Query 019144
Match_columns 345
No_of_seqs 120 out of 1286
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 11:35:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zc6_A Probable N-acetylglucos 100.0 4.3E-43 1.5E-47 331.7 32.8 282 22-341 11-295 (305)
2 2e2o_A Hexokinase; acetate and 100.0 1.4E-39 4.8E-44 306.4 34.5 285 23-341 3-289 (299)
3 2ch5_A NAGK protein; transfera 100.0 7.7E-40 2.6E-44 314.0 33.2 302 20-342 4-327 (347)
4 1zbs_A Hypothetical protein PG 100.0 2.9E-40 1E-44 310.5 26.7 280 23-341 1-282 (291)
5 1zxo_A Conserved hypothetical 100.0 1.7E-41 5.7E-46 319.0 11.5 278 23-341 1-280 (291)
6 2qm1_A Glucokinase; alpha-beta 100.0 3.6E-39 1.2E-43 306.6 14.6 291 17-341 1-323 (326)
7 3vgl_A Glucokinase; ROK family 100.0 1.5E-37 5E-42 296.0 12.2 269 22-342 2-315 (321)
8 3vov_A Glucokinase, hexokinase 100.0 6.5E-37 2.2E-41 289.3 15.5 273 23-343 2-299 (302)
9 4htl_A Beta-glucoside kinase; 100.0 2.2E-36 7.5E-41 285.0 18.4 265 18-343 2-295 (297)
10 1z05_A Transcriptional regulat 100.0 4.4E-36 1.5E-40 296.6 19.5 276 21-343 107-419 (429)
11 4db3_A Glcnac kinase, N-acetyl 100.0 1.3E-36 4.3E-41 290.4 13.0 273 23-339 25-326 (327)
12 3r8e_A Hypothetical sugar kina 100.0 5.4E-36 1.8E-40 285.2 16.8 265 18-340 15-320 (321)
13 2hoe_A N-acetylglucosamine kin 100.0 3.4E-36 1.1E-40 293.0 14.5 264 21-343 86-375 (380)
14 3htv_A D-allose kinase, alloki 100.0 4.5E-35 1.6E-39 277.8 18.8 270 21-343 6-303 (310)
15 1z6r_A MLC protein; transcript 100.0 2.8E-35 9.7E-40 288.6 13.9 273 21-341 84-394 (406)
16 2yhw_A Bifunctional UDP-N-acet 100.0 6.8E-35 2.3E-39 279.7 15.9 270 22-342 30-341 (343)
17 2aa4_A Mannac kinase, putative 100.0 2.5E-34 8.6E-39 269.1 18.9 258 23-339 2-288 (289)
18 2ap1_A Putative regulator prot 100.0 5.9E-35 2E-39 278.2 12.8 273 23-339 25-326 (327)
19 2gup_A ROK family protein; sug 100.0 9.4E-34 3.2E-38 265.7 16.8 257 18-341 2-289 (292)
20 3epq_A Putative fructokinase; 100.0 1.3E-31 4.5E-36 253.1 19.2 249 23-343 4-293 (302)
21 1sz2_A Glucokinase, glucose ki 100.0 5.2E-30 1.8E-34 244.9 24.0 276 21-342 13-329 (332)
22 2q2r_A Glucokinase 1, putative 100.0 4.1E-31 1.4E-35 256.5 12.8 274 22-339 29-371 (373)
23 3mcp_A Glucokinase; structural 100.0 7.1E-31 2.4E-35 254.0 10.0 237 18-316 5-286 (366)
24 1saz_A Probable butyrate kinas 100.0 4.9E-29 1.7E-33 242.7 17.2 270 22-339 2-348 (381)
25 1woq_A Inorganic polyphosphate 99.9 3.7E-27 1.3E-31 218.5 14.8 229 22-341 12-263 (267)
26 3lm2_A Putative kinase; struct 99.9 5.7E-26 2E-30 205.7 6.3 192 22-314 6-208 (226)
27 2yhx_A Hexokinase B; transfera 99.9 5.2E-24 1.8E-28 211.0 20.0 290 21-339 60-442 (457)
28 1cza_N Hexokinase type I; stru 99.9 1.1E-23 3.8E-28 224.8 19.4 295 21-339 77-459 (917)
29 1bdg_A Hexokinase; phosphotran 99.9 1.5E-24 5.3E-29 214.8 10.8 291 21-339 67-446 (451)
30 1cza_N Hexokinase type I; stru 99.9 1.1E-21 3.6E-26 209.6 13.3 303 21-340 525-908 (917)
31 3o8m_A Hexokinase; rnaseh-like 99.7 8E-15 2.7E-19 145.6 24.0 289 21-339 79-469 (485)
32 3hm8_A Hexokinase-3; glucose, 99.4 2.3E-11 7.9E-16 119.2 23.2 301 21-339 58-436 (445)
33 3f9m_A Glucokinase; hexokinase 99.4 4E-11 1.4E-15 118.4 23.9 303 21-340 76-461 (470)
34 4ehu_A Activator of 2-hydroxyi 99.0 2.2E-08 7.4E-13 92.3 20.7 245 23-343 2-258 (276)
35 1hux_A Activator of (R)-2-hydr 99.0 1.7E-08 5.9E-13 93.2 19.8 246 23-342 4-259 (270)
36 3g25_A Glycerol kinase; IDP007 98.6 1.9E-07 6.5E-12 93.5 10.3 79 17-104 1-85 (501)
37 3ifr_A Carbohydrate kinase, FG 98.5 1.7E-07 5.7E-12 94.1 8.4 77 19-104 4-86 (508)
38 4e1j_A Glycerol kinase; struct 98.5 4.4E-07 1.5E-11 91.3 10.1 76 20-104 24-105 (520)
39 3h1q_A Ethanolamine utilizatio 98.4 5E-05 1.7E-09 69.1 22.4 133 22-170 28-163 (272)
40 2zf5_O Glycerol kinase; hypert 98.4 6.7E-07 2.3E-11 89.3 10.1 76 20-104 1-82 (497)
41 4ijn_A Acetate kinase, acetoki 98.4 4.8E-05 1.6E-09 73.1 21.3 66 240-314 284-349 (398)
42 2p3r_A Glycerol kinase; glycer 98.4 9.9E-07 3.4E-11 88.5 10.1 74 22-104 3-82 (510)
43 2w40_A Glycerol kinase, putati 98.4 7.9E-07 2.7E-11 89.0 8.9 76 20-104 2-85 (503)
44 3h3n_X Glycerol kinase; ATP-bi 98.3 1.7E-06 5.9E-11 86.6 10.1 74 22-104 5-84 (506)
45 3hz6_A Xylulokinase; xylulose, 98.3 1.6E-06 5.6E-11 86.9 9.9 76 20-105 3-84 (511)
46 3ezw_A Glycerol kinase; glycer 98.3 1.9E-06 6.5E-11 86.7 10.2 74 22-104 4-83 (526)
47 2dpn_A Glycerol kinase; thermu 98.3 1.7E-06 6E-11 86.3 9.6 74 22-104 2-81 (495)
48 2d4w_A Glycerol kinase; alpha 98.3 2.2E-06 7.6E-11 85.7 10.1 74 22-104 2-81 (504)
49 3l0q_A Xylulose kinase; xlylul 98.1 5E-06 1.7E-10 84.2 9.2 72 22-102 5-82 (554)
50 3r9p_A ACKA; ssgcid, seattle s 98.1 0.00084 2.9E-08 64.3 23.3 248 23-313 13-339 (391)
51 2itm_A Xylulose kinase, xylulo 98.1 7.9E-06 2.7E-10 81.2 8.8 71 23-104 1-77 (484)
52 3ll3_A Gluconate kinase; xylul 98.1 1.1E-05 3.9E-10 80.6 9.7 72 22-105 4-81 (504)
53 3jvp_A Ribulokinase; PSI-II, N 98.0 9.8E-06 3.4E-10 82.3 8.3 75 22-104 5-96 (572)
54 3h6e_A Carbohydrate kinase, FG 98.0 9.7E-06 3.3E-10 80.7 7.3 71 19-104 3-78 (482)
55 3bex_A Type III pantothenate k 97.9 7E-05 2.4E-09 68.1 11.9 127 21-170 2-145 (249)
56 3djc_A Type III pantothenate k 97.9 0.00019 6.6E-09 65.8 14.4 126 23-169 3-148 (266)
57 2ivn_A O-sialoglycoprotein end 97.9 0.01 3.6E-07 55.8 26.6 107 23-141 2-115 (330)
58 3i8b_A Xylulose kinase; strain 97.8 4.7E-05 1.6E-09 76.4 9.3 69 22-104 5-74 (515)
59 2uyt_A Rhamnulokinase; rhamnos 97.7 4.4E-05 1.5E-09 75.9 6.1 68 22-102 4-81 (489)
60 4bc3_A Xylulose kinase; transf 97.6 8.8E-05 3E-09 74.7 7.5 78 17-104 6-100 (538)
61 2ews_A Pantothenate kinase; PA 97.5 0.0011 3.9E-08 61.3 13.2 71 254-336 212-285 (287)
62 2e1z_A Propionate kinase; TDCD 97.4 0.07 2.4E-06 51.5 24.3 86 220-314 268-356 (415)
63 3qfu_A 78 kDa glucose-regulate 97.4 0.035 1.2E-06 52.7 22.3 90 69-163 129-223 (394)
64 4gni_A Putative heat shock pro 97.1 0.1 3.5E-06 49.9 22.8 89 69-162 126-221 (409)
65 2h3g_X Biosynthetic protein; p 97.1 0.0096 3.3E-07 54.5 14.2 125 24-169 2-146 (268)
66 3i33_A Heat shock-related 70 k 97.0 0.26 9E-06 46.8 24.0 90 69-163 134-231 (404)
67 3eno_A Putative O-sialoglycopr 96.9 0.26 9.1E-06 46.2 28.0 271 23-337 7-301 (334)
68 1nu0_A Hypothetical protein YQ 96.4 0.012 3.9E-07 48.5 8.3 90 20-135 1-98 (138)
69 3khy_A Propionate kinase; csgi 96.1 0.048 1.6E-06 52.0 11.9 139 146-314 194-339 (384)
70 2iir_A Acetate kinase; transfe 96.0 0.059 2E-06 51.9 12.1 137 147-313 202-347 (403)
71 4h0o_A Acetate kinase; askha ( 95.9 0.052 1.8E-06 52.0 10.8 66 240-314 284-352 (404)
72 3zyy_X Iron-sulfur cluster bin 95.8 0.023 7.9E-07 57.9 8.8 85 7-100 192-295 (631)
73 1g99_A Acetate kinase; alpha/b 95.8 0.052 1.8E-06 52.3 10.7 138 147-314 203-348 (408)
74 3en9_A Glycoprotease, O-sialog 95.8 1.7 6E-05 43.1 26.4 100 23-135 7-113 (540)
75 1iv0_A Hypothetical protein; r 95.3 0.13 4.5E-06 39.5 9.4 82 23-132 2-92 (98)
76 1dkg_D Molecular chaperone DNA 95.3 0.65 2.2E-05 43.7 16.3 91 69-164 111-206 (383)
77 3d2f_A Heat shock protein homo 95.1 2.8 9.7E-05 43.0 21.6 95 69-168 114-221 (675)
78 2v7y_A Chaperone protein DNAK; 95.0 3.1 0.00011 41.0 23.6 91 69-164 85-179 (509)
79 1vhx_A Putative holliday junct 94.6 0.077 2.6E-06 44.1 6.8 95 23-140 4-105 (150)
80 4b9q_A Chaperone protein DNAK; 94.5 4.5 0.00016 40.8 24.4 90 69-163 111-205 (605)
81 3cet_A Conserved archaeal prot 93.9 0.12 4.2E-06 48.4 7.3 81 23-128 1-87 (334)
82 2fxu_A Alpha-actin-1, actin, a 93.7 1.3 4.6E-05 41.6 14.5 92 74-169 79-171 (375)
83 2i7n_A Pantothenate kinase 1; 93.7 1.2 4E-05 42.2 13.8 76 253-338 280-359 (360)
84 2f9w_A Pantothenate kinase; CO 93.6 0.9 3.1E-05 41.3 12.4 121 20-169 21-161 (271)
85 4a2a_A Cell division protein F 93.3 0.24 8.2E-06 48.0 8.6 75 22-105 8-86 (419)
86 1t6c_A Exopolyphosphatase; alp 92.8 0.79 2.7E-05 42.6 11.0 140 16-169 7-161 (315)
87 1k8k_A ARP3, actin-like protei 92.6 1.7 5.8E-05 41.5 13.4 93 74-169 86-186 (418)
88 3sk3_A Acetate kinase, acetoki 92.1 0.11 3.7E-06 50.2 4.2 141 147-313 220-364 (415)
89 1jce_A ROD shape-determining p 91.5 7 0.00024 35.9 16.0 73 96-170 96-171 (344)
90 3r6m_A YEAZ, resuscitation pro 91.4 2.6 8.8E-05 36.8 12.0 96 23-139 3-101 (213)
91 3mdq_A Exopolyphosphatase; str 91.1 1.7 5.9E-05 40.2 11.2 141 19-170 1-155 (315)
92 2ych_A Competence protein PILM 90.5 5.2 0.00018 37.3 14.2 68 22-104 13-85 (377)
93 2a6a_A Hypothetical protein TM 89.9 5.8 0.0002 34.6 13.0 98 22-140 12-112 (218)
94 2gel_A Putative GRAM negative 89.5 6.8 0.00023 34.4 13.3 96 23-139 2-100 (231)
95 3bzc_A TEX; helix-turn-helix, 87.9 5.1 0.00018 41.8 12.8 98 22-139 329-427 (785)
96 3vth_A Hydrogenase maturation 84.1 3.6 0.00012 42.8 9.4 79 253-344 668-752 (761)
97 1u6z_A Exopolyphosphatase; alp 84.0 9.2 0.00031 37.8 12.0 136 23-169 12-160 (513)
98 3psf_A Transcription elongatio 82.3 6.8 0.00023 42.1 10.8 99 22-140 519-629 (1030)
99 3cer_A Possible exopolyphospha 81.7 11 0.00039 35.1 11.1 138 15-165 10-165 (343)
100 4h0p_A Acetate kinase; askha ( 81.7 0.9 3.1E-05 43.9 3.5 68 241-314 302-378 (438)
101 3hi0_A Putative exopolyphospha 81.3 8.2 0.00028 38.1 10.5 137 22-169 15-163 (508)
102 3qb0_A Actin-related protein 4 80.9 26 0.00089 34.4 13.8 93 74-169 92-185 (498)
103 3t69_A Putative 2-dehydro-3-de 80.7 1.7 5.9E-05 40.6 4.9 32 20-60 5-36 (330)
104 3nuw_A 2-OXO-3-deoxygalactonat 80.2 1.9 6.5E-05 39.7 5.0 35 17-61 1-35 (295)
105 3psi_A Transcription elongatio 78.2 11 0.00037 41.3 10.9 99 22-140 516-626 (1219)
106 1yuw_A Heat shock cognate 71 k 77.5 58 0.002 32.1 20.9 95 69-168 115-217 (554)
107 1nbw_A Glycerol dehydratase re 77.2 4.9 0.00017 40.3 7.1 62 22-91 2-63 (607)
108 2d0o_A DIOL dehydratase-reacti 74.6 7.5 0.00026 38.8 7.7 67 22-95 2-68 (610)
109 4g9i_A Hydrogenase maturation 71.8 6.1 0.00021 41.2 6.7 78 255-343 682-763 (772)
110 3htv_A D-allose kinase, alloki 70.7 1.1 3.8E-05 41.2 0.8 32 161-192 152-184 (310)
111 1hjr_A Holliday junction resol 65.7 15 0.00051 30.4 6.6 57 23-91 2-61 (158)
112 4ep4_A Crossover junction endo 65.5 28 0.00095 29.0 8.3 57 23-90 2-64 (166)
113 4fo0_A Actin-related protein 8 65.0 56 0.0019 32.2 12.1 97 70-169 170-269 (593)
114 2kho_A Heat shock protein 70; 64.7 62 0.0021 32.3 12.3 90 69-163 111-205 (605)
115 1xho_A Chorismate mutase; sout 64.0 10 0.00036 30.8 5.1 37 68-104 44-80 (148)
116 3ttc_A HYPF, transcriptional r 62.5 18 0.00062 36.9 7.8 85 242-341 560-653 (657)
117 4am6_A Actin-like protein ARP8 61.4 61 0.0021 32.9 11.3 98 69-169 191-293 (655)
118 1k8k_B ARP2, actin-like protei 58.3 3.5 0.00012 39.1 1.6 70 97-169 106-175 (394)
119 4e1j_A Glycerol kinase; struct 56.5 38 0.0013 33.2 8.9 74 254-340 397-473 (520)
120 3i8b_A Xylulose kinase; strain 56.1 37 0.0013 33.3 8.7 74 255-341 400-473 (515)
121 3dwl_A Actin-related protein 3 55.7 82 0.0028 30.0 10.9 94 74-169 102-202 (427)
122 2zgy_A Plasmid segregation pro 55.0 24 0.00083 32.0 6.8 66 256-337 249-319 (320)
123 2zf5_O Glycerol kinase; hypert 54.9 30 0.001 33.6 7.8 67 264-340 375-441 (497)
124 3g25_A Glycerol kinase; IDP007 54.5 40 0.0014 32.8 8.6 74 254-339 378-451 (501)
125 3ll3_A Gluconate kinase; xylul 54.4 36 0.0012 33.2 8.3 73 255-340 369-441 (504)
126 3ezw_A Glycerol kinase; glycer 54.4 34 0.0012 33.6 8.1 74 254-339 376-449 (526)
127 2yhw_A Bifunctional UDP-N-acet 54.1 0.73 2.5E-05 42.8 -3.9 15 71-85 70-84 (343)
128 3ifr_A Carbohydrate kinase, FG 53.9 52 0.0018 32.1 9.4 74 254-340 375-448 (508)
129 2p3r_A Glycerol kinase; glycer 52.5 46 0.0016 32.5 8.7 75 254-340 375-449 (510)
130 2w40_A Glycerol kinase, putati 50.4 59 0.002 31.5 9.1 75 254-340 380-455 (503)
131 2dpn_A Glycerol kinase; thermu 50.4 49 0.0017 32.1 8.5 48 287-340 399-446 (495)
132 1dbf_A Protein (chorismate mut 50.1 24 0.00082 28.0 4.9 38 68-105 15-52 (127)
133 3h3n_X Glycerol kinase; ATP-bi 49.4 49 0.0017 32.2 8.3 75 254-340 377-451 (506)
134 2d4w_A Glycerol kinase; alpha 48.6 66 0.0023 31.2 9.2 75 254-340 377-451 (504)
135 2itm_A Xylulose kinase, xylulo 47.7 73 0.0025 30.6 9.3 48 287-340 387-435 (484)
136 3qbx_A Anhydro-N-acetylmuramic 47.6 70 0.0024 30.1 8.7 103 22-135 2-131 (371)
137 1ufy_A Chorismate mutase; shik 45.9 30 0.001 27.3 4.8 38 68-105 14-52 (122)
138 3l0q_A Xylulose kinase; xlylul 45.2 41 0.0014 33.2 7.1 47 287-339 443-489 (554)
139 3jvp_A Ribulokinase; PSI-II, N 44.1 37 0.0013 33.7 6.6 75 254-340 414-488 (572)
140 1z6r_A MLC protein; transcript 43.5 1.4 4.6E-05 42.0 -4.0 14 164-177 252-265 (406)
141 3ven_A O-carbamoyltransferase 41.1 1.1E+02 0.0037 30.6 9.3 66 24-102 12-77 (576)
142 3aap_A Ectonucleoside triphosp 39.7 2.3E+02 0.0079 26.1 11.1 128 22-162 3-156 (353)
143 4bc3_A Xylulose kinase; transf 38.7 97 0.0033 30.3 8.6 48 287-340 435-482 (538)
144 2fxu_A Alpha-actin-1, actin, a 38.4 55 0.0019 30.3 6.5 48 288-338 295-348 (375)
145 2hoe_A N-acetylglucosamine kin 33.3 4.2 0.00014 38.3 -2.3 15 70-84 128-142 (380)
146 4db3_A Glcnac kinase, N-acetyl 33.2 2.4 8.1E-05 39.2 -4.0 32 161-192 166-208 (327)
147 3vgl_A Glucokinase; ROK family 32.1 2.8 9.5E-05 38.5 -3.7 26 164-190 162-187 (321)
148 3zx3_A Ectonucleoside triphosp 30.0 1.4E+02 0.0049 28.7 8.0 139 20-162 32-197 (452)
149 3cqy_A Anhydro-N-acetylmuramic 29.7 2.2E+02 0.0074 26.7 8.9 103 23-135 6-137 (370)
150 2uyt_A Rhamnulokinase; rhamnos 28.4 1.6E+02 0.0054 28.2 8.1 73 254-340 367-440 (489)
151 1jce_A ROD shape-determining p 28.1 79 0.0027 28.5 5.6 45 288-338 279-324 (344)
152 3hz6_A Xylulokinase; xylulose, 27.5 88 0.003 30.4 6.1 46 287-340 403-451 (511)
153 3cj1_A Ectonucleoside triphosp 27.4 1.6E+02 0.0054 28.4 7.8 108 21-135 33-159 (456)
154 3h6e_A Carbohydrate kinase, FG 26.9 80 0.0027 30.6 5.6 62 266-340 374-436 (482)
155 3sk3_A Acetate kinase, acetoki 25.9 66 0.0023 30.8 4.7 26 16-41 12-38 (415)
156 1yuw_A Heat shock cognate 71 k 25.6 29 0.00098 34.4 2.2 47 286-339 330-379 (554)
157 2ych_A Competence protein PILM 25.6 1.8E+02 0.0062 26.4 7.7 20 22-41 191-210 (377)
158 2kho_A Heat shock protein 70; 25.1 73 0.0025 31.8 5.1 49 285-338 332-380 (605)
159 3vov_A Glucokinase, hexokinase 24.5 4.2 0.00014 37.0 -3.9 33 161-193 144-177 (302)
160 2l7a_A Talin-1; vinculin, bund 22.9 2.8E+02 0.0097 21.9 8.3 52 220-277 38-94 (131)
161 2ap1_A Putative regulator prot 22.2 3.5 0.00012 37.8 -5.1 12 23-34 37-48 (327)
162 2zgy_A Plasmid segregation pro 22.1 61 0.0021 29.2 3.5 85 83-168 84-186 (320)
163 3qb0_A Actin-related protein 4 20.2 1.7E+02 0.0059 28.5 6.5 66 266-337 394-469 (498)
No 1
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=4.3e-43 Score=331.68 Aligned_cols=282 Identities=26% Similarity=0.340 Sum_probs=234.8
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCcccc--ceeE
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV--RAVC 99 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i--~~Ig 99 (345)
.|+||||+|+|+++++++|+ +|+++.+.+.++.++. .+++++++.+.+.+++++++.+.++.+| .+||
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~---------~G~il~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~ig 80 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS---------DGTPLAMAEGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIG 80 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET---------TCCEEEEEEESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEEEEcCccceEEEEEcC---------CCCEEEEEeCCCCCcc-cCHHHHHHHHHHHHHHHHHhcCCChhhhccceEE
Confidence 49999999999999999999 8999998876544443 5789999999999999999888777676 7999
Q ss_pred EeecCCCChhHHHHHHHHHHhhCC-CCceEEEeCcHHHHHhcccCCCCCeEEEEeCccceeeeecCCCCeEEeccCCCCc
Q 019144 100 LAVSGVNHPTDQQRILNWLRDIFP-GNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPIL 178 (345)
Q Consensus 100 ig~pG~~~~~~~~~l~~~L~~~~~-~~~pV~v~NDa~~a~~~~~~g~~~~v~v~~GTG~~g~gi~~dG~~~~~Gg~G~~~ 178 (345)
||+||+++++.+.. |+++|+ . .||+|+||+|++++++. +.++++++++|||++|++++.||+++++|||||+.
T Consensus 81 ig~pG~v~~~~~~~----l~~~~~~~-~pv~v~NDa~aaa~ge~-~~~~~v~v~~GTGigg~~i~~~G~~~~aGe~Gh~~ 154 (305)
T 1zc6_A 81 LGLSGVHNRQWAGE----FESQAPGF-ARLSLATDGYTTLLGAH-GGQPGIIVALGTGSIGEALYPDGSHREAGGWGYPS 154 (305)
T ss_dssp EEESCCCTTSHHHH----HHHTCCCC-SEEEEECHHHHHHHHHT-TTSSEEEEEESSSEEEEEECTTSCEEEESCCCTTT
T ss_pred EEecCCCchHHHHH----HHHhCCCC-ceEEEECCHHHHHHhhc-CCCCeEEEEecCCeEEEEEeCCCcEEEecCccccc
Confidence 99999998877653 677783 2 89999999999998874 45789999999998677776699999999999999
Q ss_pred CCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcchHHHHHHHHcCCHHHHHH
Q 019144 179 GDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKI 258 (345)
Q Consensus 179 gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~a~~gD~~a~~i 258 (345)
+|+|+++||||+++.+...+.|++.|.|++.++++++++ .+.+.|+++++.. ....++.+++.|++++ +||+.|+++
T Consensus 155 ~d~g~~~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~~v~~~a-~GD~~A~~i 231 (305)
T 1zc6_A 155 GDEASGAWLGQRAAQLTQMALDGRHSHSPLTRAVLDFVG-GDWQAMMAWNGRA-TPAQFARLAPLVLSAA-RVDPEADAL 231 (305)
T ss_dssp SCTTSHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHT-SSHHHHHHHHHTC-CHHHHHTTHHHHHHHT-TTCHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHC-cCHHHHHHHHhcc-CHHHHHHHHHHHHHHc-CCCHHHHHH
Confidence 999999999999999888888999999999999999987 4577788776642 2233445678899999 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHH
Q 019144 259 LQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAW 338 (345)
Q Consensus 259 l~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~ 338 (345)
+++++++|+..++++++. | |+.|||+||+.....++ |.+.+++. +..++.++++||+++++
T Consensus 232 ~~~~~~~L~~~l~~l~~~-~--------p~~VvlgGgv~~~~~~~-l~~~l~~~---------i~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 232 LRQAGEDAWAIARALDPQ-D--------ELPVALCGGLGQALRDW-LPPGFRQR---------LVAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHCTT-C--------CSCEEEESHHHHHTGGG-SCHHHHHH---------CCCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcC-C--------CCeEEEECCchHhHHHH-HHHHHHhh---------ccCCCCCHHHHHHHHHh
Confidence 999999999999999988 8 59999999998654444 46666553 22356889999999988
Q ss_pred Hhh
Q 019144 339 NSF 341 (345)
Q Consensus 339 ~~~ 341 (345)
+.+
T Consensus 293 ~~~ 295 (305)
T 1zc6_A 293 RPS 295 (305)
T ss_dssp ---
T ss_pred hhc
Confidence 654
No 2
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=100.00 E-value=1.4e-39 Score=306.38 Aligned_cols=285 Identities=26% Similarity=0.406 Sum_probs=237.8
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
|+||+|+|+|+++++++|+ +|+++.+.+.+++++.+.+++++++.+.+.+++++++. +.+||||+
T Consensus 3 ~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~------~~~igi~~ 67 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC---------EGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGE------ADVVGMGV 67 (299)
T ss_dssp CEEEEEECSSCEEEEEECT---------TSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSC------CSEEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHhcC------CCEEEEEc
Confidence 8999999999999999999 89999988776654322578999999999999987642 57999999
Q ss_pred cCCCChh-HHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCCCeEEEEeCccceeeeecCCCCeEEeccCCCCcCCc
Q 019144 103 SGVNHPT-DQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDW 181 (345)
Q Consensus 103 pG~~~~~-~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~~~v~v~~GTG~~g~gi~~dG~~~~~Gg~G~~~gd~ 181 (345)
||+ +++ ...++.+.|++ |+ .||+++||+|++++++.+ .++++++++|||++..|. ..|...++|||||+.+++
T Consensus 68 ~G~-~~~~~~~~l~~~l~~-~~--~pv~v~ND~~aaa~~e~~-~~~~v~l~~GTG~i~~g~-~~G~~~~aGE~Gh~~~~~ 141 (299)
T 2e2o_A 68 AGL-DSKFDWENFTPLASL-IA--PKVIIQHDGVIALFAETL-GEPGVVVIAGTGSVVEGY-NGKEFLRVGGRGWLLSDD 141 (299)
T ss_dssp TTC-CSHHHHHHHHHHHTT-SS--SEEEEEEHHHHHHHHHHT-TSCEEEEEESSSEEEEEE-CSSCEEEEECSCTTTCCT
T ss_pred CCC-CchhHHHHHHHHHHh-CC--CCEEEeCcHHHHHhhccC-CCCeEEEEecCCEEEEEE-cCCeEEecCCcCCCcCCC
Confidence 999 543 44689999999 97 899999999999998865 468999999999767776 578889999999999999
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcC-CChHHHhcchHHHHHHHHcCCHHHHHHHH
Q 019144 182 GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD-PSWARIAALVPVVVSCAEAGDEVANKILQ 260 (345)
Q Consensus 182 G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~v~~~a~~gD~~a~~il~ 260 (345)
|+.|+||++.++....+.++..+.+.+.+.+.+.++..+...+.++.+.. .+..+++..++.|++++++||+.|+++++
T Consensus 142 g~~c~cG~~gl~~~~~~le~~~s~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~a~~gd~~a~~il~ 221 (299)
T 2e2o_A 142 GSAYWVGRKALRKVLKMMDGLENKTILYNKVLKTINVKDLDELVMWSYTSSCQIDLVASIAKAVDEAANEGDTVAMDILK 221 (299)
T ss_dssp TSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCHHHHHTTHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHhCCCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 99999999998888888999999999999888877755566677666531 12233344678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHHHh
Q 019144 261 DSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 340 (345)
Q Consensus 261 ~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~~~ 340 (345)
+++++|+..++|+++.|| |+.||++|++... +. +.+.+++.+.+. .+.....++++++||+.++++.
T Consensus 222 ~~~~~La~~i~~l~~~l~--------p~~IvlgGgv~~~-~~--~~~~l~~~~~~~--~i~~~~~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 222 QGAELLASQAVYLARKIG--------TNKVYLKGGMFRS-NI--YHKFFTLYLEKE--GIISDLGKRSPEIGAVILAYKE 288 (299)
T ss_dssp HHHHHHHHHHHHHHHHHT--------CSEEEEESGGGGS-HH--HHHHHHHHHHHT--TCEEECCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC--------CCEEEEECCccCc-HH--HHHHHHHHCCCC--eEeccCCCCChHHHHHHHHHHh
Confidence 999999999999999999 5999999999987 54 488899888775 2332224588999999999987
Q ss_pred h
Q 019144 341 F 341 (345)
Q Consensus 341 ~ 341 (345)
+
T Consensus 289 ~ 289 (299)
T 2e2o_A 289 V 289 (299)
T ss_dssp H
T ss_pred h
Confidence 3
No 3
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=100.00 E-value=7.7e-40 Score=313.96 Aligned_cols=302 Identities=23% Similarity=0.323 Sum_probs=244.7
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCcc-cccee
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRS-AVRAV 98 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~-~i~~I 98 (345)
|..|+||||+|+|+++++++|+ +|+++.+.+.++.+..+.+++++++.+.+.+++++++.+.++. +|.+|
T Consensus 4 M~~~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gi 74 (347)
T 2ch5_A 4 MAAIYGGVEGGGTRSEVLLVSE---------DGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSL 74 (347)
T ss_dssp SSCEEEEEEECTTCEEEEEEET---------TSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEE
T ss_pred cceEEEEEEcCccceEEEEEeC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEE
Confidence 3349999999999999999999 8999998876444432247899999999999999998887666 79999
Q ss_pred EEeecCCCChhHHHHHHHHHHhhCCC-CceEEEeCcHHHHHhcccCCCCCeEEEEeCccceeeeecCCCCeEEeccCCCC
Q 019144 99 CLAVSGVNHPTDQQRILNWLRDIFPG-NVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPI 177 (345)
Q Consensus 99 gig~pG~~~~~~~~~l~~~L~~~~~~-~~pV~v~NDa~~a~~~~~~g~~~~v~v~~GTG~~g~gi~~dG~~~~~Gg~G~~ 177 (345)
|||+||+++++.+.++++.|+++|+. ..||+|+||+|+++++ .++ ++++++++|||++++.+..+|+..+||+|||+
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a-~~~-~~~v~v~~GTGig~~~v~~~G~~c~cG~~G~l 152 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT-ATP-DGGVVLISGTGSNCRLINPDGSESGCGGWGHM 152 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH-HCS-SCEEEEEESSSEEEEEECTTSCEEEEECCCTT
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh-hCC-CCcEEEEEcCCceeEEEcCCCCEEecCCcCcc
Confidence 99999999988788999999999951 1799999999999887 443 58999999999966656568999999999999
Q ss_pred cCCcCcHHHHHHHHHHHHHHHhcCCCCC----ChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcchHHHHHHHHcCCH
Q 019144 178 LGDWGSGYGIAAQALTAVIRAYDGRGPD----TMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDE 253 (345)
Q Consensus 178 ~gd~G~a~~iG~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~a~~gD~ 253 (345)
.+|++|+++++++.+.......|++.+. +.+.+.+.+.++..+...++.+++.......++.+++.|++++++||+
T Consensus 153 ~~de~s~~~i~~~~~~~~~~~~dg~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~gD~ 232 (347)
T 2ch5_A 153 MGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDP 232 (347)
T ss_dssp TCCTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHHHHTTCH
T ss_pred cCCCccHHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 9999999999999888777777887653 456677777666545566666555422233444457899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCc--------cEEEEcCcccCcccccchHHHHHHHHhhC--C----C
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSF--------PLVMVGGVLEANRRWDIGREVVKCILRDY--P----G 319 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~--------~IVlgGgl~~~~~~~~l~~~~~~~l~~~~--~----~ 319 (345)
.|++++++++++|+.+++|+++.+|| + .|||+||+....+. +.+.+++.++++. + .
T Consensus 233 ~a~~il~~~~~~La~~i~~l~~~~~p--------~~~~~~~~~~IvlgGgv~~~~~~--~~~~~~~~l~~~~~~~~~~~~ 302 (347)
T 2ch5_A 233 LSRYIFRKAGEMLGRHIVAVLPEIDP--------VLFQGKIGLPILCVGSVWKSWEL--LKEGFLLALTQGREIQAQNFF 302 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGSCG--------GGGCSTTCEEEEEESGGGGGHHH--HHHHHHHHHHHHC---CCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc--------cccccCCCceEEEECCcccCcHH--HHHHHHHHHHhhccccccccC
Confidence 99999999999999999999999995 7 89999999987654 4888999998763 2 2
Q ss_pred ceee--CCCCChHHHHHHHHHHhhh
Q 019144 320 AVPI--RPKVEPAVGAALLAWNSFM 342 (345)
Q Consensus 320 ~~i~--~~~~a~~~GAa~la~~~~~ 342 (345)
+++. ....++++||++++++.+.
T Consensus 303 ~~i~~~~~~~a~~~GAa~la~~~~~ 327 (347)
T 2ch5_A 303 SSFTLMKLRHSSALGGASLGARHIG 327 (347)
T ss_dssp SEEEEEEESSCTHHHHHHHHHHTTT
T ss_pred CceEEEecCCChHHHHHHHHHHhcC
Confidence 3333 2234999999999987653
No 4
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=2.9e-40 Score=310.52 Aligned_cols=280 Identities=21% Similarity=0.246 Sum_probs=225.9
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
++||||+|+|+|+++++| + ++++.+.+.++.++...+++++++.+.+.+++++ +.+..++.+||||+
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~---------g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~~i~~igig~ 67 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-E---------GKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAI---GQKASSIRAVYFYG 67 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-T---------TEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHH---TTSTTTCCEEEEEE
T ss_pred CEEEEEeCccceEEEEEe-C---------CeEEEEEECCCCCcccCCHHHHHHHHHHHHHHHh---CCCcccccEEEEEC
Confidence 479999999999999999 4 7888888765555432478889999998888764 23344688999999
Q ss_pred cCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCCCeEEEEeCccceeeeecCCCCeEEeccCCCCcCCcC
Q 019144 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDWG 182 (345)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~~~v~v~~GTG~~g~gi~~dG~~~~~Gg~G~~~gd~G 182 (345)
||++ ++...++++.|+++|+...||+|+||+|++++++. +.++++++++|||++|++++.||+++++|||||+++|+|
T Consensus 68 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~-g~~~~v~v~~GTGigg~~i~~~G~~~~aGe~G~~~~d~g 145 (291)
T 1zbs_A 68 AGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC-GDSEGIACILGTGSNSCLFDGREIKANVSPLGYILGDEG 145 (291)
T ss_dssp TTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT-TTSCEEEEEESSSEEEEEECSSSEEEECCCCHHHHCCTT
T ss_pred CCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc-CCCCcEEEEecCChheEEECCCCcEEEeCCCccccCCCc
Confidence 9998 66667899999999971139999999999999874 667899999999997788888999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCC-ChHHHhcchHHHHHHHHcCCHHHHHHHHH
Q 019144 183 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP-SWARIAALVPVVVSCAEAGDEVANKILQD 261 (345)
Q Consensus 183 ~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~v~~~a~~gD~~a~~il~~ 261 (345)
++|||||+++.+.+.+ +. .+.+.++++++++. +.+++.++.|... ++.+++++++.|++ ++||+.|++++++
T Consensus 146 ~~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ia~~a~~v~~--~~GD~~A~~i~~~ 218 (291)
T 1zbs_A 146 SGAVLGRLFIGSLLKG---QM-PEGLCEAFLQEYGL-TSADIIESVYRKPFPNRFLAGFSPFIAQ--HLDIPAVYSLVQN 218 (291)
T ss_dssp SHHHHHHHHHHHHHTT---CS-CTTHHHHHHHHTTC-CHHHHHHHHHHSSCHHHHHHTTHHHHHT--TTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCc-CHHHHHHHHHcCCCCHHHHHHhhHHHHH--hCCCHHHHHHHHH
Confidence 9999999998765433 22 67888888888874 3566777665432 22456667788888 8999999999999
Q ss_pred HHHHHHHHHHHHHHHh-ccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHHHh
Q 019144 262 SVEELALSVKAVVQRL-SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 340 (345)
Q Consensus 262 ~~~~Lg~~l~~lv~~l-d~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~~~ 340 (345)
++++|+..+ .++.+ | |+.||++||++.. + .+.+++.++++.+ ++..+.+++++||+.++++.
T Consensus 219 ~~~~La~~i--~~~~~~~--------p~~vvlgGGv~~~---~--~~~l~~~l~~~~~--~i~~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 219 SFDDFLVRN--VLRYNRP--------DLPLHFIGSVAFH---Y--REVLSSVIKKRGL--TLGSVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHH--TGGGCCT--------TSCEEEESHHHHH---T--HHHHHHHHHHTTC--CEEEEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHH--hcccCCC--------CceEEEECchHHh---h--HHHHHHHHHHcCC--eecccCcCHHHHHHHHHHhh
Confidence 999999999 46666 7 6999999999865 4 6788888887653 33445589999999999876
Q ss_pred h
Q 019144 341 F 341 (345)
Q Consensus 341 ~ 341 (345)
+
T Consensus 282 ~ 282 (291)
T 1zbs_A 282 H 282 (291)
T ss_dssp C
T ss_pred h
Confidence 5
No 5
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=1.7e-41 Score=319.01 Aligned_cols=278 Identities=19% Similarity=0.227 Sum_probs=211.8
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
|+||||+|+|+|+++++| + ++++.+.+.++.++...+++++++.+.+.+++++. ..++.+||||+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~---------g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igig~ 65 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-N---------GAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLP-----EGKFNAVYFYG 65 (291)
T ss_dssp ---CEECCTTCEEEEEEC-S---------SSEEEEEEECCCCTTTSCSTTTTTTTTC------------------CEEEC
T ss_pred CEEEEEeccccEEEEEEc-C---------CeEEEEEECCCCCcccCCHHHHHHHHHHHHHHhcC-----cccccEEEEEc
Confidence 479999999999999999 4 78888877666554323677788888888877653 23578999999
Q ss_pred cCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCCCeEEEEeCccceeeeecCCCCeEEeccCCCCcCCcC
Q 019144 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDWG 182 (345)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~~~v~v~~GTG~~g~gi~~dG~~~~~Gg~G~~~gd~G 182 (345)
||++ ++...++++.|+++|+...||+|+||+|++++++. +.++++++++|||++|++++.||+++++|||||+++|+|
T Consensus 66 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~-g~~~~v~v~~GTGi~g~gi~~~G~~~~aGe~Gh~~~d~g 143 (291)
T 1zxo_A 66 AGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC-GQKAGIACILGTGSNSCFYNGKEIVSNISPLGFILGDEG 143 (291)
T ss_dssp TTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT-TTSCBEEEEESSSEEEEEECSSSEEEECCCCCTTTSCCS
T ss_pred CCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc-CCCCcEEEEeCCChheEEECCCCcEEEeCCCccccCCCc
Confidence 9998 65556899999999971039999999999999875 667899999999997788999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCC-ChHHHhcchHHHHHHHHcCCHHHHHHHHH
Q 019144 183 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP-SWARIAALVPVVVSCAEAGDEVANKILQD 261 (345)
Q Consensus 183 ~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~v~~~a~~gD~~a~~il~~ 261 (345)
++|+|||+++.+.+.+ +. .+.+.+.+.+.++. +.+++.+++|... ++..++.+++.|++ ++||+.|++++++
T Consensus 144 ~~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ia~~a~~v~~--~~GD~~A~~i~~~ 216 (291)
T 1zxo_A 144 SGAVLGKLLVGDILKN---QL-PATLKEEFLKQFDL-TPPEIIDRVYRQPFPNRFLASLSPFIAQ--HLEEPAIRQLVMN 216 (291)
T ss_dssp SHHHHHHHHHHHGGGT---CS-CSHHHHHHHHHHTC-CHHHHGGGTTTSSCSTTTSSTTTHHHHT--TTTSTTTTHHHHH
T ss_pred hHHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCC-CHHHHHHHHhcCCCCHHHHHHhhHHHHH--hCCCHHHHHHHHH
Confidence 9999999988654332 33 67888888887764 3555666554321 22345556788888 8999999999999
Q ss_pred HHHHHHHHHHHHHHHh-ccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHHHh
Q 019144 262 SVEELALSVKAVVQRL-SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 340 (345)
Q Consensus 262 ~~~~Lg~~l~~lv~~l-d~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~~~ 340 (345)
++++|+..+ + ++.+ | |+.||++||++.. | .+++++.+++ |.+++..+++++++||++++++.
T Consensus 217 ~~~~La~~i-~-~~~~~~--------p~~vvlgGGv~~~---l--~~~l~~~l~~--~~~~i~~~~~a~~~GAa~la~~~ 279 (291)
T 1zxo_A 217 SFIAFFRRN-V-MQYDYK--------QYPVHFIGSIAYC---Y--KEILQDAARQ--TGIQIGKILQSPMEGLIQYHSQL 279 (291)
T ss_dssp HHHHHHTTT-G-GGSCTT--------TSCEEECSHHHHH---T--HHHHHHHTTT--TTCCEEEECSCTHHHHHTTSSSC
T ss_pred HHHHHHHHH-h-cccCCC--------CceEEEECcHHHH---H--HHHHHHHHhc--CCcEEeecCCCHHHHHHHHHHHH
Confidence 999999999 4 5555 7 6999999999865 5 7888888877 55666666789999999998765
Q ss_pred h
Q 019144 341 F 341 (345)
Q Consensus 341 ~ 341 (345)
+
T Consensus 280 ~ 280 (291)
T 1zxo_A 280 S 280 (291)
T ss_dssp C
T ss_pred h
Confidence 4
No 6
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=100.00 E-value=3.6e-39 Score=306.58 Aligned_cols=291 Identities=15% Similarity=0.074 Sum_probs=219.5
Q ss_pred ccCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 019144 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (345)
Q Consensus 17 ~~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~ 96 (345)
+|+|+.|+||||+|+|+++++++|+ +|+++.+.+.++... .+++++++.+.+.+++++++.+.++.++.
T Consensus 1 ~~~m~~~~lgiDiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~ 69 (326)
T 2qm1_A 1 SNAMDKKIIGIDLGGTTIKFAILTT---------DGVVQQKWSIETNIL--EDGKHIVPSIIESIRHRIDLYNMKKEDFV 69 (326)
T ss_dssp CCGGGCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCT--TTTTTHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCcccEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHHHcCCCcccee
Confidence 4678789999999999999999999 899999887765432 46788999999999999999888777899
Q ss_pred eeEEeecCCCChhH----------H--H-HHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccce
Q 019144 97 AVCLAVSGVNHPTD----------Q--Q-RILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTI 158 (345)
Q Consensus 97 ~Igig~pG~~~~~~----------~--~-~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~ 158 (345)
+|||++||+++++. | . +|++.|+++|+ .||+|+||+|+++++++ .+.++++++++|||+
T Consensus 70 ~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~--~pv~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGi- 146 (326)
T 2qm1_A 70 GIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALG--IPFALDNDANVAALGERWKGAGENNPDVIFITLGTGV- 146 (326)
T ss_dssp EEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-
T ss_pred EEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhC--CCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCce-
Confidence 99999999864322 1 4 78999999998 89999999999988763 245789999999996
Q ss_pred eeeecCCCCeEE-----eccCCCCcCCcC-cHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCC
Q 019144 159 AYGFTEDGRDAR-----AAGAGPILGDWG-SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP 232 (345)
Q Consensus 159 g~gi~~dG~~~~-----~Gg~G~~~gd~G-~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 232 (345)
|+|++.||++++ +|||||+..+++ ..|+||++.|.+.. .+...+.+.+.+.+.......++.+.+.+.
T Consensus 147 G~giv~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~gcle~~------~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 220 (326)
T 2qm1_A 147 GGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETV------SSATGVVRVARHLSEEFAGDSELKQAIDDG 220 (326)
T ss_dssp EEEEEETTEECCCSSSCTTCGGGSBSCTTSCBCTTSSBCBTHHH------HSHHHHHHHHHHHTTTCCSCCHHHHHHHHT
T ss_pred EEEEEECCEEeecCCCcccccCcEEECCCCCcCCCCCccchHhh------hCHHHHHHHHHHHhhcccccchhhhccccc
Confidence 788999999987 899999988754 34555543322111 011222222222222111112222222100
Q ss_pred ChHHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHH
Q 019144 233 SWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKC 312 (345)
Q Consensus 233 ~~~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~ 312 (345)
.....+.|++++++||+.|++++++++++|+..++++++.|| |+.|||+|++....+.+ .+.+++.
T Consensus 221 ----~~~~~~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~--------p~~IvlgGg~~~~~~~~--~~~l~~~ 286 (326)
T 2qm1_A 221 ----QDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLN--------PDSVVIGGGVSAAGEFL--RSRVEKY 286 (326)
T ss_dssp ----CCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEEESGGGGTHHH--HHHHHHH
T ss_pred ----cCCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEcChhhhchHHH--HHHHHHH
Confidence 011357899999999999999999999999999999999999 58999999999775554 8899999
Q ss_pred HHhhCC-----CceeeCC---CCChHHHHHHHHHHhh
Q 019144 313 ILRDYP-----GAVPIRP---KVEPAVGAALLAWNSF 341 (345)
Q Consensus 313 l~~~~~-----~~~i~~~---~~a~~~GAa~la~~~~ 341 (345)
++++.+ .++|..+ ++++++||++++++.+
T Consensus 287 l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~~~ 323 (326)
T 2qm1_A 287 FQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQFS 323 (326)
T ss_dssp HHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGGGC
T ss_pred HHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHHhh
Confidence 988732 3556543 4678999999998765
No 7
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=100.00 E-value=1.5e-37 Score=296.02 Aligned_cols=269 Identities=18% Similarity=0.099 Sum_probs=206.9
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEe
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig 101 (345)
.|+||+|+|+|+++++++|+ +|+++.+.+.+++ .+++++++.+.+.+++++++ .++.+|||+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~---------~G~i~~~~~~~~~----~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~ 63 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE---------EGRILSTFKVATP----PTAEGIVDAICAAVAGASEG-----HDVEAVGIG 63 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TCCBCCCEEEECC----SSHHHHHHHHHHHHHHHHTT-----CCEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC---------CCCEEEEEEeeCC----CCHHHHHHHHHHHHHHHHhh-----cCceEEEEe
Confidence 49999999999999999999 8999988876552 47899999999999998754 268999999
Q ss_pred ecCCCChhH----------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccceeeeecC
Q 019144 102 VSGVNHPTD----------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (345)
Q Consensus 102 ~pG~~~~~~----------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~g~gi~~ 164 (345)
+||+++++. | .++++.|+++|+ .||+++||+|++++++. .+.++++++++|||+ |+|++.
T Consensus 64 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~ 140 (321)
T 3vgl_A 64 AAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGL-GGGIII 140 (321)
T ss_dssp ESSEECTTSSCEEECSSSCCEEECHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEE
T ss_pred ccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhC--CCEEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcce-EEEEEE
Confidence 999976542 1 478999999998 89999999999988763 345789999999996 778999
Q ss_pred CCCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhc----CCCh-
Q 019144 165 DGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV----DPSW- 234 (345)
Q Consensus 165 dG~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~- 234 (345)
||++++ +||+||+..++ ++..|.|+..+|++.+.+ ...|.+.+.. .+..
T Consensus 141 ~G~l~~G~~g~aGEiGh~~v~~------------------~g~~c~cG~~gclE~~~S---~~al~~~~~~~~~~~~~~~ 199 (321)
T 3vgl_A 141 GNKLRRGRFGVAAEFGHIRVVP------------------DGLLCGCGSQGCWEQYAS---GRALVRYAKQRANATPENA 199 (321)
T ss_dssp TTEECCCTTSCCCCGGGSBSST------------------TCSBCTTSCBSBGGGTSS---HHHHHHHHHHHHHHCGGGC
T ss_pred CCEEecCCCCCCccccceEecC------------------CCCCCCCCCcCcHHHhcC---HHHHHHHHHHHhhcCCcch
Confidence 999986 66666665543 333344444445555432 4445443321 0000
Q ss_pred ---------HHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccc
Q 019144 235 ---------ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDI 305 (345)
Q Consensus 235 ---------~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l 305 (345)
.......+.|++++++||+.|++++++++++|+..++|+++.|| |+.|||+|++....+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~--------p~~IvlgGgi~~~~~~l-- 269 (321)
T 3vgl_A 200 AVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFD--------PSAFIVGGGVSDEGELV-- 269 (321)
T ss_dssp HHHHHTTTSSSTTCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGTHHH--
T ss_pred hhhhhcccCccccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeChhhcchHHH--
Confidence 00011357899999999999999999999999999999999999 59999999999876554
Q ss_pred hHHHHHHHHhhCC------CceeeCC---CCChHHHHHHHHHHhhh
Q 019144 306 GREVVKCILRDYP------GAVPIRP---KVEPAVGAALLAWNSFM 342 (345)
Q Consensus 306 ~~~~~~~l~~~~~------~~~i~~~---~~a~~~GAa~la~~~~~ 342 (345)
++++++.++++.+ .++|..+ ++++++||++++.+.+.
T Consensus 270 ~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~~~~~ 315 (321)
T 3vgl_A 270 LDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQGLE 315 (321)
T ss_dssp HHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHHhhhh
Confidence 8889999987632 3566653 57899999999988764
No 8
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=100.00 E-value=6.5e-37 Score=289.34 Aligned_cols=273 Identities=19% Similarity=0.178 Sum_probs=211.1
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
|+||+|+|+|+++++++|+ + .++.+.+.+++. ..++++++.+.+.+++++++. ..++.+|||++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~---------~-~~l~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~ 65 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDG---------K-RLLSKVVVPTPK---EGGERVAEALAEAAERAEREA---GVRGEAIGLGT 65 (302)
T ss_dssp CEEEEEECSSEEEEEEECS---------S-SBSCCEEEECCS---SCHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEE
T ss_pred EEEEEEEcCCEEEEEEEeC---------C-CcEEEEEEcCCC---CChHHHHHHHHHHHHHHHhhc---cCCceEEEEEe
Confidence 8999999999999999999 6 445665555432 244889999999999998765 34689999999
Q ss_pred cCCCChhH-----------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccceeeeecC
Q 019144 103 SGVNHPTD-----------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (345)
Q Consensus 103 pG~~~~~~-----------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~g~gi~~ 164 (345)
||+++++. | .++++.|+++|+ .||+++||+|++++++. .+.++++++++|||+ |+|++.
T Consensus 66 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~ 142 (302)
T 3vov_A 66 PGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATG--RPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGI-GGGVVL 142 (302)
T ss_dssp SSCEETTTTEEC---CCTTCTTCCHHHHHHHHHS--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EEEEEE
T ss_pred cccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhC--CCEEEEechHHHHHHHHHhCCCCCCCCEEEEEECCce-eEEEEE
Confidence 99975432 2 368899999998 89999999999988864 346789999999997 778999
Q ss_pred CCCeEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcchHHH
Q 019144 165 DGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVV 244 (345)
Q Consensus 165 dG~~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v 244 (345)
||++++ |..|.++|+||..+. .++..|.|+...|++.+.+ ...|.+.+..... .....+.|
T Consensus 143 ~g~l~~--------G~~g~aGEiGh~~v~-----~~g~~c~cg~~gclE~~~s---~~~l~~~~~~~~~---~~~~~~~i 203 (302)
T 3vov_A 143 GGRVLR--------GERGQGGELGHLTLL-----PGGPACGCGLEGCLEALAA---GRALERDATYAFQ---RPVDTREL 203 (302)
T ss_dssp TTEECC--------CTTSCTTCGGGSBSS-----TTCCBCTTSCBSBHHHHHS---HHHHHHHHHHHHT---SCCCHHHH
T ss_pred CCEEee--------CCCCCCccccceEec-----CCCCCCCCCCcchHHHHhC---HHHHHHHHHHhhC---CCCCHHHH
Confidence 999986 555555666665442 3555566766677777764 5666655432000 01135688
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcc-cCcccccchHHHHHHHHhhCC---Cc
Q 019144 245 VSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL-EANRRWDIGREVVKCILRDYP---GA 320 (345)
Q Consensus 245 ~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~-~~~~~~~l~~~~~~~l~~~~~---~~ 320 (345)
++++++||+.|++++++++++|+..++|+++.|| |+.|||+|++. ...+.+ .+.+++.+.++.+ ..
T Consensus 204 ~~~a~~gd~~a~~~~~~~~~~l~~~i~~l~~~~~--------p~~ivlgG~i~~~~~~~l--~~~l~~~l~~~~~~~~~~ 273 (302)
T 3vov_A 204 FRLFQAGDPKAERLVLQAARYVGIGLASLVKAFD--------PGVVVLGGGVALNAPEGY--WEALLEAYRRYLQGWEAP 273 (302)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESHHHHTSCHHH--HHHHHHHHHHTTTTSCCC
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEeChhHhhhhHHH--HHHHHHHHHHhcchhcCC
Confidence 9999999999999999999999999999999999 59999999999 766554 9999999988732 12
Q ss_pred eeeCC---CCChHHHHHHHHHHhhhc
Q 019144 321 VPIRP---KVEPAVGAALLAWNSFMN 343 (345)
Q Consensus 321 ~i~~~---~~a~~~GAa~la~~~~~~ 343 (345)
.|..+ ++++++||++++++++.+
T Consensus 274 ~i~~s~lg~~a~~~GAa~l~~~~~~~ 299 (302)
T 3vov_A 274 PLRRARLGAEAGLLGAALTAYLEVKD 299 (302)
T ss_dssp CEEECSSGGGHHHHHHHHHHHHHHHH
T ss_pred cEEEcCCCCcHHHHHHHHHHHHHhhc
Confidence 34433 578999999999988764
No 9
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=100.00 E-value=2.2e-36 Score=284.99 Aligned_cols=265 Identities=14% Similarity=0.108 Sum_probs=197.5
Q ss_pred cCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 019144 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (345)
Q Consensus 18 ~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~ 97 (345)
+.| |+||+|+|+|+++++++|+ +|+++.+.+.++.. .+++++++.+.+. +.+ ..++.+
T Consensus 2 ~~m--~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~----~~~----~~~i~g 59 (297)
T 4htl_A 2 NAM--KIAAFDIGGTALKMGVVLP---------HGEIILTKSAEISG---SDGDQILAEMKVF----LAE----NTDVTG 59 (297)
T ss_dssp --C--CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECST---TCHHHHHHHHHHH----HHT----CTTCCE
T ss_pred Ccc--EEEEEEeCCCeEEEEEECC---------CCCEEEEEEecCCC---CCHHHHHHHHHHH----Hhh----cCCeeE
Confidence 345 8999999999999999999 89999988776542 2456666655543 332 236899
Q ss_pred eEEeecCCCChhH-----------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCcccee
Q 019144 98 VCLAVSGVNHPTD-----------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIA 159 (345)
Q Consensus 98 Igig~pG~~~~~~-----------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~g 159 (345)
|||++||+++++. | .+|++.|+++|+ .||+++||+|+++++++ .+.++++++++|||+ |
T Consensus 60 igi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~pV~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G 136 (297)
T 4htl_A 60 IAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETG--LPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGI-G 136 (297)
T ss_dssp EEEEESSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-E
T ss_pred EEEecCcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHC--cCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcce-E
Confidence 9999999976431 2 368999999998 89999999999988874 346789999999997 7
Q ss_pred eeecCCCCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhc--CC
Q 019144 160 YGFTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV--DP 232 (345)
Q Consensus 160 ~gi~~dG~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~ 232 (345)
+|++.||++++ +||+||+..+..+.+ |+...|++.+. +...|.+.+.. ..
T Consensus 137 ~giv~~G~l~~G~~g~aGEiGh~~~~~~~~~--------------------~~~~~~le~~~---s~~~l~~~~~~~~~~ 193 (297)
T 4htl_A 137 GGIFSNGELVRGGRFRAGEFGYMFSERPGAF--------------------RPGKYTLNETT---TMLVLRRQYAELTGR 193 (297)
T ss_dssp EEEEETTEECCCTTSCCCCGGGSBSSCCCSS--------------------CGGGGBHHHHS---SHHHHHHHHHHHHCC
T ss_pred EEEEECCEEEecCCCCcccccceEecCCCCc--------------------CcccCcHHHhc---cHHHHHHHHHHHhcC
Confidence 78999999986 677777765532211 11122334443 24555544321 01
Q ss_pred ChHHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHH
Q 019144 233 SWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKC 312 (345)
Q Consensus 233 ~~~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~ 312 (345)
+... ...+.|++++++||+.|++++++++++|+.+++|+++.|| |+.|||+|++... +.| ++.+++.
T Consensus 194 ~~~~--~~~~~i~~~a~~gd~~a~~~~~~~~~~La~~i~~l~~~~~--------p~~IvlgGgi~~~-~~~--~~~l~~~ 260 (297)
T 4htl_A 194 PLEE--ITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFD--------PTHIFIGGGITSR-PTF--IAELKHH 260 (297)
T ss_dssp CGGG--CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGS-TTH--HHHHHHH
T ss_pred CccC--CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCccccc-HHH--HHHHHHH
Confidence 1111 1347899999999999999999999999999999999999 5999999999975 444 8899999
Q ss_pred HHhhC-CCceeeC---CCCChHHHHHHHHHHhhhc
Q 019144 313 ILRDY-PGAVPIR---PKVEPAVGAALLAWNSFMN 343 (345)
Q Consensus 313 l~~~~-~~~~i~~---~~~a~~~GAa~la~~~~~~ 343 (345)
+.++. +.++|.. .++++++||++++++.+.+
T Consensus 261 l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~~~~ 295 (297)
T 4htl_A 261 MESFGLRDTIIETATHKNQAGLLGAVYHFLQEENR 295 (297)
T ss_dssp HTTTCCTTCEEEECSCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHhccCCCeEEECCcCChHHHHhHHHHHHHHhcc
Confidence 98763 3456654 3678999999999988754
No 10
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=100.00 E-value=4.4e-36 Score=296.61 Aligned_cols=276 Identities=12% Similarity=0.095 Sum_probs=214.7
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
..|+||||+|+|+++++++|+ +|+++.+.+.+... .+++++++.+.+.+++++++.+.+..+|.+|||
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 174 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHEL---------GGEVLIDTKIDIHE---IDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAI 174 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEET---------TSCEEEEEEEECCC---CBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEE
T ss_pred CCEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCCC---CCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEE
Confidence 469999999999999999999 89999988765532 368999999999999999998877778999999
Q ss_pred eecCCCChhH----------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccceeeeec
Q 019144 101 AVSGVNHPTD----------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFT 163 (345)
Q Consensus 101 g~pG~~~~~~----------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~g~gi~ 163 (345)
++||+++++. | .++++.|+++|+ .||+|+||+|++++++. .+.++++++++|||+ |+|++
T Consensus 175 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~--~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi-G~giv 251 (429)
T 1z05_A 175 TLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATG--LPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGL-GAGIV 251 (429)
T ss_dssp EESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEE
T ss_pred eccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcE-EEEEE
Confidence 9999975432 2 478999999998 89999999999988863 245789999999997 77899
Q ss_pred CCCCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhc---CCChH
Q 019144 164 EDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV---DPSWA 235 (345)
Q Consensus 164 ~dG~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~ 235 (345)
.||++++ +|||||+..++++ ..|.|+..+|++.+.+ ...|.+.+.. .....
T Consensus 252 ~~G~l~~G~~g~AGEiGH~~v~~~g------------------~~c~cG~~gclE~~~S---~~al~~~~~~~~~~~~~~ 310 (429)
T 1z05_A 252 LDGRVLQGRHGNIGELGHIQIDPQG------------------KRCHCGNYGCLETVAS---SQAIRDQVTARIQAGEPS 310 (429)
T ss_dssp ETTEECCTTTTCTTBCTTSBCCTTC------------------CBCTTSCBSBTHHHHS---HHHHHHHHHHHHHTTCCC
T ss_pred ECCEEeeCCCCcccccCceEEcCCC------------------CCCCCCCCcchHHHhC---HHHHHHHHHHHhhccccc
Confidence 9999986 7888888776532 1233333344455543 4445444321 00000
Q ss_pred H----HhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHH
Q 019144 236 R----IAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVK 311 (345)
Q Consensus 236 ~----~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~ 311 (345)
. .....+.|++++++||+.|++++++++++|+.++++++++|| |+.|||+|++....+.+ .+.+++
T Consensus 311 ~l~~~~~~~~~~i~~~a~~gD~~a~~il~~~~~~L~~~i~~l~~~ld--------P~~IvlgG~i~~~~~~l--~~~l~~ 380 (429)
T 1z05_A 311 CLATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFN--------PEKILIGGVINQAKSIL--YPSIEQ 380 (429)
T ss_dssp TTTTCSSCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGHHHH--HHHHHH
T ss_pred ccccccCCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEeCccccchHHH--HHHHHH
Confidence 0 012357899999999999999999999999999999999999 59999999999865554 888999
Q ss_pred HHHhh-CC----CceeeC---CCCChHHHHHHHHHHhhhc
Q 019144 312 CILRD-YP----GAVPIR---PKVEPAVGAALLAWNSFMN 343 (345)
Q Consensus 312 ~l~~~-~~----~~~i~~---~~~a~~~GAa~la~~~~~~ 343 (345)
.+.++ +| .++|.. .++ +++||+.++++.+..
T Consensus 381 ~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~~~~~~ 419 (429)
T 1z05_A 381 CIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIKQALYD 419 (429)
T ss_dssp HHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHHHHHHT
T ss_pred HHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHHHHHhh
Confidence 99876 32 355554 356 999999999987643
No 11
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=100.00 E-value=1.3e-36 Score=290.43 Aligned_cols=273 Identities=18% Similarity=0.083 Sum_probs=210.3
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
|+||+|+|+|+++++++|+ +|+++.+.+.++++ .+++++++.+.+.++++..+.+ .+.+|||++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~~ 88 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE---------KLERVATERVPTPT---DDYPLLLETIAGLVAKYDQEFA----CEGKIGLGL 88 (327)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCT---TCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE
T ss_pred EEEEEEECCCEEEEEEEeC---------CCcEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence 7899999999999999999 89999988876543 3789999999999999887654 368999999
Q ss_pred cCCCChhH---------H---HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccceeeeecCC
Q 019144 103 SGVNHPTD---------Q---QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTED 165 (345)
Q Consensus 103 pG~~~~~~---------~---~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~g~gi~~d 165 (345)
||++++++ | .++++.|+++|+ .||+|+||+|++++++. .+.++++++++|||+ |+|++.|
T Consensus 89 pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~--~pV~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGi-G~gii~~ 165 (327)
T 4db3_A 89 PGMEDADDATVLTVNVPAAKGKPLRADLEAKIG--RSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGF-GGGLIYE 165 (327)
T ss_dssp SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHS--SCCEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSE-EEEEEET
T ss_pred eccEeCCCCEEEcCCCccccCCCHHHHHHHHHC--CCEEEecchhHHHHHHHHhCCCCCCCcEEEEEeCccc-eEEEEEC
Confidence 99977532 2 478999999998 89999999999999874 235678999999997 7789999
Q ss_pred CCeEEeccCCCCcCCcCcHHHHHHHHHHHHHH-----HhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcc
Q 019144 166 GRDARAAGAGPILGDWGSGYGIAAQALTAVIR-----AYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAAL 240 (345)
Q Consensus 166 G~~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (345)
|++++ |..|.++|+||..+..... ..++..|.|+...|++.+.+ ...|.+.+..... ....
T Consensus 166 G~l~~--------G~~g~aGEiGh~~v~~~~~~~~~~~~~g~~C~cG~~gclE~~~S---~~al~~~~~~~~~---~~~~ 231 (327)
T 4db3_A 166 GKVFS--------GRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKGCLDSYLS---GRGFELLYAHYYG---EEKK 231 (327)
T ss_dssp TEECC--------CTTSCTTCGGGSBCCHHHHHHTCTTCCCCBCTTSCBSBGGGTSS---HHHHHHHHHHHHS---CCCC
T ss_pred CEEee--------cCCCcCcccccEEeccccccccccccCCCcCCCCCcchhHhhhC---HHHHHHHHHHhcC---CCCC
Confidence 99986 4444455555544321100 01566677776777776653 5666665432000 0113
Q ss_pred hHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhC---
Q 019144 241 VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY--- 317 (345)
Q Consensus 241 ~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~--- 317 (345)
.+.|++++++||+.|++++++++++|+..++|+++.|| |+.|||+|++... +. |.+.+++.+.++.
T Consensus 232 ~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~--------p~~IvlgGgi~~~-~~--l~~~l~~~l~~~~~~~ 300 (327)
T 4db3_A 232 AIDIIKANAAGDEKAAEHVERFMELLAICFGNIFTAND--------PHVVALGGGLSNF-EL--IYEEMPKRVPKYLLSV 300 (327)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGC-TH--HHHHHHHHGGGGSCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCcccch-HH--HHHHHHHHHHHHhccc
Confidence 56889999999999999999999999999999999999 5999999999875 44 4888999998873
Q ss_pred -CCceeeCC---CCChHHHHHHHHHH
Q 019144 318 -PGAVPIRP---KVEPAVGAALLAWN 339 (345)
Q Consensus 318 -~~~~i~~~---~~a~~~GAa~la~~ 339 (345)
+.++|..+ ++++++||++++++
T Consensus 301 ~~~~~i~~s~lg~~a~~~GAa~l~l~ 326 (327)
T 4db3_A 301 AKCPKIIKAKHGDSGGVRGAAFLNIK 326 (327)
T ss_dssp CCCCEEEECSCGGGHHHHHHHHTTCC
T ss_pred cCCCEEEECCCCCcHHHHHHHHHHhc
Confidence 23556543 57899999998764
No 12
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=100.00 E-value=5.4e-36 Score=285.19 Aligned_cols=265 Identities=19% Similarity=0.162 Sum_probs=202.0
Q ss_pred cCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 019144 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (345)
Q Consensus 18 ~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~ 97 (345)
...+.|+||+|+|+|+++++++|+ +|+++.+.+.++... .+++++++.+.+.++++++ ...++.+
T Consensus 15 ~~~~~~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~----~~~~i~g 79 (321)
T 3r8e_A 15 LYFQGMILGIDVGGTSVKFGLVTP---------EGEIQNATRFMTADW--VNGIGFVESMKLEIGNFLK----QYPIVKG 79 (321)
T ss_dssp ----CCEEEEECCSSEEEEEEECT---------TCCEEEEEEEEHHHH--HTTTCHHHHHHHHHHHHHH----HCTTCCE
T ss_pred hccCcEEEEEEECCCEEEEEEEcC---------CCcEEEEEEEeCCCC--CCHHHHHHHHHHHHHHHHh----ccCCeeE
Confidence 334569999999999999999999 899999887654322 4678899999999999886 2347899
Q ss_pred eEEeecCCCChhH-----------H--HHHHHHHHhhC-CCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccce
Q 019144 98 VCLAVSGVNHPTD-----------Q--QRILNWLRDIF-PGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTI 158 (345)
Q Consensus 98 Igig~pG~~~~~~-----------~--~~l~~~L~~~~-~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~ 158 (345)
|||++||+++++. | .++++.|+++| + .||+|+||+|++++++. .+.++++++++|||+
T Consensus 80 igi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~--~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi- 156 (321)
T 3r8e_A 80 VGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPH--IHFKIENDAKCAALGEYYFGENKRMQTFILLALGTGV- 156 (321)
T ss_dssp EEEEESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTT--SEEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-
T ss_pred EEEEecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCC--CCEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCce-
Confidence 9999999976432 2 47899999999 7 89999999999988763 356789999999996
Q ss_pred eeeecCCCCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhc---
Q 019144 159 AYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV--- 230 (345)
Q Consensus 159 g~gi~~dG~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 230 (345)
|+|++.||++++ +|||||+. +++.+ |++.+.+ ...|.+.+..
T Consensus 157 G~gii~~G~l~~G~~g~aGEiGh~~-~~~~g--------------------------clE~~~S---~~al~~~~~~~~~ 206 (321)
T 3r8e_A 157 GSGVMMNGKLFIGGRGNGTEVGHML-TTRGK--------------------------SLENQVG---INHLIAYTHEQLA 206 (321)
T ss_dssp EEEEEETTEECCCTTSCCCCGGGCB-CTTSS--------------------------BSHHHHS---HHHHHHHHHHHHH
T ss_pred EEEEEECCEEecCCCCCCccccccc-CCCCC--------------------------cHHHhcC---HHHHHHHHHHHhh
Confidence 778999999987 88888887 65411 1122221 2333332211
Q ss_pred -C-CC---hH-HHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCccccc
Q 019144 231 -D-PS---WA-RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWD 304 (345)
Q Consensus 231 -~-~~---~~-~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~ 304 (345)
. +. .. ......+.|++++++||+.|++++++++++|+.+++|+++.|| |+.|||+|++....+.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~ld--------P~~IvlgG~i~~~~~~l- 277 (321)
T 3r8e_A 207 LDVAKKSSLHTIAELSPKVIADHAAQGDALALAVWADIGTIIGESLVNIVRVMD--------LNNILLGGGISGAFDYF- 277 (321)
T ss_dssp HCTTCCCSGGGCSSCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEESGGGGGHHHH-
T ss_pred ccCcccccccccccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEeChhcccchHH-
Confidence 0 00 00 0011357899999999999999999999999999999999999 59999999999765554
Q ss_pred chHHHHHHHHhhC-----CCceeeCC---CCChHHHHHHHHHHh
Q 019144 305 IGREVVKCILRDY-----PGAVPIRP---KVEPAVGAALLAWNS 340 (345)
Q Consensus 305 l~~~~~~~l~~~~-----~~~~i~~~---~~a~~~GAa~la~~~ 340 (345)
.+.+++.++++. +.++|..+ ++++++||+++++++
T Consensus 278 -~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~~~ 320 (321)
T 3r8e_A 278 -VPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIMEA 320 (321)
T ss_dssp -HHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHHC-
T ss_pred -HHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHHhh
Confidence 889999998873 24566654 578999999999875
No 13
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=100.00 E-value=3.4e-36 Score=293.01 Aligned_cols=264 Identities=14% Similarity=0.127 Sum_probs=208.4
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
..|+||+|+|+|+++++++|+ +|+++.+.+.+.... .+++++++.+.+.+++++++.+.+..++.+|||
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~---------~G~vl~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 154 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDA---------SMNILAHEAHPLPSQ--SDREETLNVMYRIIDRAKDMMEKLGSKLSALTV 154 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCeEEEEEECCCEEEEEEECC---------CCCEEEEEEEccCCC--CCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEE
Confidence 359999999999999999999 899999887755432 478999999999999999988766668999999
Q ss_pred eecCCCChhH----------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-CCC--CCeEEEEeCccceeeeecCC
Q 019144 101 AVSGVNHPTD----------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT-MGK--LHGCVLIAGTGTIAYGFTED 165 (345)
Q Consensus 101 g~pG~~~~~~----------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-~g~--~~~v~v~~GTG~~g~gi~~d 165 (345)
|+||+++++. | .++++.|+++|+ .||+|+||+|++++++. .+. ++++++++|||+ |+|++.|
T Consensus 155 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~g~~~~~~v~l~~GtGi-G~giv~~ 231 (380)
T 2hoe_A 155 AAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYG--IEVWVENDADMGAVGEKWYTKRDDSFAWILTGKGI-GAGIIID 231 (380)
T ss_dssp EESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHC--SEEEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSC-EEEEEET
T ss_pred EeeccEECCCCEEeccCCCCCcCCChHHHHHHHhC--CCEEEechHHHHHHHHHHhCCCCCcEEEEEeCCce-EEEEEEC
Confidence 9999976432 2 478999999998 89999999999999874 232 789999999997 7789999
Q ss_pred CCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcc
Q 019144 166 GRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAAL 240 (345)
Q Consensus 166 G~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (345)
|++++ +|||||+..+++ ..|.|+..+|++.+++ ...|.+ .
T Consensus 232 G~l~~G~~g~aGEiGh~~v~~~-------------------~~c~cG~~gclE~~~s---~~~l~~-------------~ 276 (380)
T 2hoe_A 232 GELYRGENGYAGEIGYTRVFNG-------------------NEYVFLEDVCNENVVL---KHVLSM-------------G 276 (380)
T ss_dssp TEECCCSSSCCCCGGGCEEECS-------------------SSEEEHHHHHCHHHHH---HHHHHH-------------C
T ss_pred CEEeccCCCccccccceEecCC-------------------CCCCCCCccHHHHHcC---HHHHHH-------------H
Confidence 99986 555555544332 2344555566666653 333332 1
Q ss_pred hHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCC--
Q 019144 241 VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP-- 318 (345)
Q Consensus 241 ~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~-- 318 (345)
.+.+++++++||+.|++++++++++|+..+++++++|| |+.|||+|++....+. +.+.+++.+.++.+
T Consensus 277 ~~~v~~~a~~gD~~a~~~l~~~~~~La~~i~~l~~~ld--------P~~IvlgG~~~~~~~~--l~~~l~~~l~~~~~~~ 346 (380)
T 2hoe_A 277 FSSLAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFG--------ISKIVIGGFFKELGEN--FLKKIKIEVETHLLYK 346 (380)
T ss_dssp CC-TTHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEEEGGGGGHHH--HHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEcCchhhhhHH--HHHHHHHHHHHhcCCC
Confidence 33577888999999999999999999999999999999 5999999999876554 48899999988742
Q ss_pred -CceeeC---CCCChHHHHHHHHHHhhhc
Q 019144 319 -GAVPIR---PKVEPAVGAALLAWNSFMN 343 (345)
Q Consensus 319 -~~~i~~---~~~a~~~GAa~la~~~~~~ 343 (345)
.++|.. .++++++||+.++++.+..
T Consensus 347 ~~~~i~~s~~~~~a~~~GAa~l~~~~~~~ 375 (380)
T 2hoe_A 347 HSVDMSFSKVQEPVIAFGAAVHALENYLE 375 (380)
T ss_dssp CCCEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCcHHHHHHHHHHHHHHhc
Confidence 345553 3567899999999987653
No 14
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=100.00 E-value=4.5e-35 Score=277.76 Aligned_cols=270 Identities=14% Similarity=0.143 Sum_probs=189.9
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
..|+||+|+|+|+++++++|+ +|+++.+.+.++.+ ..++++++.+.+.+++++++.+ .++.+|||
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~---~~i~gigi 70 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRTA---------EGETLHCEKKRTAE---VIAPGLVSGIGEMIDEQLRRFN---ARCHGLVM 70 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEEHHH---HHTTCHHHHHHHHHHHHHHHHT---EEEEEEEE
T ss_pred CCEEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCcc---ccHHHHHHHHHHHHHHHHHhcC---CCeeEEEE
Confidence 469999999999999999999 89999887654432 2346688888888888877654 25899999
Q ss_pred eecCCCChhH-------------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc----CCCCCeEEEEeCccceeee
Q 019144 101 AVSGVNHPTD-------------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT----MGKLHGCVLIAGTGTIAYG 161 (345)
Q Consensus 101 g~pG~~~~~~-------------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~----~g~~~~v~v~~GTG~~g~g 161 (345)
|+||+++++. + .+|++.|+++|+ .||+++||+|++++++. .+.++.+++++|||+ |+|
T Consensus 71 ~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~--~pv~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtGi-G~g 147 (310)
T 3htv_A 71 GFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLN--CPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGM-GFA 147 (310)
T ss_dssp EESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHT--SCEEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSE-EEE
T ss_pred eccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhC--CCEEEeeHHHHHHHHHHhhcccCCceEEEEEeceeE-EEE
Confidence 9999976431 1 368999999998 89999999999876542 345678999999997 778
Q ss_pred ecCCCCeEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcch
Q 019144 162 FTEDGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALV 241 (345)
Q Consensus 162 i~~dG~~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (345)
++.||++++ |.+|.++|+||..+. .++..|.|+..+|++.+. +...|.+++..... . ...
T Consensus 148 ii~~G~l~~--------G~~g~aGEiGh~~v~-----~~g~~C~cG~~GclE~~~---S~~al~~~~~~~~~--~--~~~ 207 (310)
T 3htv_A 148 VWMNGAPWT--------GAHGVAGELGHIPLG-----DMTQHCACGNPGCLETNC---SGMALRRWYEQQPR--N--YPL 207 (310)
T ss_dssp EEETTEEEC--------CSSSCCCC--------------------------CCSS---SHHHHHHHHTTSCC--S--SCG
T ss_pred EEECCEEee--------cCCCCceeCcceEeC-----CCCCcCCCCCCceehhhh---CHHHHHHHHHhccC--C--CCH
Confidence 999999997 666666677776653 345556666677776654 35667666543111 1 123
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhC--C-
Q 019144 242 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY--P- 318 (345)
Q Consensus 242 ~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~--~- 318 (345)
+.+++++ ++|+.+.++++++ +.+|++++++|| |+.|||+|++....+.+ .+.+++.++++. +
T Consensus 208 ~~~~~~~-~~d~~~~~~~~~~----a~~la~l~~~~d--------P~~IvlgG~v~~~~~~~--~~~l~~~l~~~~~~~~ 272 (310)
T 3htv_A 208 RDLFVHA-ENAPFVQSLLENA----ARAIATSINLFD--------PDAVILGGGVMDMPAFP--RETLVAMTQKYLRRPL 272 (310)
T ss_dssp GGHHHHH-TTCHHHHHHHHHH----HHHHHHHHHHHC--------CSEEEEECTTTTSTTCC--HHHHHHHHHHTSCTTT
T ss_pred HHHHHHH-cCChHHHHHHHHH----HHHHHHHHHhhC--------CCEEEEeCchhccchhH--HHHHHHHHHHHhhccc
Confidence 4567665 5899988777665 567889999999 59999999999876654 788888887763 2
Q ss_pred ---CceeeCC---CCChHHHHHHHHHHhhhc
Q 019144 319 ---GAVPIRP---KVEPAVGAALLAWNSFMN 343 (345)
Q Consensus 319 ---~~~i~~~---~~a~~~GAa~la~~~~~~ 343 (345)
.++|+.+ ++++++||++++++++..
T Consensus 273 ~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~ 303 (310)
T 3htv_A 273 PHQVVRFIAASSSDFNGAQGAAILAHQRFLP 303 (310)
T ss_dssp TTTTCEEEECCCCTTHHHHHHHHHHHHHHCC
T ss_pred ccCCcEEEEcCCCCcHHHHHHHHHHHHHhhc
Confidence 3566653 678999999999988754
No 15
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=100.00 E-value=2.8e-35 Score=288.61 Aligned_cols=273 Identities=12% Similarity=0.079 Sum_probs=209.4
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
..|+||+|+|+|+++++++|+ +|+++.+...++. ..+++++++.+.+.+++++++.+.+..+|.+|||
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~---------~G~il~~~~~~~~---~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 151 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDL---------SSKLVVEESQELA---LKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAI 151 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEET---------TCCEEEEEEEECC---SSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEE
T ss_pred ccEEEEEEEcCCEEEEEEEcC---------CCCEEEEEEecCC---CCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEE
Confidence 469999999999999999999 8999998876552 2467889999999999999988766678999999
Q ss_pred eecCCCChh-----------HH--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccceeeee
Q 019144 101 AVSGVNHPT-----------DQ--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGF 162 (345)
Q Consensus 101 g~pG~~~~~-----------~~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~g~gi 162 (345)
++||+++++ .| .++++.|+++|+ .||+|+||+|++++++. .+.++++++++|||+ |+|+
T Consensus 152 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi-G~gi 228 (406)
T 1z6r_A 152 TLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTG--VPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNV-GAGV 228 (406)
T ss_dssp EESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHS--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEE
T ss_pred EeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHC--CCEEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcE-EEEE
Confidence 999996542 22 478999999998 89999999999988863 245789999999997 7789
Q ss_pred cCCCCeEE-----eccCCCCcCCc-CcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhc----CC
Q 019144 163 TEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV----DP 232 (345)
Q Consensus 163 ~~dG~~~~-----~Gg~G~~~gd~-G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~ 232 (345)
+.||++++ +|||||+..++ |..|.|| ..+|++.+.+ ...|.+.+.. ..
T Consensus 229 v~~G~l~~G~~g~AGEiGh~~v~~~g~~c~cG-------------------~~gclE~~~S---~~al~~~~~~~~~~~~ 286 (406)
T 1z6r_A 229 ITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCG-------------------NHGCLETIAS---VDSILELAQLRLNQSM 286 (406)
T ss_dssp EETTEETTTTSSCCBCGGGSBSCTTSCBCTTS-------------------CBSBTHHHHS---HHHHHHHHHHHHTTCT
T ss_pred EECCEEeecCCCcCccCCceEecCCCCCCCCC-------------------CccchHHHcC---HHHHHHHHHHhhhccc
Confidence 99999975 78888887764 3333333 3334444443 4445443321 00
Q ss_pred -Ch-HHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHH
Q 019144 233 -SW-ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVV 310 (345)
Q Consensus 233 -~~-~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~ 310 (345)
.. .......+.|++++++||+.|.+++++++++|+..++++++.|| |+.|||+|++....+.+ .+.++
T Consensus 287 ~~~~~~~~~~~~~v~~~a~~gD~~a~~~l~~~~~~L~~~i~~l~~~ld--------P~~IvlgG~i~~~~~~l--~~~i~ 356 (406)
T 1z6r_A 287 SSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN--------PQKILIGSPLSKAADIL--FPVIS 356 (406)
T ss_dssp TCGGGSSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGHHHH--HHHHH
T ss_pred ccccCcccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEeCccchhhHHH--HHHHH
Confidence 00 00012357899999999999999999999999999999999999 59999999998775554 88899
Q ss_pred HHHHhh-C----CCceeeC---CCCChHHHHHHHHHHhh
Q 019144 311 KCILRD-Y----PGAVPIR---PKVEPAVGAALLAWNSF 341 (345)
Q Consensus 311 ~~l~~~-~----~~~~i~~---~~~a~~~GAa~la~~~~ 341 (345)
+.+.++ + ..++|.. .++++++||+++ ++.+
T Consensus 357 ~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~-~~~~ 394 (406)
T 1z6r_A 357 DSIRQQALPAYSQHISVESTQFSNQGTMAGAALV-KDAM 394 (406)
T ss_dssp HHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHH-HHHT
T ss_pred HHHHHhcccccCCCcEEEEeCCCChHHHHHHHHH-HHHH
Confidence 998877 3 2355554 367899999654 5554
No 16
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=100.00 E-value=6.8e-35 Score=279.73 Aligned_cols=270 Identities=17% Similarity=0.128 Sum_probs=203.7
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEe
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig 101 (345)
.|+||||+|+|+++++++|+ +|+++.+.+.+++ .+++++++.+.+.+++++++.+....+|.+|||+
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~ 96 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM---------KGEIVKKYTQFNP----KTYEERINLILQMCVEAAAEAVKLNCRILGVGIS 96 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECC----SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC---------CCcEEEEEEEcCC----CCHHHHHHHHHHHHHHHHHhcccccCceEEEEEe
Confidence 59999999999999999999 8999988776542 3678899999999999988765555679999999
Q ss_pred ecCCCChh------------HH--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccceeeee
Q 019144 102 VSGVNHPT------------DQ--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGF 162 (345)
Q Consensus 102 ~pG~~~~~------------~~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~g~gi 162 (345)
+||+++++ .| .++++.|+++|+ .||+|+||+|++++++. .+.++++++++|||+ |+|+
T Consensus 97 ~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGi-G~gi 173 (343)
T 2yhw_A 97 TGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLH--LPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGI-GGGI 173 (343)
T ss_dssp ESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHC--SCEEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSE-EEEE
T ss_pred cccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCE-EEEE
Confidence 99986432 12 367899999997 89999999999988874 245689999999996 7889
Q ss_pred cCCCCeEE-----eccCCCCcCCc-CcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhc----CC
Q 019144 163 TEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV----DP 232 (345)
Q Consensus 163 ~~dG~~~~-----~Gg~G~~~gd~-G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~ 232 (345)
+.||++++ +|||||+..++ |..|+||.+. |++.+.+ ...|.+.+.. +.
T Consensus 174 i~~G~l~~G~~g~aGEiGh~~~~~~g~~c~cG~~g-------------------clE~~~s---~~al~~~~~~~~~~~~ 231 (343)
T 2yhw_A 174 IHQHELIHGSSFCAAELGHLVVSLXGPDCSCGSHG-------------------CIEAYAS---GMALQREAKKLHDEDL 231 (343)
T ss_dssp EETTEECCCTTSCTTCGGGCBCCC--CBCTTSCBS-------------------BHHHHHS---HHHHHHHHHHHHHTTC
T ss_pred EECCEEecCCCCcccccCCEEEccCCCcCCCCCCC-------------------cHHHhcC---HHHHHHHHHHhhcccc
Confidence 99999986 78999988775 4455555432 2233321 2233222110 00
Q ss_pred ------C-hHHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccc
Q 019144 233 ------S-WARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDI 305 (345)
Q Consensus 233 ------~-~~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l 305 (345)
. ........+.|++++++||+.|++++++++++|+..++|++++|| |+.|||+|++. +. +
T Consensus 232 ~~~~~~~~~~~~~~~~~~v~~~a~~gd~~a~~il~~~~~~La~~i~~l~~~l~--------P~~IvlgG~i~---~~--~ 298 (343)
T 2yhw_A 232 LLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMN--------PSLVILSGVLA---SH--Y 298 (343)
T ss_dssp SCCTTCCC----CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTC--------CSEEEEESTTH---HH--H
T ss_pred cccccccccccccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCCcH---HH--H
Confidence 0 000112467899999999999999999999999999999999999 59999999986 33 3
Q ss_pred hHHHHHHHHhhC----CCceeeCC--CCChHHHHHHHHHHhhh
Q 019144 306 GREVVKCILRDY----PGAVPIRP--KVEPAVGAALLAWNSFM 342 (345)
Q Consensus 306 ~~~~~~~l~~~~----~~~~i~~~--~~a~~~GAa~la~~~~~ 342 (345)
.+.+++.++++. ..++|..+ .+++++||+.++++.+.
T Consensus 299 ~~~l~~~l~~~~~~~~~~~~i~~s~~~~~~~~GAa~l~~~~~~ 341 (343)
T 2yhw_A 299 IHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYTT 341 (343)
T ss_dssp HHHHHHHHHHHSCGGGTTCEEEECCCSCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcccccCCcEEEEccCCCchHHHHHHHHHHHhh
Confidence 788888887762 13455432 45689999999998764
No 17
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=2.5e-34 Score=269.05 Aligned_cols=258 Identities=17% Similarity=0.121 Sum_probs=198.8
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
|+||+|+|+|+++++++|+ +|+++.+.+.++.+. .+++++++.+.+.+++++.+ +.+||||+
T Consensus 2 ~~lgidiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~~-------~~~igi~~ 63 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGA---------DGQIRDRRELPTPAS--QTPEALRDALSALVSPLQAH-------AQRVAIAS 63 (289)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHTTTGGG-------CSEEEEEE
T ss_pred eEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCCCC--CCHHHHHHHHHHHHHHHHhh-------CCEEEEEe
Confidence 6899999999999999999 899999888766432 36888898888888776543 34799999
Q ss_pred cCCCChh-----------HH--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-C----CCCCeEEEEeCccceeeeecC
Q 019144 103 SGVNHPT-----------DQ--QRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGFTE 164 (345)
Q Consensus 103 pG~~~~~-----------~~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-~----g~~~~v~v~~GTG~~g~gi~~ 164 (345)
||+++++ .| .+|++.|+++|+ .||+++||+|+++++++ . +. +++++++|||+ |+|++.
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtGi-G~gii~ 139 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTN--LPTIAINDAQAAAWAEFQALDGDIT-DMVFITVSTGV-GGGVVS 139 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSSE-EEEEEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHC--CCEEEechHHHHHHHHHHhCCCCCc-eEEEEEeCccE-EEEEEE
Confidence 9986432 13 368999999998 89999999999988873 2 34 89999999996 778999
Q ss_pred CCCeEE-----eccCCCCcCCcCc-HHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHh
Q 019144 165 DGRDAR-----AAGAGPILGDWGS-GYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIA 238 (345)
Q Consensus 165 dG~~~~-----~Gg~G~~~gd~G~-a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 238 (345)
||++++ +|||||+..++++ .|+||+ .+|++.+.+ ...|.+.+... . ..
T Consensus 140 ~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~-------------------~gcle~~~s---~~~l~~~~~~~---~-~~ 193 (289)
T 2aa4_A 140 GCKLLTGPGGLAGHIGHTLADPHGPVCGCGR-------------------TGCVEAIAS---GRGIAAAAQGE---L-AG 193 (289)
T ss_dssp TTEEECCTTSCCCCGGGSBSCTTSCBCTTSC-------------------BSBHHHHHS---HHHHHHTCCGG---G-TT
T ss_pred CCEEeeCCCCCCccCCcEEECCCCCcCCCCC-------------------chhHHHHhC---HHHHHHHHHHh---c-cC
Confidence 999985 8999999887643 233332 233444443 44555443210 0 01
Q ss_pred cchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCC
Q 019144 239 ALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP 318 (345)
Q Consensus 239 ~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~ 318 (345)
...+.|++++++||+.|++++++++++|+..+.++++.|| |+.|||+|++. ..+. +.+.+++.++++.+
T Consensus 194 ~~~~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~--------p~~ivlgG~~~-~~~~--~~~~l~~~l~~~~~ 262 (289)
T 2aa4_A 194 ADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTD--------CQCVVVGGSVG-LAEG--YLALVETYLAQEPA 262 (289)
T ss_dssp CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEEHHHH-TSTT--HHHHHHHHHTTSCG
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEeCccc-ccHH--HHHHHHHHHHHhcC
Confidence 2457899999999999999999999999999999999999 58999999998 4444 48899999987631
Q ss_pred --CceeeC---CCCChHHHHHHHHHH
Q 019144 319 --GAVPIR---PKVEPAVGAALLAWN 339 (345)
Q Consensus 319 --~~~i~~---~~~a~~~GAa~la~~ 339 (345)
.++++. .++++++||++++++
T Consensus 263 ~~~~~i~~~~~~~~a~~~GAa~l~~~ 288 (289)
T 2aa4_A 263 AFHVDLLAAHYRHDAGLLGAALLAQG 288 (289)
T ss_dssp GGCCEEEECSCSSCHHHHHHHHHHHC
T ss_pred ccCCEEEECCCCCchHHHHHHHHHhc
Confidence 345543 356789999998864
No 18
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=5.9e-35 Score=278.23 Aligned_cols=273 Identities=16% Similarity=0.102 Sum_probs=207.8
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
++||||+|+|+++++++|+ +|+++.+.+.++.+ .+++++++.+.+.++++..+.+ .+.+||||+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~---------~g~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~----~i~~igi~~ 88 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFDS---------TRRLQWEKRVPTPH---TSYSAFLDAVCELVEEADQRFG----VKGSVGIGI 88 (327)
T ss_dssp EEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCC---SCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE
T ss_pred eEEEEEECCCEEEEEEEeC---------CCCEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence 7999999999999999999 89999988776543 2678899999999998877543 478899999
Q ss_pred cCCCChhH----------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-C----CCCCeEEEEeCccceeeeecCC
Q 019144 103 SGVNHPTD----------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGFTED 165 (345)
Q Consensus 103 pG~~~~~~----------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-~----g~~~~v~v~~GTG~~g~gi~~d 165 (345)
||+++++. + .+|++.|+++|+ .||+|+||+|++++++. . +.++++++++|||+ |+|++.|
T Consensus 89 pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~--~pv~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGi-G~giv~~ 165 (327)
T 2ap1_A 89 PGMPETEDGTLYAANVPAASGKPLRADLSARLD--RDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGV-GGGLVLN 165 (327)
T ss_dssp SSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHT--SCEEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSE-EEEEEET
T ss_pred eeeEECCCCEEEccCCCccCCCChHHHHHHHHC--CCEEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcE-EEEEEEC
Confidence 99976532 1 368899999998 89999999999988874 2 34678999999997 7889999
Q ss_pred CCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcc
Q 019144 166 GRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAAL 240 (345)
Q Consensus 166 G~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 240 (345)
|++++ +|||||+..++++..+.+. ...+..|.|+...|++.+++ ...|.+.+...... ...
T Consensus 166 G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~--------~~~g~~c~cG~~gcle~~~s---~~~l~~~~~~~~~~---~~~ 231 (327)
T 2ap1_A 166 GKPITGQSYITGEFGHMRLPVDALTLMGF--------DFPLRRCGCGQMGCIENYLS---GRGFAWLYQHYYDQ---SLQ 231 (327)
T ss_dssp TEEECCTTSCTTCGGGSBCCHHHHHHHCT--------TSCCCBCTTSCBSBTHHHHS---HHHHHHHHHHHHCC---CCC
T ss_pred CEEeecCCCcccccccEEEecCccccccc--------ccCCCcCCCCchhhHHHHhC---HHHHHHHHHHhcCC---CCC
Confidence 99986 6778887766543332111 01245566666667777764 55666554310000 123
Q ss_pred hHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCC--
Q 019144 241 VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP-- 318 (345)
Q Consensus 241 ~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~-- 318 (345)
.+.|++++++||+.|++++++++++|+..++++++.|| |+.|||+|++.... .+ +.++++.++++.+
T Consensus 232 ~~~i~~~a~~gd~~a~~il~~~~~~La~~i~~l~~~l~--------p~~IvlgG~i~~~~-~~--~~~l~~~l~~~~~~~ 300 (327)
T 2ap1_A 232 APEIIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVD--------PDLLVIGGGLSNFT-AI--TTQLAERLPRHLLPV 300 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGST-HH--HHSSGGGSGGGSCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeChhhcch-hH--HHHHHHHHHHhhccc
Confidence 57899999999999999999999999999999999999 58999999998765 34 3347777776632
Q ss_pred --CceeeC---CCCChHHHHHHHHHH
Q 019144 319 --GAVPIR---PKVEPAVGAALLAWN 339 (345)
Q Consensus 319 --~~~i~~---~~~a~~~GAa~la~~ 339 (345)
.++|+. .++++++||++++++
T Consensus 301 ~~~~~i~~s~~~~~a~~~GAa~lal~ 326 (327)
T 2ap1_A 301 ARAPRIERARHGDAGGMRGAAFLHLT 326 (327)
T ss_dssp CCCCEEEECSCTTTHHHHHHHHTTSC
T ss_pred cCCCEEEEcCCCCcHHHHHHHHHHhh
Confidence 355654 356789999998764
No 19
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=9.4e-34 Score=265.69 Aligned_cols=257 Identities=12% Similarity=0.074 Sum_probs=190.7
Q ss_pred cCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 019144 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (345)
Q Consensus 18 ~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~ 97 (345)
+.| ++||||+|+|+++++++|+ +|+++.+.+.+++ .+++++++.+.+.+++ .++.+
T Consensus 2 ~~m--~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~----~~~~~~~~~i~~~i~~---------~~i~g 57 (292)
T 2gup_A 2 NAM--TIATIDIGGTGIKFASLTP---------DGKILDKTSISTP----ENLEDLLAWLDQRLSE---------QDYSG 57 (292)
T ss_dssp --C--CEEEEEEETTEEEEEEECT---------TCCEEEEEEECCC----SSHHHHHHHHHHHHTT---------SCCSE
T ss_pred CCc--EEEEEEECCCEEEEEEECC---------CCCEEEEEEEeCC----CCHHHHHHHHHHHHHh---------CCCcE
Confidence 456 6899999999999999999 8999998876553 3577777776665544 36889
Q ss_pred eEEeecCCCChhH-----------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc---CCCCCeEEEEeCccceeee
Q 019144 98 VCLAVSGVNHPTD-----------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT---MGKLHGCVLIAGTGTIAYG 161 (345)
Q Consensus 98 Igig~pG~~~~~~-----------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~---~g~~~~v~v~~GTG~~g~g 161 (345)
||||+||+++++. | .++++.| ++|+ .||+++||+|++++++. .+.++++++++|||+ |+|
T Consensus 58 igi~~pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~--~pv~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGi-G~g 133 (292)
T 2gup_A 58 IAMSVPGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQ--LPVHLENDANCVGLSELLAHPELENAACVVIGTGI-GGA 133 (292)
T ss_dssp EEEEESSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGC--CCEEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSE-EEE
T ss_pred EEEEecCcccCCCCEEEecCCCCcccCCCHHHHH-HHcC--CCEEEechHHHHHHHHHHhcCCCCeEEEEEECCce-EEE
Confidence 9999999965431 2 3788999 9997 89999999999999875 356789999999997 788
Q ss_pred ecCCCCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHH
Q 019144 162 FTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWAR 236 (345)
Q Consensus 162 i~~dG~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (345)
++.||++++ +|||||+..++++ | -.+|++.+.+ ...|.+.+........
T Consensus 134 iv~~G~l~~G~~g~aGEiGh~~~~~~~----------------------~-~~gcle~~~s---~~~l~~~~~~~~~~~~ 187 (292)
T 2gup_A 134 MIINGRLHRGRHGLGGEFGYMTTLAPA----------------------E-KLNNWSQLAS---TGNMVRYVIEKSGHTD 187 (292)
T ss_dssp EEETTEEECCTTSCTTCGGGCBSSCCS----------------------S-SCCBHHHHHS---HHHHHHHHHHHHSSCC
T ss_pred EEECCEEEecCCCCCccceeEEeccCC----------------------C-CCCcHHHhcC---HHHHHHHHHHhhCCCC
Confidence 999999986 4556665554311 0 0123444443 4555554431000000
Q ss_pred HhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhh
Q 019144 237 IAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRD 316 (345)
Q Consensus 237 ~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~ 316 (345)
...+.|++++++||+.|++++++++++|+..++++++.|| |+.||++|++.. .+. +.+.+++.++++
T Consensus 188 --~~~~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~--------p~~IvlgG~i~~-~~~--~~~~l~~~l~~~ 254 (292)
T 2gup_A 188 --WDGRKIYQEAAAGNILCQEAIERMNRNLAQGLLNIQYLID--------PGVISLGGSISQ-NPD--FIQGVKKAVEDF 254 (292)
T ss_dssp --CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGG-CHH--HHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCcccc-chH--HHHHHHHHHHHh
Confidence 1356889999999999999999999999999999999999 599999999964 444 478888888765
Q ss_pred C-------CCceeeC---CCCChHHHHHHHHHHhh
Q 019144 317 Y-------PGAVPIR---PKVEPAVGAALLAWNSF 341 (345)
Q Consensus 317 ~-------~~~~i~~---~~~a~~~GAa~la~~~~ 341 (345)
. ..++|.. .++++++||+.+++++.
T Consensus 255 ~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~~~ 289 (292)
T 2gup_A 255 VDAYEEYTVAPVIQACTYHADANLYGALVNWLQEE 289 (292)
T ss_dssp HHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHHHT
T ss_pred hcccccccCCCeEEEcccCChhhHHHHHHHHHHhc
Confidence 2 2244543 35678999999998764
No 20
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.98 E-value=1.3e-31 Score=253.13 Aligned_cols=249 Identities=14% Similarity=0.111 Sum_probs=184.6
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
|++|+|+|+|+++++++|+ +|+++.+.+.++. +++++++.+.+.++ + .++.+|||++
T Consensus 4 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~t~-----~~~~~l~~i~~~~~----~-----~~i~gigi~~ 60 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGRE---------DGTIIDRIEFPTX-----MPDETIEXVIQYFS----Q-----FSLQAIGIGS 60 (302)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECC-----CHHHHHHHHHHHHT----T-----SCCSEEEEEE
T ss_pred EEEEEEECcceeEEEEEEC---------CCcEEEEEEecCC-----ChHHHHHHHHHHhc----c-----CCceEEEEEe
Confidence 7999999999999999999 8999998876543 46667666655443 1 2689999999
Q ss_pred cCCCChhH---------------H--HHHHHHHHhhCCCCceEEEeCcHHHHHhccc-----CCCCCeEEEEeCccceee
Q 019144 103 SGVNHPTD---------------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAY 160 (345)
Q Consensus 103 pG~~~~~~---------------~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-----~g~~~~v~v~~GTG~~g~ 160 (345)
||+++++. | .+|++.|+++|+ .||+++||+|+++++|+ .+.++++++++|||+ |+
T Consensus 61 pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtGi-G~ 137 (302)
T 3epq_A 61 FGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMX--IPVGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTGI-GA 137 (302)
T ss_dssp CSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EE
T ss_pred ceeeccccccccccEEecCCCCCccCCChHHHHHHHhC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCce-EE
Confidence 99965421 2 478999999998 89999999999998873 346789999999997 77
Q ss_pred eecCCCCeEE---eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhH-HHHHHHcCCCChhhHHHHhhcCCChHH
Q 019144 161 GFTEDGRDAR---AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLT-SNILSTLELSSPDELIGWTYVDPSWAR 236 (345)
Q Consensus 161 gi~~dG~~~~---~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 236 (345)
|++.||++++ +||+|||..+.... ++..|.|++. +|++.+.+ ...|.+.+.. ...+
T Consensus 138 gii~~G~l~~G~~agEiGh~~v~~~~~---------------~~~~~~C~~~~gclE~~~S---~~al~~~~~~--~~~~ 197 (302)
T 3epq_A 138 GAIVEGRLLQGLSHPEMGHIYIRRHPD---------------DVYQGXCPYHGDCFEGLAS---GPAIEARWGX--KAAD 197 (302)
T ss_dssp EEEETTEECCSSSCCCGGGCCCCCCTT---------------CCCCCSBTTTBSSHHHHHS---HHHHHHHHSS--CGGG
T ss_pred EEEECCEEcccCCCCccceEEEecCCC---------------CCcCcccCCCCcchhhhCC---HHHHHHHhhc--cccc
Confidence 8999999986 67888876653210 1112223222 46666654 5666665432 1111
Q ss_pred HhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhh
Q 019144 237 IAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRD 316 (345)
Q Consensus 237 ~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~ 316 (345)
+ +.+.+++++++++||.+++|++++|| |+.|||+|++.... .+ ++++++.+.++
T Consensus 198 -------~--------~~~~~~~~~~~~~La~~i~nl~~~ld--------Pe~IviGGgi~~~~-~l--~~~i~~~l~~~ 251 (302)
T 3epq_A 198 -------L--------SDIAQVWELEGYYIAQALAQYILILA--------PXXIILGGGVMQQX-QV--FSYIYQYVPKI 251 (302)
T ss_dssp -------G--------TTCHHHHHHHHHHHHHHHHHHHHHTC--------CSCEEEESSGGGCT-HH--HHHHHHHHHHH
T ss_pred -------c--------cchHHHHHHHHHHHHHHHHHHHHHHC--------chhhhcCchhhhhH-HH--HHHHHHHHHHH
Confidence 1 12367899999999999999999999 59999999998764 34 78888888775
Q ss_pred C------C------CceeeCC---CCChHHHHHHHHHHhhhc
Q 019144 317 Y------P------GAVPIRP---KVEPAVGAALLAWNSFMN 343 (345)
Q Consensus 317 ~------~------~~~i~~~---~~a~~~GAa~la~~~~~~ 343 (345)
. | .++|+.+ ++++++||++++++.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~~~~~ 293 (302)
T 3epq_A 252 MNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQALQA 293 (302)
T ss_dssp HTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHHHHHH
T ss_pred HhhhccCcccccccCceEEECCcCChHHHHHHHHHHHHHHHH
Confidence 2 1 1235543 578999999999988754
No 21
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.97 E-value=5.2e-30 Score=244.93 Aligned_cols=276 Identities=14% Similarity=0.023 Sum_probs=185.8
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
+.|+||+|+|+|+++++++|+. +++++.+.+.++... + .+.+.+++++++.+ .++.+|||
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~--------~g~i~~~~~~~~~~~-----~----~~~~~i~~~~~~~~---~~i~gigi 72 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIA--------SGEISQAKTYSGLDY-----P----SLEAVIRVYLEEHK---VEVKDGCI 72 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETT--------TCCEEEEEEEEGGGC-----S----CHHHHHHHHHHHSC---CCCCEEEE
T ss_pred CCEEEEEEechhheEEEEEECC--------CCcEEEEEEecCCCc-----C----CHHHHHHHHHHhcC---CCccEEEE
Confidence 3699999999999999999961 588887766544321 1 23344455555554 25889999
Q ss_pred eecCCCChhH-------H-HHHHHHHHhhCCCCce-EEEeCcHHHHHhcccC---------------CCCCeEEEEeCcc
Q 019144 101 AVSGVNHPTD-------Q-QRILNWLRDIFPGNVR-LYVHNDALAALASGTM---------------GKLHGCVLIAGTG 156 (345)
Q Consensus 101 g~pG~~~~~~-------~-~~l~~~L~~~~~~~~p-V~v~NDa~~a~~~~~~---------------g~~~~v~v~~GTG 156 (345)
|+||++++.. | .+ .+.|+++|+ .| |+|+||+|++++++.+ +.++.++|++|||
T Consensus 73 ~~pG~vd~~~~~~~nl~w~~~-~~~l~~~~~--~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTG 149 (332)
T 1sz2_A 73 AIACPITGDWVAMTNHTWAFS-IAEMKKNLG--FSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTG 149 (332)
T ss_dssp EESSCCCSSEECCSSSCCCEE-HHHHHHHHT--CSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSS
T ss_pred EEeCceeCCEEeeeCCCCcCC-HHHHHHHhC--CCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCcc
Confidence 9999986431 1 24 578999998 77 9999999999998742 3467899999999
Q ss_pred ceeeeecCCCC---eEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhc---
Q 019144 157 TIAYGFTEDGR---DARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV--- 230 (345)
Q Consensus 157 ~~g~gi~~dG~---~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 230 (345)
+ |+|++.||+ -..+||+||+..++.+.-++.. + ......+|+ .|++.+. +...|.+.+..
T Consensus 150 i-G~giv~~g~~G~~g~agE~GH~~v~~~~~~~~~l--~-~~~c~~~g~-------gclE~~~---S~~~l~~~~~~~~~ 215 (332)
T 1sz2_A 150 L-GVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAII--L-EILRAEIGH-------VSAERVL---SGPGLVNLYRAIVK 215 (332)
T ss_dssp E-EEEEEEEETTEEEEEECCGGGSBCCCCSHHHHHH--H-HHHHHHSSS-------CBGGGTS---SHHHHHHHHHHHHH
T ss_pred c-eEEEEecCCCCeeeCCCCccccCcCCCChHHHHH--H-HHHHhccCC-------cchhhhc---cHHHHHHHHHHHhh
Confidence 7 677888865 2349999999776654322110 0 000011221 2233333 34445443221
Q ss_pred CCChHHHhcchHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcc-EEEEcCcccCcccccch-H
Q 019144 231 DPSWARIAALVPVVVSCAEAG-DEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFP-LVMVGGVLEANRRWDIG-R 307 (345)
Q Consensus 231 ~~~~~~~~~~~~~v~~~a~~g-D~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~-IVlgGgl~~~~~~~~l~-~ 307 (345)
...........+.|++++++| |+.|++++++++++||..++|++++|| |+. |||+||+.....++ +. +
T Consensus 216 ~~~~~~~~~~~~~i~~~a~~G~D~~A~~~~~~~~~~Lg~~i~~l~~~l~--------P~~gvvigGGi~~~~~~~-l~~~ 286 (332)
T 1sz2_A 216 ADNRLPENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLG--------TFGGVFIAGGIVPRFLEF-FKAS 286 (332)
T ss_dssp HTTCCCCCCCHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHT--------CTTEEEEECSSSGGGHHH-HHHS
T ss_pred ccCCCccCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEEChhhhhHHHH-hccH
Confidence 000000012357899999999 999999999999999999999999999 588 99999998764444 34 3
Q ss_pred HHHHHHHhh--C----C--CceeeCCCCChHHHHHHHHHHhhh
Q 019144 308 EVVKCILRD--Y----P--GAVPIRPKVEPAVGAALLAWNSFM 342 (345)
Q Consensus 308 ~~~~~l~~~--~----~--~~~i~~~~~a~~~GAa~la~~~~~ 342 (345)
.+++.+.++ + . .+.+...++++++||++++++.+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~GAa~l~~~~~~ 329 (332)
T 1sz2_A 287 GFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLG 329 (332)
T ss_dssp SHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCchhhHHhCceEEEEECCchhHHHHHHHHHHhhh
Confidence 577777542 1 1 233334567899999999987653
No 22
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.97 E-value=4.1e-31 Score=256.46 Aligned_cols=274 Identities=15% Similarity=0.043 Sum_probs=194.6
Q ss_pred cEEEEEecCccceeeEEEcC--ccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 019144 22 EVILGLDGGTTSTVCICMPV--ISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~--~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Ig 99 (345)
.|+||+|+|+|+++++++|+ ++ +|+++.+.+..+. .+++++++.+.+.++++.... +.++.+||
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~-------~g~il~~~~~~~~----~~~~~~~~~i~~~i~~~~~~~---~~~i~gig 94 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKND-------SVHACVTRYSMKR----KDITEIIEFFNEIIELMPASV---MKRVKAGV 94 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGG-------CEEEEEEEEECTT----CBGGGHHHHHHHHHHHSCHHH---HTTEEEEE
T ss_pred CeEEEEEEccccEEEEEEecccCC-------CccEEEEeeecCC----CCHHHHHHHHHHHHHHHhhcc---cccccEEE
Confidence 49999999999999999997 10 3788887762222 256778888888887765432 24688999
Q ss_pred EeecCCCChhH---------H-HHHHHHHHhhCCCCc-eEEEeCcHHHHHhc---------------cc-C---------
Q 019144 100 LAVSGVNHPTD---------Q-QRILNWLRDIFPGNV-RLYVHNDALAALAS---------------GT-M--------- 143 (345)
Q Consensus 100 ig~pG~~~~~~---------~-~~l~~~L~~~~~~~~-pV~v~NDa~~a~~~---------------~~-~--------- 143 (345)
||+||++++.. + .++++.++++|+ . ||+|+||+|+++++ +. .
T Consensus 95 i~~pG~vd~g~v~~~~~~~~~~~~l~~~l~~~~~--~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~ 172 (373)
T 2q2r_A 95 INVPGPVTGGAVGGPFNNLKGIARLSDYPKALFP--PGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQ 172 (373)
T ss_dssp EEESSCEETTTEECCCSSSBSCEEGGGSCTTTSC--TTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCS
T ss_pred EEeeccccCCEEeccCCCCCCcCCHHHHHHHhcC--CCCEEEEccHhHHhccccccChhhhccccchhhccccccccccc
Confidence 99999965311 2 267777888887 6 99999999999888 43 2
Q ss_pred ---C----CCCeEEEEeCccceeeeecCCCCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHH
Q 019144 144 ---G----KLHGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSN 211 (345)
Q Consensus 144 ---g----~~~~v~v~~GTG~~g~gi~~dG~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~ 211 (345)
+ .++++++++|||+ |+|++.||++++ +|||||+..+.++.|+||+..+.. . + . +.|
T Consensus 173 ~~~g~~~~~~~~~~v~~GTGi-G~gii~~g~l~~G~~~~aGE~Gh~~~~~~~~c~cg~~l~~~----~-~-~-----~g~ 240 (373)
T 2q2r_A 173 EPAGSVIGRGRCLVLAPGTGL-GSSLIYYNPPMNQHIVVPLELGSQTLPMRKDIDYIQTLHAE----L-K-L-----FPN 240 (373)
T ss_dssp SCTTSSCCSSCEEEEEESSSE-EEEEEEECC---CEEEEEECGGGSBCCCSSCHHHHHHHHHH----H-T-S-----CCB
T ss_pred CCCcCcCCCCCEEEEEeCCce-eEEEEecCcccCCCcccccccceeecCCCCCcchhHHHHHH----h-h-c-----ccc
Confidence 3 3678999999997 778989988764 999999988765559999865431 1 1 0 122
Q ss_pred HHHHcCCCChhhHHHHhhc---CCChHHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCc
Q 019144 212 ILSTLELSSPDELIGWTYV---DPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSF 288 (345)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~ 288 (345)
++.+. +...|.+.+.. ... . ....+.|++++++||+.|++++++++++|+..++|+++.|| |+
T Consensus 241 lE~~~---S~~~l~~~~~~~~~~~~-~--~~~~~~i~~~a~~gD~~a~~~l~~~~~~L~~~i~~l~~~l~--------p~ 306 (373)
T 2q2r_A 241 YENMV---SGAGLEFHYRQVVRGSR-P--PCSAGEIAKLASEGDANACKAMKKYHEYLMRVGSEASMALL--------PL 306 (373)
T ss_dssp HHHHS---SHHHHHHHHHHHHTTSS-C--CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CS
T ss_pred HhHhc---CHHHHHHHHHHHhcCCC-C--CCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CC
Confidence 34443 24455443211 100 0 12357899999999999999999999999999999999999 48
Q ss_pred cEEEEcCcccCcccccchH--HHHHHHHhh-CC----------CceeeC---CCCChHHHHHHHHHH
Q 019144 289 PLVMVGGVLEANRRWDIGR--EVVKCILRD-YP----------GAVPIR---PKVEPAVGAALLAWN 339 (345)
Q Consensus 289 ~IVlgGgl~~~~~~~~l~~--~~~~~l~~~-~~----------~~~i~~---~~~a~~~GAa~la~~ 339 (345)
.|||+||.+...+.+ ++ .+++.+++. .+ .++|.. .++++++||+.++++
T Consensus 307 ~IvlgGG~~~~~~~~--~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~~ 371 (373)
T 2q2r_A 307 TIVLVGDNIVNNAFF--YRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGLD 371 (373)
T ss_dssp EEEECSHHHHHTHHH--HHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHHH
T ss_pred EEEEeCChHhCchhh--hcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHHh
Confidence 899988844333554 77 777777654 11 233332 357899999999876
No 23
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.97 E-value=7.1e-31 Score=254.03 Aligned_cols=237 Identities=17% Similarity=0.134 Sum_probs=177.2
Q ss_pred cCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEE-ecCCCCccccCHHHHHHHHHH---HHHHHHHHcCCCcc
Q 019144 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAGCSNHNSVGEDAARETIEK---VMADALLKSGSNRS 93 (345)
Q Consensus 18 ~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~~l~~---~i~~~~~~~~~~~~ 93 (345)
++...|+||+|+|+|+++++++| + |+++.+. +.++.. .+++++++.+.+ .++++++ .
T Consensus 5 n~d~~~~lgiDIGgt~i~~~l~d-~---------G~il~~~~~~~~~~---~~~~~~l~~i~~~~~~i~~~~~------~ 65 (366)
T 3mcp_A 5 TNDNRIVMTLDAGGTNFVFSAIQ-G---------GKEIADPVVLPACA---DCLDKCLGNLVEGFKAIQAGLP------E 65 (366)
T ss_dssp TTCCCEEEEEECSSSEEEEEEEE-T---------TEECSCCEEEECCT---TCHHHHHHHHHHHHHHHHTTCS------S
T ss_pred CCCCCEEEEEEECcceEEEEEEE-C---------CEEEEEEEEEECCC---CCHHHHHHHHHHHHHHHHHHhh------c
Confidence 34456999999999999999999 4 6777766 554432 278889988888 5555432 4
Q ss_pred ccceeEEeecCCCChh-----------HHH---HHHHHHHhhCCCCceEEEeCcHHHHHhccc-CC--------------
Q 019144 94 AVRAVCLAVSGVNHPT-----------DQQ---RILNWLRDIFPGNVRLYVHNDALAALASGT-MG-------------- 144 (345)
Q Consensus 94 ~i~~Igig~pG~~~~~-----------~~~---~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-~g-------------- 144 (345)
++.+|||++||+++++ .|. +|++.|+++|+ .||+++||+|++++++. .+
T Consensus 66 ~i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g--~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~ 143 (366)
T 3mcp_A 66 APVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFG--IPVFINNDGSLFAYGEALTGVLPEINRRLREAGS 143 (366)
T ss_dssp CCCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHC--SCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTC
T ss_pred CCeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHC--CCEEEechhhHHHHHHHHhCCCcccccccccccc
Confidence 6899999999996432 233 78999999998 89999999999988763 23
Q ss_pred ---CCCeEEEEeCccceeeeecCCCCeEE-----eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHc
Q 019144 145 ---KLHGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTL 216 (345)
Q Consensus 145 ---~~~~v~v~~GTG~~g~gi~~dG~~~~-----~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (345)
.++.+++.+|||+ |+|++.||++++ +||+||+. + .|| ...|++.+.
T Consensus 144 ~~~~~~~v~l~lGtGI-G~givi~G~l~~G~~g~AGEiGH~~-~-----~CG-------------------~~GclE~~~ 197 (366)
T 3mcp_A 144 TKRYKNLLGVTLGTGF-GAGVVIDGELLRGDNAAGGYVWCLR-N-----KKY-------------------PEYIVEESV 197 (366)
T ss_dssp CCCCCEEEEEEESSSE-EEEEEETTEECCCTTSCTTCCTTSB-C-----SSC-------------------TTSBGGGTS
T ss_pred cCCCCcEEEEEECCcc-eEEEEECCEEecCCCCCCceeeccc-C-----CCC-------------------CCcceeeee
Confidence 4678999999997 778999999986 55666655 2 111 122334433
Q ss_pred CCCChhhHHHHhhcCCChHHHhcchHHHHHHHH---cCC-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEE
Q 019144 217 ELSSPDELIGWTYVDPSWARIAALVPVVVSCAE---AGD-EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVM 292 (345)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~a~---~gD-~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVl 292 (345)
+...|.+.+....... -....+.|+++++ +|| +.|++++++++++||.+++|++++|| | .|||
T Consensus 198 ---S~~al~~~~~~~~~~~-~~~~~~~i~~~a~~~~~gD~~~a~~~l~~~~~~Lg~~i~nl~~~ld--------P-~Ivi 264 (366)
T 3mcp_A 198 ---SIRAVMRVYAERSGDA-GARTPKEIFEIAEGIRPGNREAAIAAFEELGEMAGDALASAITLID--------G-LIVI 264 (366)
T ss_dssp ---SHHHHHHHHHHHSSCC-SCCCHHHHHHHHHTSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHC--------S-EEEE
T ss_pred ---cHHHHHHHHHHhhCCC-CCCCHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHC--------C-EEEE
Confidence 3455555443100000 0112467899999 999 99999999999999999999999999 8 9999
Q ss_pred EcCcccCcccccchHHHHHHHHhh
Q 019144 293 VGGVLEANRRWDIGREVVKCILRD 316 (345)
Q Consensus 293 gGgl~~~~~~~~l~~~~~~~l~~~ 316 (345)
+|++....+.+ ++.+++.++++
T Consensus 265 GGgi~~~~~~~--~~~l~~~l~~~ 286 (366)
T 3mcp_A 265 GGGLSGASKYI--LPVLLKEMNAQ 286 (366)
T ss_dssp ESGGGGGHHHH--HHHHHHHHHHH
T ss_pred EChhhhchHHH--HHHHHHHHHHh
Confidence 99999876654 88899988776
No 24
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.96 E-value=4.9e-29 Score=242.73 Aligned_cols=270 Identities=16% Similarity=0.118 Sum_probs=195.1
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHH---HHHHHHHHHHcCCCcccccee
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETI---EKVMADALLKSGSNRSAVRAV 98 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l---~~~i~~~~~~~~~~~~~i~~I 98 (345)
.++||||+|+|+++++++|. + +++.+...++......+++++++.+ .+.+.+++++.+....+|.+|
T Consensus 2 ~~vlgidiGgt~ik~al~d~---------~-~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI 71 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFED---------E-RMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF 71 (381)
T ss_dssp CEEEEEEECSSEEEEEEEET---------T-EEEEEEEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE
T ss_pred CeEEEEECCccceeEEEEec---------c-hheeeeecccCcccccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE
Confidence 38999999999999999998 6 8888877654321000223345555 778888888777766789999
Q ss_pred EEeecCCCChhH--------------------------HHHHHHHHHhhCCCCceEEEeCcHH---------HHHh----
Q 019144 99 CLAVSGVNHPTD--------------------------QQRILNWLRDIFPGNVRLYVHNDAL---------AALA---- 139 (345)
Q Consensus 99 gig~pG~~~~~~--------------------------~~~l~~~L~~~~~~~~pV~v~NDa~---------~a~~---- 139 (345)
+++||++++.. ..++++.|+++|+ .||+|+||+| ++++
T Consensus 72 -i~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~--~Pv~v~NDan~~~~~~~a~aaalp~~~ 148 (381)
T 1saz_A 72 -VSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETG--VPAYVVDPVVVDEMEDVARVSGHPNYQ 148 (381)
T ss_dssp -EEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHC--CCEEEESCTTBCCCCGGGTBCSSTTCB
T ss_pred -EecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcC--CCEEEeCCCccccCcHHHHHcCCcchh
Confidence 99999865321 2478888999997 8999999999 7766
Q ss_pred -------------cc-c-----CCCC--CeEEEEeCccceeeeecCCCCeEE-----eccCCCCcCCcCcHHHHHH--HH
Q 019144 140 -------------SG-T-----MGKL--HGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAA--QA 191 (345)
Q Consensus 140 -------------~~-~-----~g~~--~~v~v~~GTG~~g~gi~~dG~~~~-----~Gg~G~~~gd~G~a~~iG~--~~ 191 (345)
++ . .+.+ +.+++.+|||+ |++++.||++++ +|+ ||+..+..+.|.||. ..
T Consensus 149 r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGi-G~g~i~~G~~~~G~~g~agE-Gh~~~~~~g~c~cg~l~~g 226 (381)
T 1saz_A 149 RKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGI-SIAAHRKGRVIDVNNALDGD-GPFTPERSGTLPLTQLVDL 226 (381)
T ss_dssp CCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSE-EEEEEETTEEEEECCGGGTC-SSCCSSCCCSCCHHHHHHH
T ss_pred hhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCc-EEEEEECCEEEEecCCCCCC-cceeeccCCCCCCcHHHHH
Confidence 65 2 2334 88999999998 677889999986 567 888876433366665 32
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHH--HhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 019144 192 LTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWAR--IAALVPVVVSCAEAGDEVANKILQDSVEELALS 269 (345)
Q Consensus 192 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~ 269 (345)
| .+... +...|.+++........ .....+.|++++++||+.|++++++++++|+..
T Consensus 227 c------~e~~~----------------S~~~l~~~~~~~~g~~~~~~~~~~~~i~~~a~~gd~~a~~~l~~~~~~la~~ 284 (381)
T 1saz_A 227 C------FSGKF----------------TYEEMKKRIVGNGGLVAYLGTSDAREVVRRIKQGDEWAKRVYRAMAYQIAKW 284 (381)
T ss_dssp H------TSSCC----------------CTTGGGSTTTTSCTHHHHHSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred H------HHhCC----------------CHHHHHHHHHhccCccccccCCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 2 12111 12333332221110000 012457889999999999999999999999999
Q ss_pred HHHHHHHh--ccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCC---CChHHHHHHHHHH
Q 019144 270 VKAVVQRL--SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPK---VEPAVGAALLAWN 339 (345)
Q Consensus 270 l~~lv~~l--d~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~---~a~~~GAa~la~~ 339 (345)
++++++.| | |+.|||+||+....+. +.+.+++.+....| +.++.+. +++++||+.++.+
T Consensus 285 i~~l~~~l~~~--------p~~IvlgGgi~~~~~~--l~~~i~~~l~~~~~-~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 285 IGKMAAVLKGE--------VDFIVLTGGLAHEKEF--LVPWITKRVSFIAP-VLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp HHHHHHHTTTC--------CSEEEEEEGGGGCTTT--HHHHHHHHHTTTSC-EEEEEBCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCC--------CCEEEEeCcCccChHH--HHHHHHHHHHhhcC-eEEEecCcchhHHHHHHHHHHcC
Confidence 99999999 8 5999999999987543 48889999987643 4555432 4789999998764
No 25
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.95 E-value=3.7e-27 Score=218.48 Aligned_cols=229 Identities=17% Similarity=0.090 Sum_probs=167.0
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCC-CCeeEE-EecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDP-LPVLAR-AAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~-g~i~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Ig 99 (345)
.|++|+|+|+|+++++++|+ + ++++.+ ...++... .+++++++.+.+.+++++++... ...+.+||
T Consensus 12 ~~~lgidiggt~i~~~l~dl---------~~g~i~~~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~ig 79 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDL---------KKGKLLGERFRVPTPQP--ATPESVAEAVALVVAELSARPEA-PAAGSPVG 79 (267)
T ss_dssp CCEEEEEECSSEEEEEEEET---------TTTEEEEEEEEEECCSS--CCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEE
T ss_pred CEEEEEEECCCEEEEEEEEC---------CCCeEEEEEEecCCCcc--CCHHHHHHHHHHHHHHHHHhccc-cCccceEE
Confidence 38999999999999999998 6 787743 34333221 46888999999999998765432 22456899
Q ss_pred EeecCCCC-------hh---HH--HHHHHHHHhhCCCCceEEEeCcHHHHHhcccC-----CCC-CeEEEEeCccceeee
Q 019144 100 LAVSGVNH-------PT---DQ--QRILNWLRDIFPGNVRLYVHNDALAALASGTM-----GKL-HGCVLIAGTGTIAYG 161 (345)
Q Consensus 100 ig~pG~~~-------~~---~~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~-----g~~-~~v~v~~GTG~~g~g 161 (345)
||+||+++ +. .| .++++.|+++|+ .||+++||+|++++++++ +.+ +.+++++|||+ |+|
T Consensus 80 i~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtGI-G~g 156 (267)
T 1woq_A 80 VTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLG--RPVEVINDADAAGLAEARYGAGAGVKGTVLVITLGTGI-GSA 156 (267)
T ss_dssp EEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHT--SCEEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSSE-EEE
T ss_pred EEccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHC--CCEEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcce-EEE
Confidence 99999853 11 23 478999999998 899999999999988741 234 36789999996 788
Q ss_pred ecCCCCeEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcch
Q 019144 162 FTEDGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALV 241 (345)
Q Consensus 162 i~~dG~~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (345)
++.||++++.||+||+..+.. +++.+.+ ...+.+
T Consensus 157 iv~~G~l~~GgEiGh~~v~~~----------------------------~lE~~~S---~~~l~~--------------- 190 (267)
T 1woq_A 157 FIFDGKLVPNAELGHLEIDGH----------------------------DAETKAS---AVARER--------------- 190 (267)
T ss_dssp EEETTEEETTCCGGGCEETTE----------------------------EHHHHHS---HHHHHH---------------
T ss_pred EEECCEEccCceeeeEEecCc----------------------------cHHHHhC---HHHHhh---------------
Confidence 999999999889999865421 0233322 111110
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCce
Q 019144 242 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAV 321 (345)
Q Consensus 242 ~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~ 321 (345)
. ...+++++++|+..++|++++|| |+.|||+|++....+.+ .+.++ ..++
T Consensus 191 --------~-----~~~~~~~~~~l~~~l~~l~~~ld--------P~~IvlgG~i~~~~~~~--~~~~~-------~~~~ 240 (267)
T 1woq_A 191 --------D-----GLSWDEYSVLLQRYFSHVEFLFS--------PELFIVGGGISKRADEY--LPNLR-------LRTP 240 (267)
T ss_dssp --------T-----TCCHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGGGGT--GGGCC-------CSSC
T ss_pred --------c-----chhHHHHHHHHHHHHHHHHHHcC--------CCEEEEeChhhcccHHH--HHhhc-------cCce
Confidence 0 01367889999999999999999 59999999999876554 55543 1233
Q ss_pred eeC---CCCChHHHHHHHHHHhh
Q 019144 322 PIR---PKVEPAVGAALLAWNSF 341 (345)
Q Consensus 322 i~~---~~~a~~~GAa~la~~~~ 341 (345)
|.. .++++++||+.+++++-
T Consensus 241 i~~s~l~~~a~~~GAa~l~~~~~ 263 (267)
T 1woq_A 241 IVPAVLRNEAGIVGAAIEIALQH 263 (267)
T ss_dssp EEECSCSTTHHHHHHHHHHHHHC
T ss_pred EEECCcCCcHHHHHHHHHHHhcc
Confidence 443 35779999999987653
No 26
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.92 E-value=5.7e-26 Score=205.68 Aligned_cols=192 Identities=12% Similarity=0.024 Sum_probs=137.5
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEe
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig 101 (345)
.+++|+|+|+|+++ ++|. ++++.. +.++.. ..+++++++.+.+.+++ . ++.+||||
T Consensus 6 ~~~lgiDIGGT~i~--~~d~---------~g~~~~--~~~t~~--~~~~~~~~~~i~~~i~~----~-----~i~gigi~ 61 (226)
T 3lm2_A 6 QTVLAIDIGGSHVK--IGLS---------TDGEER--KVESGK--TMTGPEMVAAVTAMAKD----M-----TYDVIAMG 61 (226)
T ss_dssp CCEEEEEECSSEEE--EEET---------TTCCEE--EEECCT--TCCHHHHHHHHHHHTTT----C-----CCSEEEEE
T ss_pred CEEEEEEECCCEEE--EEEC---------CCCEEE--EEECCC--CCCHHHHHHHHHHHHHh----C-----CCCEEEEE
Confidence 48999999999999 5787 777633 333322 14677777776665443 2 58899999
Q ss_pred ecCCCChhH-----------HHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCCCeEEEEeCccceeeeecCCCCeEE
Q 019144 102 VSGVNHPTD-----------QQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (345)
Q Consensus 102 ~pG~~~~~~-----------~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~~~v~v~~GTG~~g~gi~~dG~~~~ 170 (345)
+||+++++. |.. -.|+++|+ .||+++||+|++++++.+. ++.+++++|||+ |+|++.||++++
T Consensus 62 ~pG~Vd~~~~~~~~~nl~~~w~~--~~l~~~~~--~pv~v~NDanaaalge~~~-~~~~~l~~GtGi-G~gii~~G~l~~ 135 (226)
T 3lm2_A 62 YPGPVVHNKPLREPVNLGEGWVG--YDYEGAFG--RPVRIVNDALMQAIGSYNG-GRMLFLGLGTGL-GAAMIVENVAQP 135 (226)
T ss_dssp ESSCEETTEECSCCTTSCSCCTT--CCHHHHHT--SCEEEEEHHHHHHHHHCCS-SEEEEEEESSSE-EEEEEETTEEEE
T ss_pred EEeEEECCeEEEECCcCCccccC--CchHHhcC--CeEEEEEHHHHHHHHHhhc-CcEEEEEeCCce-EEEEEECCEEee
Confidence 999965321 211 12456787 8999999999999988654 589999999997 778999999998
Q ss_pred eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhcchHHHHHHHHc
Q 019144 171 AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEA 250 (345)
Q Consensus 171 ~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~a~~ 250 (345)
||+||+..+.+ +|++.+.+ ...|.+.
T Consensus 136 -GEiGH~~v~~~---------------------------gclE~~~s---~~al~~~----------------------- 161 (226)
T 3lm2_A 136 -MEIAHLPYRKG---------------------------KTYEHYVS---EAYREKK----------------------- 161 (226)
T ss_dssp -ECCTTSEEETT---------------------------EEHHHHTC---HHHHHHH-----------------------
T ss_pred -eeeeeEEecCC---------------------------CcHHHHhC---HHHHHHH-----------------------
Confidence 99999876432 12344432 2222211
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHH
Q 019144 251 GDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCIL 314 (345)
Q Consensus 251 gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~ 314 (345)
++ ++++++|++++++++++|| |+.|||+|++....+.| .+.+++.++
T Consensus 162 ~~-------~~~~~~L~~~la~l~~~~d--------P~~IVlGG~~~~~~~~~--~~~i~~~~~ 208 (226)
T 3lm2_A 162 GN-------AKWQKRVQDVVERLSAALE--------PDEVVIGGGNVERLENL--PPKCRRGDN 208 (226)
T ss_dssp CH-------HHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGCCCC--CTTEEECCT
T ss_pred HH-------HHHHHHHHHHHHHHHHHHC--------CCEEEEeChhhhhhhHH--HHHHHHHHH
Confidence 11 5778999999999999999 59999999999887754 555544443
No 27
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.92 E-value=5.2e-24 Score=211.03 Aligned_cols=290 Identities=8% Similarity=-0.007 Sum_probs=192.7
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCe---eEEEecCCCCc-cccCHHHHHHHHHHHHHHHHHHcCCCccc--
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCSNH-NSVGEDAARETIEKVMADALLKSGSNRSA-- 94 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i---~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~~~~~~~~~~~-- 94 (345)
.+++||||+|||++|++++|+ +|++ +.+.+.+.+.. ...+.+++++.|.+++++++++......+
T Consensus 60 ~G~~laiDlGGTnirv~lV~~---------~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~ 130 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISL---------AGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSXAGSV 130 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEE---------ETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCE
T ss_pred cceEEEEEeCCCeEEEEEEEe---------CCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhccccccccc
Confidence 357899999999999999999 7887 44444433322 22367899999999999999876533222
Q ss_pred cceeEEeecCC-CChh-----HH---H------HHHHHHHhhC---CCCce---EEEeCcHHHHHhccc-CCCCCeEEEE
Q 019144 95 VRAVCLAVSGV-NHPT-----DQ---Q------RILNWLRDIF---PGNVR---LYVHNDALAALASGT-MGKLHGCVLI 152 (345)
Q Consensus 95 i~~Igig~pG~-~~~~-----~~---~------~l~~~L~~~~---~~~~p---V~v~NDa~~a~~~~~-~g~~~~v~v~ 152 (345)
..|++++.|+. .+.+ .| + ++.+.|++.+ + .| |.|.||+|+++++++ .+.++.+.++
T Consensus 131 ~lGi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~~v~~~L~~~l~r~g--lpv~vval~NDa~~tll~e~~~~~~~~igli 208 (457)
T 2yhx_A 131 PLGFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAG--DXXXSVADIXDSHGILXXVNYTDAXIKMGII 208 (457)
T ss_dssp EEEEECCSCCCCSBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHHCTTEEEEEE
T ss_pred ceeeEEEEEEEEeecCceEEEeeccCCCcchhHHHHHHHHHhHhhcC--CcceeEEEEecchhhccchhhcCCccEEEEE
Confidence 34566666664 2211 02 2 7888888887 5 67 999999999999875 4667889999
Q ss_pred eCccceeeeecCCC----C------------eEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHc
Q 019144 153 AGTGTIAYGFTEDG----R------------DARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTL 216 (345)
Q Consensus 153 ~GTG~~g~gi~~dG----~------------~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (345)
+|||+ +++++.++ + ..-.+||||+- +++.- +-....+ ...|+..|.|+ ++++++.
T Consensus 209 lGTGv-gg~~i~~~~~i~kl~~~~~~~~~g~~~in~EwG~f~-~~~~~--lp~t~~D---~~lD~~s~~pG--q~fEkm~ 279 (457)
T 2yhx_A 209 FGSGV-NAAYWCDSTXIGDAADGGXXGGAGXMXICCDQSSFR-KAFPS--LPQIXYL---XTLNXXSPXAX--KTFXKNS 279 (457)
T ss_dssp ESSSE-EEEEEECGGGSSCTTSCSSSCSSCCEEEECCCTTTT-TTCSS--SCCCHHH---HHHHHHSSCSC--CHHHHHH
T ss_pred ECcEE-EEEEEECCCcccccccccccccCCceEEEEEcccCC-CCCCc--CCccccc---cccccccCchH--HHHHHHh
Confidence 99998 55677776 3 33488999963 32211 0000111 11233334444 3555554
Q ss_pred CCCChhhHHHH-----hhcC------------C---Ch---HHHh-----c--chHHHH-HHHH----cCC-----HHHH
Q 019144 217 ELSSPDELIGW-----TYVD------------P---SW---ARIA-----A--LVPVVV-SCAE----AGD-----EVAN 256 (345)
Q Consensus 217 ~~~~~~~l~~~-----~~~~------------~---~~---~~~~-----~--~~~~v~-~~a~----~gD-----~~a~ 256 (345)
+-...-+|.+. .... + +. +.+. . .++.++ +.+. .+| +.|.
T Consensus 280 SG~yLGel~R~il~~~~~~~~lf~~~~~~l~~~~~~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~~t~~D~~~v~~ia~ 359 (457)
T 2yhx_A 280 XAKNXGQSLRDVLMXFKXXGQXHXXXAXSFXAANVENTSYPAKIQKLPHFDLRXXXDLFXGDQGIAXKTXMKXVVRRXLF 359 (457)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSSSSSCCCSCCSTTCSCTHHHHHHHHCCSSSCHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHhcccccccccchhcccccCcChHHHHHHhcCCchhhhHHHHHHHHHhCCCccchhhHHHHHHHH
Confidence 31111122111 1100 0 00 0010 1 145666 6666 778 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhC-C--------CceeeCCCC
Q 019144 257 KILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY-P--------GAVPIRPKV 327 (345)
Q Consensus 257 ~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~-~--------~~~i~~~~~ 327 (345)
.+.+++++++|.+|+++++.++| .+..|+++||+ +.++.| .+.+++++++.. + .+++..+++
T Consensus 360 ~V~~RaA~l~A~~iaai~~~~~~------~~~~V~vdGsv-~~~p~f--~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~d 430 (457)
T 2yhx_A 360 LIAAYAFRLVVCXIXAICQKKGY------SSGHIAAXGSX-RSYSGF--SXNSATXNXNIYGWPQSAXXSKPIXITPAID 430 (457)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTC------SSEEEEEESTT-TTSTTH--HHHHHHHHHHHHCCCCSSGGGSSEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCC------CcEEEEEECCc-ccCchH--HHHHHHHHHHhhCcccccccCcceEEEECCC
Confidence 99999999999999999999994 23789999999 888876 999999998763 2 255667889
Q ss_pred ChHHHHHHHHHH
Q 019144 328 EPAVGAALLAWN 339 (345)
Q Consensus 328 a~~~GAa~la~~ 339 (345)
.+.+|||++|.-
T Consensus 431 gsg~GAAl~aa~ 442 (457)
T 2yhx_A 431 GXGAASXVIXSI 442 (457)
T ss_dssp TTTHHHHHHHHH
T ss_pred chhhhHHHHHHH
Confidence 999999988764
No 28
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.91 E-value=1.1e-23 Score=224.81 Aligned_cols=295 Identities=16% Similarity=0.112 Sum_probs=186.7
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCC----e-eEEEecCCCCc-cccCHHHHHHHHHHHHHHHHHHcCCCccc
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLP----V-LARAAAGCSNH-NSVGEDAARETIEKVMADALLKSGSNRSA 94 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~----i-~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 94 (345)
.+.+||||+|||++|++++|+ +|+ + +.+.+.+.+.. ...+.+++++.|.++|++++++.+.....
T Consensus 77 ~G~~laiDlGGTnirv~lv~~---------~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~~~~ 147 (917)
T 1cza_N 77 KGDFIALDLGGSSFRILRVQV---------NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKK 147 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEE---------EEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCTTSC
T ss_pred cceEEEEEeCCCeEEEEEEEe---------cCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 358899999999999999999 665 5 45555544321 12367899999999999999887654332
Q ss_pred cceeEEeecCCCCh---hH----------------HHHHHHHHHhhCC----C-CceEEEeCcHHHHHhccc-CCCCCeE
Q 019144 95 VRAVCLAVSGVNHP---TD----------------QQRILNWLRDIFP----G-NVRLYVHNDALAALASGT-MGKLHGC 149 (345)
Q Consensus 95 i~~Igig~pG~~~~---~~----------------~~~l~~~L~~~~~----~-~~pV~v~NDa~~a~~~~~-~g~~~~v 149 (345)
..+||++|++.+. +. +.++.+.|++.++ . ..||.|.||+|+++++++ .+.++.+
T Consensus 148 -~~lGi~fs~P~~q~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~i 226 (917)
T 1cza_N 148 -LPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEV 226 (917)
T ss_dssp -CCEEEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEE
T ss_pred -ccEEEEEccccccCcCCceEEEecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEE
Confidence 2567777776321 10 1366777777652 1 147999999999999874 4667889
Q ss_pred EEEeCccceeeeecCCCC-----------eEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCC
Q 019144 150 VLIAGTGTIAYGFTEDGR-----------DARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLEL 218 (345)
Q Consensus 150 ~v~~GTG~~g~gi~~dG~-----------~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (345)
++++|||+ +++++.+|+ ....+||||+. +.+.--.+ ....+....+.++... .+|++++.+
T Consensus 227 glilGTGv-ngg~i~~g~~i~~~~G~~g~~~in~E~G~f~-~~~~l~~~-~t~~D~~~dc~~g~pg----~g~~Ek~~S- 298 (917)
T 1cza_N 227 GLIIGTGT-NACYMEELRHIDLVEGDEGRMCINTEWGAFG-DDGSLEDI-RTEFDRAIDAYSLNPG----KQLFEKMVS- 298 (917)
T ss_dssp EEEESSSE-EEEEEEEGGGCTTSSCCSSEEEEECCGGGTT-TTTTTTTT-CCHHHHHHHHTSSSTT----SSTTHHHHS-
T ss_pred EEEEECCc-ceEEEecCcccccccCCCCceEEeccccccC-CccccccC-CCccccccccCCcCCC----ccHhHHHhh-
Confidence 99999998 557878877 34467777752 11100000 0000111112222110 122222221
Q ss_pred CChhhHHH---H----h-hc------C----------CChHHH---------hcchHHHHHHH----HcCC-----HHHH
Q 019144 219 SSPDELIG---W----T-YV------D----------PSWARI---------AALVPVVVSCA----EAGD-----EVAN 256 (345)
Q Consensus 219 ~~~~~l~~---~----~-~~------~----------~~~~~~---------~~~~~~v~~~a----~~gD-----~~a~ 256 (345)
...|.+ . + .. . .+...+ -..+..|++.+ ..+| +.|.
T Consensus 299 --G~yLgel~r~~l~~~~~~~~~~~~~~~~~l~~~~~l~t~~vs~~~~~~~~~~~~~~i~~~~~~~~~~~D~~~~~~~a~ 376 (917)
T 1cza_N 299 --GMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNAKEILTRLGVEPSDDDCVSVQHVCT 376 (917)
T ss_dssp --HHHHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSSCHHHHHHHTCTTTHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred --hhhHHHHHHHHHHHhhccccccccccchhhccccccChHHHHHHhcccccHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 111111 0 0 00 0 011100 00123456665 3555 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--ccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCC--ceeeCCCCChHHH
Q 019144 257 KILQDSVEELALSVKAVVQRL--SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG--AVPIRPKVEPAVG 332 (345)
Q Consensus 257 ~il~~~~~~Lg~~l~~lv~~l--d~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~--~~i~~~~~a~~~G 332 (345)
.+++++++++|.+|+++++.+ ||. ....++.|+++||++..++.| .+.+++.+++..+. ++++.+++++.+|
T Consensus 377 ~v~~raa~llA~gia~ii~~l~~dp~--~~~~~~~IvigGgV~~~~~~~--~~~l~~~l~~~~~~~~~~i~~a~dgs~~G 452 (917)
T 1cza_N 377 IVSFRSANLVAATLGAILNRLRDNKG--TPRLRTTVGVDGSLYKTHPQY--SRRFHKTLRRLVPDSDVRFLLSESGSGKG 452 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CSSEEEEEEEECHHHHHCSSH--HHHHHHHHHHHCTTEEEEEEECTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCc--ccCcceEEEECCchhhccHHH--HHHHHHHHHHhcCCCceEEEEeccchHHH
Confidence 999999999999999999999 841 000117899999999988876 89999999987654 5566689999999
Q ss_pred HHHHHHH
Q 019144 333 AALLAWN 339 (345)
Q Consensus 333 Aa~la~~ 339 (345)
||++|..
T Consensus 453 AA~laa~ 459 (917)
T 1cza_N 453 AAMVTAV 459 (917)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999864
No 29
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.91 E-value=1.5e-24 Score=214.84 Aligned_cols=291 Identities=14% Similarity=0.091 Sum_probs=187.1
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCC-C----e-eEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccc
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPL-P----V-LARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g-~----i-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 94 (345)
.+++++||+|||++|++++++ +| + + ..+...| .+....+.+++++.|.++|++++++.+....
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l---------~G~~~~~~i~~~~~~ip-~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~- 135 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTL---------EGKGKSPRIQERTYCIP-AEKMSGSGTELFKYIAETLADFLENNGMKDK- 135 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEE---------CC-CCCCEEEEEEECCC-TTTTTSBHHHHHHHHHHHHHHHHHHTTCCSS-
T ss_pred cceEEEEEeCCCeEEEEEEec---------CCCCcceEEEEEEEecC-CcccCCCHHHHHHHHHHHHHHHHHhcCCCcc-
Confidence 358899999999999999999 66 4 4 3333333 3323356799999999999999998775443
Q ss_pred cceeEEeecCCCCh---hH----------------HHHHHHHHHhhC---CCCceE---EEeCcHHHHHhccc-CCCCCe
Q 019144 95 VRAVCLAVSGVNHP---TD----------------QQRILNWLRDIF---PGNVRL---YVHNDALAALASGT-MGKLHG 148 (345)
Q Consensus 95 i~~Igig~pG~~~~---~~----------------~~~l~~~L~~~~---~~~~pV---~v~NDa~~a~~~~~-~g~~~~ 148 (345)
...+|++.|++++. +. +.++.+.|++.+ + .|| .|.||+++++++++ .+.++.
T Consensus 136 ~~~lG~tfsfPv~q~~~~~G~l~~wtKgf~~~~~~g~dv~~~L~~al~r~~--l~v~v~al~NDtv~tlla~~y~~~~~~ 213 (451)
T 1bdg_A 136 KFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRE--LNVKCVAVVNDTVGTLASCALEDPKCA 213 (451)
T ss_dssp CEEEEEEECSCEEEETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTT--CCEEEEEEECHHHHHHHHHHTTCTTEE
T ss_pred ccceEEEEeeEeccccCCCeEEeccccccCCCCCCCCcHHHHHHHHHHHcC--CCcceEEEEEchHHHHHHhcccCCCcE
Confidence 37899999999643 11 136777777777 4 676 99999999988874 455678
Q ss_pred EEEEeCccceeeeecCCCCeEE--ec-cCCCCcCC--cCcHHH-----HHHHHHHHHHHHhcCCCCCChhHHHHHHHcCC
Q 019144 149 CVLIAGTGTIAYGFTEDGRDAR--AA-GAGPILGD--WGSGYG-----IAAQALTAVIRAYDGRGPDTMLTSNILSTLEL 218 (345)
Q Consensus 149 v~v~~GTG~~g~gi~~dG~~~~--~G-g~G~~~gd--~G~a~~-----iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (345)
+.+++|||+ +++++.+++.+. .| ++|||... +|.-.. .-....+..+.+.++. + -.++++++.+-
T Consensus 214 iglIlGTG~-na~yve~~~~i~~~~g~~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~-p---g~q~~Ek~~SG 288 (451)
T 1bdg_A 214 VGLIVGTGT-NVAYIEDSSKVELMDGVKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLH-P---GKQLYEKMVSG 288 (451)
T ss_dssp EEEEESSSE-EEEEEEETTTCGGGCSCSSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSS-T---TSCTTHHHHSH
T ss_pred EEEEEeCCc-ceEEEEcCccccCcCCCccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCC-C---Ccccchhhhhh
Confidence 999999998 556777776522 11 24444332 121100 0000111111111111 1 12222332210
Q ss_pred CChhhHH-----HHhh--------------c--CCCh---HHHh-------cchHHHHHH-HH-----cCC-----HHHH
Q 019144 219 SSPDELI-----GWTY--------------V--DPSW---ARIA-------ALVPVVVSC-AE-----AGD-----EVAN 256 (345)
Q Consensus 219 ~~~~~l~-----~~~~--------------~--~~~~---~~~~-------~~~~~v~~~-a~-----~gD-----~~a~ 256 (345)
....+|. +... . ..+. +.+. ..++.+++. +. .+| +.|.
T Consensus 289 ~yLgel~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~ 368 (451)
T 1bdg_A 289 MYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACE 368 (451)
T ss_dssp HHHHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccccccccchHhhcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 0000111 1100 0 0000 0000 023667766 43 678 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCc--cEEEEcCcccCcccccchHHHHHHHHhhC-C--CceeeCCCCChHH
Q 019144 257 KILQDSVEELALSVKAVVQRLSLSGEDGKHSF--PLVMVGGVLEANRRWDIGREVVKCILRDY-P--GAVPIRPKVEPAV 331 (345)
Q Consensus 257 ~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~--~IVlgGgl~~~~~~~~l~~~~~~~l~~~~-~--~~~i~~~~~a~~~ 331 (345)
.|++++++++|.+++++++.++| + .|+++||+++.++.| .+.+++.+++.. | .+++..+++++.+
T Consensus 369 ~V~~RaA~lla~~ia~i~~~~~~--------~~~~V~i~Ggv~~~~~~~--~~~l~~~l~~~~~~~~~i~~~l~~dgs~i 438 (451)
T 1bdg_A 369 MVVKRAAYLAGAGIACILRRINR--------SEVTVGVDGSLYKFHPKF--CERMTDMVDKLKPKNTRFCLRLSEDGSGK 438 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC--------SEEEEEEESHHHHHCTTH--HHHHHHHHHHHSCTTCEEEEEECTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--------CceEEEEeCchhcCchhH--HHHHHHHHHHHhCCCCcEEEEECCCccHH
Confidence 99999999999999999999994 6 788999999888765 999999998873 3 3455557889999
Q ss_pred HHHHHHHH
Q 019144 332 GAALLAWN 339 (345)
Q Consensus 332 GAa~la~~ 339 (345)
|||++|+.
T Consensus 439 GAAllA~~ 446 (451)
T 1bdg_A 439 GAAAIAAS 446 (451)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 99999864
No 30
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.86 E-value=1.1e-21 Score=209.60 Aligned_cols=303 Identities=15% Similarity=0.117 Sum_probs=190.8
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCC--ee----EEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccc
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLP--VL----ARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~--i~----~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 94 (345)
.+.+|+||+|||++|+++++++ .++ ++ .+...| .+....+.+++++.|.++|++++++.+.....
T Consensus 525 ~G~~lalDlGGTn~Rv~~V~l~--------~g~~~~~~~~~~~~~ip-~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~ 595 (917)
T 1cza_N 525 NGDFLALDLGGTNFRVLLVKIR--------SGKKRTVEMHNKIYAIP-IEIMQGTGEELFDHIVSCISDFLDYMGIKGPR 595 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEEE--------CSTTCEEEEEEEEECCC-HHHHTSBHHHHHHHHHHHHHHHHHHHTCCSSC
T ss_pred ceEEEEEEECCCcEEEEEEEeC--------CCcceeEEeeeeEEecC-cccccCCHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 4588999999999999999993 143 44 222322 22222467889999999999999987765544
Q ss_pred cceeEEeecCCCChh--------HH-----------HHHHHHHHhhC----CC-CceEEEeCcHHHHHhccc-CCCCCeE
Q 019144 95 VRAVCLAVSGVNHPT--------DQ-----------QRILNWLRDIF----PG-NVRLYVHNDALAALASGT-MGKLHGC 149 (345)
Q Consensus 95 i~~Igig~pG~~~~~--------~~-----------~~l~~~L~~~~----~~-~~pV~v~NDa~~a~~~~~-~g~~~~v 149 (345)
+ .+|++.|++++.. .| .++.+.|++.+ +. -.||.|.||+++.+++++ .+.++.+
T Consensus 596 l-~lG~tfsfPv~q~~i~~~~L~~WtKgf~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~i 674 (917)
T 1cza_N 596 M-PLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEV 674 (917)
T ss_dssp C-EEEEEECSCEEEEETTEEEECCCCTTCCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEE
T ss_pred e-eEEEEeeccccccccCccEECceecccccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEE
Confidence 5 8999999996421 12 35556665555 31 139999999999988864 4566788
Q ss_pred EEEeCccceeeeecCCCCeEE--eccCCCCcCC--cCcHHHHHHHH-----HHHHHHHhcCCCCCChhHHHHHHHcCCCC
Q 019144 150 VLIAGTGTIAYGFTEDGRDAR--AAGAGPILGD--WGSGYGIAAQA-----LTAVIRAYDGRGPDTMLTSNILSTLELSS 220 (345)
Q Consensus 150 ~v~~GTG~~g~gi~~dG~~~~--~Gg~G~~~gd--~G~a~~iG~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 220 (345)
.+++|||+ +++++.+++.+. .|++|||... +| .||... ....-...|...+.++ .++++++.+-..
T Consensus 675 glIlGTG~-na~y~e~~~~i~~~~g~~g~m~In~EwG---~fg~~~~l~~~~T~~D~~~d~~s~~pG-~q~~Ek~~SG~y 749 (917)
T 1cza_N 675 GLIVGTGS-NACYMEEMKNVEMVEGDQGQMCINMEWG---AFGDNGCLDDIRTHYDRLVDEYSLNAG-KQRYEKMISGMY 749 (917)
T ss_dssp EEEESSSE-EEEEEEETTTCTTSSCCSSEEEEECCGG---GTTTTSTTTTTCCHHHHHHHHTSTTTT-SCTTGGGTSTTT
T ss_pred EEEEeCCe-eEEEEEcCccccCcCCCcCcEEEecccc---cCCCcccccCCCCchhhhhhhcCCCCC-CCchHHhhhHhH
Confidence 99999998 556778876432 3567776543 23 222210 0000001111111111 223333322111
Q ss_pred hhhHHHH-----hh------cC-C---------ChHHHh---------cchHHHHHHHH----cCC-----HHHHHHHHH
Q 019144 221 PDELIGW-----TY------VD-P---------SWARIA---------ALVPVVVSCAE----AGD-----EVANKILQD 261 (345)
Q Consensus 221 ~~~l~~~-----~~------~~-~---------~~~~~~---------~~~~~v~~~a~----~gD-----~~a~~il~~ 261 (345)
..++.+. .. .. + +...+. ...+.+++.+. .+| +.|..++++
T Consensus 750 Lgel~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~ie~d~~~~~~~~~i~~~~~~~~~~~D~~~~~~ia~~v~~R 829 (917)
T 1cza_N 750 LGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGLNSTCDDSILVKTVCGVVSRR 829 (917)
T ss_dssp HHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSCCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccccccchhhccCCccchHHhhhhhcCcchhhHHHHHHHHhCCCCChHHHHHHHHHHHHHHHH
Confidence 1111111 00 00 0 000000 01223676665 678 999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCC--ceeeCCCCChHHHHHHHHHH
Q 019144 262 SVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG--AVPIRPKVEPAVGAALLAWN 339 (345)
Q Consensus 262 ~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~--~~i~~~~~a~~~GAa~la~~ 339 (345)
+++++|.+|+++++.++|....+..+..|+++||+++.++.| .+.+++.+++..|. +++..+++.+.+|||++|.-
T Consensus 830 aA~l~a~~iaai~~~~~~~~~~~~~~~~V~vdGsv~~~~p~f--~~~~~~~l~~l~~~~~v~~~~~~dgsg~GAAl~aa~ 907 (917)
T 1cza_N 830 AAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHF--SRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAV 907 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTH--HHHHHHHHHHHSTTEEEEEEECSSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccccCccceEEEECCHHHHcCcHH--HHHHHHHHHHhCCCCceEEEEecCChHHHHHHHHHH
Confidence 999999999999999985111111126899999999998876 99999999888665 45556889999999998874
Q ss_pred h
Q 019144 340 S 340 (345)
Q Consensus 340 ~ 340 (345)
.
T Consensus 908 ~ 908 (917)
T 1cza_N 908 G 908 (917)
T ss_dssp H
T ss_pred H
Confidence 3
No 31
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=99.67 E-value=8e-15 Score=145.62 Aligned_cols=289 Identities=12% Similarity=0.070 Sum_probs=169.2
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCC-----eeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCc-cc
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLP-----VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNR-SA 94 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~-----i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~-~~ 94 (345)
.+.+|++|+|||++|++++++ +|+ ...+...| .+....+.+++++.|.++|++++++..... .+
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l---------~g~~~~~~~~~~~~Ip-~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~ 148 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKL---------GGNHDFDTTQNKYRLP-DHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSE 148 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEE---------ESSSCEEEEEEEEECC-TTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSS
T ss_pred ceEEEEEEecCCeEEEEEEEE---------CCCCceEEEEEEEecC-chhccCCHHHHHHHHHHHHHHHHHHhccccccc
Confidence 358999999999999999999 444 32333332 333323478999999999999999876432 34
Q ss_pred cceeEEeecCCCChhH-------------------HHHHHHHHHhhC---CCCce---EEEeCcHHHHHhccc-CCCCCe
Q 019144 95 VRAVCLAVSGVNHPTD-------------------QQRILNWLRDIF---PGNVR---LYVHNDALAALASGT-MGKLHG 148 (345)
Q Consensus 95 i~~Igig~pG~~~~~~-------------------~~~l~~~L~~~~---~~~~p---V~v~NDa~~a~~~~~-~g~~~~ 148 (345)
...+|++.|+|.+.+. +.++.+.|++.+ + .| +.|.||++++++++. .+.+..
T Consensus 149 ~l~lGftfSfP~~q~~i~~g~li~wtKGF~i~~~~G~dv~~~L~~al~r~g--l~v~v~aivNDtv~tll~~~y~~~~~~ 226 (485)
T 3o8m_A 149 PLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLN--IPINVVALINDTTGTLVASLYTDPQTK 226 (485)
T ss_dssp CEEEEEEECSCEECSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTT--CCEEEEEEECHHHHHHHHHHHHCTTEE
T ss_pred ccceEEEEeeeEEEcccCCEEEeeccccccCCCcCCccHHHHHHHHHHhcC--CCceEEEEEEcHHHHHHHHhhCCCCcE
Confidence 5678888888842110 135666666665 4 45 789999999988764 455567
Q ss_pred EEEEeCccceeeeecCC------------------CCeEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHH
Q 019144 149 CVLIAGTGTIAYGFTED------------------GRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTS 210 (345)
Q Consensus 149 v~v~~GTG~~g~gi~~d------------------G~~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~ 210 (345)
+.+++|||.+++ ++.+ ++..-.=|||.. ++... .+=....+..+... ...+.- +
T Consensus 227 iglIlGTG~N~~-y~e~~~~i~k~~~~~~~~~~~~~~miINtEwG~F-~~~~~--~lp~T~~D~~lD~~-S~nPG~---Q 298 (485)
T 3o8m_A 227 MGIIIGTGVNGA-YYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSF-DNEHL--VLPRTKYDVIIDEE-SPRPGQ---Q 298 (485)
T ss_dssp EEEEESSSEEEE-EEEEGGGCGGGTTTCCTTSCTTCEEEEECCGGGT-TTTCS--SSCCCHHHHHHHHH-SSSTTS---C
T ss_pred EEEEEecCcceE-EEeeccccccccccccccCCCCCcEEEEcccccC-CCCcc--cCCCCchhhHHhhc-CCCCCc---e
Confidence 889999998665 5432 112223456543 21100 00000111111111 111111 1
Q ss_pred HHHHHcCCCChhhHHH-----Hhhc-----C-----------CChH---HHh-------cchHHHHHHHH-----cC---
Q 019144 211 NILSTLELSSPDELIG-----WTYV-----D-----------PSWA---RIA-------ALVPVVVSCAE-----AG--- 251 (345)
Q Consensus 211 ~~~~~~~~~~~~~l~~-----~~~~-----~-----------~~~~---~~~-------~~~~~v~~~a~-----~g--- 251 (345)
.++...+--..-+|.+ .... . .+.. .+. ..+..+++... ..
T Consensus 299 ~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~~~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~~t~~d~~ 378 (485)
T 3o8m_A 299 AFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTVVERK 378 (485)
T ss_dssp HHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSCCGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCCCCHHHHH
T ss_pred eeccccccchHHHHHHHHHHHHHHcCcccCCCCcHHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCCCCHHHHH
Confidence 1111111000011111 1100 0 0000 000 00112221100 00
Q ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccE--EEEcCcccCcccccchHHHHHHHHhhCC---------
Q 019144 252 --DEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPL--VMVGGVLEANRRWDIGREVVKCILRDYP--------- 318 (345)
Q Consensus 252 --D~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~I--VlgGgl~~~~~~~~l~~~~~~~l~~~~~--------- 318 (345)
-..|..|.+++++++|.+++++++..++ +.+ -+.|++++.++.| .+.+++.+++..+
T Consensus 379 ~vr~i~~~V~~RAA~L~Aa~iaail~~~~~--------~~~~VgvdGSv~~~~P~f--~~~~~~~l~~ll~~~~~~~~~~ 448 (485)
T 3o8m_A 379 LIRKLAELVGTRAARLTVCGVSAICDKRGY--------KTAHIAADGSVFNRYPGY--KEKAAQALKDIYNWDVEKMEDH 448 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------SSEEEEEESHHHHHSTTH--HHHHHHHHHHHHTCCCCSGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEEecChhccCccH--HHHHHHHHHHHhccccccCCCc
Confidence 1567778999999999999999999995 554 4579999999887 8888888887632
Q ss_pred CceeeCCCCChHHHHHHHHHH
Q 019144 319 GAVPIRPKVEPAVGAALLAWN 339 (345)
Q Consensus 319 ~~~i~~~~~a~~~GAa~la~~ 339 (345)
.+++..+++.+.+|||++|.-
T Consensus 449 ~v~l~~a~DGSg~GAAliAa~ 469 (485)
T 3o8m_A 449 PIQLVAAEDGSGVGAAIIACL 469 (485)
T ss_dssp SEEEEECCCTTTHHHHHHHHH
T ss_pred eEEEEEcCCChHHHHHHHHHH
Confidence 256667889999999988764
No 32
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=99.43 E-value=2.3e-11 Score=119.24 Aligned_cols=301 Identities=17% Similarity=0.113 Sum_probs=164.1
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeE-EEecC-CCCccccCHHHHHHHHHHHHHHHHHHcCCCcccc-ce
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLA-RAAAG-CSNHNSVGEDAARETIEKVMADALLKSGSNRSAV-RA 97 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~-~~~~~-~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i-~~ 97 (345)
.+.++++|+|||++|++++++ .+.+.- +.... +........+++++.|.++|.+++++.+.....+ .|
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~l---------~g~~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~~~~lplG 128 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVRV---------TTGVQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLG 128 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEEE---------SSSEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCTTCCCCEE
T ss_pred eeEEEEEEecCCeEEEEEEEE---------CCceEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcccccCcce
Confidence 358999999999999999999 554321 12222 2222223568999999999999999876543222 34
Q ss_pred eEEeecCCCCh-h--------------------HHHHHHHHHHhh--CCCCceEEEeCcHHHHHhccc-CCCCCeEEEEe
Q 019144 98 VCLAVSGVNHP-T--------------------DQQRILNWLRDI--FPGNVRLYVHNDALAALASGT-MGKLHGCVLIA 153 (345)
Q Consensus 98 Igig~pG~~~~-~--------------------~~~~l~~~L~~~--~~~~~pV~v~NDa~~a~~~~~-~g~~~~v~v~~ 153 (345)
+.++.|.--.. + -...|.+.++++ ++. ..+.|.||+.+.++++. .+.+..+.++.
T Consensus 129 ftFSFP~~Q~sl~~g~Li~wtKGF~~~~~~G~dv~~lL~~al~r~~~~~v-~vvAivNDTvgTLla~~y~~~~~~iglIl 207 (445)
T 3hm8_A 129 FTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVEL-NVVAIVNDTVGTMMSCGYEDPRCEIGLIV 207 (445)
T ss_dssp EEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCSCC-CSEEEECHHHHHHHHHHTTCTTEEEEEEE
T ss_pred EEEeeeeEeccCCceEEEEeeccccCCCCCCCcHHHHHHHHHHhcCCCCc-ceEEEecCcHHHHHhhccCCCCceEEEEE
Confidence 44544442110 0 012455566554 231 35999999999888764 44456788999
Q ss_pred CccceeeeecC-------C---CCeEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCC-------------hhHH
Q 019144 154 GTGTIAYGFTE-------D---GRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDT-------------MLTS 210 (345)
Q Consensus 154 GTG~~g~gi~~-------d---G~~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~-------------~~~~ 210 (345)
|||.+++-+.. + ++..-.=|||.. ++.+....+ ....+..+... ...+.. .+.+
T Consensus 208 GTGtNa~y~e~~~~i~k~~~~~~~miINtEwG~F-g~~~~l~~~-~T~~D~~lD~~-S~~PG~q~fEKmiSG~YLGEivR 284 (445)
T 3hm8_A 208 GTGTNACYMEELRNVAGVPGDSGRMCINMEWGAF-GDDGSLAML-STRFDASVDQA-SINPGKQRFEKMISGMYLGEIVR 284 (445)
T ss_dssp SSSEEEEEEEEGGGCTTSCCCSSEEEEECCGGGT-TTTTTTTTT-CCHHHHHHHHT-SSSTTSSTTGGGTSHHHHHHHHH
T ss_pred eCCceEEEEEecccccccCCCCCcEEEEcchhhc-CCCCCCcCC-CCccchHHhcC-CCCCCceEeeeecchhhHHHHHH
Confidence 99997654421 1 333333355542 332210000 00011111110 000000 0011
Q ss_pred H-HHHHc------CCCChhhH----------HHHhhcCCChHHHhcchHHHHHHHHc----C-----CHHHHHHHHHHHH
Q 019144 211 N-ILSTL------ELSSPDEL----------IGWTYVDPSWARIAALVPVVVSCAEA----G-----DEVANKILQDSVE 264 (345)
Q Consensus 211 ~-~~~~~------~~~~~~~l----------~~~~~~~~~~~~~~~~~~~v~~~a~~----g-----D~~a~~il~~~~~ 264 (345)
. +..+. +-..++.| +..+..+.. ... .+..+++...- . -..|..|.+++++
T Consensus 285 liL~~l~~~~~lf~~~~~~~L~~~~~l~T~~ls~ie~D~~--~~~-~~~~~l~~l~~~~t~~d~~~vr~i~~~V~~RaA~ 361 (445)
T 3hm8_A 285 HILLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESDSL--ALR-QVRAILEDLGLPLTSDDALMVLEVCQAVSQRAAQ 361 (445)
T ss_dssp HHHHHHHHHTSSGGGCCCGGGGSTTCSCHHHHHHHTCTTC--CHH-HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCcHHHcCCCCCCcHHHHHHhcCCc--hHH-HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 11100 00000000 000000000 000 01111111000 0 1567788999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCC--ceeeCCCCChHHHHHHHHHH
Q 019144 265 ELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG--AVPIRPKVEPAVGAALLAWN 339 (345)
Q Consensus 265 ~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~--~~i~~~~~a~~~GAa~la~~ 339 (345)
..|-+|+.+++..+........+-.|-+.|++++.++.| .+.+++.+.+..|. +++..+++.+-+|||++|.-
T Consensus 362 L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f--~~~l~~~l~~l~~~~~v~~~~s~DGSg~GAAl~AA~ 436 (445)
T 3hm8_A 362 LCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRF--SSLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAV 436 (445)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTH--HHHHHHHHHHHCTTEEEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccccCcEEEEeceehccChhH--HHHHHHHHHHhCCCCcEEEEECCCCchHHHHHHHHH
Confidence 999999999998852100111134788999999999887 88999999888775 44556788999999998864
No 33
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=99.41 E-value=4e-11 Score=118.40 Aligned_cols=303 Identities=15% Similarity=0.103 Sum_probs=167.8
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCC---CeeE--EEec-CCCCccccCHHHHHHHHHHHHHHHHHHcCCCccc
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPL---PVLA--RAAA-GCSNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g---~i~~--~~~~-~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 94 (345)
.+.++++|+|||+.|++++++.| ++ ..+. .... .+......+.+++++.|.++|.+++++.+... +
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~g-------~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~~-~ 147 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVGE-------GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKH-K 147 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEEC-----------CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCSS-S
T ss_pred ceEEEEEEecCceEEEEEEEECC-------CCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhccccc-c
Confidence 35899999999999999999942 11 0121 1112 12212224568999999999999999877543 3
Q ss_pred cceeEEeecCCCC-----------------------hhHHHHHHHHHHhh--CCCCceEEEeCcHHHHHhcccC-CCCCe
Q 019144 95 VRAVCLAVSGVNH-----------------------PTDQQRILNWLRDI--FPGNVRLYVHNDALAALASGTM-GKLHG 148 (345)
Q Consensus 95 i~~Igig~pG~~~-----------------------~~~~~~l~~~L~~~--~~~~~pV~v~NDa~~a~~~~~~-g~~~~ 148 (345)
...+|+..+=|.. .+-...|.+.|+++ ++. ..+.|.||+.+.+++... ..+..
T Consensus 148 ~lpLGfTFSFP~~Q~sl~~g~Li~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v-~v~AlvNDTVgTL~s~aY~~~~~~ 226 (470)
T 3f9m_A 148 KLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEM-DVVAMVNDTVATMISCYYEDHQCE 226 (470)
T ss_dssp CCEEEEEECSCEEEEETTEEEECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCC-EEEEEECHHHHHHHHHHTTCTTEE
T ss_pred ccceEEEEeccccccCCCceEEEeccccccCCCcCCccHHHHHHHHHHhcCCCCC-cEEEEEEcCHHHHHhcccCCCCce
Confidence 3345555554421 11123567777776 342 468899999988887543 33456
Q ss_pred EEEEeCccceeeeecC----------CCCeEEeccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCCh-----------
Q 019144 149 CVLIAGTGTIAYGFTE----------DGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTM----------- 207 (345)
Q Consensus 149 v~v~~GTG~~g~gi~~----------dG~~~~~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~----------- 207 (345)
+.+|.|||..++-+.. .++..-.=|||.. ++.+.--.+ ....+..+... ...+.-.
T Consensus 227 iGlI~GTGtNa~Y~E~~~~I~k~~~~~~~miINtEwG~F-g~~~~l~~~-~T~~D~~lD~~-S~nPG~Q~fEKmiSG~YL 303 (470)
T 3f9m_A 227 VGMIVGTGCNACYMEEMQNVELVEGDEGRMCVNTEWGAF-GDSGELDEF-LLEYDRLVDES-SANPGQQLYEKLIGGKYM 303 (470)
T ss_dssp EEEEESSSEEEEEEEEGGGCTTSSCCSSEEEEECCGGGT-TTTSTTGGG-CCHHHHHHHHH-SSSTTSCHHHHTTCHHHH
T ss_pred EEEEEecCCceEEeeeccccccccCCCCcEEEeechhhc-CCCcccCCC-CCcccHHHhhc-CCCCCceeeccccchhhH
Confidence 7899999998875531 1333333356542 332210000 00011111110 0001100
Q ss_pred --hHHH-HHHHcC------CCChh----------hHHHHhhcCCChHHHhcchHHHHHHHHc----C-----CHHHHHHH
Q 019144 208 --LTSN-ILSTLE------LSSPD----------ELIGWTYVDPSWARIAALVPVVVSCAEA----G-----DEVANKIL 259 (345)
Q Consensus 208 --~~~~-~~~~~~------~~~~~----------~l~~~~~~~~~~~~~~~~~~~v~~~a~~----g-----D~~a~~il 259 (345)
+.+. +..... -..++ ..+..+..+.... ..++.+++...- . -..|..|.
T Consensus 304 GEivRliL~~l~~~~~lf~~~~~~~L~~~~~l~T~~ls~ie~d~~~~---~~~~~il~~l~~~~~~~d~~~vr~i~~~V~ 380 (470)
T 3f9m_A 304 GELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR---KQIYNILSTLGLRPSTTDCDIVRRACESVS 380 (470)
T ss_dssp HHHHHHHHHHHHHTTCSGGGCCCTTTTSTTCSCHHHHHHHHTCCSSC---HHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcCCCCcHHhcCCCCcCchHHhhhccCCCch---HHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 0000 000000 00000 0000011100000 011122221000 0 15677889
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCC--ceeeCCCCChHHHHHHHH
Q 019144 260 QDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG--AVPIRPKVEPAVGAALLA 337 (345)
Q Consensus 260 ~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~--~~i~~~~~a~~~GAa~la 337 (345)
+++++..|.+|+.+++..+........+-.|-+.|++++.++.| .+.+++.+++..|. +++..+++.+.+|||++|
T Consensus 381 ~RaA~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~f--~~~~~~~l~~l~~~~~v~l~~a~DGSg~GAAliA 458 (470)
T 3f9m_A 381 TRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF--KERFHASVRRLTPSCEITFIESEEGSGRGAALVS 458 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTTH--HHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCchH--HHHHHHHHHHHcCCCeEEEEEcCCCcHHHHHHHH
Confidence 99999999999999998863111111224789999999999887 99999999888775 445567899999999998
Q ss_pred HHh
Q 019144 338 WNS 340 (345)
Q Consensus 338 ~~~ 340 (345)
.-.
T Consensus 459 a~a 461 (470)
T 3f9m_A 459 AVA 461 (470)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 34
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.05 E-value=2.2e-08 Score=92.25 Aligned_cols=245 Identities=19% Similarity=0.246 Sum_probs=128.0
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
|+||||+|+|+++++++|. +++++........ ..++ ...+++++++++++.....+..++.
T Consensus 2 ~~lGID~GsT~tk~av~d~---------~~~il~~~~~~~g----~~~e----~a~~vl~~~~~~a~~~~~~~~~~a~-- 62 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKN---------GEDIVASETISSG----TGTT----GPSRVLEKLYGKTGLAREDIKKVVV-- 62 (276)
T ss_dssp EEEEEEECSSCEEEEEEET---------TTEEEEEEEESCC----TTSS----HHHHHHHHHHHHHCCCGGGEEEEEE--
T ss_pred eEEEEEcCccEEEEEEEEC---------CCeEEEEEEecCC----CCHH----HHHHHHHHHHHHCCCcchhcccccc--
Confidence 8999999999999999998 7888887654321 1233 2334677888888877666655543
Q ss_pred cCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhccc--CCCCCeEEEEeCccceeeeecCCCCeEE--eccCCCCc
Q 019144 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGKLHGCVLIAGTGTIAYGFTEDGRDAR--AAGAGPIL 178 (345)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~--~g~~~~v~v~~GTG~~g~gi~~dG~~~~--~Gg~G~~~ 178 (345)
.|...- .+. .|...-|...+.+++.. ....+.++.+.|.+.-..-+..+|.+.. .|+-
T Consensus 63 t~~~~~------------a~~--~~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~---- 124 (276)
T 4ehu_A 63 TGYGRM------------NYS--DADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDK---- 124 (276)
T ss_dssp ESTTGG------------GCC--SCSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEEEEEEECS----
T ss_pred CchHHH------------Hhh--CCCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceEEEEeCCC----
Confidence 332210 233 57778898887766542 3344555555554443333445666532 1111
Q ss_pred CCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHhc----ch-HHHHHHHHcCCH
Q 019144 179 GDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAA----LV-PVVVSCAEAGDE 253 (345)
Q Consensus 179 gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~-~~v~~~a~~gD~ 253 (345)
.+.|. +++ .+. +...++. +.++.-..........++.+ |+ ..+..+..++.+
T Consensus 125 ~~~g~-G~f----~d~-----------------~a~~l~~-~~~~~~~~~~~a~~~~~i~~~~~~f~~s~~~~~~~~~~~ 181 (276)
T 4ehu_A 125 CAAGT-GRF----LDV-----------------MAKIIEV-DVSELGSISMNSQNEVSISSTCTVFAESEVISHLSENAK 181 (276)
T ss_dssp CSTTS-HHH----HHH-----------------HHHHHTC-CGGGHHHHHTTCSSCCCCCCCSHHHHHHHHHHHHHTTCC
T ss_pred cCcch-hhH----HHH-----------------HHHHhcc-ChhhhHHHHhcCCCCCCcCCccchhhhhHHHHhhhcccc
Confidence 12222 221 111 1111221 11111111110000000110 11 133344445543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeC---CCCChH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIR---PKVEPA 330 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~---~~~a~~ 330 (345)
. ..++......+...+...+..... ...||+.||+... +. +++.+++.+.. ++.. ++..++
T Consensus 182 ~-~di~a~~~~~v~~~l~~~~~~~~~-------~~~vvl~GGva~n-~~--lr~~l~~~~g~-----~~~~p~~p~~~~A 245 (276)
T 4ehu_A 182 I-EDIVAGIHTSVAKRVSSLVKRIGV-------QRNVVMVGGVARN-SG--IVRAMAREINT-----EIIVPDIPQLTGA 245 (276)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHCC-------CSSEEEESGGGGC-HH--HHHHHHHHHTS-----CEECCSSGGGHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhccc-------CCeEEEecCccch-HH--HHHHHHHHHCC-----CeeeCCCcchHHH
Confidence 2 244444445555555554444432 4689999998865 32 36666655532 2322 456789
Q ss_pred HHHHHHHHHhhhc
Q 019144 331 VGAALLAWNSFMN 343 (345)
Q Consensus 331 ~GAa~la~~~~~~ 343 (345)
+|||++|++...+
T Consensus 246 ~GAAl~A~~~~~~ 258 (276)
T 4ehu_A 246 LGAALYAFDEAKE 258 (276)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999877643
No 35
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.04 E-value=1.7e-08 Score=93.16 Aligned_cols=246 Identities=17% Similarity=0.210 Sum_probs=134.8
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
+++|||+|+|+++++++|. +++++.+...++.. ++. +.+.++++++.+ .+.+..+|.++ ++
T Consensus 4 ~~lGiD~Gst~~k~~l~d~---------~g~i~~~~~~~~~~----~~~---~~~~~~l~~l~~-~~~~~~~i~~i--~~ 64 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKD---------GKEIVAKSLVAVGT----GTS---GPARSISEVLEN-AHMKKEDMAFT--LA 64 (270)
T ss_dssp EEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCS----SCC---HHHHHHHHHHHH-HTCCGGGCSEE--EE
T ss_pred EEEEEEeccceEEEEEEeC---------CCCEEEEEEecCCC----CHH---HHHHHHHHHHHH-cCCChhHEEEE--EE
Confidence 8999999999999999998 89999987654431 222 344455555544 34455567655 45
Q ss_pred cCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhccc--CCCCCeEEEEeCccceeeeecCCCCeEEeccCCCCcCC
Q 019144 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGD 180 (345)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~--~g~~~~v~v~~GTG~~g~gi~~dG~~~~~Gg~G~~~gd 180 (345)
+|.-.. + +.. +. .| +.|+..+.+.+.. ....+ .++-+|.+-.-.-.+.+|++... ...+
T Consensus 65 TG~g~~-----~---~~~-~~--~~--~v~Ei~ah~~ga~~~~~~~~-~vidiGGqd~k~i~~~~g~v~~~-----~mn~ 125 (270)
T 1hux_A 65 TGYGRN-----S---LEG-IA--DK--QMSELSCHAMGASFIWPNVH-TVIDIGGQDVKVIHVENGTMTNF-----QMND 125 (270)
T ss_dssp ESTTTT-----T---TTT-TC--SE--EECHHHHHHHHHHHHCTTCC-EEEEEETTEEEEEEEETTEEEEE-----EEES
T ss_pred eCcccc-----c---hhh-cC--CC--CcccHHHHHHHHHHhCCCCC-EEEEECCCceEEEEEeCCceeee-----cccc
Confidence 666321 1 111 33 45 4777776654432 23333 44555554333334467765320 0123
Q ss_pred cCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHHh----cch-HHHHHHHHcCCHHH
Q 019144 181 WGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIA----ALV-PVVVSCAEAGDEVA 255 (345)
Q Consensus 181 ~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~-~~v~~~a~~gD~~a 255 (345)
...+ ..| ..++. +...++. +.+++-+...+.+....+. .|+ ..++....++.+.
T Consensus 126 ~ca~-GtG-~~le~-----------------~a~~lg~-~~~el~~la~~~~~p~~~~~~c~vfa~s~v~~l~~~g~~~- 184 (270)
T 1hux_A 126 KCAA-GTG-RFLDV-----------------MANILEV-KVSDLAELGAKSTKRVAISSTCTVFAESEVISQLSKGTDK- 184 (270)
T ss_dssp SCCT-TSH-HHHHH-----------------HHHHHTC-CTTTHHHHHTTCCSCCCCCCCSHHHHHHHHHHHHHTTCCH-
T ss_pred ccch-hhH-HHHHH-----------------HHHHhCC-CHHHHHHHHhhCCCCCCcccccchhHhHHHHHHhhCCCCH-
Confidence 2221 111 12221 1222222 2233333322111000011 111 3456666678776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeC---CCCChHHH
Q 019144 256 NKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIR---PKVEPAVG 332 (345)
Q Consensus 256 ~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~---~~~a~~~G 332 (345)
.++++...+.++..+..++...++ ++.|++.||+.. ++.| .+.+.+.+.. ++.. ++.++++|
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~-------~~~i~~~GG~a~-n~~~--~~~~~~~lg~-----~v~~p~~~~~~~AlG 249 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI-------VKDVVMTGGVAQ-NYGV--RGALEEGLGV-----EIKTSPLAQYNGALG 249 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC-------CSSEEEESGGGG-CHHH--HHHHHHHHCS-----CEECCGGGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-------CCeEEEeCcccc-CHHH--HHHHHHHHCC-----CeEeCCCcchHhHHH
Confidence 688888888888888777766653 478999999775 3444 6666666643 2332 24468999
Q ss_pred HHHHHHHhhh
Q 019144 333 AALLAWNSFM 342 (345)
Q Consensus 333 Aa~la~~~~~ 342 (345)
||+++.+...
T Consensus 250 AAl~A~~~~~ 259 (270)
T 1hux_A 250 AALYAYKKAA 259 (270)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhhh
Confidence 9999987654
No 36
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=98.56 E-value=1.9e-07 Score=93.48 Aligned_cols=79 Identities=14% Similarity=0.160 Sum_probs=67.0
Q ss_pred ccCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCC
Q 019144 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGS 90 (345)
Q Consensus 17 ~~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~ 90 (345)
+++|+.|+||||+|+|++|++++|. +|+++.+...+.. .+.+++++++++.+.+++++++++.+.
T Consensus 1 ~~aM~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~ 71 (501)
T 3g25_A 1 SNAMEKYILSIDQGTTSSRAILFNQ---------KGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDV 71 (501)
T ss_dssp --CCCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTC
T ss_pred CcccccEEEEEEeCccceEEEEEcC---------CCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCC
Confidence 3567779999999999999999999 8999988765442 224579999999999999999999888
Q ss_pred CccccceeEEeecC
Q 019144 91 NRSAVRAVCLAVSG 104 (345)
Q Consensus 91 ~~~~i~~Igig~pG 104 (345)
++.+|.+|||+.++
T Consensus 72 ~~~~I~~Igis~~~ 85 (501)
T 3g25_A 72 RADQIAGIGITNQR 85 (501)
T ss_dssp CGGGEEEEEEEECS
T ss_pred CcccEEEEEEECCc
Confidence 88899999999874
No 37
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.51 E-value=1.7e-07 Score=94.06 Aligned_cols=77 Identities=22% Similarity=0.253 Sum_probs=65.4
Q ss_pred CCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCc
Q 019144 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNR 92 (345)
Q Consensus 19 ~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 92 (345)
+.+.|+||||+|+|++|++++|. +|+++.+...+... +.+++++++++.+.+++++++++.+.++
T Consensus 4 ~~~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~ 74 (508)
T 3ifr_A 4 AQGRQVIGLDIGTTSTIAILVRL---------PDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESD 74 (508)
T ss_dssp ---CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred ccCCEEEEEEecCcceEEEEECC---------CCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCCh
Confidence 33469999999999999999999 89999987665432 2457999999999999999999888877
Q ss_pred cccceeEEeecC
Q 019144 93 SAVRAVCLAVSG 104 (345)
Q Consensus 93 ~~i~~Igig~pG 104 (345)
.+|.+|||+.+|
T Consensus 75 ~~I~~Igis~~~ 86 (508)
T 3ifr_A 75 WRPGGICVTGML 86 (508)
T ss_dssp CCEEEEEEEECS
T ss_pred hheEEEEEECCC
Confidence 889999999999
No 38
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=98.47 E-value=4.4e-07 Score=91.29 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=66.1
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 93 (345)
|..|+||||+|+|++|++++|. +|+++.+...+.. .+.+++++++++.+.+++++++++.+.++.
T Consensus 24 M~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~ 94 (520)
T 4e1j_A 24 MGGYILAIDQGTTSTRAIVFDG---------NQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITAN 94 (520)
T ss_dssp CSCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGG
T ss_pred hhCeEEEEEeCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4569999999999999999999 8999998655432 224579999999999999999999888888
Q ss_pred ccceeEEeecC
Q 019144 94 AVRAVCLAVSG 104 (345)
Q Consensus 94 ~i~~Igig~pG 104 (345)
+|.+|||+.+|
T Consensus 95 ~I~~Igis~~g 105 (520)
T 4e1j_A 95 DIAAIGITNQR 105 (520)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEeCCc
Confidence 99999999998
No 39
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.44 E-value=5e-05 Score=69.13 Aligned_cols=133 Identities=18% Similarity=0.066 Sum_probs=85.3
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCc---cccCHHHHHHHHHHHHHHHHHHcCCCcccccee
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH---NSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~I 98 (345)
.+++|||+|++++|++++|. +++++.....+.... .-.+.+...+.+..+++.+....+.. +..+
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~---------~~~~l~~~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~---~~~~ 95 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQ---------EGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSE---LFQA 95 (272)
T ss_dssp CCEEEEECCSSEEEEEEECT---------TCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSC---CCEE
T ss_pred CEEEEEEcccceEEEEEECC---------CCcEEEEEeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCc---cCeE
Confidence 48999999999999999987 778887765433211 11234666666666666666555543 3445
Q ss_pred EEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCCCeEEEEeCccceeeeecCCCCeEE
Q 019144 99 CLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (345)
Q Consensus 99 gig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~~~v~v~~GTG~~g~gi~~dG~~~~ 170 (345)
.+++|..........+.. ..+.++. ....+.++..+++.+. +..+.+++=+|.|+.-..++.+|++..
T Consensus 96 v~tvp~~~~~~~~~~~~~-~~~~~g~-~~~~i~~e~~A~a~~~--~~~~~~viDiGggst~~~~~~~g~~~~ 163 (272)
T 3h1q_A 96 ATAIPPGTVGRNAEACGH-VVAGAGL-ELVTLVDEPVAAARAL--GINDGIVVDIGGGTTGIAVIEKGKITA 163 (272)
T ss_dssp EEECCSCC---CTTHHHH-HHHHTTC-EEEEEECHHHHHHHHH--TCSSEEEEEECSSCEEEEEEETTEEEE
T ss_pred EEEcCCCCCHHHHHHHHH-HHHHcCC-eeeecccHHHHHHHHH--cCCCEEEEEECCCcEEEEEEECCEEEE
Confidence 677787554333333433 4455663 4578899998887642 335677888888876666677787764
No 40
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=98.42 E-value=6.7e-07 Score=89.35 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=65.8
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRS 93 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 93 (345)
|+.|+||||+|+|++|++++|. +|+++.+...+.+. +.+++++++++.+.+++++++++.+..+.
T Consensus 1 M~~~~lgiDiGtt~~k~~l~d~---------~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~ 71 (497)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIFDR---------ESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPN 71 (497)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred CCcEEEEEecCCchhEEEEECC---------CCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4568999999999999999999 89999887665432 23568999999999999999998888778
Q ss_pred ccceeEEeecC
Q 019144 94 AVRAVCLAVSG 104 (345)
Q Consensus 94 ~i~~Igig~pG 104 (345)
+|.+|||+.+|
T Consensus 72 ~i~~Igis~~~ 82 (497)
T 2zf5_O 72 QIAAIGVTNQR 82 (497)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEecCC
Confidence 89999999998
No 41
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=98.38 E-value=4.8e-05 Score=73.12 Aligned_cols=66 Identities=18% Similarity=0.113 Sum_probs=55.0
Q ss_pred chHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHH
Q 019144 240 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCIL 314 (345)
Q Consensus 240 ~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~ 314 (345)
..++|++++++||+.|+.+++.++..+++.|.++...|. +|+.||++||+.++.+.+ ++.+.+.+.
T Consensus 284 D~R~i~~~a~~Gd~~A~la~d~f~yriak~Iga~aa~LG-------~vDaIVfTGGIgEns~~v--r~~I~~~l~ 349 (398)
T 4ijn_A 284 DFRKLRELIESGDEHAKLAYDVYIHRLRKYIGAYMAVLG-------RTDVISFTAGVGENVPPV--RRDALAGLG 349 (398)
T ss_dssp SHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHS-------SCCEEEEEHHHHHHCHHH--HHHHHTTCG
T ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCcEEEECCccccccHHH--HHHHHHHHh
Confidence 457889999999999999999999999999999999993 269999999999765433 666655553
No 42
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.38 E-value=9.9e-07 Score=88.46 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=65.1
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.|+||||+|+|++|++++|. +|+++.+...+.. .+.+++++++++.+.+++++++++.+.++.+|
T Consensus 3 ~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I 73 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQI 73 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred cEEEEEEcCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhe
Confidence 49999999999999999999 8999988765432 12457999999999999999999998888899
Q ss_pred ceeEEeecC
Q 019144 96 RAVCLAVSG 104 (345)
Q Consensus 96 ~~Igig~pG 104 (345)
.+|||+.+|
T Consensus 74 ~~Igis~~~ 82 (510)
T 2p3r_A 74 AAIGITNQR 82 (510)
T ss_dssp EEEEEEECS
T ss_pred EEEEEeCCc
Confidence 999999997
No 43
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=98.36 E-value=7.9e-07 Score=88.96 Aligned_cols=76 Identities=12% Similarity=0.115 Sum_probs=63.7
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHc--CCC
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKS--GSN 91 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~~--~~~ 91 (345)
|+.|+||||+|+|++|++++|. +|+++.+...+... +.+++++++++.+.+++++++++. +..
T Consensus 2 ~m~~~lgIDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~ 72 (503)
T 2w40_A 2 SMNVILSIDQSTQSTKVFFYDE---------ELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYT 72 (503)
T ss_dssp -CEEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CccEEEEEEeCCcceEEEEECC---------CCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3468999999999999999999 89999887765432 234689999999999999999876 666
Q ss_pred ccccceeEEeecC
Q 019144 92 RSAVRAVCLAVSG 104 (345)
Q Consensus 92 ~~~i~~Igig~pG 104 (345)
+.+|.+|||+.+|
T Consensus 73 ~~~i~~Igis~~~ 85 (503)
T 2w40_A 73 SVIIKCIGITNQR 85 (503)
T ss_dssp SCEEEEEEEEECS
T ss_pred ccceEEEEEcCCc
Confidence 6679999999996
No 44
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.31 E-value=1.7e-06 Score=86.61 Aligned_cols=74 Identities=16% Similarity=0.256 Sum_probs=64.5
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.|+||||+|+|++|++++|. +|+++.+...+.. .+.+++++++++.+.+++++++++.+.++.+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I 75 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDR---------NGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAI 75 (506)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred CEEEEEEcCCCceEEEEECC---------CCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhe
Confidence 59999999999999999999 8999998665432 23457999999999999999999988888899
Q ss_pred ceeEEeecC
Q 019144 96 RAVCLAVSG 104 (345)
Q Consensus 96 ~~Igig~pG 104 (345)
.+|||+.++
T Consensus 76 ~~Igis~~~ 84 (506)
T 3h3n_X 76 AGIGITNQR 84 (506)
T ss_dssp EEEEEEECS
T ss_pred EEEEeeCCc
Confidence 999999876
No 45
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=98.31 E-value=1.6e-06 Score=86.86 Aligned_cols=76 Identities=13% Similarity=0.032 Sum_probs=64.6
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 93 (345)
|+.|+||||+|+|++|++++|. +|+++.+...+.. .+.+++++++++.+.+++++++ +.+.++.
T Consensus 3 mm~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~ 72 (511)
T 3hz6_A 3 LAFYIATFDIGTTEVKAALADR---------DGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDAR 72 (511)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGG
T ss_pred cccEEEEEEeCCCceEEEEECC---------CCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChh
Confidence 4569999999999999999999 8999998765432 2345799999999999999999 7777788
Q ss_pred ccceeEEeecCC
Q 019144 94 AVRAVCLAVSGV 105 (345)
Q Consensus 94 ~i~~Igig~pG~ 105 (345)
+|.+|||+..+.
T Consensus 73 ~I~~Igis~q~~ 84 (511)
T 3hz6_A 73 RVSAIVLSGQMQ 84 (511)
T ss_dssp GEEEEEEEECCS
T ss_pred HeEEEEEecccc
Confidence 899999998763
No 46
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.31 E-value=1.9e-06 Score=86.69 Aligned_cols=74 Identities=16% Similarity=0.196 Sum_probs=64.2
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCC------CCccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC------SNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~------~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.|+||||+|+|++|++++|. +|+++.....+. +.+.+++|+++|+.+.++++++++++++++.+|
T Consensus 4 kYvlgID~GTss~Ka~l~d~---------~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~I 74 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQI 74 (526)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred eEEEEEEccccceeeeEEcC---------CCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhE
Confidence 59999999999999999999 899998765432 234568999999999999999999999999999
Q ss_pred ceeEEeecC
Q 019144 96 RAVCLAVSG 104 (345)
Q Consensus 96 ~~Igig~pG 104 (345)
.+|||...+
T Consensus 75 ~aIgis~q~ 83 (526)
T 3ezw_A 75 AAIGITNQR 83 (526)
T ss_dssp EEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999997665
No 47
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=98.30 E-value=1.7e-06 Score=86.27 Aligned_cols=74 Identities=22% Similarity=0.168 Sum_probs=63.7
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.|+||||+|+|++|++++|. +|+++.+...+... +.+++++++++.+.+++++++++.+..+.+|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL---------EGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEV 72 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred cEEEEEeeCCcceEEEEECC---------CCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 48999999999999999999 89999887665431 2347899999999999999999988777789
Q ss_pred ceeEEeecC
Q 019144 96 RAVCLAVSG 104 (345)
Q Consensus 96 ~~Igig~pG 104 (345)
.+|||+.+|
T Consensus 73 ~~Igis~~~ 81 (495)
T 2dpn_A 73 LALGITNQR 81 (495)
T ss_dssp CEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999996
No 48
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=98.29 E-value=2.2e-06 Score=85.73 Aligned_cols=74 Identities=16% Similarity=0.214 Sum_probs=64.4
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.|+||||+|+|++|++++|. +|+++.+...+.+. +.+++++++++.+.+++++++++.+..+.+|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~---------~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH---------SGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDI 72 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CEEEEEecCCcceEEEEECC---------CCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccE
Confidence 38999999999999999999 89999887665432 2346899999999999999999988777789
Q ss_pred ceeEEeecC
Q 019144 96 RAVCLAVSG 104 (345)
Q Consensus 96 ~~Igig~pG 104 (345)
.+|||+.+|
T Consensus 73 ~~Igis~~g 81 (504)
T 2d4w_A 73 AAVGITNQR 81 (504)
T ss_dssp EEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999998
No 49
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=98.14 E-value=5e-06 Score=84.17 Aligned_cols=72 Identities=14% Similarity=0.196 Sum_probs=62.3
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.|+||||+|+|++|++++|. +|+++.+...+.. .+.+++++++++.+.+++++++++.++.+.+|
T Consensus 5 ~~~lgIDiGtts~ka~l~d~---------~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~I 75 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDL---------QGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQV 75 (554)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred cEEEEEEECcccEEEEEECC---------CCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhHE
Confidence 49999999999999999999 8999998765432 23457999999999999999999988888889
Q ss_pred ceeEEee
Q 019144 96 RAVCLAV 102 (345)
Q Consensus 96 ~~Igig~ 102 (345)
.+|||+.
T Consensus 76 ~~Igis~ 82 (554)
T 3l0q_A 76 KGLGFDA 82 (554)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 9999864
No 50
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=98.11 E-value=0.00084 Score=64.29 Aligned_cols=248 Identities=17% Similarity=0.145 Sum_probs=139.6
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCC---ccccCHHHHHHHHHHHHHHHHHHcCCC--ccccce
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN---HNSVGEDAARETIEKVMADALLKSGSN--RSAVRA 97 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~---~~~~~~~~~~~~l~~~i~~~~~~~~~~--~~~i~~ 97 (345)
.+|.+..|++++|+.++|.. +.+++.+....... ....+-++.++.+.+. +.+.+.. ..+|.+
T Consensus 13 ~iLviN~GSSSlK~~l~~~~--------~~~~l~~G~~e~ig~~~~~~~~h~~a~~~il~~----L~~~~~~~~~~~i~a 80 (391)
T 3r9p_A 13 RVLVINSGSSSLKFQLVDPE--------FGVAASTGIVERIGEESSPVPDHDAALRRAFDM----LAGDGVDLNTAGLVA 80 (391)
T ss_dssp EEEEEEECSSCEEEEEEETT--------TTEEEEEEEECCTTCTTCSCCSHHHHHHHHHHH----HHHTTCCTTTTTEEE
T ss_pred eEEEEecCchhheeEEEecC--------CCceEEEEEEeecCCCccCccCHHHHHHHHHHH----HHhcCCCCcccceeE
Confidence 69999999999999999972 45666665443211 1112334455544443 3444432 356888
Q ss_pred eEE-eecCCC--------ChhHHH---------------HH--HHHHHhhCCCCce-EEEeCcHH-------HHHhc---
Q 019144 98 VCL-AVSGVN--------HPTDQQ---------------RI--LNWLRDIFPGNVR-LYVHNDAL-------AALAS--- 140 (345)
Q Consensus 98 Igi-g~pG~~--------~~~~~~---------------~l--~~~L~~~~~~~~p-V~v~NDa~-------~a~~~--- 140 (345)
||. =++|-. +++-.. .| ....++.||. .| |++-.-+- +-.++
T Consensus 81 VGhRvVhGG~~f~~~~~I~~~vl~~l~~~~~lAPLHnp~nL~gI~a~~~~~P~-~p~VavFDTaFh~tmp~~A~~y~lP~ 159 (391)
T 3r9p_A 81 VGHRVVHGGNTFYRPTVLDDAVIARLHELSELAPLHNPPALQGIEVARRLLPD-IAHVAVFDTGFFHDLPPAAATYAIDR 159 (391)
T ss_dssp EEEEESCCTTTCCSCEECCHHHHHHHHTTGGGSTTTHHHHHHHHHHHHHHCTT-SEEEEEETTGGGTTCCHHHHCCSSCH
T ss_pred EecCCCCCCCCCCCCEECcHHHHHHHHhcCcCCcccCHHHHHHHHHHHHHCCC-CCEEEEECChhhccccHHHHHcCCCH
Confidence 765 245532 222110 11 2335667763 77 44443221 11110
Q ss_pred --------------------------ccCC----CCCeEEEEeCccceeeeecCCCCeEE-ec----cCCCCcCCcCcHH
Q 019144 141 --------------------------GTMG----KLHGCVLIAGTGTIAYGFTEDGRDAR-AA----GAGPILGDWGSGY 185 (345)
Q Consensus 141 --------------------------~~~g----~~~~v~v~~GTG~~g~gi~~dG~~~~-~G----g~G~~~gd~G~a~ 185 (345)
+..+ +-+.+++.+|.|...++ +.+|+.+- .- .-|-+.+.-
T Consensus 160 e~~~~~giRryGFHGlS~~yva~r~a~~lgk~~~~~~lIv~HLGnGaSv~A-i~~GksvDtsmG~tpleGl~mgtR---- 234 (391)
T 3r9p_A 160 ELADRWQIRRYGFHGTSHRYVSEQAAAFLDRPLRGLKQIVLHLGNGCSASA-IAGTRPLDTSMGLTPLEGLVMGTR---- 234 (391)
T ss_dssp HHHHHTTCSCCCSCHHHHHHHHHHHHHHTTSCGGGCEEEEEEESSSEEEEE-EETTEEEEESCCSSTTSSSCCSSC----
T ss_pred HHHHhcCceEeceeHHhHHHHHHHHHHHhCCChHHcCEEEEEeCCCcEeEE-EECCEEEeeCCCCCcccCCCCCCC----
Confidence 0112 13578888999985554 58999874 21 223333311
Q ss_pred HHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhhcCCChHHH--hcchHHHHHHHHcCCHHHHHHHHHHH
Q 019144 186 GIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARI--AALVPVVVSCAEAGDEVANKILQDSV 263 (345)
Q Consensus 186 ~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~v~~~a~~gD~~a~~il~~~~ 263 (345)
.|..++ ...-.+....+. +.+++.+.++++.-.-.+ ....++|.+++++||+.|+.+++-++
T Consensus 235 --------------sGdiDp-~~l~~l~~~~g~-s~~ei~~~Lnk~SGLlglsG~~D~R~v~~~~~~gd~~A~lA~d~f~ 298 (391)
T 3r9p_A 235 --------------SGDIDP-SIVSYLCHTAGM-GVDDVESMLNHRSGVVGLSGVRDFRRLRELIESGDGAAQLAYSVFT 298 (391)
T ss_dssp --------------CCSCCT-HHHHHHHHHSCC-CHHHHHHHHHHSCHHHHHHSCSCSHHHHHHHHTTCHHHHHHHHHHH
T ss_pred --------------CCCCCh-HHHHHHHHhcCC-CHHHHHHHHHhccCceeecCCCCHHHHHHHHHCCCHHHHHHHHHHH
Confidence 111111 111112222221 345555555432200001 03457888899999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHH
Q 019144 264 EELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCI 313 (345)
Q Consensus 264 ~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l 313 (345)
..+++.|.++...|.- ++.||++||+.++...+ ++.+.+.+
T Consensus 299 yri~k~Iga~aa~Lg~-------vDaIVfTGGIgens~~v--R~~i~~~l 339 (391)
T 3r9p_A 299 HRLRKYIGAYLAVLGH-------TDVISFTAGIGENDAAV--RRDAVSGM 339 (391)
T ss_dssp HHHHHHHHHHHHHHSS-------CCEEEEEHHHHHHCHHH--HHHHHTTC
T ss_pred HHHHHHHHHHHHHhCC-------CCEEEECcccccCCHHH--HHHHHHHH
Confidence 9999999999999952 68999999999865443 66665555
No 51
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=98.07 E-value=7.9e-06 Score=81.24 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=59.6
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~ 96 (345)
++||||+|+|++|++++|. +|+++.+...+.. .+.+++++++++.+.+++++++++.. +.+|.
T Consensus 1 ~~lgiDiGtt~~k~~l~d~---------~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~--~~~i~ 69 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNE---------QGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS--LQDVK 69 (484)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC--CTTCC
T ss_pred CEEEEEecCcccEEEEECC---------CCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC--ccceE
Confidence 4799999999999999999 8999998765432 12347899999999999999988753 45799
Q ss_pred eeEEeecC
Q 019144 97 AVCLAVSG 104 (345)
Q Consensus 97 ~Igig~pG 104 (345)
+|||+.+|
T Consensus 70 ~Igis~~~ 77 (484)
T 2itm_A 70 ALGIAGQM 77 (484)
T ss_dssp EEEEEECS
T ss_pred EEEEcCCc
Confidence 99999999
No 52
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=98.06 E-value=1.1e-05 Score=80.60 Aligned_cols=72 Identities=17% Similarity=0.233 Sum_probs=61.2
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.|+||||+|+|++|++++|. +|+++.+...+.+ .+.+++++++++.+.+++++++++.+ .+|
T Consensus 4 ~~~lgIDiGtts~K~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~I 71 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI---------NGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKI 71 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SEE
T ss_pred CEEEEEEecCCceEEEEEcC---------CCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CCe
Confidence 59999999999999999999 8999998766432 23457899999999999999998765 579
Q ss_pred ceeEEeecCC
Q 019144 96 RAVCLAVSGV 105 (345)
Q Consensus 96 ~~Igig~pG~ 105 (345)
.+|||+..+.
T Consensus 72 ~~Igis~q~~ 81 (504)
T 3ll3_A 72 AAISWSSQMH 81 (504)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEECCCC
Confidence 9999988764
No 53
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=98.01 E-value=9.8e-06 Score=82.31 Aligned_cols=75 Identities=15% Similarity=0.137 Sum_probs=60.9
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC-----------------CccccCHHHHHHHHHHHHHHH
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-----------------NHNSVGEDAARETIEKVMADA 84 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~i~~~ 84 (345)
.|+||||+|+|++|++++|.. +|+++.+...+.+ .+.+++++++++.+.++++++
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~--------~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~ 76 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLS--------NGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAV 76 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETT--------TCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHH
T ss_pred CEEEEEecCCcceEEEEEECC--------CCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHH
Confidence 499999999999999999962 6899988765432 224679999999999999999
Q ss_pred HHHcCCCccccceeEEeecC
Q 019144 85 LLKSGSNRSAVRAVCLAVSG 104 (345)
Q Consensus 85 ~~~~~~~~~~i~~Igig~pG 104 (345)
+++++..+.+|.+|||+..+
T Consensus 77 l~~~~~~~~~I~~Igis~q~ 96 (572)
T 3jvp_A 77 MKESGVDADDVIGIGVDFTA 96 (572)
T ss_dssp HHC---CCSCEEEEEEEECS
T ss_pred HHHcCCChhHEEEEEEecCC
Confidence 99988888889999999865
No 54
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=97.97 E-value=9.7e-06 Score=80.72 Aligned_cols=71 Identities=11% Similarity=0.045 Sum_probs=55.5
Q ss_pred CCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC-----CccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 019144 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-----NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (345)
Q Consensus 19 ~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~-----~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 93 (345)
.|+.|+||||+|+|++|++++|. +|+++.+.+.+.. .+.+++++++++.+.+++++++ + .
T Consensus 3 ~mm~~~lgIDiGTts~Ka~l~d~---------~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~-----~ 67 (482)
T 3h6e_A 3 LSTGATIVIDLGKTLSKVSLWDL---------DGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D-----H 67 (482)
T ss_dssp -----CEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T-----S
T ss_pred hhhceEEEEEcCCCCeEEEEEEC---------CCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h-----c
Confidence 35679999999999999999998 8999988766543 2235789999999999999886 2 4
Q ss_pred ccceeEEeecC
Q 019144 94 AVRAVCLAVSG 104 (345)
Q Consensus 94 ~i~~Igig~pG 104 (345)
+|.+|||+.++
T Consensus 68 ~I~aIgis~~~ 78 (482)
T 3h6e_A 68 PVTTIVPVGHG 78 (482)
T ss_dssp CCCEEEEEECS
T ss_pred CCCEEEEecCc
Confidence 68999999887
No 55
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=97.94 E-value=7e-05 Score=68.07 Aligned_cols=127 Identities=18% Similarity=0.132 Sum_probs=81.1
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
..++|.+|+|.|+++++++|- ++++.+.+.++... .+.+++...+.+.++. ...++.+++|
T Consensus 2 ~~M~L~IDIGNT~ik~gl~~~----------~~l~~~~r~~T~~~--~t~de~~~~l~~l~~~-------~~~~i~~i~I 62 (249)
T 3bex_A 2 DPMYLLVDVGNTHSVFSITED----------GKTFRRWRLSTGVF--QTEDELFSHLHPLLGD-------AMREIKGIGV 62 (249)
T ss_dssp CCEEEEEEECSSEEEEEEESS----------SSSCEEEEEECCTT--CCHHHHHHHHHHHHGG-------GGGGEEEEEE
T ss_pred CceEEEEEECCCeEEEEEEEC----------CEEEEEEEecCCCC--CCHHHHHHHHHHHHhh-------ccccCCEEEE
Confidence 346899999999999999984 56776666544322 4677777766655543 2246888889
Q ss_pred eecCCCChhHHHHHHHHHHhhCCC----------CceEEEeC------cHHHHHhcccC-CCCCeEEEEeCccceeeeec
Q 019144 101 AVSGVNHPTDQQRILNWLRDIFPG----------NVRLYVHN------DALAALASGTM-GKLHGCVLIAGTGTIAYGFT 163 (345)
Q Consensus 101 g~pG~~~~~~~~~l~~~L~~~~~~----------~~pV~v~N------Da~~a~~~~~~-g~~~~v~v~~GTG~~g~gi~ 163 (345)
+.+++ .....+...+++.|+. +.++..+| |-.+++++++. -..+.++|-+||.+..-.+
T Consensus 63 sSVvp---~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~~~~~iVvD~GTA~T~d~v- 138 (249)
T 3bex_A 63 ASVVP---TQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVKEYGKNGIIIDMGTATTVDLV- 138 (249)
T ss_dssp EESCH---HHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHHHTCSCEEEEEESSEEEEEEE-
T ss_pred EcCcH---HHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHHHcCCCEEEEEcCCceEEEEE-
Confidence 88863 3333455566655531 13344455 54455555431 1347899999999855544
Q ss_pred CCCCeEE
Q 019144 164 EDGRDAR 170 (345)
Q Consensus 164 ~dG~~~~ 170 (345)
.+|+...
T Consensus 139 ~~g~~lG 145 (249)
T 3bex_A 139 VNGSYEG 145 (249)
T ss_dssp ETTEEEE
T ss_pred eCCeEee
Confidence 7787653
No 56
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=97.92 E-value=0.00019 Score=65.81 Aligned_cols=126 Identities=13% Similarity=0.077 Sum_probs=82.9
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
++|+||+|.|+|+++++|. ++++.+.+.++. . .+.|++.. .+.++++..+.+..+|.+++|+.
T Consensus 3 MlL~IDIGNT~iK~gl~d~----------~~l~~~~r~~T~-~--~t~de~~~----~l~~ll~~~~~~~~~I~~iiISS 65 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG----------DEIKLRFRHTSK-V--STSDELGI----FLKSVLRENNCSPETIRKIAICS 65 (266)
T ss_dssp CEEEEEECSSEEEEEEEET----------TEEEEEEEEECS-C--CCHHHHHH----HHHHHHHTTTCCGGGCCEEEEEE
T ss_pred eEEEEEECCCeEEEEEEEC----------CEEEEEEEecCC-C--CCHHHHHH----HHHHHHHHcCCChhhceEEEEec
Confidence 6899999999999999985 588777776554 2 46676544 45566777777777899999999
Q ss_pred cCCCChhHHHHHHHHHHhhCCCCceEEEe------------C------cHHHHHhccc--CCCCCeEEEEeCccceeeee
Q 019144 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVH------------N------DALAALASGT--MGKLHGCVLIAGTGTIAYGF 162 (345)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~pV~v~------------N------Da~~a~~~~~--~g~~~~v~v~~GTG~~g~gi 162 (345)
+++. ....++..+++.|+. .|+++. | |--+++++++ .+..+.++|-+||=+---.+
T Consensus 66 Vvp~---~~~~l~~~~~~~~~~-~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~~~~~~iVVD~GTA~T~d~v 141 (266)
T 3djc_A 66 VVPQ---VDYSLRSACVKYFSI-DPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSFPNQNIIVIDFGTATTFCAI 141 (266)
T ss_dssp SCHH---HHHHHHHHHHHHTCC-CCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHSTTSEEEEEEESSEEEEEEE
T ss_pred chHh---HHHHHHHHHHHHcCC-CeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhcCCCCEEEEECCCeeEEEEE
Confidence 9853 334567777777752 233322 2 2223333332 23346888889998754445
Q ss_pred cCCCCeE
Q 019144 163 TEDGRDA 169 (345)
Q Consensus 163 ~~dG~~~ 169 (345)
..+|+..
T Consensus 142 ~~~g~~l 148 (266)
T 3djc_A 142 SHKKAYL 148 (266)
T ss_dssp CTTSEEE
T ss_pred cCCCcEE
Confidence 5566654
No 57
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.90 E-value=0.01 Score=55.75 Aligned_cols=107 Identities=12% Similarity=0.136 Sum_probs=69.1
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCc-cccCHH----HHHHHHHHHHHHHHHHcCCCccccce
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH-NSVGED----AARETIEKVMADALLKSGSNRSAVRA 97 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~-~~~~~~----~~~~~l~~~i~~~~~~~~~~~~~i~~ 97 (345)
++||||.+.+.+.+++++. ++++.......... ....|+ .-.+.+...+++++++++++..+|.+
T Consensus 2 ~iLgIdts~~~~~val~~~----------g~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~ 71 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE----------DKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDV 71 (330)
T ss_dssp CEEEEECSSSEEEEEEECS----------SCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCE
T ss_pred EEEEEEccCCCeEEEEEEC----------CEEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 6899999999999999985 57776543311100 011233 23456777899999999999889998
Q ss_pred eEEe-ecCCCCh-hHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcc
Q 019144 98 VCLA-VSGVNHP-TDQQRILNWLRDIFPGNVRLYVHNDALAALASG 141 (345)
Q Consensus 98 Igig-~pG~~~~-~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~ 141 (345)
|+++ =||.... .....+.+.|...++ .|+.--|.-.+-+++.
T Consensus 72 Ia~~~GPG~~~~lrvg~~~ak~la~~~~--~pl~~v~h~~aHa~~a 115 (330)
T 2ivn_A 72 IAFSQGPGLGPALRVVATAARALAVKYR--KPIVGVNHCIAHVEIT 115 (330)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTT--CCEEEEEHHHHHHHGG
T ss_pred EEEECCCCchHHHHHHHHHHHHHHHHcC--CCEEeeCcHHHHHHHH
Confidence 8774 3443210 112355667777776 7877766655444433
No 58
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=97.82 E-value=4.7e-05 Score=76.36 Aligned_cols=69 Identities=16% Similarity=0.133 Sum_probs=57.9
Q ss_pred cEEEEEecCccceeeEEEc-CccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 22 EVILGLDGGTTSTVCICMP-VISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
.|+||||+|+|++|++++| . +|+++.+...+.+.+.+++++++++.+.+++++ .+. ..+|.+|||
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~---------~G~i~~~~~~~~~g~~e~d~~~~~~~i~~~l~~----~~~-~~~I~~Igi 70 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAE---------TGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQ----AGG-LDDVSALAV 70 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEECCSSSEECTHHHHHHHHHHHHH----TTC-STTEEEEEE
T ss_pred cEEEEEEeccccEEEEEEECC---------CCeEEEEEEEeCCCCceECHHHHHHHHHHHHHh----cCC-ccCceEEEE
Confidence 4999999999999999999 7 899999888766555668999999988777765 343 467999999
Q ss_pred eecC
Q 019144 101 AVSG 104 (345)
Q Consensus 101 g~pG 104 (345)
+..+
T Consensus 71 s~q~ 74 (515)
T 3i8b_A 71 GGQQ 74 (515)
T ss_dssp EECS
T ss_pred eCCc
Confidence 9988
No 59
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=97.66 E-value=4.4e-05 Score=75.86 Aligned_cols=68 Identities=9% Similarity=0.015 Sum_probs=51.9
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecC----------CCCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG----------CSNHNSVGEDAARETIEKVMADALLKSGSN 91 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~----------~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 91 (345)
.++||||+|+|++|++++|. +|+++.+...+ ...+.+++++++++.+.++++++...
T Consensus 4 ~~~lgiDiGtts~k~~l~d~---------~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~---- 70 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARY---------ERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA---- 70 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEE---------EGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT----
T ss_pred ceEEEEEecCCCceEEEEEe---------cCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC----
Confidence 47999999999999999998 77776654221 11122468999999999999987652
Q ss_pred ccccceeEEee
Q 019144 92 RSAVRAVCLAV 102 (345)
Q Consensus 92 ~~~i~~Igig~ 102 (345)
..+|.+|||+.
T Consensus 71 ~~~i~~Igis~ 81 (489)
T 2uyt_A 71 GIAIDSIGIDT 81 (489)
T ss_dssp TCCCCEEEEEE
T ss_pred CCCceEEEEec
Confidence 24689999998
No 60
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=97.61 E-value=8.8e-05 Score=74.73 Aligned_cols=78 Identities=15% Similarity=0.084 Sum_probs=55.5
Q ss_pred ccCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC----------Cc-------cccCHHHHHHHHHH
Q 019144 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS----------NH-------NSVGEDAARETIEK 79 (345)
Q Consensus 17 ~~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~----------~~-------~~~~~~~~~~~l~~ 79 (345)
+.+| .|+||||+|+|++|++++|. +|+++.+...+.. .+ .+++|++.|.....
T Consensus 6 ~~~~-~~~lgID~GTts~Ka~l~d~---------~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~ 75 (538)
T 4bc3_A 6 HAPR-RCCLGWDFSTQQVKVVAVDA---------ELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALD 75 (538)
T ss_dssp ---C-CEEEEEEECSSEEEEEEEET---------TCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHH
T ss_pred CCCC-CEEEEEEEcCcCEEEEEECC---------CCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHH
Confidence 3444 59999999999999999999 8999998765421 11 12456655554555
Q ss_pred HHHHHHHHcCCCccccceeEEeecC
Q 019144 80 VMADALLKSGSNRSAVRAVCLAVSG 104 (345)
Q Consensus 80 ~i~~~~~~~~~~~~~i~~Igig~pG 104 (345)
.+.+.+.++++++.+|.+|||+..+
T Consensus 76 ~~~~~l~~~~~~~~~I~aIgis~q~ 100 (538)
T 4bc3_A 76 IILEKMKASGFDFSQVLALSGAGQQ 100 (538)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEECS
T ss_pred HHHHHHHHcCCChHHeEEEEecccc
Confidence 5555667778888899999987654
No 61
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.53 E-value=0.0011 Score=61.28 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCC---CCChH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRP---KVEPA 330 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~---~~a~~ 330 (345)
.|..+++-.++.++..........+. +.|++.||.+...+. +.+.+.+.+... +.++..+ ++.++
T Consensus 212 Iaasl~~sV~~~I~~la~~~a~~~~i--------~~Vvf~Gg~l~~n~~--l~~~l~~~~~~~--~~~~~~p~~~~~~gA 279 (287)
T 2ews_A 212 KLAAVIGVVGEVVTTMAITVAREFKT--------ENIVYIGSSFHNNAL--LRKVVEDYTVLR--GCKPYYVENGAFSGA 279 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC--------CEEEEESGGGTTCHH--HHHHHHHHHHHT--TCEEEECTTGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--------CeEEEeCCchhcCHH--HHHHHHHHHhhC--CceEEECCCccHHHH
Confidence 34455555444444443333445664 579999995444443 366666654432 3455443 56789
Q ss_pred HHHHHH
Q 019144 331 VGAALL 336 (345)
Q Consensus 331 ~GAa~l 336 (345)
+|||++
T Consensus 280 lGAaL~ 285 (287)
T 2ews_A 280 IGALYL 285 (287)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999875
No 62
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=97.40 E-value=0.07 Score=51.52 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=63.2
Q ss_pred ChhhHHHHhhcCCC---hHHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCc
Q 019144 220 SPDELIGWTYVDPS---WARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGV 296 (345)
Q Consensus 220 ~~~~l~~~~~~~~~---~~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl 296 (345)
+.+++.+.++++.- .+.+....++|.+++.+||+.|+.+++-++..+.+.|..+...|.- .+.||+.||+
T Consensus 268 s~~ev~~~Lnk~SGLlGlsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~aa~Lgg-------vDaIVFTgGI 340 (415)
T 2e1z_A 268 TLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHR-------LDGIIFTGGI 340 (415)
T ss_dssp CHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCSS-------CCEEEEEHHH
T ss_pred CHHHHHHHHhhccCcEEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCEEEECccc
Confidence 45556555553221 0111234577888888999999999999999999999999999873 5899999999
Q ss_pred ccCcccccchHHHHHHHH
Q 019144 297 LEANRRWDIGREVVKCIL 314 (345)
Q Consensus 297 ~~~~~~~~l~~~~~~~l~ 314 (345)
.++.+.+ ++.+.+.|.
T Consensus 341 GEns~~v--R~~i~~~l~ 356 (415)
T 2e1z_A 341 GENSVLI--RQLVIEHLG 356 (415)
T ss_dssp HHHCHHH--HHHHHHTTG
T ss_pred cccCHHH--HHHHHhhHh
Confidence 9876653 667766664
No 63
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.39 E-value=0.035 Score=52.73 Aligned_cols=90 Identities=17% Similarity=0.040 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHHHHHHHc-CCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcc-c-CCC
Q 019144 69 GEDAARETIEKVMADALLKS-GSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-T-MGK 145 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~~-~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~-~-~g~ 145 (345)
.++++...+.+.+.+..++. + ..+..+.+++|-..+......+++..+ ..++ ..+.+.|+..+++++- . ...
T Consensus 129 ~~~ei~a~~l~~l~~~a~~~~~---~~~~~~vitvP~~~~~~~r~~~~~a~~-~aGl-~~~~li~Ep~Aaa~~~~~~~~~ 203 (394)
T 3qfu_A 129 TPEEISGMILGKMKQIAEDYLG---TKVTHAVVTVPAYFNDAQRQATKDAGT-IAGL-NVLRIVNEPTAAAIAYGLDKSD 203 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---SCCCEEEEEECTTCCHHHHHHHHHHHH-HTTC-EEEEEEEHHHHHHHHTTTTSCS
T ss_pred cHHHHHHHHHHHHHHHHHHhcC---CCcceEEEEECCCCCHHHHHHHHHHHH-HcCC-ceEEEecCHHHHHHHHhhccCC
Confidence 45666555555554444332 3 245678899999887766666666663 3453 5689999999887753 1 121
Q ss_pred -C-CeEEEEeCccceeeeec
Q 019144 146 -L-HGCVLIAGTGTIAYGFT 163 (345)
Q Consensus 146 -~-~~v~v~~GTG~~g~gi~ 163 (345)
. ..+++=+|.|..-..++
T Consensus 204 ~~~~vlV~D~Gggt~dvsv~ 223 (394)
T 3qfu_A 204 KEHQIIVYDLGGGTFDVSLL 223 (394)
T ss_dssp SCEEEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEcCCCceeEEEE
Confidence 1 23555577776544443
No 64
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=97.15 E-value=0.1 Score=49.93 Aligned_cols=89 Identities=9% Similarity=-0.049 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccC----
Q 019144 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---- 143 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~---- 143 (345)
.++++...+.+.+.+..++ .+. .+..+.+++|-..+......+++..+.. ++ ..+.+.|+..+++++-..
T Consensus 126 ~~~ev~~~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~~~~r~~~~~a~~~A-Gl-~~~~li~Ep~AAa~~~~~~~~~ 200 (409)
T 4gni_A 126 TVSEIATRYLRRLVGAASEYLGK---KVTSAVITIPTNFTEKQKAALIAAAAAA-DL-EVLQLISEPAAAVLAYDARPEA 200 (409)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHTTC----
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHHHHc-CC-CeEEEEcCHHHHHHHHhccccc
Confidence 3555554444444333332 232 4567889999988766666677666554 32 578999999988775221
Q ss_pred -CCC-CeEEEEeCccceeeee
Q 019144 144 -GKL-HGCVLIAGTGTIAYGF 162 (345)
Q Consensus 144 -g~~-~~v~v~~GTG~~g~gi 162 (345)
... ..+++=+|.|..-..+
T Consensus 201 ~~~~~~vlv~D~GgGT~dvsv 221 (409)
T 4gni_A 201 TISDKIIVVADLGGSRSDVTV 221 (409)
T ss_dssp --CCEEEEEEEECSSCEEEEE
T ss_pred CCCCCEEEEEECCCCceEEEE
Confidence 112 2445557777654444
No 65
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=97.10 E-value=0.0096 Score=54.47 Aligned_cols=125 Identities=18% Similarity=0.117 Sum_probs=81.1
Q ss_pred EEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEeec
Q 019144 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (345)
Q Consensus 24 ~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~p 103 (345)
+|.+|+|.|+++++++|- ++++...+..+... ...+++...+ .++++..++++.+|.++.++.+
T Consensus 2 lL~IDIGNT~ik~gl~~~----------~~l~~~~r~~T~~~--~t~de~~~~l----~~ll~~~~~~~~~i~~iiISSV 65 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE----------GELRQHWRMETDRH--KTEDEYGMLV----KQLLEHEGLSFEDVKGIIVSSV 65 (268)
T ss_dssp EEEEEECSSEEEEEEEET----------TEEEEEEEEECCTT--CCHHHHHHHH----HHHHHHTTCCGGGCCEEEEEES
T ss_pred EEEEEECcCcEEEEEEEC----------CEEEEEEEecCCCc--CCHHHHHHHH----HHHHHHcCCCcccCcEEEEEcc
Confidence 689999999999999984 57777666544322 4566655544 4566667777778888888776
Q ss_pred CCCChhHHHHHHHHHHhhCCCCceEEE------------eCcH------HHHHhccc--CCCCCeEEEEeCccceeeeec
Q 019144 104 GVNHPTDQQRILNWLRDIFPGNVRLYV------------HNDA------LAALASGT--MGKLHGCVLIAGTGTIAYGFT 163 (345)
Q Consensus 104 G~~~~~~~~~l~~~L~~~~~~~~pV~v------------~NDa------~~a~~~~~--~g~~~~v~v~~GTG~~g~gi~ 163 (345)
. |.....+...+++.|+. .|+++ +|-. -+++++++ .+ .+.++|-.||=+---.+.
T Consensus 66 v---p~~~~~l~~~~~~~~~~-~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~~-~~~iVVD~GTAtT~d~v~ 140 (268)
T 2h3g_X 66 V---PPIMFALERMCEKYFKI-KPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLYG-SPLIIVDFGTATTYCYIN 140 (268)
T ss_dssp C---HHHHHHHHHHHHHHTCC-CCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHHHC-SSEEEEEESSEEEEEEEC
T ss_pred C---hhHHHHHHHHHHHHhCC-CeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHhcC-CCEEEEECCCceEEEEEC
Confidence 3 44445678888888752 34333 2211 12233332 23 578899999997555555
Q ss_pred CCCCeE
Q 019144 164 EDGRDA 169 (345)
Q Consensus 164 ~dG~~~ 169 (345)
.+|+..
T Consensus 141 ~~g~~l 146 (268)
T 2h3g_X 141 EEKHYM 146 (268)
T ss_dssp TTSEEE
T ss_pred CCCcEE
Confidence 667665
No 66
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.98 E-value=0.26 Score=46.82 Aligned_cols=90 Identities=13% Similarity=0.020 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHHHHHHHc-CCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhccc--CC-
Q 019144 69 GEDAARETIEKVMADALLKS-GSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MG- 144 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~~-~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~--~g- 144 (345)
.++++...+.+.+.+..++. +. .+..+.|++|-..+......+++..+.. ++ ..+.+.|+..+|+++-. ..
T Consensus 134 ~~~ei~a~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~~~~r~~~~~a~~~A-Gl-~~~~li~Ep~AAa~~~~~~~~~ 208 (404)
T 3i33_A 134 FPEEISSMVLTKMKEIAEAYLGG---KVHSAVITVPAYFNDSQRQATKDAGTIT-GL-NVLRIINEPTAAAIAYGLDKKG 208 (404)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSS---CCCEEEEEECTTCCHHHHHHHHHHHHHH-TC-EEEEEEEHHHHHHHHTTTTSSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhcc---CCCcEEEEECCCCCHHHHHHHHHHHHHc-CC-CeEEEeccHHHHHHHHHhhccc
Confidence 45666655555555544432 22 4567899999888766666666665443 42 57899999998877521 11
Q ss_pred ---C-CCeEEEEeCccceeeeec
Q 019144 145 ---K-LHGCVLIAGTGTIAYGFT 163 (345)
Q Consensus 145 ---~-~~~v~v~~GTG~~g~gi~ 163 (345)
. ...+++=+|.|..-..++
T Consensus 209 ~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 209 CAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp SSSSCCEEEEEEECSSCEEEEEE
T ss_pred ccCCCceEEEEECCCCcEEEEEE
Confidence 1 224556678776555454
No 67
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.94 E-value=0.26 Score=46.19 Aligned_cols=271 Identities=14% Similarity=0.119 Sum_probs=136.8
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC-CccccCHHH----HHHHHHHHHHHHHHHcCCCccccce
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-NHNSVGEDA----ARETIEKVMADALLKSGSNRSAVRA 97 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~-~~~~~~~~~----~~~~l~~~i~~~~~~~~~~~~~i~~ 97 (345)
++||||-....+.+++++. ++++........ .....-|+. -.+.+..+|++++++++++..+|.+
T Consensus 7 ~iLgIdts~~~~svAl~~~----------~~i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~ 76 (334)
T 3eno_A 7 IVLGLEGTAHTISCGIIDE----------SRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDL 76 (334)
T ss_dssp EEEEEECSSSEEEEEEEES----------SCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred eEEEEECCCcCeEEEEEEC----------CEEEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 8999999999999999985 467765432111 111112332 3457788899999999999999999
Q ss_pred eEEeecCCCChhH---HHHHHHHHHhhCCCCceEEEeCcHHHHHhccc--CCCC-CeEEEEeCccceeeeecCCCCeEEe
Q 019144 98 VCLAVSGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGKL-HGCVLIAGTGTIAYGFTEDGRDARA 171 (345)
Q Consensus 98 Igig~pG~~~~~~---~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~--~g~~-~~v~v~~GTG~~g~gi~~dG~~~~~ 171 (345)
|+++. ||-.... +..+.+.|...++ .|+.--|.-.+-+++.+ .+.+ ..++++.|.+. -.....++++..-
T Consensus 77 Iav~~-gPG~~t~lrvg~~~ak~La~~~~--~Pl~~v~hl~aHa~sa~~~s~~~~pl~L~vsGg~t-~l~~~~~~~~~~l 152 (334)
T 3eno_A 77 IGFSM-GPGLAPSLRVTATAARTISVLTG--KPIIGVNHPLGHIEIGRRVTGAIDPVMLYVSGGNT-QVIAHVNGRYRVL 152 (334)
T ss_dssp EEEEC-SSSCHHHHHHHHHHHHHHHHHHT--CCCEEECHHHHHHHHHHHHHTCSSCEEEEESSSCE-EEEEECSSBEEEE
T ss_pred EEEEc-CCCCcchHHHHHHHHHHHhhccC--CCeEEeccHHHHHHHHHhcCCCCCCEEEEEECCCc-EEEEEeCCEEEEe
Confidence 98875 4433222 3455667777776 78665555443222211 1222 24445555443 2222344554432
Q ss_pred ccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHHHHhh--cC--CChHHHhcchHHHHHH
Q 019144 172 AGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTY--VD--PSWARIAALVPVVVSC 247 (345)
Q Consensus 172 Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~--~~~~~~~~~~~~v~~~ 247 (345)
|+ .-| .+.+++- +.+ ...-|.. . +-...++......+. .+ ...+ .. .+.+. +-..+...
T Consensus 153 g~----t~d-~S~G~~f----D~v-A~~LGl~-y-~g~~~le~lA~~g~~-~~-~~~~~~~~~~~sfsg---l~~~v~~~ 215 (334)
T 3eno_A 153 GE----TLD-IGIGNMI----DKF-AREAGIP-F-PGGPEIEKLAMKGTK-LL-DLPYSVKGMDTAFSG---ILTAALQY 215 (334)
T ss_dssp EE----BSS-CCHHHHH----HHH-HTTTTCC-S-CHHHHHHTTGGGCCS-CC-CCCCCEETTEECCHH---HHHHHHHH
T ss_pred cc----CCC-ccHHHHH----HHH-HHHcCCC-C-CCHHHHHHHHhcCCC-CC-CCceeccCceEchHH---HHHHHHHH
Confidence 22 112 2333321 111 1112221 1 101122221110000 00 0000 00 01111 11233344
Q ss_pred HHcCC---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceee-
Q 019144 248 AEAGD---EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI- 323 (345)
Q Consensus 248 a~~gD---~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~- 323 (345)
..++. ..|..+-+..++.|...+..+..... ...|+++||++.+. + |.+.+++.+.... +++.
T Consensus 216 l~~g~~~~diAasfq~~l~~~l~~~~~~a~~~~g--------~~~vvlsGGVa~N~--~-L~~~L~~~l~~~g--~~v~~ 282 (334)
T 3eno_A 216 LKTGQAIEDISYSIQETAFAMLVEVLERALYVSG--------KDEILMAGGVALNR--R-LRDMVTNMAREAG--IRSYL 282 (334)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CSEEEEESSGGGCH--H-HHHHHHHHHHHHT--SEEEC
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCeEEEcCCHHHHH--H-HHHHHHHHHHHcC--CEEEe
Confidence 44443 24444455555555555555555566 37899999999764 2 4778888886551 2222
Q ss_pred -----CCCCChHHHHHHHH
Q 019144 324 -----RPKVEPAVGAALLA 337 (345)
Q Consensus 324 -----~~~~a~~~GAa~la 337 (345)
..+.+.++|++.+.
T Consensus 283 p~~~~~~D~G~~iG~a~~~ 301 (334)
T 3eno_A 283 TDREYCMDNGIMIAQAALL 301 (334)
T ss_dssp CCTTTTSCCTHHHHHHHHH
T ss_pred cCCCCCChHHHHHHHHHHH
Confidence 13566778998654
No 68
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=96.43 E-value=0.012 Score=48.48 Aligned_cols=90 Identities=18% Similarity=0.261 Sum_probs=59.2
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEE--ecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA--AAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~--~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~ 97 (345)
|+..+||+|.|..+|=+++.|. .+.+ +.. ..... +.+..++.|.+.+++. ++..
T Consensus 1 ~~~~iLglD~G~kriGvAvsd~---------~~~~-A~pl~ti~~~-----~~~~~~~~l~~li~e~---------~v~~ 56 (138)
T 1nu0_A 1 MSGTLMAFDFGTKSIGVAVGQR---------ITGT-ARPLPAIKAQ-----DGTPDWNIIERLLKEW---------QPDE 56 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEET---------TTTE-EEEEEEEEEE-----TTEECHHHHHHHHHHH---------CCSE
T ss_pred CCCeEEEEEeCCCEEEEEEEcC---------CCCE-EeeEEEEEcC-----CcchHHHHHHHHHHHc---------CCCE
Confidence 5568999999999999999997 4443 322 11111 1122355666555553 5778
Q ss_pred eEEeec----CCCChhHH--HHHHHHHHhhCCCCceEEEeCcHH
Q 019144 98 VCLAVS----GVNHPTDQ--QRILNWLRDIFPGNVRLYVHNDAL 135 (345)
Q Consensus 98 Igig~p----G~~~~~~~--~~l~~~L~~~~~~~~pV~v~NDa~ 135 (345)
|.||+| |-.++... ..+.+.|+++|+ .||.+-..-.
T Consensus 57 iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~--lpV~~~DERl 98 (138)
T 1nu0_A 57 IIVGLPLNMDGTEQPLTARARKFANRIHGRFG--VEVKLHDERL 98 (138)
T ss_dssp EEEEEEECTTSCBCHHHHHHHHHHHHHHHHHC--CCEEEEEEEC
T ss_pred EEEecccCCCcCcCHHHHHHHHHHHHHHHHhC--CCEEEEcCCc
Confidence 999988 55544332 468888988887 8988766543
No 69
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=96.13 E-value=0.048 Score=52.01 Aligned_cols=139 Identities=19% Similarity=0.197 Sum_probs=85.7
Q ss_pred CCeEEEEeCccceeeeecCCCCeEE-eccC----CCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCC
Q 019144 146 LHGCVLIAGTGTIAYGFTEDGRDAR-AAGA----GPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSS 220 (345)
Q Consensus 146 ~~~v~v~~GTG~~g~gi~~dG~~~~-~Gg~----G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 220 (345)
-+.|+.-+|.|..-+++ .+|+.+- .-|+ |-+.+. ..|-.++..+.. +....+. +
T Consensus 194 ~~~Iv~HLGnGaSv~Ai-~~GksvDtsmG~tPleGl~mgt------------------RsG~iDp~~~~~-l~~~~~~-s 252 (384)
T 3khy_A 194 ANVIVAHLGNGCSITAV-VDGKSIDTSMGLTPLDGLVMGT------------------RSGCIDPSIFAY-ISDNLGW-S 252 (384)
T ss_dssp CCEEEEEESSSEEEEEE-ETTEEEEESCCSSTTSSSCCSS------------------CCCSCCTTHHHH-HHHHHCC-C
T ss_pred cCEEEEEeCCCcEeEEE-ECCEEEEeCCCCCCCCCCCCCC------------------CCCCCChHHHHH-HHHhcCC-C
Confidence 36788889999755544 8899873 2222 111111 111111222222 1111121 3
Q ss_pred hhhHHHHhhcCCChHHH--hcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCccc
Q 019144 221 PDELIGWTYVDPSWARI--AALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLE 298 (345)
Q Consensus 221 ~~~l~~~~~~~~~~~~~--~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~ 298 (345)
.+++.+.++++.-.-.+ ....++|.+++++||+.|+.+++-++..+++.|......|+- .+.||+.||+.+
T Consensus 253 ~~ei~~~Lnk~sGLlg~sGs~D~R~l~~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~g-------vDaIVFTgGIgE 325 (384)
T 3khy_A 253 VTEITNMLNKQSGLLGICGHNDMREVSQLAAKGDSLAKLAIEIFSHRVAKFVASYMIYFNK-------LDALVFTGGIGE 325 (384)
T ss_dssp HHHHHHHHHHSCHHHHHHSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGCSS-------CCEEEEEHHHHH
T ss_pred HHHHHHHHhcccceEEecCCCcHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCEEEECCcccc
Confidence 45555555432200001 123567888889999999999999999999999999988863 689999999997
Q ss_pred CcccccchHHHHHHHH
Q 019144 299 ANRRWDIGREVVKCIL 314 (345)
Q Consensus 299 ~~~~~~l~~~~~~~l~ 314 (345)
+...+ ++.+.+.+.
T Consensus 326 ns~~i--R~~i~~~l~ 339 (384)
T 3khy_A 326 NAANI--RKNIISKLA 339 (384)
T ss_dssp HCHHH--HHHHHHHTG
T ss_pred CcHHH--HHHHHhhcc
Confidence 76543 666666654
No 70
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=96.03 E-value=0.059 Score=51.86 Aligned_cols=137 Identities=17% Similarity=0.152 Sum_probs=86.6
Q ss_pred CeEEEEeCccceeeeecCCCCeEE-eccCCC----CcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCCh
Q 019144 147 HGCVLIAGTGTIAYGFTEDGRDAR-AAGAGP----ILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSP 221 (345)
Q Consensus 147 ~~v~v~~GTG~~g~gi~~dG~~~~-~Gg~G~----~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (345)
+.|+.-+|.|..-+++ .+|+.+- .-|+-. +.+. ..|-.++..+. .+....+ -+.
T Consensus 202 ~lIv~HLGnGaSi~Ai-~~GksVDTsMG~TpLeGl~MgT------------------RsGdiDp~~v~-~l~~~~~-~s~ 260 (403)
T 2iir_A 202 KIITCHIGNGASVAAV-KYGKCVDTSMGFTPLEGLVMGT------------------RSGDLDPAIPF-FIMEKEG-ISP 260 (403)
T ss_dssp EEEEEEESSSEEEEEE-ETTEEEEESCCSSTTSSSCCSS------------------CCCSCCTTHHH-HHHHHHT-CCH
T ss_pred CEEEEEeCCCeeeeee-ECCEEEEeCCCCCCCCCCCCCC------------------CCCCCChHHHH-HHHHhcC-CCH
Confidence 5688889999755544 8899874 223221 1111 11111222222 2222222 245
Q ss_pred hhHHHHhhcCCC---hH-HHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcc
Q 019144 222 DELIGWTYVDPS---WA-RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL 297 (345)
Q Consensus 222 ~~l~~~~~~~~~---~~-~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~ 297 (345)
+++.+.+++..- .+ -+....++|.+++.+||+.|+.+++-++..+.+.|......++- .+.||+.||+.
T Consensus 261 ~ei~~~Lnk~SGLlgls~G~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lgg-------vDaIVFTgGIG 333 (403)
T 2iir_A 261 QEMYDILNKKSGVYGLSKGFSSDMRDIEEAALKGDEWCKLVLEIYDYRIAKYIGAYAAAMNG-------VDAIVFTAGVG 333 (403)
T ss_dssp HHHHHHHHHSCHHHHHTTTSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CSEEEEEHHHH
T ss_pred HHHHHHHhhcCCeeEecCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCEEEECcccc
Confidence 566666554321 01 11234577888888999999999999999999999999999973 58999999999
Q ss_pred cCcccccchHHHHHHH
Q 019144 298 EANRRWDIGREVVKCI 313 (345)
Q Consensus 298 ~~~~~~~l~~~~~~~l 313 (345)
++...+ ++.+.+.+
T Consensus 334 Ens~~v--R~~i~~~l 347 (403)
T 2iir_A 334 ENSPIT--REDVCSYL 347 (403)
T ss_dssp TTCHHH--HHHHHHTT
T ss_pred cCCHHH--HHHHHhhh
Confidence 886653 66676665
No 71
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=95.86 E-value=0.052 Score=52.01 Aligned_cols=66 Identities=8% Similarity=0.016 Sum_probs=54.9
Q ss_pred chHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHH
Q 019144 240 LVPVVVSCAEAGD---EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCIL 314 (345)
Q Consensus 240 ~~~~v~~~a~~gD---~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~ 314 (345)
..++|.+++++|| +.|+.+++-++..+++.|.+....|+- .+.||+.||+.++...+ ++.+.+.+.
T Consensus 284 D~R~i~~~~~~gd~~~~~A~lA~d~f~yri~k~IGa~aa~L~G-------vDaIVFTgGIGEns~~v--R~~i~~~l~ 352 (404)
T 4h0o_A 284 DMRDILHEIETRGPKAKTCQLAFDVYIKQLAKTIGGLMVEIGG-------LDLLVFTDQMGLEVWQV--RKAICDKMK 352 (404)
T ss_dssp CHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CSEEEEEHHHHHHCHHH--HHHHHHHTG
T ss_pred CHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCEEEECCccccCcHHH--HHHHHhhhh
Confidence 4567888889999 999999999999999999999999873 68999999998776543 667766663
No 72
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.84 E-value=0.023 Score=57.89 Aligned_cols=85 Identities=20% Similarity=0.232 Sum_probs=60.6
Q ss_pred ccccccccccccCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCc---------------cccCHH
Q 019144 7 GEIWDFETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH---------------NSVGED 71 (345)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~---------------~~~~~~ 71 (345)
.+|.|.+..++.. ..|-++||+|+|.+.+.++|+. +|+++......-++. ...+.+
T Consensus 192 ~~ii~ve~g~~~~-~~~GlAvDiGTTtv~~~LvdL~--------tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~ 262 (631)
T 3zyy_X 192 NKALYIKSGSASQ-RVFGLAIDIGTTTVVVQLVDLV--------SGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAE 262 (631)
T ss_dssp EEEEEEEESSCCC-CCEEEEEEECSSEEEEEEEETT--------TCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHH
T ss_pred ceEEEEecCCCCC-CceEEEEEecccceeEEEEECC--------CCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHH
Confidence 4566776655444 3599999999999999999994 899999876432221 011111
Q ss_pred ----HHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 72 ----AARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 72 ----~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
.+++.|.+++.+++.++++++++|..+.|
T Consensus 263 ~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v 295 (631)
T 3zyy_X 263 KLRKAVLSTINELIFQLCKEHGVEKKEIMAAVV 295 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEE
Confidence 25667777888888888999999987655
No 73
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=95.81 E-value=0.052 Score=52.34 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=86.4
Q ss_pred CeEEEEeCccceeeeecCCCCeEE-eccCCC----CcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCCh
Q 019144 147 HGCVLIAGTGTIAYGFTEDGRDAR-AAGAGP----ILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSP 221 (345)
Q Consensus 147 ~~v~v~~GTG~~g~gi~~dG~~~~-~Gg~G~----~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 221 (345)
+.|+.-+|.|..-+++ .+|+.+- .-|+-. +.+. ..|-.++..+. .+....+ -+.
T Consensus 203 ~lIv~HLGnGaSi~Ai-~~GksVDTsMG~TpleGl~MgT------------------RsGdiDp~~l~-~l~~~~~-~s~ 261 (408)
T 1g99_A 203 KIITCHLGNGSSITAV-EGGKSVETSMGFTPLEGLAMGT------------------RCGSIDPAIVP-FLMEKEG-LTT 261 (408)
T ss_dssp EEEEEEESSSEEEEEE-ETTEEEEESCCSSTTSSSCCSS------------------CCCSCCTTHHH-HHHHHHT-CCH
T ss_pred CEEEEEeCCccchhhe-ECCEEEEeCCCCCCCCCCCCCC------------------CCCCCCHHHHH-HHHHhcC-CCH
Confidence 5688889999755544 8899874 222211 1111 11111222222 2222222 245
Q ss_pred hhHHHHhhcCCC---hHHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCccc
Q 019144 222 DELIGWTYVDPS---WARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLE 298 (345)
Q Consensus 222 ~~l~~~~~~~~~---~~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~ 298 (345)
+++.+.+++..- .+-+....++|.+++.+||+.|+.+++-++..+.+.|......+.- .+.||+.||+.+
T Consensus 262 ~ei~~~Lnk~SGLlglsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lgg-------vDaiVFTgGIGE 334 (408)
T 1g99_A 262 REIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNG-------ADAVVFTAGIGE 334 (408)
T ss_dssp HHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTS-------CSEEEEEHHHHH
T ss_pred HHHHHHHhhcCCceEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhhCC-------CCEEEECccccc
Confidence 666666654321 0111234577888888999999999999999999999999999973 589999999997
Q ss_pred CcccccchHHHHHHHH
Q 019144 299 ANRRWDIGREVVKCIL 314 (345)
Q Consensus 299 ~~~~~~l~~~~~~~l~ 314 (345)
+.+.+ ++.+.+.|.
T Consensus 335 ns~~v--R~~i~~~l~ 348 (408)
T 1g99_A 335 NSASI--RKRILTGLD 348 (408)
T ss_dssp HCHHH--HHHHHTTCG
T ss_pred cCHHH--HHHHHhhhh
Confidence 76543 666655553
No 74
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=95.79 E-value=1.7 Score=43.13 Aligned_cols=100 Identities=15% Similarity=0.164 Sum_probs=65.8
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCc-c----ccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH-N----SVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~-~----~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~ 97 (345)
++||||-....+.+++++. ++++++......... . +.....-.+.+..++++++++ ++..++.+
T Consensus 7 ~iL~i~ts~~~~~~al~~~---------~~~~~~~~~~~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ 75 (540)
T 3en9_A 7 ICLGLEGTAEKTGVGIVTS---------DGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDL 75 (540)
T ss_dssp EEEEEECSSSEEEEEEEET---------TSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCE
T ss_pred eEEEEEcCccceEEEEEEC---------CCeEEEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcE
Confidence 8999999999999999997 668887665422110 0 001123456777788888887 77778888
Q ss_pred eEEee-cCCCCh-hHHHHHHHHHHhhCCCCceEEEeCcHH
Q 019144 98 VCLAV-SGVNHP-TDQQRILNWLRDIFPGNVRLYVHNDAL 135 (345)
Q Consensus 98 Igig~-pG~~~~-~~~~~l~~~L~~~~~~~~pV~v~NDa~ 135 (345)
|+++. ||.... .-+....+.|...++ .|+.=.|.-.
T Consensus 76 ia~~~gPG~~~~l~vg~~~ak~la~~~~--~p~~~v~h~~ 113 (540)
T 3en9_A 76 IAFSQGPGLGPSLRVTATVARTLSLTLK--KPIIGVNHCI 113 (540)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHHT--CCEEEEEHHH
T ss_pred EEEecCCCchhhHHHHHHHHHHHHHHhC--CCeeEeccHH
Confidence 88765 554321 123456677777776 7876666544
No 75
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=95.29 E-value=0.13 Score=39.47 Aligned_cols=82 Identities=10% Similarity=0.046 Sum_probs=54.9
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCe---eEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i---~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Ig 99 (345)
.+||+|.|..+|=+++.|. .+.+ +.... . .+.+..++.|.+.+++. ++..+.
T Consensus 2 riLglD~G~kriGvAvsd~---------~~~~A~pl~ti~--~-----~~~~~~~~~l~~li~e~---------~v~~iV 56 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEE---------GVPLASGRGYLV--R-----KTLEEDVEALLDFVRRE---------GLGKLV 56 (98)
T ss_dssp CEEEEEESSSEEEEEEECS---------CCSSCCCEEEEE--C-----CCHHHHHHHHHHHHHHH---------TCCEEE
T ss_pred cEEEEEeCCCEEEEEEEeC---------CCCeeeeeEEEE--c-----cCcHHHHHHHHHHHHHc---------CCCEEE
Confidence 3899999999999999997 4433 22221 1 13455667777666664 577899
Q ss_pred Eeec----CCCChhH--HHHHHHHHHhhCCCCceEEEeC
Q 019144 100 LAVS----GVNHPTD--QQRILNWLRDIFPGNVRLYVHN 132 (345)
Q Consensus 100 ig~p----G~~~~~~--~~~l~~~L~~~~~~~~pV~v~N 132 (345)
||+| |-.++.. ...+.+.|+++ + .||.+-+
T Consensus 57 vGlP~~mdGt~~~~~~~~~~f~~~L~~~-~--lpV~~~D 92 (98)
T 1iv0_A 57 VGLPLRTDLKESAQAGKVLPLVEALRAR-G--VEVELWD 92 (98)
T ss_dssp EECCCCCCSSSCCCSSTTHHHHHHHHHT-T--CEEEEEC
T ss_pred EeeccCCCCCcCHHHHHHHHHHHHHhcC-C--CCEEEEC
Confidence 9988 3333322 24688888887 6 8987754
No 76
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=95.26 E-value=0.65 Score=43.71 Aligned_cols=91 Identities=16% Similarity=0.055 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCC---
Q 019144 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g--- 144 (345)
+++++...+.+.+.+..++ .+. .+..+.+++|-..+......+++..+. .++ ..+.+.|+..+++++-...
T Consensus 111 ~~~~i~~~~L~~l~~~a~~~~~~---~~~~~vitvP~~~~~~~r~~~~~a~~~-aGl-~~~~li~Ep~Aaa~~~~~~~~~ 185 (383)
T 1dkg_D 111 APPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATKDAGRI-AGL-EVKRIINEPTAAALAYGLDKGT 185 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSS---CCCEEEECBCTTCCHHHHHHHHHHHHH-TTC-EESCCCBHHHHHHHHHTCCC-C
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEeccHHHHHHHHHhccCC
Confidence 4566555444444333222 232 355678999998776655666666544 452 4577899999887642111
Q ss_pred -CCCeEEEEeCccceeeeecC
Q 019144 145 -KLHGCVLIAGTGTIAYGFTE 164 (345)
Q Consensus 145 -~~~~v~v~~GTG~~g~gi~~ 164 (345)
....+++=+|.|..-..++.
T Consensus 186 ~~~~~lVvD~Gggttdvsv~~ 206 (383)
T 1dkg_D 186 GNRTIAVYDLGGGTFDISIIE 206 (383)
T ss_dssp CEEEEEEEEECSSCEEEEEEE
T ss_pred CCcEEEEEEcCCCeEEEEEEE
Confidence 12345666787765554544
No 77
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=95.10 E-value=2.8 Score=42.97 Aligned_cols=95 Identities=15% Similarity=0.077 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcc-c-C--
Q 019144 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-T-M-- 143 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~-~-~-- 143 (345)
+++++...+.+.+.+..++ .+ ..+..+.|++|-..+......+++..+. .++ .++.+.|+..+|+++- . .
T Consensus 114 speei~a~~L~~lk~~ae~~lg---~~v~~~VITVPa~f~~~qR~a~~~Aa~~-AGl-~~~~li~EP~AAAlaygl~~~~ 188 (675)
T 3d2f_A 114 SATQLAAMFIDKVKDTVKQDTK---ANITDVCIAVPPWYTEEQRYNIADAARI-AGL-NPVRIVNDVTAAGVSYGIFKTD 188 (675)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHC---SCCCEEEEEECTTCCHHHHHHHHHHHHH-TTC-EEEEEEEHHHHHHHHHHHHCSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCcceEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEEcchHHHHHHHhhhccc
Confidence 4666666655555443332 23 2466789999998876665566665544 343 5789999999887641 1 1
Q ss_pred -----C-CCCeEEEEeCccceeeeecC--CCCe
Q 019144 144 -----G-KLHGCVLIAGTGTIAYGFTE--DGRD 168 (345)
Q Consensus 144 -----g-~~~~v~v~~GTG~~g~gi~~--dG~~ 168 (345)
. ....+++=+|.|..-..++. +|.+
T Consensus 189 ~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~ 221 (675)
T 3d2f_A 189 LPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL 221 (675)
T ss_dssp CCCSSSCCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred cccccCCCcEEEEEEcCCCcEEEEEEEecCCeE
Confidence 1 12345556787765555543 5654
No 78
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=94.97 E-value=3.1 Score=40.97 Aligned_cols=91 Identities=16% Similarity=0.032 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcc-c-CC-
Q 019144 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-T-MG- 144 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~-~-~g- 144 (345)
++++++..+.+.+.+..++ .+ ..+..+.|++|-..+......+++..+ ..++ ..+++.|+..+|+++- . ..
T Consensus 85 ~~~ei~a~~L~~l~~~ae~~l~---~~~~~~VitvPa~~~~~qr~a~~~a~~-~AGl-~~~~li~Ep~AAAlay~~~~~~ 159 (509)
T 2v7y_A 85 TPQEISAIILQYLKSYAEDYLG---EPVTRAVITVPAYFNDAQRQATKDAGR-IAGL-EVERIINEPTAAALAYGLDKEE 159 (509)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---SCCCEEEEEECTTCCHHHHHHHHHHHH-HTTC-EEEEEEEHHHHHHHHTTGGGSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEECCCCCHHHHHHHHHHHH-HcCC-CeEEEecCHHHHHHHHhhccCC
Confidence 5677766665555443332 23 235678899999877666566666654 3453 5689999999887742 1 11
Q ss_pred CCCeEEEEeCccceeeeecC
Q 019144 145 KLHGCVLIAGTGTIAYGFTE 164 (345)
Q Consensus 145 ~~~~v~v~~GTG~~g~gi~~ 164 (345)
....+++=+|.|..-..++.
T Consensus 160 ~~~vlV~D~GgGT~Dvsv~~ 179 (509)
T 2v7y_A 160 DQTILVYDLGGGTFDVSILE 179 (509)
T ss_dssp SEEEEEEEECSSCEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEEE
Confidence 22345566787765544443
No 79
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=94.60 E-value=0.077 Score=44.07 Aligned_cols=95 Identities=18% Similarity=0.219 Sum_probs=58.7
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeE-EEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEe
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLA-RAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~-~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig 101 (345)
.+||+|.|..+|.+++.|. .+.+.. .....+.+ . ..+..++.|.+++++. ++..|.||
T Consensus 4 riLGiDpG~~riGvAv~d~---------~g~~a~p~~~I~~~~-~--r~~~~~~~l~~li~~~---------~~~~ivVG 62 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE---------MGWTAQGIETIKINE-A--EGDYGLSRLSELIKDY---------TIDKIVLG 62 (150)
T ss_dssp EEEEEEECSSEEEEEEECT---------TSSSEEEEEEEECBG-G--GTBCCHHHHHHHHTTS---------EEEEEEEE
T ss_pred EEEEEEccCCEEEEEEEEC---------CCCEEeeEEEEEcCC-c--chHHHHHHHHHHHHHc---------CCCEEEEe
Confidence 6999999999999999998 666544 22222211 0 0223444555444432 57788999
Q ss_pred ec----CCCChhHH--HHHHHHHHhhCCCCceEEEeCcHHHHHhc
Q 019144 102 VS----GVNHPTDQ--QRILNWLRDIFPGNVRLYVHNDALAALAS 140 (345)
Q Consensus 102 ~p----G~~~~~~~--~~l~~~L~~~~~~~~pV~v~NDa~~a~~~ 140 (345)
.| |-.++... ..+...|.+.++ .||++-+.......+
T Consensus 63 lP~~~nGt~~~~~~~ar~f~~~L~~~~~--lpV~~vDEr~Ts~~A 105 (150)
T 1vhx_A 63 FPKNMNGTVGPRGEASQTFAKVLETTYN--VPVVLWDERLTTMAA 105 (150)
T ss_dssp CCCCBTTBCCHHHHHHHHHHHHHHHHHC--SCEEEECCSSCHHHH
T ss_pred eeecCCcchhHHHHHHHHHHHHHHHhhC--CCEEEecCCCCHHHH
Confidence 88 21222221 356667777776 899998877655443
No 80
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=94.52 E-value=4.5 Score=40.78 Aligned_cols=90 Identities=16% Similarity=0.049 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHHHHHHHHHc-CCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcc-c-CC-
Q 019144 69 GEDAARETIEKVMADALLKS-GSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-T-MG- 144 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~~-~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~-~-~g- 144 (345)
+++++...+.+.+.+..+.. +. .+..+.|++|-..+......+++..+.. ++ ..+.+.|+..+|+++- . ..
T Consensus 111 ~p~ei~a~iL~~lk~~ae~~lg~---~v~~~VITVPa~f~~~qr~a~~~Aa~~A-Gl-~v~~li~EP~AAAlaygl~~~~ 185 (605)
T 4b9q_A 111 APPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATKDAGRIA-GL-EVKRIINEPTAAALAYGLDKGT 185 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHHHHc-CC-ceEEEeCcHHHHHHHhhhhccC
Confidence 45665555555444444332 32 4667899999988766655666655443 42 5789999999887752 1 11
Q ss_pred -CCCeEEEEeCccceeeeec
Q 019144 145 -KLHGCVLIAGTGTIAYGFT 163 (345)
Q Consensus 145 -~~~~v~v~~GTG~~g~gi~ 163 (345)
....+++=+|.|..-..++
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 4b9q_A 186 GNRTIAVYDLGGGAFDISII 205 (605)
T ss_dssp SSEEEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEE
Confidence 1234455577776444443
No 81
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=93.87 E-value=0.12 Score=48.38 Aligned_cols=81 Identities=19% Similarity=0.162 Sum_probs=41.6
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
++||+||||-|+|+++.+. +|.+ .....+++-| ++++ .+.+.++++.++ +...+|-+
T Consensus 1 ~iiG~DIGGAn~K~a~~~~---------~g~~-~~~~~~~PlW--~~~~----~L~~~l~~~~~~-------~~~~avtM 57 (334)
T 3cet_A 1 MILGIDIGGANTKITELHE---------NGEF-KVHHLYFPMW--KNND----KLAEVLKTYSND-------VSHVALVT 57 (334)
T ss_dssp CEEEEEEC--CEEEEEECS---------TTCC-EEEEC----------------------------------CCEEEEEE
T ss_pred CeeEEEecccceeeeeecC---------CCce-EEEEEecCCc--CCch----HHHHHHHHHHhh-------hccEEEEe
Confidence 3799999999999999887 7887 4444555544 3444 344444444432 24566888
Q ss_pred cCC-----CChhH-HHHHHHHHHhhCCCCceE
Q 019144 103 SGV-----NHPTD-QQRILNWLRDIFPGNVRL 128 (345)
Q Consensus 103 pG~-----~~~~~-~~~l~~~L~~~~~~~~pV 128 (345)
.|= .++.+ ...|.+.++++|+ .||
T Consensus 58 TgELaD~f~~k~eGV~~I~~~v~~~~~--~~v 87 (334)
T 3cet_A 58 TAELADSYETKKEGVDNILNAAESAFG--SNI 87 (334)
T ss_dssp CCC------CTTHHHHHHHHHHHHHHT--TCE
T ss_pred chhhhhhhcCHHHHHHHHHHHHHHhcC--Cce
Confidence 995 23433 3567788888886 676
No 82
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=93.71 E-value=1.3 Score=41.64 Aligned_cols=92 Identities=17% Similarity=0.241 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHH-HcCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCCCeEEEE
Q 019144 74 RETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLI 152 (345)
Q Consensus 74 ~~~l~~~i~~~~~-~~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~~~v~v~ 152 (345)
|+.+.++++.++. +.+.++. -..+.+..|-...+.....+.+.+-+.|+. ..+++.|+..+++++ .|...+++|=
T Consensus 79 ~d~~e~i~~~~~~~~L~~~~~-~~~vvit~p~~~~~~~r~~~~e~~fe~~g~-~~~~~~~e~~aaa~a--~g~~~~lVvD 154 (375)
T 2fxu_A 79 WDDMEKIWHHTFYNELRVAPE-EHPTLLTEAPLNPKANREKMTQIMFETFNV-PAMYVAIQAVLSLYA--SGRTTGIVLD 154 (375)
T ss_dssp HHHHHHHHHHHHHTTSCCCGG-GSCEEEEECTTCCHHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHH--TTCSSEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCc-CCcEEEEeCCCCcHHHHHHHHHHHHHhcCc-ceEEEccchheeeee--cCCCeEEEEE
Confidence 4556666667763 3344442 245788899877766666688888788873 459999999999886 3456788999
Q ss_pred eCccceeeeecCCCCeE
Q 019144 153 AGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 153 ~GTG~~g~gi~~dG~~~ 169 (345)
+|.|..-...+.+|.+.
T Consensus 155 iG~gtt~v~~v~~G~~~ 171 (375)
T 2fxu_A 155 SGDGVTHNVPIYEGYAL 171 (375)
T ss_dssp ECSSCEEEEEEETTEEC
T ss_pred cCCCceEEeEeECCEEe
Confidence 99887666667788654
No 83
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=93.67 E-value=1.2 Score=42.25 Aligned_cols=76 Identities=16% Similarity=0.072 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhC-CCceee---CCCCC
Q 019144 253 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY-PGAVPI---RPKVE 328 (345)
Q Consensus 253 ~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~-~~~~i~---~~~~a 328 (345)
..|..++.-.++.++..........+. ..||++||.+...+. +.+.+.+.+.-+. -..++. .+...
T Consensus 280 DIa~gll~sVa~~I~~lA~l~A~~~~i--------~~IvftGgfla~n~~--~~~~L~~~l~~ws~g~~~~~~~~~~~y~ 349 (360)
T 2i7n_A 280 DLARATLVTITNNIGSIARMCALNENI--------DRVVFVGNFLRINMV--SMKLLAYAMDFWSKGQLKALFLEHEGYF 349 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--------CCEEEESGGGCSSSH--HHHHHHHHHHHHTTTSCCEEEETTTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC--------CeEEEeCcccccCHH--HHHHHHHHHhhhhcCCeeEEEcCCccHH
Confidence 345566666666655554444567774 589999995555454 3777877776431 123333 35788
Q ss_pred hHHHHHHHHH
Q 019144 329 PAVGAALLAW 338 (345)
Q Consensus 329 ~~~GAa~la~ 338 (345)
+++||++.++
T Consensus 350 GAlGAaL~~~ 359 (360)
T 2i7n_A 350 GAVGALLELF 359 (360)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 84
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=93.57 E-value=0.9 Score=41.34 Aligned_cols=121 Identities=22% Similarity=0.218 Sum_probs=71.1
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeE
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Ig 99 (345)
|..+.|.+|+|-|+++++++|. +++++...+..+ .++....+. +++..++.++.
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~---------~~~~~~~~r~~t-------~de~~~~l~----------~~~~~~i~~vi 74 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEG---------AARSVAGGLAES-------DDALVEQLT----------SQQALPVRACR 74 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEET---------TTEEEEEEEESS-------HHHHHHHHH----------HTTTSCEEEEE
T ss_pred ccCcEEEEEeCCCeeEEEEEeC---------CCEEEEEEEecC-------HHHHHHHHh----------cCcccCCCEEE
Confidence 5558999999999999999994 357776666432 133333222 13334677776
Q ss_pred EeecCCCChhHHHHHHHHHHhhCCCCceEEE---------eCcH----------HHHHhcccC-CCCCeEEEEeCcccee
Q 019144 100 LAVSGVNHPTDQQRILNWLRDIFPGNVRLYV---------HNDA----------LAALASGTM-GKLHGCVLIAGTGTIA 159 (345)
Q Consensus 100 ig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v---------~NDa----------~~a~~~~~~-g~~~~v~v~~GTG~~g 159 (345)
++.-. .|.-...++..+++.|+. .|.++ .|.. -+++++++. -..+.++|-+||=+--
T Consensus 75 isSV~--vp~~~~~l~~~~~~~~~~-~p~~v~~~~~~~gl~~~Y~~P~~lGaDR~~~avaA~~~y~~~~iVVD~GTAtT~ 151 (271)
T 2f9w_A 75 LVSVR--SEQETSQLVARLEQLFPV-SALVASSGKQLAGVRNGYLDYQRLGLDRWLALVAAHHLAKKACLVIDLGTAVTS 151 (271)
T ss_dssp EEECS--CHHHHHHHHHHHHHHSSC-CCEECCCCSEETTEECCSSSGGGSCHHHHHHHHHHHHHHSSCEEEEEESSEEEE
T ss_pred EEECC--chHHHHHHHHHHHHHcCC-CeEEEeCCCccCCceecCCChhhccHHHHHHHHHHHHhcCCCEEEEEcCCceEE
Confidence 65442 354445678888888762 34333 2221 122333221 1247889999999755
Q ss_pred eeecCCCCeE
Q 019144 160 YGFTEDGRDA 169 (345)
Q Consensus 160 ~gi~~dG~~~ 169 (345)
-.+..+|+..
T Consensus 152 D~V~~~G~~l 161 (271)
T 2f9w_A 152 DLVAADGVHL 161 (271)
T ss_dssp EEECTTSBEE
T ss_pred EEECCCCeEE
Confidence 5455577765
No 85
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=93.33 E-value=0.24 Score=47.98 Aligned_cols=75 Identities=12% Similarity=0.122 Sum_probs=53.3
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCc---cccCHHHHHHHHHHHHHHHHHHcCCCccccce-
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH---NSVGEDAARETIEKVMADALLKSGSNRSAVRA- 97 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~- 97 (345)
.+++|+|||+|++++++....+ ...++++....++... .=.+.+.+.+.|.++++++-..++. ++..
T Consensus 8 ~~ivglDIGts~I~~vv~~~~~------~~~~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~---~i~~~ 78 (419)
T 4a2a_A 8 VFYTSIDIGSRYIKGLVLGKRD------QEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQK---SLRSD 78 (419)
T ss_dssp CEEEEEEECSSEEEEEEEEC----------CEEEEEEEEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTS---CCCSE
T ss_pred CEEEEEEccCCEEEEEEEEEcC------CCCEEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCC---CcCce
Confidence 5899999999999999987621 0127777766543211 1146788888888888888777775 4667
Q ss_pred eEEeecCC
Q 019144 98 VCLAVSGV 105 (345)
Q Consensus 98 Igig~pG~ 105 (345)
+.+++||.
T Consensus 79 v~v~i~g~ 86 (419)
T 4a2a_A 79 FVISFSSV 86 (419)
T ss_dssp EEEEECCT
T ss_pred EEEEEcCC
Confidence 78888997
No 86
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=92.76 E-value=0.79 Score=42.55 Aligned_cols=140 Identities=11% Similarity=0.105 Sum_probs=84.1
Q ss_pred cccCCccEEEEEecCccceeeEEEcCccCCCCCCCCC--CeeEEEecCCCCc------cccCHHHHHHHHHHHHHHHHHH
Q 019144 16 EESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNH------NSVGEDAARETIEKVMADALLK 87 (345)
Q Consensus 16 ~~~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g--~i~~~~~~~~~~~------~~~~~~~~~~~l~~~i~~~~~~ 87 (345)
...+++ .+.+||+|++++++.+++.. ++ +++.+.+.+..-. ... .++.++...++++++.+.
T Consensus 7 ~~~~~m-~~a~IDiGSns~rl~I~~~~--------~~~~~~i~~~k~~vrLg~g~~~~g~l-s~eai~r~~~~L~~f~~~ 76 (315)
T 1t6c_A 7 DNKPIM-RVASIDIGSYSVRLTIAQIK--------DGKLSIILERGRITSLGTKVKETGRL-QEDRIEETIQVLKEYKKL 76 (315)
T ss_dssp ---CCE-EEEEEEECSSEEEEEEEEEE--------TTEEEEEEEEEEECCTTTTHHHHSSC-CHHHHHHHHHHHHHHHHH
T ss_pred cCCCCc-EEEEEEECcCcEEEEEEEEc--------CCcEEEEeeeeEEeecCCCccccCCc-CHHHHHHHHHHHHHHHHH
Confidence 344543 67889999999999999973 23 3344433321100 011 235667777777776654
Q ss_pred cC-CCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHH---Hhcc--cCC-CCCeEEEEeCccceee
Q 019144 88 SG-SNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG--TMG-KLHGCVLIAGTGTIAY 160 (345)
Q Consensus 88 ~~-~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a---~~~~--~~g-~~~~v~v~~GTG~~g~ 160 (345)
.. ....++. .++++.+=+......+.+.+++.++ .++.|-+.-.=| .++. ..+ ..+.+++=+|.|+...
T Consensus 77 ~~~~~v~~i~--~vATsA~R~A~N~~~fl~~v~~~~G--~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl 152 (315)
T 1t6c_A 77 IDEFKVERVK--AVATEAIRRAKNAEEFLERVKREVG--LVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEY 152 (315)
T ss_dssp HHHTTCSEEE--EEECHHHHTSTTHHHHHHHHHHHTC--CCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEE
T ss_pred HHHCCCCeEE--EEEcHHHHcCcCHHHHHHHHHHHHC--CCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEE
Confidence 32 1122333 4677776333344568888999998 788888887633 2221 123 4467888899998777
Q ss_pred eecCCCCeE
Q 019144 161 GFTEDGRDA 169 (345)
Q Consensus 161 gi~~dG~~~ 169 (345)
.+..++++.
T Consensus 153 ~~~~~~~~~ 161 (315)
T 1t6c_A 153 VFGKGYKVR 161 (315)
T ss_dssp EEEETTEEE
T ss_pred EEEeCCcee
Confidence 666677764
No 87
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=92.56 E-value=1.7 Score=41.48 Aligned_cols=93 Identities=19% Similarity=0.228 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhccc-------CCC
Q 019144 74 RETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT-------MGK 145 (345)
Q Consensus 74 ~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~-------~g~ 145 (345)
|+.+.++++.++.+ .+.++. ...+.+.+|-..++.....+.+.+-+.++. ..+++.|++.+++++.+ .+.
T Consensus 86 ~d~~e~i~~~~~~~~L~~~~~-~~~vvit~p~~~~~~~r~~~~e~~fe~~g~-~~~~l~~ep~aa~~a~~~~~~~~~~~~ 163 (418)
T 1k8k_A 86 WDLMERFMEQVIFKYLRAEPE-DHYFLLTEPPLNTPENREYTAEIMFESFNV-PGLYIAVQAVLALAASWTSRQVGERTL 163 (418)
T ss_dssp HHHHHHHHHHHHHTTTCCCGG-GCCEEEEECTTCCHHHHHHHHHHHHHTSCC-SEEEEEEHHHHHHHHGGGSTTCCSCCC
T ss_pred HHHHHHHHHHHHHhccCCCCC-CCcEEEEeCCCCCHHHHHHHHHHHHHhcCC-CEEEEechHHHHhhhhhcccccCCCCC
Confidence 34455556666643 444443 456889999887766667788888777873 45999999998887622 233
Q ss_pred CCeEEEEeCccceeeeecCCCCeE
Q 019144 146 LHGCVLIAGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 146 ~~~v~v~~GTG~~g~gi~~dG~~~ 169 (345)
.+++|=+|.|..-...+.+|.+.
T Consensus 164 -~glVvDiG~gtt~v~~v~~G~~~ 186 (418)
T 1k8k_A 164 -TGTVIDSGDGVTHVIPVAEGYVI 186 (418)
T ss_dssp -CEEEEEESSSCEEEEEEETTEEC
T ss_pred -eEEEEEcCCCceEEEEeECCEEc
Confidence 67888899887666667788764
No 88
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=92.11 E-value=0.11 Score=50.23 Aligned_cols=141 Identities=14% Similarity=0.081 Sum_probs=79.4
Q ss_pred CeEEEEeCccceeeeecCCCCeEE-eccCCCCcCCcCcHHHHHHHHHHHHHHHhcCCCCCChhHHHHHHHcCCCChhhHH
Q 019144 147 HGCVLIAGTGTIAYGFTEDGRDAR-AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELI 225 (345)
Q Consensus 147 ~~v~v~~GTG~~g~gi~~dG~~~~-~Gg~G~~~gd~G~a~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 225 (345)
+.|+.-+|.|..-+++ .+|+.+- .=|+. ..+|-. .....|-.++. ..-.+....+. +.+++.
T Consensus 220 ~lIv~HLGnGaSi~Ai-~~GksvDTsMG~T---pleGl~-----------mgtRsGdiDp~-~l~~l~~~~g~-s~~ei~ 282 (415)
T 3sk3_A 220 NIITCHLGNGGSVSAI-RNGKCVDTSMGLT---PLEGLV-----------MGTRSGDIDPA-IIFHLHDTLGM-SVDQIN 282 (415)
T ss_dssp CEEEEECSSSCEEEEE-ETTEEEEECCCCC---CSCC------------------CCCCHH-HHHHHHHHHTC-CHHHHH
T ss_pred cEEEEEeCCCceEEEE-ECCEEEEeCCCcC---CCCCcc-----------CCCCCCCCChH-HHHHHHHhcCC-CHHHHH
Confidence 5788899999866555 8899874 11221 122210 00011221111 12222222222 456666
Q ss_pred HHhhcCC---ChHHHhcchHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCccc
Q 019144 226 GWTYVDP---SWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRR 302 (345)
Q Consensus 226 ~~~~~~~---~~~~~~~~~~~v~~~a~~gD~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~ 302 (345)
+.+++.. ..+-+....++| +.+.+||+.|+.+++-++..+.+.|......|+- ..+.||+.||+.++...
T Consensus 283 ~~Lnk~SGLlglsG~S~D~R~l-e~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~G------~vDaIVFTgGIGEns~~ 355 (415)
T 3sk3_A 283 KMLTKESGLLGLTEVTSDCRYV-EDNYATKEDAKRAMDVYCHRLAKYIGSYTALMDG------RLDAVVFTGGIGENAAM 355 (415)
T ss_dssp HHC------CCSTTTTCGGGCS-SCCCCCHHHHHHHHHHHHHHHHHHHHHGGGGSTT------CCCEEEEEHHHHTTCHH
T ss_pred HHHhcCcCcccccCCcchHHHH-HHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHhCC------CCCEEEECCccccCCHH
Confidence 6665421 011111122333 3334799999999999999999999999999961 13789999999988654
Q ss_pred ccchHHHHHHH
Q 019144 303 WDIGREVVKCI 313 (345)
Q Consensus 303 ~~l~~~~~~~l 313 (345)
. ++.+-+.|
T Consensus 356 v--R~~v~~~l 364 (415)
T 3sk3_A 356 V--RELSLGKL 364 (415)
T ss_dssp H--HHHHHHTC
T ss_pred H--HHHHHhhc
Confidence 3 66665555
No 89
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=91.46 E-value=7 Score=35.86 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=50.5
Q ss_pred ceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccC---CCCCeEEEEeCccceeeeecCCCCeEE
Q 019144 96 RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---GKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (345)
Q Consensus 96 ~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~---g~~~~v~v~~GTG~~g~gi~~dG~~~~ 170 (345)
..+.+++|-..+......+++.++ ..++ ..+.+.|+..+++++... .....+++=+|.|..-..++..|.+..
T Consensus 96 ~~~vitvP~~~~~~~r~~~~~a~~-~aG~-~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~ 171 (344)
T 1jce_A 96 PRVVIGVPIGITDVERRAILDAGL-EAGA-SKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT 171 (344)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHH-HTTC-SEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHH-HcCC-CeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe
Confidence 578899998877666666777664 4553 578999999988775321 123567777888876666777776653
No 90
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=91.40 E-value=2.6 Score=36.85 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=69.4
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
.+|+||-....+.+++++. ++++.+....... . .+.+...|++++++++++..+|.+|+++.
T Consensus 3 ~iLaIdTS~~~~svAl~~~----------~~~~~~~~~~~~~----H----s~~L~p~i~~~L~~a~~~~~dld~Iav~~ 64 (213)
T 3r6m_A 3 KILAIDTATENCSVALLVN----------DQVISRSEVAPRD----H----TKKVLPMVDEVLKEAGLTLQDLDALAFGR 64 (213)
T ss_dssp CEEEEECSSSEEEEEEESS----------SCEEEEEEECCSC----C----HHHHHHHHHHHHHTTTCCTTTCSEEEEEE
T ss_pred EEEEEEccCcceEEEEEEC----------CEEEEEEEechHH----H----HHHHHHHHHHHHHHcCCCHHHccEEEEec
Confidence 6899999999999999984 6777775432221 2 24666788899999999988999888864
Q ss_pred cCCCChhH---HHHHHHHHHhhCCCCceEEEeCcHHHHHh
Q 019144 103 SGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (345)
Q Consensus 103 pG~~~~~~---~~~l~~~L~~~~~~~~pV~v~NDa~~a~~ 139 (345)
||.+-+. +....+-|.-.++ .|++=-|--.+.+.
T Consensus 65 -GPGsfTglRig~~~AkgLa~~~~--iPl~gVstL~a~a~ 101 (213)
T 3r6m_A 65 -GPGSFTGVRIGIGIAQGLAFGAE--LPMIGVSTLAAMAQ 101 (213)
T ss_dssp -ESSCHHHHHHHHHHHHHHHHHTT--CCEEEEEHHHHHHH
T ss_pred -CCCchhhHHHHHHHHHHHHHHhC--CCEEEEcCHHHHHH
Confidence 5544432 3456778887887 89887777665544
No 91
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=91.08 E-value=1.7 Score=40.18 Aligned_cols=141 Identities=12% Similarity=0.125 Sum_probs=84.4
Q ss_pred CCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcC-CC
Q 019144 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSG-SN 91 (345)
Q Consensus 19 ~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~~~l~~~i~~~~~~~~-~~ 91 (345)
+|...+.+||+|+.++++.+++..+ ..-+++.+.+.+.. ..... .++.+++..++++++.+... ..
T Consensus 1 ~m~~~~A~IDiGSNsirL~I~~~~~------~~~~~i~~~k~~vrLg~g~~~~g~l-s~eai~r~~~~L~~f~~~~~~~~ 73 (315)
T 3mdq_A 1 GMSQRIGVIDMGTNTFHLLITDIVN------DRPHTLVNEKSAVGLGKGGITKGFI-TEEAMDRALDTLKKFRVILDEHA 73 (315)
T ss_dssp ---CEEEEEEECSSEEEEEEEEEET------TEEEEEEEEEEECCSSTTTGGGTCC-CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCceEEEEEecCCcEEEEEEEEcC------CceEEeeeceeeeeccccccccCCc-CHHHHHHHHHHHHHHHHHHHHcC
Confidence 3666899999999999999999731 02234444433211 00112 24567777777777765442 12
Q ss_pred ccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHH---Hhcc--cCC--CCCeEEEEeCccceeeeecC
Q 019144 92 RSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG--TMG--KLHGCVLIAGTGTIAYGFTE 164 (345)
Q Consensus 92 ~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a---~~~~--~~g--~~~~v~v~~GTG~~g~gi~~ 164 (345)
..++. .++++.+=+......+.+.+++.++ .++.|-+.-.=| .++. ... ..+.+++=+|.|+.-..+..
T Consensus 74 v~~v~--~vATsA~R~A~N~~~fl~~i~~~tG--~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 74 VVHVI--ATGTSAVRSGSNKQVLIDRIKKEVN--IDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp CCEEE--EEECHHHHHCTTHHHHHHHHHHHHC--CCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC
T ss_pred CCEEE--EEeeHHHHcCcCHHHHHHHHHHHHC--CCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE
Confidence 22343 4566665222334568888999998 788888776533 2221 122 34678888999998877777
Q ss_pred CCCeEE
Q 019144 165 DGRDAR 170 (345)
Q Consensus 165 dG~~~~ 170 (345)
++++..
T Consensus 150 ~~~~~~ 155 (315)
T 3mdq_A 150 KNEILW 155 (315)
T ss_dssp SSCEEE
T ss_pred CCeEee
Confidence 777653
No 92
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=90.45 E-value=5.2 Score=37.26 Aligned_cols=68 Identities=19% Similarity=0.183 Sum_probs=38.7
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCC-cc----ccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN-HN----SVGEDAARETIEKVMADALLKSGSNRSAVR 96 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~-~~----~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~ 96 (345)
..++|||+|+|++++++..- + ..++......+.+. .. -.+++.+.+.+.+++.+ .+. ++.
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~-~-------~~~i~~~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~----~~~---~~~ 77 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSG-N-------PPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLE----ART---RKR 77 (377)
T ss_dssp CCCEEEEECSSEEEEEEEET-T-------TTEEEEEEEEECCTTSEETTEESCHHHHHHHHHHHHHH----HTC---CCC
T ss_pred CceEEEEeCCCeEEEEEEeC-C-------ceEEEEEEeEECCCCcccCCCcCCHHHHHHHHHHHHHH----cCC---Ccc
Confidence 36899999999999998853 1 22243333222221 10 13456555555555444 444 345
Q ss_pred eeEEeecC
Q 019144 97 AVCLAVSG 104 (345)
Q Consensus 97 ~Igig~pG 104 (345)
.+.+++||
T Consensus 78 ~v~~~i~~ 85 (377)
T 2ych_A 78 YVVTALSN 85 (377)
T ss_dssp EEEEEECG
T ss_pred eEEEEecC
Confidence 66778888
No 93
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=89.86 E-value=5.8 Score=34.64 Aligned_cols=98 Identities=9% Similarity=-0.080 Sum_probs=70.1
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEe
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig 101 (345)
.++|++|-....+.+++++. ++++ ....... . .-.+.|...|++++++++++..+|.+|+++
T Consensus 12 ~~iLaidTS~~~~sval~~~----------~~~l-~~~~~~~-r------~Hse~L~p~i~~~L~~a~~~~~dld~Iav~ 73 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRKG----------EDLF-EISYTGE-K------KHAEILPVVVKKLLDELDLKVKDLDVVGVG 73 (218)
T ss_dssp -CEEEEEECSSSEEEEEEET----------TEEE-EEEEESC-G------GGGGHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred ceEEEEEcCCcCeEEEEEEC----------CEEE-EEEecch-H------HHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 47999999999999999984 5666 3322111 1 112566778888999999999999998886
Q ss_pred ecCCCChhH---HHHHHHHHHhhCCCCceEEEeCcHHHHHhc
Q 019144 102 VSGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALAS 140 (345)
Q Consensus 102 ~pG~~~~~~---~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~ 140 (345)
-||.+-+. +....+-|.-.++ .|++=-|--.+.++.
T Consensus 74 -~GPGsfTGlRiG~~~Ak~La~~~~--iPl~gVs~l~a~a~~ 112 (218)
T 2a6a_A 74 -IGPGGLTGLRVGIATVVGLVSPYD--IPVAPLNSFEMTAKS 112 (218)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHGGGT--CCEEEECHHHHHHHT
T ss_pred -cCCCchHhHHHHHHHHHHHHHHcC--CCEEEeCcHHHHHhh
Confidence 36655443 3456788888887 898888877766553
No 94
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=89.48 E-value=6.8 Score=34.38 Aligned_cols=96 Identities=16% Similarity=0.072 Sum_probs=67.3
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
++|+||-....+.+++++. ++++.+.......+ .+.+..+|+++++++++...+|.+|+++
T Consensus 2 ~iL~idTs~~~~sval~~~----------~~~~~~~~~~~~~h--------~~~l~~~i~~~L~~a~~~~~did~Iav~- 62 (231)
T 2gel_A 2 RILAIDTATEACSVALWNN----------GTINAHFELCPREH--------TQRILPMVQEILAASGASLNEIDALAFG- 62 (231)
T ss_dssp EEEEEECSSSEEEEEEEET----------TEEEEEEEECCSCC--------HHHHHHHHHHHHHHTTCCGGGCSEEEEE-
T ss_pred eEEEEECCCcCeEEEEEEC----------CEEEEEEhhhhHHH--------HHHHHHHHHHHHHHcCCCHHHCCEEEEE-
Confidence 6899999999999999974 56666443222222 2457788889999999999999998886
Q ss_pred cCCCChhH---HHHHHHHHHhhCCCCceEEEeCcHHHHHh
Q 019144 103 SGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (345)
Q Consensus 103 pG~~~~~~---~~~l~~~L~~~~~~~~pV~v~NDa~~a~~ 139 (345)
-|+.+-+. .....+-|.-.++ .|++--|--.+.++
T Consensus 63 ~GPGsftglRig~~~ak~la~~~~--~Pl~~V~~l~a~a~ 100 (231)
T 2gel_A 63 RGPGSFTGVRIGIGIAQGLALGAN--LPMIGVSTLATMAQ 100 (231)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHTTT--CCEEEECHHHHHHH
T ss_pred cCCChhHhHHHHHHHHHHHHHHcC--CCEEEeccHHHHHH
Confidence 35544332 2355677777776 89887776665444
No 95
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=87.90 E-value=5.1 Score=41.77 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=59.7
Q ss_pred cEEEEEecC-ccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEE
Q 019144 22 EVILGLDGG-TTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (345)
Q Consensus 22 ~~~lgvDiG-~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igi 100 (345)
..++|+|=| .|.++++++|. +|+++.....-+..+. ...++..+ .+.+++.+.. +..|+|
T Consensus 329 ~~vlg~dpg~r~g~k~a~vd~---------~G~~l~~~~iy~~~~~-~~~~~~~~----~l~~li~~~~-----~~~IaI 389 (785)
T 3bzc_A 329 RATLGLDPGLRTGVKVAVVDA---------TGKLLDTATVYPHAPK-NQWDQTLA----VLAALCAKHQ-----VELIAI 389 (785)
T ss_dssp CCEEEEECCSSSCEEEEEECT---------TSCEEEEEEECCSGGG-CCHHHHHH----HHHHHHHHHT-----CCEEEE
T ss_pred CeEEEECCCCcCceEEEEECC---------CCCEEEEEEEecCCch-hHHHHHHH----HHHHHHHHcC-----CCEEEE
Confidence 489999999 69999999999 9999998776443231 23343444 4455555553 334445
Q ss_pred eecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHh
Q 019144 101 AVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALA 139 (345)
Q Consensus 101 g~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~ 139 (345)
|- |.-+.+...-+.+.+++.-....|+.+.|++-+-++
T Consensus 390 Gn-gtasret~~~v~~l~~~~~~~~i~~v~v~e~gArvy 427 (785)
T 3bzc_A 390 GN-GTASRETDKLAGELIKKYPGMKLTKIMVSEAGASVY 427 (785)
T ss_dssp ES-STTHHHHHHHHHHHHHHCGGGCCEEEEECCHHHHHH
T ss_pred CC-CccCHHHHHHHHHHHHhcccCCCCEEEEcCCcCCHH
Confidence 43 433444333344444443101278999999876544
No 96
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=84.09 E-value=3.6 Score=42.81 Aligned_cols=79 Identities=13% Similarity=0.154 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeC------CC
Q 019144 253 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIR------PK 326 (345)
Q Consensus 253 ~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~------~~ 326 (345)
..|...-+..++.|...+..+...... ..|+++||++++. + |++.+.+.+.+. ++++.. .+
T Consensus 668 dIAasFq~ala~~L~~~~~~a~~~~g~--------~~VvLsGGVa~N~--~-Lr~~L~~~l~~~--g~~v~~p~~~p~~D 734 (761)
T 3vth_A 668 YISAKFHNTVVNFTYDLANLIRKETGI--------NKVVLSGGSFQNR--Y-LLRRLIEKLSLS--GFEVYSNSKVPCND 734 (761)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC--------CEEEEESGGGGSH--H-HHHHHHHHHHHT--TCEEEECSSSCSSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--------CEEEEECcHHHHH--H-HHHHHHHHHHhC--CCEEEecCCCCCCc
Confidence 345555555666666666666666663 6899999999874 3 578888888765 233321 24
Q ss_pred CChHHHHHHHHHHhhhcc
Q 019144 327 VEPAVGAALLAWNSFMNA 344 (345)
Q Consensus 327 ~a~~~GAa~la~~~~~~~ 344 (345)
.+.++|.|+.+...+.+.
T Consensus 735 gGialGQA~~a~~~~~~~ 752 (761)
T 3vth_A 735 GGISLGQAVIANKILEGS 752 (761)
T ss_dssp GGHHHHHHHHHHHHHTST
T ss_pred hHHHHHHHHHHHHHhccC
Confidence 456799999988766543
No 97
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=84.01 E-value=9.2 Score=37.77 Aligned_cols=136 Identities=13% Similarity=0.104 Sum_probs=85.9
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcC-CCcccc
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSG-SNRSAV 95 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~~i 95 (345)
.+.+||+|+.++++.+++..+ ..-+++.+.+.+..- .... .++.+++..+++++|.+... ...+++
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~------~~~~~l~~~k~~vrLg~g~~~~g~L-s~eai~r~~~~L~~f~~~~~~~~v~~v 84 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVD------GAMQIIGRLKQRVHLADGLGPDNML-SEEAMTRGLNCLSLFAERLQGFSPASV 84 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEET------TEEEEEEEEEECCCTGGGBCTTCCB-CHHHHHHHHHHHHHHHHHTTTCCGGGE
T ss_pred eEEEEEeccccEEEEEEEEcC------CeeEEEEeeEEEEeccCcccccCCc-CHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 689999999999999999721 012344444433210 0112 25688888899999888763 333344
Q ss_pred ceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHH---Hhcc--cCC-CCCeEEEEeCccceeeeecCCCCeE
Q 019144 96 RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG--TMG-KLHGCVLIAGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 96 ~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a---~~~~--~~g-~~~~v~v~~GTG~~g~gi~~dG~~~ 169 (345)
. .++++.+=+......+.+.+++.++ .++.|-+.-.=| .+|. ... ..+.+++=+|.|+.-..+..++++.
T Consensus 85 ~--~vATsA~R~A~N~~~fl~~i~~~tG--~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~ 160 (513)
T 1u6z_A 85 C--IVGTHTLRQALNATDFLKRAEKVIP--YPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI 160 (513)
T ss_dssp E--EEECHHHHHCTTHHHHHHHHTTTCS--SCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE
T ss_pred E--EEecHHHHcCcCHHHHHHHHHHHHC--CCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee
Confidence 3 4566655222334568889999998 888888876533 2332 122 2367888899998776665566654
No 98
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=82.33 E-value=6.8 Score=42.12 Aligned_cols=99 Identities=11% Similarity=0.115 Sum_probs=58.9
Q ss_pred cEEEEEecCc-----cceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 019144 22 EVILGLDGGT-----TSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (345)
Q Consensus 22 ~~~lgvDiG~-----t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~ 96 (345)
..++|+|-|- |.++++++|. +|+++......+..+.....+... +.+.+++.+.. +.
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~---------~G~~l~~~~i~~~~~~~~~~~~~~----~~l~~li~~~~-----~~ 580 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIVDNPFDKTNPEKFE----DTLDNIIQSCQ-----PN 580 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECT---------TSCEEEEEEECSCTTCSSCCHHHH----HHHHHHHHHHC-----CS
T ss_pred CeEEEecCCCCCCCCCCeEEEEECC---------CCCEEEEEEEcCCCCChhhHHHHH----HHHHHHHHHcC-----Cc
Confidence 3799999984 3799999999 999999887642211112223333 44555565553 44
Q ss_pred eeEEeecCCCChhHH--HHHHHHHHhh-C----CCCceEEEeCcHHHHHhc
Q 019144 97 AVCLAVSGVNHPTDQ--QRILNWLRDI-F----PGNVRLYVHNDALAALAS 140 (345)
Q Consensus 97 ~Igig~pG~~~~~~~--~~l~~~L~~~-~----~~~~pV~v~NDa~~a~~~ 140 (345)
.|+||- ....... ..+.+.+++. + +..++|.+.|++-+.++.
T Consensus 581 ~IaIGn--~s~et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAsvYs 629 (1030)
T 3psf_A 581 AIGING--PNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 629 (1030)
T ss_dssp EEEECC--SSTHHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHHHHH
T ss_pred EEEECC--CCHHHHHHHHHHHHHHHhhccccccCCCccEEEecchHHHHHH
Confidence 556653 2222221 2455555543 1 112689999999887664
No 99
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=81.71 E-value=11 Score=35.07 Aligned_cols=138 Identities=15% Similarity=0.062 Sum_probs=80.8
Q ss_pred ccccCCccEEEEEecCccceeeEEEcCccCCCCCCCCC--CeeEEEecCCCCc------cccCHHHHHHHHHHHHHHHHH
Q 019144 15 AEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNH------NSVGEDAARETIEKVMADALL 86 (345)
Q Consensus 15 ~~~~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g--~i~~~~~~~~~~~------~~~~~~~~~~~l~~~i~~~~~ 86 (345)
.|+-.+ ..+..||+|++++++.+++..+ ++ +++.+.+.+..-. ... .++.+++..+++++|.+
T Consensus 10 ~~~~~~-~~~A~IDiGSNsiRL~I~~~~~-------~~~~~~i~~~k~~vrLg~g~~~~g~l-s~eai~r~~~aL~~f~~ 80 (343)
T 3cer_A 10 HMSKES-VTVAGIDCGTNSIRLKIARVDA-------DGMHEVVPRILRVIRLGQDVDKTHRF-ADEALERAYVAAREFAG 80 (343)
T ss_dssp ----CC-EEEEEEEECSSCEEEEEEEEET-------TEEEEEEEEEEECCCTTTTHHHHSSC-CHHHHHHHHHHHHHHHH
T ss_pred ccCCCC-CeEEEEEcccceeEeEEEEEcC-------CCCEEEEEEEEEEeeCCCCccccCCc-CHHHHHHHHHHHHHHHH
Confidence 344443 4788999999999999999721 12 3344433322100 111 24678888888888877
Q ss_pred HcCC-CccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHH---HHHhcc--cCC----CCCeEEEEeCcc
Q 019144 87 KSGS-NRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDAL---AALASG--TMG----KLHGCVLIAGTG 156 (345)
Q Consensus 87 ~~~~-~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~---~a~~~~--~~g----~~~~v~v~~GTG 156 (345)
.... ...++ ..++++.+=+......+.+.+++.++ .++.|-+.-. +..++. ... ..+.+++=+|.|
T Consensus 81 ~~~~~~v~~v--~~vATsA~R~A~N~~~fl~~v~~~tG--i~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGG 156 (343)
T 3cer_A 81 VIAEHPIDGL--RFVATSATRDAENREEFEDEIERILG--VRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGG 156 (343)
T ss_dssp HHTTSCCSEE--EEEECHHHHHCTTHHHHHHHHHHHHS--SCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSS
T ss_pred HHHHCCCCeE--EEEecHHHHcCcCHHHHHHHHHHHHC--CCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCC
Confidence 6532 22233 34666665222234568888999987 7877777665 233332 122 245788889999
Q ss_pred ceeeeecCC
Q 019144 157 TIAYGFTED 165 (345)
Q Consensus 157 ~~g~gi~~d 165 (345)
+.-..+..+
T Consensus 157 Stel~~~~~ 165 (343)
T 3cer_A 157 STELVIGGD 165 (343)
T ss_dssp CEEEEECCC
T ss_pred ceEEEEeec
Confidence 866655444
No 100
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=81.68 E-value=0.9 Score=43.94 Aligned_cols=68 Identities=19% Similarity=0.150 Sum_probs=51.7
Q ss_pred hHHHHHHHHcC------CHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCCCCCCccEEEEcCcccCcccccchHHHHH
Q 019144 241 VPVVVSCAEAG------DEVANKILQDSVEELALSVKAVVQRLS---LSGEDGKHSFPLVMVGGVLEANRRWDIGREVVK 311 (345)
Q Consensus 241 ~~~v~~~a~~g------D~~a~~il~~~~~~Lg~~l~~lv~~ld---~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~ 311 (345)
.++|.+.+.+| |+.|+.+++-++..+.+.|......|+ | ....+.||+.||+.++...+ ++.+.+
T Consensus 302 ~R~i~~~~~~g~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~~~~~----~G~vDaIVFTGGIGEns~~i--R~~i~~ 375 (438)
T 4h0p_A 302 FGHIIQNLDPSKCSEEDHEKAKLTYAVFLDRLLNFVAQYLFKLLSEVP----IESIDGLVFSGGIGEKGAEL--RRDVLK 375 (438)
T ss_dssp HHHHHHTTSTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC----GGGSCEEEEEHHHHHHCHHH--HHHHHH
T ss_pred HHHHHHhhhccCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccc----CCCCCEEEECCccccCcHHH--HHHHHH
Confidence 45666666665 999999999999999999999998885 0 00148999999998776543 777766
Q ss_pred HHH
Q 019144 312 CIL 314 (345)
Q Consensus 312 ~l~ 314 (345)
.+.
T Consensus 376 ~l~ 378 (438)
T 4h0p_A 376 KLA 378 (438)
T ss_dssp HTG
T ss_pred hHh
Confidence 664
No 101
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=81.31 E-value=8.2 Score=38.08 Aligned_cols=137 Identities=12% Similarity=0.077 Sum_probs=83.3
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCC--C----ccccCHHHHHHHHHHHHHHHHHHcC-CCccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS--N----HNSVGEDAARETIEKVMADALLKSG-SNRSA 94 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~--~----~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~~ 94 (345)
..+-.||+|+.++++.+++..+ ....++.+.+.... . .... .++.+++..+++++|.+... ...++
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~------~~~~~~~~~k~~vrLg~gl~~~g~L-s~eai~r~~~~L~~F~~~~~~~~v~~ 87 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLS------RAPAVLFNEKVLCGLGKGLALTGRM-HEEGVTRALMALRRFHVLSEQAQAQK 87 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSS------SSCCEEEEEEEECCTTTTHHHHSSC-CHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred CeEEEEEECCccEEEEEEEEcC------CCceEEEEEeEEeecccCccccCCc-CHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 4789999999999999999731 12345555432211 0 0111 24567777777777655432 22233
Q ss_pred cceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHH---Hhccc--CCCCCeEEEEeCccceeeeecCCCCeE
Q 019144 95 VRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASGT--MGKLHGCVLIAGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 95 i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a---~~~~~--~g~~~~v~v~~GTG~~g~gi~~dG~~~ 169 (345)
+. .++++.+=+......+.+.+++.++ .++.|-+.-.=| ..|.. ....+.+++=+|.|+.-..+..++++.
T Consensus 88 v~--~vATsA~R~A~N~~~fl~~i~~~tG--~~ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~ 163 (508)
T 3hi0_A 88 LY--VLATAAAREAENGPDFIREAEAILG--CEIEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG 163 (508)
T ss_dssp EE--EEECTHHHHSTTHHHHHHHHHHHHT--SCEEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC
T ss_pred EE--EEeeHHHHcCcCHHHHHHHHHHHHC--CCeEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee
Confidence 43 4566655222334568888999998 888888776532 23321 233467888899998777666666653
No 102
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=80.93 E-value=26 Score=34.45 Aligned_cols=93 Identities=16% Similarity=0.062 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCCCeEEEE
Q 019144 74 RETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLI 152 (345)
Q Consensus 74 ~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~~~v~v~ 152 (345)
|+.+.++++-++.+ .++++..-..|-+..|=...+..+..+.+.+-+.|+. ..+++.+.+.+++++. |...+++|=
T Consensus 92 wd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~v-pav~l~~~~vlalya~--G~~tglVVD 168 (498)
T 3qb0_A 92 WDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQF-EACYLAPTSTCVSFAA--GRPNCLVVD 168 (498)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCC-SEEEEEEHHHHHHHHH--TCSSEEEEE
T ss_pred HHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCC-CeEeecchHHHHHHHc--CCCeEEEEE
Confidence 55666666666654 4444332214667777666665666788888788873 4599999999988863 345688999
Q ss_pred eCccceeeeecCCCCeE
Q 019144 153 AGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 153 ~GTG~~g~gi~~dG~~~ 169 (345)
+|.|..-...+.+|.+.
T Consensus 169 iG~g~T~vvPI~~G~~l 185 (498)
T 3qb0_A 169 IGHDTCSVSPIVDGMTL 185 (498)
T ss_dssp ECSSCEEEEEEETTEEC
T ss_pred cCCCcEEEEEEeCCEEc
Confidence 99887555556777664
No 103
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=80.66 E-value=1.7 Score=40.56 Aligned_cols=32 Identities=22% Similarity=0.065 Sum_probs=26.5
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEec
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAA 60 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~ 60 (345)
|..++|++|-|+|++|+-++|. +|+++.+.+.
T Consensus 5 ~~~~~IavDWGTSnlRa~l~~~---------~g~vl~~~~~ 36 (330)
T 3t69_A 5 TAGYYAAVDWGTSSFRLWIIGE---------DGAVLAERRS 36 (330)
T ss_dssp ---CEEEEEECSSCEEEEEECT---------TSCEEEEEEE
T ss_pred CCCCEEEEEecchheehheecC---------CCCchhhhcC
Confidence 3458999999999999999998 8999998764
No 104
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=80.22 E-value=1.9 Score=39.68 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=29.2
Q ss_pred ccCCccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecC
Q 019144 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (345)
Q Consensus 17 ~~~~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~ 61 (345)
+|.|..++|++|-|+|++|+-++|. ++++.+.+.+
T Consensus 1 ~~~m~~~~IavDWGTs~lRa~l~~~----------g~vl~~~~~~ 35 (295)
T 3nuw_A 1 SNAMTARYIAIDWGSTNLRAWLYQG----------EECLESRQSE 35 (295)
T ss_dssp CCGGGCEEEEEEECSSCEEEEEEET----------TEEEEEEEES
T ss_pred CCCCCccEEEEEecchheeeeeecC----------CceehhhcCC
Confidence 3667789999999999999999983 7888887643
No 105
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=78.25 E-value=11 Score=41.28 Aligned_cols=99 Identities=11% Similarity=0.115 Sum_probs=59.1
Q ss_pred cEEEEEecCc-----cceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 019144 22 EVILGLDGGT-----TSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (345)
Q Consensus 22 ~~~lgvDiG~-----t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~ 96 (345)
..++|+|-|- |.++++++|. +|+++......+..+.....+... +.+.+++.+.. +.
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~---------~G~vl~~~~i~~~~~~~~~~~~a~----~~l~~li~~~~-----~~ 577 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIVDNPFDKTNPEKFE----DTLDNIIQSCQ-----PN 577 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECT---------TSCEEEEEEECSCTTCSSCSHHHH----HHHHHHHHHHC-----CS
T ss_pred CeEEEecCCCCCCCCCceEEEEECC---------CCCEEEEEEEcCCCCChhhHHHHH----HHHHHHHHHcC-----Cc
Confidence 3899999984 3799999999 999999887632211112233333 34555565553 44
Q ss_pred eeEEeecCCCChhHH--HHHHHHHHhh-C----CCCceEEEeCcHHHHHhc
Q 019144 97 AVCLAVSGVNHPTDQ--QRILNWLRDI-F----PGNVRLYVHNDALAALAS 140 (345)
Q Consensus 97 ~Igig~pG~~~~~~~--~~l~~~L~~~-~----~~~~pV~v~NDa~~a~~~ 140 (345)
.|+||- ....... ..+.+.+++. + +..++|.+.|++-+.++.
T Consensus 578 vIaIGn--~sret~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~gAsvYs 626 (1219)
T 3psi_A 578 AIGING--PNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 626 (1219)
T ss_dssp EEEECC--SSTHHHHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTTHHHHH
T ss_pred EEEECC--CCHHHHHHHHHHHHHHHhhccccccCCCccEEEECchHHHHHh
Confidence 556653 2222221 2455555542 1 112689999999887664
No 106
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=77.45 E-value=58 Score=32.12 Aligned_cols=95 Identities=14% Similarity=0.016 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcc-c-CC-
Q 019144 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-T-MG- 144 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~-~-~g- 144 (345)
+|+++...+.+.+.+..++ .+ ..+..+.|++|-..+......+++..+. .++ ..+.+.|+..+|+++- . ..
T Consensus 115 sp~ei~a~~L~~lk~~ae~~lg---~~v~~~VitVPa~f~~~qr~a~~~A~~~-AGl-~~~~li~EP~AAAlay~~~~~~ 189 (554)
T 1yuw_A 115 YPEEVSSMVLTKMKEIAEAYLG---KTVTNAVVTVPAYFNDSQRQATKDAGTI-AGL-NVLRIINEPTAAAIAYGLDKKV 189 (554)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHS---SCCCEEEEEECTTCCHHHHHHHHHHHHT-TTC-EEEEEEEHHHHHHHHTTCSTTC
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-CeEEEeCcHHHHHHHHHhhccC
Confidence 4677666665555544332 23 2467789999998876665566665544 343 5789999999887642 1 11
Q ss_pred --CCCeEEEEeCccceeeeecC--CCCe
Q 019144 145 --KLHGCVLIAGTGTIAYGFTE--DGRD 168 (345)
Q Consensus 145 --~~~~v~v~~GTG~~g~gi~~--dG~~ 168 (345)
....+++=+|.|..-..++. +|.+
T Consensus 190 ~~~~~vlV~D~GgGT~Dvsv~~~~~g~~ 217 (554)
T 1yuw_A 190 GAERNVLIFDLGGGTFDVSILTIAAGIF 217 (554)
T ss_dssp SSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CCCcEEEEEEcCCCeEEEEEEEEcCCcE
Confidence 12345566787765555543 5654
No 107
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=77.15 E-value=4.9 Score=40.27 Aligned_cols=62 Identities=16% Similarity=0.151 Sum_probs=44.7
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSN 91 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 91 (345)
.++.|+|||.|+|.+++-+.+. .+-+++.....++.-. .+.-.-+..+.+.+++++++++..
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~------g~i~~l~~g~~~ttGi--KGt~~Ni~g~~~si~~a~~~a~~~ 63 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYP------QARAFVASGIVATTGM--KGTRDNIAGTLAALEQALAKTPWS 63 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBT------TBCCCCEEEEEECCSS--TTSGGGHHHHHHHHHHHHTTSSCC
T ss_pred cEEEEEEecCceEEEEEEEEcC------CeEEEEEeecccCCcc--ceeeeCHHHHHHHHHHHHHHhCCc
Confidence 5999999999999999877620 1346788877776654 243445666777788888877765
No 108
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=74.62 E-value=7.5 Score=38.84 Aligned_cols=67 Identities=21% Similarity=0.170 Sum_probs=45.6
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.++.|+|||-+.|.+++.+.++ ..+-+.+.....+++... +..+-+.-+.+.+++++++.+.+.+++
T Consensus 2 ~~i~gvdign~tte~~la~~~~-----~~~~~f~~s~~~~ttg~k--gt~~n~~g~~~~l~~~~~~~~~~~~~~ 68 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDE-----AGALTITHSALAETTGIK--GTLRNVFGIQEALALVARGAGIAVSDI 68 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECT-----TCCEEEEEEEEEECCSST--TSTTHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred cEEEEEecCCcchheeeeeecC-----CCceEEeeccccccCCcc--CcHHHHHHHHHHHHHHHHHcCCChhhc
Confidence 5899999999999988876520 002356667666666543 444456677788888888888765443
No 109
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=71.83 E-value=6.1 Score=41.16 Aligned_cols=78 Identities=15% Similarity=0.095 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCc-e--eeCCCCC-hH
Q 019144 255 ANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGA-V--PIRPKVE-PA 330 (345)
Q Consensus 255 a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~-~--i~~~~~a-~~ 330 (345)
|...=+...+.|...+..+..... ...|+++||++.+. + |.+.+.+.+++..-.+ . -++..++ -+
T Consensus 682 AasfQ~al~~~L~~~~~~a~~~tg--------~~~VvLSGGVa~N~--~-L~~~l~~~L~~~G~~v~~p~~vP~nDgGiA 750 (772)
T 4g9i_A 682 AYSAHLALARAFAHTAVERAREFG--------VKNVALSGGVAYNE--L-ITKMIRKVVEANGLNFHVTTEVPRGDNGVN 750 (772)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT--------CSCCCEESSTTCCH--H-HHHHHHHHGGGSSCCCCCCTTSCSSGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC--------cCEEEEEchHHHHH--H-HHHHHHHHHHHCCCEEEccCCCCCCcchHH
Confidence 333333444455555555555555 36899999999874 3 4778888887752111 1 1123444 57
Q ss_pred HHHHHHHHHhhhc
Q 019144 331 VGAALLAWNSFMN 343 (345)
Q Consensus 331 ~GAa~la~~~~~~ 343 (345)
+|.|++|...+.+
T Consensus 751 LGQA~iA~~~L~~ 763 (772)
T 4g9i_A 751 VGQAFLGGLYLEG 763 (772)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999998876643
No 110
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=70.71 E-value=1.1 Score=41.15 Aligned_cols=32 Identities=16% Similarity=-0.006 Sum_probs=9.4
Q ss_pred eecCCCCeEEeccCCCCcCCc-CcHHHHHHHHH
Q 019144 161 GFTEDGRDARAAGAGPILGDW-GSGYGIAAQAL 192 (345)
Q Consensus 161 gi~~dG~~~~~Gg~G~~~gd~-G~a~~iG~~~~ 192 (345)
|-+..|.-..+||+||+..+. |..|.||++.|
T Consensus 152 G~l~~G~~g~aGEiGh~~v~~~g~~C~cG~~Gc 184 (310)
T 3htv_A 152 GAPWTGAHGVAGELGHIPLGDMTQHCACGNPGC 184 (310)
T ss_dssp TEEECCSSSCCCC--------------------
T ss_pred CEEeecCCCCceeCcceEeCCCCCcCCCCCCce
Confidence 344568777899999998755 56799998865
No 111
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=65.67 E-value=15 Score=30.35 Aligned_cols=57 Identities=14% Similarity=0.079 Sum_probs=38.7
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCC---eeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLP---VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSN 91 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~---i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 91 (345)
.+||||-|.+++=+++++. +++ .+......+. . .+..+-+..+.+-+.+++++..++
T Consensus 2 ~ILGIDPGl~~tG~gvi~~---------~g~~~~~v~~G~i~t~-~--~~~~~Rl~~i~~~l~~~i~~~~Pd 61 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQ---------VGRQLSYLGSGCIRTK-V--DDLPSRLKLIYAGVTEIITQFQPD 61 (158)
T ss_dssp EEEEEECCSSEEEEEEEEE---------ETTEEEEEEEEEEECC-C--SCHHHHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEEccCCCCeeEEEEEe---------cCCeEEEEEeeEEECC-C--CCHHHHHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999997 454 3333333232 1 344556677777778888877543
No 112
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=65.55 E-value=28 Score=28.97 Aligned_cols=57 Identities=18% Similarity=0.121 Sum_probs=39.4
Q ss_pred EEEEEecCccceeeEEEcCccCCCCCCCCCC------eeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCC
Q 019144 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLP------VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGS 90 (345)
Q Consensus 23 ~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~------i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 90 (345)
.+||||-|.+++=+++++. .++ .+......++.. .+..+-+..|.+-+.+++++..+
T Consensus 2 rILGIDPGl~~tG~gvi~~---------~g~~~~~~~~v~~G~I~t~~~--~~~~~RL~~I~~~l~~~i~~~~P 64 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV---------EGKGALKARLLHGEVVKTSPQ--EPAKERVGRIHARVLEVLHRFRP 64 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE---------CSSSSSCEEEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEccccCceEEEEEEe---------cCCccceEEEEEeCeEECCCC--CCHHHHHHHHHHHHHHHHHHhCC
Confidence 6899999999999999998 454 333333323221 35566677777778888877654
No 113
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=65.01 E-value=56 Score=32.21 Aligned_cols=97 Identities=16% Similarity=0.187 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHH-cCCCcccc--ceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCC
Q 019144 70 EDAARETIEKVMADALLK-SGSNRSAV--RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKL 146 (345)
Q Consensus 70 ~~~~~~~l~~~i~~~~~~-~~~~~~~i--~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~ 146 (345)
.-+.|+.+.++++.++.+ .++++... ..+-+..|=...+.....+.+.|=+.|++ ..+++.+++.+++++ .|..
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~-pa~~~~~~~vla~ya--~G~~ 246 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGF-SGIVVHQESVCATYG--SGLS 246 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHH--HTCS
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCC-CeEEeechHHHHHHH--CCCC
Confidence 466888999998888864 56666543 35778888888777777889999999984 459999999999886 3556
Q ss_pred CeEEEEeCccceeeeecCCCCeE
Q 019144 147 HGCVLIAGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 147 ~~v~v~~GTG~~g~gi~~dG~~~ 169 (345)
.+++|=+|.+..-..-+.||.+.
T Consensus 247 tglVVDiG~~~T~v~PV~dG~~l 269 (593)
T 4fo0_A 247 STCIVDVGDQKTSVCCVEDGVSH 269 (593)
T ss_dssp EEEEEEECSSCEEEEEEESSCBC
T ss_pred ceEEEEeCCCceeeeeeECCEEe
Confidence 78999999886444446888764
No 114
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=64.67 E-value=62 Score=32.31 Aligned_cols=90 Identities=17% Similarity=0.056 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcc-c-CC-
Q 019144 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-T-MG- 144 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~-~-~g- 144 (345)
+++++...+.+.+.+..+. .+ ..+..+.|++|-..+......+++..+.. ++ ..+.+.|+..+|+++- . ..
T Consensus 111 ~~~ei~a~~L~~l~~~ae~~l~---~~v~~~VitVPa~f~d~qr~a~~~A~~~A-Gl-~v~~li~EP~AAAlay~l~~~~ 185 (605)
T 2kho_A 111 APPQISAEVLKKMKKTAEDYLG---EPVTEAVITVPAYFNDAQRQATKDAGRIA-GL-EVKRIINEPTAAALAYGLDKGT 185 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHC---SCCCEEEEEECTTCCHHHHHHHHHHHHTT-TC-EEEEEEEHHHHHHHHTTTTSSS
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEEECCCCCHHHHHHHHHHHHHc-CC-ceEEEecCHHHHHHHhhhcccC
Confidence 5666655555544443332 23 24667889999987765555666655443 42 5789999999887742 1 11
Q ss_pred -CCCeEEEEeCccceeeeec
Q 019144 145 -KLHGCVLIAGTGTIAYGFT 163 (345)
Q Consensus 145 -~~~~v~v~~GTG~~g~gi~ 163 (345)
....+++=+|.|..-..++
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 2kho_A 186 GNRTIAVYDLGGGTFDISII 205 (605)
T ss_dssp SEEEEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEE
Confidence 1224555577776554454
No 115
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=63.96 E-value=10 Score=30.83 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=33.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccccceeEEeecC
Q 019144 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSG 104 (345)
Q Consensus 68 ~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~pG 104 (345)
-+++++++...+++++++++.++.+++|..|-+.+.=
T Consensus 44 Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT~ 80 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVTK 80 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCC
Confidence 4789999999999999999999999999999998654
No 116
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=62.54 E-value=18 Score=36.87 Aligned_cols=85 Identities=11% Similarity=0.079 Sum_probs=50.1
Q ss_pred HHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCC
Q 019144 242 PVVVSCAEAGD---EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYP 318 (345)
Q Consensus 242 ~~v~~~a~~gD---~~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~ 318 (345)
..+...+.+|. ..|...-+..++.|...+..+..... ...|+++||++++. + |++.+.+.+.
T Consensus 560 ~l~~~ll~~g~~~~dIAasFh~ala~~L~~~~~ra~~~~g--------~~~VvLsGGV~~N~--~-Lre~L~~~l~---- 624 (657)
T 3ttc_A 560 TFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRG--------ITTLVFSGGVIHNR--L-LRARLAHYLA---- 624 (657)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTT--------CCEEEEESGGGGCH--H-HHHHHHHHTT----
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCEEEEECcHHHHH--H-HHHHHHHHhC----
Confidence 33433434443 33445555555555555555555555 36899999999764 2 4667777665
Q ss_pred CceeeC------CCCChHHHHHHHHHHhh
Q 019144 319 GAVPIR------PKVEPAVGAALLAWNSF 341 (345)
Q Consensus 319 ~~~i~~------~~~a~~~GAa~la~~~~ 341 (345)
++++.. .+.+.++|.++.+..+.
T Consensus 625 g~~v~~p~~~p~~DnGiaLGQA~~a~~~~ 653 (657)
T 3ttc_A 625 DFTLLFPQSLPAGDGGLSLGQGVIAAARW 653 (657)
T ss_dssp TSEEECCCSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCEEEecCCCCCCcHHHHHHHHHHHHHHH
Confidence 334332 24556799998886543
No 117
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=61.44 E-value=61 Score=32.94 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHHHHHHHH--HcCCCccc--cceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCC
Q 019144 69 GEDAARETIEKVMADALL--KSGSNRSA--VRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG 144 (345)
Q Consensus 69 ~~~~~~~~l~~~i~~~~~--~~~~~~~~--i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g 144 (345)
+.++.|+.+.++++.++. +.++++.. =..+-+..|=...+.....+.+.+-+.|++ ..+++.+++.+++++. |
T Consensus 191 s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgv-pavyl~~qavlAlyas--G 267 (655)
T 4am6_A 191 SLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQF-QAVAIIQESLATCYGA--G 267 (655)
T ss_dssp SHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCC-SEEEEEEHHHHHHHHS--C
T ss_pred cccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCC-CeeeeccHHHHHHHhC--C
Confidence 456778999999988886 45665531 235777888777666677888888888973 4699999999988863 4
Q ss_pred -CCCeEEEEeCccceeeeecCCCCeE
Q 019144 145 -KLHGCVLIAGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 145 -~~~~v~v~~GTG~~g~gi~~dG~~~ 169 (345)
...+++|=+|.|..-..-+.+|.+.
T Consensus 268 l~ttGLVVDiG~g~T~VvPV~eG~vl 293 (655)
T 4am6_A 268 ISTSTCVVNIGAAETRIACVDEGTVL 293 (655)
T ss_dssp CSSCEEEEEECSSCEEEEEEETTEEC
T ss_pred CCCceEEEcCCCceEEEEEEeCCEEE
Confidence 3578999999887555556777654
No 118
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=58.30 E-value=3.5 Score=39.12 Aligned_cols=70 Identities=20% Similarity=0.287 Sum_probs=16.4
Q ss_pred eeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccCCCCCeEEEEeCccceeeeecCCCCeE
Q 019144 97 AVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 97 ~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~g~~~~v~v~~GTG~~g~gi~~dG~~~ 169 (345)
.+-+..|-...+.....+.+.+-+.|+. ..+++.+++.+++++. |...+++|=+|.|..-...+.+|.+.
T Consensus 106 ~vllt~p~~~~~~~r~~~~e~~fe~~~~-~~~~~~~~~~~a~~a~--g~~~~lVVDiG~g~T~v~pv~~G~~~ 175 (394)
T 1k8k_B 106 KILLTEPPMNPTKNREKIVEVMFETYQF-SGVYVAIQAVLTLYAQ--GLLTGVVVDSGDGVTHICPVYEGFSL 175 (394)
T ss_dssp ---------------------------------------------------CCEEEECSSCEEEECEETTEEC
T ss_pred cEEEEECCCCCHHHHHHHHHHhhhccCC-CeEEEEhhHHHHHHhC--CCceEEEEEcCCCceEeeeeECCEEc
Confidence 3556666655444444566666666762 3489999999888752 44577888898887555566788765
No 119
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=56.47 E-value=38 Score=33.21 Aligned_cols=74 Identities=16% Similarity=0.035 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChH
Q 019144 254 VANKILQDSVEELALSVKAVVQR---LSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPA 330 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~---ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~ 330 (345)
.++.+++-.+-.+...+..+-.. ..+ +..|++.||..++ +.| .+ +..-+... ++.+.....+++
T Consensus 397 l~RAvlEgia~~~r~~l~~l~~~~~~~g~-------~~~i~~~GGgaks-~~~--~Q-i~ADvlg~--pV~~~~~~e~~a 463 (520)
T 4e1j_A 397 FARAALEAVCYQTRDLLEAMHKDWRRNGN-------DTVLRVDGGMVAS-DWT--MQ-RLSDLLDA--PVDRPVILETTA 463 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC------------CCEEEESGGGGC-HHH--HH-HHHHHHTS--CEEEESCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCC-------cceEEEeCccccC-HHH--HH-HHHHHhCC--eEEecCCCccHH
Confidence 34555555555555544443332 112 4678888987643 433 43 33333321 244444567889
Q ss_pred HHHHHHHHHh
Q 019144 331 VGAALLAWNS 340 (345)
Q Consensus 331 ~GAa~la~~~ 340 (345)
+|||++|...
T Consensus 464 lGAA~lA~~a 473 (520)
T 4e1j_A 464 LGVAWLAGSR 473 (520)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998643
No 120
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=56.08 E-value=37 Score=33.29 Aligned_cols=74 Identities=15% Similarity=0.085 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHH
Q 019144 255 ANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAA 334 (345)
Q Consensus 255 a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa 334 (345)
++.+++-.+..+...+..+-. .. ..+..|++.||..++ +.| .+.+ .-+... ++.+.....++++|||
T Consensus 400 ~RAvlEgia~~~r~~l~~l~~-~g------~~~~~i~~~GGgaks-~~~--~Qi~-ADvlg~--pV~~~~~~e~~alGAA 466 (515)
T 3i8b_A 400 ARAFVEGLLCSQRDCLELIRS-LG------ASITRILLIGGGAKS-EAI--RTLA-PSILGM--DVTRPATDEYVAIGAA 466 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TT------CCCCEEEEESGGGGC-HHH--HHHH-HHHHTS--CEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cC------CCCCEEEEECchhcC-HHH--HHHH-HHHhCC--ceEecCCcccHHHHHH
Confidence 445555544444444433322 12 235789999997743 433 3333 333321 2444345667899999
Q ss_pred HHHHHhh
Q 019144 335 LLAWNSF 341 (345)
Q Consensus 335 ~la~~~~ 341 (345)
++|...+
T Consensus 467 ~lA~~a~ 473 (515)
T 3i8b_A 467 RQAAWVL 473 (515)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9987544
No 121
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=55.69 E-value=82 Score=30.03 Aligned_cols=94 Identities=20% Similarity=0.263 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHH-cCCCccccceeEEeecCCCChhHHHHHHHHHHhhCCCCceEEEeCcHHHHHhcccC------CCC
Q 019144 74 RETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM------GKL 146 (345)
Q Consensus 74 ~~~l~~~i~~~~~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pV~v~NDa~~a~~~~~~------g~~ 146 (345)
|+.+.++++.++.+ .+.++.. ..+-+..|=...+..+..+.+.+-+.|+. ..+++.+++.+++++... +..
T Consensus 102 wd~~e~iw~~~~~~~L~v~~~~-~pvlltep~~~~~~~re~~~ei~FE~~~~-p~v~l~~~~vla~~a~G~~~~~~~~~~ 179 (427)
T 3dwl_A 102 WDHMERFWQQSLFKYLRCEPED-HYFLLTEPPLNPPENRENTAEIMFESFNC-AGLYIAVQAVLALAASWTSSKVTDRSL 179 (427)
T ss_dssp HHHHHHHHHHHHHTTSCCCGGG-CEEEEEECTTCCHHHHHHHHHHHTTTTCC-SEEEEEEHHHHHHHGGGGSTTTCSCCC
T ss_pred HHHHHHHHHHHHhHhhCCCCcC-CcEEEEcCCCCCHHHHHHHHHHHHHhccC-ceeeecchHHHHHHhcCCcccccCCCc
Confidence 45666666666543 3444432 36777777777666667788888788873 459999999999886431 135
Q ss_pred CeEEEEeCccceeeeecCCCCeE
Q 019144 147 HGCVLIAGTGTIAYGFTEDGRDA 169 (345)
Q Consensus 147 ~~v~v~~GTG~~g~gi~~dG~~~ 169 (345)
.+++|=+|.|..-...+.+|.+.
T Consensus 180 tglVVDiG~g~T~v~PV~~G~~l 202 (427)
T 3dwl_A 180 TGTVVDSGDGVTHIIPVAEGYVI 202 (427)
T ss_dssp CEEEEEESSSCEEEEEEETTEEC
T ss_pred eEEEEECCCCceEEEEEECCEEe
Confidence 78999999887655567788765
No 122
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=54.99 E-value=24 Score=31.95 Aligned_cols=66 Identities=12% Similarity=0.203 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCC----ceee-CCCCChH
Q 019144 256 NKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG----AVPI-RPKVEPA 330 (345)
Q Consensus 256 ~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~----~~i~-~~~~a~~ 330 (345)
.++++...+.+...+...+..++ ++..||+.||... + +++.+.+.++. +.+. .+..+.+
T Consensus 249 ~~~i~~~~~~~~~~i~~~i~~~~-------~~~~vvl~GGga~-------l--l~~~l~~~~~~~~~~~~~~~~P~~a~A 312 (320)
T 2zgy_A 249 TEAMNEALRKLEQRVLNTLNEFS-------GYTHVMVIGGGAE-------L--ICDAVKKHTQIRDERFFKTNNSQYDLV 312 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC-------CCCEEEEESTTHH-------H--HHHHHHHTSCCCGGGEECCSCGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-------CCCeEEEECChHH-------H--HHHHHHHHhCCCCCceeeCCCcHHHHH
Confidence 34555555555555555444432 2578999999652 1 55566666553 2222 2467889
Q ss_pred HHHHHHH
Q 019144 331 VGAALLA 337 (345)
Q Consensus 331 ~GAa~la 337 (345)
+||+.++
T Consensus 313 ~G~~~~~ 319 (320)
T 2zgy_A 313 NGMYLIG 319 (320)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9998764
No 123
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=54.92 E-value=30 Score=33.63 Aligned_cols=67 Identities=24% Similarity=0.121 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHHHh
Q 019144 264 EELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 340 (345)
Q Consensus 264 ~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~~~ 340 (345)
+.++..+..++..+.. .. .++.|++.||..++ +.| .+.+ ..+... ++.+.....++++|||++|...
T Consensus 375 Egia~~~~~~l~~l~~---~~-~~~~i~~~GG~a~s-~~~--~Qi~-Adv~g~--pV~~~~~~e~~alGaA~lA~~~ 441 (497)
T 2zf5_O 375 EAIAYLTRDVVDEMEK---LV-QIKELRVDGGATAN-DFL--MQFQ-ADILNR--KVIRPVVKETTALGAAYLAGLA 441 (497)
T ss_dssp HHHHHHHHHHHHHHTT---TS-CCCCEEEESGGGGC-HHH--HHHH-HHHHTS--CEEEESCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh---cC-CcceEEEeCccccC-HHH--HHHH-HhhcCC--eEEEcCCCcchHHHHHHHHHHH
Confidence 3344444444554531 11 25779999998754 333 4333 333321 2333344567899999998643
No 124
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=54.53 E-value=40 Score=32.80 Aligned_cols=74 Identities=16% Similarity=0.073 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 333 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GA 333 (345)
.++.+++-.+..+...+..+-.... ..+..|++.||..++ +.| .+ +..-+... ++.+.....++++||
T Consensus 378 l~RAvlEgia~~~~~~~~~l~~~~g------~~~~~i~~~GG~aks-~~~--~Q-i~Adv~g~--pV~~~~~~e~~alGa 445 (501)
T 3g25_A 378 FIRATLESLCYQTRDVMEAMSKDSG------IDVQSLRVDGGAVKN-NFI--MQ-FQADIVNT--SVERPEIQETTALGA 445 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSS------CCCSEEEEESGGGGC-HHH--HH-HHHHHHTS--EEEEESCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCCcEEEEecchhcC-HHH--HH-HHHHHhCC--ceEecCCCcchHHHH
Confidence 4455666555555555554433222 125789999997643 433 33 33333321 233334566789999
Q ss_pred HHHHHH
Q 019144 334 ALLAWN 339 (345)
Q Consensus 334 a~la~~ 339 (345)
|++|..
T Consensus 446 A~la~~ 451 (501)
T 3g25_A 446 AFLAGL 451 (501)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 125
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=54.45 E-value=36 Score=33.19 Aligned_cols=73 Identities=15% Similarity=0.238 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHH
Q 019144 255 ANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAA 334 (345)
Q Consensus 255 a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa 334 (345)
++.+++-.+..+...+..+-.. ...+..|++.||..++ +.| .+ +..-+... ++.+.....++++|||
T Consensus 369 ~RAvlEgia~~~r~~~~~l~~~-------g~~~~~i~~~GGga~s-~~~--~Q-i~ADv~g~--pV~~~~~~e~~alGaA 435 (504)
T 3ll3_A 369 ARAVIEGIIFNLYDAASNLIKN-------TKKPVAINATGGFLKS-DFV--RQ-LCANIFNV--PIVTMKEQQSGTLAAM 435 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-------SCCCSEEEEESGGGCS-HHH--HH-HHHHHHTS--CEEEESCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-------CCCCCEEEEeCchhcC-HHH--HH-HHHHhhCC--eEEecCCCCchhHHHH
Confidence 4455555554444444333211 1135789999997743 433 33 33333322 2333345567899999
Q ss_pred HHHHHh
Q 019144 335 LLAWNS 340 (345)
Q Consensus 335 ~la~~~ 340 (345)
++|...
T Consensus 436 ~lA~~a 441 (504)
T 3ll3_A 436 FLARQA 441 (504)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998743
No 126
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=54.39 E-value=34 Score=33.56 Aligned_cols=74 Identities=18% Similarity=0.060 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 333 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GA 333 (345)
.++.+++-.+-.+-..+-.+-.... ..++.|.+.||..++ +.| .+.+ .-+... ++.+.....++++||
T Consensus 376 i~RAvlEgia~~~r~~le~l~~~~g------~~~~~i~v~GGgaks-~~~--~Qi~-ADvlg~--pV~~~~~~E~~alGA 443 (526)
T 3ezw_A 376 IIRATLESIAYQTRDVLEAMQADSG------IRLHALRVDGGAVAN-NFL--MQFQ-SDILGT--RVERPEVREVTALGA 443 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------CCCSEEEEESGGGGC-HHH--HHHH-HHHHTS--EEEEESCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCCCEEEEECchhhC-HHH--HHHH-HHHHCC--EEEeCCCCchHHHHH
Confidence 3455555555555555444433222 125789999997754 433 4433 333321 233334566789999
Q ss_pred HHHHHH
Q 019144 334 ALLAWN 339 (345)
Q Consensus 334 a~la~~ 339 (345)
|++|.-
T Consensus 444 A~lA~~ 449 (526)
T 3ezw_A 444 AYLAGL 449 (526)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 127
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=54.08 E-value=0.73 Score=42.83 Aligned_cols=15 Identities=13% Similarity=0.135 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHH
Q 019144 71 DAARETIEKVMADAL 85 (345)
Q Consensus 71 ~~~~~~l~~~i~~~~ 85 (345)
+.+.+.+.+.+++..
T Consensus 70 ~~i~~~i~~~~~~~~ 84 (343)
T 2yhw_A 70 NLILQMCVEAAAEAV 84 (343)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc
Confidence 556666666666643
No 128
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=53.89 E-value=52 Score=32.08 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 333 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GA 333 (345)
.++.+++-.+..+...+..+-.. . ..+..|++.||..++ +.| .+ +..-+... ++.+.....++++||
T Consensus 375 l~rAvlEgia~~~~~~~~~l~~~-g------~~~~~i~~~GGga~s-~~~--~Q-i~ADv~g~--pV~~~~~~e~~alGa 441 (508)
T 3ifr_A 375 LWRALLEAVALAFRHHVAVLDDI-G------HAPQRFFASDGGTRS-RVW--MG-IMADVLQR--PVQLLANPLGSAVGA 441 (508)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-T------CCCCEEEEESGGGGC-HHH--HH-HHHHHHTS--CEEEEECCSTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-C------CCCCEEEEeCCcccC-HHH--HH-HHHHHhCC--eEEecCCCCchHHHH
Confidence 34555555555555554443322 2 125679999997753 433 33 33333321 233334456899999
Q ss_pred HHHHHHh
Q 019144 334 ALLAWNS 340 (345)
Q Consensus 334 a~la~~~ 340 (345)
|++|...
T Consensus 442 A~lA~~a 448 (508)
T 3ifr_A 442 AWVAAIG 448 (508)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998643
No 129
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=52.52 E-value=46 Score=32.49 Aligned_cols=75 Identities=17% Similarity=0.082 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 333 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GA 333 (345)
.++.+++-.+..+...+..+-.... ..+..|++.||..++ +.| .+ +..-+... ++.+.....++++||
T Consensus 375 l~RAvlEgia~~~r~~~~~l~~~~g------~~~~~i~~~GGga~s-~~~--~Q-i~ADv~g~--pV~~~~~~e~~alGa 442 (510)
T 2p3r_A 375 IIRATLESIAYQTRDVLEAMQADSG------IRLHALRVDGGAVAN-NFL--MQ-FQSDILGT--RVERPEVREVTALGA 442 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------CCCSEEEEESGGGGC-HHH--HH-HHHHHHTS--EEEEESCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCccEEEEeCchhcC-HHH--HH-HHHHHhCC--ceEecCCCCcHHHHH
Confidence 4456666666655555555443322 124678998997643 433 44 33333321 233334556789999
Q ss_pred HHHHHHh
Q 019144 334 ALLAWNS 340 (345)
Q Consensus 334 a~la~~~ 340 (345)
|++|...
T Consensus 443 A~lA~~a 449 (510)
T 2p3r_A 443 AYLAGLA 449 (510)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998643
No 130
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=50.41 E-value=59 Score=31.55 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-ccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHS-FPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVG 332 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p-~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~G 332 (345)
.++.+++-.+..+...+..+-..... .+ ..|++.||..++ +.| .+.+...+. . ++.+.....++++|
T Consensus 380 l~rAvlEgia~~~~~~~~~l~~~~g~------~~~~~i~~~GG~a~s-~~~--~Q~~Adv~g-~--pV~~~~~~e~~alG 447 (503)
T 2w40_A 380 IVRALLEGIAFQLNEIVDSLTSDMGI------EMLHVLRCDGGMTKN-KPF--MQFNSDIIN-T--KIEVSKYKEVTSLG 447 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC------SCCSCEEEESGGGGC-HHH--HHHHHHHHT-S--CEEEESCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC------CccceEEEeCccccC-HHH--HHHHHHHHC-C--eEEecCCCcchHHH
Confidence 34455555555555544443322221 13 679999998754 333 433333332 1 23334445678999
Q ss_pred HHHHHHHh
Q 019144 333 AALLAWNS 340 (345)
Q Consensus 333 Aa~la~~~ 340 (345)
||++|...
T Consensus 448 aA~la~~~ 455 (503)
T 2w40_A 448 AAVLAGLE 455 (503)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998653
No 131
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=50.40 E-value=49 Score=32.07 Aligned_cols=48 Identities=21% Similarity=0.081 Sum_probs=29.1
Q ss_pred CccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHHHh
Q 019144 287 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 340 (345)
Q Consensus 287 p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~~~ 340 (345)
+..|++.||..++ +.| .+.+...+. . ++.+.....++++|||+++...
T Consensus 399 ~~~i~~~GG~a~n-~~~--~q~~Adv~g-~--pV~~~~~~e~~alGaA~la~~a 446 (495)
T 2dpn_A 399 LKVLKADGGMAQN-RLF--LKIQADLLG-V--PVAVPEVTETTALGAALMAGVG 446 (495)
T ss_dssp CCCEEEESGGGGC-HHH--HHHHHHHHT-S--CEEEESCSCHHHHHHHHHHHHH
T ss_pred CcEEEEecccccC-HHH--HHHHHHHhC-C--eeEecCCcccHHHHHHHHHHhh
Confidence 4679999997754 333 433333332 1 2333344567899999998643
No 132
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=50.08 E-value=24 Score=28.03 Aligned_cols=38 Identities=8% Similarity=0.116 Sum_probs=34.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccccceeEEeecCC
Q 019144 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSGV 105 (345)
Q Consensus 68 ~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~pG~ 105 (345)
-+++++++...+++++++++.++.+++|..|-+.+.-=
T Consensus 15 Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T~D 52 (127)
T 1dbf_A 15 DTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATPD 52 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCc
Confidence 36899999999999999999999999999999986643
No 133
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=49.38 E-value=49 Score=32.21 Aligned_cols=75 Identities=17% Similarity=0.011 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 333 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GA 333 (345)
.++.+++-.+..+...+..+-.... ..+..|++.||..++ +.| .+.+ .-+... ++.+.....++++||
T Consensus 377 l~RAvlEgia~~~r~~~~~l~~~~g------~~~~~i~~~GGga~s-~~~--~Qi~-ADv~g~--pV~~~~~~e~~alGa 444 (506)
T 3h3n_X 377 FVRATLQAVAYQSKDVIDTMKKDSG------IDIPLLKVDGGAAKN-DLL--MQFQ-ADILDI--DVQRAANLETTALGA 444 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------SCCCEEEEESGGGGC-HHH--HHHH-HHHHTS--EEEECSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCCCEEEEecccccC-HHH--HHHH-HHHhCC--eEEecCCCcchhHHH
Confidence 4456666666666555555443322 124678898987643 433 3333 333321 122223456789999
Q ss_pred HHHHHHh
Q 019144 334 ALLAWNS 340 (345)
Q Consensus 334 a~la~~~ 340 (345)
|++|...
T Consensus 445 A~lA~~a 451 (506)
T 3h3n_X 445 AYLAGLA 451 (506)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998743
No 134
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=48.63 E-value=66 Score=31.20 Aligned_cols=75 Identities=19% Similarity=0.088 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 333 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GA 333 (345)
.++.+++-.+..+...+..+-..... .+..|++.||..++ +.| .+ +..-+... ++.+.....++++||
T Consensus 377 l~rAvlEgia~~~~~~~~~l~~~~g~------~~~~i~~~GG~a~s-~~~--~Q-i~Adv~g~--pV~~~~~~e~~alGa 444 (504)
T 2d4w_A 377 IARAALEATAFQSREVVDAMNADSGV------DLTELRVDGGMVAN-ELL--MQ-FQADQLGV--DVVRPKVAETTALGA 444 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC------CCCEEEEESGGGGC-HHH--HH-HHHHHHTS--CEEEESCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC------CcceEEEeCCcccC-HHH--HH-HHHHHhCC--eEEeCCCCcchHHHH
Confidence 34555555555555555444332221 24679999998754 333 43 33333321 233334456789999
Q ss_pred HHHHHHh
Q 019144 334 ALLAWNS 340 (345)
Q Consensus 334 a~la~~~ 340 (345)
|++|...
T Consensus 445 A~lA~~~ 451 (504)
T 2d4w_A 445 AYAAGIA 451 (504)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998643
No 135
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=47.67 E-value=73 Score=30.64 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=28.4
Q ss_pred CccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCC-ChHHHHHHHHHHh
Q 019144 287 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKV-EPAVGAALLAWNS 340 (345)
Q Consensus 287 p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~-a~~~GAa~la~~~ 340 (345)
+..|++.||..++ +.| .+.+...+. . ++.+..... ++++|||++|...
T Consensus 387 ~~~i~~~GG~a~s-~~~--~Qi~Adv~g-~--pV~~~~~~e~~~alGAA~lA~~~ 435 (484)
T 2itm_A 387 PQSVTLIGGGARS-EYW--RQMLADISG-Q--QLDYRTGGDVGPALGAARLAQIA 435 (484)
T ss_dssp CSCEEEESGGGCC-HHH--HHHHHHHHC-C--CEEEESCTTSCHHHHHHHHHHHH
T ss_pred cceEEEEeccccC-HHH--HHHHHHHhC-C--eEEeCCCCCcccHHHHHHHHHHH
Confidence 5779999998754 333 333333332 1 233334445 4899999998654
No 136
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=47.56 E-value=70 Score=30.11 Aligned_cols=103 Identities=15% Similarity=0.112 Sum_probs=58.7
Q ss_pred cEEEEEecCcc--ceeeEEEcCccCCCCCCCCCCeeEEEecCCCCc-----------cccCHH-------HHHHHHHHHH
Q 019144 22 EVILGLDGGTT--STVCICMPVISMSDSLPDPLPVLARAAAGCSNH-----------NSVGED-------AARETIEKVM 81 (345)
Q Consensus 22 ~~~lgvDiG~t--~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~-----------~~~~~~-------~~~~~l~~~i 81 (345)
.++||+=.|++ -+.++++++++. . +++.....+.+.. ...+.+ ++-+...+++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~------~-~l~~~~~~py~~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av 74 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDR------T-TLLASHYLPMPAGLREDILALCVPGPDEIARAAEVEQRWVALAAQGV 74 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSS------E-EEEEEEEEECCHHHHHHHHHTTSCCBTHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEecCC------c-eecceeeecCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 37899988775 577899998321 1 4555544433210 001111 1234445678
Q ss_pred HHHHHHcCCCccccceeEEeecCCC---ChhHHHHH----HHHHHhhCCCCceEEEeCcHH
Q 019144 82 ADALLKSGSNRSAVRAVCLAVSGVN---HPTDQQRI----LNWLRDIFPGNVRLYVHNDAL 135 (345)
Q Consensus 82 ~~~~~~~~~~~~~i~~Igig~pG~~---~~~~~~~l----~~~L~~~~~~~~pV~v~NDa~ 135 (345)
.++++++++++++|..| |..|-. .|.....+ ...|.+.++ +||.-+--..
T Consensus 75 ~~~l~~~~~~~~~Id~I--GsHGQTv~H~P~~~~TlQiGd~~~iA~~Tg--i~vV~DFR~~ 131 (371)
T 3qbx_A 75 RELLLQQQMSPDEVRAI--GSHGQTIRHEPARHFTVQIGNPALLAELTG--IDVVADFRRR 131 (371)
T ss_dssp HHHHHHTTCCGGGCCEE--EECCEEEEEEGGGTEEEEECCHHHHHHHHS--SCEEECCSHH
T ss_pred HHHHHHcCCCcccccEE--EeCCccCccCCCCCCeeecCCHHHHHHHHC--cCEEeeChHH
Confidence 88899999988888875 558852 23211000 245566676 7776665544
No 137
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=45.86 E-value=30 Score=27.28 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=33.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCc-cccceeEEeecCC
Q 019144 68 VGEDAARETIEKVMADALLKSGSNR-SAVRAVCLAVSGV 105 (345)
Q Consensus 68 ~~~~~~~~~l~~~i~~~~~~~~~~~-~~i~~Igig~pG~ 105 (345)
-+++++++...+++++++++.++.+ ++|..|-+.+.-=
T Consensus 14 n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T~D 52 (122)
T 1ufy_A 14 DTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVTED 52 (122)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeCCc
Confidence 3689999999999999999999999 9999999986643
No 138
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=45.18 E-value=41 Score=33.19 Aligned_cols=47 Identities=9% Similarity=-0.029 Sum_probs=28.5
Q ss_pred CccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHHH
Q 019144 287 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWN 339 (345)
Q Consensus 287 p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~~ 339 (345)
+..|++.||..++ +.| .+ +..-+... ++.+.....++++|||++|..
T Consensus 443 ~~~i~~~GG~aks-~~~--~Q-i~ADv~g~--pV~~~~~~e~~alGAA~lA~~ 489 (554)
T 3l0q_A 443 IDTMMASGGGTKN-PIF--VQ-EHANATGC--AMLLPEESEAMLLGSAMMGTV 489 (554)
T ss_dssp CCEEEEESGGGGC-HHH--HH-HHHHHHCC--EEEEESCSCHHHHHHHHHHHH
T ss_pred CCEEEEeCccccC-HHH--HH-HHHHhhCC--eEEecCCCcchHHHHHHHHHH
Confidence 5679999997643 433 33 33333321 233334466789999999864
No 139
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=44.05 E-value=37 Score=33.66 Aligned_cols=75 Identities=19% Similarity=0.196 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGA 333 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GA 333 (345)
.++.+++-.+-.+...+- .+.- .+..+..|++.||....++.| .+ +..-+... ++.+.....++++||
T Consensus 414 l~RAvlEgia~~~r~~~~----~l~~---~g~~~~~i~~~GGga~ks~~~--~Q-i~ADv~g~--pV~~~~~~e~~alGa 481 (572)
T 3jvp_A 414 IYRALLEATAFGTRAIVD----AFHG---RGVEVHELYACGGLPQKNHLL--MQ-IFADVTNR--EIKVAASKQTPALGA 481 (572)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHHT---TTCCEEEEEEESSHHHHCHHH--HH-HHHHHHTS--CEEEBCCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH----HHHH---cCCCcCEEEEEcCchhhCHHH--HH-HHHHHHCC--eeEecCCCccHHHHH
Confidence 344555544444444443 3321 122356799999977233433 33 33333321 233334567789999
Q ss_pred HHHHHHh
Q 019144 334 ALLAWNS 340 (345)
Q Consensus 334 a~la~~~ 340 (345)
|++|...
T Consensus 482 A~lA~~a 488 (572)
T 3jvp_A 482 AMFASVA 488 (572)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998754
No 140
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=43.47 E-value=1.4 Score=42.02 Aligned_cols=14 Identities=14% Similarity=0.271 Sum_probs=8.5
Q ss_pred CCCCeEEeccCCCC
Q 019144 164 EDGRDARAAGAGPI 177 (345)
Q Consensus 164 ~dG~~~~~Gg~G~~ 177 (345)
.+|....||..|++
T Consensus 252 ~~g~~c~cG~~gcl 265 (406)
T 1z6r_A 252 PYGKRCYCGNHGCL 265 (406)
T ss_dssp TTSCBCTTSCBSBT
T ss_pred CCCCCCCCCCccch
Confidence 34666667766653
No 141
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=41.12 E-value=1.1e+02 Score=30.60 Aligned_cols=66 Identities=15% Similarity=0.071 Sum_probs=39.1
Q ss_pred EEEEecCccceeeEEEcCccCCCCCCCCCCeeEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceeEEee
Q 019144 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (345)
Q Consensus 24 ~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~Igig~ 102 (345)
.+||..-..-..++|+. +|++++-......+...++..++ =..+|+.+|+++|+..++|..|+++-
T Consensus 12 ~~g~~~~~HDsaAaLv~----------DG~ivaA~eEERftR~Kh~~~~f---P~~AI~~cL~~AGi~~~DID~Va~~~ 77 (576)
T 3ven_A 12 LNGWPRDFHDASAALLV----------DGRIAAFAEEERLTRKKHGYNTA---PVQAAAFCLAQAGLTVDDLDAVAFGW 77 (576)
T ss_dssp EECCSSSCCCCEEEEEE----------TTEEEEEEEHHHHHCCTTCTTSC---CHHHHHHHHHHHTCCGGGCSEEEESS
T ss_pred hccccccCCCceEEEEE----------CCEEEEEEEEEEeeeecccCCCC---CHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 34555544556666775 58888755443322211221101 12346678889999999999998754
No 142
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=39.67 E-value=2.3e+02 Score=26.12 Aligned_cols=128 Identities=13% Similarity=0.035 Sum_probs=66.2
Q ss_pred cEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEE-----EecCC-CCccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 019144 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR-----AAAGC-SNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~-----~~~~~-~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i 95 (345)
.+++.||+|++++|+.+++..... ....+.+ .+..+ ......+++.+ .+.++++.+.......+|
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~~-----~~~~i~~~~~~~~k~~~gLs~~~~~~~~~----~~~l~~f~~~~~~~~~~v 73 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDD-----TNTPIHIEEIWNKKIKPGFASIQPNSVTI----DAYLTMLLADAPIHNIPV 73 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECT-----TSCEEEEEEEEEEEESSCGGGSCCSHHHH----HHHHHHHHTTCSCCSEEE
T ss_pred CEEEEEEcCCCCeEEEEEEEcCCC-----CCceeEeeeeeeeccCCChhhcCCCHHHH----HHHHHHHHHHHhcCCCcE
Confidence 378999999999999999873110 1233333 22211 11111234433 333335444111122223
Q ss_pred ceeEEeecCC-CChh-HHHHHHHHHHhhC-------CCCceEEEeCcHHH---HHhcc--cCC----C--CCeEEEEeCc
Q 019144 96 RAVCLAVSGV-NHPT-DQQRILNWLRDIF-------PGNVRLYVHNDALA---ALASG--TMG----K--LHGCVLIAGT 155 (345)
Q Consensus 96 ~~Igig~pG~-~~~~-~~~~l~~~L~~~~-------~~~~pV~v~NDa~~---a~~~~--~~g----~--~~~v~v~~GT 155 (345)
..++++|+ .-++ ....+.+.+++.+ + .+|.|-....= ++++. ..+ . +..+++=+|.
T Consensus 74 --~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g--~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGG 149 (353)
T 3aap_A 74 --YFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQL--VEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGG 149 (353)
T ss_dssp --EEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEE--EEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECS
T ss_pred --EEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCC--CeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCC
Confidence 35677776 2222 2455666777766 4 67888776652 33321 111 2 2367777888
Q ss_pred cceeeee
Q 019144 156 GTIAYGF 162 (345)
Q Consensus 156 G~~g~gi 162 (345)
|+.-..+
T Consensus 150 GStei~~ 156 (353)
T 3aap_A 150 ASVQIVF 156 (353)
T ss_dssp SEEEEEE
T ss_pred CceEEEE
Confidence 8755444
No 143
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=38.66 E-value=97 Score=30.33 Aligned_cols=48 Identities=19% Similarity=0.250 Sum_probs=28.2
Q ss_pred CccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHHHh
Q 019144 287 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAWNS 340 (345)
Q Consensus 287 p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~~~ 340 (345)
+..|++.||..++ +.| .+ +..-+... ++.+.....++++|||++|...
T Consensus 435 ~~~i~~~GGga~s-~~~--~Q-i~ADv~g~--pV~~~~~~e~~alGaA~lA~~a 482 (538)
T 4bc3_A 435 KTKILATGGASHN-REI--LQ-VLADVFDA--PVYVIDTANSACVGSAYRAFHG 482 (538)
T ss_dssp TCCEEEEEGGGGC-HHH--HH-HHHHHHTS--CEEECCCTTHHHHHHHHHHHHH
T ss_pred CCeEEEEcchhcC-HHH--HH-HHHHHhCC--ceEecCCCCchHHHHHHHHHHH
Confidence 4678888887743 433 33 33333321 2333334567899999998643
No 144
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=38.37 E-value=55 Score=30.29 Aligned_cols=48 Identities=25% Similarity=0.146 Sum_probs=34.1
Q ss_pred ccEEEEcCcccCcccccchHHHHHHHHhhCCC---ceeeC---CCCChHHHHHHHHH
Q 019144 288 FPLVMVGGVLEANRRWDIGREVVKCILRDYPG---AVPIR---PKVEPAVGAALLAW 338 (345)
Q Consensus 288 ~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~---~~i~~---~~~a~~~GAa~la~ 338 (345)
..|||.||-... +-+ .+.+++++.+..|. +++.. +..+.++||+.++-
T Consensus 295 ~~IvLtGG~s~~-pG~--~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 295 ANNVMSGGTTMY-PGI--ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp TCEEEESGGGCS-TTH--HHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred hCcEeeCCCCCC-ccH--HHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 459999997654 334 78889988877653 55543 35678899998875
No 145
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=33.34 E-value=4.2 Score=38.29 Aligned_cols=15 Identities=7% Similarity=0.022 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHH
Q 019144 70 EDAARETIEKVMADA 84 (345)
Q Consensus 70 ~~~~~~~l~~~i~~~ 84 (345)
.+.+.+.+.+++++.
T Consensus 128 ~~~l~~~i~~~~~~~ 142 (380)
T 2hoe_A 128 LNVMYRIIDRAKDMM 142 (380)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 455666677766665
No 146
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=33.24 E-value=2.4 Score=39.18 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=22.7
Q ss_pred eecCCCCeEEeccCCCCcCC-----------cCcHHHHHHHHH
Q 019144 161 GFTEDGRDARAAGAGPILGD-----------WGSGYGIAAQAL 192 (345)
Q Consensus 161 gi~~dG~~~~~Gg~G~~~gd-----------~G~a~~iG~~~~ 192 (345)
|-+..|.-..+||+||+..+ .|..|.||+..|
T Consensus 166 G~l~~G~~g~aGEiGh~~v~~~~~~~~~~~~~g~~C~cG~~gc 208 (327)
T 4db3_A 166 GKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKGC 208 (327)
T ss_dssp TEECCCTTSCTTCGGGSBCCHHHHHHTCTTCCCCBCTTSCBSB
T ss_pred CEEeecCCCcCcccccEEeccccccccccccCCCcCCCCCcch
Confidence 33456887889999999876 355677776544
No 147
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=32.14 E-value=2.8 Score=38.51 Aligned_cols=26 Identities=19% Similarity=0.256 Sum_probs=15.0
Q ss_pred CCCCeEEeccCCCCcCCcCcHHHHHHH
Q 019144 164 EDGRDARAAGAGPILGDWGSGYGIAAQ 190 (345)
Q Consensus 164 ~dG~~~~~Gg~G~~~gd~G~a~~iG~~ 190 (345)
.+|....||..|++ -...|...+-++
T Consensus 162 ~~g~~c~cG~~gcl-E~~~S~~al~~~ 187 (321)
T 3vgl_A 162 PDGLLCGCGSQGCW-EQYASGRALVRY 187 (321)
T ss_dssp TTCSBCTTSCBSBG-GGTSSHHHHHHH
T ss_pred CCCCCCCCCCcCcH-HHhcCHHHHHHH
Confidence 45777778888764 233455455443
No 148
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=29.98 E-value=1.4e+02 Score=28.73 Aligned_cols=139 Identities=12% Similarity=0.051 Sum_probs=69.1
Q ss_pred CccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEE---Eec--CC-CCccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 019144 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR---AAA--GC-SNHNSVGEDAARETIEKVMADALLKSGSNRS 93 (345)
Q Consensus 20 ~~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~---~~~--~~-~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 93 (345)
...|.+.||+|.|.+|+.++.....+.+ ...++.+ .+. +. +... .+++.+.+.|..+++.+.+.......
T Consensus 32 ~~~y~iviDaGSsgtRl~VY~~~~~~~~---~~~~~~~~~~~k~~gpGlSs~~-~~p~~~~~~l~~Ll~~a~~~vp~~~~ 107 (452)
T 3zx3_A 32 NVKYGIVLDAGSSHTNLYIYKWPAEKEN---DTGVVQQLEECQVKGPGISKYA-QKTDEIAAYLAECMKMSTERIPASKQ 107 (452)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEECCCTT---CCCCCEEEEEEECSSSCGGGGT-TCGGGHHHHHHHHHHHHHHHSCHHHH
T ss_pred CceEEEEEEcCCCCcEEEEEEEeCCcCC---CccccceeeeecccCCChhccC-CCHHHHHHHHHHHHHHHHHhCCHHHc
Confidence 3469999999999999999887321100 0112221 111 11 2222 36777777787777776654221111
Q ss_pred cccee-EEeecCC-CC----hhHHHHHHHHHHhhC---CCC-ceEEEeCcHHH---HHhcc--cCC------CCCeEEEE
Q 019144 94 AVRAV-CLAVSGV-NH----PTDQQRILNWLRDIF---PGN-VRLYVHNDALA---ALASG--TMG------KLHGCVLI 152 (345)
Q Consensus 94 ~i~~I-gig~pG~-~~----~~~~~~l~~~L~~~~---~~~-~pV~v~NDa~~---a~~~~--~~g------~~~~v~v~ 152 (345)
+...| .++++|+ .- ++....+.+.+++.+ ++. ..|.|-....= ++++. ..+ .+...++=
T Consensus 108 ~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lD 187 (452)
T 3zx3_A 108 HQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALD 187 (452)
T ss_dssp TTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEE
T ss_pred CCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEe
Confidence 22223 3567776 11 112334444445444 310 25777766552 23321 111 23445566
Q ss_pred eCccceeeee
Q 019144 153 AGTGTIAYGF 162 (345)
Q Consensus 153 ~GTG~~g~gi 162 (345)
+|.|+.=..+
T Consensus 188 lGGgStQi~f 197 (452)
T 3zx3_A 188 LGGASTQITF 197 (452)
T ss_dssp ECSSEEEEEE
T ss_pred cCCCceEEEe
Confidence 7777643333
No 149
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=29.74 E-value=2.2e+02 Score=26.72 Aligned_cols=103 Identities=11% Similarity=0.119 Sum_probs=57.7
Q ss_pred EEEEEecCcc--ceeeEEEcCccCCCCCCCCCCeeEEEecCCCCc-----------cccCHH-------HHHHHHHHHHH
Q 019144 23 VILGLDGGTT--STVCICMPVISMSDSLPDPLPVLARAAAGCSNH-----------NSVGED-------AARETIEKVMA 82 (345)
Q Consensus 23 ~~lgvDiG~t--~~~~~l~d~~~~~~~~~~~g~i~~~~~~~~~~~-----------~~~~~~-------~~~~~l~~~i~ 82 (345)
++||+=.|++ -+.++++++++. .-+++.....+.+.. ...+.+ ++-+...+++.
T Consensus 6 ~~iGlMSGTSlDGiD~alv~~~~~------~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~ 79 (370)
T 3cqy_A 6 YYIGLMSGTSMDGVDAVLVDFAGE------QPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAVN 79 (370)
T ss_dssp EEEEEEECTTCCCEEEEEEECSSS------SCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccchhhHeEEEEEEeCC------eEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7899987775 577899998321 133555554443211 001111 12334446788
Q ss_pred HHHHHcCCCccccceeEEeecCCC---ChhH--HHHH----HHHHHhhCCCCceEEEeCcHH
Q 019144 83 DALLKSGSNRSAVRAVCLAVSGVN---HPTD--QQRI----LNWLRDIFPGNVRLYVHNDAL 135 (345)
Q Consensus 83 ~~~~~~~~~~~~i~~Igig~pG~~---~~~~--~~~l----~~~L~~~~~~~~pV~v~NDa~ 135 (345)
++++++++++++|..| |.+|-. .|.. ...+ ...|.++++ +||.-+--..
T Consensus 80 ~~l~~~~~~~~~i~~I--GsHGQTv~H~P~~~~~~TlQiGd~~~iA~~tg--i~vV~DFR~~ 137 (370)
T 3cqy_A 80 NLLAKTKIAKDEIIAI--GSHGQTVRHMPNLEVGFTLQIGDPNTIATETG--IDVIADFRRK 137 (370)
T ss_dssp HHHHHHCCCGGGEEEE--EEEEEEEEEETTSSSCEEEEESCHHHHHHHHS--SCEEECCHHH
T ss_pred HHHHHcCCCcccccEE--EeCCcccccCCCCCCCceEecCCHHHHHHHHC--cCEEeeChhh
Confidence 8899999988888775 558852 2211 0000 245666776 7766555444
No 150
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=28.42 E-value=1.6e+02 Score=28.20 Aligned_cols=73 Identities=15% Similarity=0.080 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeC-CCCChHHH
Q 019144 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIR-PKVEPAVG 332 (345)
Q Consensus 254 ~a~~il~~~~~~Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~-~~~a~~~G 332 (345)
.++.+++-.+..+...+-.+-.... ..++.|.+.||..++ +.| .+ +..-+.. ..|.. ...++++|
T Consensus 367 l~RAvlEgia~~~r~~~~~l~~~~g------~~~~~i~~~GGgaks-~~~--~Q-i~ADvlg----~pV~~~~~e~~alG 432 (489)
T 2uyt_A 367 LARCIFDSLALLYADVLHELAQLRG------EDFSQLHIVGGGCQN-TLL--NQ-LCADACG----IRVIAGPVEASTLG 432 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT------CCCSEEEEESGGGGC-HHH--HH-HHHHHHT----SEEEECCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC------CCCCEEEEeCChhhh-HHH--HH-HHHHHHC----CeeecCCccHhHHH
Confidence 4555666555555555555433222 124678899998754 433 43 3333332 23322 25678899
Q ss_pred HHHHHHHh
Q 019144 333 AALLAWNS 340 (345)
Q Consensus 333 Aa~la~~~ 340 (345)
|+.+|+..
T Consensus 433 aa~~A~~a 440 (489)
T 2uyt_A 433 NIGIQLMT 440 (489)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 97776543
No 151
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=28.13 E-value=79 Score=28.54 Aligned_cols=45 Identities=18% Similarity=0.112 Sum_probs=28.0
Q ss_pred ccEEEEcCcccCcccccchHHHHHHHHhhCCCceee-CCCCChHHHHHHHHH
Q 019144 288 FPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI-RPKVEPAVGAALLAW 338 (345)
Q Consensus 288 ~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~-~~~~a~~~GAa~la~ 338 (345)
..|+|.||.... +. +.+.+++.+.. .+.+. .+..+.++||+.++.
T Consensus 279 ~~IvL~GG~s~~-p~--l~~~l~~~~~~---~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 279 RGIFLTGGGSLL-RG--LDTLLQKETGI---SVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp HCEEEESGGGCS-BT--HHHHHHHHHSS---CEEECSSTTTHHHHHHHHGGG
T ss_pred CcEEEECccccc-hH--HHHHHHHHHCC---CccccCChHHHHHHHHHHHHh
Confidence 468999997643 22 35556655532 23322 356788999998875
No 152
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=27.46 E-value=88 Score=30.42 Aligned_cols=46 Identities=26% Similarity=0.317 Sum_probs=27.7
Q ss_pred CccEEEEcCcccCcccccchHHHHHHHHhhCCCcee-eC--CCCChHHHHHHHHHHh
Q 019144 287 SFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVP-IR--PKVEPAVGAALLAWNS 340 (345)
Q Consensus 287 p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i-~~--~~~a~~~GAa~la~~~ 340 (345)
+..|++.||..++ +.| .+ +..-+. +..| .. ...++++|||++|...
T Consensus 403 ~~~i~~~GGga~s-~~~--~Q-i~ADv~----g~pV~~~~~~~e~~alGaA~lA~~a 451 (511)
T 3hz6_A 403 VGLLKVVGGGARS-EAW--LR-MIADNL----NVSLLVKPDAHLHPLRGLAALAAVE 451 (511)
T ss_dssp CCEEEEESGGGGC-HHH--HH-HHHHHH----TCEEEECCCGGGHHHHHHHHHHHHH
T ss_pred CCEEEEeCchhcC-HHH--HH-HHHHHH----CCeeEEecCCCCchHHHHHHHHHHH
Confidence 4678888887643 433 33 333333 2344 33 3567899999998643
No 153
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=27.40 E-value=1.6e+02 Score=28.42 Aligned_cols=108 Identities=13% Similarity=0.117 Sum_probs=56.1
Q ss_pred ccEEEEEecCccceeeEEEcCccCCCCCCCCCCeeEEE---ec--CCCCccccCHHHHHHHHHHHHHHHHHH-----cCC
Q 019144 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA---AA--GCSNHNSVGEDAARETIEKVMADALLK-----SGS 90 (345)
Q Consensus 21 ~~~~lgvDiG~t~~~~~l~d~~~~~~~~~~~g~i~~~~---~~--~~~~~~~~~~~~~~~~l~~~i~~~~~~-----~~~ 90 (345)
..|.+.||+|++++|+.+++....+.. .-.++.+. +. +-......+++++.+.+..+++.+... .+.
T Consensus 33 ~~y~~vID~GSns~Rl~Vy~~~~~~~~---~~~~~~~~~~~~~~~~Gls~~~~~pe~~~~~l~~Ll~~a~~~iP~~~~~~ 109 (456)
T 3cj1_A 33 LKYGIVLDAGSSHTSMFVYKWPADKEN---DTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHAS 109 (456)
T ss_dssp EEEEEEEEECSSCEEEEEEEEETTSTT---STTCCEEEEEEECSSSCGGGGTTSTHHHHHHTHHHHHHHHHHSCHHHHTT
T ss_pred ceEEEEEEcCCCCeEEEEEEEcCCCCC---CccceeeeeeeeecccccccccCCHHHHHHHHHHHHHHHHHhCCHHHcCC
Confidence 459999999999999999986311000 00122221 11 111111135677777777776666533 222
Q ss_pred CccccceeEEeecCC-CC----hhHHHHHHHHHHhhCC---C-CceEEEeCcHH
Q 019144 91 NRSAVRAVCLAVSGV-NH----PTDQQRILNWLRDIFP---G-NVRLYVHNDAL 135 (345)
Q Consensus 91 ~~~~i~~Igig~pG~-~~----~~~~~~l~~~L~~~~~---~-~~pV~v~NDa~ 135 (345)
. .| ..++++|+ .- ++....+.+.+++.++ + ...+.|-....
T Consensus 110 t--~v--~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~e 159 (456)
T 3cj1_A 110 T--PL--YLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQD 159 (456)
T ss_dssp C--EE--EEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHH
T ss_pred c--eE--EEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchH
Confidence 2 23 34677776 11 2233456666666552 1 02566666554
No 154
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=26.93 E-value=80 Score=30.62 Aligned_cols=62 Identities=11% Similarity=0.088 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHH-HhhCCCceeeCCCCChHHHHHHHHHHh
Q 019144 266 LALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCI-LRDYPGAVPIRPKVEPAVGAALLAWNS 340 (345)
Q Consensus 266 Lg~~l~~lv~~ld~~~~~~~~p~~IVlgGgl~~~~~~~~l~~~~~~~l-~~~~~~~~i~~~~~a~~~GAa~la~~~ 340 (345)
++-.+..++..+.. ...|++.||..+ ++.| -.+..-+ ... ++.+.....++++|||++|...
T Consensus 374 ia~~~r~~l~~~~~-------~~~i~~~GG~a~-s~~w---~Qi~ADv~~g~--pV~~~~~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 374 AALVADTALDLIGS-------TGRILVEGRFAE-ADVF---VRALASLRPDC--AVYTANAHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHHHHHHHHTTC-------CSEEEEESGGGG-CHHH---HHHHHHHSTTS--EEEEESSCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhcC-------CCeEEEeCCccc-CHHH---HHHHhhhcCCC--eEEEcCCCchHHHHHHHHhCcc
Confidence 44555555556652 367888888764 3433 3343333 221 1333345668889999998643
No 155
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=25.94 E-value=66 Score=30.78 Aligned_cols=26 Identities=19% Similarity=0.170 Sum_probs=18.4
Q ss_pred cccCCcc-EEEEEecCccceeeEEEcC
Q 019144 16 EESGGRE-VILGLDGGTTSTVCICMPV 41 (345)
Q Consensus 16 ~~~~~~~-~~lgvDiG~t~~~~~l~d~ 41 (345)
|++.|+. .+|.|-.|+|++|+.|+|.
T Consensus 12 m~~~Ms~klILviN~GSSS~K~~lf~~ 38 (415)
T 3sk3_A 12 MASHMSSKLVLVLNCGSSSLKFAIIDA 38 (415)
T ss_dssp ------CCEEEEEEECSSCEEEEEEET
T ss_pred ccccCCCCeEEEEeCchHhhhheeEEC
Confidence 6667754 6999999999999999986
No 156
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=25.61 E-value=29 Score=34.38 Aligned_cols=47 Identities=26% Similarity=0.248 Sum_probs=30.6
Q ss_pred CCccEEEEcCcccCcccccchHHHHHHHHhhCCCceee---CCCCChHHHHHHHHHH
Q 019144 286 HSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPI---RPKVEPAVGAALLAWN 339 (345)
Q Consensus 286 ~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~---~~~~a~~~GAa~la~~ 339 (345)
+...|+|.||... .+.+++.+++.++..++. .++.+.++||+..+..
T Consensus 330 ~i~~VvLvGG~sr-------ip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~ 379 (554)
T 1yuw_A 330 QIHDIVLVGGSTR-------IPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 379 (554)
T ss_dssp GCCEEEEESGGGG-------CHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHH
T ss_pred hCcEEEEECCccc-------ChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHH
Confidence 3578999999764 334555566655433332 3567789999998863
No 157
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=25.59 E-value=1.8e+02 Score=26.37 Aligned_cols=20 Identities=35% Similarity=0.321 Sum_probs=17.5
Q ss_pred cEEEEEecCccceeeEEEcC
Q 019144 22 EVILGLDGGTTSTVCICMPV 41 (345)
Q Consensus 22 ~~~lgvDiG~t~~~~~l~d~ 41 (345)
..++-+|+|+..+.+.++..
T Consensus 191 ~~~~vvDiGggttdi~i~~~ 210 (377)
T 2ych_A 191 RVFLVLDIGAESTSLVLLRG 210 (377)
T ss_dssp CEEEEEEECSSCEEEEEEET
T ss_pred CeEEEEEECCCcEEEEEEEC
Confidence 36788999999999999975
No 158
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=25.10 E-value=73 Score=31.81 Aligned_cols=49 Identities=18% Similarity=0.262 Sum_probs=29.1
Q ss_pred CCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCChHHHHHHHHH
Q 019144 285 KHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVEPAVGAALLAW 338 (345)
Q Consensus 285 ~~p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~~a~~~GAa~la~ 338 (345)
.+...|+|.||.... + . +.+.+++.+.. +......++.+.++||+..+.
T Consensus 332 ~~i~~VvLvGG~sri-p-~-v~~~l~~~fg~--~~~~~~npd~aVA~GAa~~a~ 380 (605)
T 2kho_A 332 SDIDDVILVGGQTRM-P-M-VQKKVAEFFGK--EPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp TTCSEEEEESGGGGS-H-H-HHHHHHHHHSS--CCBCSSCTTTHHHHHHHHHHT
T ss_pred hhCceEEEECCcccC-h-H-HHHHHHHhcCC--CcCcCCCcchHHHHHHHHHHH
Confidence 345789999997743 2 2 24444444421 222233456788999998874
No 159
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=24.48 E-value=4.2 Score=36.98 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=23.1
Q ss_pred eecCCCCeEEeccCCCCcCCc-CcHHHHHHHHHH
Q 019144 161 GFTEDGRDARAAGAGPILGDW-GSGYGIAAQALT 193 (345)
Q Consensus 161 gi~~dG~~~~~Gg~G~~~gd~-G~a~~iG~~~~~ 193 (345)
|-...|.-..+||+||+..+. |..|.||+..|.
T Consensus 144 g~l~~G~~g~aGEiGh~~v~~~g~~c~cg~~gcl 177 (302)
T 3vov_A 144 GRVLRGERGQGGELGHLTLLPGGPACGCGLEGCL 177 (302)
T ss_dssp TEECCCTTSCTTCGGGSBSSTTCCBCTTSCBSBH
T ss_pred CEEeeCCCCCCccccceEecCCCCCCCCCCcchH
Confidence 344678878899999997654 556777765543
No 160
>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}
Probab=22.88 E-value=2.8e+02 Score=21.87 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=35.3
Q ss_pred ChhhHHHHhhcCCChHHHhcchHHHHHHH-----HcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019144 220 SPDELIGWTYVDPSWARIAALVPVVVSCA-----EAGDEVANKILQDSVEELALSVKAVVQRL 277 (345)
Q Consensus 220 ~~~~l~~~~~~~~~~~~~~~~~~~v~~~a-----~~gD~~a~~il~~~~~~Lg~~l~~lv~~l 277 (345)
++..++.... .+++.+..|+..+ ...||.-++-|.++++.|+..++.+|.--
T Consensus 38 ~p~~Mv~~ak------~iAr~a~~Li~~~K~eAd~seDp~~~~rLl~AAk~La~At~~MVeaA 94 (131)
T 2l7a_A 38 DAGEMVRQAR------ILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAA 94 (131)
T ss_dssp CHHHHHHHHH------HHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4565555432 2343333444333 45799999999999999999999988755
No 161
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=22.20 E-value=3.5 Score=37.80 Aligned_cols=12 Identities=8% Similarity=-0.033 Sum_probs=6.1
Q ss_pred EEEEEecCccce
Q 019144 23 VILGLDGGTTST 34 (345)
Q Consensus 23 ~~lgvDiG~t~~ 34 (345)
.+.-+|..+.-+
T Consensus 37 ~~~l~d~~g~il 48 (327)
T 2ap1_A 37 ALGVFDSTRRLQ 48 (327)
T ss_dssp EEEEEETTCCEE
T ss_pred EEEEEeCCCCEE
Confidence 444456665433
No 162
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=22.05 E-value=61 Score=29.20 Aligned_cols=85 Identities=14% Similarity=0.004 Sum_probs=43.1
Q ss_pred HHHHHcCCCccccceeEEeecCC--CCh---hHHHHHHHHHHhhCCC---------C-ceEEEeCcHHHHHhccc---CC
Q 019144 83 DALLKSGSNRSAVRAVCLAVSGV--NHP---TDQQRILNWLRDIFPG---------N-VRLYVHNDALAALASGT---MG 144 (345)
Q Consensus 83 ~~~~~~~~~~~~i~~Igig~pG~--~~~---~~~~~l~~~L~~~~~~---------~-~pV~v~NDa~~a~~~~~---~g 144 (345)
..+.+++..+..+ .+.+|+|=- ... .+...+++.++..+.. . ..|.+.+...+++++.. ..
T Consensus 84 ~aL~~~~~~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~~~~~~ 162 (320)
T 2zgy_A 84 HALLTSGLPVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQELDE 162 (320)
T ss_dssp HHHHHHSCCSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHHHHSCT
T ss_pred HHHHHcCCCCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhhccccC
Confidence 3444455544344 488888843 221 1112344444332210 0 24666777676655421 11
Q ss_pred CCCeEEEEeCccceeeeecCCCCe
Q 019144 145 KLHGCVLIAGTGTIAYGFTEDGRD 168 (345)
Q Consensus 145 ~~~~v~v~~GTG~~g~gi~~dG~~ 168 (345)
....+++=+|.|..-..++.+|.+
T Consensus 163 ~~~~~vvDiGggttd~~v~~~g~~ 186 (320)
T 2zgy_A 163 LDSLLIIDLGGTTLDISQVMGKLS 186 (320)
T ss_dssp TCEEEEEEECSSCEEEEEEEGGGC
T ss_pred CCCEEEEEcCCCeEEEEEEeCCee
Confidence 233556668888766777777654
No 163
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=20.16 E-value=1.7e+02 Score=28.47 Aligned_cols=66 Identities=15% Similarity=0.213 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhccCCCCCCC--CccEEEEcCcccCcccccchHHHHHHHHhhCCC--ceeeCC------CCChHHHHHH
Q 019144 266 LALSVKAVVQRLSLSGEDGKH--SFPLVMVGGVLEANRRWDIGREVVKCILRDYPG--AVPIRP------KVEPAVGAAL 335 (345)
Q Consensus 266 Lg~~l~~lv~~ld~~~~~~~~--p~~IVlgGgl~~~~~~~~l~~~~~~~l~~~~~~--~~i~~~------~~a~~~GAa~ 335 (345)
|.+.+.+.+...|. +-+. -..|||+||-... +-| .+.++++|....|. ++|..+ .+++.+|++.
T Consensus 394 i~e~i~~sI~~cd~---d~r~~L~~nIvLsGGst~~-pGf--~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsi 467 (498)
T 3qb0_A 394 LADLVYSSIMSSDV---DLRATLAHNVVLTGGTSSI-PGL--SDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSI 467 (498)
T ss_dssp HHHHHHHHHHTSCT---TTHHHHHTTEEEESGGGGS-TTH--HHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHH
T ss_pred chHHHHHHHHhCCH---HHHHHHhcCEEEeCCccCc-hhH--HHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEE
Confidence 45566666666663 0000 1259999997754 344 88899999988774 455543 3667899988
Q ss_pred HH
Q 019144 336 LA 337 (345)
Q Consensus 336 la 337 (345)
||
T Consensus 468 la 469 (498)
T 3qb0_A 468 LT 469 (498)
T ss_dssp HH
T ss_pred Ee
Confidence 86
Done!