Query 019157
Match_columns 345
No_of_seqs 270 out of 1389
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 07:09:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019157.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019157hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 99.9 1.3E-25 2.7E-30 200.6 20.0 211 2-283 23-254 (255)
2 PRK03592 haloalkane dehalogena 99.9 7.9E-26 1.7E-30 206.1 18.8 222 2-284 47-291 (295)
3 KOG4178 Soluble epoxide hydrol 99.9 6.3E-26 1.4E-30 200.6 17.3 221 2-282 64-320 (322)
4 PRK00870 haloalkane dehalogena 99.9 1.2E-25 2.6E-30 205.7 17.9 222 2-282 66-301 (302)
5 PLN02824 hydrolase, alpha/beta 99.9 7.4E-25 1.6E-29 199.6 21.5 225 2-281 49-293 (294)
6 TIGR02240 PHA_depoly_arom poly 99.9 3E-25 6.6E-30 200.4 17.5 216 2-285 45-269 (276)
7 PRK03204 haloalkane dehalogena 99.9 1.2E-24 2.6E-29 197.5 18.2 219 2-279 54-285 (286)
8 PLN02679 hydrolase, alpha/beta 99.9 8.8E-24 1.9E-28 197.8 21.2 219 2-283 108-358 (360)
9 TIGR03343 biphenyl_bphD 2-hydr 99.9 1.4E-23 3E-28 189.7 21.2 189 91-281 86-282 (282)
10 PLN02578 hydrolase 99.9 2.7E-23 5.8E-28 194.2 21.8 218 2-280 106-353 (354)
11 PRK10673 acyl-CoA esterase; Pr 99.9 1.8E-23 3.9E-28 186.1 19.4 208 2-281 36-254 (255)
12 PRK06489 hypothetical protein; 99.9 3.9E-23 8.4E-28 193.7 20.8 194 86-284 132-359 (360)
13 PRK10349 carboxylesterase BioH 99.9 2.8E-23 6E-28 185.4 18.4 213 2-281 33-255 (256)
14 PF12697 Abhydrolase_6: Alpha/ 99.9 3.5E-23 7.6E-28 178.9 16.7 207 2-274 18-228 (228)
15 PRK07581 hypothetical protein; 99.9 5.3E-23 1.2E-27 191.2 18.9 184 98-283 115-337 (339)
16 PLN03084 alpha/beta hydrolase 99.9 6.8E-23 1.5E-27 191.9 19.6 221 2-280 147-382 (383)
17 PLN03087 BODYGUARD 1 domain co 99.9 1.5E-22 3.1E-27 193.5 21.2 216 8-281 231-478 (481)
18 PRK11126 2-succinyl-6-hydroxy- 99.9 2.3E-22 5E-27 177.6 20.9 186 88-281 48-241 (242)
19 KOG4409 Predicted hydrolase/ac 99.9 1.1E-22 2.4E-27 180.5 18.6 224 2-282 110-364 (365)
20 TIGR03056 bchO_mg_che_rel puta 99.9 2.9E-22 6.3E-27 180.2 20.9 217 2-280 48-278 (278)
21 PRK08775 homoserine O-acetyltr 99.9 2.6E-22 5.7E-27 186.8 19.9 189 87-283 118-340 (343)
22 PLN02211 methyl indole-3-aceta 99.9 8.7E-22 1.9E-26 177.4 19.9 214 2-282 38-270 (273)
23 TIGR03611 RutD pyrimidine util 99.9 2.4E-21 5.3E-26 171.5 19.4 217 3-281 34-257 (257)
24 PLN02385 hydrolase; alpha/beta 99.9 4.7E-22 1E-26 185.6 15.0 216 2-282 108-345 (349)
25 TIGR01250 pro_imino_pep_2 prol 99.9 6.1E-21 1.3E-25 171.5 20.9 217 4-280 48-288 (288)
26 TIGR01738 bioH putative pimelo 99.9 2.1E-21 4.6E-26 170.1 17.0 211 2-279 24-245 (245)
27 KOG1454 Predicted hydrolase/ac 99.9 1.3E-21 2.7E-26 179.5 15.6 194 86-282 108-324 (326)
28 TIGR03695 menH_SHCHC 2-succiny 99.9 6.4E-21 1.4E-25 167.2 19.5 219 2-280 21-251 (251)
29 TIGR02427 protocat_pcaD 3-oxoa 99.9 5.7E-21 1.2E-25 167.8 18.0 213 2-280 33-251 (251)
30 TIGR01392 homoserO_Ac_trn homo 99.9 1.3E-20 2.9E-25 175.9 18.8 193 86-280 106-351 (351)
31 PHA02857 monoglyceride lipase; 99.9 5.1E-21 1.1E-25 172.6 13.8 216 2-282 45-273 (276)
32 PLN02298 hydrolase, alpha/beta 99.9 8.6E-21 1.9E-25 175.8 15.4 214 3-285 81-320 (330)
33 PF00561 Abhydrolase_1: alpha/ 99.9 1.7E-20 3.7E-25 163.5 15.7 190 86-276 24-229 (230)
34 PLN02894 hydrolase, alpha/beta 99.9 8.7E-20 1.9E-24 173.0 21.4 193 90-285 160-388 (402)
35 PRK00175 metX homoserine O-ace 99.8 5.3E-20 1.1E-24 173.5 18.8 197 86-283 126-375 (379)
36 PRK10749 lysophospholipase L2; 99.8 2E-20 4.3E-25 173.3 15.0 226 2-282 74-329 (330)
37 PLN02980 2-oxoglutarate decarb 99.8 1.4E-19 3E-24 196.2 20.6 229 2-285 1391-1642(1655)
38 PRK06765 homoserine O-acetyltr 99.8 3.6E-18 7.9E-23 160.4 21.7 195 86-281 140-387 (389)
39 PRK14875 acetoin dehydrogenase 99.8 4.8E-18 1E-22 159.7 20.8 187 87-281 178-370 (371)
40 TIGR01249 pro_imino_pep_1 prol 99.8 2.1E-18 4.5E-23 158.1 17.6 83 5-142 49-131 (306)
41 COG2267 PldB Lysophospholipase 99.8 3.8E-18 8.3E-23 154.9 16.2 224 1-284 53-296 (298)
42 PLN02652 hydrolase; alpha/beta 99.8 1.9E-17 4.1E-22 156.1 16.8 215 2-283 156-388 (395)
43 TIGR03100 hydr1_PEP hydrolase, 99.8 2E-17 4.3E-22 149.2 15.9 204 2-280 50-273 (274)
44 PLN02511 hydrolase 99.7 9.4E-18 2E-22 158.4 11.5 63 218-283 294-366 (388)
45 PRK05855 short chain dehydroge 99.7 4.7E-17 1E-21 161.8 16.8 61 223-283 233-293 (582)
46 KOG2382 Predicted alpha/beta h 99.7 6.8E-16 1.5E-20 137.1 19.5 188 87-281 100-312 (315)
47 TIGR01607 PST-A Plasmodium sub 99.7 1.3E-16 2.9E-21 147.7 14.8 58 223-280 270-331 (332)
48 PRK05077 frsA fermentation/res 99.7 7.2E-16 1.6E-20 146.4 19.9 193 2-281 215-411 (414)
49 KOG2984 Predicted hydrolase [G 99.7 2.7E-16 5.8E-21 129.1 10.7 171 92-282 100-276 (277)
50 TIGR01836 PHA_synth_III_C poly 99.7 3.4E-15 7.3E-20 139.4 19.7 223 2-281 87-349 (350)
51 TIGR01838 PHA_synth_I poly(R)- 99.7 3.9E-15 8.4E-20 144.0 19.5 211 2-269 213-462 (532)
52 COG1647 Esterase/lipase [Gener 99.6 1.2E-14 2.5E-19 121.6 17.0 197 2-281 35-243 (243)
53 KOG1455 Lysophospholipase [Lip 99.6 1.1E-15 2.4E-20 133.8 11.4 213 2-281 75-311 (313)
54 PF03096 Ndr: Ndr family; Int 99.6 3.8E-14 8.1E-19 124.8 18.8 188 88-281 81-278 (283)
55 PRK10985 putative hydrolase; P 99.6 6.3E-15 1.4E-19 136.2 13.1 218 2-281 80-319 (324)
56 KOG2931 Differentiation-relate 99.6 1.2E-13 2.6E-18 120.0 19.4 192 88-282 104-306 (326)
57 COG0596 MhpC Predicted hydrola 99.6 9E-14 1.9E-18 121.7 15.3 53 90-142 72-124 (282)
58 PLN02872 triacylglycerol lipas 99.5 4.4E-13 9.5E-18 126.2 16.3 59 223-283 325-390 (395)
59 PRK13604 luxD acyl transferase 99.5 2.6E-13 5.7E-18 121.8 14.0 84 2-141 57-141 (307)
60 PF06342 DUF1057: Alpha/beta h 99.5 1.3E-12 2.9E-17 113.8 17.4 84 1-142 54-138 (297)
61 COG2021 MET2 Homoserine acetyl 99.5 7.3E-13 1.6E-17 119.6 15.4 195 86-281 126-367 (368)
62 PRK11071 esterase YqiA; Provis 99.5 1.7E-12 3.7E-17 110.5 15.2 143 91-280 46-189 (190)
63 PRK07868 acyl-CoA synthetase; 99.5 3.4E-12 7.3E-17 134.3 20.0 76 218-302 293-375 (994)
64 KOG2564 Predicted acetyltransf 99.5 7.2E-14 1.6E-18 120.5 5.2 54 86-140 123-181 (343)
65 PRK10566 esterase; Provisional 99.4 2.8E-12 6E-17 113.8 14.2 55 223-281 186-247 (249)
66 TIGR03101 hydr2_PEP hydrolase, 99.4 1.1E-12 2.4E-17 116.8 9.4 84 2-142 49-135 (266)
67 PF00326 Peptidase_S9: Prolyl 99.4 1.6E-11 3.5E-16 106.4 15.9 154 90-282 46-209 (213)
68 COG3208 GrsT Predicted thioest 99.4 5.9E-11 1.3E-15 101.6 16.7 174 87-281 54-235 (244)
69 PF12695 Abhydrolase_5: Alpha/ 99.3 5.8E-11 1.2E-15 96.0 11.5 36 103-139 58-93 (145)
70 KOG1552 Predicted alpha/beta h 99.2 8.2E-11 1.8E-15 101.4 11.5 126 101-284 124-254 (258)
71 TIGR01839 PHA_synth_II poly(R) 99.1 1.8E-09 3.9E-14 104.0 16.5 81 1-141 239-328 (560)
72 KOG2565 Predicted hydrolases o 99.1 6.2E-10 1.4E-14 99.9 11.8 75 10-140 189-263 (469)
73 TIGR03230 lipo_lipase lipoprot 99.1 3.1E-10 6.7E-15 107.3 9.8 53 90-142 97-155 (442)
74 KOG4667 Predicted esterase [Li 99.1 1.2E-09 2.6E-14 91.2 11.4 196 2-280 55-256 (269)
75 PF00975 Thioesterase: Thioest 99.0 2.2E-08 4.8E-13 87.5 17.1 55 88-142 47-105 (229)
76 TIGR01849 PHB_depoly_PhaZ poly 99.0 4E-08 8.7E-13 92.0 18.0 55 86-141 149-208 (406)
77 PLN02442 S-formylglutathione h 99.0 2.6E-08 5.5E-13 90.3 15.5 53 89-141 126-178 (283)
78 cd00707 Pancreat_lipase_like P 99.0 1.8E-09 3.9E-14 97.2 7.9 52 91-142 95-148 (275)
79 PLN00021 chlorophyllase 98.9 3.2E-08 7E-13 90.6 14.5 39 103-141 123-166 (313)
80 PF06500 DUF1100: Alpha/beta h 98.9 9.5E-08 2.1E-12 88.9 16.5 191 3-281 212-408 (411)
81 PRK11460 putative hydrolase; P 98.9 1E-07 2.2E-12 83.8 15.9 49 91-139 86-136 (232)
82 TIGR02821 fghA_ester_D S-formy 98.9 1.7E-07 3.7E-12 84.6 17.7 51 91-141 120-173 (275)
83 COG0429 Predicted hydrolase of 98.8 1.2E-07 2.6E-12 84.8 14.7 62 218-282 270-340 (345)
84 COG4757 Predicted alpha/beta h 98.8 2.3E-08 4.9E-13 84.6 9.5 213 3-279 51-280 (281)
85 COG1506 DAP2 Dipeptidyl aminop 98.8 8.1E-08 1.8E-12 96.3 13.9 156 88-283 453-617 (620)
86 KOG4391 Predicted alpha/beta h 98.8 1.1E-08 2.4E-13 85.5 5.8 135 105-285 148-285 (300)
87 KOG1838 Alpha/beta hydrolase [ 98.7 1.7E-07 3.7E-12 86.7 12.8 86 2-140 147-235 (409)
88 COG3243 PhaC Poly(3-hydroxyalk 98.7 4.9E-07 1.1E-11 83.3 15.2 52 90-141 165-217 (445)
89 COG2945 Predicted hydrolase of 98.7 2.1E-07 4.5E-12 76.8 11.3 54 223-280 149-205 (210)
90 PRK10252 entF enterobactin syn 98.7 4E-07 8.7E-12 99.1 17.1 56 86-141 1112-1171(1296)
91 PLN02733 phosphatidylcholine-s 98.7 2.6E-08 5.6E-13 94.8 6.3 52 90-141 146-201 (440)
92 PRK05371 x-prolyl-dipeptidyl a 98.7 6.7E-07 1.4E-11 91.2 16.6 35 106-140 338-372 (767)
93 PF06057 VirJ: Bacterial virul 98.7 1.5E-07 3.2E-12 78.3 9.5 136 90-281 48-191 (192)
94 TIGR01840 esterase_phb esteras 98.7 5.5E-07 1.2E-11 78.0 13.1 51 91-141 78-130 (212)
95 TIGR00976 /NonD putative hydro 98.7 3.7E-08 8.1E-13 97.5 6.5 81 3-141 47-132 (550)
96 PF10230 DUF2305: Uncharacteri 98.6 3E-06 6.4E-11 76.0 17.8 167 86-257 58-257 (266)
97 PF09752 DUF2048: Uncharacteri 98.6 1.9E-06 4.2E-11 78.3 15.6 175 95-280 164-347 (348)
98 PRK10162 acetyl esterase; Prov 98.5 4.2E-06 9.2E-11 77.1 15.2 50 92-141 138-195 (318)
99 COG3319 Thioesterase domains o 98.5 8.4E-06 1.8E-10 72.0 15.3 55 88-142 46-104 (257)
100 PF01738 DLH: Dienelactone hyd 98.5 1.5E-06 3.2E-11 75.5 10.5 49 90-139 76-130 (218)
101 PF05728 UPF0227: Uncharacteri 98.4 6.6E-06 1.4E-10 69.5 13.5 54 86-142 39-92 (187)
102 TIGR03502 lipase_Pla1_cef extr 98.4 7.3E-07 1.6E-11 89.8 8.6 39 88-126 521-575 (792)
103 PF06821 Ser_hydrolase: Serine 98.4 2.2E-06 4.8E-11 71.4 8.6 115 90-267 40-158 (171)
104 smart00824 PKS_TE Thioesterase 98.3 8.5E-06 1.9E-10 69.5 12.5 53 90-142 47-103 (212)
105 PF08538 DUF1749: Protein of u 98.3 5E-06 1.1E-10 74.5 10.0 53 90-142 88-149 (303)
106 COG0400 Predicted esterase [Ge 98.3 7.7E-06 1.7E-10 70.0 10.5 55 87-141 78-134 (207)
107 PF02129 Peptidase_S15: X-Pro 98.3 2.1E-05 4.5E-10 70.9 13.7 82 5-141 53-136 (272)
108 PF02230 Abhydrolase_2: Phosph 98.3 1.5E-05 3.3E-10 69.2 12.2 37 105-141 104-140 (216)
109 PF05448 AXE1: Acetyl xylan es 98.2 6.6E-05 1.4E-09 69.0 16.4 142 106-281 175-319 (320)
110 PTZ00472 serine carboxypeptida 98.2 8.2E-05 1.8E-09 71.9 16.7 52 90-141 148-216 (462)
111 COG3571 Predicted hydrolase of 98.2 7.3E-05 1.6E-09 60.1 13.1 51 90-140 73-123 (213)
112 PF07859 Abhydrolase_3: alpha/ 98.1 5.8E-05 1.2E-09 65.0 12.4 52 90-141 50-110 (211)
113 KOG2624 Triglyceride lipase-ch 98.1 8.6E-05 1.9E-09 69.8 14.3 96 4-142 101-200 (403)
114 COG3545 Predicted esterase of 98.1 0.0001 2.2E-09 60.4 12.0 130 89-281 43-178 (181)
115 PF06028 DUF915: Alpha/beta hy 98.1 9.1E-05 2E-09 65.6 12.8 51 92-142 89-144 (255)
116 COG3458 Acetyl esterase (deace 98.0 7.7E-05 1.7E-09 65.1 10.9 142 104-282 174-317 (321)
117 COG0412 Dienelactone hydrolase 97.9 0.00034 7.3E-09 61.6 14.1 50 90-140 90-145 (236)
118 PF08840 BAAT_C: BAAT / Acyl-C 97.9 1.5E-05 3.3E-10 69.0 5.4 35 106-141 22-56 (213)
119 PF02273 Acyl_transf_2: Acyl t 97.9 8E-05 1.7E-09 64.0 9.4 79 2-139 50-132 (294)
120 PF12146 Hydrolase_4: Putative 97.9 1.2E-05 2.6E-10 57.8 3.8 25 1-25 35-59 (79)
121 PF07819 PGAP1: PGAP1-like pro 97.8 8.4E-05 1.8E-09 64.9 7.9 51 91-141 65-123 (225)
122 PRK10115 protease 2; Provision 97.8 0.0012 2.7E-08 67.1 16.9 53 88-141 504-559 (686)
123 KOG1553 Predicted alpha/beta h 97.8 6.9E-05 1.5E-09 67.3 6.8 47 93-140 295-344 (517)
124 PF03583 LIP: Secretory lipase 97.7 0.00052 1.1E-08 62.3 12.3 42 223-264 219-266 (290)
125 PF12740 Chlorophyllase2: Chlo 97.7 8.7E-05 1.9E-09 65.3 6.9 38 104-141 89-131 (259)
126 KOG4627 Kynurenine formamidase 97.7 0.00011 2.3E-09 61.5 6.6 129 90-267 119-252 (270)
127 PF03959 FSH1: Serine hydrolas 97.6 0.00025 5.4E-09 61.4 7.3 110 88-267 85-206 (212)
128 KOG1551 Uncharacterized conser 97.5 0.0017 3.7E-08 56.5 11.9 168 102-283 191-367 (371)
129 KOG2281 Dipeptidyl aminopeptid 97.4 0.0036 7.8E-08 60.9 13.0 52 88-139 706-760 (867)
130 PF12715 Abhydrolase_7: Abhydr 97.3 0.00099 2.1E-08 61.6 7.6 34 106-140 226-259 (390)
131 cd00741 Lipase Lipase. Lipase 97.2 0.0007 1.5E-08 55.2 5.9 47 95-141 17-67 (153)
132 PF01674 Lipase_2: Lipase (cla 97.2 0.00049 1.1E-08 59.5 4.7 48 90-139 60-107 (219)
133 COG0657 Aes Esterase/lipase [L 97.2 0.016 3.5E-07 53.1 15.0 52 90-141 131-191 (312)
134 KOG2551 Phospholipase/carboxyh 97.2 0.0095 2.1E-07 50.8 11.9 55 223-281 163-219 (230)
135 PF00450 Peptidase_S10: Serine 97.1 0.017 3.7E-07 55.0 14.9 56 223-280 330-414 (415)
136 PF05677 DUF818: Chlamydia CHL 97.1 0.0028 6.2E-08 57.5 8.3 23 106-128 215-237 (365)
137 KOG2100 Dipeptidyl aminopeptid 97.0 0.018 3.9E-07 59.1 14.8 151 88-282 588-747 (755)
138 PF07224 Chlorophyllase: Chlor 97.0 0.0015 3.3E-08 56.9 5.8 38 104-141 118-157 (307)
139 KOG3975 Uncharacterized conser 97.0 0.033 7.1E-07 48.4 13.7 189 86-279 88-300 (301)
140 COG1075 LipA Predicted acetylt 97.0 0.0015 3.3E-08 60.6 6.2 52 90-141 111-164 (336)
141 PF00151 Lipase: Lipase; Inte 96.9 0.0022 4.8E-08 59.2 6.9 52 91-142 133-188 (331)
142 PF05990 DUF900: Alpha/beta hy 96.9 0.0046 1E-07 54.3 8.3 52 90-141 77-137 (233)
143 PF10142 PhoPQ_related: PhoPQ- 96.9 0.022 4.8E-07 53.1 13.0 161 93-284 156-322 (367)
144 PF08386 Abhydrolase_4: TAP-li 96.8 0.0052 1.1E-07 46.6 7.0 59 223-281 34-93 (103)
145 KOG1515 Arylacetamide deacetyl 96.8 0.06 1.3E-06 49.7 14.9 58 85-142 139-208 (336)
146 PF02450 LCAT: Lecithin:choles 96.8 0.0022 4.7E-08 60.8 5.4 52 91-142 101-161 (389)
147 KOG3043 Predicted hydrolase re 96.7 0.0088 1.9E-07 51.1 8.3 33 105-138 119-151 (242)
148 PF00756 Esterase: Putative es 96.7 0.0026 5.7E-08 56.2 5.3 52 90-141 96-150 (251)
149 PF11339 DUF3141: Protein of u 96.7 0.2 4.3E-06 48.2 17.8 55 87-141 116-175 (581)
150 PF05577 Peptidase_S28: Serine 96.6 0.0073 1.6E-07 58.2 8.1 56 87-142 87-149 (434)
151 PRK04940 hypothetical protein; 96.5 0.0082 1.8E-07 50.0 6.7 53 88-143 38-94 (180)
152 PF10503 Esterase_phd: Esteras 96.5 0.0074 1.6E-07 52.3 6.4 50 92-141 81-132 (220)
153 PF04301 DUF452: Protein of un 96.5 0.058 1.2E-06 46.4 11.6 39 104-144 55-93 (213)
154 PF01764 Lipase_3: Lipase (cla 96.4 0.0074 1.6E-07 48.1 5.7 38 90-127 48-85 (140)
155 PRK10439 enterobactin/ferric e 96.3 0.011 2.5E-07 56.3 6.8 50 91-140 268-322 (411)
156 PF11187 DUF2974: Protein of u 96.1 0.023 5E-07 49.5 7.6 50 92-142 71-124 (224)
157 COG2936 Predicted acyl esteras 95.9 0.018 3.9E-07 56.2 6.2 83 4-141 75-159 (563)
158 cd00519 Lipase_3 Lipase (class 95.8 0.011 2.4E-07 51.6 4.4 36 92-127 114-149 (229)
159 PLN02454 triacylglycerol lipas 95.7 0.028 6E-07 53.0 6.6 37 90-126 210-248 (414)
160 PF05057 DUF676: Putative seri 95.6 0.017 3.7E-07 50.1 4.6 36 90-125 60-97 (217)
161 PLN02517 phosphatidylcholine-s 95.6 0.014 3E-07 57.0 4.1 41 101-141 208-263 (642)
162 KOG3101 Esterase D [General fu 95.3 0.0034 7.3E-08 53.0 -0.9 51 93-143 124-178 (283)
163 COG2819 Predicted hydrolase of 95.3 0.037 7.9E-07 48.8 5.4 37 105-141 136-172 (264)
164 PF05705 DUF829: Eukaryotic pr 95.2 1.1 2.4E-05 39.2 15.0 55 223-279 178-240 (240)
165 PLN02162 triacylglycerol lipas 95.1 0.057 1.2E-06 51.5 6.5 36 90-125 262-297 (475)
166 PF05277 DUF726: Protein of un 95.1 0.061 1.3E-06 49.7 6.6 57 92-148 204-267 (345)
167 PF03403 PAF-AH_p_II: Platelet 95.1 0.012 2.7E-07 55.4 2.1 38 103-141 225-262 (379)
168 PF07082 DUF1350: Protein of u 95.0 0.63 1.4E-05 40.8 12.2 35 107-141 91-125 (250)
169 COG4814 Uncharacterized protei 94.9 0.053 1.1E-06 47.3 5.2 48 94-141 124-176 (288)
170 PLN00413 triacylglycerol lipas 94.8 0.087 1.9E-06 50.4 6.8 35 91-125 269-303 (479)
171 PF06259 Abhydrolase_8: Alpha/ 94.7 0.12 2.7E-06 43.1 6.9 54 90-143 88-146 (177)
172 PLN02571 triacylglycerol lipas 94.5 0.073 1.6E-06 50.2 5.7 37 90-126 208-246 (413)
173 PF10340 DUF2424: Protein of u 94.4 0.28 6E-06 45.8 9.2 58 86-143 175-237 (374)
174 PF11288 DUF3089: Protein of u 94.4 0.075 1.6E-06 45.4 5.1 43 85-127 73-116 (207)
175 PF01083 Cutinase: Cutinase; 94.4 0.063 1.4E-06 45.1 4.6 53 89-141 64-122 (179)
176 KOG3253 Predicted alpha/beta h 94.4 0.17 3.6E-06 49.5 7.7 42 223-264 304-347 (784)
177 COG4782 Uncharacterized protei 94.2 0.095 2.1E-06 48.1 5.5 55 86-140 171-233 (377)
178 KOG2369 Lecithin:cholesterol a 94.2 0.056 1.2E-06 51.2 4.1 53 88-140 164-224 (473)
179 COG4188 Predicted dienelactone 94.1 0.083 1.8E-06 48.8 5.0 49 223-271 251-303 (365)
180 COG4099 Predicted peptidase [G 94.1 0.1 2.2E-06 46.7 5.2 51 91-141 251-304 (387)
181 PLN02310 triacylglycerol lipas 93.9 0.12 2.7E-06 48.6 5.8 37 90-126 189-229 (405)
182 COG1770 PtrB Protease II [Amin 93.9 0.87 1.9E-05 45.2 11.6 55 87-141 506-562 (682)
183 COG0627 Predicted esterase [Ge 93.8 0.091 2E-06 48.2 4.7 37 107-143 153-189 (316)
184 KOG2183 Prolylcarboxypeptidase 93.5 0.17 3.8E-06 47.2 5.9 51 90-140 149-201 (492)
185 COG3509 LpqC Poly(3-hydroxybut 93.4 0.23 4.9E-06 44.5 6.3 52 90-141 126-179 (312)
186 PLN02408 phospholipase A1 93.3 0.14 3E-06 47.6 5.1 37 90-126 182-220 (365)
187 KOG4840 Predicted hydrolases o 93.2 0.056 1.2E-06 46.2 2.1 52 90-141 87-144 (299)
188 PLN02753 triacylglycerol lipas 93.0 0.14 3E-06 49.6 4.7 36 90-125 291-331 (531)
189 PF12048 DUF3530: Protein of u 93.0 0.39 8.5E-06 44.0 7.5 50 93-142 180-230 (310)
190 PLN02934 triacylglycerol lipas 92.7 0.19 4.1E-06 48.5 5.1 36 90-125 305-340 (515)
191 COG4553 DepA Poly-beta-hydroxy 92.5 3.7 8E-05 36.9 12.3 55 86-141 150-209 (415)
192 PLN02719 triacylglycerol lipas 92.4 0.19 4.2E-06 48.4 4.7 37 90-126 277-318 (518)
193 COG3946 VirJ Type IV secretory 92.4 0.24 5.2E-06 46.2 5.1 40 90-129 306-349 (456)
194 KOG3724 Negative regulator of 92.2 0.094 2E-06 52.6 2.4 34 107-140 183-219 (973)
195 PLN02761 lipase class 3 family 92.1 0.22 4.8E-06 48.1 4.7 36 90-125 272-313 (527)
196 COG3150 Predicted esterase [Ge 92.0 0.39 8.5E-06 39.3 5.3 54 86-142 39-92 (191)
197 PLN02324 triacylglycerol lipas 91.9 0.28 6E-06 46.4 5.0 37 90-126 197-235 (415)
198 PLN02802 triacylglycerol lipas 91.5 0.32 6.9E-06 47.0 5.1 37 90-126 312-350 (509)
199 PLN03037 lipase class 3 family 90.2 0.47 1E-05 46.0 4.9 37 90-126 298-338 (525)
200 cd00312 Esterase_lipase Estera 90.1 0.41 8.9E-06 46.8 4.7 49 93-141 161-213 (493)
201 PLN02847 triacylglycerol lipas 89.6 0.62 1.3E-05 45.9 5.3 31 96-126 241-271 (633)
202 KOG3847 Phospholipase A2 (plat 89.4 0.19 4.2E-06 45.2 1.5 40 101-141 236-275 (399)
203 PF11144 DUF2920: Protein of u 89.1 1 2.2E-05 42.4 6.1 36 107-142 185-220 (403)
204 KOG2182 Hydrolytic enzymes of 88.8 1.2 2.6E-05 42.8 6.5 55 87-141 146-207 (514)
205 KOG4569 Predicted lipase [Lipi 88.8 0.78 1.7E-05 42.6 5.2 37 90-126 155-191 (336)
206 KOG3967 Uncharacterized conser 88.5 1.2 2.6E-05 38.0 5.5 44 97-140 181-226 (297)
207 PLN02633 palmitoyl protein thi 88.4 1.3 2.8E-05 40.2 6.1 35 106-140 94-130 (314)
208 PLN02213 sinapoylglucose-malat 87.9 1.8 3.8E-05 39.9 6.9 52 90-141 32-96 (319)
209 PLN02606 palmitoyl-protein thi 87.4 1.5 3.3E-05 39.7 5.9 35 106-140 95-131 (306)
210 KOG2112 Lysophospholipase [Lip 87.0 6.3 0.00014 33.6 9.0 49 91-139 73-126 (206)
211 COG2382 Fes Enterochelin ester 86.9 0.49 1.1E-05 42.5 2.5 35 107-141 178-212 (299)
212 PF02089 Palm_thioest: Palmito 83.9 3.6 7.9E-05 36.9 6.6 50 90-140 62-115 (279)
213 COG2939 Carboxypeptidase C (ca 83.6 2.7 5.8E-05 40.6 5.9 30 252-281 460-490 (498)
214 PRK13263 ureE urease accessory 83.1 1.7 3.7E-05 37.0 3.9 9 224-232 78-86 (206)
215 PF08237 PE-PPE: PE-PPE domain 80.9 7.3 0.00016 33.9 7.2 37 105-141 47-89 (225)
216 COG4947 Uncharacterized protei 79.4 2.6 5.7E-05 34.7 3.7 36 106-141 101-136 (227)
217 KOG1202 Animal-type fatty acid 79.2 15 0.00032 39.6 9.6 54 88-141 2163-2219(2376)
218 KOG2541 Palmitoyl protein thio 78.6 10 0.00022 33.8 7.2 35 106-140 92-127 (296)
219 PLN02213 sinapoylglucose-malat 77.8 7.5 0.00016 35.8 6.7 29 252-281 287-316 (319)
220 COG1073 Hydrolases of the alph 76.7 6.7 0.00014 34.7 6.1 62 220-281 229-296 (299)
221 KOG4540 Putative lipase essent 76.2 5.3 0.00012 35.7 4.9 48 90-139 260-307 (425)
222 COG5153 CVT17 Putative lipase 76.2 5.3 0.00012 35.7 4.9 48 90-139 260-307 (425)
223 KOG2385 Uncharacterized conser 76.2 7.6 0.00016 37.7 6.2 56 93-148 432-494 (633)
224 COG2830 Uncharacterized protei 75.8 8.8 0.00019 31.4 5.6 36 106-143 57-92 (214)
225 cd01714 ETF_beta The electron 75.2 8.8 0.00019 32.8 6.1 51 86-137 90-145 (202)
226 KOG2029 Uncharacterized conser 75.2 7.8 0.00017 38.3 6.1 35 106-140 526-571 (697)
227 PLN03016 sinapoylglucose-malat 75.0 5.9 0.00013 38.2 5.4 51 91-141 147-210 (433)
228 PF00135 COesterase: Carboxyle 72.2 7.9 0.00017 38.0 5.8 57 86-142 183-246 (535)
229 PLN02209 serine carboxypeptida 72.2 12 0.00026 36.1 6.7 29 252-281 405-434 (437)
230 PLN02209 serine carboxypeptida 71.1 11 0.00023 36.5 6.1 52 90-141 148-212 (437)
231 PLN03016 sinapoylglucose-malat 68.0 17 0.00037 35.0 6.8 29 252-281 401-430 (433)
232 COG4287 PqaA PhoPQ-activated p 66.7 47 0.001 31.1 8.8 56 223-281 329-386 (507)
233 PF09949 DUF2183: Uncharacteri 66.5 24 0.00051 26.4 5.9 44 93-136 52-97 (100)
234 smart00827 PKS_AT Acyl transfe 63.7 9 0.00019 34.6 3.9 30 96-125 72-101 (298)
235 PF00698 Acyl_transf_1: Acyl t 63.0 6.2 0.00013 36.2 2.7 30 95-124 73-102 (318)
236 PF07519 Tannase: Tannase and 62.5 14 0.0003 36.1 5.1 52 90-141 96-150 (474)
237 PRK13262 ureE urease accessory 62.5 4.4 9.5E-05 35.2 1.5 10 321-330 214-223 (231)
238 cd07225 Pat_PNPLA6_PNPLA7 Pata 62.5 10 0.00022 34.7 4.0 33 96-128 33-65 (306)
239 TIGR03712 acc_sec_asp2 accesso 62.3 1.6E+02 0.0034 28.8 11.8 49 90-140 339-389 (511)
240 TIGR03131 malonate_mdcH malona 61.3 11 0.00023 34.1 3.9 30 96-125 66-95 (295)
241 PRK10279 hypothetical protein; 59.9 12 0.00025 34.2 3.9 32 97-128 24-55 (300)
242 PF06850 PHB_depo_C: PHB de-po 57.7 16 0.00034 31.0 3.9 61 219-281 130-201 (202)
243 PF07217 Het-C: Heterokaryon i 57.2 22 0.00047 35.2 5.3 69 268-345 531-602 (606)
244 cd07198 Patatin Patatin-like p 56.7 16 0.00034 30.1 3.9 34 94-128 15-48 (172)
245 TIGR00128 fabD malonyl CoA-acy 56.6 13 0.00029 33.2 3.7 30 96-125 72-102 (290)
246 cd07227 Pat_Fungal_NTE1 Fungal 56.4 15 0.00033 32.9 3.9 31 97-127 29-59 (269)
247 cd07207 Pat_ExoU_VipD_like Exo 55.3 17 0.00036 30.5 3.9 28 100-127 21-48 (194)
248 COG1752 RssA Predicted esteras 53.9 16 0.00036 33.3 3.8 32 97-128 30-61 (306)
249 cd07210 Pat_hypo_W_succinogene 52.9 21 0.00045 30.9 4.1 33 95-128 18-50 (221)
250 COG0218 Predicted GTPase [Gene 52.9 25 0.00055 29.9 4.4 16 12-27 72-87 (200)
251 KOG2237 Predicted serine prote 52.8 20 0.00043 35.9 4.3 53 88-140 529-583 (712)
252 KOG1282 Serine carboxypeptidas 49.8 27 0.00058 33.8 4.6 31 253-283 418-449 (454)
253 KOG1283 Serine carboxypeptidas 48.5 30 0.00065 31.7 4.4 55 89-143 98-168 (414)
254 cd07209 Pat_hypo_Ecoli_Z1214_l 47.8 25 0.00055 30.2 3.9 31 98-128 18-48 (215)
255 PF00448 SRP54: SRP54-type pro 46.3 33 0.00071 29.1 4.2 47 91-137 100-148 (196)
256 COG4531 ZnuA ABC-type Zn2+ tra 45.9 14 0.0003 32.8 1.9 10 249-258 73-83 (318)
257 cd07228 Pat_NTE_like_bacteria 44.0 35 0.00076 28.1 4.0 33 95-128 18-50 (175)
258 KOG2521 Uncharacterized conser 41.6 3E+02 0.0065 25.7 10.2 82 224-307 226-326 (350)
259 TIGR02816 pfaB_fam PfaB family 41.4 31 0.00067 34.3 3.7 32 96-127 254-286 (538)
260 cd07212 Pat_PNPLA9 Patatin-lik 41.0 40 0.00087 30.9 4.2 34 94-127 16-53 (312)
261 cd07230 Pat_TGL4-5_like Triacy 40.7 17 0.00037 34.9 1.9 32 101-132 96-127 (421)
262 cd07205 Pat_PNPLA6_PNPLA7_NTE1 40.1 44 0.00096 27.4 4.1 27 101-127 23-49 (175)
263 KOG1282 Serine carboxypeptidas 39.8 28 0.0006 33.7 3.1 52 90-141 149-213 (454)
264 KOG4372 Predicted alpha/beta h 39.4 14 0.0003 34.9 0.9 33 92-124 136-168 (405)
265 COG1505 Serine proteases of th 39.2 1.5E+02 0.0033 29.7 7.9 50 89-139 481-533 (648)
266 PRK14974 cell division protein 38.5 1E+02 0.0023 28.6 6.6 46 92-137 240-287 (336)
267 COG2939 Carboxypeptidase C (ca 37.9 35 0.00077 33.2 3.4 35 106-140 198-235 (498)
268 cd07229 Pat_TGL3_like Triacylg 37.4 19 0.00041 34.1 1.6 37 99-135 104-140 (391)
269 COG2272 PnbA Carboxylesterase 36.2 70 0.0015 31.2 5.1 49 93-142 165-218 (491)
270 cd07208 Pat_hypo_Ecoli_yjju_li 35.9 52 0.0011 29.2 4.1 36 94-130 15-51 (266)
271 cd07232 Pat_PLPL Patain-like p 35.6 19 0.00042 34.4 1.3 39 95-134 85-123 (407)
272 KOG1819 FYVE finger-containing 35.0 28 0.0006 33.5 2.2 15 294-308 553-567 (990)
273 TIGR01425 SRP54_euk signal rec 33.6 1.2E+02 0.0026 29.2 6.3 45 92-136 200-246 (429)
274 cd07231 Pat_SDP1-like Sugar-De 33.2 27 0.00058 32.1 1.7 32 101-132 91-122 (323)
275 PRK06731 flhF flagellar biosyn 33.0 2.6E+02 0.0055 25.1 8.0 45 93-137 173-219 (270)
276 COG0646 MetH Methionine syntha 32.4 83 0.0018 28.6 4.6 45 260-306 264-310 (311)
277 KOG1516 Carboxylesterase and r 31.9 78 0.0017 31.3 5.0 57 85-141 169-232 (545)
278 COG3887 Predicted signaling pr 30.8 1.2E+02 0.0027 30.3 5.8 48 90-140 324-377 (655)
279 PF05194 UreE_C: UreE urease a 29.9 17 0.00037 26.3 -0.1 8 225-232 3-10 (87)
280 COG4813 ThuA Trehalose utiliza 29.1 81 0.0018 26.5 3.7 44 220-263 60-105 (261)
281 TIGR00959 ffh signal recogniti 28.8 2E+02 0.0043 27.8 6.9 18 6-23 179-196 (428)
282 cd07224 Pat_like Patatin-like 28.5 81 0.0018 27.5 4.0 33 95-128 17-51 (233)
283 PF05576 Peptidase_S37: PS-10 28.4 60 0.0013 31.0 3.2 55 86-140 111-169 (448)
284 PRK14113 urease accessory prot 27.2 59 0.0013 26.4 2.6 24 273-296 112-135 (152)
285 COG4667 Predicted esterase of 27.1 55 0.0012 29.2 2.5 44 92-136 26-70 (292)
286 PF03002 Somatostatin: Somatos 26.9 23 0.00049 17.4 0.1 7 51-57 8-14 (18)
287 PF09419 PGP_phosphatase: Mito 26.5 2.2E+02 0.0049 23.5 6.0 27 90-116 62-88 (168)
288 PF01012 ETF: Electron transfe 26.3 99 0.0022 25.0 4.0 41 86-127 72-113 (164)
289 COG0541 Ffh Signal recognition 25.6 2.5E+02 0.0053 27.1 6.7 48 90-137 198-247 (451)
290 TIGR00064 ftsY signal recognit 25.5 2.4E+02 0.0051 25.3 6.5 18 7-24 152-169 (272)
291 cd07206 Pat_TGL3-4-5_SDP1 Tria 25.0 81 0.0018 28.7 3.4 30 102-131 93-122 (298)
292 cd07204 Pat_PNPLA_like Patatin 25.0 1E+02 0.0022 27.0 4.0 20 109-128 34-53 (243)
293 PF04794 YdjC: YdjC-like prote 24.9 1E+02 0.0022 27.3 4.0 57 43-117 73-132 (261)
294 COG3113 Predicted NTP binding 24.5 2.5E+02 0.0054 21.0 5.2 79 223-303 10-88 (99)
295 PF05576 Peptidase_S37: PS-10 23.5 40 0.00086 32.1 1.1 55 225-281 353-413 (448)
296 PF06792 UPF0261: Uncharacteri 22.9 4.9E+02 0.011 24.9 8.2 51 87-137 72-126 (403)
297 cd08769 DAP_dppA_2 Peptidase M 22.1 2.3E+02 0.005 25.4 5.6 52 223-280 147-201 (270)
298 cd08770 DAP_dppA_3 Peptidase M 21.9 2.4E+02 0.0052 25.2 5.6 53 223-281 147-201 (263)
299 PRK10867 signal recognition pa 21.1 3.7E+02 0.008 26.0 7.2 18 6-23 180-197 (433)
300 cd07218 Pat_iPLA2 Calcium-inde 20.7 1.3E+02 0.0029 26.4 3.8 36 93-128 16-52 (245)
301 cd08663 DAP_dppA_1 Peptidase M 20.6 2.4E+02 0.0053 25.2 5.4 52 223-280 147-201 (266)
302 PF14117 DUF4287: Domain of un 20.5 24 0.00052 23.8 -0.7 7 337-343 44-50 (61)
No 1
>PLN02965 Probable pheophorbidase
Probab=99.94 E-value=1.3e-25 Score=200.57 Aligned_cols=211 Identities=16% Similarity=0.127 Sum_probs=133.8
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+++||+|+++|+||||.|+.+..
T Consensus 23 ~~~L~~~~~~via~Dl~G~G~S~~~~~----------------------------------------------------- 49 (255)
T PLN02965 23 ATLLDAAGFKSTCVDLTGAGISLTDSN----------------------------------------------------- 49 (255)
T ss_pred HHHHhhCCceEEEecCCcCCCCCCCcc-----------------------------------------------------
Confidence 567877789999999999999976321
Q ss_pred ccccccChHHHHHHHHHHHHHcCC-CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNL-APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL 160 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~-~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 160 (345)
..|+++++++++.++++.++. ++++||||||||.+++.+|.++|++|+++|++++......... .+.......
T Consensus 50 ---~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~ 123 (255)
T PLN02965 50 ---TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSII---SPRLKNVME 123 (255)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCc---cHHHHhhhh
Confidence 135678999999999999987 4999999999999999999999999999999998642111000 000000000
Q ss_pred cc--------------h---hHH-HHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhc-cccccc
Q 019157 161 GS--------------S---FGY-QWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEW-GSSEGI 221 (345)
Q Consensus 161 ~~--------------~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 221 (345)
.. . ... .......+....+..........+.. .....+ . ..... ..+..+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~------~~~~~~~~~~~i 192 (255)
T PLN02965 124 GTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRP-APVRAF----Q------DLDKLPPNPEAE 192 (255)
T ss_pred ccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCC-CCCcch----h------hhhhccchhhcC
Confidence 00 0 000 00110001011111101100000000 000000 0 00000 111234
Q ss_pred CCCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHcCC
Q 019157 222 KGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSSLP 283 (345)
Q Consensus 222 ~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~~ 283 (345)
++|+++|+|++|.-...+.++.+++.+|+++++++ ++||++++|+|++|++.|.+|++++.
T Consensus 193 -~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 193 -KVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred -CCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 69999999994443344889999999999999999 89999999999999999999998753
No 2
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=7.9e-26 Score=206.10 Aligned_cols=222 Identities=18% Similarity=0.204 Sum_probs=142.6
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++ ++||++|+||||.|+.+..
T Consensus 47 ~~~L~~~-~~via~D~~G~G~S~~~~~----------------------------------------------------- 72 (295)
T PRK03592 47 IPHLAGL-GRCLAPDLIGMGASDKPDI----------------------------------------------------- 72 (295)
T ss_pred HHHHhhC-CEEEEEcCCCCCCCCCCCC-----------------------------------------------------
Confidence 4678888 6999999999999987422
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCC-chhhhcchhhHHHhhh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPA-LPLFALNLPLIRDFVL 160 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~-~~~~~~~~~~~~~~~~ 160 (345)
.|+.+++++++.++++++++++++||||||||.+++.+|.++|++|+++|++++...+. ...+..........+.
T Consensus 73 ----~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (295)
T PRK03592 73 ----DYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALR 148 (295)
T ss_pred ----CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999999999999853221 1100000000001010
Q ss_pred c----c------hhHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccch-------hhc-ccccccC
Q 019157 161 G----S------SFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDM-------AEW-GSSEGIK 222 (345)
Q Consensus 161 ~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~ 222 (345)
. . ..+....+.......++.++...+...+...........+.+.+...... ..+ ..+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i- 227 (295)
T PRK03592 149 SPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATS- 227 (295)
T ss_pred CcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccC-
Confidence 0 0 00111111111112234444555554444433333333333332111000 001 112334
Q ss_pred CCCEEEEEecCCCCcch--HhH-HHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHcCCc
Q 019157 223 GIPMQILWSSVWSKEWS--EEG-SRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSSLPK 284 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~--~~~-~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~~~ 284 (345)
++|+|+|+|+ .|.++ ... +.+.+.+++++++++ ++||++++|+|+++++.|.+|+++...
T Consensus 228 ~~P~lii~G~--~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 228 DVPKLLINAE--PGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CCCeEEEecc--CCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 6899999999 56554 333 444556788999999 899999999999999999999987653
No 3
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.94 E-value=6.3e-26 Score=200.57 Aligned_cols=221 Identities=20% Similarity=0.179 Sum_probs=154.8
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+.+||||+|+|+||+|.|+.|...
T Consensus 64 ~~~la~~~~rviA~DlrGyG~Sd~P~~~---------------------------------------------------- 91 (322)
T KOG4178|consen 64 IPGLASRGYRVIAPDLRGYGFSDAPPHI---------------------------------------------------- 91 (322)
T ss_pred hhhhhhcceEEEecCCCCCCCCCCCCCc----------------------------------------------------
Confidence 5678999999999999999999997542
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch---------------
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP--------------- 146 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~--------------- 146 (345)
..|++..++.++..++++|+.++++++||+||++||+.+|..+|++|+++|+++.+......
T Consensus 92 ---~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y 168 (322)
T KOG4178|consen 92 ---SEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYY 168 (322)
T ss_pred ---ceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccce
Confidence 36888999999999999999999999999999999999999999999999999987541000
Q ss_pred hhhcchhhHHHhhhc--c-hhHHHHHHHHhhh-------------cCCChhhHHHHHHHhccchhHHHHHHHHHhhcccc
Q 019157 147 LFALNLPLIRDFVLG--S-SFGYQWLIRFCCM-------------KKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSF 210 (345)
Q Consensus 147 ~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (345)
...++.+...+.... . ......+...... ..++.++++.+...+... +....+++++++....
T Consensus 169 ~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~-g~~gplNyyrn~~r~w 247 (322)
T KOG4178|consen 169 ICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQID-GFTGPLNYYRNFRRNW 247 (322)
T ss_pred eEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccc-cccccchhhHHHhhCc
Confidence 000112222221111 0 0111111110000 013355666666666433 3666777888777654
Q ss_pred chhhcccccccCCCCEEEEEecCCCCcch---HhHHHHHhhCCCC-eEEEE-cCCccccccCHHHHHHHHHHHHHcC
Q 019157 211 DMAEWGSSEGIKGIPMQILWSSVWSKEWS---EEGSRVADALPQA-KFVGH-SGGRWPQVDSADELAKHIADFVSSL 282 (345)
Q Consensus 211 ~~~~~~~~~~~~~~PvliI~G~~D~D~~~---~~~~~~~~~~~~~-~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~ 282 (345)
. ........+ ++|+++|+|+ .|.+. ..+..+.+.+|+. +.+++ ++|||++.|+|++|+++|.+|+++.
T Consensus 248 ~-a~~~~~~~i-~iPv~fi~G~--~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 248 E-AAPWALAKI-TIPVLFIWGD--LDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred h-hcccccccc-ccceEEEEec--CcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 3 112222344 5899999999 66555 3577788888887 55566 8999999999999999999999874
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=1.2e-25 Score=205.70 Aligned_cols=222 Identities=20% Similarity=0.197 Sum_probs=135.8
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+++||+|+++|+||||.|+++...
T Consensus 66 ~~~L~~~gy~vi~~Dl~G~G~S~~~~~~---------------------------------------------------- 93 (302)
T PRK00870 66 IPILAAAGHRVIAPDLIGFGRSDKPTRR---------------------------------------------------- 93 (302)
T ss_pred HHHHHhCCCEEEEECCCCCCCCCCCCCc----------------------------------------------------
Confidence 5678777899999999999999764210
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhc
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 161 (345)
..|+++++++++.++++++++++++||||||||.+++.+|.++|++|+++|++++..+...................
T Consensus 94 ---~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (302)
T PRK00870 94 ---EDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQY 170 (302)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhccccc
Confidence 14667899999999999999999999999999999999999999999999999975322111000000000000000
Q ss_pred ch-hHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhc--------cccchhhcccccccCCCCEEEEEec
Q 019157 162 SS-FGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLN--------NSFDMAEWGSSEGIKGIPMQILWSS 232 (345)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~PvliI~G~ 232 (345)
.. ......+........+......+...+.... ..........+. .......+..+.++ ++|+++|+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~ 248 (302)
T PRK00870 171 SPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDES-YKAGARAFPLLVPTSPDDPAVAANRAAWAVLERW-DKPFLTAFSD 248 (302)
T ss_pred CchhhHHHHhhccccccCCHHHHHHhhcccCChh-hhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcC-CCceEEEecC
Confidence 00 0111111111111122222222211111100 000000010000 00011122333455 5999999999
Q ss_pred CCCCcch-HhHHHHHhhCCCCe---EEEE-cCCccccccCHHHHHHHHHHHHHcC
Q 019157 233 VWSKEWS-EEGSRVADALPQAK---FVGH-SGGRWPQVDSADELAKHIADFVSSL 282 (345)
Q Consensus 233 ~D~D~~~-~~~~~~~~~~~~~~---~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~ 282 (345)
.|... ...+.+.+.+++++ ++++ ++||++++|+|++|++.|.+|++..
T Consensus 249 --~D~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 249 --SDPITGGGDAILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred --CCCcccCchHHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 55554 23378999999876 7788 8899999999999999999999864
No 5
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=7.4e-25 Score=199.59 Aligned_cols=225 Identities=16% Similarity=0.142 Sum_probs=137.9
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+++ |+||++|+||||.|+.+..... .
T Consensus 49 ~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~----------~--------------------------------------- 78 (294)
T PLN02824 49 TPVLAKS-HRVYAIDLLGYGYSDKPNPRSA----------P--------------------------------------- 78 (294)
T ss_pred HHHHHhC-CeEEEEcCCCCCCCCCCccccc----------c---------------------------------------
Confidence 5678887 8999999999999987421000 0
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCC-chhh-hcchhh---HH
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPA-LPLF-ALNLPL---IR 156 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~-~~~~-~~~~~~---~~ 156 (345)
....|+++++++++.++++.+++++++||||||||.+++.+|.++|++|+++|++++..... .... ....+. +.
T Consensus 79 -~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PLN02824 79 -PNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ 157 (294)
T ss_pred -ccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHH
Confidence 00246779999999999999999999999999999999999999999999999999864211 0000 000111 01
Q ss_pred Hhhhc------------chhHHHHHHHHhhh--cCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccC
Q 019157 157 DFVLG------------SSFGYQWLIRFCCM--KKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIK 222 (345)
Q Consensus 157 ~~~~~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (345)
..+.. .......++..... ..+.......+............+..... +.. .......+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~l~~i- 233 (294)
T PLN02824 158 NLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFIS-YSG--GPLPEELLPAV- 233 (294)
T ss_pred HHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhc-ccc--ccchHHHHhhc-
Confidence 10000 00001111111110 11122122221111111111111111111 010 00111223455
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
++|+++|+|+.|.....+.++.+.+..++++++++ ++||++++|+|++|++.|.+|+++
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 59999999995444444778888888888999999 899999999999999999999975
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.93 E-value=3e-25 Score=200.37 Aligned_cols=216 Identities=15% Similarity=0.117 Sum_probs=136.8
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.+. |+||++|+||||.|+.+..
T Consensus 45 ~~~L~~~-~~vi~~Dl~G~G~S~~~~~----------------------------------------------------- 70 (276)
T TIGR02240 45 IEALDPD-LEVIAFDVPGVGGSSTPRH----------------------------------------------------- 70 (276)
T ss_pred HHHhccC-ceEEEECCCCCCCCCCCCC-----------------------------------------------------
Confidence 4567665 9999999999999986421
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhc
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 161 (345)
.++++++++++.++++.+++++++||||||||.+++.+|.++|++|+++|++++........ ..+........
T Consensus 71 ----~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~ 143 (276)
T TIGR02240 71 ----PYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVP---GKPKVLMMMAS 143 (276)
T ss_pred ----cCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCC---CchhHHHHhcC
Confidence 45668999999999999999999999999999999999999999999999999875321100 00000000000
Q ss_pred chhHHH-----HHHHHhhhcC--CChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCC
Q 019157 162 SSFGYQ-----WLIRFCCMKK--VGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVW 234 (345)
Q Consensus 162 ~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D 234 (345)
...... .......... ........+.................... .......+..+ ++|+++|+|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i-~~P~lii~G~-- 216 (276)
T TIGR02240 144 PRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGL----GWTSIHWLHKI-QQPTLVLAGD-- 216 (276)
T ss_pred chhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHc----CCchhhHhhcC-CCCEEEEEeC--
Confidence 000000 0000000000 01111111111111111111111111111 11111223455 5899999999
Q ss_pred CCcch--HhHHHHHhhCCCCeEEEEcCCccccccCHHHHHHHHHHHHHcCCcc
Q 019157 235 SKEWS--EEGSRVADALPQAKFVGHSGGRWPQVDSADELAKHIADFVSSLPKT 285 (345)
Q Consensus 235 ~D~~~--~~~~~~~~~~~~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~~~~~~ 285 (345)
.|.++ +.++.+.+.+|+++++++++||++++|+|+++++.|.+|+.+..+.
T Consensus 217 ~D~~v~~~~~~~l~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 217 DDPIIPLINMRLLAWRIPNAELHIIDDGHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred CCCcCCHHHHHHHHHhCCCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhhhh
Confidence 56555 7788999999999999997799999999999999999999976543
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=1.2e-24 Score=197.48 Aligned_cols=219 Identities=22% Similarity=0.264 Sum_probs=134.5
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.+. |+||++|+||||.|+.+..
T Consensus 54 ~~~l~~~-~~vi~~D~~G~G~S~~~~~----------------------------------------------------- 79 (286)
T PRK03204 54 IVALRDR-FRCVAPDYLGFGLSERPSG----------------------------------------------------- 79 (286)
T ss_pred HHHHhCC-cEEEEECCCCCCCCCCCCc-----------------------------------------------------
Confidence 4567665 9999999999999987422
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch--hhhcch---h-hH
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP--LFALNL---P-LI 155 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~--~~~~~~---~-~~ 155 (345)
..|+.+++++++.+++++++.++++++||||||.+++.+|..+|++|+++|++++....... ...+.. + ..
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (286)
T PRK03204 80 ---FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPV 156 (286)
T ss_pred ---cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccc
Confidence 24566899999999999999999999999999999999999999999999998875421100 000000 0 00
Q ss_pred HHhhhcchhHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccc-hhhc-ccccc-cCCCCEEEEEec
Q 019157 156 RDFVLGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFD-MAEW-GSSEG-IKGIPMQILWSS 232 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~-~~~~PvliI~G~ 232 (345)
...+.........++........+......+......+............+..... .... ..... ..++|+++|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~ 236 (286)
T PRK03204 157 QYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGM 236 (286)
T ss_pred hhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecC
Confidence 00000001111222111111223333333332222222111111111111110000 0000 00011 126999999999
Q ss_pred CCCCcch---HhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHH
Q 019157 233 VWSKEWS---EEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFV 279 (345)
Q Consensus 233 ~D~D~~~---~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl 279 (345)
.|... ..++.+++.+|+++++++ ++||++++|+|++|++.|.+||
T Consensus 237 --~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 237 --KDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred --CCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 56443 457889999999999999 8999999999999999999997
No 8
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=8.8e-24 Score=197.84 Aligned_cols=219 Identities=19% Similarity=0.225 Sum_probs=135.4
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.+ +|+||++|+||||.|+.+..
T Consensus 108 ~~~L~~-~~~via~Dl~G~G~S~~~~~----------------------------------------------------- 133 (360)
T PLN02679 108 IGVLAK-NYTVYAIDLLGFGASDKPPG----------------------------------------------------- 133 (360)
T ss_pred HHHHhc-CCEEEEECCCCCCCCCCCCC-----------------------------------------------------
Confidence 456776 59999999999999987422
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHH-CCCccceEEEEeCCCCCCc----hhhhcc--hhh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE-NPGSVKSLTLLDTGIKPAL----PLFALN--LPL 154 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~-~p~~v~~lvli~~~~~~~~----~~~~~~--~~~ 154 (345)
..|+++++++++.++++.+++++++||||||||.+++.+|.+ +|++|+++|++++...... ..+... .+.
T Consensus 134 ---~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~ 210 (360)
T PLN02679 134 ---FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPL 210 (360)
T ss_pred ---ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcch
Confidence 246678999999999999999999999999999999999874 7999999999998642110 111100 000
Q ss_pred H--HHhhhc-------------chhHHHHHHHHhhh--cCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhccc
Q 019157 155 I--RDFVLG-------------SSFGYQWLIRFCCM--KKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGS 217 (345)
Q Consensus 155 ~--~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (345)
. ...+.. ....+..++..... ..++......+............+...... .. .......
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ 287 (360)
T PLN02679 211 LWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTG-PP--GPNPIKL 287 (360)
T ss_pred HHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhc-CC--CCCHHHH
Confidence 0 000000 00111111111111 112222222222222222222222222111 00 0111122
Q ss_pred ccccCCCCEEEEEecCCCCcch--H-----hHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHcCC
Q 019157 218 SEGIKGIPMQILWSSVWSKEWS--E-----EGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSSLP 283 (345)
Q Consensus 218 ~~~~~~~PvliI~G~~D~D~~~--~-----~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~~ 283 (345)
+..+ ++|+|+|+|+ +|.++ + ....+.+.+|+++++++ ++||++++|+|++|++.|.+||.++.
T Consensus 288 l~~i-~~PtLii~G~--~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 288 IPRI-SLPILVLWGD--QDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred hhhc-CCCEEEEEeC--CCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 3455 5999999999 55543 3 23457777899999999 89999999999999999999998754
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.92 E-value=1.4e-23 Score=189.72 Aligned_cols=189 Identities=13% Similarity=0.160 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcc---hhhHHHhhhc-chhHH
Q 019157 91 EVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALN---LPLIRDFVLG-SSFGY 166 (345)
Q Consensus 91 ~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~ 166 (345)
.+++++.++++.+++++++++||||||.+++.+|.++|++|+++|++++............ ...+...... ....+
T Consensus 86 ~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
T TIGR03343 86 VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETL 165 (282)
T ss_pred hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHH
Confidence 4678899999999999999999999999999999999999999999997632110000000 0000010000 01111
Q ss_pred HHHHHHhhh-c-CCChhhHHHHHH-HhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHH
Q 019157 167 QWLIRFCCM-K-KVGSFDVEDNRV-LLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGS 243 (345)
Q Consensus 167 ~~~~~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~ 243 (345)
..++..... . ..+......... ....+.....+..... ............+..+ ++|+++|+|+.|.-...+.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~i-~~Pvlli~G~~D~~v~~~~~~ 243 (282)
T TIGR03343 166 KQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQ-KAPLSTWDVTARLGEI-KAKTLVTWGRDDRFVPLDHGL 243 (282)
T ss_pred HHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhcc-ccccccchHHHHHhhC-CCCEEEEEccCCCcCCchhHH
Confidence 111111110 0 111111111111 1111111111110000 0000011111223444 589999999943333347888
Q ss_pred HHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 244 RVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 244 ~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
.+++.+|+++++++ ++||+++.|+|++|++.|.+||++
T Consensus 244 ~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 244 KLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred HHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 99999999999999 899999999999999999999963
No 10
>PLN02578 hydrolase
Probab=99.92 E-value=2.7e-23 Score=194.23 Aligned_cols=218 Identities=16% Similarity=0.221 Sum_probs=136.0
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++ |+|+++|+||||.|+++..
T Consensus 106 ~~~l~~~-~~v~~~D~~G~G~S~~~~~----------------------------------------------------- 131 (354)
T PLN02578 106 IPELAKK-YKVYALDLLGFGWSDKALI----------------------------------------------------- 131 (354)
T ss_pred HHHHhcC-CEEEEECCCCCCCCCCccc-----------------------------------------------------
Confidence 4667765 9999999999999987422
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhh-hc-----chhhH
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLF-AL-----NLPLI 155 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~-~~-----~~~~~ 155 (345)
.|+.+.+++++.++++.+..++++++||||||.+++.+|.++|++|+++|++++.+....... .. .....
T Consensus 132 ----~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~ 207 (354)
T PLN02578 132 ----EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVL 207 (354)
T ss_pred ----ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchh
Confidence 466788999999999999989999999999999999999999999999999987642111100 00 00000
Q ss_pred HHhhh-c------------------chhHHHHHHHHhhhc--CCChhhHHHHHHHhccchhHHHHHHHHHhhcccc-chh
Q 019157 156 RDFVL-G------------------SSFGYQWLIRFCCMK--KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSF-DMA 213 (345)
Q Consensus 156 ~~~~~-~------------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 213 (345)
..... . .....+......... ..+....+..............+...+..+.... ...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (354)
T PLN02578 208 TRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYT 287 (354)
T ss_pred hHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCC
Confidence 00000 0 000000111100100 0111111111111112222222233222211110 111
Q ss_pred hcccccccCCCCEEEEEecCCCCcch--HhHHHHHhhCCCCeEEEEcCCccccccCHHHHHHHHHHHHH
Q 019157 214 EWGSSEGIKGIPMQILWSSVWSKEWS--EEGSRVADALPQAKFVGHSGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 214 ~~~~~~~~~~~PvliI~G~~D~D~~~--~~~~~~~~~~~~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
....+..+ ++|+++|+|+ .|.++ +.++.+++.+|+++++++++||++++|+|+++++.|.+|++
T Consensus 288 ~~~~l~~i-~~PvLiI~G~--~D~~v~~~~~~~l~~~~p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 288 LDSLLSKL-SCPLLLLWGD--LDPWVGPAKAEKIKAFYPDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHHhhcC-CCCEEEEEeC--CCCCCCHHHHHHHHHhCCCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 11223444 6999999999 55544 77888999999999998899999999999999999999986
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.92 E-value=1.8e-23 Score=186.12 Aligned_cols=208 Identities=13% Similarity=0.196 Sum_probs=131.2
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
+..|.+. |+||++|+||||.|+.+.
T Consensus 36 ~~~l~~~-~~vi~~D~~G~G~s~~~~------------------------------------------------------ 60 (255)
T PRK10673 36 ARDLVND-HDIIQVDMRNHGLSPRDP------------------------------------------------------ 60 (255)
T ss_pred HHHHhhC-CeEEEECCCCCCCCCCCC------------------------------------------------------
Confidence 3456654 999999999999997631
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcc-hhhHHHhhh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALN-LPLIRDFVL 160 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~-~~~~~~~~~ 160 (345)
.++++++++++.++++.++.++++||||||||.+++.+|.++|++|+++|++++.+......+... ...+.....
T Consensus 61 ----~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
T PRK10673 61 ----VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSE 136 (255)
T ss_pred ----CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhh
Confidence 356688999999999999999999999999999999999999999999999986542211100000 000000000
Q ss_pred -c--chhHHHHHHHHhhhcCCChhhHHHHHH-Hhccch---hHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecC
Q 019157 161 -G--SSFGYQWLIRFCCMKKVGSFDVEDNRV-LLKGRD---RCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSV 233 (345)
Q Consensus 161 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~ 233 (345)
. ........+. ..........+.. .+.... ........+... ..+..+..+ ++|+|+|+|+
T Consensus 137 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~P~l~i~G~- 204 (255)
T PRK10673 137 AGATTRQQAAAIMR----QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHI------VGWEKIPAW-PHPALFIRGG- 204 (255)
T ss_pred cccccHHHHHHHHH----HhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHH------hCCcccCCC-CCCeEEEECC-
Confidence 0 0000000000 0111111111111 111000 001111111111 111222334 5899999999
Q ss_pred CCCcch--HhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 234 WSKEWS--EEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 234 D~D~~~--~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
.|.++ +..+.+++.+|+++++++ ++||++++++|+++++.|.+||.+
T Consensus 205 -~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 205 -NSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred -CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 55544 788889999999999999 899999999999999999999975
No 12
>PRK06489 hypothetical protein; Provisional
Probab=99.91 E-value=3.9e-23 Score=193.65 Aligned_cols=194 Identities=11% Similarity=0.041 Sum_probs=110.9
Q ss_pred ccChHHHHHHHHHH-HHHcCCCcEE-EEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch-hhhcc---hhhHHHhh
Q 019157 86 ELGSDEVGRVLGQV-IDTFNLAPVH-LVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LFALN---LPLIRDFV 159 (345)
Q Consensus 86 ~~~~~~~~~~l~~l-l~~l~~~~~~-lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~-~~~~~---~~~~~~~~ 159 (345)
.|+++++++++.++ ++++++++++ ||||||||.+++.+|.++|++|+++|++++....... .+... ...+....
T Consensus 132 ~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~ 211 (360)
T PRK06489 132 RYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDP 211 (360)
T ss_pred cccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCC
Confidence 36778999888775 4889999985 8999999999999999999999999999886422111 11000 00000000
Q ss_pred h----c---chhHHHHHHHHh----------h-hcCCChhhHHHHHHHhc---cchhHHHHHHHHHhhccccchhhcccc
Q 019157 160 L----G---SSFGYQWLIRFC----------C-MKKVGSFDVEDNRVLLK---GRDRCRAVSEMGRKLNNSFDMAEWGSS 218 (345)
Q Consensus 160 ~----~---~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (345)
. . ............ . ...........+..... .......+........ .......+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~~L 288 (360)
T PRK06489 212 AWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSR---DYNPSPDL 288 (360)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhh---ccChHHHH
Confidence 0 0 000111111000 0 00111111111111000 0001111111111111 11112233
Q ss_pred cccCCCCEEEEEecCCCCcchHhH--HHHHhhCCCCeEEEE-cC----CccccccCHHHHHHHHHHHHHcCCc
Q 019157 219 EGIKGIPMQILWSSVWSKEWSEEG--SRVADALPQAKFVGH-SG----GRWPQVDSADELAKHIADFVSSLPK 284 (345)
Q Consensus 219 ~~~~~~PvliI~G~~D~D~~~~~~--~~~~~~~~~~~~~~i-~~----GH~~~~e~pe~v~~~I~~fl~~~~~ 284 (345)
.++ ++|+|+|+|+.|.-.+.+.+ +.+++.+|+++++++ ++ ||+++ ++|++|++.|.+||..+.+
T Consensus 289 ~~I-~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 289 EKI-KAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred HhC-CCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhccc
Confidence 555 59999999994333333443 789999999999999 75 99997 8999999999999998764
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.91 E-value=2.8e-23 Score=185.39 Aligned_cols=213 Identities=11% Similarity=0.064 Sum_probs=125.1
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++ |+|+++|+||||.|+.+.
T Consensus 33 ~~~L~~~-~~vi~~Dl~G~G~S~~~~------------------------------------------------------ 57 (256)
T PRK10349 33 DEELSSH-FTLHLVDLPGFGRSRGFG------------------------------------------------------ 57 (256)
T ss_pred HHHHhcC-CEEEEecCCCCCCCCCCC------------------------------------------------------
Confidence 4567776 999999999999997521
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCC-chhhhc-chhhHHHh-
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPA-LPLFAL-NLPLIRDF- 158 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~-~~~~~~-~~~~~~~~- 158 (345)
.++++++++++. .+.+++++||||||||.+++.+|.++|++|+++|++++.+... ...+.. ........
T Consensus 58 ----~~~~~~~~~~l~----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 129 (256)
T PRK10349 58 ----ALSLADMAEAVL----QQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQ 129 (256)
T ss_pred ----CCCHHHHHHHHH----hcCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHH
Confidence 234456666554 3567899999999999999999999999999999998853211 000100 00001110
Q ss_pred --hh-cchhHHHHHHHHhhh-cCCChhhHHHHHHHh-ccc-hhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEec
Q 019157 159 --VL-GSSFGYQWLIRFCCM-KKVGSFDVEDNRVLL-KGR-DRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSS 232 (345)
Q Consensus 159 --~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~ 232 (345)
+. ........++..... ..........+.... ... ............+.. . .....+..+ ++|+++|+|+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~l~~i-~~P~lii~G~ 205 (256)
T PRK10349 130 QQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKT-V--DLRQPLQNV-SMPFLRLYGY 205 (256)
T ss_pred HHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHh-C--ccHHHHhhc-CCCeEEEecC
Confidence 00 011112222211111 110011111111111 100 001111111111110 1 111223444 5999999999
Q ss_pred CCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 233 VWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 233 ~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
.|.-.+.+.++.+.+.+++++++++ ++||++++|+|++|++.|.+|-++
T Consensus 206 ~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 206 LDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 4433344778899999999999999 899999999999999999999654
No 14
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.91 E-value=3.5e-23 Score=178.90 Aligned_cols=207 Identities=23% Similarity=0.276 Sum_probs=131.5
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+ +||+|+++|+||+|.|+.+.. +
T Consensus 18 ~~~l~-~~~~v~~~d~~G~G~s~~~~~----------------~------------------------------------ 44 (228)
T PF12697_consen 18 AEALA-RGYRVIAFDLPGHGRSDPPPD----------------Y------------------------------------ 44 (228)
T ss_dssp HHHHH-TTSEEEEEECTTSTTSSSHSS----------------G------------------------------------
T ss_pred HHHHh-CCCEEEEEecCCccccccccc----------------c------------------------------------
Confidence 45674 689999999999999987421 0
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhh-hcchhhHHHhhh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLF-ALNLPLIRDFVL 160 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~-~~~~~~~~~~~~ 160 (345)
..++++++++++.++++.++.++++|+|||+||.+++.++.++|++|+++|++++......... ....+.+.....
T Consensus 45 ---~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (228)
T PF12697_consen 45 ---SPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLA 121 (228)
T ss_dssp ---SGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHH
T ss_pred ---CCcchhhhhhhhhhcccccccccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhh
Confidence 1356689999999999999999999999999999999999999999999999998864211100 001111221111
Q ss_pred cchhHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcch-
Q 019157 161 GSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWS- 239 (345)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~- 239 (345)
........+.................... ....+...++.. .........+..+ ++|+++|+|+ .|.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~-~~pvl~i~g~--~D~~~~ 191 (228)
T PF12697_consen 122 WRSRSLRRLASRFFYRWFDGDEPEDLIRS-----SRRALAEYLRSN--LWQADLSEALPRI-KVPVLVIHGE--DDPIVP 191 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHH-----HHHHHHHHHHHH--HHHHHHHHHHHGS-SSEEEEEEET--TSSSSH
T ss_pred ccccccccccccccccccccccccccccc-----cccccccccccc--ccccccccccccc-CCCeEEeecC--CCCCCC
Confidence 11111111111111111122222222211 122222222210 0011111222444 5899999999 55554
Q ss_pred -HhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHH
Q 019157 240 -EEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKH 274 (345)
Q Consensus 240 -~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~ 274 (345)
+..+.+.+.+++++++++ ++||++++|+|++|+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 192 PESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 788899999999999999 79999999999999874
No 15
>PRK07581 hypothetical protein; Validated
Probab=99.91 E-value=5.3e-23 Score=191.23 Aligned_cols=184 Identities=12% Similarity=-0.013 Sum_probs=104.3
Q ss_pred HHHHHcCCCc-EEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhh-----------------
Q 019157 98 QVIDTFNLAP-VHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFV----------------- 159 (345)
Q Consensus 98 ~ll~~l~~~~-~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~----------------- 159 (345)
.+++++++++ ++||||||||++++.+|.++|++|++||++++........... .......+
T Consensus 115 ~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~ 193 (339)
T PRK07581 115 LLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVF-LEGLKAALTADPAFNGGWYAEPPER 193 (339)
T ss_pred HHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHH-HHHHHHHHHhCCCCCCCCCCCcHHH
Confidence 3778899999 5899999999999999999999999999998765321100000 00000000
Q ss_pred --hcc-hhH-----HHHHHHHhhhcCCC----hhhHHHHHHHh-c--cchhHHHHHHHHHhhc--ccc--chhhcccccc
Q 019157 160 --LGS-SFG-----YQWLIRFCCMKKVG----SFDVEDNRVLL-K--GRDRCRAVSEMGRKLN--NSF--DMAEWGSSEG 220 (345)
Q Consensus 160 --~~~-~~~-----~~~~~~~~~~~~~~----~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~ 220 (345)
... ... ...+++........ ......+.... . ........+..+.... ... ....+..+.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~ 273 (339)
T PRK07581 194 GLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGS 273 (339)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhc
Confidence 000 000 00001100000010 11111111111 1 1111111111111110 000 0112233345
Q ss_pred cCCCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-c-CCccccccCHHHHHHHHHHHHHcCC
Q 019157 221 IKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-S-GGRWPQVDSADELAKHIADFVSSLP 283 (345)
Q Consensus 221 ~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~-~GH~~~~e~pe~v~~~I~~fl~~~~ 283 (345)
+ ++|+|+|+|+.|.-...+.++.+++.+|+++++++ + +||++++++|++++..|.+||+++-
T Consensus 274 I-~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 274 I-TAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred C-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 5 59999999994444444778899999999999999 6 8999999999999999999998753
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.91 E-value=6.8e-23 Score=191.89 Aligned_cols=221 Identities=19% Similarity=0.290 Sum_probs=136.2
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|++ +|+||++|+||||.|+.+....
T Consensus 147 ~~~L~~-~~~Via~DlpG~G~S~~p~~~~--------------------------------------------------- 174 (383)
T PLN03084 147 LPVLSK-NYHAIAFDWLGFGFSDKPQPGY--------------------------------------------------- 174 (383)
T ss_pred HHHHhc-CCEEEEECCCCCCCCCCCcccc---------------------------------------------------
Confidence 466776 5999999999999998753200
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHH----
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRD---- 157 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~---- 157 (345)
...|+++++++++.++++++++++++|||||+||.+++.+|.++|++|+++|+++++..............+..
T Consensus 175 --~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~ 252 (383)
T PLN03084 175 --GFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLG 252 (383)
T ss_pred --cccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhh
Confidence 02577899999999999999999999999999999999999999999999999998743211000000000000
Q ss_pred -hhhcchh-HHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHH-HHHHhhccccc--hhhccc---ccccCCCCEEEE
Q 019157 158 -FVLGSSF-GYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVS-EMGRKLNNSFD--MAEWGS---SEGIKGIPMQIL 229 (345)
Q Consensus 158 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~---~~~~~~~PvliI 229 (345)
....... .....+........+.+....+...+.......... ...+.+..... ...... ...+ ++|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i-~vPvLiI 331 (383)
T PLN03084 253 EIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNW-KTPITVC 331 (383)
T ss_pred hhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccC-CCCEEEE
Confidence 0000000 000001000011123333334443333322111111 12222211100 000000 0223 6899999
Q ss_pred EecCCCCcch--HhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHH
Q 019157 230 WSSVWSKEWS--EEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 230 ~G~~D~D~~~--~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
+|+ .|.++ +..+.+++. ++++++++ ++||++++|+|+++++.|.+||+
T Consensus 332 ~G~--~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 332 WGL--RDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred eeC--CCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 999 56555 667777776 58899999 89999999999999999999986
No 17
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.90 E-value=1.5e-22 Score=193.46 Aligned_cols=216 Identities=16% Similarity=0.098 Sum_probs=128.5
Q ss_pred cCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcccccccc
Q 019157 8 KKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVKVIEL 87 (345)
Q Consensus 8 ~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (345)
++|+||++|+||||.|+.+.. ..|
T Consensus 231 ~~yrVia~Dl~G~G~S~~p~~--------------------------------------------------------~~y 254 (481)
T PLN03087 231 STYRLFAVDLLGFGRSPKPAD--------------------------------------------------------SLY 254 (481)
T ss_pred CCCEEEEECCCCCCCCcCCCC--------------------------------------------------------CcC
Confidence 579999999999999987421 135
Q ss_pred ChHHHHHHHH-HHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhh------
Q 019157 88 GSDEVGRVLG-QVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL------ 160 (345)
Q Consensus 88 ~~~~~~~~l~-~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~------ 160 (345)
+++++++++. .+++.+++++++|+||||||.+++.+|.++|++|+++|+++++......... ..........
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQ-ATQYVMRKVAPRRVWP 333 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchh-HHHHHHHHhcccccCC
Confidence 6788999994 8999999999999999999999999999999999999999986432111000 0000000000
Q ss_pred --cchhHHHHHHHHhhhc-----CCChhhHHHHHHHhccchhHHHH------------HHHHHhhccccc--h-hhcc-c
Q 019157 161 --GSSFGYQWLIRFCCMK-----KVGSFDVEDNRVLLKGRDRCRAV------------SEMGRKLNNSFD--M-AEWG-S 217 (345)
Q Consensus 161 --~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~--~-~~~~-~ 217 (345)
........++...... ....................... ...+..+..... . .... .
T Consensus 334 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l 413 (481)
T PLN03087 334 PIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHV 413 (481)
T ss_pred ccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHH
Confidence 0000000000000000 00000011100000000000000 000000000000 0 0001 1
Q ss_pred ccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccc-cCHHHHHHHHHHHHHc
Q 019157 218 SEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQV-DSADELAKHIADFVSS 281 (345)
Q Consensus 218 ~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~-e~pe~v~~~I~~fl~~ 281 (345)
...+ ++|+|+|+|++|.-.+.+.++.+++.+|+++++++ ++||++++ |+|+++++.|.+|+..
T Consensus 414 ~~~I-~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 414 RDQL-KCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHhC-CCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 1234 59999999995444444888999999999999999 89999885 9999999999999865
No 18
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.90 E-value=2.3e-22 Score=177.62 Aligned_cols=186 Identities=11% Similarity=0.024 Sum_probs=105.4
Q ss_pred ChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCc-cceEEEEeCCCCCCchh-hhc---chhhHHHhhhc-
Q 019157 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS-VKSLTLLDTGIKPALPL-FAL---NLPLIRDFVLG- 161 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~-v~~lvli~~~~~~~~~~-~~~---~~~~~~~~~~~- 161 (345)
+++++++++.++++.++++++++|||||||.+++.+|.++|+. |+++|++++........ ... ........+..
T Consensus 48 ~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (242)
T PRK11126 48 GFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQE 127 (242)
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccC
Confidence 4478999999999999999999999999999999999999764 99999998764211110 000 00000000000
Q ss_pred -chhHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchH
Q 019157 162 -SSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSE 240 (345)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~ 240 (345)
....+..++...............+........ .......+...........+..+.++ ++|+++|+|+ +|..+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~--~D~~~~ 203 (242)
T PRK11126 128 PLEQVLADWYQQPVFASLNAEQRQQLVAKRSNNN-GAAVAAMLEATSLAKQPDLRPALQAL-TFPFYYLCGE--RDSKFQ 203 (242)
T ss_pred cHHHHHHHHHhcchhhccCccHHHHHHHhcccCC-HHHHHHHHHhcCcccCCcHHHHhhcc-CCCeEEEEeC--CcchHH
Confidence 001111111100111122222222222111111 11111222211100011112233455 5999999999 565442
Q ss_pred hHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 241 EGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
.+++. ++++++++ ++||++++|+|+++++.|.+|+.+
T Consensus 204 ---~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 204 ---ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred ---HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 22233 37899999 899999999999999999999975
No 19
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.90 E-value=1.1e-22 Score=180.55 Aligned_cols=224 Identities=15% Similarity=0.103 Sum_probs=136.3
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|++. ++|+++|+||+|+|++|..... +
T Consensus 110 f~~La~~-~~vyaiDllG~G~SSRP~F~~d-------------~------------------------------------ 139 (365)
T KOG4409|consen 110 FDDLAKI-RNVYAIDLLGFGRSSRPKFSID-------------P------------------------------------ 139 (365)
T ss_pred hhhhhhc-CceEEecccCCCCCCCCCCCCC-------------c------------------------------------
Confidence 3567775 9999999999999999754211 0
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch-----------hhhc
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-----------LFAL 150 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~-----------~~~~ 150 (345)
.-..+.+++.|++.....++.+.+|||||+||.++..||.+||++|+.|||++|.+.+..+ .|..
T Consensus 140 ----~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~ 215 (365)
T KOG4409|consen 140 ----TTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYK 215 (365)
T ss_pred ----ccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHh
Confidence 1112579999999999999999999999999999999999999999999999999755422 1110
Q ss_pred --------chhhHHHhhhc-c-hhHHHHHHHHhhhcCC----ChhhHHHHHHHh-ccchhHHHHHHHHHhhccccchhhc
Q 019157 151 --------NLPLIRDFVLG-S-SFGYQWLIRFCCMKKV----GSFDVEDNRVLL-KGRDRCRAVSEMGRKLNNSFDMAEW 215 (345)
Q Consensus 151 --------~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (345)
..|+..-...+ . +....++..... ... ..+.+-+|.... ..+......+..+.....-....-.
T Consensus 216 ~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~-~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~ 294 (365)
T KOG4409|consen 216 ALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRF-RKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMI 294 (365)
T ss_pred hhhhhhhcCCHHHHHHhccccchHHHhhhhHHHH-HhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHH
Confidence 00110000000 0 111111111111 111 222234454422 2222222222222211100000001
Q ss_pred ccccccC-CCCEEEEEecCCCCcch-HhHHHHHhh--CCCCeEEEE-cCCccccccCHHHHHHHHHHHHHcC
Q 019157 216 GSSEGIK-GIPMQILWSSVWSKEWS-EEGSRVADA--LPQAKFVGH-SGGRWPQVDSADELAKHIADFVSSL 282 (345)
Q Consensus 216 ~~~~~~~-~~PvliI~G~~D~D~~~-~~~~~~~~~--~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~ 282 (345)
..+..+. +||+++|+|+ .|-+- ..+.++.+. ...++.+++ ++||++.+++|+.|++.+.+++++.
T Consensus 295 ~r~~~l~~~~pv~fiyG~--~dWmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 295 QRLRELKKDVPVTFIYGD--RDWMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHhhccCCCEEEEecC--cccccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 1112222 6999999999 44444 455555553 344788889 9999999999999999999999863
No 20
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.90 E-value=2.9e-22 Score=180.18 Aligned_cols=217 Identities=16% Similarity=0.203 Sum_probs=132.6
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|++. |+|+++|+||||.|+.+..
T Consensus 48 ~~~l~~~-~~vi~~D~~G~G~S~~~~~----------------------------------------------------- 73 (278)
T TIGR03056 48 MPPLARS-FRVVAPDLPGHGFTRAPFR----------------------------------------------------- 73 (278)
T ss_pred HHHHhhC-cEEEeecCCCCCCCCCccc-----------------------------------------------------
Confidence 4567665 9999999999999976421
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhc
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 161 (345)
..++++++++++.++++.+++++++|+||||||.+++.+|.++|++++++|++++.............+.+......
T Consensus 74 ---~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (278)
T TIGR03056 74 ---FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC 150 (278)
T ss_pred ---cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh
Confidence 14567899999999999999999999999999999999999999999999999876422110000001111110000
Q ss_pred ch---h----------HHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEE
Q 019157 162 SS---F----------GYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQI 228 (345)
Q Consensus 162 ~~---~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvli 228 (345)
.. . ....+... .....+......+....................... .....+..+ ++|+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i-~~P~li 225 (278)
T TIGR03056 151 NPFTPPMMSRGAADQQRVERLIRD-TGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLA---PLNRDLPRI-TIPLHL 225 (278)
T ss_pred cccchHHHHhhcccCcchhHHhhc-cccccccchhhHHHHhhcCchhhhHHHHHhhccccc---chhhhcccC-CCCEEE
Confidence 00 0 00000000 000011111111111111111111111111111100 001122344 589999
Q ss_pred EEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHH
Q 019157 229 LWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 229 I~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
|+|+.|.-...+..+.+.+.+++++++++ ++||++++|.|+++++.|.+|++
T Consensus 226 i~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 226 IAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred EEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99994333333788889999999999999 88999999999999999999974
No 21
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.90 E-value=2.6e-22 Score=186.81 Aligned_cols=189 Identities=11% Similarity=0.095 Sum_probs=109.8
Q ss_pred cChHHHHHHHHHHHHHcCCCcE-EEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch--hhhcchhhHHHhhhc--
Q 019157 87 LGSDEVGRVLGQVIDTFNLAPV-HLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP--LFALNLPLIRDFVLG-- 161 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l~~~~~-~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~--~~~~~~~~~~~~~~~-- 161 (345)
++++++++++.+++++++++++ +||||||||.|++.+|.++|++|+++|++++....... .+.............
T Consensus 118 ~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (343)
T PRK08775 118 IDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQC 197 (343)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCC
Confidence 4557899999999999999775 79999999999999999999999999999986432111 011000000000000
Q ss_pred ch----hHHHHH----------HHHhhhcCCC------hhhHHHHHHH----hccchhHHHHHHHHHhhccccchhhccc
Q 019157 162 SS----FGYQWL----------IRFCCMKKVG------SFDVEDNRVL----LKGRDRCRAVSEMGRKLNNSFDMAEWGS 217 (345)
Q Consensus 162 ~~----~~~~~~----------~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (345)
.. ...... +...+..... ......+... +........+......... ....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 272 (343)
T PRK08775 198 AEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL-----HRVD 272 (343)
T ss_pred CchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh-----cCCC
Confidence 00 000000 0000000000 0001111110 0000001111111111100 0111
Q ss_pred ccccCCCCEEEEEecCCCCcch--HhHHHHHhhC-CCCeEEEE-c-CCccccccCHHHHHHHHHHHHHcCC
Q 019157 218 SEGIKGIPMQILWSSVWSKEWS--EEGSRVADAL-PQAKFVGH-S-GGRWPQVDSADELAKHIADFVSSLP 283 (345)
Q Consensus 218 ~~~~~~~PvliI~G~~D~D~~~--~~~~~~~~~~-~~~~~~~i-~-~GH~~~~e~pe~v~~~I~~fl~~~~ 283 (345)
+.++ ++|+|+|+|+ .|... +..+.+.+.+ |+++++++ + +||++++|+|++|++.|.+||.+..
T Consensus 273 l~~I-~~PtLvi~G~--~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 273 PEAI-RVPTVVVAVE--GDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred hhcC-CCCeEEEEeC--CCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 3444 5899999999 55544 6778888877 79999999 5 8999999999999999999998754
No 22
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.89 E-value=8.7e-22 Score=177.42 Aligned_cols=214 Identities=13% Similarity=0.044 Sum_probs=131.0
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++||+|+++|+||||.|.....
T Consensus 38 ~~~L~~~g~~vi~~dl~g~G~s~~~~~----------------------------------------------------- 64 (273)
T PLN02211 38 RCLMENSGYKVTCIDLKSAGIDQSDAD----------------------------------------------------- 64 (273)
T ss_pred HHHHHhCCCEEEEecccCCCCCCCCcc-----------------------------------------------------
Confidence 456777899999999999998754211
Q ss_pred ccccccChHHHHHHHHHHHHHcC-CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC-Cchh---hhcchhhHH
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFN-LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP-ALPL---FALNLPLIR 156 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~-~~~~---~~~~~~~~~ 156 (345)
..++++++++++.++++.++ .++++||||||||.+++.++.++|++|+++|++++.... .+.. +....+.+.
T Consensus 65 ---~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~ 141 (273)
T PLN02211 65 ---SVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLS 141 (273)
T ss_pred ---cCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchh
Confidence 12566889999999999985 589999999999999999999999999999999875431 1110 100000000
Q ss_pred Hhhh------c-------chh-HHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccC
Q 019157 157 DFVL------G-------SSF-GYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIK 222 (345)
Q Consensus 157 ~~~~------~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (345)
.... . ... ....+....+....+....... ........ ...+. .........++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~---~~~~~~~~~~~~ 210 (273)
T PLN02211 142 EFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLA-AMLLRPGP-------ILALR---SARFEEETGDID 210 (273)
T ss_pred hhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHH-HHhcCCcC-------ccccc---cccccccccccC
Confidence 0000 0 000 0000000000011111100000 00000000 00000 000001123444
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEEcCCccccccCHHHHHHHHHHHHHcC
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQVDSADELAKHIADFVSSL 282 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~~~ 282 (345)
++|+++|.|++|.-.+.+..+.+.+.+++++++.+++||.+++++|+++++.|.++....
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELESDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEECCCCCccccCHHHHHHHHHHHHHHh
Confidence 689999999954444458889999999999998889999999999999999999987654
No 23
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.88 E-value=2.4e-21 Score=171.47 Aligned_cols=217 Identities=18% Similarity=0.156 Sum_probs=131.1
Q ss_pred chhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhccc
Q 019157 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (345)
Q Consensus 3 ~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 82 (345)
+.|.+ +|+|+++|+||||.|+.+..
T Consensus 34 ~~l~~-~~~vi~~D~~G~G~S~~~~~------------------------------------------------------ 58 (257)
T TIGR03611 34 DVLTQ-RFHVVTYDHRGTGRSPGELP------------------------------------------------------ 58 (257)
T ss_pred HHHHh-ccEEEEEcCCCCCCCCCCCc------------------------------------------------------
Confidence 45555 59999999999999976321
Q ss_pred cccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhc-
Q 019157 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG- 161 (345)
Q Consensus 83 ~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~- 161 (345)
..++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++......... .........+..
T Consensus 59 --~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~ 135 (257)
T TIGR03611 59 --PGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR-RCFDVRIALLQHA 135 (257)
T ss_pred --ccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH-HHHHHHHHHHhcc
Confidence 2456789999999999999999999999999999999999999999999999997643211100 000000000000
Q ss_pred -chhHHHHHHHHh----hhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCC
Q 019157 162 -SSFGYQWLIRFC----CMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSK 236 (345)
Q Consensus 162 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D 236 (345)
............ ................................+.. .+. ...+..+ ++|+++++|+.|.-
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i-~~P~l~i~g~~D~~ 211 (257)
T TIGR03611 136 GPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEA-FDV--SARLDRI-QHPVLLIANRDDML 211 (257)
T ss_pred CcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHc-CCc--HHHhccc-CccEEEEecCcCcc
Confidence 000000000000 00000000000000000000011111111111110 011 1222344 58999999994433
Q ss_pred cchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 237 EWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
...+.++.+.+.+++++++.+ ++||++++++|+++++.|.+||++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 212 VPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred cCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 444778889999999999999 899999999999999999999863
No 24
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.88 E-value=4.7e-22 Score=185.61 Aligned_cols=216 Identities=15% Similarity=0.135 Sum_probs=126.9
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+++||+|+++|+||||.|+.+..
T Consensus 108 ~~~l~~~g~~v~~~D~~G~G~S~~~~~----------------------------------------------------- 134 (349)
T PLN02385 108 ARKIASSGYGVFAMDYPGFGLSEGLHG----------------------------------------------------- 134 (349)
T ss_pred HHHHHhCCCEEEEecCCCCCCCCCCCC-----------------------------------------------------
Confidence 456778899999999999999986321
Q ss_pred ccccccChHHHHHHHHHHHHHcCC------CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCc---hhhhc--
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNL------APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL---PLFAL-- 150 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~------~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~---~~~~~-- 150 (345)
...+++++++++.++++.+.. .+++|+||||||.+++.+|.++|++|+++|+++|...... +.+..
T Consensus 135 ---~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~ 211 (349)
T PLN02385 135 ---YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQ 211 (349)
T ss_pred ---CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHH
Confidence 112457788888888877654 2799999999999999999999999999999998643111 10000
Q ss_pred chhhHHHhhhcchhHH-HHHHHHhhhcCCChhhHHHHH-HHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEE
Q 019157 151 NLPLIRDFVLGSSFGY-QWLIRFCCMKKVGSFDVEDNR-VLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQI 228 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvli 228 (345)
....+........... ..+..... ..........+. ..+............++... .....+..+ ++|+|+
T Consensus 212 ~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~l~~i-~~P~Li 284 (349)
T PLN02385 212 ILILLANLLPKAKLVPQKDLAELAF-RDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQ-----EIEMQLEEV-SLPLLI 284 (349)
T ss_pred HHHHHHHHCCCceecCCCccccccc-cCHHHHHHhhcCcceeCCCcchHHHHHHHHHHH-----HHHHhcccC-CCCEEE
Confidence 0000000000000000 00000000 000000000000 00000111111122221110 111223445 599999
Q ss_pred EEecCCCCcch--HhHHHHHhhC--CCCeEEEE-cCCccccccCHHH----HHHHHHHHHHcC
Q 019157 229 LWSSVWSKEWS--EEGSRVADAL--PQAKFVGH-SGGRWPQVDSADE----LAKHIADFVSSL 282 (345)
Q Consensus 229 I~G~~D~D~~~--~~~~~~~~~~--~~~~~~~i-~~GH~~~~e~pe~----v~~~I~~fl~~~ 282 (345)
|+|+ .|.++ +.++.+.+.+ ++.+++++ ++||++++|+|++ +++.|.+||++.
T Consensus 285 i~G~--~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 285 LHGE--ADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred EEeC--CCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 9999 55554 7778888877 56899999 8999999999987 888999999864
No 25
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.88 E-value=6.1e-21 Score=171.49 Aligned_cols=217 Identities=14% Similarity=0.126 Sum_probs=127.7
Q ss_pred hhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcccc
Q 019157 4 SLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVK 83 (345)
Q Consensus 4 ~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (345)
.|.+.||+|+++|+||+|.|+.+....
T Consensus 48 ~l~~~g~~vi~~d~~G~G~s~~~~~~~----------------------------------------------------- 74 (288)
T TIGR01250 48 LLKEEGREVIMYDQLGCGYSDQPDDSD----------------------------------------------------- 74 (288)
T ss_pred HHHhcCCEEEEEcCCCCCCCCCCCccc-----------------------------------------------------
Confidence 445558999999999999997632100
Q ss_pred ccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcch
Q 019157 84 VIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSS 163 (345)
Q Consensus 84 ~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (345)
..++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++...... +..........+. .
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~--~ 149 (288)
T TIGR01250 75 -ELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPE--YVKELNRLRKELP--P 149 (288)
T ss_pred -ccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchH--HHHHHHHHHhhcC--h
Confidence 0256689999999999999999999999999999999999999999999999987643211 1000000000000 0
Q ss_pred hHHHHHHHHhhhcCCChhhHHHHHHHhc------cchhHHHHHHH--------HHhhcc--cc-------chhhcccccc
Q 019157 164 FGYQWLIRFCCMKKVGSFDVEDNRVLLK------GRDRCRAVSEM--------GRKLNN--SF-------DMAEWGSSEG 220 (345)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--------~~~~~~--~~-------~~~~~~~~~~ 220 (345)
.....+....................+. ........... +..+.. .+ .......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (288)
T TIGR01250 150 EVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSE 229 (288)
T ss_pred hHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhc
Confidence 0000000000000000100001000000 00000000000 000000 00 0000112233
Q ss_pred cCCCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHH
Q 019157 221 IKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 221 ~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
+ ++|+++++|+.|.- ..+..+.+.+.+++++++++ ++||++++|+|+++++.|.+||+
T Consensus 230 i-~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 230 I-KVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred c-CCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 4 59999999995442 23677888889999999999 89999999999999999999984
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.88 E-value=2.1e-21 Score=170.12 Aligned_cols=211 Identities=13% Similarity=0.118 Sum_probs=122.9
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.+ +|+|+++|+||+|.|+...
T Consensus 24 ~~~l~~-~~~vi~~d~~G~G~s~~~~------------------------------------------------------ 48 (245)
T TIGR01738 24 DEELSA-HFTLHLVDLPGHGRSRGFG------------------------------------------------------ 48 (245)
T ss_pred HHhhcc-CeEEEEecCCcCccCCCCC------------------------------------------------------
Confidence 456765 4999999999999986521
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCc-hhhhc--chhhHHHh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL-PLFAL--NLPLIRDF 158 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~-~~~~~--~~~~~~~~ 158 (345)
.++++++++++.+++ .+++++|||||||.+++.+|.++|++|+++|++++...... ..|.. ....+...
T Consensus 49 ----~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (245)
T TIGR01738 49 ----PLSLADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGF 120 (245)
T ss_pred ----CcCHHHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHH
Confidence 234466676665543 26999999999999999999999999999999987642111 11110 00011111
Q ss_pred hh----cchhHHHHHHHHhh-hcCCChhhHHHHHHHhcc--chhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEe
Q 019157 159 VL----GSSFGYQWLIRFCC-MKKVGSFDVEDNRVLLKG--RDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWS 231 (345)
Q Consensus 159 ~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G 231 (345)
.. ........+..... ...............+.. ..........+..+.. .+ ....+..+ ++|+++|+|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~l~~i-~~Pvlii~g 196 (245)
T TIGR01738 121 QQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILAT-VD--LRQPLQNI-SVPFLRLYG 196 (245)
T ss_pred HHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhc-cc--HHHHHhcC-CCCEEEEee
Confidence 00 00111111111111 111111111111111111 0001111111111111 01 11122445 589999999
Q ss_pred cCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHH
Q 019157 232 SVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFV 279 (345)
Q Consensus 232 ~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl 279 (345)
+.|.-...+..+.+.+.+|+++++++ ++||++++|+|+++++.|.+|+
T Consensus 197 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 197 YLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred cCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 94433334777888999999999999 8999999999999999999985
No 27
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=1.3e-21 Score=179.50 Aligned_cols=194 Identities=21% Similarity=0.198 Sum_probs=114.4
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEe---CCCCCCchhhhcchhhHHHhhhc-
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLD---TGIKPALPLFALNLPLIRDFVLG- 161 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~---~~~~~~~~~~~~~~~~~~~~~~~- 161 (345)
.|+..+.++.+..++...+..+++||||||||.+|+.+|+.+|+.|+++|+++ +...............+......
T Consensus 108 ~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (326)
T KOG1454|consen 108 LYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSAL 187 (326)
T ss_pred ceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHh
Confidence 36778999999999999999999999999999999999999999999999444 44321111000011111100000
Q ss_pred ---c--------hhHHHHHHHHhhhc-CCChhhHHHHHHHhccc----hhHHHHHHHHHhhccccchhhcccccccCCCC
Q 019157 162 ---S--------SFGYQWLIRFCCMK-KVGSFDVEDNRVLLKGR----DRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIP 225 (345)
Q Consensus 162 ---~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 225 (345)
. ..+...+....... .......+........+ ........++..+... +.........+.++|
T Consensus 188 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~p 266 (326)
T KOG1454|consen 188 ELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGF-DENLLSLIKKIWKCP 266 (326)
T ss_pred hhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCc-cchHHHhhccccCCc
Confidence 0 00111111100000 00011111111111111 0001111111111100 011111224444699
Q ss_pred EEEEEecCCCCcch--HhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHcC
Q 019157 226 MQILWSSVWSKEWS--EEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSSL 282 (345)
Q Consensus 226 vliI~G~~D~D~~~--~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~ 282 (345)
++||||+ .|.++ +.+..+.+.+|+++++++ ++||.+++|+|+++++.|..|+...
T Consensus 267 vlii~G~--~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 267 VLIIWGD--KDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred eEEEEcC--cCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 9999999 66665 788999999999999999 8999999999999999999999875
No 28
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.87 E-value=6.4e-21 Score=167.16 Aligned_cols=219 Identities=17% Similarity=0.169 Sum_probs=131.2
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+ +||+|+++|+||+|.|+.+...
T Consensus 21 ~~~L~-~~~~v~~~d~~g~G~s~~~~~~---------------------------------------------------- 47 (251)
T TIGR03695 21 IELLG-PHFRCLAIDLPGHGSSQSPDEI---------------------------------------------------- 47 (251)
T ss_pred HHHhc-ccCeEEEEcCCCCCCCCCCCcc----------------------------------------------------
Confidence 45677 6799999999999999764210
Q ss_pred ccccccChHHHHHH-HHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchh-hhc---chhhHH
Q 019157 82 VKVIELGSDEVGRV-LGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPL-FAL---NLPLIR 156 (345)
Q Consensus 82 ~~~~~~~~~~~~~~-l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~-~~~---~~~~~~ 156 (345)
..++.++++++ +..+++.++.++++|+||||||.+++.+|.++|++|+++|++++........ ... ....+.
T Consensus 48 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 124 (251)
T TIGR03695 48 ---ERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLA 124 (251)
T ss_pred ---ChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhh
Confidence 12455778888 7888888888999999999999999999999999999999998764221110 000 000000
Q ss_pred Hhhhc--chhHHHHHHHHhhhcC---CChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEe
Q 019157 157 DFVLG--SSFGYQWLIRFCCMKK---VGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWS 231 (345)
Q Consensus 157 ~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G 231 (345)
..+.. .......+........ .+......+....... ........+...........+..+..+ ++|+++|+|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g 202 (251)
T TIGR03695 125 QRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN-NPEGLAKMLRATGLGKQPSLWPKLQAL-TIPVLYLCG 202 (251)
T ss_pred hHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccc-cchHHHHHHHHhhhhcccchHHHhhCC-CCceEEEee
Confidence 00000 0011111111000000 1222221121111111 111111121111111111111222344 589999999
Q ss_pred cCCCCcch-HhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHH
Q 019157 232 SVWSKEWS-EEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 232 ~~D~D~~~-~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
+ .|... +..+.+.+..++++++++ ++||++++|+|+++++.|.+|++
T Consensus 203 ~--~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 203 E--KDEKFVQIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred C--cchHHHHHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 9 55544 567788888999999999 78999999999999999999983
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.87 E-value=5.7e-21 Score=167.84 Aligned_cols=213 Identities=16% Similarity=0.196 Sum_probs=131.8
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.+ ||+|+++|+||||.|+.+.
T Consensus 33 ~~~l~~-~~~v~~~d~~G~G~s~~~~------------------------------------------------------ 57 (251)
T TIGR02427 33 LPALTP-DFRVLRYDKRGHGLSDAPE------------------------------------------------------ 57 (251)
T ss_pred HHHhhc-ccEEEEecCCCCCCCCCCC------------------------------------------------------
Confidence 345654 6999999999999996532
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch-hhhcchhhHHHhhh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LFALNLPLIRDFVL 160 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~-~~~~~~~~~~~~~~ 160 (345)
..++.+++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++....... .+... +.....
T Consensus 58 ---~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~---~~~~~~ 131 (251)
T TIGR02427 58 ---GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR---IAAVRA 131 (251)
T ss_pred ---CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH---Hhhhhh
Confidence 14566889999999999999999999999999999999999999999999999876432111 11100 000000
Q ss_pred -cchhHHHHHHHHhhhcC---CChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCC
Q 019157 161 -GSSFGYQWLIRFCCMKK---VGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSK 236 (345)
Q Consensus 161 -~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D 236 (345)
................. ........+...+.... ...+......+.. ......+..+ ++|+++|+|+.|.-
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~-~~Pvlii~g~~D~~ 206 (251)
T TIGR02427 132 EGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQP-PDGYAGCCAAIRD---ADFRDRLGAI-AVPTLCIAGDQDGS 206 (251)
T ss_pred ccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhcC-HHHHHHHHHHHhc---ccHHHHhhhc-CCCeEEEEeccCCc
Confidence 00011111111111110 01111112221111111 1111111111111 0111122344 58999999994444
Q ss_pred cchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHH
Q 019157 237 EWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
...+..+.+.+.+++.+++++ ++||++++++|+++++.|.+|++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 207 TPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 444777888999999999999 79999999999999999999974
No 30
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.86 E-value=1.3e-20 Score=175.95 Aligned_cols=193 Identities=15% Similarity=0.112 Sum_probs=112.3
Q ss_pred ccChHHHHHHHHHHHHHcCCCc-EEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhh-c--
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAP-VHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL-G-- 161 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~-~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~-~-- 161 (345)
.|+++++++++.++++++++++ ++|+||||||++++.+|.++|++|+++|++++..........+. ......+. .
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 184 (351)
T TIGR01392 106 LITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFN-EVQRQAILADPN 184 (351)
T ss_pred CCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHH-HHHHHHHHhCCC
Confidence 5788999999999999999998 99999999999999999999999999999998753221100000 00000000 0
Q ss_pred -----c-----h-hHH--HHH-----------HHHhhhcCCCh-----------hhHHHHHH-----Hhcc--chhHHHH
Q 019157 162 -----S-----S-FGY--QWL-----------IRFCCMKKVGS-----------FDVEDNRV-----LLKG--RDRCRAV 199 (345)
Q Consensus 162 -----~-----~-~~~--~~~-----------~~~~~~~~~~~-----------~~~~~~~~-----~~~~--~~~~~~~ 199 (345)
. + ..+ ... +...+...... .....+.. .... .......
T Consensus 185 ~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 264 (351)
T TIGR01392 185 WNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYL 264 (351)
T ss_pred CCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHH
Confidence 0 0 000 000 00001000000 00111110 0000 0000011
Q ss_pred HHHHHhhccccc-hhhcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCCeEE-----EE-cCCccccccCHHHHH
Q 019157 200 SEMGRKLNNSFD-MAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFV-----GH-SGGRWPQVDSADELA 272 (345)
Q Consensus 200 ~~~~~~~~~~~~-~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~-----~i-~~GH~~~~e~pe~v~ 272 (345)
...+...+.... ...+..+.++ ++|+|+|+|+.|.-.+.+.++.+++.+|+++++ ++ ++||++++|+|++|+
T Consensus 265 ~~~l~~~d~~~~~~~~~~~l~~I-~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~ 343 (351)
T TIGR01392 265 TRALDTHDLGRGRGSLTEALSRI-KAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVE 343 (351)
T ss_pred HHHHHhcCCcCCCCCHHHHHhhC-CCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHH
Confidence 111111111000 0112333455 589999999944434447889999999998766 45 789999999999999
Q ss_pred HHHHHHHH
Q 019157 273 KHIADFVS 280 (345)
Q Consensus 273 ~~I~~fl~ 280 (345)
+.|.+||+
T Consensus 344 ~~l~~FL~ 351 (351)
T TIGR01392 344 ELIRGFLR 351 (351)
T ss_pred HHHHHHhC
Confidence 99999984
No 31
>PHA02857 monoglyceride lipase; Provisional
Probab=99.86 E-value=5.1e-21 Score=172.63 Aligned_cols=216 Identities=15% Similarity=0.087 Sum_probs=119.4
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++||+|+++|+||||.|+.... ..
T Consensus 45 ~~~l~~~g~~via~D~~G~G~S~~~~~--------~~------------------------------------------- 73 (276)
T PHA02857 45 AENISSLGILVFSHDHIGHGRSNGEKM--------MI------------------------------------------- 73 (276)
T ss_pred HHHHHhCCCEEEEccCCCCCCCCCccC--------Cc-------------------------------------------
Confidence 567888899999999999999975211 00
Q ss_pred ccccccChHHHHHHHHHHHH----HcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHH
Q 019157 82 VKVIELGSDEVGRVLGQVID----TFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRD 157 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~----~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 157 (345)
.+..++++++.+.++ .....+++|+||||||.+++.+|.++|++|+++|+++|....... + ....+..
T Consensus 74 -----~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~-~--~~~~~~~ 145 (276)
T PHA02857 74 -----DDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAV-P--RLNLLAA 145 (276)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccc-c--HHHHHHH
Confidence 011233444444443 344568999999999999999999999999999999986532110 0 0000000
Q ss_pred hhhcchhHHHHHHHHhhhcCCChh--hHHHHHH-Hhccch-hHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecC
Q 019157 158 FVLGSSFGYQWLIRFCCMKKVGSF--DVEDNRV-LLKGRD-RCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSV 233 (345)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~ 233 (345)
..... ..............+... ....+.. .+.... ....+........ ......+..+ ++|+++|+|+.
T Consensus 146 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i-~~Pvliv~G~~ 219 (276)
T PHA02857 146 KLMGI-FYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKAT----NKVRKIIPKI-KTPILILQGTN 219 (276)
T ss_pred HHHHH-hCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHH----HHHHHhcccC-CCCEEEEecCC
Confidence 00000 000000000000000000 1111110 000000 0011111111100 0111223444 59999999994
Q ss_pred CCCcchHhHHHHHhhC-CCCeEEEE-cCCccccccCH---HHHHHHHHHHHHcC
Q 019157 234 WSKEWSEEGSRVADAL-PQAKFVGH-SGGRWPQVDSA---DELAKHIADFVSSL 282 (345)
Q Consensus 234 D~D~~~~~~~~~~~~~-~~~~~~~i-~~GH~~~~e~p---e~v~~~I~~fl~~~ 282 (345)
|.-...+.+..+.+.+ ++.+++++ ++||+++.|.+ +++.+.|.+||...
T Consensus 220 D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 220 NEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 4433347888888876 46889999 89999999876 57899999999874
No 32
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.86 E-value=8.6e-21 Score=175.76 Aligned_cols=214 Identities=15% Similarity=0.069 Sum_probs=124.4
Q ss_pred chhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhccc
Q 019157 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (345)
Q Consensus 3 ~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 82 (345)
..|.++||+|+++|+||||.|+.+..
T Consensus 81 ~~L~~~Gy~V~~~D~rGhG~S~~~~~------------------------------------------------------ 106 (330)
T PLN02298 81 IFLAQMGFACFALDLEGHGRSEGLRA------------------------------------------------------ 106 (330)
T ss_pred HHHHhCCCEEEEecCCCCCCCCCccc------------------------------------------------------
Confidence 45778899999999999999975321
Q ss_pred cccccChHHHHHHHHHHHHHcCC------CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhh-hcchhhH
Q 019157 83 KVIELGSDEVGRVLGQVIDTFNL------APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLF-ALNLPLI 155 (345)
Q Consensus 83 ~~~~~~~~~~~~~l~~ll~~l~~------~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~-~~~~~~~ 155 (345)
...+++.+++++.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|......... ......+
T Consensus 107 --~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 184 (330)
T PLN02298 107 --YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQI 184 (330)
T ss_pred --cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHH
Confidence 112446788888888886643 3799999999999999999999999999999998642111000 0000000
Q ss_pred HHhhhcchhHHHHHHHHhhh--------cCCChhhHHHHHH--H--hccchhHHHHHHHHHhhccccchhhcccccccCC
Q 019157 156 RDFVLGSSFGYQWLIRFCCM--------KKVGSFDVEDNRV--L--LKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKG 223 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (345)
... ...+...... ............. . +.............+... .....+..+ +
T Consensus 185 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i-~ 251 (330)
T PLN02298 185 LTF-------VARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTD-----YLGKKLKDV-S 251 (330)
T ss_pred HHH-------HHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHH-----HHHHhhhhc-C
Confidence 000 0000000000 0000000000000 0 000000011111111100 011223445 5
Q ss_pred CCEEEEEecCCCCcchHhHHHHHhhCC--CCeEEEE-cCCccccccCHH----HHHHHHHHHHHcCCcc
Q 019157 224 IPMQILWSSVWSKEWSEEGSRVADALP--QAKFVGH-SGGRWPQVDSAD----ELAKHIADFVSSLPKT 285 (345)
Q Consensus 224 ~PvliI~G~~D~D~~~~~~~~~~~~~~--~~~~~~i-~~GH~~~~e~pe----~v~~~I~~fl~~~~~~ 285 (345)
+|+|||+|+.|.-...+.++.+.+.++ +.+++++ ++||++++++|+ ++.+.|.+||.+.-..
T Consensus 252 ~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 252 IPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 999999999443334477788877764 6899999 889999998885 4677888999876443
No 33
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.85 E-value=1.7e-20 Score=163.53 Aligned_cols=190 Identities=15% Similarity=0.160 Sum_probs=108.1
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC--C--Cchhhhc--chhhHHHhh
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK--P--ALPLFAL--NLPLIRDFV 159 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~--~--~~~~~~~--~~~~~~~~~ 159 (345)
.|+.+++++++..+++.+++++++++||||||.+++.+|.++|++|+++|+++++.. . ..+.+.. ....+....
T Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (230)
T PF00561_consen 24 DYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNF 103 (230)
T ss_dssp THCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhh
Confidence 567799999999999999999999999999999999999999999999999998620 0 0000000 000000000
Q ss_pred hc-----chhHHHHHHHH-hhh-cC-CChhhHHHHHHHhccchhHHHHHHHHHhhcccc-chhhcccccccCCCCEEEEE
Q 019157 160 LG-----SSFGYQWLIRF-CCM-KK-VGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSF-DMAEWGSSEGIKGIPMQILW 230 (345)
Q Consensus 160 ~~-----~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~PvliI~ 230 (345)
.. ........... ... .. ................................. .......+..+ ++|+++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~p~l~i~ 182 (230)
T PF00561_consen 104 FNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNI-KVPTLIIW 182 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TSEEEEEE
T ss_pred hccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccccccccccccccccccc-CCCeEEEE
Confidence 00 00000100000 000 00 000000000000000000011111111000000 00001122334 68999999
Q ss_pred ecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHH
Q 019157 231 SSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIA 276 (345)
Q Consensus 231 G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~ 276 (345)
|++|...+.+....+.+.+|+.+++++ ++||+.+++.|+++++.|.
T Consensus 183 ~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 183 GEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp ETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred eCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 995555555888889999999999999 7799999999999999886
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=8.7e-20 Score=172.95 Aligned_cols=193 Identities=9% Similarity=0.018 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch-hh---hcc-hh-h---HHHhh-
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LF---ALN-LP-L---IRDFV- 159 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~-~~---~~~-~~-~---~~~~~- 159 (345)
+.+++++.++++.+++++++|+||||||.+++.+|.++|++|+++|++++....... .+ ... .. . +....
T Consensus 160 ~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (402)
T PLN02894 160 AWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLW 239 (402)
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHh
Confidence 346788888899999999999999999999999999999999999999987533211 10 000 00 0 00000
Q ss_pred ---------hc-c----hhHHHHHHHHhhhc-----CCChhh---HHHHHH-HhccchhHHHHHHHHHhhccccchhhcc
Q 019157 160 ---------LG-S----SFGYQWLIRFCCMK-----KVGSFD---VEDNRV-LLKGRDRCRAVSEMGRKLNNSFDMAEWG 216 (345)
Q Consensus 160 ---------~~-~----~~~~~~~~~~~~~~-----~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (345)
.. . ......+....+.. .++... +..+.. ...........+................
T Consensus 240 ~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (402)
T PLN02894 240 ESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLE 319 (402)
T ss_pred hcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhh
Confidence 00 0 00011111110100 011111 111111 1111111111122221111000111112
Q ss_pred cccccCCCCEEEEEecCCCCcch-HhHHHHHhhC-CCCeEEEE-cCCccccccCHHHHHHHHHHHHHcCCcc
Q 019157 217 SSEGIKGIPMQILWSSVWSKEWS-EEGSRVADAL-PQAKFVGH-SGGRWPQVDSADELAKHIADFVSSLPKT 285 (345)
Q Consensus 217 ~~~~~~~~PvliI~G~~D~D~~~-~~~~~~~~~~-~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~~~~ 285 (345)
.+..+ ++|+++|+|+ .|.+. .....+.+.. +.++++++ ++||++++|+|++|++.|.+|++.....
T Consensus 320 ~l~~I-~vP~liI~G~--~D~i~~~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 320 SASEW-KVPTTFIYGR--HDWMNYEGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred hcccC-CCCEEEEEeC--CCCCCcHHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 33455 5999999999 45444 4455555555 35789999 8999999999999999999999876544
No 35
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=5.3e-20 Score=173.47 Aligned_cols=197 Identities=11% Similarity=0.025 Sum_probs=114.2
Q ss_pred ccChHHHHHHHHHHHHHcCCCc-EEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchh--hhc-chhhHHHh-h-
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAP-VHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPL--FAL-NLPLIRDF-V- 159 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~-~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~--~~~-~~~~~~~~-~- 159 (345)
.|+++++++++.++++++++++ ++||||||||.+++.+|.++|++|+++|++++........ +.. ....+... .
T Consensus 126 ~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 126 VITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDW 205 (379)
T ss_pred cCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 5778999999999999999999 5899999999999999999999999999999875322110 100 00000000 0
Q ss_pred h-------cchh----HHHH-----------HHHHhhhcCCC-h---------hhHHHHHH----HhccchhHHHHH---
Q 019157 160 L-------GSSF----GYQW-----------LIRFCCMKKVG-S---------FDVEDNRV----LLKGRDRCRAVS--- 200 (345)
Q Consensus 160 ~-------~~~~----~~~~-----------~~~~~~~~~~~-~---------~~~~~~~~----~~~~~~~~~~~~--- 200 (345)
. .... ...+ .+...+..... . .....++. .+........+.
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 0 0000 0000 00000000000 0 01111110 000000011111
Q ss_pred HHHHhhccccc--hhhcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCC----eEEEE--cCCccccccCHHHHH
Q 019157 201 EMGRKLNNSFD--MAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA----KFVGH--SGGRWPQVDSADELA 272 (345)
Q Consensus 201 ~~~~~~~~~~~--~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~----~~~~i--~~GH~~~~e~pe~v~ 272 (345)
..+........ ...+..+..+ ++|+|+|+|+.|.-...+.++.+++.++++ +++++ ++||++++|+|++|+
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l~~I-~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~ 364 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAALARI-KARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYG 364 (379)
T ss_pred HHHHhccccCCCCCCHHHHHhcC-CCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHH
Confidence 11111111000 0122334555 589999999944333347888899999887 67766 699999999999999
Q ss_pred HHHHHHHHcCC
Q 019157 273 KHIADFVSSLP 283 (345)
Q Consensus 273 ~~I~~fl~~~~ 283 (345)
+.|.+||+...
T Consensus 365 ~~L~~FL~~~~ 375 (379)
T PRK00175 365 RLVRAFLERAA 375 (379)
T ss_pred HHHHHHHHhhh
Confidence 99999998753
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=99.85 E-value=2e-20 Score=173.28 Aligned_cols=226 Identities=13% Similarity=0.065 Sum_probs=125.4
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
+..|.++||+|+++|+||||.|+.+.... ..|
T Consensus 74 ~~~l~~~g~~v~~~D~~G~G~S~~~~~~~---~~~--------------------------------------------- 105 (330)
T PRK10749 74 AYDLFHLGYDVLIIDHRGQGRSGRLLDDP---HRG--------------------------------------------- 105 (330)
T ss_pred HHHHHHCCCeEEEEcCCCCCCCCCCCCCC---CcC---------------------------------------------
Confidence 34577889999999999999997632100 000
Q ss_pred ccccccChHHHHHHHHHHHHHc----CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHH
Q 019157 82 VKVIELGSDEVGRVLGQVIDTF----NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRD 157 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 157 (345)
..++++++++++.++++.+ +..+++|+||||||.+++.+|.++|++|+++|+++|......+........+..
T Consensus 106 ---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 182 (330)
T PRK10749 106 ---HVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILN 182 (330)
T ss_pred ---ccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHH
Confidence 1235578888888888776 668999999999999999999999999999999988642111100000000000
Q ss_pred hhhcch-------hHHHHHHHHhh-hcCC--ChhhHHHHHHHhccchhH---HHHHHHHHhhccccchhhcccccccCCC
Q 019157 158 FVLGSS-------FGYQWLIRFCC-MKKV--GSFDVEDNRVLLKGRDRC---RAVSEMGRKLNNSFDMAEWGSSEGIKGI 224 (345)
Q Consensus 158 ~~~~~~-------~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (345)
...... ........... ...+ .......+...+...... .....+........ ......+..+ ++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i-~~ 260 (330)
T PRK10749 183 WAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAG-EQVLAGAGDI-TT 260 (330)
T ss_pred HHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHH-HHHHhhccCC-CC
Confidence 000000 00000000000 0000 011111111111111000 00111111100000 0001222444 58
Q ss_pred CEEEEEecCCCCcch--HhHHHHHhhC-------CCCeEEEE-cCCccccccCH---HHHHHHHHHHHHcC
Q 019157 225 PMQILWSSVWSKEWS--EEGSRVADAL-------PQAKFVGH-SGGRWPQVDSA---DELAKHIADFVSSL 282 (345)
Q Consensus 225 PvliI~G~~D~D~~~--~~~~~~~~~~-------~~~~~~~i-~~GH~~~~e~p---e~v~~~I~~fl~~~ 282 (345)
|+|+|+|+ .|.++ +.++.+.+.+ ++++++++ ++||.++.|.+ +++.+.|.+||.+.
T Consensus 261 P~Lii~G~--~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 261 PLLLLQAE--EERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CEEEEEeC--CCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999999 56555 6667677655 34578999 89999999886 66889999998763
No 37
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.83 E-value=1.4e-19 Score=196.15 Aligned_cols=229 Identities=10% Similarity=0.116 Sum_probs=136.4
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.+. |+||++|+||||.|+.+..... .
T Consensus 1391 ~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~-------------------------------------------------~ 1420 (1655)
T PLN02980 1391 MKAISGS-ARCISIDLPGHGGSKIQNHAKE-------------------------------------------------T 1420 (1655)
T ss_pred HHHHhCC-CEEEEEcCCCCCCCCCcccccc-------------------------------------------------c
Confidence 4566665 9999999999999976321000 0
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch-hhhcch---hhHHH
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LFALNL---PLIRD 157 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~-~~~~~~---~~~~~ 157 (345)
.....++++.+++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++....... .+.... .....
T Consensus 1421 ~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~ 1500 (1655)
T PLN02980 1421 QTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRAR 1500 (1655)
T ss_pred cccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHH
Confidence 00124677899999999999999999999999999999999999999999999999875321111 010000 00000
Q ss_pred hhhcchhHHHHHHHHhhhc----CC-ChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEec
Q 019157 158 FVLGSSFGYQWLIRFCCMK----KV-GSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSS 232 (345)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~ 232 (345)
.+.. .....+...+... .. ........................+..+........+..+..+ ++|+|+|+|+
T Consensus 1501 ~l~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I-~~PtLlI~Ge 1577 (1655)
T PLN02980 1501 MLID--HGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQC-DTPLLLVVGE 1577 (1655)
T ss_pred HHHh--hhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhC-CCCEEEEEEC
Confidence 0000 0011111111100 00 1111111111111111111222222222111111122334555 4899999999
Q ss_pred CCCCcch-HhHHHHHhhCCC------------CeEEEE-cCCccccccCHHHHHHHHHHHHHcCCcc
Q 019157 233 VWSKEWS-EEGSRVADALPQ------------AKFVGH-SGGRWPQVDSADELAKHIADFVSSLPKT 285 (345)
Q Consensus 233 ~D~D~~~-~~~~~~~~~~~~------------~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~~~~ 285 (345)
+|... +.+.++.+.+++ ++++++ ++||++++|+|+++++.|.+||....++
T Consensus 1578 --~D~~~~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1578 --KDVKFKQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred --CCCccHHHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcccc
Confidence 55554 556677777765 478899 8999999999999999999999986654
No 38
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.81 E-value=3.6e-18 Score=160.37 Aligned_cols=195 Identities=11% Similarity=0.008 Sum_probs=115.7
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEE-EEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhh-hc--
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVH-LVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFV-LG-- 161 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~-lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~-~~-- 161 (345)
.++++++++++.++++++++++++ +|||||||++++.+|.++|++|+++|++++...................+ ..
T Consensus 140 ~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~ 219 (389)
T PRK06765 140 VVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPN 219 (389)
T ss_pred cCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCC
Confidence 478899999999999999999997 99999999999999999999999999998875321110000000000000 00
Q ss_pred -----c-----h--------------hHHHHHHHHhhhcC--C---------ChhhHHHHHHH----hccchhHHHHHHH
Q 019157 162 -----S-----S--------------FGYQWLIRFCCMKK--V---------GSFDVEDNRVL----LKGRDRCRAVSEM 202 (345)
Q Consensus 162 -----~-----~--------------~~~~~~~~~~~~~~--~---------~~~~~~~~~~~----~~~~~~~~~~~~~ 202 (345)
+ + ......+...+.+. . ....++.|... +........++..
T Consensus 220 ~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l 299 (389)
T PRK06765 220 WKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYL 299 (389)
T ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHH
Confidence 0 0 00000111111110 0 00122222221 1111112222222
Q ss_pred HHhhccc---cch-hhcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCC----CCeEEEE-c-CCccccccCHHHHH
Q 019157 203 GRKLNNS---FDM-AEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALP----QAKFVGH-S-GGRWPQVDSADELA 272 (345)
Q Consensus 203 ~~~~~~~---~~~-~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~----~~~~~~i-~-~GH~~~~e~pe~v~ 272 (345)
.+.+... ... .....+..+ ++|+++|+|+.|.-.+.+..+.+++.++ +++++++ + +||++++|+|++++
T Consensus 300 ~~a~~~~d~g~~~~dl~~~L~~I-~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~ 378 (389)
T PRK06765 300 AKAVQLFDAGHGFSSLEEALSNI-EANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFE 378 (389)
T ss_pred HHHHHhcCCccccCCHHHHHhcC-CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHH
Confidence 2222111 010 111223445 5899999999444344477778888886 6889989 5 79999999999999
Q ss_pred HHHHHHHHc
Q 019157 273 KHIADFVSS 281 (345)
Q Consensus 273 ~~I~~fl~~ 281 (345)
+.|.+||++
T Consensus 379 ~~I~~FL~~ 387 (389)
T PRK06765 379 KKIYEFLNR 387 (389)
T ss_pred HHHHHHHcc
Confidence 999999975
No 39
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.80 E-value=4.8e-18 Score=159.67 Aligned_cols=187 Identities=18% Similarity=0.163 Sum_probs=104.9
Q ss_pred cChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhh-cchhH
Q 019157 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL-GSSFG 165 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 165 (345)
++++++++++.++++.++..+++|+||||||.+++.+|.++|++|.++|++++........ ......... .....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 253 (371)
T PRK14875 178 GSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN----GDYIDGFVAAESRRE 253 (371)
T ss_pred CCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc----hhHHHHhhcccchhH
Confidence 3557899999999999999999999999999999999999999999999998864221100 000000000 00011
Q ss_pred HHHHHHHhhh--cCCChhhHHHHHHHhccchhHHHHHHHHHhh-ccccc-hhhcccccccCCCCEEEEEecCCCCcchHh
Q 019157 166 YQWLIRFCCM--KKVGSFDVEDNRVLLKGRDRCRAVSEMGRKL-NNSFD-MAEWGSSEGIKGIPMQILWSSVWSKEWSEE 241 (345)
Q Consensus 166 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~PvliI~G~~D~D~~~~~ 241 (345)
+...+..... .......................+....... ..... ......+..+ ++|+++|+|+.|.....+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~vp~~~ 332 (371)
T PRK14875 254 LKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASL-AIPVLVIWGEQDRIIPAAH 332 (371)
T ss_pred HHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcC-CCCEEEEEECCCCccCHHH
Confidence 1111111110 0111111111111111111111111111111 11000 1111122344 5999999999433333344
Q ss_pred HHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 242 GSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
.+. ..+++++.++ ++||++++++|+++++.|.+||+.
T Consensus 333 ~~~---l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 333 AQG---LPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred Hhh---ccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 333 2346788888 799999999999999999999974
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.80 E-value=2.1e-18 Score=158.14 Aligned_cols=83 Identities=11% Similarity=0.109 Sum_probs=70.6
Q ss_pred hhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhccccc
Q 019157 5 LRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVKV 84 (345)
Q Consensus 5 L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (345)
+..++|+||++|+||||.|+.+...
T Consensus 49 ~~~~~~~vi~~D~~G~G~S~~~~~~------------------------------------------------------- 73 (306)
T TIGR01249 49 FDPETYRIVLFDQRGCGKSTPHACL------------------------------------------------------- 73 (306)
T ss_pred cCccCCEEEEECCCCCCCCCCCCCc-------------------------------------------------------
Confidence 4445799999999999999763210
Q ss_pred cccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 85 IELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 85 ~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
..++.+++++++..+++.+++++++++||||||.+++.++.++|++|+++|++++...
T Consensus 74 ~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 74 EENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 1345578999999999999999999999999999999999999999999999998653
No 41
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.79 E-value=3.8e-18 Score=154.91 Aligned_cols=224 Identities=16% Similarity=0.126 Sum_probs=126.6
Q ss_pred CcchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhc
Q 019157 1 MINSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (345)
Q Consensus 1 ~i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 80 (345)
++..|..+||.|+++|+||||.|.+. .+|....
T Consensus 53 la~~l~~~G~~V~~~D~RGhG~S~r~-------~rg~~~~---------------------------------------- 85 (298)
T COG2267 53 LADDLAARGFDVYALDLRGHGRSPRG-------QRGHVDS---------------------------------------- 85 (298)
T ss_pred HHHHHHhCCCEEEEecCCCCCCCCCC-------CcCCchh----------------------------------------
Confidence 35778999999999999999999730 2233222
Q ss_pred cccccccChHHHHHHHHHHHHHcC----CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcc-hhhH
Q 019157 81 SVKVIELGSDEVGRVLGQVIDTFN----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALN-LPLI 155 (345)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~~l~----~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~-~~~~ 155 (345)
.+++.+++.++++... ..|++|+||||||.|++.++.+++.+|+++|+.+|............ ....
T Consensus 86 --------f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~ 157 (298)
T COG2267 86 --------FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLA 157 (298)
T ss_pred --------HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHh
Confidence 3567888888887654 36999999999999999999999999999999999854321000000 0000
Q ss_pred HHhhhcc-h-hHHHHHHH-HhhhcCC--ChhhHHHHHHHhc-cc--hhHHHHHHHHHhhccccchhhcccccccCCCCEE
Q 019157 156 RDFVLGS-S-FGYQWLIR-FCCMKKV--GSFDVEDNRVLLK-GR--DRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQ 227 (345)
Q Consensus 156 ~~~~~~~-~-~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 227 (345)
...+.+. + ..+..-.. ......+ .....+.+...-. .. .....+........ .........+ ++|+|
T Consensus 158 ~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~----~~~~~~~~~~-~~PvL 232 (298)
T COG2267 158 LKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR----VPALRDAPAI-ALPVL 232 (298)
T ss_pred cccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc----ccchhccccc-cCCEE
Confidence 0000000 0 00000000 0000111 1222233322110 11 11111111222111 1111222333 68999
Q ss_pred EEEecCCCCcc-hHhHHHHHhhC--CCCeEEEE-cCCccccccC-H--HHHHHHHHHHHHcCCc
Q 019157 228 ILWSSVWSKEW-SEEGSRVADAL--PQAKFVGH-SGGRWPQVDS-A--DELAKHIADFVSSLPK 284 (345)
Q Consensus 228 iI~G~~D~D~~-~~~~~~~~~~~--~~~~~~~i-~~GH~~~~e~-p--e~v~~~I~~fl~~~~~ 284 (345)
+++|+.|.-.. .+...++.+.. ++.+++++ ++.|-++.|. . +++.+.|.+|+....+
T Consensus 233 ll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 233 LLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred EEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 99999433333 33444444443 56688999 8999888764 4 7889999999987543
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.76 E-value=1.9e-17 Score=156.11 Aligned_cols=215 Identities=13% Similarity=0.055 Sum_probs=120.2
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++||+|+++|+||||.|+....
T Consensus 156 a~~L~~~Gy~V~~~D~rGhG~S~~~~~----------------------------------------------------- 182 (395)
T PLN02652 156 AKQLTSCGFGVYAMDWIGHGGSDGLHG----------------------------------------------------- 182 (395)
T ss_pred HHHHHHCCCEEEEeCCCCCCCCCCCCC-----------------------------------------------------
Confidence 467888899999999999999976321
Q ss_pred ccccccChHHHHHHHHHHHHHcC----CCcEEEEEeCchHHHHHHHHHHCCC---ccceEEEEeCCCCCCch-hhhc-ch
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFN----LAPVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTGIKPALP-LFAL-NL 152 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~----~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvli~~~~~~~~~-~~~~-~~ 152 (345)
...+.+.+++++.++++.+. ..+++|+||||||.+++.++. +|+ +|+++|+.+|....... .+.. ..
T Consensus 183 ---~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~ 258 (395)
T PLN02652 183 ---YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVA 258 (395)
T ss_pred ---CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHH
Confidence 01233567777777777654 247999999999999998774 664 89999999886421110 0000 00
Q ss_pred hhHHHhhhcchhHHHHHHHHhhhcCCC--hhhHHH-HHHHhccchhH--HHHHHHHHhhccccchhhcccccccCCCCEE
Q 019157 153 PLIRDFVLGSSFGYQWLIRFCCMKKVG--SFDVED-NRVLLKGRDRC--RAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQ 227 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 227 (345)
+.+...... ..+..... ...... ...... +...+...... .......+... .....+..+ ++|+|
T Consensus 259 ~l~~~~~p~--~~~~~~~~--~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~-----~l~~~L~~I-~vPvL 328 (395)
T PLN02652 259 PIFSLVAPR--FQFKGANK--RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISS-----YLTRNFKSV-TVPFM 328 (395)
T ss_pred HHHHHhCCC--CcccCccc--ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHH-----HHHhhcccC-CCCEE
Confidence 000000000 00000000 000000 001100 10001000000 00111111100 011223445 59999
Q ss_pred EEEecCCCCcchHhHHHHHhhCCC--CeEEEE-cCCcccccc-CHHHHHHHHHHHHHcCC
Q 019157 228 ILWSSVWSKEWSEEGSRVADALPQ--AKFVGH-SGGRWPQVD-SADELAKHIADFVSSLP 283 (345)
Q Consensus 228 iI~G~~D~D~~~~~~~~~~~~~~~--~~~~~i-~~GH~~~~e-~pe~v~~~I~~fl~~~~ 283 (345)
+|+|+.|.-...+.++.+.+.+++ .+++++ +++|.++.| .++++.+.|.+||....
T Consensus 329 Ii~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 329 VLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred EEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 999994444444778888777643 678888 889998776 79999999999998643
No 43
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.76 E-value=2e-17 Score=149.17 Aligned_cols=204 Identities=16% Similarity=0.103 Sum_probs=111.8
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+++||+|+++|+||||.|+...
T Consensus 50 a~~l~~~G~~v~~~Dl~G~G~S~~~~------------------------------------------------------ 75 (274)
T TIGR03100 50 ARRLAEAGFPVLRFDYRGMGDSEGEN------------------------------------------------------ 75 (274)
T ss_pred HHHHHHCCCEEEEeCCCCCCCCCCCC------------------------------------------------------
Confidence 46788899999999999999986521
Q ss_pred ccccccChHHHHHHHHHHHHHc-----CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHH
Q 019157 82 VKVIELGSDEVGRVLGQVIDTF-----NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIR 156 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l-----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~ 156 (345)
++.+++.+++.++++.+ +.++++++||||||.+++.+|.. +.+|+++|+++|......... ...+.
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~---~~~~~ 146 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQA---ASRIR 146 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccch---HHHHH
Confidence 11123344444444433 56789999999999999999865 568999999998743211100 00011
Q ss_pred HhhhcchhHHHHHHHHhhhcCCChhh-HHHHHHH---hccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEec
Q 019157 157 DFVLGSSFGYQWLIRFCCMKKVGSFD-VEDNRVL---LKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSS 232 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~ 232 (345)
..... ......++........+... ...+... .......... ..........+..+ ++|+++++|+
T Consensus 147 ~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~-~~P~ll~~g~ 216 (274)
T TIGR03100 147 HYYLG-QLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAH--------GGLAERMKAGLERF-QGPVLFILSG 216 (274)
T ss_pred HHHHH-HHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCccc--------chHHHHHHHHHHhc-CCcEEEEEcC
Confidence 10000 00000111100101111100 0001000 0000000000 00111112223444 5899999999
Q ss_pred CCCCcchH-hH------HHHHhhC--CCCeEEEE-cCCcccc-ccCHHHHHHHHHHHHH
Q 019157 233 VWSKEWSE-EG------SRVADAL--PQAKFVGH-SGGRWPQ-VDSADELAKHIADFVS 280 (345)
Q Consensus 233 ~D~D~~~~-~~------~~~~~~~--~~~~~~~i-~~GH~~~-~e~pe~v~~~I~~fl~ 280 (345)
.|.... .. ..+.+.+ ++.+++++ +++|++. .+.++++.+.|.+||+
T Consensus 217 --~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 217 --NDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred --cchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 666552 21 4455545 78899999 8999984 4556999999999996
No 44
>PLN02511 hydrolase
Probab=99.74 E-value=9.4e-18 Score=158.43 Aligned_cols=63 Identities=14% Similarity=0.240 Sum_probs=49.8
Q ss_pred ccccCCCCEEEEEecCCCCcch--HhH-HHHHhhCCCCeEEEE-cCCccccccCHHH------HHHHHHHHHHcCC
Q 019157 218 SEGIKGIPMQILWSSVWSKEWS--EEG-SRVADALPQAKFVGH-SGGRWPQVDSADE------LAKHIADFVSSLP 283 (345)
Q Consensus 218 ~~~~~~~PvliI~G~~D~D~~~--~~~-~~~~~~~~~~~~~~i-~~GH~~~~e~pe~------v~~~I~~fl~~~~ 283 (345)
+..+ ++|+|+|+|+ .|.++ +.. ..+.+.+|+++++++ ++||+.++|.|+. +.+.|.+||+.+.
T Consensus 294 L~~I-~vPtLiI~g~--dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 294 IKHV-RVPLLCIQAA--NDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred hccC-CCCeEEEEcC--CCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 3455 5899999999 56554 322 456778899999999 8999999999976 4899999998654
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.74 E-value=4.7e-17 Score=161.78 Aligned_cols=61 Identities=16% Similarity=0.245 Sum_probs=51.2
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEEcCCccccccCHHHHHHHHHHHHHcCC
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQVDSADELAKHIADFVSSLP 283 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~~~~ 283 (345)
++|+++|+|++|.-......+.+.+.+++.+++++++||++++|+|+++++.|.+|+....
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred cCceEEEEeCCCcccCHHHhccccccCCcceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 6999999999433333467778888888888888888999999999999999999998754
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.72 E-value=6.8e-16 Score=137.13 Aligned_cols=188 Identities=16% Similarity=0.189 Sum_probs=112.7
Q ss_pred cChHHHHHHHHHHHHHcC----CCcEEEEEeCchH-HHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhh--
Q 019157 87 LGSDEVGRVLGQVIDTFN----LAPVHLVLHDSAL-PMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFV-- 159 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l~----~~~~~lvGhS~Gg-~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~-- 159 (345)
++.+.+++++..+++..+ ..++.|+|||||| .+++..+..+|+.+.++|+++-.+.............+..+.
T Consensus 100 h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~ 179 (315)
T KOG2382|consen 100 HNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQL 179 (315)
T ss_pred cCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhc
Confidence 345789999999999774 5799999999999 888888899999999999999764211110000000000000
Q ss_pred -------hcchhHHHHHHHHhhhcCCChhhHHHHHHHhc---------cchhHHHHHHHHHhhccccchhhccccc-ccC
Q 019157 160 -------LGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLK---------GRDRCRAVSEMGRKLNNSFDMAEWGSSE-GIK 222 (345)
Q Consensus 160 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 222 (345)
.++....+.+..... +..........+. ...+.......+..+. ....|..+. .-.
T Consensus 180 d~~~~~~~~rke~~~~l~~~~~----d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~---~~s~~~~l~~~~~ 252 (315)
T KOG2382|consen 180 DLSIGVSRGRKEALKSLIEVGF----DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE---ILSYWADLEDGPY 252 (315)
T ss_pred cccccccccHHHHHHHHHHHhc----chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH---hhccccccccccc
Confidence 111122222222111 1111111111111 1111222222222211 111122221 112
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
+.||++|.|.++.-.+.+.-.++.+.+|+++++.+ ++|||+++|+|+++.+.|.+|+..
T Consensus 253 ~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 253 TGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred ccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 57999999996544545778899999999999999 699999999999999999999875
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.71 E-value=1.3e-16 Score=147.65 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=45.3
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhC--CCCeEEEE-cCCccccccC-HHHHHHHHHHHHH
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADAL--PQAKFVGH-SGGRWPQVDS-ADELAKHIADFVS 280 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~--~~~~~~~i-~~GH~~~~e~-pe~v~~~I~~fl~ 280 (345)
++|+|+|+|+.|.-...+.++.+.+.. ++.+++++ +++|.++.|. ++++.+.|.+||.
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 589999999943333336677776654 56788889 8899999875 7999999999985
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.71 E-value=7.2e-16 Score=146.45 Aligned_cols=193 Identities=12% Similarity=0.062 Sum_probs=117.3
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+++||+|+++|+||+|.|.....
T Consensus 215 ~~~La~~Gy~vl~~D~pG~G~s~~~~~----------------------------------------------------- 241 (414)
T PRK05077 215 RDYLAPRGIAMLTIDMPSVGFSSKWKL----------------------------------------------------- 241 (414)
T ss_pred HHHHHhCCCEEEEECCCCCCCCCCCCc-----------------------------------------------------
Confidence 457889999999999999999865210
Q ss_pred ccccccChHHHHHHHHHHHHHc---CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDF 158 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l---~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 158 (345)
......+...+.+.+... +.+++.++||||||.+++.+|..+|++|+++|+++++....+... . .
T Consensus 242 ----~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~-----~---~ 309 (414)
T PRK05077 242 ----TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP-----K---R 309 (414)
T ss_pred ----cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcch-----h---h
Confidence 001123344555555544 557899999999999999999999999999999988752211100 0 0
Q ss_pred hhcchhHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccc-cccCCCCEEEEEecCCCCc
Q 019157 159 VLGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSS-EGIKGIPMQILWSSVWSKE 237 (345)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~PvliI~G~~D~D~ 237 (345)
....+......+..... .+....... ...+..+.. .....+ .++ ++|+|+|+|+.|.-.
T Consensus 310 ~~~~p~~~~~~la~~lg--~~~~~~~~l-------------~~~l~~~sl----~~~~~l~~~i-~~PvLiI~G~~D~iv 369 (414)
T PRK05077 310 QQQVPEMYLDVLASRLG--MHDASDEAL-------------RVELNRYSL----KVQGLLGRRC-PTPMLSGYWKNDPFS 369 (414)
T ss_pred hhhchHHHHHHHHHHhC--CCCCChHHH-------------HHHhhhccc----hhhhhhccCC-CCcEEEEecCCCCCC
Confidence 00000111111110000 010011111 111111110 000001 233 589999999944444
Q ss_pred chHhHHHHHhhCCCCeEEEEcCCccccccCHHHHHHHHHHHHHc
Q 019157 238 WSEEGSRVADALPQAKFVGHSGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
+.+.++.+.+..+++++++++.. ++.+.++++++.|.+||.+
T Consensus 370 P~~~a~~l~~~~~~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 370 PEEDSRLIASSSADGKLLEIPFK--PVYRNFDKALQEISDWLED 411 (414)
T ss_pred CHHHHHHHHHhCCCCeEEEccCC--CccCCHHHHHHHHHHHHHH
Confidence 44788888999999999999433 6778999999999999975
No 49
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.68 E-value=2.7e-16 Score=129.10 Aligned_cols=171 Identities=12% Similarity=0.082 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch--hhhcchhhHHHhhhcchhHHHHH
Q 019157 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP--LFALNLPLIRDFVLGSSFGYQWL 169 (345)
Q Consensus 92 ~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 169 (345)
=+++...+++.|..+++.|+|+|=||..++..|+++++.|.++|+++....-... .....+.....+..+...-++
T Consensus 100 Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e-- 177 (277)
T KOG2984|consen 100 DAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYE-- 177 (277)
T ss_pred hHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHH--
Confidence 3566678889999999999999999999999999999999999999987532111 000011111111100000000
Q ss_pred HHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchh-hcccccccCCCCEEEEEecCCCCcch--HhHHHHH
Q 019157 170 IRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMA-EWGSSEGIKGIPMQILWSSVWSKEWS--EEGSRVA 246 (345)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~PvliI~G~~D~D~~~--~~~~~~~ 246 (345)
..--.+.++..+. +......++....+-. -...++++ +||++|++|. .|+++ ..+..+.
T Consensus 178 ---------~~Yg~e~f~~~wa------~wvD~v~qf~~~~dG~fCr~~lp~v-kcPtli~hG~--kDp~~~~~hv~fi~ 239 (277)
T KOG2984|consen 178 ---------DHYGPETFRTQWA------AWVDVVDQFHSFCDGRFCRLVLPQV-KCPTLIMHGG--KDPFCGDPHVCFIP 239 (277)
T ss_pred ---------HhcCHHHHHHHHH------HHHHHHHHHhhcCCCchHhhhcccc-cCCeeEeeCC--cCCCCCCCCccchh
Confidence 0000111111111 1111111111111111 11223555 5999999999 78777 6778888
Q ss_pred hhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHcC
Q 019157 247 DALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSSL 282 (345)
Q Consensus 247 ~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~ 282 (345)
...+.+++.++ +++|.+++.-+++|+..+.+||++.
T Consensus 240 ~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 240 VLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 88999999999 9999999999999999999999864
No 50
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.68 E-value=3.4e-15 Score=139.44 Aligned_cols=223 Identities=15% Similarity=0.108 Sum_probs=123.6
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++||+|+++|++|+|.|+..... .
T Consensus 87 ~~~L~~~G~~V~~~D~~g~g~s~~~~~~-------------~-------------------------------------- 115 (350)
T TIGR01836 87 VRGLLERGQDVYLIDWGYPDRADRYLTL-------------D-------------------------------------- 115 (350)
T ss_pred HHHHHHCCCeEEEEeCCCCCHHHhcCCH-------------H--------------------------------------
Confidence 5678899999999999999987642110 0
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCch-----hhhcc--hhh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-----LFALN--LPL 154 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~-----~~~~~--~~~ 154 (345)
+|..+++.+.+..+++..+.++++++||||||.+++.++..+|++|+++|+++++...... .+... ...
T Consensus 116 ----d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 116 ----DYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred ----HHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 1111345566677777788899999999999999999999999999999999987532111 00000 000
Q ss_pred HHHhhhcc-hhH--------------HHHHHHHhhhcCCChhhHHHHHH---Hhcc--chhHHHHHHHHHhhcccc--ch
Q 019157 155 IRDFVLGS-SFG--------------YQWLIRFCCMKKVGSFDVEDNRV---LLKG--RDRCRAVSEMGRKLNNSF--DM 212 (345)
Q Consensus 155 ~~~~~~~~-~~~--------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~--~~ 212 (345)
........ ... ...+..... ....++.+..+.. .... ......+..++..+.... ..
T Consensus 192 ~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~ 270 (350)
T TIGR01836 192 AVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVD-ILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLIN 270 (350)
T ss_pred HHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHH-hcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccC
Confidence 00000000 000 111111000 0011122222221 0010 111122222222221100 00
Q ss_pred hh------cccccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCC--eEEEEcCCccccccC---HHHHHHHHHHHHHc
Q 019157 213 AE------WGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA--KFVGHSGGRWPQVDS---ADELAKHIADFVSS 281 (345)
Q Consensus 213 ~~------~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~--~~~~i~~GH~~~~e~---pe~v~~~I~~fl~~ 281 (345)
.. ...+..+ ++|+++++|+.|.-...+..+.+.+.+++. +++++++||+.++.. ++++.+.|.+||.+
T Consensus 271 g~~~~~~~~~~l~~i-~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 271 GEVEIGGRKVDLKNI-KMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeeEECCEEccHHhC-CCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 00 1123344 589999999943333347778888888754 444558999887664 47899999999875
No 51
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.67 E-value=3.9e-15 Score=143.99 Aligned_cols=211 Identities=15% Similarity=-0.005 Sum_probs=120.7
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++||+|+++|++|+|.|.+... .
T Consensus 213 v~~L~~qGf~V~~iDwrgpg~s~~~~~-------------~--------------------------------------- 240 (532)
T TIGR01838 213 VRWLVEQGHTVFVISWRNPDASQADKT-------------F--------------------------------------- 240 (532)
T ss_pred HHHHHHCCcEEEEEECCCCCcccccCC-------------h---------------------------------------
Confidence 567888999999999999998866321 0
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHH----HHHHHC-CCccceEEEEeCCCCCCch----hhhc--
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSA----NWVAEN-PGSVKSLTLLDTGIKPALP----LFAL-- 150 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~----~~A~~~-p~~v~~lvli~~~~~~~~~----~~~~-- 150 (345)
.+|..+.+.+++..+++.++.++++++||||||.++. .+++.. |++|+++|++++......+ .+..
T Consensus 241 ---ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~ 317 (532)
T TIGR01838 241 ---DDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEE 317 (532)
T ss_pred ---hhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCch
Confidence 1334467888899999999999999999999999852 355665 7899999999987432111 0000
Q ss_pred chhhHHHhhhc------------------chhHHHHHHHHhhh-cCCChhhHHHHHHHhccchhHHHHHHHHHhhccccc
Q 019157 151 NLPLIRDFVLG------------------SSFGYQWLIRFCCM-KKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFD 211 (345)
Q Consensus 151 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (345)
....+...... .......++..... ......++..+.... ..-.......+++.+.....
T Consensus 318 ~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~-t~lP~~~~~~~lr~ly~~N~ 396 (532)
T TIGR01838 318 IVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDS-TNLPGKMHNFYLRNLYLQNA 396 (532)
T ss_pred hHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccC-ccchHHHHHHHHHHHHhcCC
Confidence 00011111110 00111111211111 100111111111100 01111222233333221111
Q ss_pred h--h------hcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHH
Q 019157 212 M--A------EWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSAD 269 (345)
Q Consensus 212 ~--~------~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe 269 (345)
. . ....+..+ ++|+++|+|+.|.-...+.+..+.+.+++.+.+++ ++||.+++++|.
T Consensus 397 L~~G~~~v~g~~~dL~~I-~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 397 LTTGGLEVCGVRLDLSKV-KVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CcCCeeEECCEecchhhC-CCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 1 1 11233444 58999999994443434788888999999998888 899999999874
No 52
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.65 E-value=1.2e-14 Score=121.56 Aligned_cols=197 Identities=11% Similarity=0.097 Sum_probs=126.2
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
.+.|.++||.|++|-+||||......
T Consensus 35 gr~L~e~GyTv~aP~ypGHG~~~e~f------------------------------------------------------ 60 (243)
T COG1647 35 GRYLNENGYTVYAPRYPGHGTLPEDF------------------------------------------------------ 60 (243)
T ss_pred HHHHHHCCceEecCCCCCCCCCHHHH------------------------------------------------------
Confidence 46788999999999999999764311
Q ss_pred ccccccChHHHHHHHHHHHH---HcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHh
Q 019157 82 VKVIELGSDEVGRVLGQVID---TFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDF 158 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~---~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 158 (345)
...+.+++.+++.+..+ ..+.+.+.++|-||||.+++.+|..+| ++++|.++++..... |......
T Consensus 61 ---l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~--~~~iie~---- 129 (243)
T COG1647 61 ---LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKS--WRIIIEG---- 129 (243)
T ss_pred ---hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccccc--chhhhHH----
Confidence 13455666666655544 456789999999999999999999999 899999998753211 1111111
Q ss_pred hhcchhHHHHHHHHh-hhcCCChhhHHHHHHHhccc--hhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCC
Q 019157 159 VLGSSFGYQWLIRFC-CMKKVGSFDVEDNRVLLKGR--DRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWS 235 (345)
Q Consensus 159 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~ 235 (345)
++. +++.. .....+.+.+......+... .....+...++... ..+..+ .+|++|+.|. .
T Consensus 130 ------~l~-y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~I-~~pt~vvq~~--~ 191 (243)
T COG1647 130 ------LLE-YFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDAR--------RSLDKI-YSPTLVVQGR--Q 191 (243)
T ss_pred ------HHH-HHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHH--------hhhhhc-ccchhheecc--c
Confidence 011 11111 12334455555555544421 11112222222111 222444 4799999999 6
Q ss_pred Ccch--HhHHHHHhhCCC--CeEEEE-cCCcccccc-CHHHHHHHHHHHHHc
Q 019157 236 KEWS--EEGSRVADALPQ--AKFVGH-SGGRWPQVD-SADELAKHIADFVSS 281 (345)
Q Consensus 236 D~~~--~~~~~~~~~~~~--~~~~~i-~~GH~~~~e-~pe~v~~~I~~fl~~ 281 (345)
|.++ +.+..+.+.+-. -++.++ ++||.+-.+ ..+.+.+.+..||+.
T Consensus 192 D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 192 DEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 6665 778888777632 378888 899987655 578999999999963
No 53
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.65 E-value=1.1e-15 Score=133.80 Aligned_cols=213 Identities=13% Similarity=0.040 Sum_probs=122.0
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
+..|++.||.|+++|++|||.|+.-.. +-.
T Consensus 75 a~~l~~~g~~v~a~D~~GhG~SdGl~~------------------------yi~-------------------------- 104 (313)
T KOG1455|consen 75 AKRLAKSGFAVYAIDYEGHGRSDGLHA------------------------YVP-------------------------- 104 (313)
T ss_pred HHHHHhCCCeEEEeeccCCCcCCCCcc------------------------cCC--------------------------
Confidence 457889999999999999999997321 011
Q ss_pred ccccccChHHHHHHHHHHHHHc------CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCc---hhhh--c
Q 019157 82 VKVIELGSDEVGRVLGQVIDTF------NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL---PLFA--L 150 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l------~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~---~~~~--~ 150 (345)
+++.+++|+...++.. ..-|..|.||||||+|++.++.+.|+...++|+++|...-.. +.+. .
T Consensus 105 ------~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~ 178 (313)
T KOG1455|consen 105 ------SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS 178 (313)
T ss_pred ------cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH
Confidence 2245666666665532 224899999999999999999999999999999999853211 1111 1
Q ss_pred chhhHHHhhhcchhHHHHHHHHhhhcCCChhhHHHHHH--Hhcc--chhHHHHHHHHHhhccccchhhcccccccCCCCE
Q 019157 151 NLPLIRDFVLGSSFGYQWLIRFCCMKKVGSFDVEDNRV--LLKG--RDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPM 226 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv 226 (345)
..+.+..++-+....-.+- .......+.+...... .+.. ....+.....++... .....+.++ ++|.
T Consensus 179 ~l~~l~~liP~wk~vp~~d---~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~-----~le~~l~~v-tvPf 249 (313)
T KOG1455|consen 179 ILTLLSKLIPTWKIVPTKD---IIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA-----DLEKNLNEV-TVPF 249 (313)
T ss_pred HHHHHHHhCCceeecCCcc---ccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHH-----HHHHhcccc-cccE
Confidence 1111111111100000000 0000011111111111 1111 111222223332211 111222444 5999
Q ss_pred EEEEecCCCCcch--HhHHHHHhhCCC--CeEEEE-cCCccccc----cCHHHHHHHHHHHHHc
Q 019157 227 QILWSSVWSKEWS--EEGSRVADALPQ--AKFVGH-SGGRWPQV----DSADELAKHIADFVSS 281 (345)
Q Consensus 227 liI~G~~D~D~~~--~~~~~~~~~~~~--~~~~~i-~~GH~~~~----e~pe~v~~~I~~fl~~ 281 (345)
+|++|+ .|.+. +.++.+.+..+. -++..+ +.=|.++. |+-+.|...|.+||++
T Consensus 250 lilHG~--dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 250 LILHGT--DDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred EEEecC--CCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 999999 56555 778888887654 367777 66897774 3456788899999975
No 54
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.63 E-value=3.8e-14 Score=124.80 Aligned_cols=188 Identities=16% Similarity=0.182 Sum_probs=118.3
Q ss_pred ChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC-CchhhhcchhhHHHhhh--c-ch
Q 019157 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP-ALPLFALNLPLIRDFVL--G-SS 163 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~-~~~~~~~~~~~~~~~~~--~-~~ 163 (345)
++++++++|..++++++++.++-+|--.|+.|..++|..+|++|.++||+++.... .+-.|.. .......+. + ..
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~-~K~~~~~L~~~gmt~ 159 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFY-QKLSSWLLYSYGMTS 159 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHH-HHHH-------CTTS
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHH-HHHhccccccccccc
Confidence 56889999999999999999999999999999999999999999999999998643 2222221 111111111 1 11
Q ss_pred hHHHHHHHHhhhc---CCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchH
Q 019157 164 FGYQWLIRFCCMK---KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSE 240 (345)
Q Consensus 164 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~ 240 (345)
...+.++...+.. ....+.+..++..+....+......++.++..+.+..... ... .||+|+|.|+ .....+
T Consensus 160 ~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~--~~~-~c~vLlvvG~--~Sp~~~ 234 (283)
T PF03096_consen 160 SVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIER--PSL-GCPVLLVVGD--NSPHVD 234 (283)
T ss_dssp -HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SEC--TTC-CS-EEEEEET--TSTTHH
T ss_pred chHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhc--CCC-CCCeEEEEec--CCcchh
Confidence 2222222222211 1234466778887777666677777887776654443322 333 4999999999 677777
Q ss_pred hHHHHHhhCC--CCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 241 EGSRVADALP--QAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 241 ~~~~~~~~~~--~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
....+.+++. ...++.+ +||=.+..|+|+++++.++-||+-
T Consensus 235 ~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 235 DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 7777777773 3477778 899999999999999999999975
No 55
>PRK10985 putative hydrolase; Provisional
Probab=99.61 E-value=6.3e-15 Score=136.16 Aligned_cols=218 Identities=11% Similarity=0.109 Sum_probs=115.0
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|.++||+|+++|+||||.|..... . .|.
T Consensus 80 ~~~l~~~G~~v~~~d~rG~g~~~~~~~--~------------~~~----------------------------------- 110 (324)
T PRK10985 80 LEAAQKRGWLGVVMHFRGCSGEPNRLH--R------------IYH----------------------------------- 110 (324)
T ss_pred HHHHHHCCCEEEEEeCCCCCCCccCCc--c------------eEC-----------------------------------
Confidence 456888999999999999997743110 0 000
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCc--cceEEEEeCCCCCCchhhhcchh---hHH
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS--VKSLTLLDTGIKPALPLFALNLP---LIR 156 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~--v~~lvli~~~~~~~~~~~~~~~~---~~~ 156 (345)
.-..+++...+..+.+.++..+++++||||||.+++.++.++++. |.++|+++++............. ...
T Consensus 111 ----~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~ 186 (324)
T PRK10985 111 ----SGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQ 186 (324)
T ss_pred ----CCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHH
Confidence 011255666666666667878999999999999999888887654 89999998864211000000000 000
Q ss_pred Hhhh-cchhHHHHHHHHhhhc-CCChhhH------HHHHHHhccc-hhHHHHHHHHHhhccccchhhcccccccCCCCEE
Q 019157 157 DFVL-GSSFGYQWLIRFCCMK-KVGSFDV------EDNRVLLKGR-DRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQ 227 (345)
Q Consensus 157 ~~~~-~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 227 (345)
..+. ................ ..+.+.+ .++-.....+ ........++.... ....+..+ ++|++
T Consensus 187 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~------~~~~l~~i-~~P~l 259 (324)
T PRK10985 187 RYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCS------ALPLLNQI-RKPTL 259 (324)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCC------hHHHHhCC-CCCEE
Confidence 0000 0000000000000000 0011001 0000000000 00111112222111 11222444 58999
Q ss_pred EEEecCCCCcch--HhHHHHHhhCCCCeEEEE-cCCccccccCH-----HHHHHHHHHHHHc
Q 019157 228 ILWSSVWSKEWS--EEGSRVADALPQAKFVGH-SGGRWPQVDSA-----DELAKHIADFVSS 281 (345)
Q Consensus 228 iI~G~~D~D~~~--~~~~~~~~~~~~~~~~~i-~~GH~~~~e~p-----e~v~~~I~~fl~~ 281 (345)
+|+|+ .|.++ +....+.+..++++++++ ++||+.++|.. --.-+.+.+|+..
T Consensus 260 ii~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 260 IIHAK--DDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred EEecC--CCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 99999 56554 555666777888888888 89999998742 2355667777754
No 56
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.60 E-value=1.2e-13 Score=119.98 Aligned_cols=192 Identities=15% Similarity=0.120 Sum_probs=136.4
Q ss_pred ChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC-CchhhhcchhhHHHhhhc--c-h
Q 019157 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP-ALPLFALNLPLIRDFVLG--S-S 163 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~-~~~~~~~~~~~~~~~~~~--~-~ 163 (345)
+.++++++|..++++++++.++-+|--.|+.|..++|..||++|.+||||++.+.. .+-.|. ........+.. . .
T Consensus 104 smd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~-~~K~~s~~l~~~Gmt~ 182 (326)
T KOG2931|consen 104 SMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWA-YNKVSSNLLYYYGMTQ 182 (326)
T ss_pred CHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHH-HHHHHHHHHHhhchhh
Confidence 55899999999999999999999999999999999999999999999999987532 222232 11222222211 1 1
Q ss_pred hHHHHHHHHhhhc---CCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhccc-ccccCCCCEEEEEecCCCCcch
Q 019157 164 FGYQWLIRFCCMK---KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGS-SEGIKGIPMQILWSSVWSKEWS 239 (345)
Q Consensus 164 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~PvliI~G~~D~D~~~ 239 (345)
...+-++...+.+ ....+.+.+|+..+....+......++.+++.+.+...-+. ...-.+||++++.|+ .....
T Consensus 183 ~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd--~Sp~~ 260 (326)
T KOG2931|consen 183 GVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGD--NSPHV 260 (326)
T ss_pred hHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecC--CCchh
Confidence 1222222222221 12456678888888887777788888888877655443221 111225999999999 66666
Q ss_pred HhHHHHHhhC--CCCeEEEE-cCCccccccCHHHHHHHHHHHHHcC
Q 019157 240 EEGSRVADAL--PQAKFVGH-SGGRWPQVDSADELAKHIADFVSSL 282 (345)
Q Consensus 240 ~~~~~~~~~~--~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~ 282 (345)
+....+...+ .+..++.+ +||=.+.+++|.++++.+.-||+-.
T Consensus 261 ~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 261 SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 6666777766 34578888 9999999999999999999999853
No 57
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.56 E-value=9e-14 Score=121.70 Aligned_cols=53 Identities=21% Similarity=0.290 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
..+++++..+++.++..+++++||||||.+++.++.++|++++++|++++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 72 SAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 34589999999999999999999999999999999999999999999998753
No 58
>PLN02872 triacylglycerol lipase
Probab=99.51 E-value=4.4e-13 Score=126.17 Aligned_cols=59 Identities=14% Similarity=0.299 Sum_probs=47.7
Q ss_pred CCCEEEEEecCCCCcch--HhHHHHHhhCCC-CeEEEE-cCCcc---ccccCHHHHHHHHHHHHHcCC
Q 019157 223 GIPMQILWSSVWSKEWS--EEGSRVADALPQ-AKFVGH-SGGRW---PQVDSADELAKHIADFVSSLP 283 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~--~~~~~~~~~~~~-~~~~~i-~~GH~---~~~e~pe~v~~~I~~fl~~~~ 283 (345)
++|+++++|+ .|.+. +..+.+.+.+++ .+++.+ ++||. ...+.|+++.+.|.+|+++..
T Consensus 325 ~~Pv~i~~G~--~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 325 SLPLWMGYGG--TDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CccEEEEEcC--CCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 4799999999 55554 677888888887 577778 88995 455889999999999998643
No 59
>PRK13604 luxD acyl transferase; Provisional
Probab=99.51 E-value=2.6e-13 Score=121.83 Aligned_cols=84 Identities=18% Similarity=0.216 Sum_probs=58.4
Q ss_pred cchhhccCceEEEeeCCCC-CCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhc
Q 019157 2 INSLRSKKFNVIAVDLPGN-GFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~-G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 80 (345)
++.|+++||.|+.+|.+|+ |.|+..... ++
T Consensus 57 A~~La~~G~~vLrfD~rg~~GeS~G~~~~---------------~t---------------------------------- 87 (307)
T PRK13604 57 AEYLSSNGFHVIRYDSLHHVGLSSGTIDE---------------FT---------------------------------- 87 (307)
T ss_pred HHHHHHCCCEEEEecCCCCCCCCCCcccc---------------Cc----------------------------------
Confidence 5679999999999999987 999763210 00
Q ss_pred cccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 81 SVKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
..+..+|+...+..+ +..+.+++.|+||||||.+++..|... .++.+|+.+|..
T Consensus 88 ----~s~g~~Dl~aaid~l-k~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~ 141 (307)
T PRK13604 88 ----MSIGKNSLLTVVDWL-NTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVV 141 (307)
T ss_pred ----ccccHHHHHHHHHHH-HhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcc
Confidence 122234444444333 344667999999999999997777643 388888888764
No 60
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.51 E-value=1.3e-12 Score=113.76 Aligned_cols=84 Identities=14% Similarity=0.274 Sum_probs=73.7
Q ss_pred CcchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhc
Q 019157 1 MINSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (345)
Q Consensus 1 ~i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 80 (345)
+.+.|.+.|.|+|.+.+||+|.++.+..
T Consensus 54 i~~~l~~~~iR~I~iN~PGf~~t~~~~~---------------------------------------------------- 81 (297)
T PF06342_consen 54 IRPPLDEAGIRFIGINYPGFGFTPGYPD---------------------------------------------------- 81 (297)
T ss_pred hhhHHHHcCeEEEEeCCCCCCCCCCCcc----------------------------------------------------
Confidence 3567889999999999999999988543
Q ss_pred cccccccChHHHHHHHHHHHHHcCCC-cEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 81 SVKVIELGSDEVGRVLGQVIDTFNLA-PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~~l~~~-~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
..|+-++-..-+.++++.++++ +++.+|||.|+-.|+.+|..+| +.++++++|++.
T Consensus 82 ----~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 82 ----QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred ----cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 3566689999999999999985 7889999999999999999996 679999999874
No 61
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=7.3e-13 Score=119.55 Aligned_cols=195 Identities=14% Similarity=0.088 Sum_probs=120.1
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEE-EEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCc----------------hhh
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVH-LVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL----------------PLF 148 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~-lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~----------------~~~ 148 (345)
.++++|+++.-..++++||++++. +||-||||+.++.|+..||++|+++|.+++...... |.|
T Consensus 126 ~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~ 205 (368)
T COG2021 126 VITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDW 205 (368)
T ss_pred cccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCc
Confidence 578899999999999999999988 999999999999999999999999999998754211 111
Q ss_pred hcc------hh----hHHHhh----hcchhHHHHHHHHhh-hcCCC----hhhHHHHHHHh----ccchhHHHHHHHHHh
Q 019157 149 ALN------LP----LIRDFV----LGSSFGYQWLIRFCC-MKKVG----SFDVEDNRVLL----KGRDRCRAVSEMGRK 205 (345)
Q Consensus 149 ~~~------~~----~~~~~~----~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~ 205 (345)
..+ .| .+.+++ ......++..+.... ..... ...++.|.... ...-..+.++...++
T Consensus 206 n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~a 285 (368)
T COG2021 206 NGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRA 285 (368)
T ss_pred cCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHH
Confidence 000 00 001111 011111221111100 01111 22344443321 111122333333333
Q ss_pred hcccc---chh-hcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCCe-EEEE--cCCccccccCHHHHHHHHHHH
Q 019157 206 LNNSF---DMA-EWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAK-FVGH--SGGRWPQVDSADELAKHIADF 278 (345)
Q Consensus 206 ~~~~~---~~~-~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~-~~~i--~~GH~~~~e~pe~v~~~I~~f 278 (345)
++... ... ....+.+++ +|++++.-+.|.-.+.+..+.+.+.++.+. ++++ +.||--++...+.+...|..|
T Consensus 286 ld~~D~s~~~~~l~~al~~i~-~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~f 364 (368)
T COG2021 286 LDYHDVSRGRGDLTAALARIK-APVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKF 364 (368)
T ss_pred HHhcCCCCCcCcHHHHHhcCc-cCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHH
Confidence 32211 100 112245554 899999999545455588899999998887 8788 569999998889999999999
Q ss_pred HHc
Q 019157 279 VSS 281 (345)
Q Consensus 279 l~~ 281 (345)
|..
T Consensus 365 L~~ 367 (368)
T COG2021 365 LAL 367 (368)
T ss_pred hhc
Confidence 975
No 62
>PRK11071 esterase YqiA; Provisional
Probab=99.47 E-value=1.7e-12 Score=110.48 Aligned_cols=143 Identities=8% Similarity=-0.043 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHHHHH
Q 019157 91 EVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLI 170 (345)
Q Consensus 91 ~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
++++++.++++.++.++++++||||||.+++.+|.++|. ++|+++|+..+ .. .+......
T Consensus 46 ~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-~~-------~~~~~~~~--------- 105 (190)
T PRK11071 46 DAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRP-FE-------LLTDYLGE--------- 105 (190)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCH-HH-------HHHHhcCC---------
Confidence 367888999999999999999999999999999999993 46888886431 00 11000000
Q ss_pred HHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCC
Q 019157 171 RFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALP 250 (345)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~ 250 (345)
.. .....+. +.. ...+....+.+.. .. .. ..+|+++|+|++|+....+.+.++.+
T Consensus 106 --~~-~~~~~~~-------~~~---~~~~~~d~~~~~~-------~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~--- 160 (190)
T PRK11071 106 --NE-NPYTGQQ-------YVL---ESRHIYDLKVMQI-------DP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYA--- 160 (190)
T ss_pred --cc-cccCCCc-------EEE---cHHHHHHHHhcCC-------cc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHH---
Confidence 00 0000000 000 1122222222211 10 11 24789999999655555577777777
Q ss_pred CCeEEEE-cCCccccccCHHHHHHHHHHHHH
Q 019157 251 QAKFVGH-SGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 251 ~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
+++++++ +++|.+ +..+++.+.|.+|+.
T Consensus 161 ~~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 161 ACRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred hcceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 3567788 889977 455889999999975
No 63
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.46 E-value=3.4e-12 Score=134.30 Aligned_cols=76 Identities=21% Similarity=0.239 Sum_probs=56.9
Q ss_pred ccccCCCCEEEEEecCCCCcch--HhHHHHHhhCCCCeE-EEE-cCCcccccc---CHHHHHHHHHHHHHcCCccccccC
Q 019157 218 SEGIKGIPMQILWSSVWSKEWS--EEGSRVADALPQAKF-VGH-SGGRWPQVD---SADELAKHIADFVSSLPKTVRQVE 290 (345)
Q Consensus 218 ~~~~~~~PvliI~G~~D~D~~~--~~~~~~~~~~~~~~~-~~i-~~GH~~~~e---~pe~v~~~I~~fl~~~~~~~~~~~ 290 (345)
+.++ ++|+|+|+|+ .|.++ +.++.+.+.++++++ +++ ++||+.++- .++++...|.+||......
T Consensus 293 L~~i-~~P~L~i~G~--~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~----- 364 (994)
T PRK07868 293 LADI-TCPVLAFVGE--VDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD----- 364 (994)
T ss_pred hhhC-CCCEEEEEeC--CCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC-----
Confidence 4555 5899999999 55554 788899999999987 566 899987654 5788999999999975433
Q ss_pred CCCchhHHHHHH
Q 019157 291 EEPIPEHIQKMF 302 (345)
Q Consensus 291 ~~~~~~~~~~~~ 302 (345)
.+.|+.|..|.
T Consensus 365 -~~~~~~~~~~~ 375 (994)
T PRK07868 365 -GDKPENIHLMA 375 (994)
T ss_pred -CCCCccccccc
Confidence 34555554443
No 64
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.45 E-value=7.2e-14 Score=120.47 Aligned_cols=54 Identities=20% Similarity=0.302 Sum_probs=45.3
Q ss_pred ccChHHHHHHHHHHHHHcC---CCcEEEEEeCchHHHHHHHHHH--CCCccceEEEEeCC
Q 019157 86 ELGSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAE--NPGSVKSLTLLDTG 140 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~---~~~~~lvGhS~Gg~ia~~~A~~--~p~~v~~lvli~~~ 140 (345)
+++.|.+++|+.++++.+- ..+++||||||||.||...|.. -|. +.+|+++|-.
T Consensus 123 dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 123 DLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred hcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 5677999999999998763 3589999999999999988764 455 8999999976
No 65
>PRK10566 esterase; Provisional
Probab=99.43 E-value=2.8e-12 Score=113.81 Aligned_cols=55 Identities=13% Similarity=0.019 Sum_probs=38.5
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCC------CeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQ------AKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~------~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
++|+|+|+|+.|.-...+.++.+.+.++. .+++++ ++||.+. + ...+.+.+||++
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 57999999995444444677777776643 355667 7899763 3 456888888874
No 66
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.40 E-value=1.1e-12 Score=116.82 Aligned_cols=84 Identities=15% Similarity=0.085 Sum_probs=66.1
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
++.|+++||+|+++|+||||.|+....
T Consensus 49 a~~La~~Gy~Vl~~Dl~G~G~S~g~~~----------------------------------------------------- 75 (266)
T TIGR03101 49 ARAFAAGGFGVLQIDLYGCGDSAGDFA----------------------------------------------------- 75 (266)
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCccc-----------------------------------------------------
Confidence 467888899999999999999975321
Q ss_pred ccccccChHHHHHHHHH---HHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 82 VKVIELGSDEVGRVLGQ---VIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~---ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
..+.+.+.+++.+ +++..+..+++|+||||||.+++.+|.++|++++++|+++|...
T Consensus 76 ----~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 76 ----AARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred ----cCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 1122345555444 44556778999999999999999999999999999999998653
No 67
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.39 E-value=1.6e-11 Score=106.41 Aligned_cols=154 Identities=9% Similarity=-0.005 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHcC--CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHH
Q 019157 90 DEVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQ 167 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~--~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (345)
+|+.+.+..+++.-. .+++.|+|+|+||.+++.++.++|++++++|..++........ .... .+..
T Consensus 46 ~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~---~~~~---------~~~~ 113 (213)
T PF00326_consen 46 DDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYY---GTTD---------IYTK 113 (213)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSB---HHTC---------CHHH
T ss_pred hhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeeeeccceecchhccc---cccc---------cccc
Confidence 566666666666543 3689999999999999999999999999999888764211110 0000 0000
Q ss_pred -HHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhccccccc-CCCCEEEEEecCCCCcchHhHHHH
Q 019157 168 -WLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGI-KGIPMQILWSSVWSKEWSEEGSRV 245 (345)
Q Consensus 168 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~PvliI~G~~D~D~~~~~~~~~ 245 (345)
.... . ..+.... ........+.. . ..+ .++|+|+++|+.|...+.+.+..+
T Consensus 114 ~~~~~--~--~~~~~~~--------------~~~~~~s~~~~---~------~~~~~~~P~li~hG~~D~~Vp~~~s~~~ 166 (213)
T PF00326_consen 114 AEYLE--Y--GDPWDNP--------------EFYRELSPISP---A------DNVQIKPPVLIIHGENDPRVPPSQSLRL 166 (213)
T ss_dssp GHHHH--H--SSTTTSH--------------HHHHHHHHGGG---G------GGCGGGSEEEEEEETTBSSSTTHHHHHH
T ss_pred ccccc--c--Cccchhh--------------hhhhhhccccc---c------ccccCCCCEEEEccCCCCccCHHHHHHH
Confidence 0000 0 0000000 11111111111 0 110 248999999995554544544444
Q ss_pred Hh----hCCCCeEEEE-cCCcccc-ccCHHHHHHHHHHHHHcC
Q 019157 246 AD----ALPQAKFVGH-SGGRWPQ-VDSADELAKHIADFVSSL 282 (345)
Q Consensus 246 ~~----~~~~~~~~~i-~~GH~~~-~e~pe~v~~~I~~fl~~~ 282 (345)
.+ .-...+++++ ++||.+. .+...++.+.+.+|+++.
T Consensus 167 ~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 167 YNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp HHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 44 3344788888 8899554 455567889999998764
No 68
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.35 E-value=5.9e-11 Score=101.59 Aligned_cols=174 Identities=9% Similarity=-0.027 Sum_probs=100.8
Q ss_pred cChHHHHHHHHHHHH-HcCCCcEEEEEeCchHHHHHHHHHHCCC---ccceEEEEeCCCCCCchhhh-cchhhHHHhhhc
Q 019157 87 LGSDEVGRVLGQVID-TFNLAPVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTGIKPALPLFA-LNLPLIRDFVLG 161 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~-~l~~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~ 161 (345)
.+++++++.|..-+. -.--+|+.++||||||++|.++|.+... .+..+.+.++..+....... ...+
T Consensus 54 ~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~-------- 125 (244)
T COG3208 54 TDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLD-------- 125 (244)
T ss_pred ccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCC--------
Confidence 345778888887776 3333699999999999999999976532 36677777766542111000 0000
Q ss_pred chhHHHHHHHHhhhcC--CChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcch
Q 019157 162 SSFGYQWLIRFCCMKK--VGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWS 239 (345)
Q Consensus 162 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~ 239 (345)
...+.+.+......+. +.+.++....... .++-......+..... ..+ .||+.++.|++|.....
T Consensus 126 D~~~l~~l~~lgG~p~e~led~El~~l~LPi-----lRAD~~~~e~Y~~~~~-------~pl-~~pi~~~~G~~D~~vs~ 192 (244)
T COG3208 126 DADFLADLVDLGGTPPELLEDPELMALFLPI-----LRADFRALESYRYPPP-------APL-ACPIHAFGGEKDHEVSR 192 (244)
T ss_pred HHHHHHHHHHhCCCChHHhcCHHHHHHHHHH-----HHHHHHHhcccccCCC-------CCc-CcceEEeccCcchhccH
Confidence 0122233322222110 1111222211111 1222222222221111 233 69999999994443333
Q ss_pred HhHHHHHhhCC-CCeEEEEcCCccccccCHHHHHHHHHHHHHc
Q 019157 240 EEGSRVADALP-QAKFVGHSGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 240 ~~~~~~~~~~~-~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
+....+.+... ..++.++++|||...++.+++.+.|.+.+..
T Consensus 193 ~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 193 DELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhhh
Confidence 67777777776 5688888999999999999999999998864
No 69
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.27 E-value=5.8e-11 Score=95.99 Aligned_cols=36 Identities=28% Similarity=0.299 Sum_probs=33.2
Q ss_pred cCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 103 FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
.+.+++.|+|||+||.+++.++.+. .+|+++|++++
T Consensus 58 ~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 58 PDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp CTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred CCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 3678999999999999999999998 78999999987
No 70
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.24 E-value=8.2e-11 Score=101.40 Aligned_cols=126 Identities=11% Similarity=0.102 Sum_probs=81.4
Q ss_pred HHcC-CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHHHHHHHhhhcCCC
Q 019157 101 DTFN-LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVG 179 (345)
Q Consensus 101 ~~l~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (345)
+..| .++++|+|+|||...++.+|++.| ++++||.+|....... ..+. .. .
T Consensus 124 ~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv----~~~~----~~------------------~ 175 (258)
T KOG1552|consen 124 NRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRV----AFPD----TK------------------T 175 (258)
T ss_pred hhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhh----hccC----cc------------------e
Confidence 4443 579999999999999999999999 9999999986421100 0000 00 0
Q ss_pred hhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcch--HhHHHHHhhCCCC-eEEE
Q 019157 180 SFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWS--EEGSRVADALPQA-KFVG 256 (345)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~--~~~~~~~~~~~~~-~~~~ 256 (345)
..... .+..+ ..... .++|+|+++|+ .|.++ ..+..+-+..++. +-.+
T Consensus 176 ~~~~d-----------------~f~~i---------~kI~~-i~~PVLiiHgt--dDevv~~sHg~~Lye~~k~~~epl~ 226 (258)
T KOG1552|consen 176 TYCFD-----------------AFPNI---------EKISK-ITCPVLIIHGT--DDEVVDFSHGKALYERCKEKVEPLW 226 (258)
T ss_pred EEeec-----------------ccccc---------Cccee-ccCCEEEEecc--cCceecccccHHHHHhccccCCCcE
Confidence 00000 00000 11122 26899999999 55555 7788888888775 5556
Q ss_pred E-cCCccccccCHHHHHHHHHHHHHcCCc
Q 019157 257 H-SGGRWPQVDSADELAKHIADFVSSLPK 284 (345)
Q Consensus 257 i-~~GH~~~~e~pe~v~~~I~~fl~~~~~ 284 (345)
+ ++||.-..-. .++...+..|+....+
T Consensus 227 v~g~gH~~~~~~-~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 227 VKGAGHNDIELY-PEYIEHLRRFISSVLP 254 (258)
T ss_pred EecCCCcccccC-HHHHHHHHHHHHHhcc
Confidence 6 8899766544 4566888888887654
No 71
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.14 E-value=1.8e-09 Score=104.03 Aligned_cols=81 Identities=17% Similarity=0.084 Sum_probs=63.4
Q ss_pred CcchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhc
Q 019157 1 MINSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (345)
Q Consensus 1 ~i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 80 (345)
+++.|.++||+|+++|+++-+.+++
T Consensus 239 lVr~lv~qG~~VflIsW~nP~~~~r------------------------------------------------------- 263 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRNPDKAHR------------------------------------------------------- 263 (560)
T ss_pred HHHHHHHcCCeEEEEeCCCCChhhc-------------------------------------------------------
Confidence 4678899999999999999776554
Q ss_pred cccccccChHHHHHHHHH----HHHHcCCCcEEEEEeCchHHHHHH----HHHHCCC-ccceEEEEeCCC
Q 019157 81 SVKVIELGSDEVGRVLGQ----VIDTFNLAPVHLVLHDSALPMSAN----WVAENPG-SVKSLTLLDTGI 141 (345)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~----ll~~l~~~~~~lvGhS~Gg~ia~~----~A~~~p~-~v~~lvli~~~~ 141 (345)
.+++++|++.+.+ +.+..|.++++++|+||||.+++. +|+++++ +|++++++.++.
T Consensus 264 -----~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 264 -----EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 2344555544444 444557789999999999999997 8889986 899999998874
No 72
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.13 E-value=6.2e-10 Score=99.86 Aligned_cols=75 Identities=24% Similarity=0.295 Sum_probs=65.4
Q ss_pred ceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhccccccccCh
Q 019157 10 FNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVKVIELGS 89 (345)
Q Consensus 10 ~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (345)
|.||+|.+||+|.|+.+.. ..++.
T Consensus 189 FEVI~PSlPGygwSd~~sk--------------------------------------------------------~GFn~ 212 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSK--------------------------------------------------------TGFNA 212 (469)
T ss_pred EEEeccCCCCcccCcCCcc--------------------------------------------------------CCccH
Confidence 8999999999999998543 13444
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
-.++..+..++-+||.+++.|=|-.||+.|+..+|..+|++|.++-+-.+.
T Consensus 213 ~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 213 AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 779999999999999999999999999999999999999999887765544
No 73
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.11 E-value=3.1e-10 Score=107.25 Aligned_cols=53 Identities=17% Similarity=0.107 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHc------CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 90 DEVGRVLGQVIDTF------NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 90 ~~~~~~l~~ll~~l------~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
..+++++.++++.| ++++++||||||||.||..++.+.|++|.++|++||..+
T Consensus 97 ~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 97 KLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 34555555555533 468999999999999999999999999999999999853
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.09 E-value=1.2e-09 Score=91.17 Aligned_cols=196 Identities=13% Similarity=0.069 Sum_probs=111.7
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
+.+|++.|+.++.+|++|.|.|+.+.. |.
T Consensus 55 A~~~e~~gis~fRfDF~GnGeS~gsf~----------------~G----------------------------------- 83 (269)
T KOG4667|consen 55 AKALEKEGISAFRFDFSGNGESEGSFY----------------YG----------------------------------- 83 (269)
T ss_pred HHHHHhcCceEEEEEecCCCCcCCccc----------------cC-----------------------------------
Confidence 567888999999999999999987532 10
Q ss_pred ccccccChHHHHHHHHHHHHHcCC-Cc--EEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHh
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNL-AP--VHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDF 158 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~-~~--~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 158 (345)
.| ...++||..+++.+.- .+ .+++|||-||.+++.+|+++++ ++-+|.++.-.... ..+.+.
T Consensus 84 ----n~--~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~--------~~I~eR 148 (269)
T KOG4667|consen 84 ----NY--NTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLK--------NGINER 148 (269)
T ss_pred ----cc--cchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchh--------cchhhh
Confidence 01 1235888888887642 33 3499999999999999999998 66666665432110 111111
Q ss_pred hhcchhHHHHHHHHhhhcCCC-hhhHHHHHHHhccchhHHHHHHHHHhhccccchhhccccccc-CCCCEEEEEecCCCC
Q 019157 159 VLGSSFGYQWLIRFCCMKKVG-SFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGI-KGIPMQILWSSVWSK 236 (345)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~PvliI~G~~D~D 236 (345)
+. +-.+++.....+-...+ ....... ......+.. ++.... .....+ ..||||-++|..|.-
T Consensus 149 lg--~~~l~~ike~Gfid~~~rkG~y~~r-------vt~eSlmdr---Lntd~h----~aclkId~~C~VLTvhGs~D~I 212 (269)
T KOG4667|consen 149 LG--EDYLERIKEQGFIDVGPRKGKYGYR-------VTEESLMDR---LNTDIH----EACLKIDKQCRVLTVHGSEDEI 212 (269)
T ss_pred hc--ccHHHHHHhCCceecCcccCCcCce-------ecHHHHHHH---Hhchhh----hhhcCcCccCceEEEeccCCce
Confidence 10 01112222111100000 0000000 000000000 110000 001122 269999999996555
Q ss_pred cchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHH
Q 019157 237 EWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
.+++.+.++++.+|+-++.++ ++.|..-.. .++.+.....|..
T Consensus 213 VPve~AkefAk~i~nH~L~iIEgADHnyt~~-q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 213 VPVEDAKEFAKIIPNHKLEIIEGADHNYTGH-QSQLVSLGLEFIK 256 (269)
T ss_pred eechhHHHHHHhccCCceEEecCCCcCccch-hhhHhhhcceeEE
Confidence 666999999999999999999 889976543 2445555555544
No 75
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.02 E-value=2.2e-08 Score=87.54 Aligned_cols=55 Identities=15% Similarity=0.086 Sum_probs=44.0
Q ss_pred ChHHHHHHHHHHHHHcCCC-cEEEEEeCchHHHHHHHHHHC---CCccceEEEEeCCCC
Q 019157 88 GSDEVGRVLGQVIDTFNLA-PVHLVLHDSALPMSANWVAEN---PGSVKSLTLLDTGIK 142 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~~~-~~~lvGhS~Gg~ia~~~A~~~---p~~v~~lvli~~~~~ 142 (345)
+++++++...+.|.....+ |+.|+|||+||.+|..+|.+- ...|..|+++|+..+
T Consensus 47 si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 47 SIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp SHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred CHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 5577888887777765555 999999999999999999753 345999999997654
No 76
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.98 E-value=4e-08 Score=92.05 Aligned_cols=55 Identities=18% Similarity=0.150 Sum_probs=47.7
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHC-----CCccceEEEEeCCC
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAEN-----PGSVKSLTLLDTGI 141 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~-----p~~v~~lvli~~~~ 141 (345)
.+++++|++-|.++++.+|.+ ++|+|+|+||..++.+++.. |++++++|+++++.
T Consensus 149 ~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PI 208 (406)
T TIGR01849 149 KFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPI 208 (406)
T ss_pred CCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCc
Confidence 467789999999999999866 99999999999988777665 66799999999885
No 77
>PLN02442 S-formylglutathione hydrolase
Probab=98.96 E-value=2.6e-08 Score=90.29 Aligned_cols=53 Identities=15% Similarity=0.170 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 89 ~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
.+++...+...++.++.++++|+||||||..++.++.++|+++++++.+++..
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 36677777777777788899999999999999999999999999999998864
No 78
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.96 E-value=1.8e-09 Score=97.24 Aligned_cols=52 Identities=23% Similarity=0.275 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHH--cCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 91 EVGRVLGQVIDT--FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 91 ~~~~~l~~ll~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
++++.+..+.+. ++.++++||||||||.++..++.++|++|.++|+++|..+
T Consensus 95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 344444444444 3457899999999999999999999999999999999854
No 79
>PLN00021 chlorophyllase
Probab=98.91 E-value=3.2e-08 Score=90.58 Aligned_cols=39 Identities=15% Similarity=0.040 Sum_probs=33.2
Q ss_pred cCCCcEEEEEeCchHHHHHHHHHHCCC-----ccceEEEEeCCC
Q 019157 103 FNLAPVHLVLHDSALPMSANWVAENPG-----SVKSLTLLDTGI 141 (345)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~A~~~p~-----~v~~lvli~~~~ 141 (345)
.+.++++|+||||||.+++.+|.++++ +++++|+++|..
T Consensus 123 ~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 123 PDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred cChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 345789999999999999999999885 578999888763
No 80
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.88 E-value=9.5e-08 Score=88.94 Aligned_cols=191 Identities=13% Similarity=0.055 Sum_probs=98.8
Q ss_pred chhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhccc
Q 019157 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (345)
Q Consensus 3 ~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 82 (345)
+.|.++|+.++++|.||.|.|.+-..
T Consensus 212 ~~l~~rGiA~LtvDmPG~G~s~~~~l------------------------------------------------------ 237 (411)
T PF06500_consen 212 DYLAPRGIAMLTVDMPGQGESPKWPL------------------------------------------------------ 237 (411)
T ss_dssp CCCHHCT-EEEEE--TTSGGGTTT-S------------------------------------------------------
T ss_pred HHHHhCCCEEEEEccCCCcccccCCC------------------------------------------------------
Confidence 45788999999999999999864111
Q ss_pred cccccChHHHHHHHHHHHHHcC---CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhh
Q 019157 83 KVIELGSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFV 159 (345)
Q Consensus 83 ~~~~~~~~~~~~~l~~ll~~l~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 159 (345)
.-+.+.+...+.+.+.... -.+|.++|-|+||.+|.++|..++.|++++|.++++.-..+... ...
T Consensus 238 ---~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~--------~~~ 306 (411)
T PF06500_consen 238 ---TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP--------EWQ 306 (411)
T ss_dssp ----S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H--------HHH
T ss_pred ---CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccH--------HHH
Confidence 0011234455555555543 25899999999999999999999999999999998864333210 001
Q ss_pred hcchhHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccc-cccCCCCEEEEEecCCCCcc
Q 019157 160 LGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSS-EGIKGIPMQILWSSVWSKEW 238 (345)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~PvliI~G~~D~D~~ 238 (345)
.+.+..+...+....... ..+.+..... + ..+.......+ .+-..+|+|.|.+++|.-.+
T Consensus 307 ~~~P~my~d~LA~rlG~~--~~~~~~l~~e----------------l-~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P 367 (411)
T PF06500_consen 307 QRVPDMYLDVLASRLGMA--AVSDESLRGE----------------L-NKFSLKTQGLLSGRRCPTPLLAINGEDDPVSP 367 (411)
T ss_dssp TTS-HHHHHHHHHHCT-S--CE-HHHHHHH----------------G-GGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-
T ss_pred hcCCHHHHHHHHHHhCCc--cCCHHHHHHH----------------H-HhcCcchhccccCCCCCcceEEeecCCCCCCC
Confidence 111122222222111111 0011111111 1 11111111122 12236899999999444344
Q ss_pred hHhHHHHHhhCCCCeEEEE-cCC-ccccccCHHHHHHHHHHHHHc
Q 019157 239 SEEGSRVADALPQAKFVGH-SGG-RWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~i-~~G-H~~~~e~pe~v~~~I~~fl~~ 281 (345)
.+..+-++..-.+.+...+ ... |.-+ +.-...+.+||+.
T Consensus 368 ~eD~~lia~~s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 368 IEDSRLIAESSTDGKALRIPSKPLHMGY----PQALDEIYKWLED 408 (411)
T ss_dssp HHHHHHHHHTBTT-EEEEE-SSSHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceeecCCCccccch----HHHHHHHHHHHHH
Confidence 4777777777777888888 333 3222 3455667777764
No 81
>PRK11460 putative hydrolase; Provisional
Probab=98.88 E-value=1e-07 Score=83.82 Aligned_cols=49 Identities=10% Similarity=0.064 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 91 EVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 91 ~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
.+.+.+..+.+.+++ ++++|+|+|+||.+++.++.++|+.+.+++.+++
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg 136 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG 136 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc
Confidence 344455555555555 5799999999999999999999988787776643
No 82
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.88 E-value=1.7e-07 Score=84.57 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHH---cCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 91 EVGRVLGQVIDT---FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 91 ~~~~~l~~ll~~---l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
.+++++..+++. ++.+++.++||||||.+++.++.++|+.+++++++++..
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 346777777776 355689999999999999999999999999999988764
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.83 E-value=1.2e-07 Score=84.78 Aligned_cols=62 Identities=16% Similarity=0.234 Sum_probs=41.2
Q ss_pred ccccCCCCEEEEEecCCCCcch--HhHHHHHh-hCCCCeEEEE-cCCcccccc----CHH-HHHHHHHHHHHcC
Q 019157 218 SEGIKGIPMQILWSSVWSKEWS--EEGSRVAD-ALPQAKFVGH-SGGRWPQVD----SAD-ELAKHIADFVSSL 282 (345)
Q Consensus 218 ~~~~~~~PvliI~G~~D~D~~~--~~~~~~~~-~~~~~~~~~i-~~GH~~~~e----~pe-~v~~~I~~fl~~~ 282 (345)
+.++. +|+|||++. .|+++ +....... ..|+..+..- -+||.-++. +|. -.-+.|.+|++..
T Consensus 270 L~~Ir-~PtLii~A~--DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 270 LPKIR-KPTLIINAK--DDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ccccc-cceEEEecC--CCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 35554 799999999 67666 23333333 6677777776 799987776 443 4457777777654
No 84
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.83 E-value=2.3e-08 Score=84.62 Aligned_cols=213 Identities=12% Similarity=0.062 Sum_probs=117.0
Q ss_pred chhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhccc
Q 019157 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (345)
Q Consensus 3 ~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 82 (345)
..+.+.||.|.++|+||.|.|+.... +++=|.|
T Consensus 51 ~~a~~~Gf~Vlt~dyRG~g~S~p~~~----------------------~~~~~~~------------------------- 83 (281)
T COG4757 51 AAAAKAGFEVLTFDYRGIGQSRPASL----------------------SGSQWRY------------------------- 83 (281)
T ss_pred HHhhccCceEEEEecccccCCCcccc----------------------ccCccch-------------------------
Confidence 45678899999999999999976321 1111111
Q ss_pred cccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcc---hh--hHHH
Q 019157 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALN---LP--LIRD 157 (345)
Q Consensus 83 ~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~---~~--~~~~ 157 (345)
.++...|+...|..+-+.+...|...|||||||.+.-.+.. +| +.......++..- +..|.-. .. .+..
T Consensus 84 --~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gag--wsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 84 --LDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAG--WSGWMGLRERLGAVLLWN 157 (281)
T ss_pred --hhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEeccccc--cccchhhhhcccceeecc
Confidence 24555788888888888888789999999999987665553 44 4544444443321 1111000 00 0000
Q ss_pred hhhcchhHHHHHHHHh-h--hcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchh-hcccccccCCCCEEEEEecC
Q 019157 158 FVLGSSFGYQWLIRFC-C--MKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMA-EWGSSEGIKGIPMQILWSSV 233 (345)
Q Consensus 158 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~PvliI~G~~ 233 (345)
+....-.++...+... . ...++.....+++..-+.+... .....+. ..+....+ .+|+..+...+
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~----------fddp~~~~~~q~yaaV-rtPi~~~~~~D 226 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYY----------FDDPAMRNYRQVYAAV-RTPITFSRALD 226 (281)
T ss_pred ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcccc----------ccChhHhHHHHHHHHh-cCceeeeccCC
Confidence 0000001111111111 1 1234444444444433322110 0000000 01112333 48999999995
Q ss_pred CCCcchHhHHHHHhhCCCCeEEEE---c----CCccccccCH-HHHHHHHHHHH
Q 019157 234 WSKEWSEEGSRVADALPQAKFVGH---S----GGRWPQVDSA-DELAKHIADFV 279 (345)
Q Consensus 234 D~D~~~~~~~~~~~~~~~~~~~~i---~----~GH~~~~e~p-e~v~~~I~~fl 279 (345)
|.+.+....+.+++..+|+.+... . -||+-..-+| |.+-+.+.+|+
T Consensus 227 D~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 227 DPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred CCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 555555788899999988866543 2 3999888877 77878777765
No 85
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.79 E-value=8.1e-08 Score=96.26 Aligned_cols=156 Identities=13% Similarity=0.054 Sum_probs=87.5
Q ss_pred ChHHHHHHHHHHHHHcCC---CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchh
Q 019157 88 GSDEVGRVLGQVIDTFNL---APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSF 164 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~~---~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (345)
..+++.+.+. +++..+. +++.+.|+|+||.+++..+...| ++++.+.+.+................ .
T Consensus 453 ~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~--------~ 522 (620)
T COG1506 453 DLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLR--------F 522 (620)
T ss_pred cHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhc--------C
Confidence 3456666776 5555553 48999999999999999999988 66666666554311000000000000 0
Q ss_pred HHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHHH
Q 019157 165 GYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSR 244 (345)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~ 244 (345)
.... .... +....+ .+.... ......++ ++|+|+|+|+.|..++++.+.+
T Consensus 523 ~~~~----~~~~--~~~~~~-----------------~~~~~s------p~~~~~~i-~~P~LliHG~~D~~v~~~q~~~ 572 (620)
T COG1506 523 DPEE----NGGG--PPEDRE-----------------KYEDRS------PIFYADNI-KTPLLLIHGEEDDRVPIEQAEQ 572 (620)
T ss_pred CHHH----hCCC--cccChH-----------------HHHhcC------hhhhhccc-CCCEEEEeecCCccCChHHHHH
Confidence 0000 0000 000000 000000 00111344 4899999999666666666666
Q ss_pred HHhhC----CCCeEEEE-cCCccccc-cCHHHHHHHHHHHHHcCC
Q 019157 245 VADAL----PQAKFVGH-SGGRWPQV-DSADELAKHIADFVSSLP 283 (345)
Q Consensus 245 ~~~~~----~~~~~~~i-~~GH~~~~-e~pe~v~~~I~~fl~~~~ 283 (345)
+.+.+ ...+++++ +.||.+.- ++-..+.+.+.+|+++..
T Consensus 573 ~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 573 LVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred HHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 66655 34688888 88998765 556677888888887643
No 86
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.77 E-value=1.1e-08 Score=85.51 Aligned_cols=135 Identities=14% Similarity=0.111 Sum_probs=83.2
Q ss_pred CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHHHHHHHhhhcCCChhhHH
Q 019157 105 LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVGSFDVE 184 (345)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (345)
-.+++|.|-|+||.+|..+|+++.+++.++|+-++...- | ....+.+. .+.-+.+...+
T Consensus 148 ktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI--p--~~~i~~v~-------p~~~k~i~~lc---------- 206 (300)
T KOG4391|consen 148 KTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI--P--HMAIPLVF-------PFPMKYIPLLC---------- 206 (300)
T ss_pred cceEEEEecccCCeeEEEeeccchhheeeeeeechhccc--h--hhhhheec-------cchhhHHHHHH----------
Confidence 368999999999999999999999999999998875321 0 00111100 00000111001
Q ss_pred HHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCC--eEEEE-cCCc
Q 019157 185 DNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA--KFVGH-SGGR 261 (345)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~--~~~~i-~~GH 261 (345)
... .+..++. -+.+++|.|+|.|..|+-.+....+.+....|.. ++..+ +|.|
T Consensus 207 -------~kn----~~~S~~k-------------i~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtH 262 (300)
T KOG4391|consen 207 -------YKN----KWLSYRK-------------IGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTH 262 (300)
T ss_pred -------HHh----hhcchhh-------------hccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCcc
Confidence 000 0000000 1234689999999944444447888888887654 67788 7888
Q ss_pred cccccCHHHHHHHHHHHHHcCCcc
Q 019157 262 WPQVDSADELAKHIADFVSSLPKT 285 (345)
Q Consensus 262 ~~~~e~pe~v~~~I~~fl~~~~~~ 285 (345)
.--.-. +...++|.+||.++..+
T Consensus 263 NDT~i~-dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 263 NDTWIC-DGYFQAIEDFLAEVVKS 285 (300)
T ss_pred CceEEe-ccHHHHHHHHHHHhccC
Confidence 543322 56779999999987654
No 87
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.73 E-value=1.7e-07 Score=86.67 Aligned_cols=86 Identities=13% Similarity=0.234 Sum_probs=61.9
Q ss_pred cchhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcc
Q 019157 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 81 (345)
+..+.++||+|++++.||+|.|.-... .- |+
T Consensus 147 v~~a~~~G~r~VVfN~RG~~g~~LtTp----------r~----f~----------------------------------- 177 (409)
T KOG1838|consen 147 VHEAQRKGYRVVVFNHRGLGGSKLTTP----------RL----FT----------------------------------- 177 (409)
T ss_pred HHHHHhCCcEEEEECCCCCCCCccCCC----------ce----ee-----------------------------------
Confidence 345678899999999999998864211 00 10
Q ss_pred ccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCc---cceEEEEeCC
Q 019157 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS---VKSLTLLDTG 140 (345)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~---v~~lvli~~~ 140 (345)
....+|+...+..+.+.....|...||.||||++.+.|..+-.++ +.++++.+|.
T Consensus 178 ----ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 178 ----AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred ----cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 223467777777777788888999999999999999999876553 4455555443
No 88
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.72 E-value=4.9e-07 Score=83.29 Aligned_cols=52 Identities=21% Similarity=0.197 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCc-cceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS-VKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~-v~~lvli~~~~ 141 (345)
+.+.+.+..+++..+.+++.++|+|.||.++..+++.++.+ |++++++.++.
T Consensus 165 e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~ 217 (445)
T COG3243 165 EGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPV 217 (445)
T ss_pred HHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecch
Confidence 77788888888889999999999999999999999999988 99999988773
No 89
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.71 E-value=2.1e-07 Score=76.80 Aligned_cols=54 Identities=13% Similarity=0.159 Sum_probs=38.0
Q ss_pred CCCEEEEEecCCCCcch--HhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHH
Q 019157 223 GIPMQILWSSVWSKEWS--EEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVS 280 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~--~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~ 280 (345)
.+|.++|+|+ .|.+. ...-++.+.. ..+++++ +++||++- +-+.+.+.|.+||.
T Consensus 149 P~~~lvi~g~--~Ddvv~l~~~l~~~~~~-~~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 149 PSPGLVIQGD--ADDVVDLVAVLKWQESI-KITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred CCCceeEecC--hhhhhcHHHHHHhhcCC-CCceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 4799999999 55555 3333444442 3467777 89998775 55788999999986
No 90
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.71 E-value=4e-07 Score=99.15 Aligned_cols=56 Identities=23% Similarity=0.103 Sum_probs=47.6
Q ss_pred ccChHHHHHHHHHHHHHcCC-CcEEEEEeCchHHHHHHHHHH---CCCccceEEEEeCCC
Q 019157 86 ELGSDEVGRVLGQVIDTFNL-APVHLVLHDSALPMSANWVAE---NPGSVKSLTLLDTGI 141 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~-~~~~lvGhS~Gg~ia~~~A~~---~p~~v~~lvli~~~~ 141 (345)
.++++++++++.+.++.+.. .+++++||||||.++..+|.+ .+++|..++++++..
T Consensus 1112 ~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1112 ATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred CCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 35668899999999987654 489999999999999999985 578899999998754
No 91
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.69 E-value=2.6e-08 Score=94.79 Aligned_cols=52 Identities=13% Similarity=0.145 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCc----cceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS----VKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~----v~~lvli~~~~ 141 (345)
+.+.+.+.++.+..+..+++||||||||.++..++..+|+. |+++|.++++.
T Consensus 146 ~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 146 DGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCC
Confidence 56777777888888889999999999999999999998874 78999998874
No 92
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.68 E-value=6.7e-07 Score=91.23 Aligned_cols=35 Identities=3% Similarity=-0.085 Sum_probs=32.0
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
.+|.++|.|+||.+++.+|...|..++++|.+++.
T Consensus 338 GkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 338 GKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred CeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 58999999999999999999999999999987765
No 93
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.67 E-value=1.5e-07 Score=78.29 Aligned_cols=136 Identities=15% Similarity=0.141 Sum_probs=83.2
Q ss_pred HHHHHHHHHHH----HHcCCCcEEEEEeCchHHHHHHHHHHCCC----ccceEEEEeCCCCCCchhhhcchhhHHHhhhc
Q 019157 90 DEVGRVLGQVI----DTFNLAPVHLVLHDSALPMSANWVAENPG----SVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (345)
Q Consensus 90 ~~~~~~l~~ll----~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~----~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 161 (345)
++.+.++..++ ++-+.++++|||+|+|+-+......+-|. +|..++|+++.....+...
T Consensus 48 ~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeih------------- 114 (192)
T PF06057_consen 48 EQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIH------------- 114 (192)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEE-------------
Confidence 44555555555 45577899999999999888888877774 7899999998754433210
Q ss_pred chhHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHh
Q 019157 162 SSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEE 241 (345)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~ 241 (345)
...++. ..-+.. .........++...|++.|.|+.+.|..+..
T Consensus 115 ----v~~wlg----~~~~~~-----------------------------~~~~~pei~~l~~~~v~CiyG~~E~d~~cp~ 157 (192)
T PF06057_consen 115 ----VSGWLG----MGGDDA-----------------------------AYPVIPEIAKLPPAPVQCIYGEDEDDSLCPS 157 (192)
T ss_pred ----hhhhcC----CCCCcc-----------------------------cCCchHHHHhCCCCeEEEEEcCCCCCCcCcc
Confidence 000000 000000 0000011133334699999999766655532
Q ss_pred HHHHHhhCCCCeEEEEcCCccccccCHHHHHHHHHHHHHc
Q 019157 242 GSRVADALPQAKFVGHSGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
. ..++.+.+.+++||.+-.+ .+++++.|.+-+++
T Consensus 158 l-----~~~~~~~i~lpGgHHfd~d-y~~La~~Il~~l~~ 191 (192)
T PF06057_consen 158 L-----RQPGVEVIALPGGHHFDGD-YDALAKRILDALKA 191 (192)
T ss_pred c-----cCCCcEEEEcCCCcCCCCC-HHHHHHHHHHHHhc
Confidence 1 1256788888999976554 67788877776653
No 94
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.65 E-value=5.5e-07 Score=77.99 Aligned_cols=51 Identities=10% Similarity=-0.004 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 91 EVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 91 ~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
++.+.+..+.+..++ ++++|+||||||.+++.++.++|+++.+++.+++..
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 344444455555544 589999999999999999999999999999888764
No 95
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.65 E-value=3.7e-08 Score=97.50 Aligned_cols=81 Identities=12% Similarity=0.055 Sum_probs=61.1
Q ss_pred chhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhccc
Q 019157 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (345)
Q Consensus 3 ~~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 82 (345)
..|.++||.|+++|+||+|.|+....
T Consensus 47 ~~l~~~Gy~vv~~D~RG~g~S~g~~~------------------------------------------------------ 72 (550)
T TIGR00976 47 AWFVAQGYAVVIQDTRGRGASEGEFD------------------------------------------------------ 72 (550)
T ss_pred HHHHhCCcEEEEEeccccccCCCceE------------------------------------------------------
Confidence 45778999999999999999986321
Q ss_pred cccccChHHHHHHHHHHHHHcC-----CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 83 KVIELGSDEVGRVLGQVIDTFN-----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 83 ~~~~~~~~~~~~~l~~ll~~l~-----~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
.++ ...++|+.++++.+. -.++.++|+||||.+++.+|..+|.+++++|..++..
T Consensus 73 ---~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 73 ---LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred ---ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 011 123444445544331 2589999999999999999999999999999887763
No 96
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.64 E-value=3e-06 Score=75.98 Aligned_cols=167 Identities=16% Similarity=0.162 Sum_probs=89.7
Q ss_pred ccChHHHHHHHHHHHHHc------CCCcEEEEEeCchHHHHHHHHHHCC---CccceEEEEeCCCCCCc--h----hhh-
Q 019157 86 ELGSDEVGRVLGQVIDTF------NLAPVHLVLHDSALPMSANWVAENP---GSVKSLTLLDTGIKPAL--P----LFA- 149 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l------~~~~~~lvGhS~Gg~ia~~~A~~~p---~~v~~lvli~~~~~~~~--~----~~~- 149 (345)
.|++++.++.-.++++.+ .-.+++|+|||+|+.+++++..+.+ .+|.+++++-|...... + ...
T Consensus 58 ~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~ 137 (266)
T PF10230_consen 58 LFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPL 137 (266)
T ss_pred ccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHH
Confidence 456677777766666543 2357999999999999999999999 78999999998843211 1 000
Q ss_pred -cchhh---HHH----hhhcchhH-HHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHH-hhccccc---hhhcc
Q 019157 150 -LNLPL---IRD----FVLGSSFG-YQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGR-KLNNSFD---MAEWG 216 (345)
Q Consensus 150 -~~~~~---~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~ 216 (345)
...+. +.. .+.-.+.. ...+++..... ++.........+..+...+..+...+ ++..-.. ...+.
T Consensus 138 ~~~~~~~~~~~~~~~~l~~~lP~~~~~~lv~~~~~~--~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~ 215 (266)
T PF10230_consen 138 LFSPPPLVWLASFLSFLLSLLPESVLRWLVRWVMGF--PPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIK 215 (266)
T ss_pred HhhccHHHHHHHHHHHHHHHCCHHHHHHHHHHHcCC--ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHH
Confidence 00011 000 01112222 22223222222 22244444444555444443332222 1211111 11122
Q ss_pred cccccCCCCEEEEEecCCCCcch--HhHHHHHhhCCC--CeEEEE
Q 019157 217 SSEGIKGIPMQILWSSVWSKEWS--EEGSRVADALPQ--AKFVGH 257 (345)
Q Consensus 217 ~~~~~~~~PvliI~G~~D~D~~~--~~~~~~~~~~~~--~~~~~i 257 (345)
....- ..++.+.+|. .|.|+ +..+.+.+..|+ .++.+-
T Consensus 216 ~~~~~-~~kl~f~fg~--~D~Wvp~~~~~~l~~~~~~~~~~~~v~ 257 (266)
T PF10230_consen 216 HHNEN-GDKLWFYFGQ--NDHWVPNETRDELIERYPGHEPDVVVD 257 (266)
T ss_pred HhccC-CCEEEEEEeC--CCCCCCHHHHHHHHHHcCCCCCeEEEe
Confidence 11111 3588999999 89998 667888888884 344443
No 97
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.61 E-value=1.9e-06 Score=78.29 Aligned_cols=175 Identities=12% Similarity=0.071 Sum_probs=90.8
Q ss_pred HHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC-Cchhhhc--ch--hhHHHhhhcchhHHHHH
Q 019157 95 VLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP-ALPLFAL--NL--PLIRDFVLGSSFGYQWL 169 (345)
Q Consensus 95 ~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~-~~~~~~~--~~--~~~~~~~~~~~~~~~~~ 169 (345)
.|...++..|..++.|.|.||||.+|...|+..|..|..+-.+++.... .+..-.. .. ..+..-+. ...+...
T Consensus 164 ~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~--~~~~~~~ 241 (348)
T PF09752_consen 164 ALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFE--DTVYEEE 241 (348)
T ss_pred HHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhc--ccchhhh
Confidence 3445556668899999999999999999999999987777677665321 1110000 00 00000000 0000000
Q ss_pred HHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccc-cchhhcccccccCCCCEEEEEecCCCCcch--HhHHHHH
Q 019157 170 IRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNS-FDMAEWGSSEGIKGIPMQILWSSVWSKEWS--EEGSRVA 246 (345)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~PvliI~G~~D~D~~~--~~~~~~~ 246 (345)
.. .++.......................++.+... .....+. .....-.+.+|.++ +|..+ .....+.
T Consensus 242 ~~-----~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~--~P~dp~~ii~V~A~--~DaYVPr~~v~~Lq 312 (348)
T PF09752_consen 242 IS-----DIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFP--VPVDPSAIIFVAAK--NDAYVPRHGVLSLQ 312 (348)
T ss_pred hc-----ccccCcccccchhhccccchHHHHHHHHHHHHhhccccccC--CCCCCCcEEEEEec--CceEechhhcchHH
Confidence 00 000000000000000111111122222221111 1111111 11112256777777 66555 6777999
Q ss_pred hhCCCCeEEEEcCCcc-ccccCHHHHHHHHHHHHH
Q 019157 247 DALPQAKFVGHSGGRW-PQVDSADELAKHIADFVS 280 (345)
Q Consensus 247 ~~~~~~~~~~i~~GH~-~~~e~pe~v~~~I~~fl~ 280 (345)
+..|++++.++++||. .++-+.+.+.++|.+-++
T Consensus 313 ~~WPGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 313 EIWPGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred HhCCCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 9999999999988996 466778999999988664
No 98
>PRK10162 acetyl esterase; Provisional
Probab=98.50 E-value=4.2e-06 Score=77.11 Aligned_cols=50 Identities=10% Similarity=0.006 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHHC------CCccceEEEEeCCC
Q 019157 92 VGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAEN------PGSVKSLTLLDTGI 141 (345)
Q Consensus 92 ~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~------p~~v~~lvli~~~~ 141 (345)
..+.+.+..+.+++ ++++|+|+|+||.+++.++... +.++.++|++.|..
T Consensus 138 a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 138 VCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 34444444556665 5899999999999999998753 35788999988754
No 99
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.46 E-value=8.4e-06 Score=72.00 Aligned_cols=55 Identities=18% Similarity=0.084 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHHHcC-CCcEEEEEeCchHHHHHHHHHHC---CCccceEEEEeCCCC
Q 019157 88 GSDEVGRVLGQVIDTFN-LAPVHLVLHDSALPMSANWVAEN---PGSVKSLTLLDTGIK 142 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~-~~~~~lvGhS~Gg~ia~~~A~~~---p~~v~~lvli~~~~~ 142 (345)
+++++++...+.|.... -.|++|+|||+||.+|..+|.+- .+.|..|+++|+...
T Consensus 46 ~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 46 SLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 34677777776666554 36999999999999999999753 347999999999876
No 100
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.46 E-value=1.5e-06 Score=75.55 Aligned_cols=49 Identities=12% Similarity=0.042 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHc---C---CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 90 DEVGRVLGQVIDTF---N---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 90 ~~~~~~l~~ll~~l---~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
+.+.+++.+.++.+ . .+++.++|+|+||.+++.+|.+. ..+++.|..-+
T Consensus 76 ~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 76 EQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 44555554444433 2 35899999999999999999877 57888876544
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.43 E-value=6.6e-06 Score=69.45 Aligned_cols=54 Identities=13% Similarity=0.058 Sum_probs=45.3
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
...++...+.+.++++....+.+.|||.||||..|..+|.+++- ++ |+++|...
T Consensus 39 ~~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~--~a-vLiNPav~ 92 (187)
T PF05728_consen 39 PPFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGL--PA-VLINPAVR 92 (187)
T ss_pred CcCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCC--CE-EEEcCCCC
Confidence 45567788889999998887779999999999999999999863 33 89998864
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.42 E-value=7.3e-07 Score=89.79 Aligned_cols=39 Identities=13% Similarity=-0.024 Sum_probs=32.4
Q ss_pred ChHHHHHHHHHHHHHcC----------------CCcEEEEEeCchHHHHHHHHHH
Q 019157 88 GSDEVGRVLGQVIDTFN----------------LAPVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~----------------~~~~~lvGhS~Gg~ia~~~A~~ 126 (345)
.++.++.|+..+...+. ..+++++||||||.++..++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 55778888887777665 3589999999999999999975
No 103
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.35 E-value=2.2e-06 Score=71.42 Aligned_cols=115 Identities=21% Similarity=0.306 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHH-HHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHHH
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWV-AENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQW 168 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A-~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (345)
++....+.+.+..+. ++++|||||+|+..++.++ ...+.+|.+++|++|.......
T Consensus 40 ~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~---------------------- 96 (171)
T PF06821_consen 40 DEWVQALDQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPE---------------------- 96 (171)
T ss_dssp HHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHH----------------------
T ss_pred HHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCccccc----------------------
Confidence 344444444444333 5799999999999999999 7778899999999987431000
Q ss_pred HHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcch--HhHHHHH
Q 019157 169 LIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWS--EEGSRVA 246 (345)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~--~~~~~~~ 246 (345)
...+. +.. +.. ... ..+ .+|.++|.++ +|.++ +.+++++
T Consensus 97 -------~~~~~---------~~~-------------f~~-~p~------~~l-~~~~~viaS~--nDp~vp~~~a~~~A 137 (171)
T PF06821_consen 97 -------PFPPE---------LDG-------------FTP-LPR------DPL-PFPSIVIASD--NDPYVPFERAQRLA 137 (171)
T ss_dssp -------CCTCG---------GCC-------------CTT-SHC------CHH-HCCEEEEEET--TBSSS-HHHHHHHH
T ss_pred -------chhhh---------ccc-------------ccc-Ccc------ccc-CCCeEEEEcC--CCCccCHHHHHHHH
Confidence 00000 000 000 000 111 3677999999 56555 8889999
Q ss_pred hhCCCCeEEEE-cCCccccccC
Q 019157 247 DALPQAKFVGH-SGGRWPQVDS 267 (345)
Q Consensus 247 ~~~~~~~~~~i-~~GH~~~~e~ 267 (345)
+.+ +++++.+ ++||+.-.+-
T Consensus 138 ~~l-~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 138 QRL-GAELIILGGGGHFNAASG 158 (171)
T ss_dssp HHH-T-EEEEETS-TTSSGGGT
T ss_pred HHc-CCCeEECCCCCCcccccC
Confidence 988 6899999 8999876653
No 104
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.35 E-value=8.5e-06 Score=69.49 Aligned_cols=53 Identities=21% Similarity=0.118 Sum_probs=38.5
Q ss_pred HHHHHHHHHHH-HHcCCCcEEEEEeCchHHHHHHHHHH---CCCccceEEEEeCCCC
Q 019157 90 DEVGRVLGQVI-DTFNLAPVHLVLHDSALPMSANWVAE---NPGSVKSLTLLDTGIK 142 (345)
Q Consensus 90 ~~~~~~l~~ll-~~l~~~~~~lvGhS~Gg~ia~~~A~~---~p~~v~~lvli~~~~~ 142 (345)
+.+++.+...+ +.....+++++|||+||.++..++.+ .++.+.+++++++..+
T Consensus 47 ~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 47 DALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCCC
Confidence 34444443333 34445789999999999999998886 4567999999987653
No 105
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.30 E-value=5e-06 Score=74.47 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHc----CCCcEEEEEeCchHHHHHHHHHHCC-----CccceEEEEeCCCC
Q 019157 90 DEVGRVLGQVIDTF----NLAPVHLVLHDSALPMSANWVAENP-----GSVKSLTLLDTGIK 142 (345)
Q Consensus 90 ~~~~~~l~~ll~~l----~~~~~~lvGhS~Gg~ia~~~A~~~p-----~~v~~lvli~~~~~ 142 (345)
+++.+.|.-+...- +.++|+|+|||.|+.-++.|..... ..|.++||-+|..-
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 45555555444442 4579999999999999999998653 57999999999753
No 106
>COG0400 Predicted esterase [General function prediction only]
Probab=98.28 E-value=7.7e-06 Score=70.03 Aligned_cols=55 Identities=11% Similarity=0.251 Sum_probs=49.1
Q ss_pred cChHHHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 87 LGSDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
...+.+++.+..+.++.++ ++++++|+|-|+++++.+..++|+.++++|++.+..
T Consensus 78 ~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 78 LETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 4457788888888888888 799999999999999999999999999999998765
No 107
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.27 E-value=2.1e-05 Score=70.87 Aligned_cols=82 Identities=12% Similarity=0.043 Sum_probs=53.6
Q ss_pred hhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhccccc
Q 019157 5 LRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVKV 84 (345)
Q Consensus 5 L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (345)
|.++||.||..|.||.|.|+....+.. -.
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~~------------------------------------~~--------------- 81 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPMS------------------------------------PN--------------- 81 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TTS------------------------------------HH---------------
T ss_pred HHhCCCEEEEECCcccccCCCccccCC------------------------------------hh---------------
Confidence 889999999999999999987432100 00
Q ss_pred cccChHHHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 85 IELGSDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 85 ~~~~~~~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
..+|..+.| +.+..... .+|-++|.|++|..++.+|...|..+++++...+..
T Consensus 82 ---e~~D~~d~I-~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 82 ---EAQDGYDTI-EWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp ---HHHHHHHHH-HHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred ---HHHHHHHHH-HHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 002233333 33333344 489999999999999999998888999999887653
No 108
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.26 E-value=1.5e-05 Score=69.18 Aligned_cols=37 Identities=11% Similarity=0.085 Sum_probs=32.3
Q ss_pred CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 105 LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
.++++|+|.|.||++++.++.++|+.+.++|.+++..
T Consensus 104 ~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 104 PSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL 140 (216)
T ss_dssp GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---
T ss_pred hhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc
Confidence 3689999999999999999999999999999998754
No 109
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.24 E-value=6.6e-05 Score=69.02 Aligned_cols=142 Identities=10% Similarity=-0.028 Sum_probs=70.7
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHHHHHHHhhhcCCChhhHHH
Q 019157 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVGSFDVED 185 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (345)
+++.+.|.|.||.+++.+|+..| +|++++..-|.... +. . .+.... ...+-.++..
T Consensus 175 ~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-~~-------~--------------~~~~~~-~~~~y~~~~~ 230 (320)
T PF05448_consen 175 KRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-FR-------R--------------ALELRA-DEGPYPEIRR 230 (320)
T ss_dssp EEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS-HH-------H--------------HHHHT---STTTHHHHH
T ss_pred ceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc-hh-------h--------------hhhcCC-ccccHHHHHH
Confidence 68999999999999999999986 59998888765432 11 0 000000 0011223333
Q ss_pred HHHHhcc-chhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCC-eEEEE-cCCcc
Q 019157 186 NRVLLKG-RDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA-KFVGH-SGGRW 262 (345)
Q Consensus 186 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~-~~~~i-~~GH~ 262 (345)
|...... ......++..+..++. .... ..+ ++|+++-.|-.|..++....-.....++.- +++++ ..||.
T Consensus 231 ~~~~~d~~~~~~~~v~~~L~Y~D~----~nfA--~ri-~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He 303 (320)
T PF05448_consen 231 YFRWRDPHHEREPEVFETLSYFDA----VNFA--RRI-KCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHE 303 (320)
T ss_dssp HHHHHSCTHCHHHHHHHHHHTT-H----HHHG--GG---SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SS
T ss_pred HHhccCCCcccHHHHHHHHhhhhH----HHHH--HHc-CCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCC
Confidence 3331111 1112222222222221 1111 333 599999999944444445555666666644 56666 77885
Q ss_pred ccccCHHHHHHHHHHHHHc
Q 019157 263 PQVDSADELAKHIADFVSS 281 (345)
Q Consensus 263 ~~~e~pe~v~~~I~~fl~~ 281 (345)
...+ .-.+...+||.+
T Consensus 304 ~~~~---~~~~~~~~~l~~ 319 (320)
T PF05448_consen 304 YGPE---FQEDKQLNFLKE 319 (320)
T ss_dssp TTHH---HHHHHHHHHHHH
T ss_pred chhh---HHHHHHHHHHhc
Confidence 4432 225666666653
No 110
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.19 E-value=8.2e-05 Score=71.92 Aligned_cols=52 Identities=8% Similarity=-0.049 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHH-------cCCCcEEEEEeCchHHHHHHHHHHC----------CCccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDT-------FNLAPVHLVLHDSALPMSANWVAEN----------PGSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~A~~~----------p~~v~~lvli~~~~ 141 (345)
+++++++.++++. +...+++|+||||||..+..+|.+- +-.++++++-++..
T Consensus 148 ~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 148 SEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 4566666666652 3447999999999999998888652 12467888888764
No 111
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.18 E-value=7.3e-05 Score=60.05 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
.++...+.++...+.-.|.++-|+||||-++.++|..-...|.+|++++=+
T Consensus 73 ~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYP 123 (213)
T COG3571 73 PEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYP 123 (213)
T ss_pred HHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCc
Confidence 578888999999888789999999999999999998877779999988743
No 112
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.10 E-value=5.8e-05 Score=64.98 Aligned_cols=52 Identities=8% Similarity=0.117 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHH-----cCCCcEEEEEeCchHHHHHHHHHHCCC----ccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDT-----FNLAPVHLVLHDSALPMSANWVAENPG----SVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~-----l~~~~~~lvGhS~Gg~ia~~~A~~~p~----~v~~lvli~~~~ 141 (345)
++..+.+..+++. .+.++++|+|+|.||.+++.++....+ .+++++++.|..
T Consensus 50 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 5667777777766 445799999999999999999975443 389999999853
No 113
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.10 E-value=8.6e-05 Score=69.77 Aligned_cols=96 Identities=19% Similarity=0.300 Sum_probs=72.8
Q ss_pred hhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccc-cccchhhhhccCchhHHHHHHhhhhhccc
Q 019157 4 SLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGF-FWAFDQIVETGQIPYEEILKARVLERKSV 82 (345)
Q Consensus 4 ~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 82 (345)
.|+.+||.|..-..||.-.|.+-..... ...- ||.|+ ++
T Consensus 101 ~LadaGYDVWLgN~RGn~ySr~h~~l~~------------------~~~~~FW~FS-----------------~~----- 140 (403)
T KOG2624|consen 101 LLADAGYDVWLGNNRGNTYSRKHKKLSP------------------SSDKEFWDFS-----------------WH----- 140 (403)
T ss_pred HHHHcCCceeeecCcCcccchhhcccCC------------------cCCcceeecc-----------------hh-----
Confidence 5788999999999999888865322110 0012 77772 11
Q ss_pred cccccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC---ccceEEEEeCCCC
Q 019157 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTGIK 142 (345)
Q Consensus 83 ~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvli~~~~~ 142 (345)
+....|+.+.|.-+++.-+.++++.||||.|+.+....++..|+ +|+.+++++|...
T Consensus 141 ---Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 141 ---EMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred ---hhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 23346677778888888888999999999999999999998876 7999999999863
No 114
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.06 E-value=0.0001 Score=60.36 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHHH
Q 019157 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQW 168 (345)
Q Consensus 89 ~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (345)
.++.++.+..-+... -++++||+||+|+..++.++.+....|++++|++|+-......+
T Consensus 43 ~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~-------------------- 101 (181)
T COG3545 43 LDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR-------------------- 101 (181)
T ss_pred HHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccc--------------------
Confidence 355666666666555 36799999999999999999988889999999998743211000
Q ss_pred HHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcch--HhHHHHH
Q 019157 169 LIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWS--EEGSRVA 246 (345)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~--~~~~~~~ 246 (345)
+ .. ...+... +. ..+ .-|.++|.++ +|.++ +.++.++
T Consensus 102 ----------~-----~~----------------~~tf~~~-p~------~~l-pfps~vvaSr--nDp~~~~~~a~~~a 140 (181)
T COG3545 102 ----------P-----KH----------------LMTFDPI-PR------EPL-PFPSVVVASR--NDPYVSYEHAEDLA 140 (181)
T ss_pred ----------h-----hh----------------ccccCCC-cc------ccC-CCceeEEEec--CCCCCCHHHHHHHH
Confidence 0 00 0000000 00 222 2589999999 56555 8889999
Q ss_pred hhCCCCeEEEE-cCCcccccc---CHHHHHHHHHHHHHc
Q 019157 247 DALPQAKFVGH-SGGRWPQVD---SADELAKHIADFVSS 281 (345)
Q Consensus 247 ~~~~~~~~~~i-~~GH~~~~e---~pe~v~~~I~~fl~~ 281 (345)
+... +.++.+ ++||+.-.+ .=.+....+.+|+.+
T Consensus 141 ~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 141 NAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred Hhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 9886 567777 899975432 223445666666654
No 115
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.06 E-value=9.1e-05 Score=65.62 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC-----ccceEEEEeCCCC
Q 019157 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG-----SVKSLTLLDTGIK 142 (345)
Q Consensus 92 ~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~-----~v~~lvli~~~~~ 142 (345)
+...|..+-++.+++++.+|||||||..++.++..+.. +|.++|.|+++..
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 33334444455688999999999999999999988643 5899999998753
No 116
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.00 E-value=7.7e-05 Score=65.07 Aligned_cols=142 Identities=9% Similarity=-0.041 Sum_probs=75.5
Q ss_pred CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHHHHHHHhhhcCCChhhH
Q 019157 104 NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVGSFDV 183 (345)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (345)
.-+++.+.|.|.||.+++.+|+..| +|++++.+=|.... ++.+... .. .-+-.++
T Consensus 174 de~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~d-f~r~i~~-~~----------------------~~~ydei 228 (321)
T COG3458 174 DEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSD-FPRAIEL-AT----------------------EGPYDEI 228 (321)
T ss_pred chhheEEeccccCchhhhhhhhcCh-hhhccccccccccc-chhheee-cc----------------------cCcHHHH
Confidence 3468999999999999999999877 68888877665432 2211110 00 0011122
Q ss_pred HHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE--cCCc
Q 019157 184 EDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH--SGGR 261 (345)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i--~~GH 261 (345)
..|.+..... ....+..+.-++. .. ...++ ++|+|+..|--|.-++....-.+...++..+...+ .-+|
T Consensus 229 ~~y~k~h~~~--e~~v~~TL~yfD~----~n--~A~Ri-K~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aH 299 (321)
T COG3458 229 QTYFKRHDPK--EAEVFETLSYFDI----VN--LAARI-KVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAH 299 (321)
T ss_pred HHHHHhcCch--HHHHHHHHhhhhh----hh--HHHhh-ccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecccc
Confidence 2222211111 1112222221111 11 01333 58999999994443444555566667776655544 3345
Q ss_pred cccccCHHHHHHHHHHHHHcC
Q 019157 262 WPQVDSADELAKHIADFVSSL 282 (345)
Q Consensus 262 ~~~~e~pe~v~~~I~~fl~~~ 282 (345)
++-|.-.++.+..|++.+
T Consensus 300 ---e~~p~~~~~~~~~~l~~l 317 (321)
T COG3458 300 ---EGGPGFQSRQQVHFLKIL 317 (321)
T ss_pred ---ccCcchhHHHHHHHHHhh
Confidence 444555666667777653
No 117
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.93 E-value=0.00034 Score=61.56 Aligned_cols=50 Identities=16% Similarity=0.080 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHc---C---CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 90 DEVGRVLGQVIDTF---N---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 90 ~~~~~~l~~ll~~l---~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
.+...++.+.++.| . .+++.++|.||||.+++.++.+.| .|++.+..-+.
T Consensus 90 ~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~ 145 (236)
T COG0412 90 AEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGG 145 (236)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCC
Confidence 44555555555544 2 357999999999999999999988 68887765543
No 118
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.92 E-value=1.5e-05 Score=69.01 Aligned_cols=35 Identities=3% Similarity=0.114 Sum_probs=31.1
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
+++.|+|.|.||.+|+.+|+.+| .|+.+|.+++..
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 58999999999999999999999 799999999874
No 119
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.92 E-value=8e-05 Score=64.03 Aligned_cols=79 Identities=20% Similarity=0.152 Sum_probs=44.3
Q ss_pred cchhhccCceEEEeeCCCC-CCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhc
Q 019157 2 INSLRSKKFNVIAVDLPGN-GFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (345)
Q Consensus 2 i~~L~~~G~~vi~~Dl~G~-G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 80 (345)
+.+|+..||+||.+|-.-| |.|+....
T Consensus 50 A~YL~~NGFhViRyDsl~HvGlSsG~I~---------------------------------------------------- 77 (294)
T PF02273_consen 50 AEYLSANGFHVIRYDSLNHVGLSSGDIN---------------------------------------------------- 77 (294)
T ss_dssp HHHHHTTT--EEEE---B--------------------------------------------------------------
T ss_pred HHHHhhCCeEEEeccccccccCCCCChh----------------------------------------------------
Confidence 5678999999999998876 88887432
Q ss_pred cccccccChHHHHHHHHHHHH---HcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 81 SVKVIELGSDEVGRVLGQVID---TFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~---~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
.+++....+++..+++ ..|+.++-|+.-|+.|-||+..|++- .+.-+|..-+
T Consensus 78 -----eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVG 132 (294)
T PF02273_consen 78 -----EFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVG 132 (294)
T ss_dssp --------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES-
T ss_pred -----hcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEee
Confidence 4555666777766665 45778899999999999999999853 3666665543
No 120
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.91 E-value=1.2e-05 Score=57.84 Aligned_cols=25 Identities=28% Similarity=0.422 Sum_probs=22.6
Q ss_pred CcchhhccCceEEEeeCCCCCCCCC
Q 019157 1 MINSLRSKKFNVIAVDLPGNGFSDR 25 (345)
Q Consensus 1 ~i~~L~~~G~~vi~~Dl~G~G~S~~ 25 (345)
+++.|.++||.|+++|+||||.|+.
T Consensus 35 ~a~~L~~~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 35 LAEFLAEQGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred HHHHHHhCCCEEEEECCCcCCCCCC
Confidence 3578999999999999999999986
No 121
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.79 E-value=8.4e-05 Score=64.86 Aligned_cols=51 Identities=18% Similarity=0.151 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHc-----CCCcEEEEEeCchHHHHHHHHHHCC---CccceEEEEeCCC
Q 019157 91 EVGRVLGQVIDTF-----NLAPVHLVLHDSALPMSANWVAENP---GSVKSLTLLDTGI 141 (345)
Q Consensus 91 ~~~~~l~~ll~~l-----~~~~~~lvGhS~Gg~ia~~~A~~~p---~~v~~lvli~~~~ 141 (345)
.+.+.+..+++.. +.++++||||||||.++..++...+ +.|+.+|.++++-
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 4455555665555 5579999999999999988886543 4799999999874
No 122
>PRK10115 protease 2; Provisional
Probab=97.77 E-value=0.0012 Score=67.07 Aligned_cols=53 Identities=2% Similarity=-0.129 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHHHcC---CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 88 GSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
+++|+++.+..+++. + .+++.+.|.|.||.++..++.++|++++++|...|..
T Consensus 504 ~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 504 TFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred cHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 457888888888765 4 3689999999999999999999999999999887653
No 123
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.76 E-value=6.9e-05 Score=67.33 Aligned_cols=47 Identities=19% Similarity=0.049 Sum_probs=36.7
Q ss_pred HHHHHH-HHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 93 GRVLGQ-VIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 93 ~~~l~~-ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
++.+.+ .|..|+. +.++|.|+|.||..++.+|+.||+ |+++|+-++.
T Consensus 295 ~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 295 ADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 333433 3456664 679999999999999999999998 8888877654
No 124
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.73 E-value=0.00052 Score=62.31 Aligned_cols=42 Identities=14% Similarity=0.102 Sum_probs=27.7
Q ss_pred CCCEEEEEecCCCCcchH----hHHHHHhhC-CCCeEEEE-cCCcccc
Q 019157 223 GIPMQILWSSVWSKEWSE----EGSRVADAL-PQAKFVGH-SGGRWPQ 264 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~----~~~~~~~~~-~~~~~~~i-~~GH~~~ 264 (345)
++|++|.+|..|...+.. ..+++.+.- .+.+++.+ ..+|...
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 689999999955544443 344555554 45667777 6799754
No 125
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.73 E-value=8.7e-05 Score=65.35 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=33.7
Q ss_pred CCCcEEEEEeCchHHHHHHHHHHC-----CCccceEEEEeCCC
Q 019157 104 NLAPVHLVLHDSALPMSANWVAEN-----PGSVKSLTLLDTGI 141 (345)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~A~~~-----p~~v~~lvli~~~~ 141 (345)
+..++.|.|||-||-++..++..+ +.+++++|+++|.-
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 446899999999999999999987 56899999999974
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00011 Score=61.52 Aligned_cols=129 Identities=13% Similarity=0.066 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHcC-CCcEEEEEeCchHHHHHHHHHHCC-CccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHH
Q 019157 90 DEVGRVLGQVIDTFN-LAPVHLVLHDSALPMSANWVAENP-GSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQ 167 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~-~~~~~lvGhS~Gg~ia~~~A~~~p-~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (345)
.++..-+.-+++... .+.+.+-|||.|+.+++.+..+.. -+|.++++.+.... ++
T Consensus 119 ~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~-----------------------l~ 175 (270)
T KOG4627|consen 119 TQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD-----------------------LR 175 (270)
T ss_pred HHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh-----------------------HH
Confidence 556666666666554 356778899999999999887633 36777776665421 11
Q ss_pred HHHHHhhhc--CCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHHHH
Q 019157 168 WLIRFCCMK--KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRV 245 (345)
Q Consensus 168 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~ 245 (345)
.+....... .++....+ .. +.+. ..+..+ ++|++|+.++.+.-..++..+.+
T Consensus 176 EL~~te~g~dlgLt~~~ae---------------------~~-Scdl---~~~~~v-~~~ilVv~~~~espklieQnrdf 229 (270)
T KOG4627|consen 176 ELSNTESGNDLGLTERNAE---------------------SV-SCDL---WEYTDV-TVWILVVAAEHESPKLIEQNRDF 229 (270)
T ss_pred HHhCCccccccCcccchhh---------------------hc-CccH---HHhcCc-eeeeeEeeecccCcHHHHhhhhH
Confidence 111100000 01110000 00 0011 111333 48999999996555556889999
Q ss_pred HhhCCCCeEEEE-cCCccccccC
Q 019157 246 ADALPQAKFVGH-SGGRWPQVDS 267 (345)
Q Consensus 246 ~~~~~~~~~~~i-~~GH~~~~e~ 267 (345)
++....+++..+ +.+|+-.+++
T Consensus 230 ~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 230 ADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred HHHhhhcceeecCCcchhhHHHH
Confidence 999999999999 7799876654
No 127
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.56 E-value=0.00025 Score=61.40 Aligned_cols=110 Identities=17% Similarity=0.212 Sum_probs=62.4
Q ss_pred ChHHHHHHHHHHHHHcCCCcE-EEEEeCchHHHHHHHHHHCC--------CccceEEEEeCCCCCCchhhhcchhhHHHh
Q 019157 88 GSDEVGRVLGQVIDTFNLAPV-HLVLHDSALPMSANWVAENP--------GSVKSLTLLDTGIKPALPLFALNLPLIRDF 158 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~~~~~-~lvGhS~Gg~ia~~~A~~~p--------~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 158 (345)
++++..+.|.++++..| |+ -|+|.|.||.+|..++.... -.++-+|++++..+....
T Consensus 85 ~~~~sl~~l~~~i~~~G--PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENG--PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp --HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred CHHHHHHHHHHHHHhcC--CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 44666777777777766 43 49999999999999886421 236777777665421000
Q ss_pred hhcchhHHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcc
Q 019157 159 VLGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEW 238 (345)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~ 238 (345)
....+ ....+ ++|+|-|+|+ .|.+
T Consensus 151 -----------------------------------------------~~~~~------~~~~i-~iPtlHv~G~--~D~~ 174 (212)
T PF03959_consen 151 -----------------------------------------------YQELY------DEPKI-SIPTLHVIGE--NDPV 174 (212)
T ss_dssp -----------------------------------------------GTTTT--------TT----EEEEEEET--T-SS
T ss_pred -----------------------------------------------hhhhh------ccccC-CCCeEEEEeC--CCCC
Confidence 00000 01233 5899999999 7777
Q ss_pred h--HhHHHHHhhCCC-CeEEEEcCCccccccC
Q 019157 239 S--EEGSRVADALPQ-AKFVGHSGGRWPQVDS 267 (345)
Q Consensus 239 ~--~~~~~~~~~~~~-~~~~~i~~GH~~~~e~ 267 (345)
+ +..+.+.+...+ .+++..++||.++...
T Consensus 175 ~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~~~ 206 (212)
T PF03959_consen 175 VPPERSEALAEMFDPDARVIEHDGGHHVPRKK 206 (212)
T ss_dssp S-HHHHHHHHHHHHHHEEEEEESSSSS----H
T ss_pred cchHHHHHHHHhccCCcEEEEECCCCcCcCCh
Confidence 7 477888888776 6666779999887654
No 128
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.55 E-value=0.0017 Score=56.53 Aligned_cols=168 Identities=11% Similarity=0.038 Sum_probs=88.1
Q ss_pred HcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcc--hh---hHHHhhhcchhHHHHHHHHhhhc
Q 019157 102 TFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALN--LP---LIRDFVLGSSFGYQWLIRFCCMK 176 (345)
Q Consensus 102 ~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~ 176 (345)
..|..++.|+|-||||.+|....+.++..|.-+=++++.... +..... .+ .+.+.... .....+ .+
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~as--vs~teg~l~~~~s~~~~~~~~--t~~~~~-----~~ 261 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKAS--VSATEGLLLQDTSKMKRFNQT--TNKSGY-----TS 261 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccc--hhhhhhhhhhhhHHHHhhccC--cchhhh-----hh
Confidence 456789999999999999999999888766666555554211 100000 00 00000000 000000 01
Q ss_pred CCChhhHHHHHHHhccchhHHHHHHHHHhhccccc-hhhcccccccCCCCEEEEEecCCCCcch--HhHHHHHhhCCCCe
Q 019157 177 KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFD-MAEWGSSEGIKGIPMQILWSSVWSKEWS--EEGSRVADALPQAK 253 (345)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~PvliI~G~~D~D~~~--~~~~~~~~~~~~~~ 253 (345)
..+...+.... ....+.+......+++.....+. ...+ +--.+ |-++|.-..+.|..+ .....+.+..|+++
T Consensus 262 r~p~Q~~~~~~-~~~srn~~~E~~~~Mr~vmd~~T~v~~f---p~Pvd-psl~ivv~A~~D~Yipr~gv~~lQ~~WPg~e 336 (371)
T KOG1551|consen 262 RNPAQSYHLLS-KEQSRNSRKESLIFMRGVMDECTHVANF---PVPVD-PSLIIVVQAKEDAYIPRTGVRSLQEIWPGCE 336 (371)
T ss_pred hCchhhHHHHH-HHhhhcchHHHHHHHHHHHHhhchhhcC---CCCCC-CCeEEEEEecCCccccccCcHHHHHhCCCCE
Confidence 11111111111 11111222333333333322111 1111 11111 445444443366655 56788889999999
Q ss_pred EEEEcCCcc-ccccCHHHHHHHHHHHHHcCC
Q 019157 254 FVGHSGGRW-PQVDSADELAKHIADFVSSLP 283 (345)
Q Consensus 254 ~~~i~~GH~-~~~e~pe~v~~~I~~fl~~~~ 283 (345)
+..+++||. ..+-+.+.+.+.|.+-|+++.
T Consensus 337 Vr~~egGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 337 VRYLEGGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEeecCceeeeehhchHHHHHHHHHHHhhh
Confidence 999999996 456788999999999998754
No 129
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.38 E-value=0.0036 Score=60.90 Aligned_cols=52 Identities=10% Similarity=-0.048 Sum_probs=42.6
Q ss_pred ChHHHHHHHHHHHHHcC---CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 88 GSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
.++|.++-+.-+.++.| .++|.+-|+|+||.++++...++|+-++..|.-+|
T Consensus 706 E~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGap 760 (867)
T KOG2281|consen 706 EVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAP 760 (867)
T ss_pred eehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCc
Confidence 45788888888888875 47899999999999999999999997666654444
No 130
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.26 E-value=0.00099 Score=61.59 Aligned_cols=34 Identities=6% Similarity=-0.228 Sum_probs=26.0
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
+++.++|+||||..++.+|+.-+ +|+..|..+..
T Consensus 226 ~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~l 259 (390)
T PF12715_consen 226 DRIGCMGFSMGGYRAWWLAALDD-RIKATVANGYL 259 (390)
T ss_dssp EEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-B
T ss_pred cceEEEeecccHHHHHHHHHcch-hhHhHhhhhhh
Confidence 68999999999999999999864 78888877654
No 131
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.23 E-value=0.0007 Score=55.25 Aligned_cols=47 Identities=9% Similarity=0.055 Sum_probs=34.4
Q ss_pred HHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC----ccceEEEEeCCC
Q 019157 95 VLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG----SVKSLTLLDTGI 141 (345)
Q Consensus 95 ~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~----~v~~lvli~~~~ 141 (345)
.+...+......+++++|||+||.+|..++..... .+..++..+++.
T Consensus 17 ~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 17 LLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 33333333456799999999999999999987754 566777777664
No 132
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.19 E-value=0.00049 Score=59.53 Aligned_cols=48 Identities=13% Similarity=0.218 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
.++++.|.++++.-|- +|.||||||||.++-.+.... .-++..+-+.+
T Consensus 60 ~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~-~~~d~~~~lg~ 107 (219)
T PF01674_consen 60 KQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG-GGADKVVNLGP 107 (219)
T ss_dssp HHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC-TGGGTEEE---
T ss_pred HHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc-CCCCcccCccc
Confidence 4677778888888888 999999999999998888654 33444444433
No 133
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.18 E-value=0.016 Score=53.11 Aligned_cols=52 Identities=2% Similarity=-0.033 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHH---cC--CCcEEEEEeCchHHHHHHHHHHCCC----ccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDT---FN--LAPVHLVLHDSALPMSANWVAENPG----SVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~---l~--~~~~~lvGhS~Gg~ia~~~A~~~p~----~v~~lvli~~~~ 141 (345)
++..+.+..+.++ ++ .+++.|+|+|.||.+++.++..-.+ .....+++.|..
T Consensus 131 ~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 131 EDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred HHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 4555555555544 44 4689999999999999999976554 467888888874
No 134
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.16 E-value=0.0095 Score=50.79 Aligned_cols=55 Identities=22% Similarity=0.427 Sum_probs=41.9
Q ss_pred CCCEEEEEecCCCCcch--HhHHHHHhhCCCCeEEEEcCCccccccCHHHHHHHHHHHHHc
Q 019157 223 GIPMQILWSSVWSKEWS--EEGSRVADALPQAKFVGHSGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~--~~~~~~~~~~~~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
++|.|-|.|+ .|.++ ..+..+++..+++.++..++||+++-.. ...+.|.+|++.
T Consensus 163 ~~PSLHi~G~--~D~iv~~~~s~~L~~~~~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 163 STPSLHIFGE--TDTIVPSERSEQLAESFKDATVLEHPGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred CCCeeEEecc--cceeecchHHHHHHHhcCCCeEEecCCCccCCCch--HHHHHHHHHHHH
Confidence 5899999999 66666 6779999999999555559999988655 445555555554
No 135
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.10 E-value=0.017 Score=55.04 Aligned_cols=56 Identities=20% Similarity=0.203 Sum_probs=38.3
Q ss_pred CCCEEEEEecCCCCcch--HhHHHHHhhC--------------------------CCCeEEEE-cCCccccccCHHHHHH
Q 019157 223 GIPMQILWSSVWSKEWS--EEGSRVADAL--------------------------PQAKFVGH-SGGRWPQVDSADELAK 273 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~--~~~~~~~~~~--------------------------~~~~~~~i-~~GH~~~~e~pe~v~~ 273 (345)
.++|||..|. .|..+ -..+.+.+.+ .+..++.+ ++||+++.++|++..+
T Consensus 330 ~irVLiy~Gd--~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~ 407 (415)
T PF00450_consen 330 GIRVLIYNGD--LDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQ 407 (415)
T ss_dssp T-EEEEEEET--T-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHH
T ss_pred cceeEEeccC--CCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHH
Confidence 3899999999 55544 3344444432 12346677 9999999999999999
Q ss_pred HHHHHHH
Q 019157 274 HIADFVS 280 (345)
Q Consensus 274 ~I~~fl~ 280 (345)
.|..||+
T Consensus 408 m~~~fl~ 414 (415)
T PF00450_consen 408 MFRRFLK 414 (415)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999985
No 136
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.06 E-value=0.0028 Score=57.50 Aligned_cols=23 Identities=13% Similarity=0.005 Sum_probs=19.4
Q ss_pred CcEEEEEeCchHHHHHHHHHHCC
Q 019157 106 APVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
+.+++-|||+||.++..++.++.
T Consensus 215 ~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 215 KNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred heEEEeeccccHHHHHHHHHhcc
Confidence 68999999999999998666543
No 137
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.02 E-value=0.018 Score=59.13 Aligned_cols=151 Identities=9% Similarity=0.003 Sum_probs=84.7
Q ss_pred ChHHHHHHHHHHHHHcC--CCcEEEEEeCchHHHHHHHHHHCCCccceE-EEEeCCCCCCchhhhcchhhHHHhhhcchh
Q 019157 88 GSDEVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAENPGSVKSL-TLLDTGIKPALPLFALNLPLIRDFVLGSSF 164 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~--~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~l-vli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (345)
.++|....+..+++..- .+++.+.|+|.||.+++..+...|+.+-+. +.++|...-... .. .
T Consensus 588 ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~y----ds-----------~ 652 (755)
T KOG2100|consen 588 EVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYY----DS-----------T 652 (755)
T ss_pred chHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeee----cc-----------c
Confidence 34566666666666543 358999999999999999999998655444 888886421111 00 0
Q ss_pred HHHHHHHHhhhcCCChhhHHHHHHHhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHHH
Q 019157 165 GYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSR 244 (345)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~ 244 (345)
..++++ ..+......|. ..... .....+++.-.|+|+|+.|.-...+.+..
T Consensus 653 ~terym------g~p~~~~~~y~-----------------e~~~~------~~~~~~~~~~~LliHGt~DdnVh~q~s~~ 703 (755)
T KOG2100|consen 653 YTERYM------GLPSENDKGYE-----------------ESSVS------SPANNIKTPKLLLIHGTEDDNVHFQQSAI 703 (755)
T ss_pred ccHhhc------CCCccccchhh-----------------hcccc------chhhhhccCCEEEEEcCCcCCcCHHHHHH
Confidence 001000 00111000011 00000 00122333235999999544443465555
Q ss_pred HHhhCC----CCeEEEE-cCCccccccCH-HHHHHHHHHHHHcC
Q 019157 245 VADALP----QAKFVGH-SGGRWPQVDSA-DELAKHIADFVSSL 282 (345)
Q Consensus 245 ~~~~~~----~~~~~~i-~~GH~~~~e~p-e~v~~~I~~fl~~~ 282 (345)
+.+.+. ..++.++ +..|.+-.-.+ ..+...+..|+...
T Consensus 704 ~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 704 LIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred HHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 555442 2577788 88998876553 56778888888743
No 138
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.99 E-value=0.0015 Score=56.92 Aligned_cols=38 Identities=16% Similarity=0.074 Sum_probs=32.2
Q ss_pred CCCcEEEEEeCchHHHHHHHHHHCC-C-ccceEEEEeCCC
Q 019157 104 NLAPVHLVLHDSALPMSANWVAENP-G-SVKSLTLLDTGI 141 (345)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~A~~~p-~-~v~~lvli~~~~ 141 (345)
++.++.|+|||.||-.|..+|..+. + .+++||-+||..
T Consensus 118 nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 118 NLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred ccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 3468999999999999999999874 2 588999999874
No 139
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.99 E-value=0.033 Score=48.40 Aligned_cols=189 Identities=11% Similarity=0.011 Sum_probs=101.4
Q ss_pred ccChHHHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHH-CCC-ccceEEEEeCCCCCC--ch-hhhc--chhhHH
Q 019157 86 ELGSDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAE-NPG-SVKSLTLLDTGIKPA--LP-LFAL--NLPLIR 156 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~-~p~-~v~~lvli~~~~~~~--~~-~~~~--~~~~~~ 156 (345)
-+++++.++.-.++++..-. .+++++|||.|+.+.+.+... .++ .|.+.+++=|..... .+ .+.. ....+.
T Consensus 88 ifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~ 167 (301)
T KOG3975|consen 88 IFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLP 167 (301)
T ss_pred ccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeeh
Confidence 57788899988888876532 589999999999999998874 332 588888887763211 00 0000 000000
Q ss_pred Hh-------hh-cchhHHHHHHHHhh--hcCCChhhHHHHHHHhccchhHHHHHH-HHHhhccccchhhcccccccCCCC
Q 019157 157 DF-------VL-GSSFGYQWLIRFCC--MKKVGSFDVEDNRVLLKGRDRCRAVSE-MGRKLNNSFDMAEWGSSEGIKGIP 225 (345)
Q Consensus 157 ~~-------~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P 225 (345)
.. +. -.+.+.+.++-... ....+++...... .+..+...+.... ....+........ +..+.- .+-
T Consensus 168 hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal-~l~h~~v~rn~v~la~qEm~eV~~~d~-e~~een-~d~ 244 (301)
T KOG3975|consen 168 HVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTAL-FLTHPQVVRNSVGLAAQEMEEVTTRDI-EYCEEN-LDS 244 (301)
T ss_pred hhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHH-HhhcHHHHHHHhhhchHHHHHHHHhHH-HHHHhc-CcE
Confidence 00 00 01222222222111 1222222221111 1111111111110 0111111001110 111121 257
Q ss_pred EEEEEecCCCCcch--HhHHHHHhhCCCCeEEEE--cCCccccccCHHHHHHHHHHHH
Q 019157 226 MQILWSSVWSKEWS--EEGSRVADALPQAKFVGH--SGGRWPQVDSADELAKHIADFV 279 (345)
Q Consensus 226 vliI~G~~D~D~~~--~~~~~~~~~~~~~~~~~i--~~GH~~~~e~pe~v~~~I~~fl 279 (345)
+.+..|. .|.|+ .....+++.+|..++..= +.-|.+...+.+..+..+.+.+
T Consensus 245 l~Fyygt--~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 245 LWFYYGT--NDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred EEEEccC--CCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 7889999 88888 778999999998776654 6899999999899888887765
No 140
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.98 E-value=0.0015 Score=60.56 Aligned_cols=52 Identities=17% Similarity=0.110 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCC--CccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENP--GSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p--~~v~~lvli~~~~ 141 (345)
+.+..-+.+++...+..++.|+||||||.++..++...+ .+|++++.++++-
T Consensus 111 ~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 111 EQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred HHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 566667777777788899999999999999999999998 8999999999874
No 141
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.95 E-value=0.0022 Score=59.22 Aligned_cols=52 Identities=19% Similarity=0.231 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHcC--CCcEEEEEeCchHHHHHHHHHHCCC--ccceEEEEeCCCC
Q 019157 91 EVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAENPG--SVKSLTLLDTGIK 142 (345)
Q Consensus 91 ~~~~~l~~ll~~l~--~~~~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvli~~~~~ 142 (345)
.+++.|..+.+..+ .++++|||||+||.||-.++..... +|.+++-+||+.+
T Consensus 133 ~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 133 QLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 44444555554433 4799999999999999999998887 8999999999864
No 142
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.91 E-value=0.0046 Score=54.25 Aligned_cols=52 Identities=12% Similarity=0.207 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHH----CC-----CccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE----NP-----GSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~----~p-----~~v~~lvli~~~~ 141 (345)
..+.+.|..+.+..+..+++|++||||+.+.+..... .+ .++..+|+++|-.
T Consensus 77 ~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 77 PALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred HHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 5667777666666678899999999999999886543 22 2577888887654
No 143
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.90 E-value=0.022 Score=53.06 Aligned_cols=161 Identities=9% Similarity=0.010 Sum_probs=91.9
Q ss_pred HHHHHHHHHHc---CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCCchhhhcchhhHHHhhhcchhHHHHH
Q 019157 93 GRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWL 169 (345)
Q Consensus 93 ~~~l~~ll~~l---~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.+.+.+++++. .+++++|.|.|==|..++..|+ -..||.+++-+.-...... ..++..
T Consensus 156 MD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~------------------~~l~h~ 216 (367)
T PF10142_consen 156 MDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMK------------------ANLEHQ 216 (367)
T ss_pred HHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcH------------------HHHHHH
Confidence 33444555544 6789999999999999999998 5568888875543322111 112222
Q ss_pred HHHhhhcCCChhhHHHHHH-HhccchhHHHHHHHHHhhccccchhhcccccccCCCCEEEEEecCCCCcchHhHHHHHhh
Q 019157 170 IRFCCMKKVGSFDVEDNRV-LLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADA 248 (345)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~D~~~~~~~~~~~~ 248 (345)
++.... ..+. .+..|.. .+...-....+.......+ .-.+. .++ ++|.+||.|.+|+-.+.+....+-+.
T Consensus 217 y~~yG~-~ws~-a~~dY~~~gi~~~l~tp~f~~L~~ivD----P~~Y~--~rL-~~PK~ii~atgDeFf~pD~~~~y~d~ 287 (367)
T PF10142_consen 217 YRSYGG-NWSF-AFQDYYNEGITQQLDTPEFDKLMQIVD----PYSYR--DRL-TMPKYIINATGDEFFVPDSSNFYYDK 287 (367)
T ss_pred HHHhCC-CCcc-chhhhhHhCchhhcCCHHHHHHHHhcC----HHHHH--Hhc-CccEEEEecCCCceeccCchHHHHhh
Confidence 222220 1111 1111111 0110001111222222111 11111 344 59999999997665666889999999
Q ss_pred CCCCeEEEE--cCCccccccCHHHHHHHHHHHHHcCCc
Q 019157 249 LPQAKFVGH--SGGRWPQVDSADELAKHIADFVSSLPK 284 (345)
Q Consensus 249 ~~~~~~~~i--~~GH~~~~e~pe~v~~~I~~fl~~~~~ 284 (345)
+|+-+...+ +++|..-. ..+.+.|..|+..+..
T Consensus 288 L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 288 LPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQN 322 (367)
T ss_pred CCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHc
Confidence 998766555 89998776 6777888888887543
No 144
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.83 E-value=0.0052 Score=46.57 Aligned_cols=59 Identities=17% Similarity=0.191 Sum_probs=50.5
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
..|+|+|.++.|...+.+.++.+++.+++++++++ +.||......-.-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 47999999995555666999999999999999999 789988865557789999999985
No 145
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.80 E-value=0.06 Score=49.72 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=43.1
Q ss_pred cccChHHHHHHHHHHHHH------cCCCcEEEEEeCchHHHHHHHHHHC------CCccceEEEEeCCCC
Q 019157 85 IELGSDEVGRVLGQVIDT------FNLAPVHLVLHDSALPMSANWVAEN------PGSVKSLTLLDTGIK 142 (345)
Q Consensus 85 ~~~~~~~~~~~l~~ll~~------l~~~~~~lvGhS~Gg~ia~~~A~~~------p~~v~~lvli~~~~~ 142 (345)
+.-..+|-.+.+.-++++ .+.+++.|+|=|.||.||..+|.+. +-++++.|++-|...
T Consensus 139 ~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 139 FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 344456666666666653 3457899999999999999988753 347899999998753
No 146
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.77 E-value=0.0022 Score=60.84 Aligned_cols=52 Identities=21% Similarity=0.162 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHc---CCCcEEEEEeCchHHHHHHHHHHCCC------ccceEEEEeCCCC
Q 019157 91 EVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAENPG------SVKSLTLLDTGIK 142 (345)
Q Consensus 91 ~~~~~l~~ll~~l---~~~~~~lvGhS~Gg~ia~~~A~~~p~------~v~~lvli~~~~~ 142 (345)
++...|.++|+.. ...||+||||||||.++..+....+. .|+++|.++++..
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 5566666666533 34799999999999999999988753 5999999998853
No 147
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.75 E-value=0.0088 Score=51.06 Aligned_cols=33 Identities=9% Similarity=0.025 Sum_probs=25.5
Q ss_pred CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEe
Q 019157 105 LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLD 138 (345)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~ 138 (345)
..++-++|.+|||-++..+....| .+.+.+..=
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~h 151 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFH 151 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch-hheeeeEec
Confidence 467889999999999888887777 566666543
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=96.72 E-value=0.0026 Score=56.20 Aligned_cols=52 Identities=8% Similarity=0.019 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHH-HcCCC--cEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 90 DEVGRVLGQVID-TFNLA--PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~-~l~~~--~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
+.+.++|...|+ .+.+. +..|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 445666666665 44443 26899999999999999999999999999999764
No 149
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.71 E-value=0.2 Score=48.25 Aligned_cols=55 Identities=15% Similarity=0.091 Sum_probs=43.8
Q ss_pred cChHHHHHHHHHHHHHc-----CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 87 LGSDEVGRVLGQVIDTF-----NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l-----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
-|++++.....++++.. +..+++|||.+-||..++.+|+.+|+.+.-+|+-+++.
T Consensus 116 QTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 116 QTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 35566666666666543 22489999999999999999999999999999988774
No 150
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.62 E-value=0.0073 Score=58.17 Aligned_cols=56 Identities=13% Similarity=0.023 Sum_probs=40.8
Q ss_pred cChHHHHHHHHHHHHHcC-------CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 87 LGSDEVGRVLGQVIDTFN-------LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l~-------~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
++++...+|+..+++.+. -.|++++|-|+||++|..+-.+||+.|.+.+..+++..
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 566777777777776442 14899999999999999999999999999998888753
No 151
>PRK04940 hypothetical protein; Provisional
Probab=96.53 E-value=0.0082 Score=50.01 Aligned_cols=53 Identities=6% Similarity=-0.145 Sum_probs=38.9
Q ss_pred ChHHHHHHHHHHHHHc---C-CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC
Q 019157 88 GSDEVGRVLGQVIDTF---N-LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l---~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~ 143 (345)
.+++..+.+.+++..+ + .+++.|||.|+||+.|..+|.++.- +.|+++|...+
T Consensus 38 ~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g~---~aVLiNPAv~P 94 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCGI---RQVIFNPNLFP 94 (180)
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHCC---CEEEECCCCCh
Confidence 3445555566665531 1 1579999999999999999999873 78899998753
No 152
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.48 E-value=0.0074 Score=52.29 Aligned_cols=50 Identities=10% Similarity=0.123 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 92 VGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 92 ~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
++..+..++.+.++ ++|.+.|+|.||+++..++..+|+.+.++.+++...
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 44555556666655 589999999999999999999999999988887764
No 153
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.47 E-value=0.058 Score=46.35 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=30.3
Q ss_pred CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCCC
Q 019157 104 NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPA 144 (345)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~~ 144 (345)
+.+.+.||++|||-.+|..+....| +++.|.++....+.
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYPI 93 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCCc
Confidence 4578999999999999988866543 67778888776543
No 154
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.41 E-value=0.0074 Score=48.13 Aligned_cols=38 Identities=11% Similarity=0.147 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAEN 127 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 127 (345)
+.+.+.+..+++.....++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 46677777777777667899999999999999988753
No 155
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.25 E-value=0.011 Score=56.28 Aligned_cols=50 Identities=6% Similarity=-0.144 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHc-C----CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 91 EVGRVLGQVIDTF-N----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 91 ~~~~~l~~ll~~l-~----~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
.++++|.-.+++. . .++.+|+|+||||..|+.++.++|+++.+++.+++.
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 3445555555532 2 246889999999999999999999999999999875
No 156
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.15 E-value=0.023 Score=49.46 Aligned_cols=50 Identities=8% Similarity=0.021 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHC----CCccceEEEEeCCCC
Q 019157 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAEN----PGSVKSLTLLDTGIK 142 (345)
Q Consensus 92 ~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~----p~~v~~lvli~~~~~ 142 (345)
-.+-+..+++..+ .++.+.|||.||.+|..+|... .++|.+++..++++.
T Consensus 71 A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 71 ALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 3444555555555 4699999999999999999874 357889998888764
No 157
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.87 E-value=0.018 Score=56.22 Aligned_cols=83 Identities=13% Similarity=0.071 Sum_probs=58.9
Q ss_pred hhhccCceEEEeeCCCCCCCCCchhhhhhcccccccchhhhhhhhhhccccccchhhhhccCchhHHHHHHhhhhhcccc
Q 019157 4 SLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVK 83 (345)
Q Consensus 4 ~L~~~G~~vi~~Dl~G~G~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (345)
.++.+||.||..|.||.|.|+....+... .|
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~------------------------------------~E------------- 105 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESS------------------------------------RE------------- 105 (563)
T ss_pred eeecCceEEEEecccccccCCcccceecc------------------------------------cc-------------
Confidence 47788999999999999999874332110 00
Q ss_pred ccccChHHHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 84 VIELGSDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 84 ~~~~~~~~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
.+| .-++.+.+.+... .+|-.+|-|++|+..+.+|+..|-.++.++...+..
T Consensus 106 -----~~D-g~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 106 -----AED-GYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred -----ccc-hhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccc
Confidence 012 2233344444433 589999999999999999999988888888776653
No 158
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.84 E-value=0.011 Score=51.59 Aligned_cols=36 Identities=8% Similarity=-0.006 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHC
Q 019157 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAEN 127 (345)
Q Consensus 92 ~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 127 (345)
....+...++...-.++++.|||+||.+|..+|...
T Consensus 114 ~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 114 VLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 344444444444556899999999999999988753
No 159
>PLN02454 triacylglycerol lipase
Probab=95.71 E-value=0.028 Score=52.95 Aligned_cols=37 Identities=5% Similarity=0.113 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHcCCCc--EEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNLAP--VHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~--~~lvGhS~Gg~ia~~~A~~ 126 (345)
+++...|..+++...-.+ +++.|||+||.+|+..|..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 445566666666654443 9999999999999998854
No 160
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.60 E-value=0.017 Score=50.06 Aligned_cols=36 Identities=6% Similarity=0.107 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~ 125 (345)
+.+++.|.+.++.... .++++|||||||.++-.+..
T Consensus 60 ~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 60 ERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 4455555555554444 48999999999999876554
No 161
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.56 E-value=0.014 Score=57.03 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=31.3
Q ss_pred HHcCCCcEEEEEeCchHHHHHHHHHHC-----------C----CccceEEEEeCCC
Q 019157 101 DTFNLAPVHLVLHDSALPMSANWVAEN-----------P----GSVKSLTLLDTGI 141 (345)
Q Consensus 101 ~~l~~~~~~lvGhS~Gg~ia~~~A~~~-----------p----~~v~~lvli~~~~ 141 (345)
+.-+.+||+||||||||.+++.+...- + ..|+++|.++++.
T Consensus 208 ~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 208 ATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 333457999999999999999987632 1 1478999998874
No 162
>KOG3101 consensus Esterase D [General function prediction only]
Probab=95.28 E-value=0.0034 Score=52.98 Aligned_cols=51 Identities=18% Similarity=0.179 Sum_probs=38.8
Q ss_pred HHHHHHHHH----HcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC
Q 019157 93 GRVLGQVID----TFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (345)
Q Consensus 93 ~~~l~~ll~----~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~ 143 (345)
++.|-+++. .+...++-+.||||||.=|+..+.++|.+.+++-..+|...+
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 344444444 233357889999999999999999999999998888876544
No 163
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.26 E-value=0.037 Score=48.84 Aligned_cols=37 Identities=8% Similarity=0.037 Sum_probs=33.6
Q ss_pred CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 105 LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
-++-.|+|||+||.+++.....+|+.+...++++|..
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 3568899999999999999999999999999998864
No 164
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.24 E-value=1.1 Score=39.20 Aligned_cols=55 Identities=11% Similarity=0.142 Sum_probs=37.5
Q ss_pred CCCEEEEEecCCCCcch--HhHHHHHhhC--CC--CeEEEE-cCCccccc-cCHHHHHHHHHHHH
Q 019157 223 GIPMQILWSSVWSKEWS--EEGSRVADAL--PQ--AKFVGH-SGGRWPQV-DSADELAKHIADFV 279 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~--~~~~~~~~~~--~~--~~~~~i-~~GH~~~~-e~pe~v~~~I~~fl 279 (345)
.+|.++|.++ .|.++ +..++.++.. .+ .+.+.+ ++.|.-++ ++|++..+++.+|+
T Consensus 178 ~~p~lylYS~--~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSK--ADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCC--CCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4799999999 66555 3333333322 22 445555 78998775 57999999999884
No 165
>PLN02162 triacylglycerol lipase
Probab=95.11 E-value=0.057 Score=51.45 Aligned_cols=36 Identities=14% Similarity=0.042 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~ 125 (345)
.++.+.+.+++....-.++++.|||+||.+|+.+|.
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 345566666776666678999999999999999765
No 166
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.09 E-value=0.061 Score=49.70 Aligned_cols=57 Identities=19% Similarity=0.213 Sum_probs=39.8
Q ss_pred HHHHHHHHHH--HcCCCcEEEEEeCchHHHHHHHHHHCCC-----ccceEEEEeCCCCCCchhh
Q 019157 92 VGRVLGQVID--TFNLAPVHLVLHDSALPMSANWVAENPG-----SVKSLTLLDTGIKPALPLF 148 (345)
Q Consensus 92 ~~~~l~~ll~--~l~~~~~~lvGhS~Gg~ia~~~A~~~p~-----~v~~lvli~~~~~~~~~~~ 148 (345)
....|.+.+. ..|.+|+.|||||+|+-+.......-.+ .|..+++++++.......|
T Consensus 204 aG~~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W 267 (345)
T PF05277_consen 204 AGKVLADALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEW 267 (345)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHH
Confidence 3444444443 2466799999999999998876655444 3899999998876544444
No 167
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=95.07 E-value=0.012 Score=55.39 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=27.6
Q ss_pred cCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 103 FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
++.+++.++|||+||..++..+.+. .+++..|++|+..
T Consensus 225 lD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 225 LDLSRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWM 262 (379)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES---
T ss_pred cchhheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcc
Confidence 3456899999999999999888766 6799999999875
No 168
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.01 E-value=0.63 Score=40.77 Aligned_cols=35 Identities=14% Similarity=-0.111 Sum_probs=29.6
Q ss_pred cEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 107 PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
|+.-||||||+-+-+.+.+.++..-++-|+++-..
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 67889999999999999888876667888888764
No 169
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=94.88 E-value=0.053 Score=47.29 Aligned_cols=48 Identities=10% Similarity=0.135 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC-----ccceEEEEeCCC
Q 019157 94 RVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG-----SVKSLTLLDTGI 141 (345)
Q Consensus 94 ~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~-----~v~~lvli~~~~ 141 (345)
..+..+-++.++.++.+|||||||.-...|+..+.. .++++|.++.+.
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 334444456788999999999999999999987654 488999988764
No 170
>PLN00413 triacylglycerol lipase
Probab=94.76 E-value=0.087 Score=50.35 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHH
Q 019157 91 EVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 91 ~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~ 125 (345)
++.+.+..+++...-.++++.|||+||++|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45667777777776678999999999999999885
No 171
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=94.70 E-value=0.12 Score=43.07 Aligned_cols=54 Identities=13% Similarity=0.041 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHcC-----CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC
Q 019157 90 DEVGRVLGQVIDTFN-----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~-----~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~ 143 (345)
+.-+..|..+++.|. -..+.++|||+|+.++-..+...+..+..+|+++++...
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 445666666666543 236889999999999999888867789999999988644
No 172
>PLN02571 triacylglycerol lipase
Probab=94.55 E-value=0.073 Score=50.22 Aligned_cols=37 Identities=11% Similarity=0.269 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCC--cEEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~--~~~lvGhS~Gg~ia~~~A~~ 126 (345)
+++.++|..+++...-. ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 55677777777765432 68999999999999998864
No 173
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=94.45 E-value=0.28 Score=45.80 Aligned_cols=58 Identities=9% Similarity=0.078 Sum_probs=43.4
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHH--CCC---ccceEEEEeCCCCC
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE--NPG---SVKSLTLLDTGIKP 143 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~--~p~---~v~~lvli~~~~~~ 143 (345)
..-+.+.++....+++..|-+.++|+|=|.||.+++.+... .+. ..+++|+++|....
T Consensus 175 PtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 175 PTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred chHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 33445667777777777788999999999999999987653 211 35799999998643
No 174
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.44 E-value=0.075 Score=45.39 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=36.7
Q ss_pred cccChHHHHHHHHHHHHHcCC-CcEEEEEeCchHHHHHHHHHHC
Q 019157 85 IELGSDEVGRVLGQVIDTFNL-APVHLVLHDSALPMSANWVAEN 127 (345)
Q Consensus 85 ~~~~~~~~~~~l~~ll~~l~~-~~~~lvGhS~Gg~ia~~~A~~~ 127 (345)
+++...|+.+....+|++.+- +|++|+|||-|+.+..++..++
T Consensus 73 ~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 73 FDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 455667889999999998864 5999999999999999998875
No 175
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.43 E-value=0.063 Score=45.05 Aligned_cols=53 Identities=6% Similarity=0.033 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHH------CCCccceEEEEeCCC
Q 019157 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE------NPGSVKSLTLLDTGI 141 (345)
Q Consensus 89 ~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~------~p~~v~~lvli~~~~ 141 (345)
..++.+.|.+......-.+++|+|+|.|+.++..++.. ..++|.++|+++-+.
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 35566777777677666799999999999999999877 235789999988664
No 176
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.38 E-value=0.17 Score=49.46 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=30.3
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCC-CCeEEEE-cCCcccc
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALP-QAKFVGH-SGGRWPQ 264 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~-~~~~~~i-~~GH~~~ 264 (345)
+.|+|+|.|..|.++.....+.+..+.. ..+++++ +++|.+-
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMA 347 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCcccc
Confidence 4799999999555555566666666653 4578888 7899654
No 177
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.22 E-value=0.095 Score=48.15 Aligned_cols=55 Identities=13% Similarity=0.187 Sum_probs=40.4
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHH----C----CCccceEEEEeCC
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE----N----PGSVKSLTLLDTG 140 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~----~----p~~v~~lvli~~~ 140 (345)
.|+-..+...|..+.+..+.++++|++||||..+++....+ . +.+++-+|+.+|-
T Consensus 171 ~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 171 NYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred hhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 56667788888888777788999999999999999886643 1 2245566655543
No 178
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.16 E-value=0.056 Score=51.22 Aligned_cols=53 Identities=9% Similarity=-0.005 Sum_probs=39.2
Q ss_pred ChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC--------ccceEEEEeCC
Q 019157 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG--------SVKSLTLLDTG 140 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~--------~v~~lvli~~~ 140 (345)
.+..+..-|+...+.-|.+|++||+||||+.+.+.+...+++ .|++++-++++
T Consensus 164 yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 164 YLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 334444555555555566899999999999999999998887 36677777665
No 179
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=94.14 E-value=0.083 Score=48.77 Aligned_cols=49 Identities=16% Similarity=-0.005 Sum_probs=34.9
Q ss_pred CCCEEEEEecCCCCcch-HhHHHHHhhCCCC--eEEEE-cCCccccccCHHHH
Q 019157 223 GIPMQILWSSVWSKEWS-EEGSRVADALPQA--KFVGH-SGGRWPQVDSADEL 271 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~-~~~~~~~~~~~~~--~~~~i-~~GH~~~~e~pe~v 271 (345)
++|++++.|..|.-.+. .........+++. -+..+ ++.|+-+++-.++.
T Consensus 251 ~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 251 TDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 58999999994332233 5666777778877 34455 88999988877664
No 180
>COG4099 Predicted peptidase [General function prediction only]
Probab=94.07 E-value=0.1 Score=46.69 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=41.3
Q ss_pred HHHHHHH-HHHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 91 EVGRVLG-QVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 91 ~~~~~l~-~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
...+.+. .+.++.++ .++.++|.|+||+-++.++.++|+.+.+.++++...
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 4455555 34456666 479999999999999999999999999999998754
No 181
>PLN02310 triacylglycerol lipase
Probab=93.91 E-value=0.12 Score=48.60 Aligned_cols=37 Identities=8% Similarity=0.105 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcC----CCcEEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFN----LAPVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~----~~~~~lvGhS~Gg~ia~~~A~~ 126 (345)
+.+.+.+..+++... -.++++.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 345566666666542 1379999999999999998853
No 182
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.88 E-value=0.87 Score=45.19 Aligned_cols=55 Identities=2% Similarity=-0.153 Sum_probs=45.5
Q ss_pred cChHHHHHHHHHHHHHcC--CCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 87 LGSDEVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l~--~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
-|+.|+.+....+++.=- -+.+.++|-|.||++.-..+...|+.++++|+--|..
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCcc
Confidence 467889999888886421 2479999999999999999999999999999766653
No 183
>COG0627 Predicted esterase [General function prediction only]
Probab=93.80 E-value=0.091 Score=48.16 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=33.5
Q ss_pred cEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC
Q 019157 107 PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (345)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~ 143 (345)
.-.++||||||.=|+.+|.++|+++.++...++...+
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 6789999999999999999999999999988887644
No 184
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=93.50 E-value=0.17 Score=47.18 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 90 DEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
.|++..|..+-+.++. .||+.+|-|+||+++..+-.+||..|.+....+++
T Consensus 149 ADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 149 ADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 4555555555444433 58999999999999999999999988887766665
No 185
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.40 E-value=0.23 Score=44.48 Aligned_cols=52 Identities=8% Similarity=0.153 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCC--cEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~--~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
..+.+.+..++.+.+++ +|.+.|.|-||.++..+++.+|+.+.++.+++...
T Consensus 126 gflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 126 GFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 34566666677777876 89999999999999999999999999999888764
No 186
>PLN02408 phospholipase A1
Probab=93.34 E-value=0.14 Score=47.65 Aligned_cols=37 Identities=5% Similarity=0.162 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHcCCC--cEEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~--~~~lvGhS~Gg~ia~~~A~~ 126 (345)
+.+.+.|..+++...-. ++++.|||+||.+|+..|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 34556667777765533 58999999999999998865
No 187
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.23 E-value=0.056 Score=46.18 Aligned_cols=52 Identities=13% Similarity=0.128 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHcCC----CcEEEEEeCchHHHHHHHHH--HCCCccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTFNL----APVHLVLHDSALPMSANWVA--ENPGSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~----~~~~lvGhS~Gg~ia~~~A~--~~p~~v~~lvli~~~~ 141 (345)
.+=+++|..++++++. ..++|+|||.|+.=.+.|.. ..|..|+..|+.+|..
T Consensus 87 k~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 87 KDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred cccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 4457778888887754 37999999999988887773 3455788888888775
No 188
>PLN02753 triacylglycerol lipase
Probab=93.03 E-value=0.14 Score=49.56 Aligned_cols=36 Identities=3% Similarity=0.020 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHcCC-----CcEEEEEeCchHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNL-----APVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~-----~~~~lvGhS~Gg~ia~~~A~ 125 (345)
+.+...|..+++.... -++++.|||+||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4456666677765532 47999999999999999885
No 189
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=93.01 E-value=0.39 Score=44.03 Aligned_cols=50 Identities=16% Similarity=0.126 Sum_probs=39.7
Q ss_pred HHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC-ccceEEEEeCCCC
Q 019157 93 GRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG-SVKSLTLLDTGIK 142 (345)
Q Consensus 93 ~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~-~v~~lvli~~~~~ 142 (345)
.+.+.+++...+..+++||||+.|+..++.+....+. .+.++|+|++..+
T Consensus 180 i~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 180 IEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred HHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 3444455556676679999999999999999998875 5899999998643
No 190
>PLN02934 triacylglycerol lipase
Probab=92.67 E-value=0.19 Score=48.45 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~ 125 (345)
..+...+..+++...-.++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 346677777777776679999999999999999874
No 191
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=92.48 E-value=3.7 Score=36.88 Aligned_cols=55 Identities=16% Similarity=0.154 Sum_probs=43.5
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCchH-----HHHHHHHHHCCCccceEEEEeCCC
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSAL-----PMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg-----~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
.+.++++++-+.+.+..+|.+ +++++-+-=+ .++++-+...|...++++++++++
T Consensus 150 ~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 150 HFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred CccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 567899999999999999965 7888887654 444555556777889999999885
No 192
>PLN02719 triacylglycerol lipase
Probab=92.40 E-value=0.19 Score=48.44 Aligned_cols=37 Identities=5% Similarity=0.100 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHcCC-----CcEEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNL-----APVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~-----~~~~lvGhS~Gg~ia~~~A~~ 126 (345)
+++...|..+++...- .++++.|||+||.+|+..|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 4455666666665532 379999999999999998853
No 193
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.39 E-value=0.24 Score=46.16 Aligned_cols=40 Identities=13% Similarity=0.074 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHH----cCCCcEEEEEeCchHHHHHHHHHHCCC
Q 019157 90 DEVGRVLGQVIDT----FNLAPVHLVLHDSALPMSANWVAENPG 129 (345)
Q Consensus 90 ~~~~~~l~~ll~~----l~~~~~~lvGhS~Gg~ia~~~A~~~p~ 129 (345)
+.+++|+..+++. -+..++.|+|+|+|+=+.-..-.+.|.
T Consensus 306 e~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 306 EQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 5677777777754 566899999999999876665555553
No 194
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.16 E-value=0.094 Score=52.64 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=25.3
Q ss_pred cEEEEEeCchHHHHHHHHHH---CCCccceEEEEeCC
Q 019157 107 PVHLVLHDSALPMSANWVAE---NPGSVKSLTLLDTG 140 (345)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~A~~---~p~~v~~lvli~~~ 140 (345)
.|+||||||||.+|...+.. .+..|.-++..+++
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 49999999999999887642 34456666666665
No 195
>PLN02761 lipase class 3 family protein
Probab=92.08 E-value=0.22 Score=48.14 Aligned_cols=36 Identities=6% Similarity=0.099 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcC------CCcEEEEEeCchHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFN------LAPVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~------~~~~~lvGhS~Gg~ia~~~A~ 125 (345)
+.+.+.|..+++..+ --++++.|||+||.+|+..|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 455666667776552 136999999999999998885
No 196
>COG3150 Predicted esterase [General function prediction only]
Probab=92.02 E-value=0.39 Score=39.32 Aligned_cols=54 Identities=4% Similarity=-0.037 Sum_probs=43.6
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
.-.+...++.+..++..++-....|||-|+||..|..++.++. + +-|+++|+..
T Consensus 39 ~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--i-rav~~NPav~ 92 (191)
T COG3150 39 PHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--I-RAVVFNPAVR 92 (191)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--C-hhhhcCCCcC
Confidence 4556788899999999888777889999999999999999876 3 3456677654
No 197
>PLN02324 triacylglycerol lipase
Probab=91.86 E-value=0.28 Score=46.36 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~ 126 (345)
+.+.+.|..+++...- -++++.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4455666677776543 268999999999999998854
No 198
>PLN02802 triacylglycerol lipase
Probab=91.51 E-value=0.32 Score=46.99 Aligned_cols=37 Identities=8% Similarity=0.136 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~ 126 (345)
+++.+.|..+++...- .++++.|||+||.+|+..|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 4566667777776543 268999999999999988864
No 199
>PLN03037 lipase class 3 family protein; Provisional
Probab=90.19 E-value=0.47 Score=45.96 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHcC----CCcEEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFN----LAPVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~----~~~~~lvGhS~Gg~ia~~~A~~ 126 (345)
+.+.++|..+++... -.++.|.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345566777776553 1369999999999999998853
No 200
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=90.07 E-value=0.41 Score=46.85 Aligned_cols=49 Identities=8% Similarity=-0.016 Sum_probs=35.7
Q ss_pred HHHHHHHHHHcCC--CcEEEEEeCchHHHHHHHHHH--CCCccceEEEEeCCC
Q 019157 93 GRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAE--NPGSVKSLTLLDTGI 141 (345)
Q Consensus 93 ~~~l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~A~~--~p~~v~~lvli~~~~ 141 (345)
.+.+.+-++..|. ++|.|+|+|.||..+..++.. .+..++++|++++..
T Consensus 161 l~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 161 LKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 3444444556665 589999999999998888765 234688999888764
No 201
>PLN02847 triacylglycerol lipase
Probab=89.64 E-value=0.62 Score=45.87 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=22.9
Q ss_pred HHHHHHHcCCCcEEEEEeCchHHHHHHHHHH
Q 019157 96 LGQVIDTFNLAPVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 96 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~ 126 (345)
|...+....--+++++|||+||.+|..++..
T Consensus 241 L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 241 LLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3334444444589999999999999998864
No 202
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=89.36 E-value=0.19 Score=45.21 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=29.7
Q ss_pred HHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 101 DTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 101 ~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
..+.-.++.++|||+||+.+....+.+. .++..|++|...
T Consensus 236 ~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM 275 (399)
T KOG3847|consen 236 GNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWM 275 (399)
T ss_pred cchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeee
Confidence 3344457889999999999888777655 477777777654
No 203
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=89.07 E-value=1 Score=42.43 Aligned_cols=36 Identities=6% Similarity=-0.154 Sum_probs=31.5
Q ss_pred cEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCC
Q 019157 107 PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (345)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~ 142 (345)
|++++|+|.||.+|...|.-.|-.|.+++=-++.+.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999998885555543
No 204
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=88.83 E-value=1.2 Score=42.75 Aligned_cols=55 Identities=15% Similarity=0.016 Sum_probs=45.9
Q ss_pred cChHHHHHHHHHHHHHcCC-------CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 87 LGSDEVGRVLGQVIDTFNL-------APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l~~-------~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
++.+....|+..+|+.++. .|++.+|-|+-|.+++.+-..+|+.|.+-|..+++.
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 4567778888888876653 289999999999999999999999999888777764
No 205
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=88.79 E-value=0.78 Score=42.61 Aligned_cols=37 Identities=8% Similarity=0.099 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHH
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE 126 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~ 126 (345)
..+.+++..+++...--++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677888888888876689999999999999988764
No 206
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.48 E-value=1.2 Score=38.04 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=36.2
Q ss_pred HHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC--ccceEEEEeCC
Q 019157 97 GQVIDTFNLAPVHLVLHDSALPMSANWVAENPG--SVKSLTLLDTG 140 (345)
Q Consensus 97 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvli~~~ 140 (345)
..++.-.....+.+|.||.||...+.+..++|+ +|.++.+.+++
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 444555556789999999999999999999996 68888888876
No 207
>PLN02633 palmitoyl protein thioesterase family protein
Probab=88.40 E-value=1.3 Score=40.24 Aligned_cols=35 Identities=11% Similarity=0.027 Sum_probs=32.2
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCC--ccceEEEEeCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPG--SVKSLTLLDTG 140 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvli~~~ 140 (345)
+-+++||+|-||.++-.++.+.|+ .|+.+|.++++
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 359999999999999999999998 59999999987
No 208
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=87.90 E-value=1.8 Score=39.94 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHc---CCCcEEEEEeCchHHHHHHHHHHC----------CCccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAEN----------PGSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l---~~~~~~lvGhS~Gg~ia~~~A~~~----------p~~v~~lvli~~~~ 141 (345)
+++...|..+++.. .-.+++|.|-|+||..+-.+|.+- +-.++++++-++..
T Consensus 32 ~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t 96 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 96 (319)
T ss_pred HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCC
Confidence 44555556666543 346899999999998777777532 12467888877764
No 209
>PLN02606 palmitoyl-protein thioesterase
Probab=87.41 E-value=1.5 Score=39.69 Aligned_cols=35 Identities=9% Similarity=0.008 Sum_probs=32.1
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCC--ccceEEEEeCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPG--SVKSLTLLDTG 140 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvli~~~ 140 (345)
+-+++||+|-||.++-.++.+.|+ .|+.+|.++++
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 359999999999999999999988 49999999987
No 210
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=87.03 E-value=6.3 Score=33.56 Aligned_cols=49 Identities=8% Similarity=0.091 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHH---cCC--CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 91 EVGRVLGQVIDT---FNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 91 ~~~~~l~~ll~~---l~~--~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
..++.+..+++. .|+ +++.+-|.||||.++++.+..+|..+.+++-..+
T Consensus 73 ~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 73 RAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 345555566553 343 5789999999999999999999877777765544
No 211
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=86.89 E-value=0.49 Score=42.55 Aligned_cols=35 Identities=9% Similarity=-0.146 Sum_probs=31.2
Q ss_pred cEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 107 PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
.-+|+|-|+||.+++..+..+|+++-.++..++..
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 45699999999999999999999999988877754
No 212
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=83.88 E-value=3.6 Score=36.88 Aligned_cols=50 Identities=8% Similarity=0.047 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHH---cCCCcEEEEEeCchHHHHHHHHHHCCC-ccceEEEEeCC
Q 019157 90 DEVGRVLGQVIDT---FNLAPVHLVLHDSALPMSANWVAENPG-SVKSLTLLDTG 140 (345)
Q Consensus 90 ~~~~~~l~~ll~~---l~~~~~~lvGhS~Gg~ia~~~A~~~p~-~v~~lvli~~~ 140 (345)
.+.++.+.+.+.. |. +-+++||+|-||.++-.++.+.|+ .|+.+|.++++
T Consensus 62 ~~Qv~~vc~~l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 62 NDQVEQVCEQLANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp HHHHHHHHHHHHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred HHHHHHHHHHHhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 3444444444443 22 469999999999999999999986 69999999987
No 213
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=83.57 E-value=2.7 Score=40.63 Aligned_cols=30 Identities=10% Similarity=0.217 Sum_probs=24.9
Q ss_pred CeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 252 AKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 252 ~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
..+..+ ++||++..++|+...+.+..|+.-
T Consensus 460 ~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 460 LTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred ceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 344445 999999999999999999998764
No 214
>PRK13263 ureE urease accessory protein UreE; Provisional
Probab=83.08 E-value=1.7 Score=37.04 Aligned_cols=9 Identities=0% Similarity=-0.112 Sum_probs=5.4
Q ss_pred CCEEEEEec
Q 019157 224 IPMQILWSS 232 (345)
Q Consensus 224 ~PvliI~G~ 232 (345)
.|++.|...
T Consensus 78 E~Vl~I~~~ 86 (206)
T PRK13263 78 EAVLRVRAG 86 (206)
T ss_pred CcEEEEECC
Confidence 466666654
No 215
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=80.86 E-value=7.3 Score=33.93 Aligned_cols=37 Identities=14% Similarity=0.057 Sum_probs=26.4
Q ss_pred CCcEEEEEeCchHHHHHHHHHHCCC------ccceEEEEeCCC
Q 019157 105 LAPVHLVLHDSALPMSANWVAENPG------SVKSLTLLDTGI 141 (345)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~A~~~p~------~v~~lvli~~~~ 141 (345)
-++++++|+|.|+.++..++.+.-. ....+|+++-+.
T Consensus 47 ~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 47 GGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPR 89 (225)
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCC
Confidence 4789999999999999987765421 233566666543
No 216
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.43 E-value=2.6 Score=34.75 Aligned_cols=36 Identities=14% Similarity=0.050 Sum_probs=32.5
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
...++-|-||||..++.+..++|+...++|.++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 567789999999999999999999999999888763
No 217
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=79.21 E-value=15 Score=39.63 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=39.3
Q ss_pred ChHHHHHHHHHHHHHcC-CCcEEEEEeCchHHHHHHHHHHCC--CccceEEEEeCCC
Q 019157 88 GSDEVGRVLGQVIDTFN-LAPVHLVLHDSALPMSANWVAENP--GSVKSLTLLDTGI 141 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l~-~~~~~lvGhS~Gg~ia~~~A~~~p--~~v~~lvli~~~~ 141 (345)
++++.++-...-++++. ..|..|+|+|+|+.++..+|.... +....+|+++...
T Consensus 2163 Sies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2163 SIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred hHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 34556666555555554 369999999999999999987543 3466799999764
No 218
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=78.56 E-value=10 Score=33.78 Aligned_cols=35 Identities=11% Similarity=-0.007 Sum_probs=30.8
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCC-ccceEEEEeCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPG-SVKSLTLLDTG 140 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~-~v~~lvli~~~ 140 (345)
+-+++||.|-||.++-.++...++ .|..+|.++++
T Consensus 92 qGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 458999999999999999998776 58999988877
No 219
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=77.80 E-value=7.5 Score=35.78 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=25.0
Q ss_pred CeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 252 AKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 252 ~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
..++++ ++||+++ .+|+...+.|..|+..
T Consensus 287 ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~ 316 (319)
T PLN02213 287 MTFATIKAGGHTAE-YRPNETFIMFQRWISG 316 (319)
T ss_pred ceEEEEcCCCCCCC-cCHHHHHHHHHHHHcC
Confidence 566777 8999997 5999999999999975
No 220
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=76.67 E-value=6.7 Score=34.66 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=40.2
Q ss_pred ccCCCCEEEEEecCCCCcchHhHHHHHhhCCC--CeEEEE-cCCccccccCHH---HHHHHHHHHHHc
Q 019157 220 GIKGIPMQILWSSVWSKEWSEEGSRVADALPQ--AKFVGH-SGGRWPQVDSAD---ELAKHIADFVSS 281 (345)
Q Consensus 220 ~~~~~PvliI~G~~D~D~~~~~~~~~~~~~~~--~~~~~i-~~GH~~~~e~pe---~v~~~I~~fl~~ 281 (345)
.+..+|+++++|..|.-.+...+..+.+.... .+..++ +++|......+. +....+.+|+.+
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 33337999999984444444666666665554 355566 889987764433 667777777765
No 221
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=76.23 E-value=5.3 Score=35.74 Aligned_cols=48 Identities=13% Similarity=0.064 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
.+..+.+..+.+...-.++.|-|||+||.+|..+..++. +-.+.+-+|
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 345556666666666578999999999999999887764 333444444
No 222
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=76.23 E-value=5.3 Score=35.74 Aligned_cols=48 Identities=13% Similarity=0.064 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
.+..+.+..+.+...-.++.|-|||+||.+|..+..++. +-.+.+-+|
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 345556666666666578999999999999999887764 333444444
No 223
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.22 E-value=7.6 Score=37.66 Aligned_cols=56 Identities=18% Similarity=0.291 Sum_probs=38.2
Q ss_pred HHHHHHHH--HHcCCCcEEEEEeCchHHHHHHHHHH-----CCCccceEEEEeCCCCCCchhh
Q 019157 93 GRVLGQVI--DTFNLAPVHLVLHDSALPMSANWVAE-----NPGSVKSLTLLDTGIKPALPLF 148 (345)
Q Consensus 93 ~~~l~~ll--~~l~~~~~~lvGhS~Gg~ia~~~A~~-----~p~~v~~lvli~~~~~~~~~~~ 148 (345)
.+.+.+.+ ..+|.+|+.|||.|+|+-+....... .-..|..+++++++.+.....|
T Consensus 432 G~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w 494 (633)
T KOG2385|consen 432 GELLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLW 494 (633)
T ss_pred HHHHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHH
Confidence 33444443 34577899999999999988865542 2246889999998875544434
No 224
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.81 E-value=8.8 Score=31.38 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=28.9
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCCCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~~~ 143 (345)
+.+-||++|||-.+|-++....+ .++.+.++....+
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTgLp 92 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTGLP 92 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCCCC
Confidence 45779999999999999887754 7788888877544
No 225
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=75.24 E-value=8.8 Score=32.75 Aligned_cols=51 Identities=8% Similarity=0.005 Sum_probs=39.4
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeCc----hHHHHHHHHHHCCC-ccceEEEE
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDS----ALPMSANWVAENPG-SVKSLTLL 137 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~----Gg~ia~~~A~~~p~-~v~~lvli 137 (345)
.|+.+.+++.+.++++..+ ..++|+|+|. |..++.++|.+.-- .+..++-+
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 4556889999999998877 5799999999 88999999987532 45555544
No 226
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.16 E-value=7.8 Score=38.30 Aligned_cols=35 Identities=11% Similarity=0.278 Sum_probs=25.4
Q ss_pred CcEEEEEeCchHHHHHHHHH-----HCCC------ccceEEEEeCC
Q 019157 106 APVHLVLHDSALPMSANWVA-----ENPG------SVKSLTLLDTG 140 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~-----~~p~------~v~~lvli~~~ 140 (345)
.|++.|||||||.++=.+.. ..|+ ..+++|+++.+
T Consensus 526 RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 526 RPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred CceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 58999999999988765443 2343 35678888766
No 227
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=74.95 E-value=5.9 Score=38.15 Aligned_cols=51 Identities=16% Similarity=0.111 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHc---CCCcEEEEEeCchHHHHHHHHHH----C------CCccceEEEEeCCC
Q 019157 91 EVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAE----N------PGSVKSLTLLDTGI 141 (345)
Q Consensus 91 ~~~~~l~~ll~~l---~~~~~~lvGhS~Gg~ia~~~A~~----~------p~~v~~lvli~~~~ 141 (345)
++...|..+++.. .-.+++|+|.|+||..+..+|.+ + +-.++++++-++..
T Consensus 147 ~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 147 RTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 4555556665433 33689999999999877776653 2 12567888888764
No 228
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=72.20 E-value=7.9 Score=37.98 Aligned_cols=57 Identities=16% Similarity=0.068 Sum_probs=38.8
Q ss_pred ccChHHHHHHHHHH---HHHcCC--CcEEEEEeCchHHHHHHHHHHC--CCccceEEEEeCCCC
Q 019157 86 ELGSDEVGRVLGQV---IDTFNL--APVHLVLHDSALPMSANWVAEN--PGSVKSLTLLDTGIK 142 (345)
Q Consensus 86 ~~~~~~~~~~l~~l---l~~l~~--~~~~lvGhS~Gg~ia~~~A~~~--p~~v~~lvli~~~~~ 142 (345)
.+++.|....|.-+ |..+|. ++|.|+|+|.||..+..+...- ...++++|+.++...
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 45556666655444 445665 4799999999998887766542 247999999998643
No 229
>PLN02209 serine carboxypeptidase
Probab=72.15 E-value=12 Score=36.13 Aligned_cols=29 Identities=17% Similarity=0.268 Sum_probs=24.9
Q ss_pred CeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 252 AKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 252 ~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
..++.+ ++||+++ .+|++..+.+.+|+..
T Consensus 405 Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~ 434 (437)
T PLN02209 405 MTFATVKGGGHTAE-YLPEESSIMFQRWISG 434 (437)
T ss_pred eEEEEEcCCCCCcC-cCHHHHHHHHHHHHcC
Confidence 556677 8999996 5999999999999964
No 230
>PLN02209 serine carboxypeptidase
Probab=71.10 E-value=11 Score=36.48 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcC---CCcEEEEEeCchHHHHHHHHHH----C------CCccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAE----N------PGSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~---~~~~~lvGhS~Gg~ia~~~A~~----~------p~~v~~lvli~~~~ 141 (345)
+++.+.|..+++... -.+++|.|.|+||..+..+|.. + +-.++++++.++..
T Consensus 148 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 148 KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 445555555555432 3589999999999877666643 2 12467888888764
No 231
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=67.97 E-value=17 Score=35.04 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=24.8
Q ss_pred CeEEEE-cCCccccccCHHHHHHHHHHHHHc
Q 019157 252 AKFVGH-SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 252 ~~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
..++++ ++||+++ .+|++..+.|..|+..
T Consensus 401 ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~ 430 (433)
T PLN03016 401 MTFATIKAGGHTAE-YRPNETFIMFQRWISG 430 (433)
T ss_pred eEEEEEcCCCCCCC-CCHHHHHHHHHHHHcC
Confidence 456677 8999996 5999999999999965
No 232
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=66.69 E-value=47 Score=31.11 Aligned_cols=56 Identities=14% Similarity=0.086 Sum_probs=39.8
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE--cCCccccccCHHHHHHHHHHHHHc
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH--SGGRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i--~~GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
.+|..||.+.+|.-.+.+.+....+.+|+.+...+ +..|..- +..+...|..|+..
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~flnr 386 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLNR 386 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHHH
Confidence 58999999997554555888999999999876655 6788654 33445555555554
No 233
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=66.54 E-value=24 Score=26.43 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=36.0
Q ss_pred HHHHHHHHHHcCCCcEEEEEeCchH--HHHHHHHHHCCCccceEEE
Q 019157 93 GRVLGQVIDTFNLAPVHLVLHDSAL--PMSANWVAENPGSVKSLTL 136 (345)
Q Consensus 93 ~~~l~~ll~~l~~~~~~lvGhS~Gg--~ia~~~A~~~p~~v~~lvl 136 (345)
...|..+++.+.-.+++|||=|-=. -+-..+|.++|++|.++.+
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 5667888888888899999988665 5566788999999988864
No 234
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=63.68 E-value=9 Score=34.57 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=24.1
Q ss_pred HHHHHHHcCCCcEEEEEeCchHHHHHHHHH
Q 019157 96 LGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 96 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~ 125 (345)
+.+++..+|+.|-.++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 345567889999999999999988876653
No 235
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=62.96 E-value=6.2 Score=36.22 Aligned_cols=30 Identities=10% Similarity=0.171 Sum_probs=24.2
Q ss_pred HHHHHHHHcCCCcEEEEEeCchHHHHHHHH
Q 019157 95 VLGQVIDTFNLAPVHLVLHDSALPMSANWV 124 (345)
Q Consensus 95 ~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A 124 (345)
.+.++++..|+.|-.++|||+|=..|+.+|
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHC
Confidence 345667888999999999999988777655
No 236
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=62.54 E-value=14 Score=36.11 Aligned_cols=52 Identities=12% Similarity=0.008 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHc---CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l---~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~~ 141 (345)
.+++..-.++++.+ ..+.-...|-|-||--++..|.+||+-..++|.-+|..
T Consensus 96 h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 96 HETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 34444445555543 23567799999999999999999999999999998873
No 237
>PRK13262 ureE urease accessory protein UreE; Provisional
Probab=62.53 E-value=4.4 Score=35.22 Aligned_cols=10 Identities=40% Similarity=0.890 Sum_probs=4.5
Q ss_pred CCCCcccccc
Q 019157 321 HDNHEGHAHA 330 (345)
Q Consensus 321 ~~~~~~~~~~ 330 (345)
+.++|.|.|+
T Consensus 214 h~~~h~h~h~ 223 (231)
T PRK13262 214 HDHDHSHSHG 223 (231)
T ss_pred CCccCcCccc
Confidence 3344444444
No 238
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=62.53 E-value=10 Score=34.71 Aligned_cols=33 Identities=6% Similarity=-0.028 Sum_probs=26.6
Q ss_pred HHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCC
Q 019157 96 LGQVIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 96 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
+.+.++..|+..-.++|.|+|+.++..+|+.++
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344556668888889999999999999998753
No 239
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=62.34 E-value=1.6e+02 Score=28.85 Aligned_cols=49 Identities=8% Similarity=-0.018 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHcCCC--cEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 90 DEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~--~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
+.+.+.|.+-++.||.+ .++|-|-|||..-|+.+++... ..++|+--|.
T Consensus 339 ~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL 389 (511)
T TIGR03712 339 QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPL 389 (511)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcc
Confidence 45566667777888874 7999999999999999998642 3455554443
No 240
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=61.32 E-value=11 Score=34.14 Aligned_cols=30 Identities=7% Similarity=-0.156 Sum_probs=24.2
Q ss_pred HHHHHHHcCCCcEEEEEeCchHHHHHHHHH
Q 019157 96 LGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 96 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~ 125 (345)
+..+++..|+.|..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 445567788999999999999988887653
No 241
>PRK10279 hypothetical protein; Provisional
Probab=59.89 E-value=12 Score=34.22 Aligned_cols=32 Identities=3% Similarity=-0.041 Sum_probs=26.2
Q ss_pred HHHHHHcCCCcEEEEEeCchHHHHHHHHHHCC
Q 019157 97 GQVIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 97 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
.+.++..++.+-.++|.|+|+.++..||+...
T Consensus 24 L~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 24 INALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 34445678888899999999999999997654
No 242
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=57.66 E-value=16 Score=30.97 Aligned_cols=61 Identities=15% Similarity=0.261 Sum_probs=43.7
Q ss_pred cccCCCCEEEEEecCCCCcch-----HhHHHHHhhCCCC-eE-EEE-cCCccccccC---HHHHHHHHHHHHHc
Q 019157 219 EGIKGIPMQILWSSVWSKEWS-----EEGSRVADALPQA-KF-VGH-SGGRWPQVDS---ADELAKHIADFVSS 281 (345)
Q Consensus 219 ~~~~~~PvliI~G~~D~D~~~-----~~~~~~~~~~~~~-~~-~~i-~~GH~~~~e~---pe~v~~~I~~fl~~ 281 (345)
..+++++.+-|-|+ .|.+. ..+..+...+|.. +. ++. ++||+-.+.- .+++.-.|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe--~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGE--RDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecC--cccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 45567788999999 56555 5677887888754 33 334 7899866653 47888999999864
No 243
>PF07217 Het-C: Heterokaryon incompatibility protein Het-C; InterPro: IPR010816 In filamentous fungi, het loci (for heterokaryon incompatibility) are believed to regulate self/nonself-recognition during vegetative growth. As filamentous fungi grow, hyphal fusion occurs within an individual colony to form a network. Hyphal fusion can occur also between different individuals to form a heterokaryon, in which genetically distinct nuclei occupy a common cytoplasm. However, heterokaryotic cells are viable only if the individuals involved have identical alleles at all het loci [].
Probab=57.22 E-value=22 Score=35.23 Aligned_cols=69 Identities=14% Similarity=0.227 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHcCCccccccCCCCchhHHHHHHhhhhcCCCCCCCC-C--CCCCCCCCcccccccccchhccCCCCCC
Q 019157 268 ADELAKHIADFVSSLPKTVRQVEEEPIPEHIQKMFDEASSSGHNHDHH-H--SHSGHDNHEGHAHAAGYMDAYGLGHTWG 344 (345)
Q Consensus 268 pe~v~~~I~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (345)
...+.+.+.+|+...+.. ..+-.+++.+++..+|.+|-.+ + +|++++.+..+ +.......++.|+.|.
T Consensus 531 qr~Mf~~V~~W~~~~~~~--------~~~l~~~LS~EsVr~gkNh~~g~~d~ghg~g~~~~~~-~~~~~g~g~~~~~~~~ 601 (606)
T PF07217_consen 531 QREMFETVEEWWNEMSDR--------ERDLRRRLSKESVRNGKNHKEGVHDTGHGHGGPGGMG-KRFQGGHGKQAGSLWS 601 (606)
T ss_pred HHHHHHHHHHHHHhCChh--------hHHHHHHhhHHHHhCCCCCCCCCCCCCCCCCCcCccC-CCCCCCCCCCCCchHH
Confidence 356778888888875432 1125677888999888888333 2 33333322222 1122244466677775
Q ss_pred C
Q 019157 345 Q 345 (345)
Q Consensus 345 ~ 345 (345)
|
T Consensus 602 q 602 (606)
T PF07217_consen 602 Q 602 (606)
T ss_pred H
Confidence 4
No 244
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=56.72 E-value=16 Score=30.13 Aligned_cols=34 Identities=6% Similarity=-0.142 Sum_probs=26.0
Q ss_pred HHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCC
Q 019157 94 RVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 94 ~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
-.+.++ +..++..-.++|-|+|+.++..+|...+
T Consensus 15 Gvl~aL-~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKAL-RERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHH-HHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334444 4457788889999999999999998654
No 245
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=56.64 E-value=13 Score=33.25 Aligned_cols=30 Identities=13% Similarity=-0.078 Sum_probs=23.4
Q ss_pred HHHHHHHcC-CCcEEEEEeCchHHHHHHHHH
Q 019157 96 LGQVIDTFN-LAPVHLVLHDSALPMSANWVA 125 (345)
Q Consensus 96 l~~ll~~l~-~~~~~lvGhS~Gg~ia~~~A~ 125 (345)
+..++...+ +.|..++|||+|=..|+.+|.
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 344556677 899999999999988877764
No 246
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=56.38 E-value=15 Score=32.90 Aligned_cols=31 Identities=6% Similarity=-0.070 Sum_probs=25.5
Q ss_pred HHHHHHcCCCcEEEEEeCchHHHHHHHHHHC
Q 019157 97 GQVIDTFNLAPVHLVLHDSALPMSANWVAEN 127 (345)
Q Consensus 97 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 127 (345)
.+.+++.++..-.++|.|+|+.++..+|...
T Consensus 29 L~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 29 LQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 3444667888788999999999999999864
No 247
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=55.27 E-value=17 Score=30.47 Aligned_cols=28 Identities=4% Similarity=-0.059 Sum_probs=23.1
Q ss_pred HHHcCCCcEEEEEeCchHHHHHHHHHHC
Q 019157 100 IDTFNLAPVHLVLHDSALPMSANWVAEN 127 (345)
Q Consensus 100 l~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 127 (345)
++..++.+-.++|-|.|+.++..+|...
T Consensus 21 L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 21 LEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3455777788999999999999999754
No 248
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=53.86 E-value=16 Score=33.26 Aligned_cols=32 Identities=6% Similarity=-0.020 Sum_probs=26.8
Q ss_pred HHHHHHcCCCcEEEEEeCchHHHHHHHHHHCC
Q 019157 97 GQVIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 97 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
.+.|+..++.+-.+.|-|+|+.++..+|....
T Consensus 30 l~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 30 LKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 45556778999999999999999999998543
No 249
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=52.90 E-value=21 Score=30.95 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=25.0
Q ss_pred HHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCC
Q 019157 95 VLGQVIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 95 ~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
.+.++ +..++.+-.++|-|.|+.++..+|...+
T Consensus 18 vL~aL-~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 18 FLAAL-LEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHH-HHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 33333 4457777889999999999999997543
No 250
>COG0218 Predicted GTPase [General function prediction only]
Probab=52.89 E-value=25 Score=29.85 Aligned_cols=16 Identities=38% Similarity=0.781 Sum_probs=13.5
Q ss_pred EEEeeCCCCCCCCCch
Q 019157 12 VIAVDLPGNGFSDRSR 27 (345)
Q Consensus 12 vi~~Dl~G~G~S~~~~ 27 (345)
++.+|+||||+...|.
T Consensus 72 ~~lVDlPGYGyAkv~k 87 (200)
T COG0218 72 LRLVDLPGYGYAKVPK 87 (200)
T ss_pred EEEEeCCCcccccCCH
Confidence 7789999999987753
No 251
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=52.83 E-value=20 Score=35.89 Aligned_cols=53 Identities=4% Similarity=-0.054 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHHHc--CCCcEEEEEeCchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 88 GSDEVGRVLGQVIDTF--NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 88 ~~~~~~~~l~~ll~~l--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
+++++.....-+++.- ...+..+.|.|-||.++..++..+|+.+.++|+=-|.
T Consensus 529 ~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 529 SFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred cHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 4577777777777531 2357889999999999999999999999888865544
No 252
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=49.75 E-value=27 Score=33.83 Aligned_cols=31 Identities=16% Similarity=0.291 Sum_probs=26.7
Q ss_pred eEEEE-cCCccccccCHHHHHHHHHHHHHcCC
Q 019157 253 KFVGH-SGGRWPQVDSADELAKHIADFVSSLP 283 (345)
Q Consensus 253 ~~~~i-~~GH~~~~e~pe~v~~~I~~fl~~~~ 283 (345)
.++.+ ++||++..++|+.-...+..|+...+
T Consensus 418 tf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~ 449 (454)
T KOG1282|consen 418 TFATVRGAGHMVPYDKPESALIMFQRFLNGQP 449 (454)
T ss_pred EEEEEeCCcccCCCCCcHHHHHHHHHHHcCCC
Confidence 34667 99999999999999999999998643
No 253
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=48.49 E-value=30 Score=31.73 Aligned_cols=55 Identities=18% Similarity=0.268 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHc-------CCCcEEEEEeCchHHHHHHHHHHCCC---------ccceEEEEeCCCCC
Q 019157 89 SDEVGRVLGQVIDTF-------NLAPVHLVLHDSALPMSANWVAENPG---------SVKSLTLLDTGIKP 143 (345)
Q Consensus 89 ~~~~~~~l~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~A~~~p~---------~v~~lvli~~~~~~ 143 (345)
.++++.|+..+++.+ .-.|++|+--|+||-++..++...-+ ...+++|-++.+.+
T Consensus 98 ~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 98 NKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 467888888888753 33689999999999999988865332 35677777777544
No 254
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=47.78 E-value=25 Score=30.19 Aligned_cols=31 Identities=10% Similarity=0.059 Sum_probs=25.1
Q ss_pred HHHHHcCCCcEEEEEeCchHHHHHHHHHHCC
Q 019157 98 QVIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 98 ~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
+.+.+.++..-.++|.|.|+.+++.+|...+
T Consensus 18 ~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 18 KALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3344567777789999999999999998765
No 255
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=46.26 E-value=33 Score=29.09 Aligned_cols=47 Identities=21% Similarity=0.207 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC--ccceEEEE
Q 019157 91 EVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG--SVKSLTLL 137 (345)
Q Consensus 91 ~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvli 137 (345)
+..+.+..+++......++||--+..+.-.+..+..+-+ .+.++|+.
T Consensus 100 ~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 100 ELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred HHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 356666677776666677777766666666654444322 46788864
No 256
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=45.88 E-value=14 Score=32.84 Aligned_cols=10 Identities=30% Similarity=0.288 Sum_probs=5.5
Q ss_pred CCCCeEEEE-c
Q 019157 249 LPQAKFVGH-S 258 (345)
Q Consensus 249 ~~~~~~~~i-~ 258 (345)
+.++++++. +
T Consensus 73 lq~Adlv~WvG 83 (318)
T COG4531 73 LQSADLVVWVG 83 (318)
T ss_pred hhcCCEEEEEC
Confidence 345666655 5
No 257
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=44.02 E-value=35 Score=28.13 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCC
Q 019157 95 VLGQVIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 95 ~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
.+..+ +..++..-.++|-|.|+.++..+|...+
T Consensus 18 vl~~L-~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 18 VLRAL-EEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHH-HHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 34333 4557777789999999999999997654
No 258
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=41.63 E-value=3e+02 Score=25.75 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=50.9
Q ss_pred CCEEEEEecCCCCcch--HhHHHHHh----hCCCCeEEEE-cCCcccccc-CHHHHHHHHHHHHHcCCcccc--------
Q 019157 224 IPMQILWSSVWSKEWS--EEGSRVAD----ALPQAKFVGH-SGGRWPQVD-SADELAKHIADFVSSLPKTVR-------- 287 (345)
Q Consensus 224 ~PvliI~G~~D~D~~~--~~~~~~~~----~~~~~~~~~i-~~GH~~~~e-~pe~v~~~I~~fl~~~~~~~~-------- 287 (345)
.+.+.+.+. .|.++ +..+++.. ..-+.+.+-+ ++-|..+.. .|....+...+|+++......
T Consensus 226 ~~~ly~~s~--~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~~~~~~~~~~ 303 (350)
T KOG2521|consen 226 WNQLYLYSD--NDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSYNLKNRILGI 303 (350)
T ss_pred ccceeecCC--ccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccccCCccCccce
Confidence 567777777 55555 44444422 2233344445 788987654 699999999999987543211
Q ss_pred -cc--CCCCchhHHHHHHhhhhc
Q 019157 288 -QV--EEEPIPEHIQKMFDEASS 307 (345)
Q Consensus 288 -~~--~~~~~~~~~~~~~~~~~~ 307 (345)
.. ...++.+.+++++..+..
T Consensus 304 ~~~~~~~~~~~~~~~~~~~v~~~ 326 (350)
T KOG2521|consen 304 RADSAGDDPLTEKICSLFQVTLN 326 (350)
T ss_pred eecCCCCchHHHHHHHHHHHHhc
Confidence 11 133456678888877765
No 259
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=41.38 E-value=31 Score=34.26 Aligned_cols=32 Identities=16% Similarity=0.085 Sum_probs=26.0
Q ss_pred HHHHH-HHcCCCcEEEEEeCchHHHHHHHHHHC
Q 019157 96 LGQVI-DTFNLAPVHLVLHDSALPMSANWVAEN 127 (345)
Q Consensus 96 l~~ll-~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 127 (345)
+.+++ +..|+.|-.++|||+|=..++..|--.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 44556 578999999999999999888877544
No 260
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=40.96 E-value=40 Score=30.91 Aligned_cols=34 Identities=3% Similarity=-0.063 Sum_probs=22.7
Q ss_pred HHHHHHHHHcCCC----cEEEEEeCchHHHHHHHHHHC
Q 019157 94 RVLGQVIDTFNLA----PVHLVLHDSALPMSANWVAEN 127 (345)
Q Consensus 94 ~~l~~ll~~l~~~----~~~lvGhS~Gg~ia~~~A~~~ 127 (345)
..|.++-+.++.. -=.++|.|+||.||..+|..+
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 3444444445642 124999999999999999744
No 261
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=40.72 E-value=17 Score=34.87 Aligned_cols=32 Identities=13% Similarity=0.023 Sum_probs=25.6
Q ss_pred HHcCCCcEEEEEeCchHHHHHHHHHHCCCccc
Q 019157 101 DTFNLAPVHLVLHDSALPMSANWVAENPGSVK 132 (345)
Q Consensus 101 ~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~ 132 (345)
...++.+-+++|-|.|+.+|..+|...++.+.
T Consensus 96 ~E~gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 96 FEANLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 34467777899999999999999987666543
No 262
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=40.11 E-value=44 Score=27.41 Aligned_cols=27 Identities=7% Similarity=-0.043 Sum_probs=22.0
Q ss_pred HHcCCCcEEEEEeCchHHHHHHHHHHC
Q 019157 101 DTFNLAPVHLVLHDSALPMSANWVAEN 127 (345)
Q Consensus 101 ~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 127 (345)
+..++..-.++|-|.|+.++..++...
T Consensus 23 ~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 23 EEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 445666778999999999999999653
No 263
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=39.79 E-value=28 Score=33.74 Aligned_cols=52 Identities=13% Similarity=0.067 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHc---CCCcEEEEEeCchHHHHHHHHHH----C-----C-CccceEEEEeCCC
Q 019157 90 DEVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAE----N-----P-GSVKSLTLLDTGI 141 (345)
Q Consensus 90 ~~~~~~l~~ll~~l---~~~~~~lvGhS~Gg~ia~~~A~~----~-----p-~~v~~lvli~~~~ 141 (345)
++.-..|..++++. .-+++.|.|-|++|..+-.+|.+ + | -.++++++-++..
T Consensus 149 ~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 149 KDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred HHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 34444445555433 33789999999999777776653 2 1 2467777777664
No 264
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=39.44 E-value=14 Score=34.90 Aligned_cols=33 Identities=6% Similarity=0.140 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHH
Q 019157 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWV 124 (345)
Q Consensus 92 ~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A 124 (345)
+++.+.+.+....++++..||||+||.++..+.
T Consensus 136 la~~~~e~~~~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 136 LAEEVKETLYDYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cHHHHhhhhhccccceeeeeeeecCCeeeeEEE
Confidence 444455555555578999999999999876544
No 265
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=39.15 E-value=1.5e+02 Score=29.72 Aligned_cols=50 Identities=8% Similarity=0.009 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHcCC---CcEEEEEeCchHHHHHHHHHHCCCccceEEEEeC
Q 019157 89 SDEVGRVLGQVIDTFNL---APVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (345)
Q Consensus 89 ~~~~~~~l~~ll~~l~~---~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli~~ 139 (345)
.+|+......++++ |+ +++-+-|-|=||.++-....++|+.+.++|+--|
T Consensus 481 fdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 481 FDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred hHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 36777777777654 44 4678999999999998888899998877775443
No 266
>PRK14974 cell division protein FtsY; Provisional
Probab=38.53 E-value=1e+02 Score=28.57 Aligned_cols=46 Identities=13% Similarity=-0.013 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCC--CccceEEEE
Q 019157 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENP--GSVKSLTLL 137 (345)
Q Consensus 92 ~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p--~~v~~lvli 137 (345)
+.+.+..+.+.+....+++|.-+.-|.-+...+..+. -.+.++|+.
T Consensus 240 lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 240 LMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 4555666666666666778877777766666665443 246777764
No 267
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=37.89 E-value=35 Score=33.18 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=27.1
Q ss_pred CcEEEEEeCchHHHHHHHHHHCCC---ccceEEEEeCC
Q 019157 106 APVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTG 140 (345)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvli~~~ 140 (345)
.+.+|+|-|+||.-+..+|..--+ ..+++|++.+.
T Consensus 198 ~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 198 SPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred CceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 489999999999999888875444 35677766665
No 268
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=37.41 E-value=19 Score=34.11 Aligned_cols=37 Identities=8% Similarity=-0.059 Sum_probs=28.5
Q ss_pred HHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceEE
Q 019157 99 VIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLT 135 (345)
Q Consensus 99 ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lv 135 (345)
.+...|+.|-++.|-|.|+.+|..+|...++.+..++
T Consensus 104 aL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 104 ALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3455678888899999999999999996655554443
No 269
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=36.23 E-value=70 Score=31.18 Aligned_cols=49 Identities=14% Similarity=0.091 Sum_probs=36.8
Q ss_pred HHHHHHHHHHcCCC--cEEEEEeCchHHHHHHHHHHCCC---ccceEEEEeCCCC
Q 019157 93 GRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTGIK 142 (345)
Q Consensus 93 ~~~l~~ll~~l~~~--~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvli~~~~~ 142 (345)
.+.+.+-|+++|.+ .|.|+|+|-|++.++.+.+- |. .+.++|+.++...
T Consensus 165 LkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 165 LKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 45556667788875 69999999999988876653 54 5788888887754
No 270
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.86 E-value=52 Score=29.15 Aligned_cols=36 Identities=11% Similarity=0.055 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCCC-cEEEEEeCchHHHHHHHHHHCCCc
Q 019157 94 RVLGQVIDTFNLA-PVHLVLHDSALPMSANWVAENPGS 130 (345)
Q Consensus 94 ~~l~~ll~~l~~~-~~~lvGhS~Gg~ia~~~A~~~p~~ 130 (345)
-.+.++ ...++. .=.++|.|.|+.++..+++..+.+
T Consensus 15 Gvl~al-~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 15 GVLDAF-LEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHH-HHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 334444 344555 557999999999999999876653
No 271
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=35.62 E-value=19 Score=34.35 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=28.9
Q ss_pred HHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCccceE
Q 019157 95 VLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSL 134 (345)
Q Consensus 95 ~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~l 134 (345)
.+.+++ ..++.+-+++|-|.|+.++..+|...++.+..+
T Consensus 85 VlkaL~-e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALL-DADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHH-hCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333443 446778889999999999999998766665544
No 272
>KOG1819 consensus FYVE finger-containing proteins [General function prediction only]
Probab=34.96 E-value=28 Score=33.53 Aligned_cols=15 Identities=47% Similarity=0.527 Sum_probs=9.6
Q ss_pred chhHHHHHHhhhhcC
Q 019157 294 IPEHIQKMFDEASSS 308 (345)
Q Consensus 294 ~~~~~~~~~~~~~~~ 308 (345)
..++.||-++.-+.+
T Consensus 553 seeh~qk~~~khrds 567 (990)
T KOG1819|consen 553 SEEHEQKKFDKHRDS 567 (990)
T ss_pred hHHHhhccccccccc
Confidence 356777777766654
No 273
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=33.56 E-value=1.2e+02 Score=29.25 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCC--ccceEEE
Q 019157 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG--SVKSLTL 136 (345)
Q Consensus 92 ~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~--~v~~lvl 136 (345)
+.+.+..+.+......++||--++-|.-+...|..+-+ .+.++|+
T Consensus 200 lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 200 LFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred HHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 45555555555555667777777766666655555432 3566665
No 274
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=33.19 E-value=27 Score=32.09 Aligned_cols=32 Identities=9% Similarity=0.010 Sum_probs=24.6
Q ss_pred HHcCCCcEEEEEeCchHHHHHHHHHHCCCccc
Q 019157 101 DTFNLAPVHLVLHDSALPMSANWVAENPGSVK 132 (345)
Q Consensus 101 ~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~ 132 (345)
...++.+-++.|-|.|+.+|..++...++.+.
T Consensus 91 ~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~ 122 (323)
T cd07231 91 VEHQLLPRVIAGSSVGSIVCAIIATRTDEELQ 122 (323)
T ss_pred HHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 34577788899999999999999885544443
No 275
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=33.01 E-value=2.6e+02 Score=25.10 Aligned_cols=45 Identities=4% Similarity=-0.029 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcCCCcEEEEE-eCchHHHHHHHHHHCC-CccceEEEE
Q 019157 93 GRVLGQVIDTFNLAPVHLVL-HDSALPMSANWVAENP-GSVKSLTLL 137 (345)
Q Consensus 93 ~~~l~~ll~~l~~~~~~lvG-hS~Gg~ia~~~A~~~p-~~v~~lvli 137 (345)
.+.+.++++......++||- -++++.-+...+.++. -.+.++|+.
T Consensus 173 l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 173 VEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred HHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 44444555544444455544 4677777777776643 357777764
No 276
>COG0646 MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]
Probab=32.41 E-value=83 Score=28.56 Aligned_cols=45 Identities=20% Similarity=0.204 Sum_probs=31.9
Q ss_pred CccccccCHHHHHHHHHHHHHcCCccccccC--CCCchhHHHHHHhhhh
Q 019157 260 GRWPQVDSADELAKHIADFVSSLPKTVRQVE--EEPIPEHIQKMFDEAS 306 (345)
Q Consensus 260 GH~~~~e~pe~v~~~I~~fl~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 306 (345)
+-....+.|+.+++.+..|.+.-.-+ -+- =...|+||+.|.+..+
T Consensus 264 ~~~~Y~~~p~~~a~~~~~f~~~g~vn--IvGGCCGTTPeHIraia~~v~ 310 (311)
T COG0646 264 ERAVYDLTPEYMAEALAEFAEEGGVN--IVGGCCGTTPEHIRAIAEAVK 310 (311)
T ss_pred CccccCCCHHHHHHHHHHHHHhCCce--eeccccCCCHHHHHHHHHHhc
Confidence 34556678999999999998864221 111 2468999999987654
No 277
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=31.92 E-value=78 Score=31.33 Aligned_cols=57 Identities=18% Similarity=0.075 Sum_probs=37.9
Q ss_pred cccChHHHHHHHHHH---HHHcCC--CcEEEEEeCchHHHHHHHHHH--CCCccceEEEEeCCC
Q 019157 85 IELGSDEVGRVLGQV---IDTFNL--APVHLVLHDSALPMSANWVAE--NPGSVKSLTLLDTGI 141 (345)
Q Consensus 85 ~~~~~~~~~~~l~~l---l~~l~~--~~~~lvGhS~Gg~ia~~~A~~--~p~~v~~lvli~~~~ 141 (345)
-.+++.|+...+.-+ |...|. ++|.|+|||.||..+..+... ....+.+.|.++...
T Consensus 169 gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 169 GNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 355556666655444 445554 579999999999998877642 114567777777664
No 278
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=30.83 E-value=1.2e+02 Score=30.30 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEe------CchHHHHHHHHHHCCCccceEEEEeCC
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLH------DSALPMSANWVAENPGSVKSLTLLDTG 140 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGh------S~Gg~ia~~~A~~~p~~v~~lvli~~~ 140 (345)
..+...|.+++.. .++|+++|| +.|+.+++..-+..-++ .+.++++|.
T Consensus 324 Rvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 324 RVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 4567777777766 579999999 78999999876665555 778888876
No 279
>PF05194 UreE_C: UreE urease accessory protein, C-terminal domain; InterPro: IPR007864 Urease and other nickel metalloenzymes are synthesised as precursors devoid of the metalloenzyme active site. These precursors then undergo a complex post-translational maturation process that requires a number of accessory proteins. Members of this group are nickel-binding proteins required for urease metallocentre assembly []. They are believed to function as metallochaperones to deliver nickel to urease apoprotein [, ]. It has been shown by yeast two-hybrid analysis that UreE forms a dimeric complex with UreG in Helicobacter pylori []. The UreDFG-apoenzyme complex has also been shown to exist [, ] and is believed to be, with the addition of UreE, the assembly system for active urease []. The complexes, rather than the individual proteins, presumably bind to UreB via UreE/H recognition sites. The structure of Klebsiella aerogenes UreE reveals a unique two-domain architecture.The N-terminal domain is structurally related to a heat shock protein, while the C-terminal domain shows homology to the Atx1 copper metallochaperone [, ]. Significantly, the metal-binding sites in UreE and Atx1 are distinct in location and types of residues despite the relationship between these proteins and the mechanism for UreE activation of urease is proposed to be different from the thiol ligand exchange mechanism used by the copper metallochaperones. The C-terminal domain of this protein is the metal-binding region, which can bind up to six Ni molecules per dimer. Most members of this group contain a histidine-rich C-terminal motif that is involved in, but not solely responsible for, binding nickel ions in K. aerogenes UreE []. However, internal ligands, not the histidine residues at the C terminus, are necessary for UreE to assist in urease activation in K. aerogenes [], even though the truncated protein lacking the His-rich region binds two nickel ions instead of six. In H. pylori and some other organisms, the terminal histidine-rich binding sites are absent, but the internal histidine sites are present, and the latter probably function as nickel donors. Deletion analysis shows that this domain alone is sufficient for metal-binding and activation of urease [].; GO: 0016151 nickel ion binding, 0006461 protein complex assembly, 0019627 urea metabolic process; PDB: 3NXZ_B 3TJA_B 3LA0_B 3TJ9_B 3NY0_A 3L9Z_A 3TJ8_A 1EAR_A 1EB0_A 1GMU_B ....
Probab=29.90 E-value=17 Score=26.32 Aligned_cols=8 Identities=0% Similarity=0.169 Sum_probs=4.4
Q ss_pred CEEEEEec
Q 019157 225 PMQILWSS 232 (345)
Q Consensus 225 PvliI~G~ 232 (345)
||++|...
T Consensus 3 ~vl~I~~~ 10 (87)
T PF05194_consen 3 EVLVIRPR 10 (87)
T ss_dssp EEEEEE-S
T ss_pred eEEEEeCC
Confidence 56666665
No 280
>COG4813 ThuA Trehalose utilization protein [Carbohydrate transport and metabolism]
Probab=29.07 E-value=81 Score=26.51 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=30.6
Q ss_pred ccCCCCEEEEEecCCCCcch-HhHHHHHhhC-CCCeEEEEcCCccc
Q 019157 220 GIKGIPMQILWSSVWSKEWS-EEGSRVADAL-PQAKFVGHSGGRWP 263 (345)
Q Consensus 220 ~~~~~PvliI~G~~D~D~~~-~~~~~~~~~~-~~~~~~~i~~GH~~ 263 (345)
.+.+.-+|+.||..|.+.+. +..++..++. .+.-++++-+||+.
T Consensus 60 rLa~tDVLiWWGH~~Hg~V~D~iVeRV~kRV~EGMGLiVLHSGHfS 105 (261)
T COG4813 60 RLAKTDVLIWWGHKDHGAVEDEIVERVQKRVWEGMGLIVLHSGHFS 105 (261)
T ss_pred hhhccceEEEeccccccccchHHHHHHHHHHhcccceEEEeccchh
Confidence 34456899999997777766 5555655554 45567777888863
No 281
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=28.82 E-value=2e+02 Score=27.79 Aligned_cols=18 Identities=28% Similarity=0.422 Sum_probs=13.6
Q ss_pred hccCceEEEeeCCCCCCC
Q 019157 6 RSKKFNVIAVDLPGNGFS 23 (345)
Q Consensus 6 ~~~G~~vi~~Dl~G~G~S 23 (345)
...+|.+|.+|-+|....
T Consensus 179 ~~~~~DvVIIDTaGr~~~ 196 (428)
T TIGR00959 179 KENGFDVVIVDTAGRLQI 196 (428)
T ss_pred HhcCCCEEEEeCCCcccc
Confidence 345689999999997643
No 282
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=28.49 E-value=81 Score=27.47 Aligned_cols=33 Identities=15% Similarity=0.024 Sum_probs=23.9
Q ss_pred HHHHHHHHcCCC--cEEEEEeCchHHHHHHHHHHCC
Q 019157 95 VLGQVIDTFNLA--PVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 95 ~l~~ll~~l~~~--~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
.+..++ ..++. .-.++|-|.|+.++..++...+
T Consensus 17 Vl~~L~-e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLI-EAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHH-HcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 344444 45665 3479999999999999998654
No 283
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=28.36 E-value=60 Score=30.97 Aligned_cols=55 Identities=7% Similarity=-0.032 Sum_probs=44.3
Q ss_pred ccChHHHHHHHHHHHHHcC---CCcEEEEEeCchHHHHHHHHHHCCCccceEE-EEeCC
Q 019157 86 ELGSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAENPGSVKSLT-LLDTG 140 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lv-li~~~ 140 (345)
.++++.-+.|...+++.+. ..+.+--|-|=||+.++.+=.-||+-|.+.| .++|.
T Consensus 111 ~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 111 YLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred cccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 4677778888777776653 3689999999999999999999999998777 55665
No 284
>PRK14113 urease accessory protein UreE; Provisional
Probab=27.25 E-value=59 Score=26.38 Aligned_cols=24 Identities=17% Similarity=0.174 Sum_probs=11.6
Q ss_pred HHHHHHHHcCCccccccCCCCchh
Q 019157 273 KHIADFVSSLPKTVRQVEEEPIPE 296 (345)
Q Consensus 273 ~~I~~fl~~~~~~~~~~~~~~~~~ 296 (345)
..|.++|..+.......+..=.||
T Consensus 112 ~vl~~mL~~lG~~v~~~~~pf~Pe 135 (152)
T PRK14113 112 HVLEDLAENYGLSVNHEPAVFEPE 135 (152)
T ss_pred HHHHHHHHhCCCeeEEeEeccCCC
Confidence 344555555554444444333554
No 285
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=27.10 E-value=55 Score=29.24 Aligned_cols=44 Identities=11% Similarity=0.202 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHcCCCcEE-EEEeCchHHHHHHHHHHCCCccceEEE
Q 019157 92 VGRVLGQVIDTFNLAPVH-LVLHDSALPMSANWVAENPGSVKSLTL 136 (345)
Q Consensus 92 ~~~~l~~ll~~l~~~~~~-lvGhS~Gg~ia~~~A~~~p~~v~~lvl 136 (345)
.+-.|.++++.-. .++. ++|.|+|+.-+..+.++.+.+-+++++
T Consensus 26 TAGVLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 26 TAGVLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred hHHHHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 3677778885544 3444 899999999999999999888766663
No 286
>PF03002 Somatostatin: Somatostatin/Cortistatin family; InterPro: IPR018142 Somatostatin inhibits the release of the pituitary growth hormone, somatotropin and inhibits the release of glucagon and insulin from the pancreas of fasted animals. Cortistatin is a cortical neuropeptide with neuronal depressant and sleep-modulating properties [].; GO: 0005179 hormone activity, 0005576 extracellular region
Probab=26.86 E-value=23 Score=17.36 Aligned_cols=7 Identities=57% Similarity=1.388 Sum_probs=5.1
Q ss_pred ccccccc
Q 019157 51 KGFFWAF 57 (345)
Q Consensus 51 ~~~~~~~ 57 (345)
|+|||..
T Consensus 8 knffWK~ 14 (18)
T PF03002_consen 8 KNFFWKT 14 (18)
T ss_pred cceeecc
Confidence 6789853
No 287
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=26.46 E-value=2.2e+02 Score=23.47 Aligned_cols=27 Identities=19% Similarity=0.241 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCch
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSA 116 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~G 116 (345)
+++.+.+.++.+..+.+++.||-.|.|
T Consensus 62 ~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 62 PEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 467888888887777668999999985
No 288
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=26.35 E-value=99 Score=24.99 Aligned_cols=41 Identities=12% Similarity=0.081 Sum_probs=29.5
Q ss_pred ccChHHHHHHHHHHHHHcCCCcEEEEEeC-chHHHHHHHHHHC
Q 019157 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHD-SALPMSANWVAEN 127 (345)
Q Consensus 86 ~~~~~~~~~~l~~ll~~l~~~~~~lvGhS-~Gg~ia~~~A~~~ 127 (345)
.|..+.+++.|.++++..+. .++|+|++ .|.-++.++|.+.
T Consensus 72 ~~~~~~~a~~l~~~~~~~~~-~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 72 EYDPEAYADALAELIKEEGP-DLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp TC-HHHHHHHHHHHHHHHT--SEEEEESSHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhcCC-CEEEEcCcCCCCcHHHHHHHHh
Confidence 34568899999999999764 47788876 4556777777654
No 289
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=25.60 E-value=2.5e+02 Score=27.15 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCchHHHHHHHHHHCCCc--cceEEEE
Q 019157 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS--VKSLTLL 137 (345)
Q Consensus 90 ~~~~~~l~~ll~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~--v~~lvli 137 (345)
+++.+.+.++-+.+....+.+|--+|=|.-|...|..+-+. +.++|+.
T Consensus 198 e~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 56888888998999989999999999999999999887664 6788874
No 290
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=25.46 E-value=2.4e+02 Score=25.26 Aligned_cols=18 Identities=17% Similarity=0.394 Sum_probs=14.1
Q ss_pred ccCceEEEeeCCCCCCCC
Q 019157 7 SKKFNVIAVDLPGNGFSD 24 (345)
Q Consensus 7 ~~G~~vi~~Dl~G~G~S~ 24 (345)
.++|.++.+|-+|....+
T Consensus 152 ~~~~D~ViIDT~G~~~~d 169 (272)
T TIGR00064 152 ARNIDVVLIDTAGRLQNK 169 (272)
T ss_pred HCCCCEEEEeCCCCCcch
Confidence 457999999999987643
No 291
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=25.03 E-value=81 Score=28.72 Aligned_cols=30 Identities=10% Similarity=0.019 Sum_probs=23.5
Q ss_pred HcCCCcEEEEEeCchHHHHHHHHHHCCCcc
Q 019157 102 TFNLAPVHLVLHDSALPMSANWVAENPGSV 131 (345)
Q Consensus 102 ~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v 131 (345)
..++.+-+++|.|.|+.++..++....+.+
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 346677789999999999999998654444
No 292
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=24.98 E-value=1e+02 Score=27.02 Aligned_cols=20 Identities=5% Similarity=-0.054 Sum_probs=18.2
Q ss_pred EEEEeCchHHHHHHHHHHCC
Q 019157 109 HLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 109 ~lvGhS~Gg~ia~~~A~~~p 128 (345)
.++|-|.|+.++..+|...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 79999999999999998764
No 293
>PF04794 YdjC: YdjC-like protein; InterPro: IPR006879 This entry contains ChbG (YdjC), which is is an uncharacterised protein encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source [, ]. The entry also contains HpnK, which is a protein associated with hopanoid biosynthesis.; PDB: 2E67_C 2I5I_B.
Probab=24.93 E-value=1e+02 Score=27.32 Aligned_cols=57 Identities=23% Similarity=0.338 Sum_probs=40.8
Q ss_pred hhhhhhhhccccccchh---hhhccCchhHHHHHHhhhhhccccccccChHHHHHHHHHHHHHcCCCcEEEEEeCchH
Q 019157 43 DVYGLIQEKGFFWAFDQ---IVETGQIPYEEILKARVLERKSVKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSAL 117 (345)
Q Consensus 43 ~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~lvGhS~Gg 117 (345)
..-++..++|.||..-. ....+.+.++++. .++...+..+++ +|..|-+|=||...-
T Consensus 73 ~vpsLvd~~G~F~~~~~~~~~~~~~~~~~~ev~-----------------~E~~AQi~~f~~-~G~~P~hiD~H~h~h 132 (261)
T PF04794_consen 73 QVPSLVDEDGYFPRSKRLLRRALLRRADYEEVE-----------------RELRAQIERFLD-MGRKPDHIDGHQHVH 132 (261)
T ss_dssp TSGGGBBTTTBB-SCC----HCHCCC--HHHHH-----------------HHHHHHHHHHHC-CSS-ECEEEEGGGGG
T ss_pred CCCCccCCCCccCCccccchhhhhccCCHHHHH-----------------HHHHHHHHHHHH-cCCCCCeEecccccc
Confidence 45567788899997652 2245677788887 689999999999 999999999997665
No 294
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=24.54 E-value=2.5e+02 Score=20.95 Aligned_cols=79 Identities=15% Similarity=0.047 Sum_probs=51.2
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEEcCCccccccCHHHHHHHHHHHHHcCCccccccCCCCchhHHHHHH
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQVDSADELAKHIADFVSSLPKTVRQVEEEPIPEHIQKMF 302 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i~~GH~~~~e~pe~v~~~I~~fl~~~~~~~~~~~~~~~~~~~~~~~ 302 (345)
+-++|++.|+-|.|.............+....+.++..-.-..+- .=...+.+|++...++...+.-..+|+.+...+
T Consensus 10 ~~~tL~LsGeL~r~tl~~lw~~r~~~~~~~~~~~idLs~v~rvDS--aglALL~~~~~~~k~~g~~~~L~~~p~~L~tLa 87 (99)
T COG3113 10 DGDTLVLSGELDRDTLLPLWSQREAQLKQLDTVRIDLSGVSRVDS--AGLALLLHLIRLAKKQGNAVTLTGVPEQLRTLA 87 (99)
T ss_pred CCCeEEEeccccHHHHHHHHHHHHHHccccCeEEEehhhcceech--HHHHHHHHHHHHHHHcCCeeEEecCcHHHHHHH
Confidence 358999999977888776666666666765566555433333332 334677778777666655555556777766655
Q ss_pred h
Q 019157 303 D 303 (345)
Q Consensus 303 ~ 303 (345)
+
T Consensus 88 ~ 88 (99)
T COG3113 88 E 88 (99)
T ss_pred H
Confidence 4
No 295
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=23.47 E-value=40 Score=32.13 Aligned_cols=55 Identities=13% Similarity=0.275 Sum_probs=37.2
Q ss_pred CEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cCCccccc-----cCHHHHHHHHHHHHHc
Q 019157 225 PMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQV-----DSADELAKHIADFVSS 281 (345)
Q Consensus 225 PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~GH~~~~-----e~pe~v~~~I~~fl~~ 281 (345)
.+++|.|+ .|+|....-.+.+...+..+.+. ++.|...+ +..++....|.+|..-
T Consensus 353 rmlFVYG~--nDPW~A~~f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaGv 413 (448)
T PF05576_consen 353 RMLFVYGE--NDPWSAEPFRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAGV 413 (448)
T ss_pred eEEEEeCC--CCCcccCccccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcCC
Confidence 58999999 99999665555544456666666 78886443 3345566777777653
No 296
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=22.90 E-value=4.9e+02 Score=24.87 Aligned_cols=51 Identities=8% Similarity=0.051 Sum_probs=38.8
Q ss_pred cChHHHHHHHHHHHHHcC----CCcEEEEEeCchHHHHHHHHHHCCCccceEEEE
Q 019157 87 LGSDEVGRVLGQVIDTFN----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLL 137 (345)
Q Consensus 87 ~~~~~~~~~l~~ll~~l~----~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvli 137 (345)
..++.+++.+..++..+- +.-++-+|-|.|..++.......|--+-++++.
T Consensus 72 ~ai~~M~~ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 72 EAIEAMARGAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 344667777777766553 467889999999999999999888877777653
No 297
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=22.14 E-value=2.3e+02 Score=25.43 Aligned_cols=52 Identities=21% Similarity=0.410 Sum_probs=33.7
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cC-Cccc-cccCHHHHHHHHHHHHH
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SG-GRWP-QVDSADELAKHIADFVS 280 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~-GH~~-~~e~pe~v~~~I~~fl~ 280 (345)
.+||.++.|+ |... ++....+|+.+.+.+ .+ |++. ..-.|++..+.|.+-.+
T Consensus 147 gVPV~lVsGD---d~~~---~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~ 201 (270)
T cd08769 147 GVPVVLVAGD---SELE---KEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVK 201 (270)
T ss_pred CCCEEEEecC---HHHH---HHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHH
Confidence 6999999998 4444 344445699999988 43 6543 33456666666655543
No 298
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=21.95 E-value=2.4e+02 Score=25.20 Aligned_cols=53 Identities=19% Similarity=0.168 Sum_probs=36.9
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cC-CccccccCHHHHHHHHHHHHHc
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SG-GRWPQVDSADELAKHIADFVSS 281 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~-GH~~~~e~pe~v~~~I~~fl~~ 281 (345)
.+||.++.|+ |...+.+ ...+|+.+.+.+ .+ |.....-.|++..+.|.+-.++
T Consensus 147 gVPV~lvsGD---~~~~~ea---~~~~P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~~~~~ 201 (263)
T cd08770 147 GVPVVFVSGD---AGLCAEA---KELNPNIVTVPVKEGFGGATISIHPGLACKEIRKGVKK 201 (263)
T ss_pred CCCEEEEecC---HHHHHHH---HHhCCCceEEEeeeeeccccccCCHHHHHHHHHHHHHH
Confidence 6999999998 5555444 345699998888 33 6433444678888887777643
No 299
>PRK10867 signal recognition particle protein; Provisional
Probab=21.10 E-value=3.7e+02 Score=25.98 Aligned_cols=18 Identities=22% Similarity=0.433 Sum_probs=13.4
Q ss_pred hccCceEEEeeCCCCCCC
Q 019157 6 RSKKFNVIAVDLPGNGFS 23 (345)
Q Consensus 6 ~~~G~~vi~~Dl~G~G~S 23 (345)
...+|.+|.+|-+|....
T Consensus 180 ~~~~~DvVIIDTaGrl~~ 197 (433)
T PRK10867 180 KENGYDVVIVDTAGRLHI 197 (433)
T ss_pred HhcCCCEEEEeCCCCccc
Confidence 345688999999987643
No 300
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=20.71 E-value=1.3e+02 Score=26.44 Aligned_cols=36 Identities=8% Similarity=-0.095 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcC-CCcEEEEEeCchHHHHHHHHHHCC
Q 019157 93 GRVLGQVIDTFN-LAPVHLVLHDSALPMSANWVAENP 128 (345)
Q Consensus 93 ~~~l~~ll~~l~-~~~~~lvGhS~Gg~ia~~~A~~~p 128 (345)
+-.+..+.++-. +..-.++|-|.|+.++..+|...+
T Consensus 16 ~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 16 VGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 334444444321 222349999999999999998654
No 301
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=20.55 E-value=2.4e+02 Score=25.21 Aligned_cols=52 Identities=17% Similarity=0.219 Sum_probs=36.2
Q ss_pred CCCEEEEEecCCCCcchHhHHHHHhhCCCCeEEEE-cC-Cc-cccccCHHHHHHHHHHHHH
Q 019157 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SG-GR-WPQVDSADELAKHIADFVS 280 (345)
Q Consensus 223 ~~PvliI~G~~D~D~~~~~~~~~~~~~~~~~~~~i-~~-GH-~~~~e~pe~v~~~I~~fl~ 280 (345)
.+|+.++.|+ |...+.++. ..|+.+.+.+ .+ |. ..-.-.|++..+.|.+=.+
T Consensus 147 gVPV~lVsGD---d~~~~ea~~---~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~ 201 (266)
T cd08663 147 GVPVVLVTGD---DAACAEARE---LGPGVETVAVKEAIGRFAARCLPPAEARALIREAAA 201 (266)
T ss_pred CCCEEEEecC---HHHHHHHHh---hCCCcEEEEEecccCCCccccCCHHHHHHHHHHHHH
Confidence 6999999998 565554443 5799999888 43 64 3444567777777776663
No 302
>PF14117 DUF4287: Domain of unknown function (DUF4287)
Probab=20.51 E-value=24 Score=23.78 Aligned_cols=7 Identities=57% Similarity=0.909 Sum_probs=4.0
Q ss_pred ccCCCCC
Q 019157 337 YGLGHTW 343 (345)
Q Consensus 337 ~~~~~~~ 343 (345)
||||||.
T Consensus 44 hgLghGh 50 (61)
T PF14117_consen 44 HGLGHGH 50 (61)
T ss_pred HCCChHH
Confidence 5666654
Done!