BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019153
(345 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66GR0|FLA17_ARATH Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana
GN=FLA17 PE=2 SV=1
Length = 458
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/292 (71%), Positives = 241/292 (82%), Gaps = 11/292 (3%)
Query: 1 MDPQIYG-------LAFFFLLVVPSVTALPHKTTSSSSQPQINSNSVLVALLDSHYTELA 53
MD +IYG FF +L+ + +AL + SS QINSNSVLVALLDS YTELA
Sbjct: 1 MDRRIYGGSAVIHLFLFFSVLIFSAASALSKNQSPSSGSGQINSNSVLVALLDSRYTELA 60
Query: 54 ELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHI 113
ELVEKALLLQTLE+AVGRHNITIFAP+NEALER+LDPEFKRFLLEPGN+KSLQTLLMFHI
Sbjct: 61 ELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHI 120
Query: 114 LPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGI 173
+P+R+GS WP E+SG KH+TL ND V LS+ K+++ AEI RPDD+TRPDG+IHGI
Sbjct: 121 IPNRVGSNQWPSEESGRVKHHTLGNDQVRLSNGQGKKMVDLAEIIRPDDLTRPDGLIHGI 180
Query: 174 ERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKPAAPVPAGAPPILPIYDA 233
ERLL+PRSVQEDFNRRR+L+SISAVLP+GAPEVDPRT+RLKKPAAPVPAG+PP LPI A
Sbjct: 181 ERLLIPRSVQEDFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSA 240
Query: 234 MAPGPSLAPAPAPGPGGAHRHFNGERQVKDFIHTLLHYGQRNGGYSGELDVV 285
MAPGPSLAPAPAPGPGG HF+GE QVKDFIHTLLHY GGY+ D++
Sbjct: 241 MAPGPSLAPAPAPGPGGKQHHFDGEAQVKDFIHTLLHY----GGYNEMADIL 288
>sp|Q93W32|FLA18_ARATH Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana
GN=FLA18 PE=2 SV=1
Length = 462
Score = 358 bits (919), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 209/298 (70%), Positives = 239/298 (80%), Gaps = 20/298 (6%)
Query: 1 MDPQIYG-------LAFFFLLVVPSVTALPHKTTSSSSQPQINSNSVLVALLDSHYTELA 53
MD IYG +FFFLL ++ + H T S QINSNSVLVALLDS YTELA
Sbjct: 1 MDRCIYGCSVITIFFSFFFLLNASALESGHHNITGSG---QINSNSVLVALLDSRYTELA 57
Query: 54 ELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHI 113
ELVEKALLLQTLE+AVGRHNITIFAP+NEALER+LDP+FKRFLL+PGN+KSLQTLL+ HI
Sbjct: 58 ELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSLQTLLLSHI 117
Query: 114 LPSRIGSRNWPDEKSGSRKHNTLWNDFV-HLSS---KSSKRLIGSAEIFRPDDITRPDGV 169
+P R+GS WP+E SG KH TL +D V HLS + KRL+ SA I RPDD+TRPDG+
Sbjct: 118 IPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNSAVITRPDDLTRPDGL 177
Query: 170 IHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKK--PAAPVPAGAPPI 227
IHGIERLL+PRSVQEDFNRRRNLRSISAVLP+GAPE+DPRT+RLKK A VPAG+PP+
Sbjct: 178 IHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEIDPRTNRLKKSATAVSVPAGSPPV 237
Query: 228 LPIYDAMAPGPSLAPAPAPGPGGAHRHFNGERQVKDFIHTLLHYGQRNGGYSGELDVV 285
LPI AMAPGPSLAPAPAPGPGGAH+HFNG+ QVKDFIHTLLHY GGY+ D++
Sbjct: 238 LPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFIHTLLHY----GGYNEMADIL 291
>sp|Q8RWC5|FLA16_ARATH Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana
GN=FLA16 PE=2 SV=1
Length = 445
Score = 346 bits (888), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/252 (75%), Positives = 213/252 (84%), Gaps = 7/252 (2%)
Query: 34 QINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFK 93
QINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVG+HNITIFAP+N+ALER LDP FK
Sbjct: 33 QINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFK 92
Query: 94 RFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIG 153
FLLEP N+KSLQ+LLMFHILP RI S WP S S H TL ND +HL+ + +
Sbjct: 93 SFLLEPRNLKSLQSLLMFHILPKRITSPQWP---SLSHHHRTLSNDHLHLTVDVNTLKVD 149
Query: 154 SAEIFRPDDITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRL 213
SAEI RPDD+ RPDG+IHGIERLL+PRSVQEDFNRRR+LRSISAV+P+GAPEVDPRTHRL
Sbjct: 150 SAEIIRPDDVIRPDGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRL 209
Query: 214 KKPAAPVPAGAPPILPIYDAMAPGPSLAPAPAPGPGGAHRHFNGERQVKDFIHTLLHYGQ 273
KKP+ VPAGAPP+LPIYDAM+PGPSLAPAPAPGPGG HFNG+ QVKDFIHTLLHY
Sbjct: 210 KKPSPAVPAGAPPVLPIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHY-- 267
Query: 274 RNGGYSGELDVV 285
GGY+ D++
Sbjct: 268 --GGYNEMADIL 277
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 48 HYTELAELVEKALLLQTLEEAVGR-----HNITIFAPKNEALERELDPEFKRFLLEPGNV 102
HY E+ + + L +L +GR + +T+ AP +EA+ + + L EPG
Sbjct: 266 HYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQ----LSEPG-- 319
Query: 103 KSLQTLLMFHILPSRIGSRNWPD--EKSGSRKHNTLWNDFVHLSSKSSKRLI-----GSA 155
+ + ++ +HI+P + + + G K+++L L+ ++ + GSA
Sbjct: 320 -APEQIMYYHIIPEYQTEESMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSA 378
Query: 156 EIFRPDDITRPDGVIHGIERLLVPR 180
+F PD T + GI+ +L P+
Sbjct: 379 YLFDPDIYTDGRISVQGIDGVLFPK 403
>sp|Q9FT45|FLA15_ARATH Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana
GN=FLA15 PE=2 SV=1
Length = 436
Score = 320 bits (821), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 193/267 (72%), Positives = 218/267 (81%), Gaps = 15/267 (5%)
Query: 19 VTALPHKTTSSSSQPQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGRHNITIFA 78
TALP K S QINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVG+HNITIFA
Sbjct: 18 TTALPDKPGSG----QINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFA 73
Query: 79 PKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWN 138
P+N+ALE+ LDPEFK FLL+P N+KSLQ+LLMFHILP RI S P S H TL N
Sbjct: 74 PRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITS---PQFSSAVVSHRTLSN 130
Query: 139 DFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAV 198
D +H ++ + SAEI +PDD+TRPDG+IHGIERLL+PRSVQEDFNRRR+LRSI+AV
Sbjct: 131 DHLHFTNGK----VNSAEITKPDDLTRPDGIIHGIERLLIPRSVQEDFNRRRSLRSIAAV 186
Query: 199 LPQGAPEVDPRTHRLKKPAAPVPAGAPPILPIYDAMAPGPSLAPAPAPGPGGAHRHFNGE 258
LP+GAPEVDPRTHRLKK AP+PAGAPP+LP+YDAM+PGPSLAPAPAPGPGG HFNGE
Sbjct: 187 LPEGAPEVDPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHFNGE 246
Query: 259 RQVKDFIHTLLHYGQRNGGYSGELDVV 285
QVKDFIHTLLHY GGY+ D++
Sbjct: 247 AQVKDFIHTLLHY----GGYNEMADIL 269
>sp|Q62009|POSTN_MOUSE Periostin OS=Mus musculus GN=Postn PE=1 SV=2
Length = 838
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 59 ALLLQTLEEAVGRH-NITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSR 117
A + L E++GR + T+FAP NEA E+ +R + G+ + + L+ +HIL
Sbjct: 255 AAITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIM---GDKVASEALMKYHIL--- 308
Query: 118 IGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLL 177
+ + +G T+ + + + + I ++ DI +GVIH I+ +L
Sbjct: 309 -NTLQCSEAITGGAVFETMEGNTIEIGCEGDSISINGIKMVNKKDIVTKNGVIHLIDEVL 367
Query: 178 VPRSVQE 184
+P S ++
Sbjct: 368 IPDSAKQ 374
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 43 ALLDSHYTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNV 102
A HY+++++L EE G+ + T FAP NEA E LD + +R L NV
Sbjct: 112 ATTTQHYSDVSKL---------REEIEGKGSYTYFAPSNEAWEN-LDSDIRRGLENNVNV 161
Query: 103 KSLQTLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDD 162
+ L L H++ R+ +++ +N L H + + A + +
Sbjct: 162 ELLNA-LHSHMVNKRMLTKDLKHGMVIPSMYNNLGLFINHYPNGVVT--VNCARVIHGNQ 218
Query: 163 ITRPDGVIHGIERLL--VPRSVQEDFNRRRNLRSISA 197
I +GV+H I+R+L + S+Q+ +L S A
Sbjct: 219 IA-TNGVVHVIDRVLTQIGTSIQDFLEAEDDLSSFRA 254
>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3
Length = 2551
Score = 45.1 bits (105), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 32 QPQINSNS--VLVALLDSHYTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELD 89
+P SN+ ++ +L Y++ L+E+ L L+E TIF P NEAL D
Sbjct: 509 EPTFESNNEQTIMTMLQPRYSKFRSLLEETNLGHALDEDGVGGPYTIFVPNNEALNNMKD 568
Query: 90 PEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRKH-NTLWNDFVHLSSKSS 148
+LL P + L L+ +HI+P S H ++ N + ++ +
Sbjct: 569 GTLD-YLLSPEGSRKLLELVRYHIVP----FTQLEVATLISTPHIRSMANQLIQFNTTDN 623
Query: 149 KRLIGSAEIFRPDDITRPDGVIHGIERLLVPRSV 182
+++ + +IT +G I+ + +L+P S+
Sbjct: 624 GQILANDVAMEEIEITAKNGRIYTLTGVLIPPSI 657
Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 73 NITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDEKSGSRK 132
N+T+ P +A E ++D + K F L N+ +L + +H+L + S
Sbjct: 1028 NLTVLVPSQQATE-DMDQDEKSFWLSQSNIPAL---IKYHMLLGTYRVADLQTLSSSDML 1083
Query: 133 HNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPR 180
+L +F+HL+ I A I D+ +GVIH I ++LVP+
Sbjct: 1084 ATSLQGNFLHLAKVDGNITIEGASIVDGDNAA-TNGVIHIINKVLVPQ 1130
>sp|O11780|BGH3_PIG Transforming growth factor-beta-induced protein ig-h3 OS=Sus scrofa
GN=TGFBI PE=1 SV=1
Length = 683
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 36/179 (20%)
Query: 62 LQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSR 121
L TL E G++ T+ AP NEA E+ R L +P ++L+ LL HIL S + +
Sbjct: 265 LNTLLEGDGQY--TLLAPSNEAFEKIPAETLNRILGDP---EALRDLLNNHILKSAMCA- 318
Query: 122 NWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRS 181
+ TL + + I I D+ +GVIH I+ LL+P S
Sbjct: 319 ---EAIVAGLSLETLEGTTLEVGCSGDMLTINGKPIISNKDVLATNGVIHFIDELLIPDS 375
Query: 182 VQEDF--------------------------NRRRNLRS-ISAVLPQGAPEVDPRTHRL 213
+ F N R L + +++V G P +D RT L
Sbjct: 376 AKTLFELAAESDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNL 434
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 46 DSHYTELAELVEKALLLQTLE-EAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKS 104
D+ ++ L ++ A L +TL E V T+FAP NEA + E + L GN K
Sbjct: 512 DNRFSMLVAAIQSAGLTETLNREGV----YTVFAPTNEAFQALPLGERNKLL---GNAKE 564
Query: 105 LQTLLMFHILPSRIGSRNWPDEKSGSR-KHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDI 163
L +L +H +G G+ + +L D + +SSK+S + + E DI
Sbjct: 565 LANILKYH-----VGDEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTV-NKEPVAEADI 618
Query: 164 TRPDGVIHGIERLLVP 179
+GV+H I +L P
Sbjct: 619 MATNGVVHTINTVLRP 634
>sp|Q15582|BGH3_HUMAN Transforming growth factor-beta-induced protein ig-h3 OS=Homo
sapiens GN=TGFBI PE=1 SV=1
Length = 683
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 62 LQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSR 121
L T+ E G++ T+ AP NEA E+ R L +P ++L+ LL HIL S + +
Sbjct: 265 LNTMLEGNGQY--TLLAPTNEAFEKIPSETLNRILGDP---EALRDLLNNHILKSAMCA- 318
Query: 122 NWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRS 181
+ TL + + I I DI +GVIH I+ LL+P S
Sbjct: 319 ---EAIVAGLSVETLEGTTLEVGCSGDMLTINGKAIISNKDILATNGVIHYIDELLIPDS 375
Query: 182 VQEDF 186
+ F
Sbjct: 376 AKTLF 380
>sp|Q15063|POSTN_HUMAN Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2
Length = 836
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 67 EAVGRH-NITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPD 125
EA+GR + T+FAP NEA E+ +R + G+ + + L+ +HIL + +
Sbjct: 261 EALGRDGHFTLFAPTNEAFEKLPRGVLERIM---GDKVASEALMKYHIL----NTLQCSE 313
Query: 126 EKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRSVQE 184
G TL + + + + ++ DI +GVIH I+++L+P S ++
Sbjct: 314 SIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQ 372
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 66 EEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPD 125
EE G+ + T FAP NEA + LD + +R L NV+ L L H++ R+ +++ +
Sbjct: 124 EEIEGKGSFTYFAPSNEAWDN-LDSDIRRGLESNVNVELLNA-LHSHMINKRMLTKDLKN 181
Query: 126 EKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLL--VPRSVQ 183
+N L H + + A I + I +GV+H I+R+L + S+Q
Sbjct: 182 GMIIPSMYNNLGLFINHYPNGVVT--VNCARIIHGNQIA-TNGVVHVIDRVLTQIGTSIQ 238
Query: 184 EDFNRRRNLRSISA 197
+ +L S A
Sbjct: 239 DFIEAEDDLSSFRA 252
>sp|P82198|BGH3_MOUSE Transforming growth factor-beta-induced protein ig-h3 OS=Mus
musculus GN=Tgfbi PE=2 SV=1
Length = 683
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 62 LQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSR 121
L T+ E G+ T+ AP NEA E+ R L +P ++L+ LL HIL S + +
Sbjct: 265 LNTVLEGDGQ--FTLLAPTNEAFEKIPAETLNRILGDP---EALRDLLNNHILKSAMCA- 318
Query: 122 NWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRS 181
+ TL + + K I + DI +GVIH I+ LL+P S
Sbjct: 319 ---EAIVAGMSMETLGGTTLEVGCSGDKLTINGKAVISNKDILATNGVIHFIDELLIPDS 375
Query: 182 VQ 183
+
Sbjct: 376 AK 377
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 46 DSHYTELAELVEKALLLQTLEEAVGRHNI-TIFAPKNEALERELDPEFKRFLLEPGNVKS 104
D+ ++ L ++ A L++ L R + T+FAP NEA + E + L N K
Sbjct: 512 DNRFSMLVAAIQSAGLMEIL----NREGVYTVFAPTNEAFQAMPPEELNKLL---ANAKE 564
Query: 105 LQTLLMFHILPSRIGSRNWPDEKSGSR-KHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDI 163
L +L +H IG G+ + +L D + +SSK++ + + E DI
Sbjct: 565 LTNILKYH-----IGDEILVSGGIGALVRLKSLQGDKLEVSSKNNVVSV-NKEPVAETDI 618
Query: 164 TRPDGVIHGIERLLVP 179
+GV++ I +L P
Sbjct: 619 MATNGVVYAINTVLQP 634
>sp|P74615|Y1483_SYNY3 Uncharacterized protein sll1483 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1483 PE=4 SV=1
Length = 180
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 15/173 (8%)
Query: 12 FLLVVPSVTALPHKTTSSS---SQPQINSNSVLVALL--DSHYTELAELVEKALLLQTLE 66
F L +P+V +TT S SQ +S +V + + ++ L V+ A L++ L
Sbjct: 16 FALGMPTVAMAEMETTEKSAVVSQAATDSAMTIVEVAAGNETFSTLVAAVKAADLVEALS 75
Query: 67 EAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSRNWPDE 126
T+FAP N+A L LL P N L +L +H++P +I +
Sbjct: 76 ---AEGPFTVFAPTNDAFAA-LPAGTVESLLLPENKDKLVKILTYHVVPGKITAAQVQSG 131
Query: 127 KSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVP 179
+ S L + + K K + A + D+ +GVIH I+++++P
Sbjct: 132 EVAS-----LAGEALTFKVKDGKVKVNKATVISA-DVDASNGVIHVIDQVILP 178
>sp|Q95215|BGH3_RABIT Transforming growth factor-beta-induced protein ig-h3
OS=Oryctolagus cuniculus GN=TGFBI PE=2 SV=2
Length = 683
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 62 LQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPSRIGSR 121
L TL E+ G+ T+ AP NEA E+ R L +P ++L+ LL HIL S + +
Sbjct: 265 LNTLLESDGQ--FTLLAPTNEAKEKIPTETLNRILGDP---EALRDLLNNHILKSAMCA- 318
Query: 122 NWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRS 181
+ TL + + I I D+ +GVIH I+ LL+P S
Sbjct: 319 ---EAIVAGLSMETLEATTLEVGCSGDMLTINGKAIISNKDVLATNGVIHFIDELLIPDS 375
Query: 182 VQ 183
+
Sbjct: 376 AK 377
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 55 LVEKALLLQTLEEAVGRHN-ITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHI 113
++ A+ + L E + R T+FAP NEA + E + L GN K L +L +H
Sbjct: 517 MLVAAIQFRRLTETLNREGAYTVFAPTNEAFQALPPGELNKLL---GNAKELADILKYH- 572
Query: 114 LPSRIGSRNWPDEKSGSR-KHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHG 172
+G G+ + +L D + +SSK++ + + E DI +GV++
Sbjct: 573 ----VGEEILVSGGIGTLVRLKSLQGDKLEVSSKNNAVSV-NKEPVAESDIMATNGVVYA 627
Query: 173 IERLLVP 179
I +L P
Sbjct: 628 ITSVLQP 634
>sp|Q8CFM6|STAB2_RAT Stabilin-2 (Fragment) OS=Rattus norvegicus GN=Stab2 PE=1 SV=1
Length = 1431
Score = 41.2 bits (95), Expect = 0.012, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 49 YTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTL 108
YT+ ++L++ + LL + +++ +T+F P ++ALE L PE + FL N L++
Sbjct: 617 YTKFSKLIQDSGLLSVITDSI-HTPVTVFWPTDKALE-ALPPEQQDFLFNQDNKDKLKSY 674
Query: 109 LMFHIL 114
L FH++
Sbjct: 675 LKFHVI 680
>sp|Q8R4U0|STAB2_MOUSE Stabilin-2 OS=Mus musculus GN=Stab2 PE=1 SV=1
Length = 2559
Score = 40.8 bits (94), Expect = 0.017, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 32 QPQINSN--SVLVALLDSHYTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELD 89
+P + SN ++ +L Y + L+EK + Q LE+ TIF P NEAL +
Sbjct: 516 EPTLESNPQQTIMTMLQPRYGKFRSLLEKTNVGQALEKGGIDEPYTIFVPSNEALS-NMT 574
Query: 90 PEFKRFLLEPGNVKSLQTLLMFHIL 114
+LL P + L L+ +HI+
Sbjct: 575 AGVLDYLLSPEGSRKLLELVRYHIV 599
Score = 35.8 bits (81), Expect = 0.45, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 51 ELAELVEKALLLQTLEEAV------GRHNITIFAPKNEALERELDPEFKRFLLEPGNVKS 104
EL+ L E A+ Q + A N+T+ P +A+ +++D K F L N+ +
Sbjct: 1008 ELSFLSEAAVFYQWINNASLQSMLSATSNLTVLVPSLQAI-KDMDQNEKSFWLSRNNIPA 1066
Query: 105 LQTLLMFHILPSRIGSRNWPDEKSGSRKH---NTLWNDFVHLSSKSSKRLIGSAEIFRPD 161
L + +H L +G+ D ++ H +L F+ L I A F
Sbjct: 1067 L---IKYHTL---LGTYRVADLQTLPSSHMLATSLQGSFLRLDKADGNITIEGAS-FVDG 1119
Query: 162 DITRPDGVIHGIERLLVPR 180
D +GV+H I ++L+P+
Sbjct: 1120 DNAATNGVVHIINKVLIPQ 1138
>sp|Q6R325|POLG_AEVVR Genome polyprotein OS=Avian encephalomyelitis virus (strain Van
Reokel) PE=3 SV=1
Length = 2134
Score = 36.6 bits (83), Expect = 0.29, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 163 ITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKPAAPVPA 222
IT D GIE L + RS+Q +L+ ++ L V + RL KP AP+
Sbjct: 1083 ITTSDDHSEGIECLKLVRSIQSVIRGEESLKELAGELRAVGTHVLNKLGRLDKPNAPILV 1142
Query: 223 GA-PPILPIYDAMAPGPSLA 241
A P +L +Y G SLA
Sbjct: 1143 RAEPTVLYLYGNRGGGKSLA 1162
>sp|Q6WQ42|POLG_AEVL2 Genome polyprotein OS=Avian encephalomyelitis virus (strain L2Z) PE=3
SV=1
Length = 2134
Score = 36.6 bits (83), Expect = 0.29, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 163 ITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKPAAPVPA 222
IT D GIE L + RS+Q +L+ ++ L V + RL KP AP+
Sbjct: 1083 ITTSDDHSEGIECLKLVRSIQSVIRGEESLKELAGELRAVGTHVLNKLGRLDKPNAPILV 1142
Query: 223 GA-PPILPIYDAMAPGPSLA 241
A P +L +Y G SLA
Sbjct: 1143 RAEPTVLYLYGNRGGGKSLA 1162
>sp|Q9YLS4|POLG_AEVCA Genome polyprotein OS=Avian encephalomyelitis virus (strain Calnek
vaccine) PE=2 SV=1
Length = 2134
Score = 36.6 bits (83), Expect = 0.29, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 163 ITRPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKPAAPVPA 222
IT D GIE L + RS+Q +L+ ++ L V + RL KP AP+
Sbjct: 1083 ITTSDDHSEGIECLKLVRSIQSVIRGEESLKELAGELRAVGTHVLNKLGRLDKPNAPILV 1142
Query: 223 GA-PPILPIYDAMAPGPSLA 241
A P +L +Y G SLA
Sbjct: 1143 RAEPTVLYLYGNRGGGKSLA 1162
>sp|A8XSV3|NBEA_CAEBR Putative neurobeachin homolog OS=Caenorhabditis briggsae GN=sel-2
PE=3 SV=1
Length = 2531
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 107 TLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVH--LSSKSSKRLIGSAEIFRPDDIT 164
T+ + HIL SRI + P ++ S K N DFV L + S + L + + DIT
Sbjct: 1211 TVTVRHILASRIQQPDTPRYETNSAKKNQCIMDFVKEALENFSPEGLENVERLVQDSDIT 1270
Query: 165 RPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKPAAPVP 221
R GV++ R + E+ NR+ ++S + V L+ P++P P
Sbjct: 1271 RIKGVVY--------RDMVEE-NRQAQFLALSVIYLVSVLMVSRYRDILEPPSSPSP 1318
>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2 PE=2
SV=3
Length = 2507
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 11/117 (9%)
Query: 107 TLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVH--LSSKSSKRLIGSAEIFRPDDIT 164
T+ + HIL SRI + P ++ S K N +FV L +S L + + DIT
Sbjct: 1205 TVTVRHILASRIQQPDTPRYETNSTKKNQCIMEFVREALEKRSPDGLENVERLVQDSDIT 1264
Query: 165 RPDGVIHGIERLLVPRSVQEDFNRRRNLRSISAVLPQGAPEVDPRTHRLKKPAAPVP 221
R GV++ R + E+ NR+ ++S + V L+ P++P P
Sbjct: 1265 RIKGVVY--------RDMVEE-NRQAQFLALSVIYLVSVLMVSRYRDILEPPSSPSP 1312
>sp|O42854|YFHH_SCHPO SH3 domain-containing protein C23A1.17 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC23A1.17 PE=1 SV=1
Length = 1611
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 200 PQGAPEVDPRTHRLKKPAAPVPAGAPPILPIYDAMAPGPSLAPAPAPGPGGA 251
P GAP V P+ + P PVP+GAPP+ P PS+A P P P GA
Sbjct: 1117 PSGAPPV-PKPS-VAAPPVPVPSGAPPV--------PKPSVAAPPVPAPSGA 1158
>sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=1 SV=1
Length = 2571
Score = 32.0 bits (71), Expect = 6.2, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 49 YTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTL 108
+T ++E L L+ G T+FAP NEA++ D +L G + LQ L
Sbjct: 520 FTRFETILENCGLPSILD---GPGPFTVFAPSNEAVDSLRDGRLI-YLFTAG-LSKLQEL 574
Query: 109 LMFHILPSRIGSRNWPDEKSGSR-KHNTLWNDFVHLS-SKSSKRLIGSAEI-FRPDDITR 165
+ +HI EK S+ + T+ N + ++ S+ + L+G I R D+
Sbjct: 575 VRYHIY----NHGQLTVEKLISKGRVLTMANQVLTVNISEGGRILLGPGGIPVRRVDVPA 630
Query: 166 PDGVIHGIERLLVPRSV 182
+GVIH +E +L+P ++
Sbjct: 631 ANGVIHMLEGILLPPTI 647
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,200,453
Number of Sequences: 539616
Number of extensions: 7460389
Number of successful extensions: 28979
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 27183
Number of HSP's gapped (non-prelim): 1653
length of query: 345
length of database: 191,569,459
effective HSP length: 118
effective length of query: 227
effective length of database: 127,894,771
effective search space: 29032113017
effective search space used: 29032113017
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)