BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019159
(345 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P96554|Y319_MYXXA Uncharacterized membrane protein STKORF319 OS=Myxococcus xanthus
PE=3 SV=1
Length = 319
Score = 196 bits (497), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 140/214 (65%)
Query: 122 AFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNR 181
A VS A+ FG GV + G +F GY++E+SLSVDN+FVFV+IF ++P +YQ+R
Sbjct: 48 ALWVSLALVFGAGVWWKFGPEPGLQFITGYLIEKSLSVDNIFVFVVIFSALRIPALYQHR 107
Query: 182 VLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFI 241
VL +GI A+ R +I G A L RF + V G L+ + KLF + + + +
Sbjct: 108 VLFWGILSALALRAIMIFAGVAMLARFHWLIYVFGGFLIITGVKLFLQRNKEDNPEEGAL 167
Query: 242 VKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRD 301
++ +R IP T +DG+ FFT ++G + ATPLL+ + ++E SDI FA+DSIPA+F VT D
Sbjct: 168 MRLARRTIPSTPNFDGHHFFTVENGRKLATPLLMALLLVEASDILFALDSIPAIFAVTTD 227
Query: 302 PFIVFSSNLFAILGLRSLFTLISEGMADLEYLQV 335
PFIVF+SN+FAILGLRS+F +++ + YL+V
Sbjct: 228 PFIVFTSNIFAILGLRSMFFMLAGAVEKFSYLKV 261
>sp|P60067|ALX_PHOLL Inner membrane protein alx OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=alx PE=3 SV=1
Length = 320
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 140/232 (60%), Gaps = 9/232 (3%)
Query: 106 RQIEGRESYTSSVKTVAFCVSTAVAFGLG--------VGFIEGASKASEFFAGYILEQSL 157
R+ E S+ + VS ++ F LG VG S+ F GY+LE++L
Sbjct: 30 RKKEQAMSFRQAAVWSVIWVSLSLLFALGLWWYCRETVGVAVANSQVMAFLTGYLLEKAL 89
Query: 158 SVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAG 217
+VDN+FV++++F YF +P Q RVL YG+ GAIV R +I G+ + +F + +
Sbjct: 90 AVDNVFVWLMLFSYFAIPANLQRRVLIYGVLGAIVLRTVMIFAGSWLVSQFSWILYLFGL 149
Query: 218 ILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTV 277
LL + K+ +EDD+ + D V+ + I +T G RFF + G+ ATPL+L +
Sbjct: 150 FLLVTGVKMALVKEDDSPIGDKPFVRWLKAHIRITDNLHGERFFVKEKGLLYATPLILVL 209
Query: 278 AVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMAD 329
++E+SD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L++ G+A+
Sbjct: 210 ILVEISDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLA-GVAE 260
>sp|Q8FDE1|ALX_ECOL6 Inner membrane protein alx OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=alx PE=3 SV=1
Length = 321
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +F+ + + LLF+ K+ + ED++ + D +V+ + + +T D FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMAD 329
++ G+A+
Sbjct: 255 LA-GVAE 260
>sp|P42601|ALX_ECOLI Inner membrane protein alx OS=Escherichia coli (strain K12) GN=alx
PE=1 SV=2
Length = 321
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +F+ + + LLF+ K+ + ED++ + D +V+ + + +T D FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMAD 329
++ G+A+
Sbjct: 255 LA-GVAE 260
>sp|Q83Q35|ALX_SHIFL Inner membrane protein alx OS=Shigella flexneri GN=alx PE=3 SV=1
Length = 320
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +F+ + + LLF+ K+ + ED++ + D +V+ + + +T D FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMAD 329
++ G+A+
Sbjct: 255 LA-GVAE 260
>sp|Q8XAJ0|ALX_ECO57 Inner membrane protein alx OS=Escherichia coli O157:H7 GN=alx PE=3
SV=1
Length = 321
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +F+ + + LLF+ K+ + ED++ + D +V+ + + +T D FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMAD 329
++ G+A+
Sbjct: 255 LA-GVAE 260
>sp|Q8Z3L5|ALX_SALTI Inner membrane protein alx OS=Salmonella typhi GN=alx PE=3 SV=1
Length = 322
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I GT
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPPALQRRVLVYGVLGAIVLRTIMIFAGT 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +FE + V LLF+ K+ ++ED++ + + +V+ + + +T + FF
Sbjct: 135 WLITQFEWLLYVFGAFLLFTGVKMALAKEDESGIGEKPMVRWLRGHLRMTDTIENEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPLLL + ++E SD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLLLVLIMVEFSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMAD 329
+S G+A+
Sbjct: 255 LS-GVAE 260
>sp|Q8ZLX2|ALX_SALTY Inner membrane protein alx OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=alx PE=3 SV=1
Length = 322
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I GT
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPPALQRRVLVYGVLGAIVLRTIMIFAGT 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +FE + V LLF+ K+ ++ED++ + + +V+ + + +T + FF
Sbjct: 135 WLITQFEWLLYVFGAFLLFTGVKMALAKEDESGIGEKPMVRWLRGHLRMTDTIENEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPLLL + ++E SD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLLLVLIMVEFSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMAD 329
+S G+A+
Sbjct: 255 LS-GVAE 260
>sp|Q92GA4|Y1219_RICCN Uncharacterized membrane protein RC1219 OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=RC1219 PE=3 SV=1
Length = 301
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 138/222 (62%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ SV F + A FG+ V + GA A E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKESVLFSLFYLVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
K+P YQ+RVL +GI G I+FR +I G + +F + + A IL+ + K F
Sbjct: 89 KIPWQYQHRVLFFGIIGVIIFRAVMIYGGIILINKFAWLLYIFAVILIATGIKTFYVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ +++I K+ + + +T +GN+F ++ TPL +++ +IE D+ FA+DSI
Sbjct: 149 TFDIQNSYIYKSIIKNLNITPNLEGNKFIVKRNNKLYCTPLFISLVLIEAIDLVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQ 334
PA+F +T D +I+++SN+FAILGLR+LF ++E + Y++
Sbjct: 209 PAIFAITNDVYIIYTSNIFAILGLRALFFCLAEIVERFSYIK 250
>sp|Q1RKF1|Y082_RICBR Uncharacterized membrane protein RBE_0082 OS=Rickettsia bellii
(strain RML369-C) GN=RBE_0082 PE=3 SV=1
Length = 302
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 138/222 (62%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ S+ F + + FG+ + + GA E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKQSLLFSLFYFTISCLFGIYIYYNMGADSTREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
K+P YQ+RVL +GI G I FR +I G + +F + + A IL+ + K F
Sbjct: 89 KIPQKYQHRVLFFGIIGVIAFRAVMIYGGIILINKFSWLLYIFAVILIATGVKTFYVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ ++++ K+ +++ VT +G++FF ++ TPL +++ +IE D+ FA+DSI
Sbjct: 149 TFDIQNSYLYKSIIKYLNVTPNLEGDKFFVTRNKKLYVTPLFISLILIEAIDLVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQ 334
PA+F +T D +I+++SN+FAILGLR+LF ++E + Y++
Sbjct: 209 PAIFAITNDAYIIYTSNIFAILGLRALFFCLAEIVERFSYIK 250
>sp|Q4UK32|Y1252_RICFE Uncharacterized membrane protein RF_1252 OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=RF_1252 PE=3 SV=2
Length = 301
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 137/222 (61%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ SV F A FG+ + GA A E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKESVLFSLFYFVIACLFGIYFYYNTGAEHAREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
K+P YQ+RVL +GI G I+FR +I GT + +F + + A IL+ + K F
Sbjct: 89 KIPGKYQHRVLFFGIIGVIIFRAIMIYGGTILINKFAWLLYIFAVILIATGIKTFYVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ +++I K+ + + +T +G++F ++ TPL +++ +IE D+ FA+DSI
Sbjct: 149 TFDIQNSYIYKSIVKNLNITPNLEGDKFVVKRNNKLYFTPLFISLVLIEAIDLVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQ 334
PA+F +T D +I+++SN+FAILGLR+LF ++E + Y++
Sbjct: 209 PAIFAITNDVYIIYTSNIFAILGLRALFFCLAEIVERFSYIK 250
>sp|Q52356|TERC_SERMA Tellurium resistance protein TerC OS=Serratia marcescens GN=terC
PE=3 SV=1
Length = 346
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 136/241 (56%), Gaps = 34/241 (14%)
Query: 111 RESYTSSVKTVA----FCVSTAVAFGLGVGFI---EGASKASEFFAGYILEQSLSVDNLF 163
R+ S+K+ A F V A+AF GF+ GA AS F GY LE+ LSVDNLF
Sbjct: 32 RDDKPISLKSAALWSVFWVVVAMAFA---GFLYIHHGAEVASLFVTGYALEKVLSVDNLF 88
Query: 164 VFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSS 223
V + IF +F VP Y++RVL +GI GAIVFR + +GT+ L V +V A I+ +++
Sbjct: 89 VMMAIFSWFAVPDRYRHRVLYWGIIGAIVFRGIFVAIGTSLLSLGPYVEVVFAIIVAWTA 148
Query: 224 FKLFASEEDDTDLSD---NFIVKTCQRFIPVTTYYDGNRFFTNQD--------------- 265
+ S +DD ++ D + + +RF P+ G+ F NQ
Sbjct: 149 VMMLKSGDDDDEIEDYSQHLAYRMVKRFFPIWPKLRGHAFLLNQKEVDAELAKPENSDVT 208
Query: 266 -GMRK-----ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSL 319
G K ATPL L VAV+ELSD+ FA DS+PA+ V+R+P IV+S+ +FAILGLR+L
Sbjct: 209 IGRGKKAALYATPLFLCVAVVELSDVMFAFDSVPAIIAVSREPLIVYSAMMFAILGLRTL 268
Query: 320 F 320
+
Sbjct: 269 Y 269
>sp|P18780|TERC_ALCSP Tellurium resistance protein TerC OS=Alcaligenes sp. GN=terC PE=3
SV=1
Length = 346
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 131/241 (54%), Gaps = 34/241 (14%)
Query: 111 RESYTSSVKTVA----FCVSTAVAFGLGVGFI---EGASKASEFFAGYILEQSLSVDNLF 163
R S+K+ A F V A+AF GF+ GA AS F GY LE+ LSVDNLF
Sbjct: 32 RHDKPISLKSAALWSVFWVVVAMAFA---GFLYVHHGAEVASLFVTGYALEKVLSVDNLF 88
Query: 164 VFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSS 223
V + IF +F VP Y++R L +GI GAIVFR + +GT L V L+ A ++ +++
Sbjct: 89 VMMAIFSWFSVPDRYRHRGLYWGIIGAIVFRGIFVAIGTGLLSLGPYVELIFAVVVAWTA 148
Query: 224 FKLFASEEDDTDLSD---NFIVKTCQRFIPVTTYYDGNRFFTNQD--------------- 265
+ DD ++ D + + +RF P+ G+ F Q
Sbjct: 149 VMMLKGGGDDDEIEDYSQHLAYRLVKRFFPIWPKLSGHAFLLTQKEVDAELAKPENKDVS 208
Query: 266 -GMRK-----ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSL 319
G K ATPL+L VAV+ELSD+ FA DS+PA+ V+R+P IV+S+ +FAILGLR+L
Sbjct: 209 VGRLKKAALYATPLMLCVAVVELSDVMFAFDSVPAIIAVSREPLIVYSAMMFAILGLRTL 268
Query: 320 F 320
+
Sbjct: 269 Y 269
>sp|P0A615|Y2742_MYCBO Uncharacterized membrane protein Mb2742 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2742 PE=3 SV=1
Length = 397
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Query: 125 VSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLS 184
V A+ FG+ V G+ A E+FA Y+ +++LSVDNLFVF++I F VP + Q +VL
Sbjct: 46 VGIAILFGIAVVVFGGSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLL 105
Query: 185 YGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFA----SEEDDTDLSDNF 240
+GIA A+V R I +G A ++ F + + +LL + L D L +
Sbjct: 106 FGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETLKRSV 165
Query: 241 IVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTR 300
I++ RF+ + Y+G+R FT + R TPLLL + + +DI FA DSIPA+FG+T+
Sbjct: 166 IIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQ 225
Query: 301 DPFIVFSSNLFAILGLRSLFTLISEGMADLEYL 333
+ ++VF++ F++LGLR L+ LI + L YL
Sbjct: 226 NVYLVFAATAFSLLGLRQLYFLIDGLLDRLVYL 258
>sp|P0A614|Y2723_MYCTU Uncharacterized membrane protein Rv2723/MT2795 OS=Mycobacterium
tuberculosis GN=Rv2723 PE=3 SV=1
Length = 397
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Query: 125 VSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLS 184
V A+ FG+ V G+ A E+FA Y+ +++LSVDNLFVF++I F VP + Q +VL
Sbjct: 46 VGIAILFGIAVVVFGGSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLL 105
Query: 185 YGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFA----SEEDDTDLSDNF 240
+GIA A+V R I +G A ++ F + + +LL + L D L +
Sbjct: 106 FGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETLKRSV 165
Query: 241 IVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTR 300
I++ RF+ + Y+G+R FT + R TPLLL + + +DI FA DSIPA+FG+T+
Sbjct: 166 IIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQ 225
Query: 301 DPFIVFSSNLFAILGLRSLFTLISEGMADLEYL 333
+ ++VF++ F++LGLR L+ LI + L YL
Sbjct: 226 NVYLVFAATAFSLLGLRQLYFLIDGLLDRLVYL 258
>sp|Q89AT3|Y156_BUCBP Uncharacterized membrane protein bbp_156 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_156 PE=3
SV=1
Length = 321
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 119/183 (65%), Gaps = 2/183 (1%)
Query: 147 FFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQ 206
F +GY+LEQSLS+DN+ ++ +F+ F + +++Q +L YG A+VFR S+I G L
Sbjct: 80 FISGYLLEQSLSMDNVAMWFFLFQLFSISMVHQRVILFYGTFLALVFRSSIIFFGVWLLS 139
Query: 207 RFEAVNLVLAGILLFSSFKLFASE--EDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQ 264
++ + VL+ ILLF+ S TD+ + FI+ + +T + N FFT +
Sbjct: 140 KWSFLFYVLSIILLFTGIITILSNGVNKKTDVQNTFIMSWIYKKFRITKNFSKNNFFTKE 199
Query: 265 DGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTLIS 324
+G+ ATPL L + +IEL+DI F++DSIPA+F +T+DPFI+ +S+ F+I+GLRS++ +++
Sbjct: 200 NGVIVATPLFLVLILIELNDIIFSIDSIPAIFLITKDPFIIITSSFFSIIGLRSIYVILA 259
Query: 325 EGM 327
+
Sbjct: 260 NSI 262
>sp|Q68VW2|Y774_RICTY Uncharacterized membrane protein RT0774 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0774 PE=3 SV=1
Length = 302
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 135/222 (60%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
++ SSV F + FG+ + G A E++ +++E+++++DN+F+ +IF++F
Sbjct: 29 AFKSSVFLSLFYFIISCLFGIYIYHNMGLDHAREYYTCFLIEKAMALDNIFIISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
K+P YQ+RVL +GI G I+F+ +I G + +F + + A IL+ + K F
Sbjct: 89 KIPTTYQHRVLFFGIIGVIIFKAIIIYGGIMLIHKFSWLLYIFAVILIATGIKTFNVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ +++I K+ + + +T +G++F ++ +PL +++ +IE D+ FA+DSI
Sbjct: 149 TYDIQNSYIYKSIIKNLNITHNLEGHKFVIKRNNKLYFSPLFVSLILIETIDVVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQ 334
A+F +T D +I+++SN+FAILGLRSLF +SE + Y++
Sbjct: 209 AAIFAITNDVYIIYTSNIFAILGLRSLFFCLSEIVERFSYIK 250
>sp|O05976|Y786_RICPR Uncharacterized membrane protein RP786 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP786 PE=3 SV=1
Length = 297
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 132/222 (59%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ S+ F + FG+ V G A E++ +++E+++++DN+F+ +IF++F
Sbjct: 29 SFKGSILLSLFYFIISCLFGIYVYHNMGLDHAREYYTCFLIEKAMALDNIFIISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
+P YQ+RVL +GI G I+F+ +I G + +F + +LA IL+ + K F
Sbjct: 89 NIPSTYQHRVLFFGIIGVIIFKAIIIYGGIMLIHKFSWLLYILAVILIATGIKTFNVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ +++I K+ + + +T +G +F ++ + L +++ +IE D+ FA+DSI
Sbjct: 149 TYDIQNSYIYKSIIKNLNITHDLEGQKFVIKRNNKLYFSTLFVSLILIETIDLVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQ 334
A+F +T D +I+++SN+FAILGLRSLF +SE + Y++
Sbjct: 209 AAIFAITNDVYIIYTSNIFAILGLRSLFFCLSEIVERFSYIK 250
>sp|Q8K9X4|Y160_BUCAP Uncharacterized membrane protein BUsg_160 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_160 PE=3
SV=1
Length = 310
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 1/179 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
K F Y LE LS+DN+F + IFK K+P++YQ +VL YG+ GA++ R G+
Sbjct: 68 KIIYFLTSYFLEILLSIDNVFAWFFIFKSLKIPLIYQKKVLLYGLWGALILRSIFSFSGS 127
Query: 203 ATLQRFEAVNLVLAGILLFSSFK-LFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFF 261
++ + + G + +S K +F S + + +N +F VT + FF
Sbjct: 128 FLFSKWHWILYLFGGFFILTSLKFIFFSNLECDNKEENIKKLWIYKFFRVTENINNENFF 187
Query: 262 TNQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLF 320
+ TPL +++ +IELSDI F+VDSIPA V D FI+FSSN FA+LGLRS++
Sbjct: 188 VKIEKKIFITPLFVSLILIELSDIVFSVDSIPAALSVNNDLFIIFSSNFFAVLGLRSMY 246
>sp|O34447|YCEF_BACSU Uncharacterized membrane protein YceF OS=Bacillus subtilis (strain
168) GN=yceF PE=3 SV=1
Length = 257
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 152 ILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAV 211
+LE LS DN V ++ K+ +P + + L+YG+ GA +FR I LG L +F +
Sbjct: 38 VLEGLLSADNALVLAVMVKH--LPEKQRKKALTYGLFGAYIFRFIFIGLGM-LLIKFWWI 94
Query: 212 NLVLAGILLFSSFKLF----ASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGM 267
++ A L + K F EE D ++++V+T F
Sbjct: 95 KVLGALYLAWLVIKHFWIGEKEEEADGMKKNSWMVRTFGIFWA----------------- 137
Query: 268 RKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRS---LFTLIS 324
TV +EL D+AF+VDSI A F V+ +++ + IL +R+ +F ++
Sbjct: 138 --------TVISVELMDLAFSVDSILAAFAVSEKVWVLLIGGMLGILMMRTVAKVFLVLI 189
Query: 325 EGMADLE 331
+ + +LE
Sbjct: 190 DKIPELE 196
>sp|Q6BMD6|M28P1_DEBHA Probable zinc metalloprotease DEHA2F06380g OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2F06380g PE=3 SV=2
Length = 1016
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 226 LFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDI 285
LF ++D + ++N I KT TYY+ N +G + P LL A
Sbjct: 138 LFIECDNDVNYTNNIIFKTENDLYNQVTYYESNNLLVRINGSDSSLPALLVSA------- 190
Query: 286 AFAVDSIPAVFGVTRD 301
DS+P+ FGVT D
Sbjct: 191 --HFDSVPSSFGVTDD 204
>sp|O34997|YKOY_BACSU Uncharacterized membrane protein YkoY OS=Bacillus subtilis (strain
168) GN=ykoY PE=3 SV=1
Length = 324
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 60/146 (41%), Gaps = 37/146 (25%)
Query: 153 LEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVN 212
LE L+ DN V ++ K+ +P + + L YG+AGA V R L + L V
Sbjct: 79 LEGILAADNALVMAVMVKH--LPEEKRKKALFYGLAGAFVLRFG-SLFAISFLVNVWQVQ 135
Query: 213 LVLAGILLFSS----FKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMR 268
+ A LL+ S K + +++DT T Q G
Sbjct: 136 AIGAIYLLYISASHLLKRYVFKKEDTHKE------------------------TKQSGFW 171
Query: 269 KATPLLLTVAVIELSDIAFAVDSIPA 294
TV +EL+DIAFAVDSI A
Sbjct: 172 P------TVLKVELADIAFAVDSILA 191
>sp|Q9C691|DEGP6_ARATH Putative protease Do-like 6, chloroplastic OS=Arabidopsis thaliana
GN=DEGP6 PE=3 SV=2
Length = 219
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 258 NRFFTNQDGMRKATPL---LLTVAVIELSDIAFAVDSIPAVFGVTRDPFIV--------- 305
+RFF + +R+ + L++ +SD+ A D++ +F +R+P +V
Sbjct: 22 HRFFYSPSLLRRRSSFNASLISRCCSSVSDVDVARDAVVKIFSFSREPNVVQPWQTTEKE 81
Query: 306 FSSNLFAILGLRSLFTLISEGMADLEYLQVKVY 338
+SS+ FAI G R L + + D YLQV+ +
Sbjct: 82 YSSSGFAISGRRILTN--AHVVGDHLYLQVRKH 112
>sp|Q3E8B4|DGP15_ARATH Putative Do-like 15 protein OS=Arabidopsis thaliana GN=DEGP15 PE=3
SV=1
Length = 198
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 282 LSDIAFAVDSIPAVFGVTRDPFIV---------FSSNLFAILGLRSLFTLISEGMADLEY 332
L DI A DS+ +F +R+P +V +SS+ FAI G R L + + D Y
Sbjct: 36 LRDIDLAQDSVVKIFSFSREPNVVQPWQTTEKEYSSSGFAISGRRILTN--AHVVGDHSY 93
Query: 333 LQVKVY 338
LQV+ +
Sbjct: 94 LQVRKH 99
>sp|Q2RFN9|RPOB_MOOTA DNA-directed RNA polymerase subunit beta OS=Moorella thermoacetica
(strain ATCC 39073) GN=rpoB PE=3 SV=1
Length = 1141
Score = 32.7 bits (73), Expect = 3.6, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 228 ASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVI 280
AS+ D D+S +V IP + D NR + R+A PLL T A I
Sbjct: 525 ASQVDYMDVSPKQMVSVATALIPFLEHDDANRALMGANMQRQAVPLLRTEAPI 577
>sp|A6TWJ0|RPOB_ALKMQ DNA-directed RNA polymerase subunit beta OS=Alkaliphilus
metalliredigens (strain QYMF) GN=rpoB PE=3 SV=1
Length = 1246
Score = 32.7 bits (73), Expect = 3.6, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 32/76 (42%)
Query: 230 EEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAV 289
E D D+S +V IP D NR + R+A PLL+T A I + + +
Sbjct: 628 EVDYMDVSPKQVVSVATAMIPFLENDDANRALMGSNMQRQAVPLLITDAPIIGTGMEYKA 687
Query: 290 DSIPAVFGVTRDPFIV 305
V V R+ IV
Sbjct: 688 AKDSGVVVVARNSGIV 703
>sp|A8MLD2|RPOB_ALKOO DNA-directed RNA polymerase subunit beta OS=Alkaliphilus oremlandii
(strain OhILAs) GN=rpoB PE=3 SV=1
Length = 1241
Score = 32.7 bits (73), Expect = 3.7, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 228 ASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVI 280
A+E D D+S +V IP D NR + R+A PLL+T A I
Sbjct: 627 ANEVDYMDVSPKQVVSVATAMIPFLENDDANRALMGANMQRQAVPLLITDAPI 679
>sp|Q8KG15|RPOB_CHLTE DNA-directed RNA polymerase subunit beta OS=Chlorobium tepidum
(strain ATCC 49652 / DSM 12025 / TLS) GN=rpoB PE=3 SV=1
Length = 1303
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 226 LFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVI 280
+ A E + D+S IV IP + DGNR + R+A PLL++ A I
Sbjct: 633 VLAEEVNYMDVSPVQIVSAAAALIPFLEHDDGNRALMGANMQRQAVPLLVSEAPI 687
>sp|P53109|AIM14_YEAST Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AIM14 PE=1 SV=1
Length = 570
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAFCVSTA 128
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F +A
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSMIEVKSKHSFTLSNELKSFNNESA 531
>sp|B3LHL3|AIM14_YEAS1 Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=AIM14 PE=3 SV=1
Length = 570
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAFCVSTA 128
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F +A
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSLIEVKSKHSFTLSSELKSFNNESA 531
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,510,537
Number of Sequences: 539616
Number of extensions: 4395579
Number of successful extensions: 12500
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 12435
Number of HSP's gapped (non-prelim): 68
length of query: 345
length of database: 191,569,459
effective HSP length: 118
effective length of query: 227
effective length of database: 127,894,771
effective search space: 29032113017
effective search space used: 29032113017
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)