Your job contains 1 sequence.
>019158
MSLLNPKISSPFPFPHSLHSPPQSKFHKLFPSQPLNLPTAATTKLYSLSPLQQEPDYLLL
QNEDRVIGDCLVFEEGVFEDPYLENDNVPPPRKPRRSRGKQNVVQVEAENLVPDKWKQVQ
EELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNSLDLKEYLAYKEAKLSQLNPPLVLDK
PSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNY
DPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHN
VDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEVMWK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019158
(345 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006718 - symbol:AKRP "ankyrin repeat protei... 849 8.0e-85 1
TAIR|locus:2173767 - symbol:EMB506 "embryo defective 506"... 207 3.3e-15 1
UNIPROTKB|Q5EA33 - symbol:ANKRD49 "Ankyrin repeat domain-... 120 5.0e-05 1
UNIPROTKB|Q8WVL7 - symbol:ANKRD49 "Ankyrin repeat domain-... 118 8.7e-05 1
UNIPROTKB|F1P1R3 - symbol:PSMD10 "Uncharacterized protein... 113 0.00014 1
UNIPROTKB|Q2KI59 - symbol:PSMD10 "Proteasome (Prosome, ma... 106 0.00016 1
UNIPROTKB|F1STJ8 - symbol:ANKRD49 "Uncharacterized protei... 115 0.00019 1
TAIR|locus:2178426 - symbol:ACBP1 "acyl-CoA binding prote... 117 0.00025 1
UNIPROTKB|Q9BR61 - symbol:ACBD6 "Acyl-CoA-binding domain-... 115 0.00030 1
DICTYBASE|DDB_G0287459 - symbol:secG "Arf guanyl-nucleoti... 120 0.00055 1
RGD|620350 - symbol:Psmd10 "proteasome (prosome, macropai... 109 0.00088 1
RGD|1311759 - symbol:Ankrd49 "ankyrin repeat domain 49" s... 109 0.00097 1
>TAIR|locus:505006718 [details] [associations]
symbol:AKRP "ankyrin repeat protein" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS;IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110 Pfam:PF00023
PROSITE:PS50088 SMART:SM00248 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:M82883 EMBL:AB011474 EMBL:AK117484
EMBL:AY052363 EMBL:BT001055 IPI:IPI00523216 IPI:IPI00545683
PIR:JQ1729 RefSeq:NP_569027.2 RefSeq:NP_975000.1 UniGene:At.68506
ProteinModelPortal:Q05753 SMR:Q05753 IntAct:Q05753 STRING:Q05753
PRIDE:Q05753 EnsemblPlants:AT5G66055.1 GeneID:836737
KEGG:ath:AT5G66055 GeneFarm:2586 TAIR:At5g66055
HOGENOM:HOG000239703 InParanoid:Q05753 OMA:KIAQEME PhylomeDB:Q05753
ProtClustDB:CLSN2680622 Genevestigator:Q05753 Uniprot:Q05753
Length = 435
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 172/307 (56%), Positives = 220/307 (71%)
Query: 40 AATTKLYSLSPLQQEPDYLLLQNEDRVIGDCLVFEEGVFEDPYLEND--NVXXXXXXXXX 97
A T+L SLS + L +D ++GDCLV+E+GVFEDPYL+ + V
Sbjct: 30 AFPTRLRSLS-YSSQTSILPDAGDDFIVGDCLVYEDGVFEDPYLDKEVTQVAKQERKKNR 88
Query: 98 XG---KQNVVQVEAENLVPDKWKQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLN 154
G + + ++E ENLVP++W+ +Q E+NLTKK+KR+IA ++EFG RVEKK+QG +PL
Sbjct: 89 RGGAKRLDESEIEPENLVPEEWRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIPLR 148
Query: 155 SLDLKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEEDRDCGFQDFVNSSSSTCTQRV 214
+DL ++L YKEAKL+QL P ++LDKP F D+ S + V+S S +RV
Sbjct: 149 KVDLNDFLTYKEAKLAQLRP-VILDKPGNFSDDSGASSDGETA-----VSSPS----ERV 198
Query: 215 PPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATAT 274
PKNP+WAVYG+G D V++FFNS YDP DKKSDGPR KL +KEEK +LN + P LA AT
Sbjct: 199 APKNPRWAVYGKGFDHVAKFFNSDKYDPSDKKSDGPR-KLLSKEEKFMLNSRNPDLAVAT 257
Query: 275 SKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESA 334
SKKWLPLH+LAA GEFY VD+LLKHN+DINA D GLT LH+AIIGKKQA+TNYLLRESA
Sbjct: 258 SKKWLPLHTLAACGEFYLVDSLLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRESA 317
Query: 335 NPFVVDE 341
NPFV+D+
Sbjct: 318 NPFVLDD 324
>TAIR|locus:2173767 [details] [associations]
symbol:EMB506 "embryo defective 506" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:AB010699 UniGene:At.68513 UniGene:At.70297
EMBL:AF026167 EMBL:AY063792 EMBL:AY117280 IPI:IPI00538085
RefSeq:NP_198832.1 UniGene:At.48057 HSSP:P55273
ProteinModelPortal:Q9SQK3 SMR:Q9SQK3 IntAct:Q9SQK3 STRING:Q9SQK3
PRIDE:Q9SQK3 EnsemblPlants:AT5G40160.1 GeneID:834014
KEGG:ath:AT5G40160 GeneFarm:2220 TAIR:At5g40160
HOGENOM:HOG000241764 InParanoid:Q9SQK3 OMA:GANPHVR PhylomeDB:Q9SQK3
ProtClustDB:CLSN2687532 Genevestigator:Q9SQK3 Uniprot:Q9SQK3
Length = 315
Score = 207 (77.9 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 50/116 (43%), Positives = 73/116 (62%)
Query: 229 DD--VSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLL--NKKLPHLATATSKKWLPLHSL 284
DD V + + NY+ K +L EE+V+L N+K P+L ++K W PL +L
Sbjct: 104 DDSRVQKLTTTDNYEEELAKEV---EQLLEPEERVILQQNEK-PNLKMISTKSWKPLQTL 159
Query: 285 AASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVD 340
A S + +D L+++ +DI+ VDKD TALHKAIIGKK+AV ++LLR+ ANP + D
Sbjct: 160 ALSMQIQLMDNLIENGLDIDDVDKDNQTALHKAIIGKKEAVISHLLRKGANPHLQD 215
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 36/113 (31%), Positives = 52/113 (46%)
Query: 228 LDDVSEFFNSGNYDPPDKKSDGPRRK-LFTKEEKV---LLNKKL-PHLATATSKKWLPLH 282
+D++ E N + D DK + K + K+E V LL K PHL P+H
Sbjct: 168 MDNLIE--NGLDIDDVDKDNQTALHKAIIGKKEAVISHLLRKGANPHLQDRDGAA--PIH 223
Query: 283 SLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
G V L K+NVD+N D +G T LH A+ + + +T LL A+
Sbjct: 224 YAVQVGALQTVKLLFKYNVDVNVADNEGWTPLHIAVQSRNRDITKILLTNGAD 276
>UNIPROTKB|Q5EA33 [details] [associations]
symbol:ANKRD49 "Ankyrin repeat domain-containing protein
49" species:9913 "Bos taurus" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR002110
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0045893
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BT020736 EMBL:BC104574 IPI:IPI00690590
RefSeq:NP_001014965.1 UniGene:Bt.28711 ProteinModelPortal:Q5EA33
Ensembl:ENSBTAT00000048242 GeneID:540949 KEGG:bta:540949 CTD:54851
GeneTree:ENSGT00390000003919 HOGENOM:HOG000021411
HOVERGEN:HBG054416 InParanoid:Q5EA33 OMA:LHSACRW OrthoDB:EOG4PG620
NextBio:20878928 Uniprot:Q5EA33
Length = 238
Score = 120 (47.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK 321
LL+++ H+ T K+ PLH A +G V L+ H D++AV DG T LH A
Sbjct: 92 LLSERATHVNTRDEDKYTPLHRAAYNGHLDVVRELIAHGADVHAVTVDGWTPLHSACKWN 151
Query: 322 KQAVTNYLLRESAN 335
V ++LL+ A+
Sbjct: 152 NARVASFLLQHDAD 165
>UNIPROTKB|Q8WVL7 [details] [associations]
symbol:ANKRD49 "Ankyrin repeat domain-containing protein
49" species:9606 "Homo sapiens" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR002110 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0005634 GO:GO:0045893 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 CTD:54851 HOGENOM:HOG000021411 HOVERGEN:HBG054416
OMA:LHSACRW OrthoDB:EOG4PG620 EMBL:AF025354 EMBL:AK000196
EMBL:AL833977 EMBL:BC017798 IPI:IPI00549612 RefSeq:NP_060174.2
UniGene:Hs.29052 ProteinModelPortal:Q8WVL7 SMR:Q8WVL7 STRING:Q8WVL7
PhosphoSite:Q8WVL7 DMDM:74751554 PRIDE:Q8WVL7 DNASU:54851
Ensembl:ENST00000302755 Ensembl:ENST00000544612 GeneID:54851
KEGG:hsa:54851 UCSC:uc001pew.3 GeneCards:GC11P094227
HGNC:HGNC:25970 HPA:HPA040273 neXtProt:NX_Q8WVL7
PharmGKB:PA142672615 InParanoid:Q8WVL7 PhylomeDB:Q8WVL7
GenomeRNAi:54851 NextBio:57700 ArrayExpress:Q8WVL7 Bgee:Q8WVL7
CleanEx:HS_ANKRD49 Genevestigator:Q8WVL7 GermOnline:ENSG00000168876
Uniprot:Q8WVL7
Length = 239
Score = 118 (46.6 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 36/115 (31%), Positives = 52/115 (45%)
Query: 229 DDVSEFFNSGNYDPPDKKSD-GPRRKLFTKEEKV-------LLNKKLPHLATATSKKWLP 280
D+ + N Y +KK + P R L EK LL++K H+ T ++ P
Sbjct: 52 DEEQDDKNEEWYRLQEKKMEKDPSRLLLWAAEKNRLTTVRRLLSEKATHVNTRDEDEYTP 111
Query: 281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
LH A SG V L+ D++AV DG T LH A V ++LL+ A+
Sbjct: 112 LHRAAYSGHLDIVQELIAQGADVHAVTVDGWTPLHSACKWNNTRVASFLLQHDAD 166
>UNIPROTKB|F1P1R3 [details] [associations]
symbol:PSMD10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007253 "cytoplasmic sequestering of NF-kappaB" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043409
"negative regulation of MAPK cascade" evidence=IEA] [GO:0043518
"negative regulation of DNA damage response, signal transduction by
p53 class mediator" evidence=IEA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA] [GO:0045737 "positive
regulation of cyclin-dependent protein kinase activity"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0090201 "negative regulation of release of
cytochrome c from mitochondria" evidence=IEA] InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0030307
GO:GO:0015629 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000122 GO:GO:0043518
GO:GO:0045111 GO:GO:0031398 GO:GO:0032088 GO:GO:0090201
GeneTree:ENSGT00560000077131 GO:GO:0043409 GO:GO:0045737
GO:GO:0007253 GO:GO:0070682 GO:GO:0008540 OMA:ATDHFES
EMBL:AADN02013579 IPI:IPI00577150 Ensembl:ENSGALT00000013485
Uniprot:F1P1R3
Length = 189
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
W PLH A++G V AL+ INAV+++G T LH A KQ + LL A+P
Sbjct: 37 WTPLHIAASAGRDEIVKALIDKGAPINAVNQNGCTPLHYAASKNKQEIAIMLLENGADPD 96
Query: 338 VVD 340
D
Sbjct: 97 ATD 99
>UNIPROTKB|Q2KI59 [details] [associations]
symbol:PSMD10 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 10" species:9913 "Bos taurus" [GO:0090201 "negative
regulation of release of cytochrome c from mitochondria"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0045737 "positive regulation of cyclin-dependent
protein kinase activity" evidence=IEA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA] [GO:0043518 "negative
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0043409 "negative regulation of MAPK
cascade" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0030307 "positive regulation of cell growth"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007253 "cytoplasmic sequestering of NF-kappaB"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0005634 GO:GO:0005737 GO:GO:0043066
GO:GO:0030307 GO:GO:0015629 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0000122 GO:GO:0043518 GO:GO:0045111 GO:GO:0031398
GO:GO:0032088 GO:GO:0090201 GeneTree:ENSGT00560000077131
HOGENOM:HOG000158359 GO:GO:0043409 KO:K06694 GO:GO:0045737
GO:GO:0007253 GO:GO:0070682 GO:GO:0008540 CTD:5716
HOVERGEN:HBG053737 OrthoDB:EOG45490J EMBL:DAAA02071498
EMBL:BC112760 IPI:IPI00699764 RefSeq:NP_001039871.1
UniGene:Bt.19721 SMR:Q2KI59 STRING:Q2KI59
Ensembl:ENSBTAT00000018226 GeneID:535414 KEGG:bta:535414
InParanoid:Q2KI59 OMA:SKEVTEV NextBio:20876739 Uniprot:Q2KI59
Length = 151
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPF 337
W PLH A++G V ALL +NAV+++G T LH A + + LL ANP
Sbjct: 74 WSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD 133
Query: 338 VVD 340
D
Sbjct: 134 AKD 136
>UNIPROTKB|F1STJ8 [details] [associations]
symbol:ANKRD49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 GO:GO:0045893 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00390000003919 OMA:LHSACRW EMBL:FP236710
RefSeq:XP_003129838.1 UniGene:Ssc.43824 Ensembl:ENSSSCT00000016317
GeneID:100516989 KEGG:ssc:100516989 Uniprot:F1STJ8
Length = 239
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 262 LLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGK 321
LL++K H+ T ++ PLH A SG V L+ + D++AV DG T LH A
Sbjct: 93 LLSEKATHVNTRDEDEYTPLHRAAYSGHLDVVRELIANGADVHAVTVDGWTPLHSACKWN 152
Query: 322 KQAVTNYLLRESAN 335
V ++LL+ A+
Sbjct: 153 NTRVASFLLQHDAD 166
>TAIR|locus:2178426 [details] [associations]
symbol:ACBP1 "acyl-CoA binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006869 "lipid transport" evidence=TAS]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0010288
"response to lead ion" evidence=IEP;IMP] [GO:0032791 "lead ion
binding" evidence=IDA] [GO:0006629 "lipid metabolic process"
evidence=IMP] [GO:0009409 "response to cold" evidence=IMP]
[GO:0070300 "phosphatidic acid binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008289 "lipid binding"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0010029 "regulation of seed germination"
evidence=IMP] [GO:0010162 "seed dormancy process" evidence=IMP]
[GO:1900140 "regulation of seedling development" evidence=IMP]
[GO:0000062 "fatty-acyl-CoA binding" evidence=IDA]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248 GO:GO:0016021
GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005576
GO:GO:0006869 GO:GO:0005789 GO:GO:0010288 Gene3D:1.20.80.10
InterPro:IPR014352 eggNOG:COG0666 GO:GO:0009409 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0006629 GO:GO:0000062 SUPFAM:SSF47027 PROSITE:PS00880
HOGENOM:HOG000241133 EMBL:U75273 EMBL:U75274 EMBL:AB020754
EMBL:AY059881 EMBL:AY093383 EMBL:AY087475 IPI:IPI00535196
RefSeq:NP_200159.1 UniGene:At.8952 HSSP:Q9BR61
ProteinModelPortal:Q9SM23 SMR:Q9SM23 IntAct:Q9SM23 PaxDb:Q9SM23
PRIDE:Q9SM23 EnsemblPlants:AT5G53470.1 GeneID:835428
KEGG:ath:AT5G53470 TAIR:At5g53470 InParanoid:Q9SM23 OMA:QLQLYGL
PhylomeDB:Q9SM23 ProtClustDB:CLSN2685520 Genevestigator:Q9SM23
GO:GO:0009505 GO:GO:0032791 GO:GO:0070300 Uniprot:Q9SM23
Length = 338
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 280 PLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVV 339
PLH G +AL+ N D+NA D +G T+LH A++ +++A+ +L+++ A+ +
Sbjct: 254 PLHWAIDRGHLNVAEALVDKNADVNAKDNEGQTSLHYAVVCEREALAEFLVKQKADTTIK 313
Query: 340 DE 341
DE
Sbjct: 314 DE 315
>UNIPROTKB|Q9BR61 [details] [associations]
symbol:ACBD6 "Acyl-CoA-binding domain-containing protein 6"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR002110
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248 GO:GO:0005634
GO:GO:0005737 Gene3D:1.20.80.10 InterPro:IPR014352 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000062 GO:GO:0008289 SUPFAM:SSF47027
PROSITE:PS00880 CTD:84320 HOGENOM:HOG000241133 HOVERGEN:HBG080775
OrthoDB:EOG4THVTS EMBL:AL445469 EMBL:AL139141 EMBL:AL358354
EMBL:BC006505 IPI:IPI00031680 RefSeq:NP_115736.1 UniGene:Hs.200051
PDB:2COP PDBsum:2COP ProteinModelPortal:Q9BR61 SMR:Q9BR61
IntAct:Q9BR61 STRING:Q9BR61 PhosphoSite:Q9BR61 DMDM:74762703
PaxDb:Q9BR61 PRIDE:Q9BR61 Ensembl:ENST00000367595 GeneID:84320
KEGG:hsa:84320 UCSC:uc001gog.3 GeneCards:GC01M180244
HGNC:HGNC:23339 HPA:HPA028179 neXtProt:NX_Q9BR61
PharmGKB:PA134925459 InParanoid:Q9BR61 OMA:QQHTTGK PhylomeDB:Q9BR61
EvolutionaryTrace:Q9BR61 GenomeRNAi:84320 NextBio:74044 Bgee:Q9BR61
CleanEx:HS_ACBD6 Genevestigator:Q9BR61 GermOnline:ENSG00000135847
Uniprot:Q9BR61
Length = 282
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 55/208 (26%), Positives = 82/208 (39%)
Query: 148 QGYLPLNSLD--LKEYLAYKEAKLSQLNPPLVLDKPSTFPTDAKESEED-RDCG------ 198
QG + + S + L Y YK+ K+ N P KPS F + K+ E + G
Sbjct: 54 QGLIQVASREQLLYLYARYKQVKVGNCNTP----KPSFFDFEGKQKWEAWKALGDSSPSQ 109
Query: 199 -FQDF---VNSSSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKS-DGPRRK 253
Q++ V ++P K K A G G +S ++ DK D R
Sbjct: 110 AMQEYIAVVKKLDPGWNPQIPEKKGKEANTGFGGPVISSLYHEETIREEDKNIFDYCREN 169
Query: 254 LFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTA 313
K + +K + + L LH G V LL+H DIN D +G TA
Sbjct: 170 NIDHITKAIKSKNVDVNVKDEEGRAL-LHWACDRGHKELVTVLLQHRADINCQDNEGQTA 228
Query: 314 LHKAIIGKKQAVTNYLLRESANPFVVDE 341
LH A + + LL+ A+P + D+
Sbjct: 229 LHYASACEFLDIVELLLQSGADPTLRDQ 256
>DICTYBASE|DDB_G0287459 [details] [associations]
symbol:secG "Arf guanyl-nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0031589
"cell-substrate adhesion" evidence=IMP] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0005764
"lysosome" evidence=IDA] [GO:0032012 "regulation of ARF protein
signal transduction" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005086 "ARF guanyl-nucleotide exchange
factor activity" evidence=IEA] Pfam:PF00169 InterPro:IPR002110
InterPro:IPR000904 InterPro:IPR001849 Pfam:PF01369 PRINTS:PR01415
PROSITE:PS50003 PROSITE:PS50088 PROSITE:PS50190 SMART:SM00222
SMART:SM00233 SMART:SM00248 dictyBase:DDB_G0287459 GO:GO:0005829
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GenomeReviews:CM000154_GR GO:GO:0005764
GO:GO:0006935 EMBL:AAFI02000101 GO:GO:0031589 GO:GO:0005086
GO:GO:0032012 Gene3D:1.10.1000.11 InterPro:IPR023394
SUPFAM:SSF48425 HSSP:Q99418 EMBL:U78755 RefSeq:XP_637214.1
ProteinModelPortal:Q54KA7 EnsemblProtists:DDB0191439 GeneID:8626150
KEGG:ddi:DDB_G0287459 Uniprot:Q54KA7
Length = 986
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 41/122 (33%), Positives = 58/122 (47%)
Query: 220 KWAVYGRG-LDDVSEFFNSGNYD--PPDKKSDGPRRK--LFTKEEKVL--LNKKLPHLAT 272
+WA RG L+ + G D D K+ P K LF E VL LN K A
Sbjct: 107 QWAS-SRGHLECIKLLVEKGGVDVNTKDDKNGTPLHKASLFASAECVLYLLNGKADPRAV 165
Query: 273 ATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRE 332
T+ + PLH +A G V+ L+K + +NAVD D +T LH+A + + LL++
Sbjct: 166 TTNGE-TPLHHASAGGNPQCVELLIKADSKVNAVDNDCITPLHQASFSGHSSCVSLLLKK 224
Query: 333 SA 334
A
Sbjct: 225 GA 226
>RGD|620350 [details] [associations]
symbol:Psmd10 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 10" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007253 "cytoplasmic sequestering of
NF-kappaB" evidence=ISO;ISS] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0015629 "actin cytoskeleton"
evidence=ISO] [GO:0030307 "positive regulation of cell growth"
evidence=ISO;ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISO;ISS] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043409
"negative regulation of MAPK cascade" evidence=ISO;ISS] [GO:0043518
"negative regulation of DNA damage response, signal transduction by
p53 class mediator" evidence=ISO;ISS] [GO:0045111 "intermediate
filament cytoskeleton" evidence=ISO] [GO:0045737 "positive
regulation of cyclin-dependent protein kinase activity"
evidence=ISO;ISS] [GO:0070682 "proteasome regulatory particle
assembly" evidence=ISO;ISS] [GO:0090201 "negative regulation of
release of cytochrome c from mitochondria" evidence=ISO;ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISO] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 RGD:620350 GO:GO:0005634
GO:GO:0005737 GO:GO:0006915 GO:GO:0043066 GO:GO:0030307
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000122 GO:GO:0043518 GO:GO:0031398
GO:GO:0032088 GO:GO:0090201 GO:GO:0032436 GO:GO:0043409 KO:K06694
GO:GO:0045737 GO:GO:0007253 GO:GO:0070682 CTD:5716
HOVERGEN:HBG053737 EMBL:AB022014 IPI:IPI00210361 RefSeq:NP_446377.1
UniGene:Rn.116732 UniGene:Rn.18378 ProteinModelPortal:Q9Z2X3
SMR:Q9Z2X3 GeneID:116722 KEGG:rno:116722 NextBio:619636
Genevestigator:Q9Z2X3 Uniprot:Q9Z2X3
Length = 231
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 278 WLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANP 336
W PLH A++G V ALL +NAV+++G TALH A + + LL ANP
Sbjct: 74 WSPLHIAASAGRDEIVKALLIKGAQVNAVNQNGCTALHYAASKNRHEIAVMLLEGGANP 132
>RGD|1311759 [details] [associations]
symbol:Ankrd49 "ankyrin repeat domain 49" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA;ISO]
InterPro:IPR002110 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
RGD:1311759 GO:GO:0045893 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
CTD:54851 GeneTree:ENSGT00390000003919 HOGENOM:HOG000021411
HOVERGEN:HBG054416 OMA:LHSACRW OrthoDB:EOG4PG620 EMBL:BC161982
IPI:IPI00362286 RefSeq:NP_001119755.1 UniGene:Rn.15268
Ensembl:ENSRNOT00000012583 GeneID:315434 KEGG:rno:315434
UCSC:RGD:1311759 NextBio:669240 Genevestigator:B1WC29
Uniprot:B1WC29
Length = 239
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 229 DDVSEFFNSGNYDPPDKKSDG-PRRKLFTKEEKV-------LLNKKLPHLATATSKKWLP 280
DD E N Y +KK + P + L EK LL++K + T ++ P
Sbjct: 52 DDEQEEKNEEWYQLQEKKLEKEPSKLLLWAAEKNRLATVQRLLSEKAAEVNTRDEDEYTP 111
Query: 281 LHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESAN 335
LH A SG V L+ D++AV DG T LH A V ++LL+ A+
Sbjct: 112 LHRAAYSGHLDVVRELVAQGADVHAVTIDGWTPLHSACKWNNTRVASFLLQHDAD 166
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.133 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 345 319 0.00084 116 3 11 23 0.46 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 609 (65 KB)
Total size of DFA: 222 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.30u 0.17s 31.47t Elapsed: 00:00:01
Total cpu time: 31.30u 0.17s 31.47t Elapsed: 00:00:01
Start: Sat May 11 00:15:36 2013 End: Sat May 11 00:15:37 2013