Query 019151
Match_columns 345
No_of_seqs 242 out of 1079
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 11:41:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019151.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019151hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x2na1 a.4.1.1 (A:6-67) Homeo 99.8 1.4E-19 1E-23 134.9 6.9 59 259-317 3-61 (62)
2 d1pufb_ a.4.1.1 (B:) pbx1 {Hum 99.8 4.5E-19 3.3E-23 135.8 7.3 63 259-321 2-64 (73)
3 d1k61a_ a.4.1.1 (A:) mat alpha 99.7 1.4E-18 9.9E-23 128.6 7.2 58 262-319 2-59 (60)
4 d1wi3a_ a.4.1.1 (A:) DNA-bindi 99.6 8.6E-16 6.3E-20 116.7 7.6 64 258-323 7-70 (71)
5 d1ocpa_ a.4.1.1 (A:) Oct-3 POU 99.5 3.3E-15 2.4E-19 112.7 6.2 60 258-320 8-67 (67)
6 d1le8a_ a.4.1.1 (A:) Mating ty 99.5 5.1E-15 3.7E-19 106.7 7.0 53 262-317 1-53 (53)
7 d2craa1 a.4.1.1 (A:7-64) Homeo 99.5 5.7E-15 4.1E-19 108.5 7.3 57 259-318 2-58 (58)
8 d1au7a1 a.4.1.1 (A:103-160) Pi 99.5 7.2E-15 5.2E-19 107.7 7.4 57 260-319 1-57 (58)
9 d1ftta_ a.4.1.1 (A:) Thyroid t 99.5 5.8E-15 4.2E-19 111.5 7.1 63 258-323 2-64 (68)
10 d2e1oa1 a.4.1.1 (A:8-64) Homeo 99.5 5.1E-15 3.7E-19 108.1 6.6 57 259-318 1-57 (57)
11 d1bw5a_ a.4.1.1 (A:) Insulin g 99.5 7.3E-15 5.4E-19 110.3 7.4 61 258-321 3-63 (66)
12 d1e3oc1 a.4.1.1 (C:104-160) Oc 99.5 9.1E-15 6.6E-19 106.9 7.4 57 261-320 1-57 (57)
13 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 99.5 8.5E-15 6.2E-19 107.1 6.6 57 259-318 1-57 (58)
14 d1fjla_ a.4.1.1 (A:) Paired pr 99.5 1E-14 7.4E-19 109.2 6.4 60 258-320 2-61 (65)
15 d1p7ia_ a.4.1.1 (A:) Engrailed 99.5 2.6E-14 1.9E-18 102.8 7.1 53 260-315 1-53 (53)
16 d1jgga_ a.4.1.1 (A:) Even-skip 99.5 2.4E-14 1.7E-18 104.5 6.8 56 260-318 1-56 (57)
17 d9anta_ a.4.1.1 (A:) Antennape 99.5 2E-14 1.4E-18 105.0 6.0 56 262-320 1-56 (56)
18 d1pufa_ a.4.1.1 (A:) Homeobox 99.5 2.5E-14 1.8E-18 110.5 6.7 59 258-319 13-71 (77)
19 d1yz8p1 a.4.1.1 (P:1-60) Pitui 99.5 6.6E-15 4.8E-19 108.4 3.2 57 259-318 2-58 (60)
20 d1vnda_ a.4.1.1 (A:) VND/NK-2 99.5 3.3E-14 2.4E-18 109.8 7.1 61 258-321 9-69 (77)
21 d1zq3p1 a.4.1.1 (P:2-68) Homeo 99.5 2.8E-14 2E-18 107.4 5.8 58 259-319 2-59 (67)
22 d2ecba1 a.4.1.1 (A:8-83) Zinc 99.5 7.8E-14 5.7E-18 107.1 8.1 57 262-321 8-64 (76)
23 d2ecca1 a.4.1.1 (A:1-76) Homeo 99.4 5.7E-14 4.2E-18 107.8 7.0 57 261-320 6-62 (76)
24 d1b72a_ a.4.1.1 (A:) Homeobox 99.4 8.1E-14 5.9E-18 110.2 5.9 59 258-319 27-85 (88)
25 d1x2ma1 a.4.1.1 (A:8-59) Lag1 99.4 1.1E-13 7.7E-18 99.4 5.9 51 267-319 2-52 (52)
26 d2cuea1 a.4.1.1 (A:7-74) Paire 99.4 1.1E-13 7.9E-18 104.4 5.8 58 259-319 2-59 (68)
27 d2cufa1 a.4.1.1 (A:8-89) Homeo 99.4 1.6E-13 1.2E-17 106.8 4.9 59 260-321 2-75 (82)
28 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 99.4 2.5E-13 1.8E-17 105.3 5.9 62 258-319 17-79 (80)
29 d1uhsa_ a.4.1.1 (A:) Homeodoma 99.4 3.2E-13 2.3E-17 103.1 6.3 60 259-320 2-61 (72)
30 d2cqxa1 a.4.1.1 (A:8-66) LAG1 99.4 2.7E-13 1.9E-17 99.7 5.0 55 261-317 4-58 (59)
31 d1s7ea1 a.4.1.1 (A:103-152) He 99.4 1.3E-13 9.7E-18 97.7 3.2 49 262-313 2-50 (50)
32 d1lfba_ a.4.1.1 (A:) Hepatocyt 99.3 1.7E-12 1.2E-16 100.4 6.0 56 262-320 1-77 (78)
33 d2f66c1 a.2.17.3 (C:142-206) V 85.2 0.39 2.8E-05 34.3 3.7 27 127-153 33-59 (65)
34 d1ijwc_ a.4.1.2 (C:) HIN recom 75.1 3 0.00022 27.6 5.4 42 261-310 2-43 (47)
35 d1hlva1 a.4.1.7 (A:1-66) DNA-b 71.2 5.8 0.00043 28.0 6.5 47 262-314 5-51 (66)
36 d1rp3a2 a.4.13.2 (A:164-234) S 61.6 2.4 0.00017 29.0 2.6 47 264-318 21-67 (71)
37 d1or7a1 a.4.13.2 (A:120-187) S 61.6 2.4 0.00017 29.1 2.7 47 264-318 18-64 (68)
38 d1bl0a1 a.4.1.8 (A:9-62) MarA 41.0 7.8 0.00057 25.1 2.5 40 268-311 3-42 (54)
39 d1iufa1 a.4.1.7 (A:-2-75) Ars- 26.1 47 0.0034 24.0 4.8 30 259-290 6-35 (78)
40 d2a6ca1 a.35.1.13 (A:1-69) HTH 23.0 24 0.0017 23.8 2.5 22 292-313 23-44 (69)
41 d1y7ya1 a.35.1.3 (A:5-73) Rest 21.1 21 0.0015 24.0 1.9 20 293-312 27-46 (69)
42 d2croa_ a.35.1.2 (A:) cro 434 21.1 19 0.0014 23.9 1.7 22 291-312 19-40 (65)
43 d2ppxa1 a.35.1.3 (A:30-91) Unc 20.9 25 0.0018 23.4 2.2 21 292-312 16-36 (62)
44 d1b0na2 a.35.1.3 (A:1-68) SinR 20.6 21 0.0015 23.8 1.8 23 292-314 18-40 (68)
No 1
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.4e-19 Score=134.90 Aligned_cols=59 Identities=42% Similarity=0.879 Sum_probs=56.3
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcc
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 317 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~k 317 (345)
||++++||++++.+|+.||..|..+|||+.+++..||..|||+.+||.|||+|+|+|..
T Consensus 3 krkR~~~~~~~~~iL~~wf~~~~~nPyPs~~e~~~La~~~~l~~~qI~~WF~N~R~R~l 61 (62)
T d1x2na1 3 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRIL 61 (62)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHCcCHHHhHHHHHHHHHHhc
Confidence 56678999999999999999999999999999999999999999999999999999974
No 2
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=4.5e-19 Score=135.82 Aligned_cols=63 Identities=32% Similarity=0.613 Sum_probs=59.3
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCCC
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHANP 321 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~~ 321 (345)
||+++.|+++++.+|+.||.+|..+|||+.++|..||..|||+.+||.+||+|+|+|.|+...
T Consensus 2 rk~R~~~t~~q~~~Le~~f~~~~~~pYPs~~~k~~La~~~gl~~~qv~~WF~N~R~r~k~~~~ 64 (73)
T d1pufb_ 2 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIG 64 (73)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHCcCHHHhHHHHHHHHHHhcccch
Confidence 466789999999999999999999999999999999999999999999999999999997654
No 3
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=1.4e-18 Score=128.62 Aligned_cols=58 Identities=22% Similarity=0.509 Sum_probs=54.7
Q ss_pred CCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccC
Q 019151 262 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHA 319 (345)
Q Consensus 262 r~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~ 319 (345)
+.+|+++++.+|+.||..|..+|||+++++..||..+||+.+||.+||+|+|+|.|+.
T Consensus 2 ~~Rft~~q~~~L~~~f~~~~~~pyPs~~e~~~La~~~gL~~~qV~~WF~N~R~r~K~~ 59 (60)
T d1k61a_ 2 GHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKTI 59 (60)
T ss_dssp CCSCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHCcCHHHHhHHhHhhccccccC
Confidence 3469999999999999999999999999999999999999999999999999998753
No 4
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=8.6e-16 Score=116.73 Aligned_cols=64 Identities=27% Similarity=0.336 Sum_probs=58.1
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCCCCC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHANPSS 323 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~~s~ 323 (345)
.+|++..|++++..+|+.||... +|||+.+++..||..+||+..||.+||+|+|.|.|+..+++
T Consensus 7 ~~r~R~~~t~~Q~~~Le~~F~~~--~~~P~~~~~~~La~~lgl~~~qV~~WFqNrR~k~kk~~p~s 70 (71)
T d1wi3a_ 7 GPRSRTKISLEALGILQSFIHDV--GLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHSGPSS 70 (71)
T ss_dssp CCCCCCCCCSHHHHHHHHHHHHH--CSCCCHHHHHHHHHHSCCCHHHHHHHHHHHHHHCCSSCSSC
T ss_pred CCCCCccCCHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHhCCCHHHHHHHhHhhHhhhcccCCCC
Confidence 35677899999999999999753 69999999999999999999999999999999999877654
No 5
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=3.3e-15 Score=112.70 Aligned_cols=60 Identities=22% Similarity=0.466 Sum_probs=55.8
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHAN 320 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~ 320 (345)
++|+|..|+.++..+|+.+|.. +|||+.+++..||..+||++.||.+||+|+|.|.|+.+
T Consensus 8 ~rr~Rt~~t~~q~~~Le~~F~~---n~~P~~~~r~~La~~~~l~~~~V~~WFqNrR~k~Kk~s 67 (67)
T d1ocpa_ 8 RKRKRTSIENRVRWSLETMFLK---CPKPSLQQITHIANQLGLEKDVVRVWFCNRRQKGKRSS 67 (67)
T ss_dssp SSSCCSSCCHHHHHHHHHHHSS---CSCCCHHHHHHHHHHHTCCHHHHHHHHHHHHSSSSSCC
T ss_pred cCCCCCCCCHHHHHHHHHHHHH---ccCCCHHHHHHHHHHHcCCHHHHHHHhHHHHHHHhcCC
Confidence 4667789999999999999988 79999999999999999999999999999999998753
No 6
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.54 E-value=5.1e-15 Score=106.66 Aligned_cols=53 Identities=19% Similarity=0.372 Sum_probs=50.4
Q ss_pred CCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcc
Q 019151 262 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 317 (345)
Q Consensus 262 r~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~k 317 (345)
|..|+++++.+|+.+|.. +|||+..++..||..+||+++||.+||+|+|.|.|
T Consensus 1 Rt~~s~~q~~~Le~~F~~---~~~P~~~~~~~LA~~lgl~~~qV~~WFqNrR~k~K 53 (53)
T d1le8a_ 1 KSSISPQARAFLEQVFRR---KQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 53 (53)
T ss_dssp CCCCCHHHHHHHHHHHHH---CSCCCHHHHHHHHHHTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHCCCHHHHHHHHHhhhhccC
Confidence 467999999999999999 69999999999999999999999999999999875
No 7
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=5.7e-15 Score=108.47 Aligned_cols=57 Identities=18% Similarity=0.312 Sum_probs=53.6
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhccc
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWH 318 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk 318 (345)
+|+|..|+.++..+|+..|.. +|||+.+++..||..+||++.||.+||+|+|.|.||
T Consensus 2 rr~Rt~ft~~Q~~~Le~~F~~---~~yp~~~~r~~LA~~l~l~~~qV~vWFqNrR~k~kk 58 (58)
T d2craa1 2 RKKRIPYSKGQLRELEREYAA---NKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 58 (58)
T ss_dssp CCSCCCSCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHTTTS
T ss_pred CCCCCCCCHHHHHHHHHHHhh---cCCCCHHHHHHHHHHcCCCHHHeeecccchhhhccC
Confidence 456778999999999999999 799999999999999999999999999999999875
No 8
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.53 E-value=7.2e-15 Score=107.70 Aligned_cols=57 Identities=19% Similarity=0.391 Sum_probs=53.8
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccC
Q 019151 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHA 319 (345)
Q Consensus 260 rkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~ 319 (345)
|+|..|+.++..+|+.+|.. +|||+.+++..||..+||++.||.+||+|+|.|.|+.
T Consensus 1 r~Rt~~s~~q~~~Le~~F~~---~~~P~~~~~~~La~~l~l~~~~V~~WFqNrR~k~kr~ 57 (58)
T d1au7a1 1 KRRTTISIAAKDALERHFGE---HSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRV 57 (58)
T ss_dssp CCCCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHH---ccCCCHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Confidence 46789999999999999999 7999999999999999999999999999999998863
No 9
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.53 E-value=5.8e-15 Score=111.54 Aligned_cols=63 Identities=17% Similarity=0.261 Sum_probs=58.4
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCCCCC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHANPSS 323 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~~s~ 323 (345)
+||+|..|+..+..+|+..|.. +|||+..++..||..+||+..||.+||+|+|.|.++.....
T Consensus 2 krr~Rt~ft~~Ql~~Le~~F~~---~~yPs~~~r~~LA~~l~L~~~~V~~WFqNrR~k~kk~~~~~ 64 (68)
T d1ftta_ 2 RRKRRVLFSQAQVYELERRFKQ---QKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDK 64 (68)
T ss_dssp CSSSCSSCCHHHHHHHHHHHHH---SSSCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHhCCCccceeeecccHHHHHhhcccch
Confidence 5677889999999999999999 79999999999999999999999999999999999876543
No 10
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=5.1e-15 Score=108.14 Aligned_cols=57 Identities=23% Similarity=0.360 Sum_probs=53.5
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhccc
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWH 318 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk 318 (345)
|+.+..|++++..+|+.+|.. +|||+.+++..||..+||+.+||.+||+|+|.|.|+
T Consensus 1 k~~R~~ft~~Q~~~Le~~F~~---n~yp~~~~r~~LA~~l~L~~~qV~~WFqNrR~k~kk 57 (57)
T d2e1oa1 1 KGGQVRFSNDQTIELEKKFET---QKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 57 (57)
T ss_dssp CCCCCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHh---CCCCCHHHHHHHHHHhCCCHHHhhHhhhhhhhhccC
Confidence 456778999999999999999 799999999999999999999999999999999874
No 11
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.53 E-value=7.3e-15 Score=110.31 Aligned_cols=61 Identities=26% Similarity=0.361 Sum_probs=56.9
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCCC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHANP 321 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~~ 321 (345)
++|.|..|++++..+|+.+|.. +|||+.+++..||..+||+..||.+||+|+|.|.|+...
T Consensus 3 ~kR~Rt~~t~~Q~~~Le~~F~~---n~~Ps~~~~~~LA~~l~l~~~~V~~WFqNrR~k~kk~~~ 63 (66)
T d1bw5a_ 3 TTRVRTVLNEKQLHTLRTCYAA---NPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSI 63 (66)
T ss_dssp CSCCCCCCSHHHHHHHHHHHHH---CSCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHCSSCCC
T ss_pred CCCCCcCcCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHcCcCHHHhhhhhHhHHHHHHHHHH
Confidence 5677889999999999999999 799999999999999999999999999999999987653
No 12
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=9.1e-15 Score=106.86 Aligned_cols=57 Identities=19% Similarity=0.369 Sum_probs=53.9
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCC
Q 019151 261 RAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHAN 320 (345)
Q Consensus 261 kr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~ 320 (345)
||+.|+.+++.+|+.+|.. +|||+.+++..||..+||++.||.+||+|+|.|.|+.|
T Consensus 1 kRT~~~~~q~~~Le~~F~~---~~~P~~~~~~~LA~~lgL~~~qV~~WFqNrR~k~kk~n 57 (57)
T d1e3oc1 1 KRTSIETNIRVALEKSFME---NQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRIN 57 (57)
T ss_dssp CCCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTSCC
T ss_pred CCCCCCHHHHHHHHHHHHh---cCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHccC
Confidence 4678999999999999999 79999999999999999999999999999999999864
No 13
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=8.5e-15 Score=107.14 Aligned_cols=57 Identities=16% Similarity=0.258 Sum_probs=53.6
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhccc
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWH 318 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk 318 (345)
||++..|++++...|+..|.. +|||+.+++..||..+||+.+||.+||+|+|.|.|+
T Consensus 1 rr~Rt~ft~~Ql~~Le~~F~~---~~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~k~kr 57 (58)
T d1ig7a_ 1 RKPRTPFTTAQLLALERKFRQ---KQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 57 (58)
T ss_dssp CCCCCCCCHHHHHHHHHHHHH---CSCCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHhCCChhheeecCcchHhHhcc
Confidence 456779999999999999999 699999999999999999999999999999999875
No 14
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.50 E-value=1e-14 Score=109.15 Aligned_cols=60 Identities=23% Similarity=0.354 Sum_probs=55.3
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHAN 320 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~ 320 (345)
+||.|..|+.++..+|+.+|.. +|||+..++..||..+||+..||.+||+|+|.|.++..
T Consensus 2 ~rr~Rt~ft~~Q~~~Le~~F~~---n~yPs~~~r~~LA~~lgl~~~~V~~WFqNrR~k~kk~~ 61 (65)
T d1fjla_ 2 QRRSRTTFSASQLDELERAFER---TQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQH 61 (65)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHH---cCCCChHHHHHHHHHhCCCHHHhhHhhhhHHHHHHhcc
Confidence 4566778999999999999999 79999999999999999999999999999999988643
No 15
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=99.48 E-value=2.6e-14 Score=102.84 Aligned_cols=53 Identities=30% Similarity=0.424 Sum_probs=50.1
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhh
Q 019151 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 315 (345)
Q Consensus 260 rkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR 315 (345)
|+|..|++++...|+..|.. +|||+.+++..||..+||+..||.+||+|+|.|
T Consensus 1 R~Rt~ft~~Q~~~Le~~F~~---~~yp~~~~r~~LA~~lgL~~~qV~vWFqNrRaK 53 (53)
T d1p7ia_ 1 RPRTAFSSEQLARLKREFNE---NRYLTERRRQQLSSELGLNEAQIKIWFQNARAK 53 (53)
T ss_dssp CCCCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHhCCChHHhhhcccccCCC
Confidence 45778999999999999999 799999999999999999999999999999975
No 16
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.48 E-value=2.4e-14 Score=104.51 Aligned_cols=56 Identities=20% Similarity=0.308 Sum_probs=53.3
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhccc
Q 019151 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWH 318 (345)
Q Consensus 260 rkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk 318 (345)
|+|..|++++...|+..|.. +|||+..++..||..+||+..||.+||+|+|.|.|+
T Consensus 1 R~Rt~fT~~Ql~~Le~~F~~---~~yp~~~~r~~LA~~lgl~~~qV~vWFqNrR~k~kk 56 (57)
T d1jgga_ 1 RYRTAFTRDQLGRLEKEFYK---ENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKR 56 (57)
T ss_dssp CCCCCCCHHHHHHHHHHHHH---CSCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHhCCChhHhhhcchhhhhhhhc
Confidence 46788999999999999999 799999999999999999999999999999999886
No 17
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=99.48 E-value=2e-14 Score=104.96 Aligned_cols=56 Identities=21% Similarity=0.227 Sum_probs=52.7
Q ss_pred CCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCC
Q 019151 262 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHAN 320 (345)
Q Consensus 262 r~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~ 320 (345)
|..|++++...|+.+|.. +|||+..++..||..+||++.||.+||+|+|.|.|+.+
T Consensus 1 Rt~ft~~Q~~~Le~~F~~---~~yp~~~~r~~LA~~l~l~~~~V~iWFQNrRak~kk~~ 56 (56)
T d9anta_ 1 RQTYTRYQTLELEKEFHF---NRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN 56 (56)
T ss_dssp CCCCCHHHHHHHHHHHTT---CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCcCCHHHHHHHHHHHHh---CCCCCHHHHHHHHHHhCCChhHeeeccccchhhhhhcC
Confidence 468999999999999999 79999999999999999999999999999999998754
No 18
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=2.5e-14 Score=110.53 Aligned_cols=59 Identities=19% Similarity=0.255 Sum_probs=55.0
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHA 319 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~ 319 (345)
++|+|..|+.+++.+|+.+|.. +|||+..++..||..+||+++||.+||+|+|.|.|+.
T Consensus 13 ~rr~Rt~ft~~Ql~~Le~~F~~---~~yPs~~~r~~LA~~l~l~~~qV~iWFqNrR~k~kr~ 71 (77)
T d1pufa_ 13 TRKKRCPYTKHQTLELEKEFLF---NMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKI 71 (77)
T ss_dssp TSCCCCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHhCCCHHHhhhhhhhhHHHHHHH
Confidence 4566789999999999999999 7999999999999999999999999999999998864
No 19
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=6.6e-15 Score=108.42 Aligned_cols=57 Identities=19% Similarity=0.334 Sum_probs=53.8
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhccc
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWH 318 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk 318 (345)
||+|..|++++..+|+.+|.. +|||+..++..||..+||+..||.+||+|+|.|.|+
T Consensus 2 rr~Rt~ft~~Q~~~Le~~F~~---~~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~k~kr 58 (60)
T d1yz8p1 2 RRQRTHFTSQQLQQLEATFQR---NRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRK 58 (60)
T ss_dssp SCSCCCCCHHHHHHHHHHHTT---CSSCCTTTTTHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH---cCCCChHHHHHHHHHHCCChHHHHHHhHHHHHHHHh
Confidence 466789999999999999998 799999999999999999999999999999999875
No 20
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.47 E-value=3.3e-14 Score=109.78 Aligned_cols=61 Identities=20% Similarity=0.295 Sum_probs=55.7
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCCC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHANP 321 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~~ 321 (345)
++|+|..|+.++..+|+..|.. +|||+..++..||..+||+..||.+||+|+|.|.|+...
T Consensus 9 ~rr~Rt~ft~~Q~~~Le~~F~~---~~yP~~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~ 69 (77)
T d1vnda_ 9 KRKRRVLFTKAQTYELERRFRQ---QRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQN 69 (77)
T ss_dssp SCSSCCCCCTTHHHHHHHHHHH---CSCCCHHHHHHHHHHHTCCHHHHHHHHHHSSSSCSSSCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHhCCChhhhhhcchhHHHHHHHHhh
Confidence 3455668999999999999999 799999999999999999999999999999999887654
No 21
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.46 E-value=2.8e-14 Score=107.41 Aligned_cols=58 Identities=24% Similarity=0.350 Sum_probs=54.4
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccC
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHA 319 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~ 319 (345)
||+|..|+.++..+|+..|.. +|||+..++..||..+||+..||.+||+|+|.|.|+.
T Consensus 2 rr~Rt~ft~~Ql~~Le~~F~~---~~yp~~~~r~~LA~~l~l~~~~V~iWFqNrR~k~kk~ 59 (67)
T d1zq3p1 2 RRTRTTFTSSQIAELEQHFLQ---GRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQ 59 (67)
T ss_dssp SCCSCCCCHHHHHHHHHHHTT---CSSCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHhCCCccceeeccccHHHhHhhh
Confidence 466789999999999999999 7999999999999999999999999999999998864
No 22
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=7.8e-14 Score=107.11 Aligned_cols=57 Identities=23% Similarity=0.357 Sum_probs=52.0
Q ss_pred CCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCCC
Q 019151 262 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHANP 321 (345)
Q Consensus 262 r~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~~ 321 (345)
++.+++++..+|+.+|.. +|||+.+++..||..+||+..||.+||+|+|.|.++...
T Consensus 8 ~k~~T~~Q~~~Le~~F~~---~~~P~~~~r~~LA~~l~l~~~~V~~WFqNrR~r~k~~~~ 64 (76)
T d2ecba1 8 FKEKTAEQLRVLQASFLN---SSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEE 64 (76)
T ss_dssp CCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHSCCS
T ss_pred CCCCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHhCCCHHHHHHhHHHHHHHHHHHhH
Confidence 345799999999999999 799999999999999999999999999999999776554
No 23
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=5.7e-14 Score=107.80 Aligned_cols=57 Identities=26% Similarity=0.430 Sum_probs=52.5
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCC
Q 019151 261 RAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHAN 320 (345)
Q Consensus 261 kr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~ 320 (345)
.+++++++++.+|+.||.. +|||+.+++..||..|||+.+||.+||+|+|.+.|+..
T Consensus 6 ~~~r~T~eQ~~~Le~~F~~---n~~Ps~~~~~~La~~~gL~~~qV~~WF~NrR~k~k~~~ 62 (76)
T d2ecca1 6 SGKRKTKEQLAILKSFFLQ---CQWARREDYQKLEQITGLPRPEIIQWFGDTRYALKHGQ 62 (76)
T ss_dssp CCCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHH---cCCCCHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhch
Confidence 4457899999999999999 79999999999999999999999999999999988643
No 24
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=8.1e-14 Score=110.15 Aligned_cols=59 Identities=14% Similarity=0.187 Sum_probs=53.3
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHA 319 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~ 319 (345)
++|+|..|+.++..+|+.+|.. +|||+.+++..||..+||+..||.+||+|+|.|.|+.
T Consensus 27 ~kr~Rt~ft~~Ql~~Le~~F~~---n~yPs~~~r~~LA~~l~l~~~~V~vWFqNrR~k~Kk~ 85 (88)
T d1b72a_ 27 PSGLRTNFTTRQLTELEKEFHF---NKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKR 85 (88)
T ss_dssp ---CCCCCCHHHHHHHHHHHTT---CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCCHHHHHHHHHHHHh---CCCCchHHHHHHHHHcCCCHHHeeeccHhHHHHHHHh
Confidence 4566778999999999999998 7999999999999999999999999999999998864
No 25
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.41 E-value=1.1e-13 Score=99.44 Aligned_cols=51 Identities=16% Similarity=0.343 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccC
Q 019151 267 GDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHA 319 (345)
Q Consensus 267 k~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~ 319 (345)
.++..+|+.+|..+ +|||+.+++..||..+||+.+||.+||+|+|.|.|+.
T Consensus 2 ~~q~~iLE~~F~~~--~~~P~~~~~~~LA~~~~ls~~qV~~WFqNrR~k~k~s 52 (52)
T d1x2ma1 2 AQPNAILEKVFTAI--TKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPS 52 (52)
T ss_dssp SCHHHHHHHHHHTT--CSSCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHSCCS
T ss_pred hhHHHHHHHHHHHc--CCCcCHHHHHHHHHHHCcCHHHHHHHHHhhhcccCcC
Confidence 56789999999875 7999999999999999999999999999999998863
No 26
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=1.1e-13 Score=104.38 Aligned_cols=58 Identities=21% Similarity=0.327 Sum_probs=54.2
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccC
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHA 319 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~ 319 (345)
+|++..|+.++..+|+..|.. +|||+..++..||..+||++.||.+||+|+|.|.++.
T Consensus 2 rR~Rt~ft~~Ql~~Le~~F~~---n~yP~~~~r~~LA~~l~L~~~~V~~WFqNrR~k~kr~ 59 (68)
T d2cuea1 2 QRNRTSFTQEQIEALEKEFER---THYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 59 (68)
T ss_dssp CCCCCCSCHHHHHHHHHHHTT---CSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHH---cCCCCHHHHHHHHHHhCcChhheeecCcchhHHHHhh
Confidence 456789999999999999999 7999999999999999999999999999999998753
No 27
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1 (Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=1.6e-13 Score=106.81 Aligned_cols=59 Identities=15% Similarity=0.327 Sum_probs=54.3
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhC---------------CChhhhhhhhhhhhhhcccCCC
Q 019151 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETG---------------LQLKQINNWFINQRKRNWHANP 321 (345)
Q Consensus 260 rkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~Tg---------------Ls~kQV~NWFiN~RkR~kk~~~ 321 (345)
|+|..|++++..+|+.+|.. +|||+..++..||..+| |+..+|.+||+|+|.|.|+.+.
T Consensus 2 r~R~~ft~~Ql~~LE~~F~~---n~yP~~~~R~~LA~~~~~~~~~~~~~~~~~~~l~~~~V~vWFqNRR~k~kk~~~ 75 (82)
T d2cufa1 2 GSRFTWRKECLAVMESYFNE---NQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRAN 75 (82)
T ss_dssp CCSCCCCHHHHHHHHHHHHH---CSSCCHHHHHHHHHHHHHHHCCTTCCCCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHh---CCCCCHHHHHHHHHHhccccccccccchhccCCCHHHHHHHHhhhHHHHHHhhh
Confidence 56789999999999999999 79999999999999885 9999999999999999987554
No 28
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.37 E-value=2.5e-13 Score=105.30 Aligned_cols=62 Identities=15% Similarity=0.217 Sum_probs=56.0
Q ss_pred hhcCCCCCChhHHHHHHHHHHHcc-CCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccC
Q 019151 258 RKRRAGKLPGDTTSLLKAWWLSHA-KWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHA 319 (345)
Q Consensus 258 kkrkr~~lpk~a~~~L~~wf~~h~-~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~ 319 (345)
+||+|..|+.+++..|+.+|...+ .+|||+.+++..||+.+||+..||.+||+|+|.+.|+.
T Consensus 17 ~kR~Rt~ft~~Q~~~L~~~fe~~~~~~~~p~~~~~~~la~~~gl~~~~i~vWFqN~R~~~k~~ 79 (80)
T d1wh7a_ 17 TKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSGPSS 79 (80)
T ss_dssp SSCCCCCCCHHHHHHHHHHHHHHTSCCCSSTTHHHHHHHHHSCCCHHHHHHHHHTTSCCSCCC
T ss_pred CCCccccCCHHHHHHHHHHHHHhcccccCcCHHHHHHHHHHHCCCHHHeeeecccCcCCCCCC
Confidence 456788999999999999999764 48999999999999999999999999999999887753
No 29
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=3.2e-13 Score=103.06 Aligned_cols=60 Identities=17% Similarity=0.242 Sum_probs=54.1
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcccCC
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHAN 320 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk~~ 320 (345)
++++..|+.++..+|+.-|... ++||+..++..||..+||++.||.+||+|+|.|.++..
T Consensus 2 ~~~r~~fT~~Ql~~Le~~F~~~--n~yP~~~~r~~LA~~lgL~~~~VqvWFqNrRak~rk~~ 61 (72)
T d1uhsa_ 2 SEGAATMTEDQVEILEYNFNKV--NKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRSE 61 (72)
T ss_dssp CCCCCCCCHHHHHHHHHHHHSS--CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHc--cccCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcc
Confidence 3567799999999999999853 58999999999999999999999999999999988753
No 30
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=2.7e-13 Score=99.67 Aligned_cols=55 Identities=18% Similarity=0.328 Sum_probs=49.8
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhcc
Q 019151 261 RAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 317 (345)
Q Consensus 261 kr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~k 317 (345)
.+..+..++..+|+.+|..+ +|||+..++..||+.+||+..||.+||+|+|.+.|
T Consensus 4 ~~~~~k~~~~~iLE~~F~~~--~~yPs~~~~~~LA~~lgls~~qV~~WFqNrR~k~r 58 (59)
T d2cqxa1 4 DSPVNKVEPNDTLEKVFVSV--TKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRNQDK 58 (59)
T ss_dssp CCCCSCSCSTTHHHHHHHHT--CSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCccccHHHHHHHHHc--CCCcCHHHHHHHHHHHCcCHHHHHHHHHhhhcccC
Confidence 45567888889999999875 79999999999999999999999999999999865
No 31
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=1.3e-13 Score=97.69 Aligned_cols=49 Identities=24% Similarity=0.360 Sum_probs=47.0
Q ss_pred CCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhh
Q 019151 262 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQR 313 (345)
Q Consensus 262 r~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~R 313 (345)
|..|++++..+|+.+|.. +|||+.+++..||..+||+.+||.+||+|+|
T Consensus 2 Rt~ft~~Q~~~Le~~F~~---n~~P~~~~~~~LA~~l~l~~~~V~~WFqNrR 50 (50)
T d1s7ea1 2 RLVFTDVQRRTLHAIFKE---NKRPSKELQITISQQLGLELSTVSNFFMNAR 50 (50)
T ss_dssp CSCCCHHHHHHHHHHTTS---SCSSTHHHHHHHHTTSCSSSHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHHHH---CCCCCHHHHHHHHHHHCcCHHHhhhcCCcCc
Confidence 568999999999999987 7999999999999999999999999999997
No 32
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat (Rattus rattus) [TaxId: 10117]}
Probab=99.28 E-value=1.7e-12 Score=100.42 Aligned_cols=56 Identities=23% Similarity=0.351 Sum_probs=51.7
Q ss_pred CCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhC---------------------CChhhhhhhhhhhhhhcccCC
Q 019151 262 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETG---------------------LQLKQINNWFINQRKRNWHAN 320 (345)
Q Consensus 262 r~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~Tg---------------------Ls~kQV~NWFiN~RkR~kk~~ 320 (345)
|.+|++.+..+|+.+|.. +|||+..+|..||+.++ |+..||.|||+|+|+|.|+..
T Consensus 1 R~~~tp~Ql~~Le~~F~~---n~yPs~~~Re~LA~~ln~~~~~~~~~~~~~~~~~~~~~vt~~~V~~WF~NRR~~~kr~~ 77 (78)
T d1lfba_ 1 RFKWGPASQQILFQAYER---QKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRH 77 (78)
T ss_dssp CCCCCHHHHHHHHHHHTT---CSSCCHHHHHHHHHHHHHHHHTTTTCCTTCTTTTGGGCCCHHHHHHHHHHHHHTTSCCC
T ss_pred CccCCHHHHHHHHHHHHh---CCCCCHHHHHHHHHHhchhhhccccccccccccccccCCCHHHHHHHHHHHHHHHHHhc
Confidence 357999999999999999 79999999999999994 899999999999999998754
No 33
>d2f66c1 a.2.17.3 (C:142-206) Vacuolar protein sorting-associated protein 37, VPS37 (SRN2) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.23 E-value=0.39 Score=34.27 Aligned_cols=27 Identities=19% Similarity=0.407 Sum_probs=22.6
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHh
Q 019151 127 RVLDDKELDQFMTHYVLLLYSFKEQLQ 153 (345)
Q Consensus 127 ~~g~dpELDqFMeaYc~vL~kykEEL~ 153 (345)
.+..+.|||+|+++|.++.+.|+-.=+
T Consensus 33 ~~~~s~elD~Fi~qYl~~RTeYH~rRE 59 (65)
T d2f66c1 33 SIDSADDLDQFIKNYLDIRTQYHLRRE 59 (65)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 355779999999999999999986543
No 34
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=75.06 E-value=3 Score=27.58 Aligned_cols=42 Identities=12% Similarity=0.217 Sum_probs=35.8
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhh
Q 019151 261 RAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 310 (345)
Q Consensus 261 kr~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFi 310 (345)
|+.+|+.++....+..+.. ..| +..+|+.+|++..-|.+||.
T Consensus 2 R~~~lt~~q~~~a~~l~~~----G~s----~~~iA~~~gVSr~TiYry~p 43 (47)
T d1ijwc_ 2 RPRAINKHEQEQISRLLEK----GHP----RQQLAIIFGIGVSTLYRYFP 43 (47)
T ss_dssp CCCSSCHHHHHHHHHHHHT----TCC----HHHHHHHHTCCHHHHHHHSC
T ss_pred CCCcCCHHHHHHHHHHHHC----CCC----HHHHHHHHCcCHHHHHhhCC
Confidence 3568999999999999876 433 77899999999999999984
No 35
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.21 E-value=5.8 Score=28.04 Aligned_cols=47 Identities=13% Similarity=0.090 Sum_probs=34.5
Q ss_pred CCCCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhh
Q 019151 262 AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRK 314 (345)
Q Consensus 262 r~~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~Rk 314 (345)
|..|+-..+..+-..+..+ |-.+ +..+|+.+|+...+|++|..|+.+
T Consensus 5 Rk~LT~~eK~~ii~~~e~g---~k~s---q~eIA~~fGv~~STvs~IlKnK~k 51 (66)
T d1hlva1 5 RRQLTFREKSRIIQEVEEN---PDLR---KGEIARRFNIPPSTLSTILKNKRA 51 (66)
T ss_dssp SCCCCHHHHHHHHHHHHHC---TTSC---HHHHHHHHTCCHHHHHHHHHTHHH
T ss_pred cccCCHHHHHHHHHHHHcC---Ccch---HHHHHHHhCCChhHHHHHHHHHHH
Confidence 3457777665555666773 4333 457999999999999999999754
No 36
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=61.61 E-value=2.4 Score=29.03 Aligned_cols=47 Identities=9% Similarity=0.130 Sum_probs=39.5
Q ss_pred CCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhccc
Q 019151 264 KLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWH 318 (345)
Q Consensus 264 ~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk 318 (345)
.||+..+.++.-.|... + .-..+|+.+|++...|.+.....|++.++
T Consensus 21 ~L~~~~r~v~~l~~~~~--~------s~~eIA~~lgis~~tv~~~~~ra~~~Lr~ 67 (71)
T d1rp3a2 21 KLPEREKLVIQLIFYEE--L------PAKEVAKILETSVSRVSQLKAKALERLRE 67 (71)
T ss_dssp TSCHHHHHHHHHHHTSC--C------CHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhHh--C------CHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 58999999998777663 2 24579999999999999999999998875
No 37
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=61.58 E-value=2.4 Score=29.12 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=38.9
Q ss_pred CCChhHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhhhhhhccc
Q 019151 264 KLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWH 318 (345)
Q Consensus 264 ~lpk~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN~RkR~kk 318 (345)
.||+..+.++.-.|... ++ -..+|+..|++...|.+++...|++.++
T Consensus 18 ~Lp~~~r~v~~l~~~~~----~s----~~eIA~~lgis~~tv~~~l~ra~~~Lr~ 64 (68)
T d1or7a1 18 SLPEDLRMAITLRELDG----LS----YEEIAAIMDCPVGTVRSRIFRAREAIDN 64 (68)
T ss_dssp HSCHHHHHHHHHHHTTC----CC----HHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhC----CC----HHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 48899999998887774 22 3479999999999999999999998764
No 38
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=41.04 E-value=7.8 Score=25.10 Aligned_cols=40 Identities=13% Similarity=0.220 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHccCCCCCCHHHHHHHHHHhCCChhhhhhhhhh
Q 019151 268 DTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 311 (345)
Q Consensus 268 ~a~~~L~~wf~~h~~~PYPS~~eK~~LA~~TgLs~kQV~NWFiN 311 (345)
.....+..|...|+..| ++- ..||+..|++..++..+|..
T Consensus 3 ~~i~~v~~yI~~~~~~~-~tl---~~lA~~~~~s~~~l~r~Fk~ 42 (54)
T d1bl0a1 3 ITIHSILDWIEDNLESP-LSL---EKVSERSGYSKWHLQRMFKK 42 (54)
T ss_dssp HHHHHHHHHHHTTTTSC-CCC---HHHHHHSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCC-CCH---HHHHHHHCcCHHHHHHHHHH
Confidence 34667889999998888 443 46889999999999999975
No 39
>d1iufa1 a.4.1.7 (A:-2-75) Ars-binding protein 1, ABP1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=26.11 E-value=47 Score=23.95 Aligned_cols=30 Identities=10% Similarity=0.207 Sum_probs=22.2
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCCCCHHH
Q 019151 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTEED 290 (345)
Q Consensus 259 krkr~~lpk~a~~~L~~wf~~h~~~PYPS~~e 290 (345)
+.+|.-++-+++..|+.|+.+. +|.|+-.+
T Consensus 6 ~~~R~aIs~~qK~ALR~~~~~~--~~~~sqk~ 35 (78)
T d1iufa1 6 KIKRRAITEHEKRALRHYFFQL--QNRSGQQD 35 (78)
T ss_dssp CCSSSCCCSHHHHHHHHHHHSS--SSCCCHHH
T ss_pred ccccccCCHHHHHHHHHHHHhc--CCCccHHH
Confidence 4456789999999999997553 68776443
No 40
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=22.97 E-value=24 Score=23.84 Aligned_cols=22 Identities=5% Similarity=0.135 Sum_probs=19.1
Q ss_pred HHHHHHhCCChhhhhhhhhhhh
Q 019151 292 ARLVQETGLQLKQINNWFINQR 313 (345)
Q Consensus 292 ~~LA~~TgLs~kQV~NWFiN~R 313 (345)
..||+.+|+++..|+.|.-++-
T Consensus 23 ~elA~~~gv~~~~is~ie~g~~ 44 (69)
T d2a6ca1 23 FKAAELLGVTQPRVSDLMRGKI 44 (69)
T ss_dssp HHHHHHHTSCHHHHHHHHTTCG
T ss_pred HHHHHHHHcCHhHHHHHHcccc
Confidence 4789999999999999998653
No 41
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=21.12 E-value=21 Score=23.95 Aligned_cols=20 Identities=20% Similarity=0.099 Sum_probs=17.9
Q ss_pred HHHHHhCCChhhhhhhhhhh
Q 019151 293 RLVQETGLQLKQINNWFINQ 312 (345)
Q Consensus 293 ~LA~~TgLs~kQV~NWFiN~ 312 (345)
.||+.+|++..+|++|-.++
T Consensus 27 ~lA~~~gis~~~i~~~E~g~ 46 (69)
T d1y7ya1 27 TLAFLSGLDRSYVGGVERGQ 46 (69)
T ss_dssp HHHHHHTCCHHHHHHHHTTC
T ss_pred HHHhHhCCCHHHHHHHHCCC
Confidence 68999999999999998765
No 42
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=21.07 E-value=19 Score=23.85 Aligned_cols=22 Identities=14% Similarity=0.191 Sum_probs=18.7
Q ss_pred HHHHHHHhCCChhhhhhhhhhh
Q 019151 291 KARLVQETGLQLKQINNWFINQ 312 (345)
Q Consensus 291 K~~LA~~TgLs~kQV~NWFiN~ 312 (345)
...||+.+|++...|++|-.+.
T Consensus 19 q~~lA~~~gvs~~ti~~~E~g~ 40 (65)
T d2croa_ 19 QTELATKAGVKQQSIQLIEAGV 40 (65)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTC
T ss_pred HHHHHHHHCcCHhHHHHHHCCC
Confidence 3478999999999999997653
No 43
>d2ppxa1 a.35.1.3 (A:30-91) Uncharacterized protein Atu1735 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=20.88 E-value=25 Score=23.42 Aligned_cols=21 Identities=10% Similarity=0.309 Sum_probs=18.2
Q ss_pred HHHHHHhCCChhhhhhhhhhh
Q 019151 292 ARLVQETGLQLKQINNWFINQ 312 (345)
Q Consensus 292 ~~LA~~TgLs~kQV~NWFiN~ 312 (345)
..||+.+|++...|++|=.++
T Consensus 16 ~elA~~lGvs~~tvs~~E~G~ 36 (62)
T d2ppxa1 16 EEFSARYHIPLGTLRDWEQGR 36 (62)
T ss_dssp HHHHHHHTCCHHHHHHHHTTS
T ss_pred HHHHHHhCCCHHHHHHHHCCC
Confidence 478999999999999997764
No 44
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=20.55 E-value=21 Score=23.84 Aligned_cols=23 Identities=13% Similarity=0.203 Sum_probs=19.8
Q ss_pred HHHHHHhCCChhhhhhhhhhhhh
Q 019151 292 ARLVQETGLQLKQINNWFINQRK 314 (345)
Q Consensus 292 ~~LA~~TgLs~kQV~NWFiN~Rk 314 (345)
..||+.+|++...|+.|--+.|.
T Consensus 18 ~~la~~~gis~~~i~~~E~g~~~ 40 (68)
T d1b0na2 18 SELAEKAGVAKSYLSSIERNLQT 40 (68)
T ss_dssp HHHHHHHTCCHHHHHHHHTTCCS
T ss_pred HHHHHHHCCCHHHHHHHHcCCCC
Confidence 47899999999999999987643
Done!