=20% Similarity=0.146 Sum_probs=62.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC-------CCCccHHHHHHhhcCCCccEE
Q 019139 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK-------DHDKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~-------~~~~~~~~~~~~~~~gg~d~v 268 (345)
-+|.|+|+|.+|.+.+..+...|. +|+++++++++.+.++..+........ ....+..+.+ ...|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 468999999999999998888898 899999988877766654211100000 0001222211 268999
Q ss_pred EEccCCHHHHHHHHHHhccCCeEEEEec
Q 019139 269 FECIGNVSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 269 ~d~~g~~~~~~~~~~~l~~~~G~~v~~G 296 (345)
+-++.+.. +...++.++++ -.++.+.
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~ 104 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCA 104 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEe
Confidence 99999876 78888888885 5555553
No 448
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.10 E-value=0.71 Score=47.05 Aligned_cols=96 Identities=9% Similarity=0.062 Sum_probs=67.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
.+.|+|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...++-.. .-.+.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDa----t~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDA----TQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeC----CCHHHHHhcCCccCCEEEEEeCC
Confidence 3689999999999999999999999 899999999999999988865333211 11233333333378999999888
Q ss_pred HHHHHHH---HHHhccCCeEEEEec
Q 019139 275 VSVMRAA---LECCHKGWGTSVIVG 296 (345)
Q Consensus 275 ~~~~~~~---~~~l~~~~G~~v~~G 296 (345)
+...... .+...|. .+++.-.
T Consensus 475 ~~~n~~i~~~~r~~~p~-~~IiaRa 498 (601)
T PRK03659 475 PEDTMKIVELCQQHFPH-LHILARA 498 (601)
T ss_pred HHHHHHHHHHHHHHCCC-CeEEEEe
Confidence 6533333 3444564 5666543
No 449
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.09 E-value=0.53 Score=42.17 Aligned_cols=78 Identities=12% Similarity=0.194 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH-Hh----cCCce---EeCCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KN----FGVTE---FVNPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~~-~~----~g~~~---~i~~~~~~~~~~~~~~~~~-- 261 (345)
++.+++|+|+ +++|...+..+...|+ +|+.+. +++++.+.+ ++ .+... .+|..+ .++..+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 4679999998 9999999999889999 777664 344443322 21 23221 123332 122333333222
Q ss_pred CCCccEEEEccC
Q 019139 262 DGGVDYSFECIG 273 (345)
Q Consensus 262 ~gg~d~v~d~~g 273 (345)
.+.+|+++.+.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247899998875
No 450
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=93.07 E-value=0.27 Score=45.04 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=50.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce-EeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
.+.+++|+|+|+.+.+++..+..+|+++|+++.|+.+|.+.+ ..++... +.... ..+.+.... ..+|+|++|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence 567899999999999999999999998899999998776554 3333211 11010 001111111 368999999
Q ss_pred cCC
Q 019139 272 IGN 274 (345)
Q Consensus 272 ~g~ 274 (345)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 774
No 451
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=92.99 E-value=0.99 Score=40.33 Aligned_cols=99 Identities=18% Similarity=0.302 Sum_probs=63.2
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCCcc
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVD 266 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg~d 266 (345)
+.....++.+||-+|+|. |..+..+++ .|. .+++++.+++..+.+++.... .++.. + .. .+ .+..+.+|
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~-d----~~-~~-~~~~~~fD 105 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG-D----IE-SL-PLATATFD 105 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc-C----cc-cC-cCCCCcEE
Confidence 334445678899999864 666655554 576 899999999988888765322 11111 1 10 00 12223799
Q ss_pred EEEEccC-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139 267 YSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 267 ~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+|+.... . ...+..+.+.|+++ |.+++...
T Consensus 106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 106 LAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 9986543 1 24578888899998 99987643
No 452
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=92.97 E-value=0.84 Score=38.83 Aligned_cols=94 Identities=15% Similarity=0.157 Sum_probs=57.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d 270 (345)
+++|+=+|+| .|..++.+++.....+|++++.+++..+.++ +.+.+.+ .... .+..+ + ...+.+|+|+-
T Consensus 43 ~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~--~d~~~-~--~~~~~fD~I~s 115 (181)
T TIGR00138 43 GKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVN--GRAED-F--QHEEQFDVITS 115 (181)
T ss_pred CCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEe--cchhh-c--cccCCccEEEe
Confidence 7888888885 2566666666554348999999987665553 3454322 1111 12211 1 12348998885
Q ss_pred cc-CC-HHHHHHHHHHhccCCeEEEEec
Q 019139 271 CI-GN-VSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 271 ~~-g~-~~~~~~~~~~l~~~~G~~v~~G 296 (345)
.. .. +..++.+.+.|+++ |++++.-
T Consensus 116 ~~~~~~~~~~~~~~~~Lkpg-G~lvi~~ 142 (181)
T TIGR00138 116 RALASLNVLLELTLNLLKVG-GYFLAYK 142 (181)
T ss_pred hhhhCHHHHHHHHHHhcCCC-CEEEEEc
Confidence 43 22 23456777889998 9988763
No 453
>PRK05855 short chain dehydrogenase; Validated
Probab=92.95 E-value=0.43 Score=47.92 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g 263 (345)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ++...+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4578999998 9999999988889999 798888887765543 23343221 23332 122223333322 24
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|+++.++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 79999999874
No 454
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=92.95 E-value=0.3 Score=44.57 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
..+.+++|+|+|++|.+++..+...|+.+|+++.++.++.+.+. +++....+.. + .+..+. -..+|+++++
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~~~~-----~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LELQEE-----LADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccchhc-----cccCCEEEEC
Confidence 45678999999999999999999999669999999988765543 3332110111 0 000001 1268999998
Q ss_pred cCCHHH-----HHHHHHHhccCCeEEEEecc
Q 019139 272 IGNVSV-----MRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 272 ~g~~~~-----~~~~~~~l~~~~G~~v~~G~ 297 (345)
+..... .......++++ ..++.+-.
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~DivY 222 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMIY 222 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence 774320 01223566775 67766643
No 455
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=92.93 E-value=1.5 Score=38.60 Aligned_cols=99 Identities=22% Similarity=0.226 Sum_probs=60.9
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGG 264 (345)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg 264 (345)
.....++.+||-+|+|. |..+..+++ .++ ++++++.++...+.+++ .+....+.. .++.+. .....+.
T Consensus 43 ~~~~~~~~~vLdiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~ 114 (233)
T PRK05134 43 HAGGLFGKRVLDVGCGG-GILSESMAR-LGA-DVTGIDASEENIEVARLHALESGLKIDYRQ----TTAEEL-AAEHPGQ 114 (233)
T ss_pred hccCCCCCeEEEeCCCC-CHHHHHHHH-cCC-eEEEEcCCHHHHHHHHHHHHHcCCceEEEe----cCHHHh-hhhcCCC
Confidence 33456788899899864 666777766 477 89999999887766653 232211111 122222 1223358
Q ss_pred ccEEEE-----ccCCH-HHHHHHHHHhccCCeEEEEec
Q 019139 265 VDYSFE-----CIGNV-SVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 265 ~d~v~d-----~~g~~-~~~~~~~~~l~~~~G~~v~~G 296 (345)
+|+|+- ..... ..+..+.+.|+++ |++++..
T Consensus 115 fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~g-G~l~v~~ 151 (233)
T PRK05134 115 FDVVTCMEMLEHVPDPASFVRACAKLVKPG-GLVFFST 151 (233)
T ss_pred ccEEEEhhHhhccCCHHHHHHHHHHHcCCC-cEEEEEe
Confidence 999864 33333 3457778889998 9988654
No 456
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=92.92 E-value=0.098 Score=28.34 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=15.7
Q ss_pred eeeeeeccCCCCeEEEEeecCCC
Q 019139 10 CKAAVAWEPNKPLVIEDVQVAPP 32 (345)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~ 32 (345)
|||+++.++++ ..++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999988 99999999875
No 457
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=92.90 E-value=1.6 Score=40.60 Aligned_cols=87 Identities=21% Similarity=0.227 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~ 272 (345)
-.+.+|.|+|.|.+|+..++.++..|. +|++..+.....+.++..|+. +. ++.+.+. ..|+|+-++
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-------sl~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-------SVSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-------CHHHHHh-----cCCEEEEeC
Confidence 357899999999999999999999999 888876665555666666763 21 2222222 478888888
Q ss_pred CCHHH---H-HHHHHHhccCCeEEEE
Q 019139 273 GNVSV---M-RAALECCHKGWGTSVI 294 (345)
Q Consensus 273 g~~~~---~-~~~~~~l~~~~G~~v~ 294 (345)
..+.+ + ...+..++++ ..++.
T Consensus 80 Pd~~t~~V~~~eil~~MK~G-aiL~f 104 (335)
T PRK13403 80 PDEQQAHVYKAEVEENLREG-QMLLF 104 (335)
T ss_pred CChHHHHHHHHHHHhcCCCC-CEEEE
Confidence 75432 2 2345567775 44443
No 458
>PLN00016 RNA-binding protein; Provisional
Probab=92.89 E-value=1 Score=42.92 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=59.4
Q ss_pred CCEEEEE----cC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-----------HHhcCCceEeCCCCCCccHHHHHH
Q 019139 195 GSIVAVF----GL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-----------AKNFGVTEFVNPKDHDKPIQQVLV 258 (345)
Q Consensus 195 g~~VlI~----Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~-----------~~~~g~~~~i~~~~~~~~~~~~~~ 258 (345)
..+|||+ |+ |-+|...+..+...|+ .|++++++...... +...+...+. .+..+ +.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~------~D~~d-~~ 123 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW------GDPAD-VK 123 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE------ecHHH-HH
Confidence 3679999 98 9999999999988998 89998887654221 1122332221 12222 22
Q ss_pred hhcCC-CccEEEEccCCH-HHHHHHHHHhccC-CeEEEEecc
Q 019139 259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKG-WGTSVIVGV 297 (345)
Q Consensus 259 ~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~-~G~~v~~G~ 297 (345)
+.... ++|+|+++.+.. .....+++.++.. -.+++.++.
T Consensus 124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 22233 899999997742 2345566666532 137887764
No 459
>PRK09135 pteridine reductase; Provisional
Probab=92.87 E-value=0.65 Score=40.91 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=29.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
.+.++||+|+ |.+|...+..+...|+ +|+.++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 3578999998 9999999988888999 88888775
No 460
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.84 E-value=0.55 Score=41.69 Aligned_cols=77 Identities=22% Similarity=0.275 Sum_probs=46.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HH-H---HHHhcCCce-E--eCCCCCCccHHHHHHhhcC--CC
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF-D---RAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 264 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~-~---~~~~~g~~~-~--i~~~~~~~~~~~~~~~~~~--gg 264 (345)
.+++|+|+ |++|...+..+...|+ +|+.++++.. .. + .++..+... + .|..+ +.++.+.+..... ++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57899998 9999999998888999 7888776532 21 1 222233321 2 23322 1223333333322 37
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|+++.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999998773
No 461
>PRK07411 hypothetical protein; Validated
Probab=92.83 E-value=0.45 Score=45.77 Aligned_cols=34 Identities=29% Similarity=0.353 Sum_probs=30.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
..+|+|+|+|++|..+++.+.++|.++++.+|.+
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999999888888754
No 462
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=92.83 E-value=0.7 Score=41.99 Aligned_cols=96 Identities=8% Similarity=0.018 Sum_probs=56.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhcC-CC-ccEEEEcc
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD-GG-VDYSFECI 272 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~-gg-~d~v~d~~ 272 (345)
+|+|+|+ |.+|...++.+...|. +|.+.+++.++.. ..+... ..|..+ ++.+.+.+..... .+ +|.+|-+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~---~~~~~~~~~d~~d-~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSA---GPNEKHVKFDWLD-EDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCcccc---CCCCccccccCCC-HHHHHHHHhcccCcCCceeEEEEeC
Confidence 4889998 9999999999999998 7999888876532 123222 123332 1223222221111 25 88888766
Q ss_pred CCH----HHHHHHHHHhccC-CeEEEEecc
Q 019139 273 GNV----SVMRAALECCHKG-WGTSVIVGV 297 (345)
Q Consensus 273 g~~----~~~~~~~~~l~~~-~G~~v~~G~ 297 (345)
+.. .....+++.++.. -.++|.++.
T Consensus 76 ~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 76 PPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 531 2234455555443 136777764
No 463
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=92.80 E-value=0.53 Score=43.06 Aligned_cols=40 Identities=30% Similarity=0.373 Sum_probs=33.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~ 233 (345)
.++-|+|+|+|++|..++.++.+.|++++..++-.+-.++
T Consensus 73 ~~syVVVVG~GgVGSwv~nmL~RSG~qKi~iVDfdqVSls 112 (430)
T KOG2018|consen 73 TNSYVVVVGAGGVGSWVANMLLRSGVQKIRIVDFDQVSLS 112 (430)
T ss_pred cCcEEEEEecCchhHHHHHHHHHhcCceEEEechhhccHh
Confidence 4578888999999999999999999988888876554443
No 464
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=92.79 E-value=1.3 Score=40.77 Aligned_cols=92 Identities=22% Similarity=0.280 Sum_probs=53.3
Q ss_pred CEEEEEcCChHHHH-HHHHHHHcCCCeEEE-EcCChh--HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 196 SIVAVFGLGTVGLA-VAEGAKAAGASRVIG-IDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 196 ~~VlI~Gag~vG~~-a~q~a~~~G~~~vi~-~~~~~~--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
-+|.|+|.|.+|.. +..+.+.-+. .+.+ ++.+.+ .+..++++|..... .++.+.+.+.....+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence 46899999999987 4444444456 4444 445443 34567778754321 123333322111369999999
Q ss_pred cCCHHHHHHHHHHhccCCeEEEEec
Q 019139 272 IGNVSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~~v~~G 296 (345)
++.....+.+..++.. |..++.-
T Consensus 78 T~a~~H~e~a~~a~ea--Gk~VID~ 100 (302)
T PRK08300 78 TSAGAHVRHAAKLREA--GIRAIDL 100 (302)
T ss_pred CCHHHHHHHHHHHHHc--CCeEEEC
Confidence 9986645555555555 4444443
No 465
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.79 E-value=0.58 Score=41.17 Aligned_cols=78 Identities=22% Similarity=0.367 Sum_probs=46.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhcC--C
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLTD--G 263 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~~--g 263 (345)
+.+++|+|+ |++|...+..+...|+ +++.+ +++.++.+.+. ..+.... .|..+ +..+.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 468999998 9999998888888899 78777 77766543332 2222221 12222 1222222222211 3
Q ss_pred CccEEEEccCC
Q 019139 264 GVDYSFECIGN 274 (345)
Q Consensus 264 g~d~v~d~~g~ 274 (345)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 79999988774
No 466
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=92.78 E-value=1.6 Score=39.92 Aligned_cols=45 Identities=29% Similarity=0.362 Sum_probs=39.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhcCCce
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTE 242 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~~~~g~~~ 242 (345)
+|.++|.|..|.-.++=+...|+ .+.+.+++.++ .+.++..|+..
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~ 47 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATV 47 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcc
Confidence 57788999999999999999999 99999999988 88888878753
No 467
>PLN02823 spermine synthase
Probab=92.78 E-value=1.1 Score=41.99 Aligned_cols=99 Identities=18% Similarity=0.131 Sum_probs=60.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCC---CccHHHHHHhhcCCCccEE
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDH---DKPIQQVLVDLTDGGVDYS 268 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~~---~~~~~~~~~~~~~gg~d~v 268 (345)
...+|||+|+|. |..+..+++..+.++|++++.+++-.+.+++.-... .++..+. ..|-.+.+. ...+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~-~~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE-KRDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh-hCCCCccEE
Confidence 446899998753 555667777666678999999999999988753210 1111110 123334443 234589987
Q ss_pred EEccCC------------HHHHH-HHHHHhccCCeEEEEe
Q 019139 269 FECIGN------------VSVMR-AALECCHKGWGTSVIV 295 (345)
Q Consensus 269 ~d~~g~------------~~~~~-~~~~~l~~~~G~~v~~ 295 (345)
|--+.. ...++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 743221 12244 677889998 988754
No 468
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=92.74 E-value=0.49 Score=43.50 Aligned_cols=84 Identities=18% Similarity=0.198 Sum_probs=52.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC--CccHHHHHHhhcCCCccEEEEccCC
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
+|.|+|+|.+|.+.+..+...|. +|+.+++++++.+.+++.|... +..+. .........+. ..+|++|-++..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58899999999998888888898 8999988777777776656432 10000 00000001111 478999998886
Q ss_pred HHHHHHHHHHhc
Q 019139 275 VSVMRAALECCH 286 (345)
Q Consensus 275 ~~~~~~~~~~l~ 286 (345)
.. +..++..++
T Consensus 77 ~~-~~~~~~~l~ 87 (304)
T PRK06522 77 YQ-LPAALPSLA 87 (304)
T ss_pred cc-HHHHHHHHh
Confidence 54 455555444
No 469
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=92.73 E-value=0.69 Score=38.30 Aligned_cols=84 Identities=18% Similarity=0.185 Sum_probs=54.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE------eCCC-CCCccHHHHHHhhcCCCccEEE
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF------VNPK-DHDKPIQQVLVDLTDGGVDYSF 269 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~------i~~~-~~~~~~~~~~~~~~~gg~d~v~ 269 (345)
+|.|+|+|..|.+.+..+...|. +|....++++..+.+++-+.... +... ....++.+.+ .+.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 57899999999999999999998 99999999988777765332100 0000 0012333333 2589999
Q ss_pred EccCCHHHHHHHHHHhcc
Q 019139 270 ECIGNVSVMRAALECCHK 287 (345)
Q Consensus 270 d~~g~~~~~~~~~~~l~~ 287 (345)
-++.+.. .+..++.+++
T Consensus 75 iavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp E-S-GGG-HHHHHHHHTT
T ss_pred ecccHHH-HHHHHHHHhh
Confidence 8888755 6666666655
No 470
>PRK07775 short chain dehydrogenase; Provisional
Probab=92.73 E-value=0.68 Score=41.86 Aligned_cols=78 Identities=18% Similarity=0.161 Sum_probs=48.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg 264 (345)
..+++|+|+ |.+|...++.+...|+ +|+++.++.++.+.+ +..+.... .|..+ .+.+.+.+.+.. -++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 458999998 9999999998888999 888887776654332 22343322 13322 122222222221 247
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 471
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.70 E-value=1 Score=43.94 Aligned_cols=80 Identities=19% Similarity=0.162 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
....+++|.|.|.+|...++.+...|. ++++++.++++.+.+++.+.+ .++.- + ..-.+.+.+..-..+|.++-+
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~g-d--~~~~~~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHG-D--GTDQELLEEEGIDEADAFIAL 304 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEEC-C--CCCHHHHHhcCCccCCEEEEC
Confidence 346889999999999999999999999 899999999988877664322 22222 2 111234444433478999887
Q ss_pred cCCHH
Q 019139 272 IGNVS 276 (345)
Q Consensus 272 ~g~~~ 276 (345)
+++..
T Consensus 305 ~~~~~ 309 (453)
T PRK09496 305 TNDDE 309 (453)
T ss_pred CCCcH
Confidence 77543
No 472
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=92.69 E-value=0.73 Score=40.47 Aligned_cols=104 Identities=22% Similarity=0.240 Sum_probs=65.0
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcCCc----eEeCCCCCCccHHHHHHhhcC
Q 019139 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~g~~----~~i~~~~~~~~~~~~~~~~~~ 262 (345)
......++.+|+-+|+|. |..+..+++..+ ..++++++.++...+.+++.-.. ..+.... .++.+. ....
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~--~~~~ 119 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEAL--PFPD 119 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--cccccC--CCCC
Confidence 344456778999999976 788888888775 23899999999887777653211 1111100 111110 0122
Q ss_pred CCccEEEEccC------CHHHHHHHHHHhccCCeEEEEecc
Q 019139 263 GGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 263 gg~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+.+|+|+.... ....+..+.+.|+++ |+++++..
T Consensus 120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~ 159 (239)
T PRK00216 120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEF 159 (239)
T ss_pred CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEe
Confidence 47898874322 234467888899998 99988765
No 473
>PLN02256 arogenate dehydrogenase
Probab=92.59 E-value=1.1 Score=41.41 Aligned_cols=53 Identities=19% Similarity=0.248 Sum_probs=39.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 240 (345)
+.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++.+|+
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv 79 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGV 79 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCC
Confidence 3344443456789999999999998888888887 8888888764 355556665
No 474
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=92.52 E-value=0.51 Score=43.72 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=54.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCceEeCCCCCCccHHH-HHHhhcCCCccEEEEccCC
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQ-VLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~-~~~~~~~gg~d~v~d~~g~ 274 (345)
+|+|+|+|++|.+.+-.+...|. +|+.+.+..++.+..++- |.. +...... ..+.- .......+.+|++|-|+=+
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~-~~~~~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQA-SLYAIPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcc-eeeccCCCCcccccccCEEEEECCH
Confidence 68999999999987777777888 888888887777666543 432 2111110 00000 0000011378999988776
Q ss_pred HHHHHHHH----HHhccCCeEEEEe
Q 019139 275 VSVMRAAL----ECCHKGWGTSVIV 295 (345)
Q Consensus 275 ~~~~~~~~----~~l~~~~G~~v~~ 295 (345)
.+ ...++ ..+.++ ..++.+
T Consensus 81 ~~-~~~al~~l~~~l~~~-t~vv~l 103 (305)
T PRK05708 81 YD-AEPAVASLAHRLAPG-AELLLL 103 (305)
T ss_pred Hh-HHHHHHHHHhhCCCC-CEEEEE
Confidence 54 33334 344555 555555
No 475
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=92.52 E-value=1.4 Score=40.88 Aligned_cols=57 Identities=18% Similarity=0.183 Sum_probs=46.9
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHhcCCceEeC
Q 019139 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKNFGVTEFVN 245 (345)
Q Consensus 188 ~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~---~~~~~~~~~~~g~~~~i~ 245 (345)
..+.+.||.++||=.. |..|...+-++...|+ +++.+.. +.+|+..++.+|++.+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 5577999999999887 8999999999999999 6666644 457888899999976653
No 476
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=92.51 E-value=0.85 Score=41.69 Aligned_cols=46 Identities=33% Similarity=0.478 Sum_probs=36.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCChhHHHHHHhcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFGV 240 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~-vi~~~~~~~~~~~~~~~g~ 240 (345)
..+|+|.|.|.+|.+.+..++..|... |+..+.+.++.+.+.++|.
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv 49 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGV 49 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCc
Confidence 357888999999999999999999833 4666777766666666665
No 477
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=92.50 E-value=0.69 Score=42.93 Aligned_cols=77 Identities=21% Similarity=0.218 Sum_probs=48.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHH-HhcCC---c-eE--eCCCCCCccHHHHHHhhc--CC
Q 019139 195 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFGV---T-EF--VNPKDHDKPIQQVLVDLT--DG 263 (345)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~-~~~g~---~-~~--i~~~~~~~~~~~~~~~~~--~g 263 (345)
+.+++|+|+ +++|...+..+...| + +|+.+.+++++.+.+ +++.. . .. .|..+ ..+....+.++. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 468999998 999999888888889 7 888888877765433 33321 1 11 23332 122222333321 24
Q ss_pred CccEEEEccC
Q 019139 264 GVDYSFECIG 273 (345)
Q Consensus 264 g~d~v~d~~g 273 (345)
++|+++.+.|
T Consensus 81 ~iD~lI~nAG 90 (314)
T TIGR01289 81 PLDALVCNAA 90 (314)
T ss_pred CCCEEEECCC
Confidence 7999999877
No 478
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=92.49 E-value=0.78 Score=42.52 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=30.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~ 231 (345)
.+.+|+|+|+ |.+|...+..+...|+ +|+++.++..+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4679999998 9999999998888999 78877666543
No 479
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=92.44 E-value=0.73 Score=40.41 Aligned_cols=77 Identities=17% Similarity=0.195 Sum_probs=45.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHH-HHh---cCCce-E--eCCCCCCccHHHHHHhhc--CCC
Q 019139 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR-AKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (345)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~-~~~---~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg 264 (345)
.++||+|+ |++|...+..+...|+ +++++.+ ++++.+. ..+ .+... . .|..+ +.++.+.+.+.. .++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 36899998 9999999999999999 7777766 4433322 222 22211 1 22222 122223332221 247
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999873
No 480
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.44 E-value=0.59 Score=41.87 Aligned_cols=79 Identities=19% Similarity=0.262 Sum_probs=47.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHH-HHHhcCCce---EeCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKFD-RAKNFGVTE---FVNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~-~~~~~g~~~---~i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|+ +++|.+.++.+...|+ +|+.++++. +..+ ..++++... ..|..+ .++..+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4678999985 6999999988888999 888876543 3323 233343211 123322 122333333222 2
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|+++.+.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999998763
No 481
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=92.44 E-value=1.2 Score=35.24 Aligned_cols=92 Identities=25% Similarity=0.380 Sum_probs=50.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChh---HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 197 IVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPK---KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~-~G~~~vi~~~~~~~---~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
+|.|+|+ |-+|...++.+.. .+.+-+-+++++.. ..+...-.|.... .....+.+.++.. .+|+++|+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~------~~~v~~~l~~~~~-~~DVvIDf 74 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPL------GVPVTDDLEELLE-EADVVIDF 74 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-------SSBEBS-HHHHTT-H-SEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCc------ccccchhHHHhcc-cCCEEEEc
Confidence 5889999 9999999999998 57744444555541 1111111111100 0000111222222 38999999
Q ss_pred cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
+ .+......++.+... |.-+++|.
T Consensus 75 T-~p~~~~~~~~~~~~~-g~~~ViGT 98 (124)
T PF01113_consen 75 T-NPDAVYDNLEYALKH-GVPLVIGT 98 (124)
T ss_dssp S--HHHHHHHHHHHHHH-T-EEEEE-
T ss_pred C-ChHHhHHHHHHHHhC-CCCEEEEC
Confidence 8 555566666666664 77777886
No 482
>PRK07578 short chain dehydrogenase; Provisional
Probab=92.43 E-value=2.2 Score=36.35 Aligned_cols=87 Identities=22% Similarity=0.290 Sum_probs=52.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~ 275 (345)
+++|+|+ |++|...+..+... + +|+.++++.. ...+|..+ .++..+.+..+ +++|+++.+.|..
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~----------~~~~D~~~-~~~~~~~~~~~--~~id~lv~~ag~~ 66 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG----------DVQVDITD-PASIRALFEKV--GKVDAVVSAAGKV 66 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC----------ceEecCCC-hHHHHHHHHhc--CCCCEEEECCCCC
Confidence 5899988 99999877766666 6 8888877643 12234333 12222222222 4788888887731
Q ss_pred -------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139 276 -------------------------SVMRAALECCHKGWGTSVIVGVAA 299 (345)
Q Consensus 276 -------------------------~~~~~~~~~l~~~~G~~v~~G~~~ 299 (345)
...+.+.+.++++ |+++.++...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~iss~~ 114 (199)
T PRK07578 67 HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG-GSFTLTSGIL 114 (199)
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcccc
Confidence 1123333445676 8898887543
No 483
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=92.40 E-value=0.77 Score=41.04 Aligned_cols=79 Identities=16% Similarity=0.127 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH----HHHhcCCce---EeCCCCCCccHHHHHHhhc--C
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTE---FVNPKDHDKPIQQVLVDLT--D 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~----~~~~~g~~~---~i~~~~~~~~~~~~~~~~~--~ 262 (345)
.+.+++|+|+ |++|...++.+...|+ +++.+.++. +..+ .++..+... ..|..+ .....+.+.... .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4679999998 9999999999999999 676665533 3222 122233321 123333 122222222221 2
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+++|+++.+.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 478999998874
No 484
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=92.40 E-value=0.65 Score=39.36 Aligned_cols=78 Identities=19% Similarity=0.221 Sum_probs=44.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hHHHHHHhcCCceEeCCCC--CCccHHHHHHhhcC--CC
Q 019139 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAKNFGVTEFVNPKD--HDKPIQQVLVDLTD--GG 264 (345)
Q Consensus 197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-------~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~--gg 264 (345)
++||+|+ |++|...++.+...|..+++.+.++. +..+.+++.|....+..-+ +.+.+.+.+..+.. ++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 6889987 99999999999988887999988882 2344555666643322211 11233333333332 36
Q ss_pred ccEEEEccCC
Q 019139 265 VDYSFECIGN 274 (345)
Q Consensus 265 ~d~v~d~~g~ 274 (345)
++.||-+.|.
T Consensus 82 i~gVih~ag~ 91 (181)
T PF08659_consen 82 IDGVIHAAGV 91 (181)
T ss_dssp EEEEEE----
T ss_pred cceeeeeeee
Confidence 7888888774
No 485
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=92.35 E-value=0.58 Score=48.38 Aligned_cols=79 Identities=24% Similarity=0.390 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCce----EeCCCCCCccHHHHHHhhc--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLT-- 261 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~----~i~~~~~~~~~~~~~~~~~-- 261 (345)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. + .+... ..|..+ ..++.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 3678999998 9999999998888999 8999888876654332 2 23211 123322 122323333221
Q ss_pred CCCccEEEEccCC
Q 019139 262 DGGVDYSFECIGN 274 (345)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (345)
.+++|+++.+.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999883
No 486
>PRK08223 hypothetical protein; Validated
Probab=92.35 E-value=0.43 Score=43.68 Aligned_cols=35 Identities=31% Similarity=0.285 Sum_probs=30.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
.+.+|+|+|+|++|..+++.+.++|..++..+|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34789999999999999999999999888888754
No 487
>PRK13984 putative oxidoreductase; Provisional
Probab=92.29 E-value=0.82 Score=46.61 Aligned_cols=77 Identities=25% Similarity=0.249 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHhcCCceEeCCCCC-
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDH- 249 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~---------------------~~~~~~~~~g~~~~i~~~~~- 249 (345)
.+.+++|+|+|+|+.|+.++..++..|. +|+++++.+ ...+.++++|.+..++..-.
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4578899999999999999999999999 888886543 12455677887655543211
Q ss_pred CccHHHHHHhhcCCCccEEEEccCC
Q 019139 250 DKPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 250 ~~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
+... +.+. ..+|.+|-++|+
T Consensus 359 ~~~~-~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH----hcCCEEEEEcCc
Confidence 1111 1221 269999998885
No 488
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=92.29 E-value=2.9 Score=31.04 Aligned_cols=76 Identities=22% Similarity=0.328 Sum_probs=50.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEEEE-cCChhHHHHH-HhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139 197 IVAVFGLGTVGLAVAEGAKAAG---ASRVIGI-DIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (345)
Q Consensus 197 ~VlI~Gag~vG~~a~q~a~~~G---~~~vi~~-~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~ 271 (345)
+|.++|+|.+|.+.+.-....| . +|+.+ ++++++.+.+ ++++.... . .+..+.+. ..|++|-+
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~-~-----~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQAT-A-----DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEE-S-----EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccc-c-----CChHHhhc-----cCCEEEEE
Confidence 5778899999999999988888 6 77744 8888887766 55664322 1 12233333 37999999
Q ss_pred cCCHHHHHHHHHHh
Q 019139 272 IGNVSVMRAALECC 285 (345)
Q Consensus 272 ~g~~~~~~~~~~~l 285 (345)
+-... +...++.+
T Consensus 69 v~p~~-~~~v~~~i 81 (96)
T PF03807_consen 69 VKPQQ-LPEVLSEI 81 (96)
T ss_dssp S-GGG-HHHHHHHH
T ss_pred ECHHH-HHHHHHHH
Confidence 88755 55555444
No 489
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=92.26 E-value=0.8 Score=40.29 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=64.1
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 261 (345)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~ 261 (345)
.....++++++||=+|+| .|..+..+++..+. .++++++.+++..+.+++ .+.+.+-... .+..+ + .+.
T Consensus 38 l~~l~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~-~-~~~ 111 (231)
T TIGR02752 38 MKRMNVQAGTSALDVCCG-TADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVH---GNAME-L-PFD 111 (231)
T ss_pred HHhcCCCCCCEEEEeCCC-cCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEE---echhc-C-CCC
Confidence 345667889999999986 36677778877642 289999999887776653 2222111000 01100 0 122
Q ss_pred CCCccEEEEccC-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139 262 DGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV 297 (345)
Q Consensus 262 ~gg~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~ 297 (345)
.+.+|+|+-... . ...+..+.+.|+++ |++++.-.
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 347898875322 1 23467788899997 99987643
No 490
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.25 E-value=0.82 Score=41.08 Aligned_cols=78 Identities=21% Similarity=0.375 Sum_probs=46.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC---hhHHHHH-HhcCCceE--eCCCCCCccHHHHHHhhcC--
Q 019139 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID---PKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 262 (345)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~---~~~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~~-- 262 (345)
.+.+++|+|+ +++|.+.++.+...|+ +|+.+.+. +++.+.+ ++++.... .|..+ +++..+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS-DEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC-HHHHHHHHHHHHHHh
Confidence 4678999984 5899999988888999 77776433 2333322 33443222 23332 2233333333322
Q ss_pred CCccEEEEccC
Q 019139 263 GGVDYSFECIG 273 (345)
Q Consensus 263 gg~d~v~d~~g 273 (345)
+++|+++.+.|
T Consensus 83 g~iD~lvnnAG 93 (260)
T PRK06997 83 DGLDGLVHSIG 93 (260)
T ss_pred CCCcEEEEccc
Confidence 47999999876
No 491
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=92.19 E-value=1.4 Score=40.42 Aligned_cols=88 Identities=23% Similarity=0.369 Sum_probs=54.0
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEE-EcCChhH--HHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139 197 IVAVFGLGTVGLAV-AEGAKAAGASRVIG-IDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (345)
Q Consensus 197 ~VlI~Gag~vG~~a-~q~a~~~G~~~vi~-~~~~~~~--~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~ 272 (345)
+|.|+|+|.+|... ..+.+..+. .+.+ ++.+.++ ++.++++|...... ++...+. ...+|+||+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~---~~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLA---NPDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhc---CCCCCEEEECC
Confidence 57899999999864 555555566 5554 4444443 45677888654331 1222221 13799999999
Q ss_pred CCHHHHHHHHHHhccCCeEEEEec
Q 019139 273 GNVSVMRAALECCHKGWGTSVIVG 296 (345)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~~v~~G 296 (345)
+...-.+.+..++..| .-+++-
T Consensus 73 p~~~H~e~a~~al~aG--k~VIde 94 (285)
T TIGR03215 73 SAKAHARHARLLAELG--KIVIDL 94 (285)
T ss_pred CcHHHHHHHHHHHHcC--CEEEEC
Confidence 9876566666666664 444443
No 492
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=92.16 E-value=0.61 Score=44.89 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=30.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (345)
Q Consensus 195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~ 228 (345)
+.+|+|+|+|++|..++..+.++|..+++.+|.+
T Consensus 42 ~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 42 NARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 4689999999999999999999999888888743
No 493
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=92.15 E-value=0.9 Score=43.34 Aligned_cols=79 Identities=24% Similarity=0.262 Sum_probs=46.9
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCCh---h-------------HHHHHHhcCCceE-e--CCCCCC
Q 019139 193 EPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDP---K-------------KFDRAKNFGVTEF-V--NPKDHD 250 (345)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~--a~q~a~~~G~~~vi~~~~~~---~-------------~~~~~~~~g~~~~-i--~~~~~~ 250 (345)
..+.++||+|+ +++|++ .++.+ ..|+ +++++.... + -.+.+++.|.... + |..+ +
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-D 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-H
Confidence 44678899998 899999 45555 8899 777776322 1 1234455665422 2 2222 1
Q ss_pred ccHH---HHHHhhcCCCccEEEEccCCH
Q 019139 251 KPIQ---QVLVDLTDGGVDYSFECIGNV 275 (345)
Q Consensus 251 ~~~~---~~~~~~~~gg~d~v~d~~g~~ 275 (345)
+... +.+.+.. |++|+++.+++.+
T Consensus 116 E~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 2222 2222222 5799999998875
No 494
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Probab=92.15 E-value=1.4 Score=32.13 Aligned_cols=92 Identities=22% Similarity=0.238 Sum_probs=52.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (345)
Q Consensus 198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~ 274 (345)
++-+|+|. |....++++ ....++++++.+++..+.+++ ......+.... .++.+... ...+++|+++....-
T Consensus 2 ildig~G~-G~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~i~~~~~~ 76 (107)
T cd02440 2 VLDLGCGT-GALALALAS-GPGARVTGVDISPVALELARKAAAALLADNVEVLK--GDAEELPP-EADESFDVIISDPPL 76 (107)
T ss_pred eEEEcCCc-cHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHhcccccceEEEE--cChhhhcc-ccCCceEEEEEccce
Confidence 45567754 667777777 344499999999888776652 11111111111 12222211 123479988875442
Q ss_pred -------HHHHHHHHHHhccCCeEEEEe
Q 019139 275 -------VSVMRAALECCHKGWGTSVIV 295 (345)
Q Consensus 275 -------~~~~~~~~~~l~~~~G~~v~~ 295 (345)
...+..+.+.++++ |.+++.
T Consensus 77 ~~~~~~~~~~l~~~~~~l~~~-g~~~~~ 103 (107)
T cd02440 77 HHLVEDLARFLEEARRLLKPG-GVLVLT 103 (107)
T ss_pred eehhhHHHHHHHHHHHHcCCC-CEEEEE
Confidence 34456777788997 988764
No 495
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=92.11 E-value=0.87 Score=40.21 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=46.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHH----HHhcCCceE-e--CCCCCCccHHHHHHhhcC--
Q 019139 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR----AKNFGVTEF-V--NPKDHDKPIQQVLVDLTD-- 262 (345)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~----~~~~g~~~~-i--~~~~~~~~~~~~~~~~~~-- 262 (345)
.+.+++|+|+ |++|...+..+...|+ +|+++. +++++.+. ++..+.+.. + |..+ .+.+.+.+.+...
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 3679999998 9999999998888999 676543 33333322 223333222 1 2222 1222223332221
Q ss_pred CCccEEEEccCC
Q 019139 263 GGVDYSFECIGN 274 (345)
Q Consensus 263 gg~d~v~d~~g~ 274 (345)
+.+|+++.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 496
>PRK14968 putative methyltransferase; Provisional
Probab=92.08 E-value=0.61 Score=39.36 Aligned_cols=42 Identities=36% Similarity=0.586 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 019139 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (345)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~ 236 (345)
..+++++|-.|+| .|..+..+++. +. ++++++.+++..+.++
T Consensus 21 ~~~~~~vLd~G~G-~G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~ 62 (188)
T PRK14968 21 DKKGDRVLEVGTG-SGIVAIVAAKN-GK-KVVGVDINPYAVECAK 62 (188)
T ss_pred ccCCCEEEEEccc-cCHHHHHHHhh-cc-eEEEEECCHHHHHHHH
Confidence 3678889999875 35667777776 66 8999999988776663
No 497
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=92.02 E-value=1.8 Score=40.65 Aligned_cols=37 Identities=32% Similarity=0.441 Sum_probs=32.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~ 231 (345)
.|.+|.|+|.|.+|...++.++..|. +|++.+++.+.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~ 181 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK 181 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence 56789999999999999999999999 89999877643
No 498
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.00 E-value=1.5 Score=40.37 Aligned_cols=82 Identities=21% Similarity=0.212 Sum_probs=59.7
Q ss_pred HHhhcCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcC
Q 019139 186 VWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 262 (345)
Q Consensus 186 l~~~~~~-~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 262 (345)
+.+...+ -.|.+|+|+|- +.+|.-.+.++...|+ .|+++. ++. ++.+.+
T Consensus 148 ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~----------------------~l~e~~----- 199 (296)
T PRK14188 148 LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR----------------------DLPAVC----- 199 (296)
T ss_pred HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC----------------------CHHHHH-----
Confidence 3344444 47899999995 9999999999999999 888873 322 111111
Q ss_pred CCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139 263 GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (345)
Q Consensus 263 gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 298 (345)
...|+++-++|.+..+...+ +++| ..++.+|..
T Consensus 200 ~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 200 RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 14899999999987666554 8897 899999974
No 499
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=91.96 E-value=1.2 Score=38.79 Aligned_cols=98 Identities=16% Similarity=0.127 Sum_probs=69.6
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-C
Q 019139 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-G 264 (345)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g 264 (345)
|.....+.+-..|+=+|+|+ |..+-.++++.....|.+++++.+=++.++....+.-+... .++..... .
T Consensus 22 Lla~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~a--------Dl~~w~p~~~ 92 (257)
T COG4106 22 LLARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEEA--------DLRTWKPEQP 92 (257)
T ss_pred HHhhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceecc--------cHhhcCCCCc
Confidence 33445556667777789985 89999999998755999999999988888776655333221 23344444 6
Q ss_pred ccEEEEccC------CHHHHHHHHHHhccCCeEEE
Q 019139 265 VDYSFECIG------NVSVMRAALECCHKGWGTSV 293 (345)
Q Consensus 265 ~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v 293 (345)
.|++|...- .+..+..++..|+|| |.+.
T Consensus 93 ~dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LA 126 (257)
T COG4106 93 TDLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLA 126 (257)
T ss_pred cchhhhhhhhhhccccHHHHHHHHHhhCCC-ceEE
Confidence 787775533 356789999999997 8764
No 500
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=91.94 E-value=1.7 Score=40.69 Aligned_cols=36 Identities=36% Similarity=0.610 Sum_probs=32.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (345)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~ 230 (345)
.|.++.|+|.|.||.+.++.++..|+ +|+..+++..
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~ 180 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN 180 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC
Confidence 47899999999999999999999999 8999887754
Done!