BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019155
(345 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/257 (68%), Positives = 203/257 (78%), Gaps = 9/257 (3%)
Query: 92 RAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMD-TVTDQFPDQVLVHFF 150
R++ + VP +GV S+CG+RPEMED+V+ IP FLQ+ + L+D VT+ F + HFF
Sbjct: 3 RSLFEFKCVPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFF 62
Query: 151 GVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIG 210
GVYDGHGG QVANYC ERMHLAL EE+V K DG +WQE+WKKA NSF++VDSEI
Sbjct: 63 GVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEI- 121
Query: 211 GALGGEPVA--PETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPVPLSVDHKPDRED 268
E VA PET GST+VVA++ PT I VANCGDSRAVLCRGK P+ LSVDHKPDR+D
Sbjct: 122 -----ETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDD 176
Query: 269 ELARIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPDPDVMFVPRAKEDDCLILA 328
E ARIEAAGGKVI+WNG+RVFGVLAMSRSIGDRYLKP +IPDP+V V R KEDDCLILA
Sbjct: 177 EAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILA 236
Query: 329 SDGLWDVMNNEEACDVA 345
SDGLWDVM NEE CD+A
Sbjct: 237 SDGLWDVMTNEEVCDLA 253
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/254 (68%), Positives = 200/254 (78%), Gaps = 9/254 (3%)
Query: 92 RAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFG 151
R++ + VP +G S+CG+RPEMEDAV+ IP FLQ + ++D +F Q HFFG
Sbjct: 3 RSLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDG---RFDPQSAAHFFG 59
Query: 152 VYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGG 211
VYDGHGG QVANYC ERMHLALAEE+ K L DG +W E+WKKA NSFL+VDSEI
Sbjct: 60 VYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI-- 117
Query: 212 ALGGEPVAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPVPLSVDHKPDREDELA 271
E VAPET GST+VVA++ P+ I VANCGDSRAVLCRGK +PLSVDHKPDREDE A
Sbjct: 118 ----ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAA 173
Query: 272 RIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPDPDVMFVPRAKEDDCLILASDG 331
RIEAAGGKVIQWNG+RVFGVLAMSRSIGDRYLKP IIPDP+V V R KEDDCLILASDG
Sbjct: 174 RIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDG 233
Query: 332 LWDVMNNEEACDVA 345
+WDVM +EEAC++A
Sbjct: 234 VWDVMTDEEACEMA 247
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/253 (68%), Positives = 199/253 (78%), Gaps = 9/253 (3%)
Query: 93 AVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGV 152
++ + VP +G S+CG+RPEMEDAV+ IP FLQ + ++D +F Q HFFGV
Sbjct: 1 SLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLD---GRFDPQSAAHFFGV 57
Query: 153 YDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGA 212
YDGHGG QVANYC ERMHLALAEE+ K L DG +W E+WKKA NSFL+VDSEI
Sbjct: 58 YDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEI--- 114
Query: 213 LGGEPVAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPVPLSVDHKPDREDELAR 272
E VAPET GST+VVA++ P+ I VANCGDSRAVLCRGK +PLSVDHKPDREDE AR
Sbjct: 115 ---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAAR 171
Query: 273 IEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPDPDVMFVPRAKEDDCLILASDGL 332
IEAAGGKVIQWNG+RVFGVLAMSRSIGDRYLKP IIPDP+V V R KEDDCLILASDG+
Sbjct: 172 IEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGV 231
Query: 333 WDVMNNEEACDVA 345
WDVM +EEAC++A
Sbjct: 232 WDVMTDEEACEMA 244
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 355 bits (910), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/247 (70%), Positives = 196/247 (79%), Gaps = 9/247 (3%)
Query: 99 QVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGG 158
VP +G S+CG+RPEMEDAV+ IP FLQ + ++D +F Q HFFGVYDGHGG
Sbjct: 22 SVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDG---RFDPQSAAHFFGVYDGHGG 78
Query: 159 CQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGEPV 218
QVANYC ERMHLALAEE+ K L DG +W E+WKKA NSFL+VDSEI E V
Sbjct: 79 SQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI------ESV 132
Query: 219 APETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPVPLSVDHKPDREDELARIEAAGG 278
APET GST+VVA++ P+ I VANCGDSRAVLCRGK +PLSVDHKPDREDE ARIEAAGG
Sbjct: 133 APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGG 192
Query: 279 KVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPDPDVMFVPRAKEDDCLILASDGLWDVMNN 338
KVIQWNG+RVFGVLAMSRSIGDRYLKP IIPDP+V V R KEDDCLILASDG+WDVM +
Sbjct: 193 KVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTD 252
Query: 339 EEACDVA 345
EEAC++A
Sbjct: 253 EEACEMA 259
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/275 (58%), Positives = 193/275 (70%), Gaps = 15/275 (5%)
Query: 86 QHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPD-- 143
H R+V +LD +P WG S+ G R EMEDA AV P FL++ +LM P
Sbjct: 2 NHLVKGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLT 61
Query: 144 QVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQD---GGSWQEQWKKAFAN 200
+ HFFGVYDGHGG +VA+YC +R+H ALAEE+ K L G Q QW K F +
Sbjct: 62 HLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTS 121
Query: 201 SFLKVDSEIGGALGG----------EPVAPETAGSTAVVAIISPTLIIVANCGDSRAVLC 250
FL VD EI G +G E VA ET GSTAVVA++ + I+V+NCGDSRAVL
Sbjct: 122 CFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 181
Query: 251 RGKVPVPLSVDHKPDREDELARIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPD 310
RGK +PLSVDHKPDREDE ARIE AGGKVIQW G+RVFGVLAMSRSIGDRYLKP++IP+
Sbjct: 182 RGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPE 241
Query: 311 PDVMFVPRAKEDDCLILASDGLWDVMNNEEACDVA 345
P+V F+PR++ED+CLILASDGLWDVMNN+E C++A
Sbjct: 242 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 276
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/275 (58%), Positives = 193/275 (70%), Gaps = 15/275 (5%)
Query: 86 QHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPD-- 143
H R+V +LD +P WG S+ G R EMEDA AV P FL++ +LM P
Sbjct: 5 NHLVKGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLT 64
Query: 144 QVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARL---QDGGSWQEQWKKAFAN 200
+ HFFGVYDGHGG +VA+YC +R+H ALAEE+ K L G Q QW K F +
Sbjct: 65 HLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTS 124
Query: 201 SFLKVDSEIGGALGG----------EPVAPETAGSTAVVAIISPTLIIVANCGDSRAVLC 250
FL VD EI G +G E VA ET GSTAVVA++ + I+V+NCGDSRAVL
Sbjct: 125 CFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 184
Query: 251 RGKVPVPLSVDHKPDREDELARIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPD 310
RGK +PLSVDHKPDREDE ARIE AGGKVIQW G+RVFGVLAMSRSIGDRYLKP++IP+
Sbjct: 185 RGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPE 244
Query: 311 PDVMFVPRAKEDDCLILASDGLWDVMNNEEACDVA 345
P+V F+PR++ED+CLILASDGLWDVMNN+E C++A
Sbjct: 245 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 279
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 315 bits (807), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/275 (58%), Positives = 193/275 (70%), Gaps = 15/275 (5%)
Query: 86 QHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPD-- 143
H R+V +LD +P WG S+ G R EMEDA AV P FL++ +LM P
Sbjct: 3 NHLVKGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLT 62
Query: 144 QVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARL---QDGGSWQEQWKKAFAN 200
+ HFFGVYDGHGG +VA+YC +R+H ALAEE+ K L G Q QW K F +
Sbjct: 63 HLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTS 122
Query: 201 SFLKVDSEIGGALGG----------EPVAPETAGSTAVVAIISPTLIIVANCGDSRAVLC 250
FL VD EI G +G E VA ET GSTAVVA++ + I+V+NCGDSRAVL
Sbjct: 123 CFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 182
Query: 251 RGKVPVPLSVDHKPDREDELARIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPD 310
RGK +PLSVDHKPDREDE ARIE AGGKVIQW G+RVFGVLAMSRSIGDRYLKP++IP+
Sbjct: 183 RGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPE 242
Query: 311 PDVMFVPRAKEDDCLILASDGLWDVMNNEEACDVA 345
P+V F+PR++ED+CLILASDGLWDVMNN+E C++A
Sbjct: 243 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 277
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/275 (58%), Positives = 193/275 (70%), Gaps = 15/275 (5%)
Query: 86 QHEETKRAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPD-- 143
H R+V +LD +P WG S+ G R EMEDA AV P FL++ +LM P
Sbjct: 12 NHLVKGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLT 71
Query: 144 QVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARL---QDGGSWQEQWKKAFAN 200
+ HFFGVYDGHGG +VA+YC +R+H ALAEE+ K L G Q QW K F +
Sbjct: 72 HLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTS 131
Query: 201 SFLKVDSEIGGALGG----------EPVAPETAGSTAVVAIISPTLIIVANCGDSRAVLC 250
FL VD EI G +G E VA ET GSTAVVA++ + I+V+NCGDSRAVL
Sbjct: 132 CFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 191
Query: 251 RGKVPVPLSVDHKPDREDELARIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPD 310
RGK +PLSVDHKPDREDE ARIE AGGKVIQW G+RVFGVLAMSRSIGDRYLKP++IP+
Sbjct: 192 RGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPE 251
Query: 311 PDVMFVPRAKEDDCLILASDGLWDVMNNEEACDVA 345
P+V F+PR++ED+CLILASDGLWDVMNN+E C++A
Sbjct: 252 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 286
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/269 (59%), Positives = 192/269 (71%), Gaps = 15/269 (5%)
Query: 92 RAVIQLDQVPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPD--QVLVHF 149
R+V +LD +P WG S+ G R EMEDA AV P FL++ +LM P + HF
Sbjct: 5 RSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHF 64
Query: 150 FGVYDGHGGCQVANYCCERMHLALAEELVTAKARL---QDGGSWQEQWKKAFANSFLKVD 206
FGVYDGHGG +VA+YC +R+H ALAEE+ K L G Q QW K F + FL VD
Sbjct: 65 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 124
Query: 207 SEIGGALGG----------EPVAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPV 256
EI G +G E VA ET GSTAVVA++ + I+V+NCGDSRAVL RGK +
Sbjct: 125 GEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAM 184
Query: 257 PLSVDHKPDREDELARIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPDPDVMFV 316
PLSVDHKPDREDE ARIE AGGKVIQW G+RVFGVLAMSRSIGDRYLKP++IP+P+V F+
Sbjct: 185 PLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFM 244
Query: 317 PRAKEDDCLILASDGLWDVMNNEEACDVA 345
PR++ED+CLILASDGLWDVMNN+E C++A
Sbjct: 245 PRSREDECLILASDGLWDVMNNQEVCEIA 273
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 306 bits (785), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 155/261 (59%), Positives = 186/261 (71%), Gaps = 15/261 (5%)
Query: 100 VPRWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPD--QVLVHFFGVYDGHG 157
+P WG S+ G R EMEDA AV P FL++ +LM P + HFFGVYDGHG
Sbjct: 2 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG 61
Query: 158 GCQVANYCCERMHLALAEELVTAKARL---QDGGSWQEQWKKAFANSFLKVDSEIGGALG 214
G +VA+YC +R+H ALAEE+ K L G Q QW K F + FL VD EI G +G
Sbjct: 62 GHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIG 121
Query: 215 G----------EPVAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPVPLSVDHKP 264
E VA ET GSTAVVA++ + I+V+NCGDSRAVL RGK +PLSVDHKP
Sbjct: 122 RAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKP 181
Query: 265 DREDELARIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLKPWIIPDPDVMFVPRAKEDDC 324
DREDE ARIE AGGKVIQW G+RVFGVLAMSRSIGDRYLKP++IP+P+V F+PR++ED+C
Sbjct: 182 DREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC 241
Query: 325 LILASDGLWDVMNNEEACDVA 345
LILASDGLWDVMNN+E C++A
Sbjct: 242 LILASDGLWDVMNNQEVCEIA 262
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 131/257 (50%), Gaps = 42/257 (16%)
Query: 102 RWGVNSVCGKRPEMEDA---VAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGG 158
R+G++S+ G R EMEDA V +P+ L+ + FF VYDGH G
Sbjct: 23 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWS------------------FFAVYDGHAG 64
Query: 159 CQVANYCCERM--HLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGE 216
QVA YCCE + H+ ++ + G E K FL++D + + +
Sbjct: 65 SQVAKYCCEHLLDHITNNQDFKGSA-----GAPSVENVKNGIRTGFLEIDEHMR-VMSEK 118
Query: 217 PVAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPVPLSVDHKPDREDELARIEAA 276
+ +GSTAV +ISP NCGDSR +LCR + + DHKP E RI+ A
Sbjct: 119 KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 178
Query: 277 GGKVIQWNGSRVFGVLAMSRSIGDRYLK---------PWIIPDPDVMFVPRAKEDD-CLI 326
GG V+ RV G LA+SR++GD K + P+P+V + R++EDD +I
Sbjct: 179 GGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII 235
Query: 327 LASDGLWDVMNNEEACD 343
LA DG+WDVM NEE CD
Sbjct: 236 LACDGIWDVMGNEELCD 252
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 131/257 (50%), Gaps = 42/257 (16%)
Query: 102 RWGVNSVCGKRPEMEDA---VAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGG 158
R+G++S+ G R EMEDA V +P+ L+ + FF VYDGH G
Sbjct: 23 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWS------------------FFAVYDGHAG 64
Query: 159 CQVANYCCERM--HLALAEELVTAKARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGE 216
QVA YCCE + H+ ++ + G E K FL++D + + +
Sbjct: 65 SQVAKYCCEHLLDHITNNQDFKGSA-----GAPSVENVKNGIRTGFLEIDEHMR-VMSEK 118
Query: 217 PVAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPVPLSVDHKPDREDELARIEAA 276
+ +GSTAV +ISP NCGDSR +LCR + + DHKP E RI+ A
Sbjct: 119 KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 178
Query: 277 GGKVIQWNGSRVFGVLAMSRSIGDRYLK---------PWIIPDPDVMFVPRAKEDD-CLI 326
GG V+ RV G LA+SR++GD K + P+P+V + R++EDD +I
Sbjct: 179 GGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII 235
Query: 327 LASDGLWDVMNNEEACD 343
LA DG+WDVM NEE CD
Sbjct: 236 LACDGIWDVMGNEELCD 252
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 130/256 (50%), Gaps = 36/256 (14%)
Query: 102 RWGVNSVCGKRPEMEDAVAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQV 161
R+G++S+ G R EMEDA + H L D FF VYDGH G +V
Sbjct: 25 RYGLSSMQGWRVEMEDAHTAVVGI----PHGLEDW-----------SFFAVYDGHAGSRV 69
Query: 162 ANYCCERM--HLALAEELVTAKARLQDGGSWQ---EQWKKAFANSFLKVDSEIGGALGGE 216
ANYC + H+ E+ +A + G + + E K FLK+D E
Sbjct: 70 ANYCSTHLLEHITTNEDF---RAAGKSGSALELSVENVKNGIRTGFLKID-EYMRNFSDL 125
Query: 217 PVAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVPVPLSVDHKPDREDELARIEAA 276
+ +GSTAV +ISP I NCGDSRAVL R + DHKP E RI+ A
Sbjct: 126 RNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNA 185
Query: 277 GGKVIQWNGSRVFGVLAMSRSIGDRYLK---------PWIIPDPDVMFVPRAKEDDCLIL 327
GG V+ RV G LA+SR++GD K + P+P+V + RA+ED+ +IL
Sbjct: 186 GGSVMI---QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIIL 242
Query: 328 ASDGLWDVMNNEEACD 343
A DG+WDVM+NEE C+
Sbjct: 243 AXDGIWDVMSNEELCE 258
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 112/223 (50%), Gaps = 36/223 (16%)
Query: 140 QFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFA 199
F DQ FF VYDGHGG +VA YC +HL + V A R ++++KA
Sbjct: 46 NFDDQC--SFFAVYDGHGGAEVAQYC--SLHLPTFLKTVEAYGR--------KEFEKALK 93
Query: 200 NSFLKVDSEI-------------GGALGGEPVAPETAGSTAVVAIISPTLIIVANCGDSR 246
+FL D+ + G + G + + +G TAVVA++ + VAN GDSR
Sbjct: 94 EAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSR 153
Query: 247 AVLCRGKVPVPLSVDHKPDREDELARIEAAGGKVIQWNGSRVFGVLAMSRSIGDRYLK-- 304
V+CR + +S DHKP+ E RIE AGG+V RV G L +SR+IGD K
Sbjct: 154 CVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTL--DGRVNGGLNLSRAIGDHGYKMN 211
Query: 305 -------PWIIPDPDVMFVPRAKEDDCLILASDGLWDVMNNEE 340
I PD+ + ED+ ++LA DG+W+ M +E+
Sbjct: 212 KSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQ 254
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 155/352 (44%), Gaps = 69/352 (19%)
Query: 29 VNPDSKEEDSMSLVDSSGPDEFLTAVNRRSVADDVELEIFAERGKKESD----------- 77
V P+ K E ++L S G E + + + + +E FA+R KE D
Sbjct: 21 VKPEVKPETHINLKVSDGSSEIFFKIKKTTPLRRL-MEAFAKRQGKEMDSLRFLYDGIRI 79
Query: 78 -----------ESNPMIPEQHEETKRAVIQLDQ---VPRW-----GVNSVCGKRPEMEDA 118
E N +I E+ + +P+ G S GKR E ED
Sbjct: 80 QADQAPEDLDMEDNDIIEAHREQIGGENLYFQAGKPIPKISLENVGCASQIGKRKENEDR 139
Query: 119 VAVIPAFLQIQTHVLMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELV 178
Q D+VL +F VYDGHGG A++C M + + L
Sbjct: 140 FDFA-----------------QLTDEVL--YFAVYDGHGGPAAADFCHTHMEKCIMDLLP 180
Query: 179 TAKARLQDGGSWQEQWKKAFANSFLKVDSEIGG-ALGGEPVAPETAGSTAVVAIISPTL- 236
K + +FL++D A T+G+TA VA++ +
Sbjct: 181 KEK-----------NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIE 229
Query: 237 IIVANCGDSRAVLCRGKVPVPLSVDHKPDREDELARIEAAGGKVIQWNG---SRVFGVLA 293
++VA+ GDSRA+LCR P+ L++DH P+R+DE RI+ GG + WN V G LA
Sbjct: 230 LVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHVNGRLA 288
Query: 294 MSRSIGDRYLK-PWIIPDPDVMFVPRAKEDDC-LILASDGLWDVMNNEEACD 343
M+RSIGD LK +I +P+ + DD L+L +DG+ ++N++E CD
Sbjct: 289 MTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICD 340
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 21/211 (9%)
Query: 140 QFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFA 199
Q D+VL +F VYDGHGG A++C M + + L K +
Sbjct: 30 QLTDEVL--YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEK-----------NLETLLT 76
Query: 200 NSFLKVDSEIGG-ALGGEPVAPETAGSTAVVAIISPTL-IIVANCGDSRAVLCRGKVPVP 257
+FL++D A T+G+TA VA++ + ++VA+ GDSRA+LCR P+
Sbjct: 77 LAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMK 136
Query: 258 LSVDHKPDREDELARIEAAGGKVIQWNG---SRVFGVLAMSRSIGDRYLK-PWIIPDPDV 313
L++DH P+R+DE RI+ GG + WN V G LAM+RSIGD LK +I +P+
Sbjct: 137 LTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPET 195
Query: 314 MFVPRAKEDDC-LILASDGLWDVMNNEEACD 343
+ DD L+L +DG+ ++N++E CD
Sbjct: 196 KRIKLHHADDSFLVLTTDGINFMVNSQEICD 226
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 62/243 (25%)
Query: 149 FFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWK------------- 195
FFGV+DG V ++ E + + +L+++ A WQE +
Sbjct: 55 FFGVFDG----TVGDFASENVKDLVVPQLISSPA-------WQEVTEXLRSDVPATEVDE 103
Query: 196 -------KAFANSFLKVDSEIGGALGGEPVAPETAGSTAVVAIISPTLIIVANCGDSRAV 248
+A + + D+E+ E + + A ST+V A+++ + V + GDSR
Sbjct: 104 KLPQLLDQAVDDXYKNADNELVKXC--EQLNKDYASSTSVTAVLAKGFVAVGHLGDSR-- 159
Query: 249 LCRGKVPVP-------LSVDHKPDREDELARIEAAGGKV--IQWNGSRVF---------- 289
+ G V P L+VDHKPD E RI GG V + + ++ F
Sbjct: 160 IAXG-VETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRK 218
Query: 290 ------GVLAMSRSIGDRYLKPWIIPD-PDVMFVPRAKEDDCLILASDGLWDVMNNEEAC 342
L SR+ G + LK + + + PDV V + ILA+DGLWDV + +A
Sbjct: 219 SRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAV 278
Query: 343 DVA 345
++A
Sbjct: 279 EIA 281
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 113/296 (38%), Gaps = 102/296 (34%)
Query: 149 FFGVYDGHGGCQVANYCCERMHLALA------EELVTAKARLQDGGS------------- 189
GV+DGH GC + ER+ +A E L+ + ++ G +
Sbjct: 68 LLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPND 127
Query: 190 -----------------WQE------------QWKKAFANSFLKVDSEIG-GALGGEP-- 217
WQE K+A N+F ++D++I A G+P
Sbjct: 128 YFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNS 187
Query: 218 ------VAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGK-----VPVPLSVDHKPDR 266
+ +G+TA VA + + VAN GDSRA+L + V LS DH
Sbjct: 188 FLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQN 247
Query: 267 EDELARIEAAGGK-----VIQWNGSRVFGVLAMSRSIGDRYLK----------------- 304
E EL R++ K V++ + R+ G+L R+ GD K
Sbjct: 248 ERELQRLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQL 305
Query: 305 ----------------PWIIPDPDVMFVPRAKEDDCLILASDGLWDVMNNEEACDV 344
P++ +P+V + +D L+LA+DGLW+ M+ ++ +
Sbjct: 306 NDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRI 361
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 102/296 (34%)
Query: 149 FFGVYDGHGGCQVANYCCERMHLALA------EELVTAKARLQDGGS------------- 189
GV+DGH GC + ER+ +A E L+ + ++ G +
Sbjct: 68 LLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPND 127
Query: 190 -----------------WQE------------QWKKAFANSFLKVDSEIG-GALGGEP-- 217
WQE K+A N+F ++D++I A G+P
Sbjct: 128 YFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNS 187
Query: 218 ------VAPETAGSTAVVAIISPTLIIVANCGDSRAVLCRGK-----VPVPLSVDHKPDR 266
+ +G+TA VA + + VAN GDSRA+L + V LS DH
Sbjct: 188 FLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQN 247
Query: 267 EDELARIEAAGGK-----VIQWNGSRVFGVLAMSRSIGD--------------------- 300
E E+ R++ K V++ + R+ G+L R+ GD
Sbjct: 248 EREVERLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQL 305
Query: 301 ------------RYLKPWIIPDPDVMFVPRAKEDDCLILASDGLWDVMNNEEACDV 344
Y P++ +P+V + +D L+LA+DGLW+ M+ ++ +
Sbjct: 306 NDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRI 361
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 236 LIIVANCGDSRAVLCRGKVPVP-LSVDHKPDREDELARIEAAGGKVIQWNGSRVFGVLAM 294
L+ N GDSRA L + LS DHKP+ E +RIE AGG V ++ RV GVLA+
Sbjct: 174 LVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLAL 233
Query: 295 SRSIGDRYLK 304
SR+ GD K
Sbjct: 234 SRAFGDSDFK 243
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 149 FFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLK-VDS 207
+GV++G+ G +V N+ +R+ L + A+ D Q SFL+ +D
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 125
Query: 208 EIG--GALGGEPVAPE----TAGSTAVVAIISPTLIIVANCGDSRAVLCRGKVP----VP 257
+ +L E + + G+ AVVA++ + VAN G +RA+LC+ V
Sbjct: 126 ALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQ 185
Query: 258 LSVDHKPDREDELARIEAAG---GKVIQWNGSRVFGVLA---MSRSIGDRYLKPWIIPDP 311
L+VDH + EDEL R+ G GK+ Q G++ +R IGD +K + D
Sbjct: 186 LNVDHTTENEDELFRLSQLGLDAGKIKQ------VGIICGQESTRRIGDYKVK-YGYTDI 238
Query: 312 DVMFVPRAK 320
D++ ++K
Sbjct: 239 DLLSAAKSK 247
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 43/208 (20%)
Query: 149 FFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLK-VDS 207
+GV++G+ G +V N+ +R+ L + A+ D Q SFL+ +D
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 125
Query: 208 EIGGALGGEPVAPE-------------------------TAGSTAVVAIISPTLIIVANC 242
+ + PE + G+ AVVA++ + VAN
Sbjct: 126 ALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANV 185
Query: 243 GDSRAVLCRGKVP----VPLSVDHKPDREDELARIEAAG---GKVIQWNGSRVFGVLA-- 293
G +RA+LC+ V L+VDH + EDEL R+ G GK+ Q G++
Sbjct: 186 GTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQ------VGIICGQ 239
Query: 294 -MSRSIGDRYLKPWIIPDPDVMFVPRAK 320
+R IGD +K + D D++ ++K
Sbjct: 240 ESTRRIGDYKVK-YGYTDIDLLSAAKSK 266
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 59/240 (24%)
Query: 149 FFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQEQWKKAFANSFLK-VDS 207
+GV++G+ G +V N+ +R+ L + A+ D Q SFL+ +D
Sbjct: 64 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 123
Query: 208 EIGGALGGEPVAPE-------------------------TAGSTAVVAIISPTLIIVANC 242
+ + PE + G+ AVVA++ + VAN
Sbjct: 124 ALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANV 183
Query: 243 GDSRAVLCRGKVP----VPLSVDHKPDREDELARIEAAG---GKVIQWNGSRVFGVLA-- 293
G +RA+LC+ V L+VDH + EDEL R+ G GK+ Q G++
Sbjct: 184 GTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQ------VGIICGQ 237
Query: 294 -MSRSIGDRYLKPWIIPDPDVMFVPRAKE----------------DDCLILASDGLWDVM 336
+R IGD +K + D D++ ++K L+L S+GL+ +
Sbjct: 238 ESTRRIGDYKVK-YGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKAL 296
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 32/154 (20%)
Query: 181 KARLQDGGSWQEQWKKAFANSFLKVDSEIGGALGGEPVAPETAGSTAVVAIISPTLIIVA 240
+ L G Q + + F N K+DS + AL + GS+AV+A+I + + +
Sbjct: 120 QLHLSADGMNQYEISQQFENVLQKLDS-LNNAL--------SVGSSAVLALIHRSHLYLG 170
Query: 241 NCGDSRAVLCRGK-----VPVPLSVDHKPDREDELARIEAAGGKVIQWNGSRVFGVLAMS 295
N G+ RA+LC+ LSVDH +E AR+ G + G ++ +
Sbjct: 171 NIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPLYS----T 226
Query: 296 RSIGDRYLKPWIIPDPDVMFVPRAKEDDCLILAS 329
R IG+ ++ +A DC L+S
Sbjct: 227 RCIGN--------------YLGKAGYKDCNFLSS 246
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 237 IIVANCGDSRAVLCRGKVPVPLSVDHKPDREDELARIEAAGGKVIQWNGSRVF-GVLAMS 295
I VA+ G+SR VL G+ + LS H E R++AAGG NG + GV+ +
Sbjct: 168 IHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPXT 227
Query: 296 RSIG 299
R+ G
Sbjct: 228 RAFG 231
>pdb|2ITM|A Chain A, Crystal Structure Of The E. Coli Xylulose Kinase Complexed
With Xylulose
pdb|2ITM|B Chain B, Crystal Structure Of The E. Coli Xylulose Kinase Complexed
With Xylulose
pdb|2NLX|A Chain A, Crystal Structure Of The Apo E. Coli Xylulose Kinase
pdb|2NLX|B Chain B, Crystal Structure Of The Apo E. Coli Xylulose Kinase
Length = 484
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 149 FFGVYDGHGGCQVANYCCERMHLALAEELVTAKA--------RLQDGGSWQEQWKKAFAN 200
FFG+ HG ++A E + ALA+ + A L GG+ E W++ A+
Sbjct: 349 FFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLAD 408
Query: 201 -SFLKVDSEIGGALG 214
S ++D GG +G
Sbjct: 409 ISGQQLDYRTGGDVG 423
>pdb|1RGY|A Chain A, Citrobacter Freundii Gn346 Class C Beta-Lactamase
Complexed With Transition-State Analog Of Cefotaxime
Length = 360
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 133 LMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQE 192
L D VT +P+ + G+ H +A Y + L + +++ A L+ +WQ
Sbjct: 84 LSDPVTKYWPELTGKQWRGISLLH----LATYTAGGLPLQIPDDITDKAALLRFYQNWQP 139
Query: 193 QW----KKAFANSFLKVDSEIGGALGGEP 217
QW K+ +ANS + + GAL +P
Sbjct: 140 QWTPGAKRLYANSSIG----LFGALAVKP 164
>pdb|3U4G|A Chain A, The Structure Of Cobt From Pyrococcus Horikoshii
Length = 337
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 277 GGKVIQWNGSRVFGVLAMSRSIGD---RY---LKPWIIPDPDVMFVPRAKE 321
GG V+ G++ V A+ +S+G+ R+ W++ DP F+ A+E
Sbjct: 221 GGDVVLAGGTQXLAVSALLKSLGEDLSRFXIATTRWVVEDPSATFIETARE 271
>pdb|3EB7|A Chain A, Crystal Structure Of Insecticidal Delta-Endotoxin Cry8ea1
From Bacillus Thuringiensis At 2.2 Angstroms Resolution
pdb|3EB7|B Chain B, Crystal Structure Of Insecticidal Delta-Endotoxin Cry8ea1
From Bacillus Thuringiensis At 2.2 Angstroms Resolution
pdb|3EB7|C Chain C, Crystal Structure Of Insecticidal Delta-Endotoxin Cry8ea1
From Bacillus Thuringiensis At 2.2 Angstroms Resolution
Length = 589
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 207 SEIGGALGGEPVAPETAGSTAVVAI 231
+E+G LGG+P++ ++GST V+ +
Sbjct: 465 NEVGHYLGGDPISFNSSGSTGVIRL 489
>pdb|1FR1|A Chain A, Refined Crystal Structure Of Beta-Lactamase From
Citrobacter Freundii Indicates A Mechanism For
Beta-Lactam Hydrolysis
pdb|1FR1|B Chain B, Refined Crystal Structure Of Beta-Lactamase From
Citrobacter Freundii Indicates A Mechanism For
Beta-Lactam Hydrolysis
pdb|1FR6|A Chain A, Refined Crystal Structure Of Beta-Lactamase From
Citrobacter Freundii Indicates A Mechanism For
Beta-Lactam Hydrolysis
pdb|1FR6|B Chain B, Refined Crystal Structure Of Beta-Lactamase From
Citrobacter Freundii Indicates A Mechanism For
Beta-Lactam Hydrolysis
Length = 361
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 133 LMDTVTDQFPDQVLVHFFGVYDGHGGCQVANYCCERMHLALAEELVTAKARLQDGGSWQE 192
L D VT +P+ + G+ H +A Y + L + +++ A L+ +WQ
Sbjct: 85 LSDPVTQYWPELTGKQWQGISLLH----LATYTAGGLPLQVPDDVTDKAALLRFYQNWQP 140
Query: 193 QW----KKAFANSFLKVDSEIGGALGGEP 217
QW K+ +ANS + + GAL +P
Sbjct: 141 QWAPGAKRLYANSSIG----LFGALAVKP 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,641,739
Number of Sequences: 62578
Number of extensions: 444408
Number of successful extensions: 1050
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 967
Number of HSP's gapped (non-prelim): 39
length of query: 345
length of database: 14,973,337
effective HSP length: 100
effective length of query: 245
effective length of database: 8,715,537
effective search space: 2135306565
effective search space used: 2135306565
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)