Query 019153
Match_columns 345
No_of_seqs 265 out of 1206
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 11:43:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019153.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019153hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w7d_A Fasciclin-like protein; 100.0 2E-32 6.9E-37 233.8 5.8 136 36-181 2-137 (137)
2 2vxp_A Transforming growth fac 100.0 1.9E-30 6.5E-35 220.3 15.4 131 37-178 2-132 (132)
3 1nyo_A Immunogenic protein MPT 100.0 3.1E-30 1.1E-34 227.2 9.4 136 32-181 23-163 (163)
4 1o70_A Fasciclin I, FAS I, FCN 99.9 5E-26 1.7E-30 218.2 6.1 215 35-277 4-239 (324)
5 1o70_A Fasciclin I, FAS I, FCN 99.9 4E-23 1.4E-27 198.0 7.1 140 37-182 159-312 (324)
6 2yqk_A Arginine-glutamic acid 13.2 1.4E+02 0.0049 21.3 3.0 25 247-272 4-28 (63)
7 2l1a_A Formin-C, @; fruiting B 12.5 59 0.002 25.6 0.7 19 252-270 36-54 (107)
8 2g49_C Glucagon preproprotein; 9.8 1.2E+02 0.0041 19.1 1.3 14 257-270 15-28 (29)
9 3bqo_B TERF1-interacting nucle 9.6 1.1E+02 0.0039 18.7 1.1 19 291-310 7-25 (26)
10 1t5q_A Gastric inhibitory poly 9.4 1.4E+02 0.0049 18.9 1.6 13 258-270 16-28 (30)
No 1
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.97 E-value=2e-32 Score=233.78 Aligned_cols=136 Identities=26% Similarity=0.419 Sum_probs=125.5
Q ss_pred CCCHHHHHhcCCChHHHHHHHHHhCcHHHHHhhhCCCCeEEEeeCcHHHhhcCCHHHHHHhcCCCCHHHHHHHHhccccC
Q 019153 36 NSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILP 115 (345)
Q Consensus 36 ~~nIv~vl~~d~~fS~F~~lLekagL~~~L~d~v~~g~~TVFAPTNeAF~~~L~~~~~~~Ll~p~n~~~L~~LL~YHIVp 115 (345)
.+||++++..+++||+|.++|+++||.+.|+ +.++||||||+|+||++ ++.+.++.|+++++++.|+++|+|||++
T Consensus 2 ~~~i~~~l~~~~~~s~f~~~l~~agl~~~L~---~~~~~TvFAPtn~Af~~-l~~~~~~~l~~~~~~~~l~~lL~yHvv~ 77 (137)
T 1w7d_A 2 TGDIVETATGAGSFTTLLTAAEAAGLVDTLK---GDGPFTVFAPTDAAFAA-LPEGTVEDLLKPENKEKLTEILTYHVVP 77 (137)
T ss_dssp CSTTGGGGGSCSSSTTTTHHHHHTTTHHHHT---SSSCEEEECCCHHHHTT-STTTHHHHTTSHHHHHHHHHHHHHHEEE
T ss_pred CCCHHHHHHhCCCHHHHHHHHHHcCCHHHHc---CCCCEEEEEECHHHHHH-cCHhHHHHHhCcCCHHHHHHHHHhhEeC
Confidence 4689999999999999999999999999999 67899999999999999 8888888887666789999999999999
Q ss_pred CccccCCCCCCCCCcceecccCCCeEEEEEcCCeEEEeeeEEeecCceEcCCcEEEEeCCccCCCC
Q 019153 116 SRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRS 181 (345)
Q Consensus 116 g~~~s~dL~~~~~~~~~l~TLsG~~L~Vs~~~G~I~VN~A~Vv~~DdI~asNGVIHvID~VLiPps 181 (345)
+++++++|..+. .++|++|+.|.|+..+| ++||+++|+.+| |.++|||||+||+||+|++
T Consensus 78 ~~~~~~~l~~~~----~~~tl~G~~l~v~~~~g-v~vn~a~v~~~d-i~~~NGvIHvID~VL~P~s 137 (137)
T 1w7d_A 78 GEVMSSDLTEGM----TAETVEGGALTVTLEGG-PKVNGVSISQPD-VDASNGVIHVIDGVLMPGA 137 (137)
T ss_dssp SCCCTTTSCSSE----EEECTTSCEEEEECTTS-CEETTEECSBCC-CBCSSSEEEBCSSCCSSCC
T ss_pred cEEcHHHhcCCC----eeeccCCceEEEEecCC-EEEeCcEEEECC-eecCCeEEEEECeeeCCCC
Confidence 999999998764 38899999999999888 999999999998 9999999999999999984
No 2
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.97 E-value=1.9e-30 Score=220.26 Aligned_cols=131 Identities=27% Similarity=0.349 Sum_probs=120.5
Q ss_pred CCHHHHHhcCCChHHHHHHHHHhCcHHHHHhhhCCCCeEEEeeCcHHHhhcCCHHHHHHhcCCCCHHHHHHHHhccccCC
Q 019153 37 SNSVLVALLDSHYTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQTLLMFHILPS 116 (345)
Q Consensus 37 ~nIv~vl~~d~~fS~F~~lLekagL~~~L~d~v~~g~~TVFAPTNeAF~~~L~~~~~~~Ll~p~n~~~L~~LL~YHIVpg 116 (345)
+||++++..+++||+|.++|+++||.+.|+ +.++||||||+|+||++ ++++.++.|+. +++.|+++|+|||+++
T Consensus 2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~---~~~~~TvFAPtn~Af~~-l~~~~~~~l~~--~~~~l~~iL~yHvv~~ 75 (132)
T 2vxp_A 2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLN---REGVYTVFAPTNEAFRA-LPPRERSRLLG--DAKELANILKYHIGDE 75 (132)
T ss_dssp CCHHHHHTTSTTCHHHHHHHHHHTCHHHHH---SSCCEEEEEECHHHHHH-SCHHHHHHHHT--CHHHHHHHHHHSBBSS
T ss_pred ccHHHHHHcCCCHHHHHHHHHHcCcHHHHc---CCCCEEEEeECHHHHHh-hCHHHHHHHhc--CHHHHHHHHHhcCcCc
Confidence 589999999999999999999999999999 77999999999999999 99888888874 7899999999999999
Q ss_pred ccccCCCCCCCCCcceecccCCCeEEEEEcCCeEEEeeeEEeecCceEcCCcEEEEeCCccC
Q 019153 117 RIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLV 178 (345)
Q Consensus 117 ~~~s~dL~~~~~~~~~l~TLsG~~L~Vs~~~G~I~VN~A~Vv~~DdI~asNGVIHvID~VLi 178 (345)
.+++.+|.... .++|++|+.|.|+..++.++||+++|+.+| |.++|||||+||+||+
T Consensus 76 ~~~~~~l~~~~----~~~tl~G~~l~v~~~~~~v~vn~a~v~~~d-i~a~NGvIHvID~VLl 132 (132)
T 2vxp_A 76 ILVSGGIGALV----RLKSLQGDKLEVSLKNNVVSVNKEPVAEPD-IMATNGVVHVITNVLQ 132 (132)
T ss_dssp CCCSTTCSSCE----EEEBTTSSEEEEEEETTEEEESSCBEEEEE-EEETTEEEEEESSCC-
T ss_pred eeehhhccCCc----eEecCCCCEEEEEEeCCEEEEeccEEEEcc-eecCCEEEEEECcEeC
Confidence 99888886543 488999999999998899999999999998 9999999999999985
No 3
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.96 E-value=3.1e-30 Score=227.18 Aligned_cols=136 Identities=21% Similarity=0.319 Sum_probs=124.3
Q ss_pred CCCCCCCHHHHHhcCCChHHHHHHHH-----HhCcHHHHHhhhCCCCeEEEeeCcHHHhhcCCHHHHHHhcCCCCHHHHH
Q 019153 32 QPQINSNSVLVALLDSHYTELAELVE-----KALLLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQ 106 (345)
Q Consensus 32 ~~~~~~nIv~vl~~d~~fS~F~~lLe-----kagL~~~L~d~v~~g~~TVFAPTNeAF~~~L~~~~~~~Ll~p~n~~~L~ 106 (345)
.+...+||+++|..+++||+|.++|+ +++|.+.|+ +.+ ||||||+|+||++ +..+.++.|++ +++.|+
T Consensus 23 ~g~~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~---~~g-~TvFAPtn~AF~~-l~~~~~~~L~~--~~~~L~ 95 (163)
T 1nyo_A 23 QGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN---SGQ-YTVFAPTNAAFSK-LPASTIDELKT--NSSLLT 95 (163)
T ss_dssp THHHHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHT---SSS-EEECCBCHHHHHH-SCHHHHHHHTT--CSSHHH
T ss_pred CCCCCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhC---CCC-cEEEEECHHHHHh-ccHHHHHHHhc--CHHHHH
Confidence 34577899999999999999999999 999999999 667 9999999999999 88888888874 567899
Q ss_pred HHHhccccCCccccCCCCCCCCCcceecccCCCeEEEEEcCCeEEEeeeEEeecCceEcCCcEEEEeCCccCCCC
Q 019153 107 TLLMFHILPSRIGSRNWPDEKSGSRKHNTLWNDFVHLSSKSSKRLIGSAEIFRPDDITRPDGVIHGIERLLVPRS 181 (345)
Q Consensus 107 ~LL~YHIVpg~~~s~dL~~~~~~~~~l~TLsG~~L~Vs~~~G~I~VN~A~Vv~~DdI~asNGVIHvID~VLiPps 181 (345)
++|+|||++++++.++|. + .++|++|+.|+|+..++.++||+++|+.+| |.++|||||+||+||+|++
T Consensus 96 ~iL~yHvv~g~~~~~~l~-g-----~~~Tl~G~~l~v~~~~~~v~vn~a~V~~~d-i~a~NGvIHvID~VL~P~~ 163 (163)
T 1nyo_A 96 SILTYHVVAGQTSPANVV-G-----TRQTLQGASVTVTGQGNSLKVGNADVVCGG-VSTANATVYMIDSVLMPPA 163 (163)
T ss_dssp HHHHHTEEESCCCTTTSC-E-----EEECTTSSEEEEEECSSCEEETTEECSSBC-CCCSSEEEBCBSSCCCCCC
T ss_pred HHHHhceECCEEcHHHhC-C-----ccccCCCCEEEEEEECCEEEEeccEEEECc-eEcCCEEEEEECcEeCCCC
Confidence 999999999999999997 2 389999999999998889999999999998 9999999999999999974
No 4
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.92 E-value=5e-26 Score=218.16 Aligned_cols=215 Identities=13% Similarity=0.167 Sum_probs=145.5
Q ss_pred CCCCHHHHHh------cCCChHHHHHHHHHhC--cHHHHHhhhCCCCeEEEeeCcHHHhhcCCHHHHHHhcCCCCHHHHH
Q 019153 35 INSNSVLVAL------LDSHYTELAELVEKAL--LLQTLEEAVGRHNITIFAPKNEALERELDPEFKRFLLEPGNVKSLQ 106 (345)
Q Consensus 35 ~~~nIv~vl~------~d~~fS~F~~lLekag--L~~~L~d~v~~g~~TVFAPTNeAF~~~L~~~~~~~Ll~p~n~~~L~ 106 (345)
...||+++|. .+++||+|.++|+++| |.++|+ +.++||||||+|+||++ +. .+.|+ .+++.|+
T Consensus 4 ~~~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~---~~~~~TvFAPtn~Af~~-~~---~~~l~--~~~~~l~ 74 (324)
T 1o70_A 4 ADTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDIN---SLTEVTILAPSNEAWNS-SN---INNVL--RDRNKMR 74 (324)
T ss_dssp ---------------CCHHHHHHHHHHHHHTCSHHHHHHH---TCSSEEEEEECHHHHHH-TC---THHHH--TCHHHHH
T ss_pred ehhhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHc---CCCCeEEEEEChHhhhc-cc---Hhhhh--CCHHHHH
Confidence 3567888887 6789999999999999 999999 78999999999999998 43 23333 2788999
Q ss_pred HHHhccccCCccccCCCCCCCC-CcceecccCCCe-EEEEEc----CCeEEEee----eEEeecCceEcCCcEEEEeCCc
Q 019153 107 TLLMFHILPSRIGSRNWPDEKS-GSRKHNTLWNDF-VHLSSK----SSKRLIGS----AEIFRPDDITRPDGVIHGIERL 176 (345)
Q Consensus 107 ~LL~YHIVpg~~~s~dL~~~~~-~~~~l~TLsG~~-L~Vs~~----~G~I~VN~----A~Vv~~DdI~asNGVIHvID~V 176 (345)
++|+|||++++++.++|..... +...++|+.|+. +.++.. ++.+++|+ ++|+.+| |.++|||||+||+|
T Consensus 75 ~iL~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~d-i~~~NGvIhvID~V 153 (324)
T 1o70_A 75 QILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQAD-VAQTNGYVHIIDHV 153 (324)
T ss_dssp HHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEE-EECSSEEEEEESSC
T ss_pred HHHHhcEeCCeecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEecc-ccccCcEEEEEchh
Confidence 9999999999999988876541 112488999886 666653 24688884 9999998 99999999999999
Q ss_pred cCCCC--chHHHhhcccccccc-ccCCCCCCCCCcccccccCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCCCC
Q 019153 177 LVPRS--VQEDFNRRRNLRSIS-AVLPQGAPEVDPRTHRLKKPAAPVPAGAPPILPIYDAMAPGPSLAPAPAPGPGGAHR 253 (345)
Q Consensus 177 LiPps--v~~~f~~~r~L~si~-av~P~gap~~d~~~~~l~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~ 253 (345)
|+|+. +.+.+.....+..+. ++.-.+ ....|....-+++. |+|+.+||+-.+.--| ++ -..
T Consensus 154 L~pp~~ti~~~l~~~~~fs~~~~~l~~~g------l~~~L~~~~~~~Tv----FAPtd~Af~~l~~~~~---~~---~~~ 217 (324)
T 1o70_A 154 LGVPYTTVLGKLESDPMMSDTYKMGKFSH------FNDQLNNTQRRFTY----FVPRDKGWQKTELDYP---SA---HKK 217 (324)
T ss_dssp TTSCCSCHHHHHHHCGGGHHHHHHTTTTT------TTGGGGCSSSEEEE----EEECHHHHHHHHHHCH---HH---HHH
T ss_pred hhhchhhHHHHhhcCchHHHHHHHHHhhC------HHHHhCCCCCCeEE----EEeChHHHHhhhhhch---hH---HHH
Confidence 99975 556555444443332 232222 23455532334677 9999999965431000 00 001
Q ss_pred CCCChhhHHHHHHHHHhhcccCCC
Q 019153 254 HFNGERQVKDFIHTLLHYGQRNGG 277 (345)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~ 277 (345)
.+. .+.++.++.||.||++.|+
T Consensus 218 ~l~--~~~~~~l~~iL~yHvv~~~ 239 (324)
T 1o70_A 218 LFM--ADFSYHSKSILERHLAISD 239 (324)
T ss_dssp HTS--GGGHHHHHHHHHTTEEEES
T ss_pred Hhc--cCcHHHHHHHHHhcEeCCc
Confidence 111 1234689999999999883
No 5
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.87 E-value=4e-23 Score=197.96 Aligned_cols=140 Identities=16% Similarity=0.262 Sum_probs=114.1
Q ss_pred CCHHHHHhcCCChHHHHHHHHHhCcHHHHHhhhCCCCeEEEeeCcHHHhhcCC----HHHHHHhcCCCCHHHHHHHHhcc
Q 019153 37 SNSVLVALLDSHYTELAELVEKALLLQTLEEAVGRHNITIFAPKNEALERELD----PEFKRFLLEPGNVKSLQTLLMFH 112 (345)
Q Consensus 37 ~nIv~vl~~d~~fS~F~~lLekagL~~~L~d~v~~g~~TVFAPTNeAF~~~L~----~~~~~~Ll~p~n~~~L~~LL~YH 112 (345)
.|+.+.+..+++||+|.+++++++|.++|++ ..++||||||+|+||++ +. .+..+.|+ ++..+.|+++|+||
T Consensus 159 ~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~--~~~~~TvFAPtd~Af~~-l~~~~~~~~~~~l~-~~~~~~l~~iL~yH 234 (324)
T 1o70_A 159 TTVLGKLESDPMMSDTYKMGKFSHFNDQLNN--TQRRFTYFVPRDKGWQK-TELDYPSAHKKLFM-ADFSYHSKSILERH 234 (324)
T ss_dssp SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGC--SSSEEEEEEECHHHHHH-HHHHCHHHHHHHTS-GGGHHHHHHHHHTT
T ss_pred hhHHHHhhcCchHHHHHHHHHhhCHHHHhCC--CCCCeEEEEeChHHHHh-hhhhchhHHHHHhc-cCcHHHHHHHHHhc
Confidence 5799999999999999999999999999983 36899999999999999 63 33344443 23345899999999
Q ss_pred ccCC--ccccCCCCCCC--CCcceecccCCCeEEEEE--cCCeEEEe----eeEEeecCceEcCCcEEEEeCCccCCCCc
Q 019153 113 ILPS--RIGSRNWPDEK--SGSRKHNTLWNDFVHLSS--KSSKRLIG----SAEIFRPDDITRPDGVIHGIERLLVPRSV 182 (345)
Q Consensus 113 IVpg--~~~s~dL~~~~--~~~~~l~TLsG~~L~Vs~--~~G~I~VN----~A~Vv~~DdI~asNGVIHvID~VLiPpsv 182 (345)
|+++ .++.++|.+.. .+...++|++ +.+.|+. .++.++|| +++|+.+| |.++|||||+||+||+|++.
T Consensus 235 vv~~~~~~~~~~l~~~~~~~~~~~~~Tl~-~~l~v~~~~~~~~v~v~~~~~~a~v~~~d-i~~~NGvIHvID~VL~P~~~ 312 (324)
T 1o70_A 235 LAISDKEYTMKDLVKFSQESGSVILPTFR-DSLSIRVEEEAGRYVIIWNYKKINVYRPD-VECTNGIIHVIDYPLLEEKD 312 (324)
T ss_dssp EEEESSCCCHHHHHHHHHHSSSEEEECSS-SEEEEEEEEETTEEEEEETTEEEEEEEEE-EEETTEEEEEESSCSCCTTT
T ss_pred EeCCcceEcHHHHhhhccCCCeeeeeccC-CcEEEEEEecCCEEEEEecCceeEEEEcc-cccCCCeEEEeceeecCCcc
Confidence 9998 77767886432 1123478998 8888876 57889997 89999998 99999999999999999965
No 6
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=13.20 E-value=1.4e+02 Score=21.29 Aligned_cols=25 Identities=36% Similarity=0.765 Sum_probs=18.8
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHhhc
Q 019153 247 GPGGAHRHFNGERQVKDFIHTLLHYG 272 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (345)
+|......|. ++|.+-|.+.|..||
T Consensus 4 ~p~~~~~~WT-~eE~~~Fe~~l~~yG 28 (63)
T 2yqk_A 4 GSSGIEKCWT-EDEVKRFVKGLRQYG 28 (63)
T ss_dssp CCCCCCCSCC-HHHHHHHHHHHHHTC
T ss_pred CCCcCCCCcC-HHHHHHHHHHHHHhC
Confidence 3444556775 456899999999999
No 7
>2l1a_A Formin-C, @; fruiting BODY formation, actin binding protein; NMR {Dictyostelium discoideum}
Probab=12.54 E-value=59 Score=25.62 Aligned_cols=19 Identities=47% Similarity=0.714 Sum_probs=17.0
Q ss_pred CCCCCChhhHHHHHHHHHh
Q 019153 252 HRHFNGERQVKDFIHTLLH 270 (345)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~ 270 (345)
.|-||||-.|||-|.-||.
T Consensus 36 shifdg~tavkdhikvllt 54 (107)
T 2l1a_A 36 SHIFDGETAVKDHIKVLLT 54 (107)
T ss_dssp EEEECSSSBHHHHHHHHHH
T ss_pred eeeeccchHHHHHHHHHHH
Confidence 3789999999999999885
No 8
>2g49_C Glucagon preproprotein; protein-peptide complex, hydrolase; 2.50A {Homo sapiens} PDB: 1kx6_A 1gcn_A 1bh0_A 1nau_A
Probab=9.77 E-value=1.2e+02 Score=19.09 Aligned_cols=14 Identities=29% Similarity=0.681 Sum_probs=10.6
Q ss_pred ChhhHHHHHHHHHh
Q 019153 257 GERQVKDFIHTLLH 270 (345)
Q Consensus 257 ~~~~~~~~~~~~~~ 270 (345)
+....||||+.|++
T Consensus 15 ~~~aak~fv~wL~~ 28 (29)
T 2g49_C 15 DSRRAQDFVQWLMN 28 (29)
T ss_pred HHHHHHHHHHHHhc
Confidence 34568999998875
No 9
>3bqo_B TERF1-interacting nuclear factor 2; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens}
Probab=9.56 E-value=1.1e+02 Score=18.72 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=15.1
Q ss_pred CccccccccCCCCCccCCCC
Q 019153 291 PFGVRGIRADGAGPERRGDG 310 (345)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~ 310 (345)
|+|-|-|+...+.+ |.||-
T Consensus 7 PLGrR~i~s~wasa-~~ghK 25 (26)
T 3bqo_B 7 PLGRRRVQSQWAST-RXXXX 25 (26)
T ss_pred cccccccccccccc-ccccC
Confidence 68889898888877 66764
No 10
>1t5q_A Gastric inhibitory polypeptide; GIP, molecular modelling, helix, diabetes, obesity, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=9.39 E-value=1.4e+02 Score=18.85 Aligned_cols=13 Identities=31% Similarity=0.506 Sum_probs=10.1
Q ss_pred hhhHHHHHHHHHh
Q 019153 258 ERQVKDFIHTLLH 270 (345)
Q Consensus 258 ~~~~~~~~~~~~~ 270 (345)
....||||+-|++
T Consensus 16 ~~~ak~fv~wLl~ 28 (30)
T 1t5q_A 16 KIHQQDFVNWLLA 28 (30)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 3468999998875
Done!