Query 019160
Match_columns 345
No_of_seqs 194 out of 1217
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 07:11:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019160.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019160hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02216 protein SRG1 100.0 1.7E-71 3.6E-76 533.8 29.4 294 42-339 51-357 (357)
2 PLN02758 oxidoreductase, 2OG-F 100.0 3.7E-71 8.1E-76 532.2 29.8 285 40-324 49-346 (361)
3 PLN02276 gibberellin 20-oxidas 100.0 1.5E-70 3.3E-75 528.3 30.1 282 42-323 39-338 (361)
4 PLN02515 naringenin,2-oxogluta 100.0 3.9E-70 8.4E-75 523.8 31.1 282 40-322 34-327 (358)
5 PTZ00273 oxidase reductase; Pr 100.0 3.1E-70 6.6E-75 519.6 29.6 285 40-325 2-312 (320)
6 PLN02947 oxidoreductase 100.0 2.5E-70 5.5E-75 527.5 29.3 295 40-339 63-371 (374)
7 PLN03178 leucoanthocyanidin di 100.0 3.4E-70 7.4E-75 525.9 29.1 284 40-323 44-344 (360)
8 PLN02393 leucoanthocyanidin di 100.0 6.1E-70 1.3E-74 524.2 29.3 285 39-323 47-346 (362)
9 PLN02912 oxidoreductase, 2OG-F 100.0 1E-69 2.2E-74 519.8 29.8 293 42-339 40-345 (348)
10 PLN02904 oxidoreductase 100.0 1.1E-69 2.3E-74 521.0 29.5 280 41-323 49-340 (357)
11 PLN02984 oxidoreductase, 2OG-F 100.0 1.1E-69 2.3E-74 517.2 29.2 286 41-340 36-340 (341)
12 PLN02254 gibberellin 3-beta-di 100.0 8.1E-70 1.8E-74 521.6 28.2 274 42-324 55-344 (358)
13 PLN02750 oxidoreductase, 2OG-F 100.0 1.1E-69 2.4E-74 519.9 28.6 280 41-324 24-328 (345)
14 PLN02997 flavonol synthase 100.0 3.2E-69 6.9E-74 511.6 30.2 275 41-323 30-315 (325)
15 PLN02299 1-aminocyclopropane-1 100.0 3.3E-69 7.2E-74 511.0 27.9 291 42-339 5-308 (321)
16 PLN00417 oxidoreductase, 2OG-F 100.0 1.3E-68 2.9E-73 512.1 32.1 277 39-316 40-329 (348)
17 PLN02639 oxidoreductase, 2OG-F 100.0 4.5E-69 9.7E-74 514.2 28.7 278 40-323 34-323 (337)
18 PLN03002 oxidoreductase, 2OG-F 100.0 9.5E-69 2.1E-73 510.7 30.2 285 35-326 6-322 (332)
19 PLN02485 oxidoreductase 100.0 2.7E-68 5.8E-73 507.9 29.7 284 42-325 6-326 (329)
20 COG3491 PcbC Isopenicillin N s 100.0 4.3E-68 9.3E-73 482.4 27.0 262 41-302 3-280 (322)
21 KOG0143 Iron/ascorbate family 100.0 1.5E-67 3.3E-72 498.4 29.7 285 39-324 13-310 (322)
22 PLN02156 gibberellin 2-beta-di 100.0 1.2E-67 2.7E-72 501.9 28.8 274 41-324 24-314 (335)
23 PLN02704 flavonol synthase 100.0 9.8E-68 2.1E-72 504.6 28.1 277 41-323 40-331 (335)
24 PLN02365 2-oxoglutarate-depend 100.0 5.3E-67 1.1E-71 492.4 28.3 269 39-323 1-284 (300)
25 PLN02403 aminocyclopropanecarb 100.0 6.3E-67 1.4E-71 491.1 27.4 292 43-343 2-300 (303)
26 PLN03001 oxidoreductase, 2OG-F 100.0 2E-56 4.2E-61 411.9 22.3 232 92-323 1-248 (262)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 7.8E-25 1.7E-29 172.5 8.0 95 197-294 2-98 (98)
28 PF14226 DIOX_N: non-haem diox 99.9 4E-22 8.6E-27 161.9 6.7 93 44-140 1-95 (116)
29 PLN03176 flavanone-3-hydroxyla 99.8 5.4E-19 1.2E-23 144.0 11.8 80 41-121 35-115 (120)
30 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.4 0.0028 6E-08 49.4 3.2 78 199-293 1-100 (100)
31 smart00702 P4Hc Prolyl 4-hydro 95.9 0.12 2.5E-06 44.7 11.3 104 169-293 60-178 (178)
32 PRK05467 Fe(II)-dependent oxyg 95.3 0.21 4.6E-06 45.2 10.7 49 233-293 129-177 (226)
33 PF12851 Tet_JBP: Oxygenase do 93.5 1.2 2.7E-05 38.4 11.0 68 214-293 85-170 (171)
34 PF13532 2OG-FeII_Oxy_2: 2OG-F 72.3 9.9 0.00021 32.9 5.9 78 197-290 97-193 (194)
35 PF07350 DUF1479: Protein of u 69.9 4 8.6E-05 40.2 3.0 53 42-101 48-100 (416)
36 TIGR02466 conserved hypothetic 66.2 70 0.0015 28.4 9.9 39 242-292 159-198 (201)
37 PF13759 2OG-FeII_Oxy_5: Putat 64.2 11 0.00024 29.2 4.0 37 242-290 63-100 (101)
38 PRK15401 alpha-ketoglutarate-d 62.0 1.2E+02 0.0026 27.2 11.2 77 198-290 117-210 (213)
39 PRK08130 putative aldolase; Va 53.4 19 0.00042 32.0 4.2 37 42-84 126-162 (213)
40 PRK08333 L-fuculose phosphate 52.7 17 0.00038 31.5 3.7 37 42-84 119-155 (184)
41 PLN00052 prolyl 4-hydroxylase; 46.9 2.6E+02 0.0057 26.6 11.1 47 245-295 206-253 (310)
42 COG2140 Thermophilic glucose-6 46.1 44 0.00095 29.8 5.1 67 196-267 89-158 (209)
43 TIGR02410 carnitine_TMLD trime 44.3 34 0.00073 33.2 4.6 48 42-93 99-146 (362)
44 TIGR02409 carnitine_bodg gamma 43.3 25 0.00055 34.0 3.5 47 41-92 107-153 (366)
45 TIGR00568 alkb DNA alkylation 41.3 1.7E+02 0.0036 25.2 7.9 58 198-261 96-162 (169)
46 PF06820 Phage_fiber_C: Putati 40.2 26 0.00056 24.5 2.1 37 212-248 14-61 (64)
47 PRK05874 L-fuculose-phosphate 38.3 39 0.00084 30.3 3.7 36 43-84 127-162 (217)
48 cd00491 4Oxalocrotonate_Tautom 34.0 54 0.0012 22.1 3.1 29 45-73 1-29 (58)
49 PRK06833 L-fuculose phosphate 33.4 55 0.0012 29.1 3.8 36 43-84 124-159 (214)
50 PRK06755 hypothetical protein; 33.4 43 0.00093 29.9 3.1 36 43-84 136-171 (209)
51 PF05118 Asp_Arg_Hydrox: Aspar 32.5 89 0.0019 26.5 4.9 59 216-290 93-157 (163)
52 cd00379 Ribosomal_L10_P0 Ribos 32.4 1.1E+02 0.0023 25.4 5.3 39 60-98 3-42 (155)
53 PRK08087 L-fuculose phosphate 32.3 56 0.0012 29.1 3.7 36 43-84 122-157 (215)
54 PRK00048 dihydrodipicolinate r 32.0 23 0.0005 32.5 1.2 84 11-100 52-135 (257)
55 PF00596 Aldolase_II: Class II 30.8 27 0.00059 30.0 1.4 37 42-84 122-159 (184)
56 PRK08660 L-fuculose phosphate 30.2 63 0.0014 27.9 3.6 36 42-84 114-149 (181)
57 PRK02289 4-oxalocrotonate taut 29.8 73 0.0016 22.0 3.2 29 45-73 2-30 (60)
58 PF09243 Rsm22: Mitochondrial 28.5 1.7E+02 0.0036 27.2 6.3 91 3-100 64-156 (274)
59 PRK03634 rhamnulose-1-phosphat 28.2 64 0.0014 30.0 3.5 36 43-84 179-214 (274)
60 cd05797 Ribosomal_L10 Ribosoma 27.9 1.9E+02 0.004 24.2 6.0 41 58-98 3-44 (157)
61 TIGR02624 rhamnu_1P_ald rhamnu 27.2 99 0.0022 28.7 4.5 36 43-84 177-212 (270)
62 TIGR01086 fucA L-fuculose phos 27.0 72 0.0016 28.4 3.5 36 43-84 121-156 (214)
63 PRK02220 4-oxalocrotonate taut 26.9 86 0.0019 21.4 3.2 29 45-73 2-30 (61)
64 PRK06661 hypothetical protein; 26.8 76 0.0017 28.7 3.6 71 10-84 77-160 (231)
65 TIGR01921 DAP-DH diaminopimela 26.2 71 0.0015 30.6 3.4 72 12-87 53-124 (324)
66 PF01361 Tautomerase: Tautomer 26.2 61 0.0013 22.1 2.3 29 45-73 1-29 (60)
67 PRK06557 L-ribulose-5-phosphat 26.2 69 0.0015 28.6 3.2 37 42-84 129-167 (221)
68 cd05796 Ribosomal_P0_like Ribo 26.1 1.2E+02 0.0027 25.7 4.6 40 59-98 2-42 (163)
69 TIGR00013 taut 4-oxalocrotonat 25.5 91 0.002 21.4 3.1 28 45-72 1-29 (63)
70 PF03668 ATP_bind_2: P-loop AT 25.3 88 0.0019 29.4 3.8 30 66-97 16-45 (284)
71 PRK00745 4-oxalocrotonate taut 24.5 1E+02 0.0022 21.1 3.2 29 45-73 2-30 (62)
72 PRK06357 hypothetical protein; 24.4 1E+02 0.0022 27.5 4.0 36 43-84 130-171 (216)
73 PRK00099 rplJ 50S ribosomal pr 24.3 2.4E+02 0.0051 24.0 6.1 41 58-98 4-45 (172)
74 PRK05834 hypothetical protein; 23.6 93 0.002 27.3 3.5 38 43-84 121-160 (194)
75 PF00466 Ribosomal_L10: Riboso 23.4 3.3E+02 0.0072 20.5 6.4 42 58-99 4-46 (100)
76 PRK04019 rplP0 acidic ribosoma 22.9 2E+02 0.0043 27.5 5.8 42 57-98 5-47 (330)
77 PF11043 DUF2856: Protein of u 22.5 1.1E+02 0.0023 22.9 3.0 24 86-109 20-43 (97)
78 KOG0256 1-aminocyclopropane-1- 22.4 2.2E+02 0.0049 28.2 5.9 55 47-101 393-460 (471)
79 TIGR00036 dapB dihydrodipicoli 22.4 50 0.0011 30.5 1.6 84 11-100 60-145 (266)
80 cd05795 Ribosomal_P0_L10e Ribo 22.3 1.8E+02 0.0039 25.0 4.9 40 59-98 2-42 (175)
81 cd00398 Aldolase_II Class II A 22.1 80 0.0017 27.8 2.8 39 42-84 121-159 (209)
82 PF11243 DUF3045: Protein of u 21.7 70 0.0015 23.8 1.9 21 65-85 36-56 (89)
83 PF01408 GFO_IDH_MocA: Oxidore 21.2 7.7 0.00017 30.5 -3.7 69 9-82 50-120 (120)
84 PRK08193 araD L-ribulose-5-pho 20.9 1.3E+02 0.0027 27.2 3.9 42 43-84 124-172 (231)
85 COG3128 PiuC Uncharacterized i 20.9 4E+02 0.0086 23.6 6.6 21 273-293 160-180 (229)
86 COG3384 Aromatic ring-opening 20.4 2.2E+02 0.0047 26.5 5.2 77 5-83 90-170 (268)
87 PF10411 DsbC_N: Disulfide bon 20.3 3E+02 0.0064 18.8 5.1 38 228-267 17-56 (57)
88 PRK15331 chaperone protein Sic 20.3 1.1E+02 0.0023 26.4 3.0 43 59-102 8-50 (165)
89 TIGR03328 salvage_mtnB methylt 20.2 1.3E+02 0.0029 26.1 3.8 35 43-84 126-163 (193)
No 1
>PLN02216 protein SRG1
Probab=100.00 E-value=1.7e-71 Score=533.82 Aligned_cols=294 Identities=29% Similarity=0.542 Sum_probs=250.0
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCC-cccC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNNS-YRWG 120 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~~-~~~g 120 (345)
.+||+|||+.+.+++. +.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....+. .||+
T Consensus 51 ~~iPvIDls~~~~~~~--~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~ 128 (357)
T PLN02216 51 SEIPIIDMKRLCSSTA--MDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFG 128 (357)
T ss_pred CCCCeEEChhccCCcc--HHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccC
Confidence 4799999999876553 335788999999999999999999999999999999999999999999998544333 3555
Q ss_pred CCCC-CCCCCCCcccccCCCCC--CCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccc-c
Q 019160 121 TPTA-TCPKQFSWSEAFHIPLT--KISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICNE-S 195 (345)
Q Consensus 121 ~~~~-~~~~~~d~~E~~~~~~~--~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~-~ 195 (345)
.... ...+..||+|.|.+... .....+.||. +++||+.+++|+++|.+|+.+||++||++||+++++|.+.+.. .
T Consensus 129 ~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~ 208 (357)
T PLN02216 129 QAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDL 208 (357)
T ss_pred ccccccccccCCceeeeeeeccCcccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCc
Confidence 4432 22345799999876321 1223456985 7899999999999999999999999999999999999887765 4
Q ss_pred ccceeeeecCCCCCCcccCCCCCcccCCcEEEEee-CCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcccCcc
Q 019160 196 TCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQ-DQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVE 274 (345)
Q Consensus 196 ~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~q-d~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~ 274 (345)
.+.||++|||+|+.++..+|+++|||+|+||||+| ++++||||+++|+|++|+|.||++|||+||+||+||||+|+|++
T Consensus 209 ~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~ 288 (357)
T PLN02216 209 GQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIE 288 (357)
T ss_pred hheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccC
Confidence 56899999999998888899999999999999999 57999999999999999999999999999999999999999999
Q ss_pred ceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHHHHHhhCCccCCCceee
Q 019160 275 HKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQEDVKQTGHKVGLPRFLQ 339 (345)
Q Consensus 275 HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~ 339 (345)
|||+.++.++||||+||+.|+.|++|.|. ++|++|++++++||++.+... ....+..++.|+|
T Consensus 289 HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~--~~~~~~~~~~~~~ 357 (357)
T PLN02216 289 HRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSR--ELDGKAYLDAMRI 357 (357)
T ss_pred ceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHHHHHhc--ccCCcchhhhhcC
Confidence 99998888899999999999999999983 478999999999999876642 2223444555543
No 2
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.7e-71 Score=532.16 Aligned_cols=285 Identities=30% Similarity=0.576 Sum_probs=250.6
Q ss_pred CCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC-Ccc
Q 019160 40 EECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNN-SYR 118 (345)
Q Consensus 40 ~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~ 118 (345)
...+||+|||+.+.+++.+++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....+ ..|
T Consensus 49 ~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G 128 (361)
T PLN02758 49 APDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQG 128 (361)
T ss_pred CCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCccc
Confidence 3457999999999877777777889999999999999999999999999999999999999999999999854333 235
Q ss_pred cCCCCC-CCCCCCCcccccCCCCCC--CCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccc
Q 019160 119 WGTPTA-TCPKQFSWSEAFHIPLTK--ISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICNE 194 (345)
Q Consensus 119 ~g~~~~-~~~~~~d~~E~~~~~~~~--~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 194 (345)
|+.... ......||+|.|.+.... ....+.||. +++||+.+++|+++|.+|+.+|+++|+++||+++++|.+.+..
T Consensus 129 Y~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 208 (361)
T PLN02758 129 YGQAFVFSEDQKLDWCNMFALGVEPHFIRNPKLWPTKPARFSETLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMFGE 208 (361)
T ss_pred cCcccccccccccCeeEEEEeeccCccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHhcC
Confidence 654332 123447999988774321 123456985 6899999999999999999999999999999999999988877
Q ss_pred cccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCC--CCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcccC
Q 019160 195 STCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQ--VGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKS 272 (345)
Q Consensus 195 ~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~--~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S 272 (345)
..+.||++|||+|+.++..+|+++|||+|+||||+||+ ++||||+++|+|++|+|.||++|||+||+||+||||+|+|
T Consensus 209 ~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS 288 (361)
T PLN02758 209 AVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKS 288 (361)
T ss_pred ccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCCCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeec
Confidence 88899999999998888889999999999999999984 8899999999999999999999999999999999999999
Q ss_pred ccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHHH
Q 019160 273 VEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQED 324 (345)
Q Consensus 273 ~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~~ 324 (345)
++|||+.++.++|||++||++|+.|++|.|. ++|++|++++++||+..+...
T Consensus 289 ~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~ 346 (361)
T PLN02758 289 VEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYNHGEYSRHYVTS 346 (361)
T ss_pred ccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCcCCCccHHHHHHHHHhc
Confidence 9999999888899999999999999999983 478999999999999977653
No 3
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=1.5e-70 Score=528.27 Aligned_cols=282 Identities=35% Similarity=0.578 Sum_probs=247.9
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC-CCcccC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLN-NSYRWG 120 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~-~~~~~g 120 (345)
.+||+|||+.+.++++++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ...||+
T Consensus 39 ~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY~ 118 (361)
T PLN02276 39 LAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGYA 118 (361)
T ss_pred CCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccccC
Confidence 6799999999988788888899999999999999999999999999999999999999999999999985433 233554
Q ss_pred CCCCC-CCCCCCcccccCCCCCCC---------CCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccc
Q 019160 121 TPTAT-CPKQFSWSEAFHIPLTKI---------SDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLD 189 (345)
Q Consensus 121 ~~~~~-~~~~~d~~E~~~~~~~~~---------~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 189 (345)
..... .....||+|.|.+..... ...+.||. .++||+.+++|+..|.+++.+||++||++||+++++|.
T Consensus 119 ~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 198 (361)
T PLN02276 119 SSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLKIMELLGISLGVDRGYYR 198 (361)
T ss_pred ccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 43221 223479999998732110 01134664 57899999999999999999999999999999999999
Q ss_pred ccccccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCc
Q 019160 190 DICNESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDV 269 (345)
Q Consensus 190 ~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~ 269 (345)
+.+..+.+.||++|||+++.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.+|++|||+||+|++||||+
T Consensus 199 ~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~TNG~ 278 (361)
T PLN02276 199 KFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVFVDNKWRSVRPRPGALVVNIGDTFMALSNGR 278 (361)
T ss_pred HHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEEECCEEEEcCCCCCeEEEEcHHHHHHHhCCc
Confidence 88877788999999999988778899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHH
Q 019160 270 YKSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQE 323 (345)
Q Consensus 270 ~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~ 323 (345)
|+|++|||+.++..+||||+||++|+.|++|.|. ++|.+|++++++||++....
T Consensus 279 ~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~ 338 (361)
T PLN02276 279 YKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQK 338 (361)
T ss_pred cccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHH
Confidence 9999999999888999999999999999999982 47899999999999986543
No 4
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=3.9e-70 Score=523.83 Aligned_cols=282 Identities=28% Similarity=0.455 Sum_probs=242.6
Q ss_pred CCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCC-cc
Q 019160 40 EECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNNS-YR 118 (345)
Q Consensus 40 ~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~~-~~ 118 (345)
...+||||||+.+..++ .+|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++...... .|
T Consensus 34 ~~~~iPvIDls~~~~~~-~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G 112 (358)
T PLN02515 34 FSDEIPVISLAGIDEVG-GRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGG 112 (358)
T ss_pred cCCCCCEEEChhccCCc-hHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhCcCCCCccC
Confidence 34579999999987544 56778899999999999999999999999999999999999999999999998543322 24
Q ss_pred cCCC-CCCCCCCCCcccccCCCCCC--CCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccc
Q 019160 119 WGTP-TATCPKQFSWSEAFHIPLTK--ISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICNE 194 (345)
Q Consensus 119 ~g~~-~~~~~~~~d~~E~~~~~~~~--~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 194 (345)
|... ........||+|.|.+.... ....+.||+ +++||+.+++|++.|.+|+.+|+++|+++||+++++|.+.+..
T Consensus 113 y~~~~~~~~~~~~d~kE~~~~~~~~~~~~~~n~WP~~~~~fr~~~~~y~~~~~~L~~~ll~~la~~Lgl~~~~f~~~~~~ 192 (358)
T PLN02515 113 FIVSSHLQGEAVQDWREIVTYFSYPVRTRDYSRWPDKPEGWRAVTEEYSEKLMGLACKLLEVLSEAMGLEKEALTKACVD 192 (358)
T ss_pred cccccccccccccCceeeeccccCcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHhhcC
Confidence 4211 11223457999988653211 112356985 7899999999999999999999999999999999999887777
Q ss_pred cccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeC-C-eEEEecCCCCcEEEEccccchhhcCCcccC
Q 019160 195 STCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKD-S-KWVAVRPNPDALIVNIGDLFQAWSNDVYKS 272 (345)
Q Consensus 195 ~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~-g-~W~~V~p~~g~liVnvGd~L~~~TnG~~~S 272 (345)
..+.+|++|||+++.++..+|+++|||+|+||||+||+++||||+.+ | +|++|+|.||++|||+||+||+||||+|+|
T Consensus 193 ~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kS 272 (358)
T PLN02515 193 MDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKN 272 (358)
T ss_pred ccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECCCCeEEECCCCCCeEEEEccHHHHHHhCCeeee
Confidence 77889999999998777889999999999999999999999999854 3 799999999999999999999999999999
Q ss_pred ccceeecCCCCceEEEEEeeCCCCCCeeeCC-----CCCCCCCcccHHHHHHHHH
Q 019160 273 VEHKVMANGKMERYSVAYFLCPSYDSSIGSC-----TEPSTYRKFTFEEYRKQVQ 322 (345)
Q Consensus 273 ~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~-----~~p~~y~~~~~~ey~~~~~ 322 (345)
++|||+.++..+||||+||++|+.|++|.|. ++|++|++++++||+..+.
T Consensus 273 t~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~~~~~~~p~~y~~~t~~eyl~~~~ 327 (358)
T PLN02515 273 ADHQAVVNSNCSRLSIATFQNPAPDATVYPLKVREGEKPILEEPITFAEMYRRKM 327 (358)
T ss_pred ecceEECCCCCCEEEEEEEecCCCCCEEECCCcCCCCCCCcCCCcCHHHHHHHHH
Confidence 9999998888899999999999999999983 3688999999999988764
No 5
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=3.1e-70 Score=519.63 Aligned_cols=285 Identities=28% Similarity=0.456 Sum_probs=247.9
Q ss_pred CCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC--CCc
Q 019160 40 EECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLN--NSY 117 (345)
Q Consensus 40 ~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~ 117 (345)
..++||||||+.+.++++.++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ...
T Consensus 2 ~~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~ 81 (320)
T PTZ00273 2 TRASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHR 81 (320)
T ss_pred CCCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCC
Confidence 456899999999988888888899999999999999999999999999999999999999999999999984332 223
Q ss_pred ccCCCCC---CCCCCCCcccccCCCC----CCC--------CCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019160 118 RWGTPTA---TCPKQFSWSEAFHIPL----TKI--------SDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENL 181 (345)
Q Consensus 118 ~~g~~~~---~~~~~~d~~E~~~~~~----~~~--------~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~L 181 (345)
||+.... ......||+|.|.+.. ... ...|.||. +|+||+.+++|+++|.+++.+|+++||++|
T Consensus 82 GY~~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~L 161 (320)
T PTZ00273 82 GYGAFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPTQVEGWMELMETHYRDMQALALVLLRALALAI 161 (320)
T ss_pred CCCCccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4543322 1234579999998742 111 12466985 789999999999999999999999999999
Q ss_pred CCCCccccccccccccceeeeecCCCCCC-cccCCCCCcccCCcEEEEeeCCCCceEEE-eCCeEEEecCCCCcEEEEcc
Q 019160 182 SQQGGMLDDICNESTCFLRLNRYPVCPIS-AEMFGLVPHTDSDFLTILYQDQVGGLQLM-KDSKWVAVRPNPDALIVNIG 259 (345)
Q Consensus 182 gl~~~~f~~~~~~~~~~lrl~~Yp~~~~~-~~~~~~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~p~~g~liVnvG 259 (345)
|+++++|.+.+..+.+.||++|||+++.. +..+|+++|||+|+||||+||.++||||+ ++|+|++|+|.||++|||+|
T Consensus 162 gl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g~Wi~V~p~pg~lvVNvG 241 (320)
T PTZ00273 162 GLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSGEWMDVPPLEGSFVVNIG 241 (320)
T ss_pred CcCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEecCCCCceEEECCCCCEEeCCCCCCeEEEEHH
Confidence 99999999888778889999999999863 45789999999999999999999999998 68999999999999999999
Q ss_pred ccchhhcCCcccCccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHHHH
Q 019160 260 DLFQAWSNDVYKSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQEDV 325 (345)
Q Consensus 260 d~L~~~TnG~~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~~~ 325 (345)
|+||+||||+|+|++|||+.+ ..+|||++||++|+.|++|.|. ++|++|++++++||+..+....
T Consensus 242 D~l~~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~~ 312 (320)
T PTZ00273 242 DMMEMWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFAET 312 (320)
T ss_pred HHHHHHHCCeeeCCCccccCC-CCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHHHHHHHHHHH
Confidence 999999999999999999864 5789999999999999999983 3688999999999998876544
No 6
>PLN02947 oxidoreductase
Probab=100.00 E-value=2.5e-70 Score=527.52 Aligned_cols=295 Identities=30% Similarity=0.496 Sum_probs=248.4
Q ss_pred CCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC--CCCc
Q 019160 40 EECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLL--NNSY 117 (345)
Q Consensus 40 ~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~--~~~~ 117 (345)
...+||+|||+.+.+ .++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ....
T Consensus 63 ~~~~iPvIDls~l~~---~~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~ 139 (374)
T PLN02947 63 GNLKLPVIDLAELRG---SNRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPV 139 (374)
T ss_pred CCCCCCeEECcccCC---ccHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCe
Confidence 346799999999864 23567889999999999999999999999999999999999999999999998332 2234
Q ss_pred ccCCCCCC-CCCCCCcccccCCCCCCCC-CCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---cccccc
Q 019160 118 RWGTPTAT-CPKQFSWSEAFHIPLTKIS-DQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQG---GMLDDI 191 (345)
Q Consensus 118 ~~g~~~~~-~~~~~d~~E~~~~~~~~~~-~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~---~~f~~~ 191 (345)
+||..... .....+|+|.+.+...... ..+.||. +++||+.+++|+++|.+|+.+|+++|+++||+++ ++|.+.
T Consensus 140 gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~ 219 (374)
T PLN02947 140 RYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVAATYAKATKRLFLELMEAILESLGIVKRGSDELLEE 219 (374)
T ss_pred eeccccccccccccCceeceeeecCCcccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHH
Confidence 55433221 2234789998876322111 1356985 7899999999999999999999999999999974 466666
Q ss_pred ccccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCccc
Q 019160 192 CNESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYK 271 (345)
Q Consensus 192 ~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~ 271 (345)
+....+.+|++|||+|+.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.||++|||+||+||+||||+||
T Consensus 220 ~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~k 299 (374)
T PLN02947 220 FEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYK 299 (374)
T ss_pred hcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEe
Confidence 66677899999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHHHHHhhCCccCCCceee
Q 019160 272 SVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQEDVKQTGHKVGLPRFLQ 339 (345)
Q Consensus 272 S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~ 339 (345)
|++|||+.++.++||||+||+.|+.|++|.|. ++|++|++++++||++..... ....+..++.++|
T Consensus 300 S~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~--~~~~~~~l~~~~~ 371 (374)
T PLN02947 300 SVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYMDTDFATFLAYLASA--EGKHKNFLESRKL 371 (374)
T ss_pred ccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHh--ccCchhhhhhhhc
Confidence 99999999888899999999999999999983 478999999999999876542 2334455566654
No 7
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=3.4e-70 Score=525.94 Aligned_cols=284 Identities=30% Similarity=0.473 Sum_probs=246.5
Q ss_pred CCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC---CC
Q 019160 40 EECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLN---NS 116 (345)
Q Consensus 40 ~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~---~~ 116 (345)
...+||||||+.+.++++++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ..
T Consensus 44 ~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~ 123 (360)
T PLN03178 44 AGPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYANDQARGAA 123 (360)
T ss_pred cCCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCc
Confidence 346799999999988888888899999999999999999999999999999999999999999999999985432 23
Q ss_pred cccCCCCC-CCCCCCCcccccCCCC--CCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccc
Q 019160 117 YRWGTPTA-TCPKQFSWSEAFHIPL--TKISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDIC 192 (345)
Q Consensus 117 ~~~g~~~~-~~~~~~d~~E~~~~~~--~~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 192 (345)
.||+.... ...+..||+|.+.... ......+.||. +|+||+.+++|++.|.+++.+||++||++||+++++|.+.+
T Consensus 124 ~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 203 (360)
T PLN03178 124 QGYGSKLAANASGQLEWEDYFFHLTLPEDKRDPSLWPKTPPDYVPATSEYSRSLRSLATKLLAILSLGLGLPEDRLEKEV 203 (360)
T ss_pred cccccccccccccccchhHhhccccCCccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh
Confidence 35654332 2234578999775521 11122456985 78999999999999999999999999999999999998876
Q ss_pred c---ccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCc
Q 019160 193 N---ESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDV 269 (345)
Q Consensus 193 ~---~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~ 269 (345)
. ...+.||++|||+++.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.+|++|||+||+||+||||+
T Consensus 204 ~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~ 283 (360)
T PLN03178 204 GGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFILHNMVPGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGR 283 (360)
T ss_pred cCcccchhhhheeccCCCCCCccccCcCCccCCCceEEEeeCCCCceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCc
Confidence 5 3456899999999988778899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccceeecCCCCceEEEEEeeCCCCCCee-eC------CCCCCCCCcccHHHHHHHHHH
Q 019160 270 YKSVEHKVMANGKMERYSVAYFLCPSYDSSI-GS------CTEPSTYRKFTFEEYRKQVQE 323 (345)
Q Consensus 270 ~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i-~p------~~~p~~y~~~~~~ey~~~~~~ 323 (345)
|||++|||+.++..+||||+||++|+.|++| .| .++|++|++++++||++.+..
T Consensus 284 ~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~~~~ 344 (360)
T PLN03178 284 YKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLF 344 (360)
T ss_pred cccccceeecCCCCCeEEEEEEecCCcccccccCcHHHcCCCCcccCCCccHHHHHHHHHh
Confidence 9999999998878889999999999998754 76 247889999999999987654
No 8
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=6.1e-70 Score=524.23 Aligned_cols=285 Identities=37% Similarity=0.630 Sum_probs=248.1
Q ss_pred CCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC-Cc
Q 019160 39 MEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNN-SY 117 (345)
Q Consensus 39 ~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~ 117 (345)
...++||+|||+.+.++++++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..... ..
T Consensus 47 ~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~ 126 (362)
T PLN02393 47 PAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYE 126 (362)
T ss_pred CcCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCccc
Confidence 34578999999999888888889999999999999999999999999999999999999999999999999854433 33
Q ss_pred ccCCCCC-CCCCCCCcccccCCCC--CCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc
Q 019160 118 RWGTPTA-TCPKQFSWSEAFHIPL--TKISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICN 193 (345)
Q Consensus 118 ~~g~~~~-~~~~~~d~~E~~~~~~--~~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 193 (345)
||+.... ......||+|.|.+.. ......+.||. +++||+.+++|+++|.+++.+||++||++||+++++|.+.+.
T Consensus 127 Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~ 206 (362)
T PLN02393 127 GYGSRLGVEKGAILDWSDYYFLHYLPSSLKDPNKWPSLPPSCRELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQNAFG 206 (362)
T ss_pred ccccccccccccccCchhheeeeecCccccchhhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhC
Confidence 5543322 2234579999887632 11223456985 689999999999999999999999999999999999988765
Q ss_pred cc---ccceeeeecCCCCCCcccCCCCCcccCCcEEEEee-CCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCc
Q 019160 194 ES---TCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQ-DQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDV 269 (345)
Q Consensus 194 ~~---~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~q-d~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~ 269 (345)
.. .+.||++|||+++.++..+|+++|||+|+||||+| ++++||||+++|+|++|+|.||++|||+||+||+||||+
T Consensus 207 ~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~ 286 (362)
T PLN02393 207 GEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAI 286 (362)
T ss_pred CCccccceeeeeecCCCCCcccccccccccCCceEEEEeeCCCCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCe
Confidence 43 36899999999988777899999999999999998 469999999999999999999999999999999999999
Q ss_pred ccCccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHH
Q 019160 270 YKSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQE 323 (345)
Q Consensus 270 ~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~ 323 (345)
|+|++|||+.++..+||||+||++|+.|++|.|. ++|++|++++++||+..+..
T Consensus 287 ~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~ 346 (362)
T PLN02393 287 YKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRT 346 (362)
T ss_pred eeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCCCCCccHHHHHHHHHh
Confidence 9999999999888899999999999999999982 47899999999999886553
No 9
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1e-69 Score=519.78 Aligned_cols=293 Identities=31% Similarity=0.511 Sum_probs=246.3
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCC-C-CCCccc
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGL-L-NNSYRW 119 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~-~-~~~~~~ 119 (345)
.+||+|||+.+.+.+ +.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.. . .+..++
T Consensus 40 ~~iPvIDls~~~~~~---~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~ 116 (348)
T PLN02912 40 DSIPLIDLRDLHGPN---RADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRL 116 (348)
T ss_pred CCCCeEECcccCCcC---HHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcccc
Confidence 579999999986533 56678999999999999999999999999999999999999999999999522 1 122233
Q ss_pred CCCCC-CCCCCCCcccccCCCCC-CCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc
Q 019160 120 GTPTA-TCPKQFSWSEAFHIPLT-KISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICNEST 196 (345)
Q Consensus 120 g~~~~-~~~~~~d~~E~~~~~~~-~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~ 196 (345)
+.... ......||+|.+.+... .....+.||. +++||+.+++|+++|.+|+.+|+++||++||+++++|.+.+....
T Consensus 117 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~il~~la~~Lgl~~~~f~~~~~~~~ 196 (348)
T PLN02912 117 STSFNVSKEKVSNWRDFLRLHCYPIEDFIEEWPSTPISFREVTAEYATSVRALVLTLLEAISESLGLEKDRVSNTLGKHG 196 (348)
T ss_pred cccccccccccCCchheEEEeecCcccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcc
Confidence 32221 12234689998876321 1112456884 789999999999999999999999999999999999988777778
Q ss_pred cceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcccCccce
Q 019160 197 CFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVEHK 276 (345)
Q Consensus 197 ~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~HR 276 (345)
+.||++||||++.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.||++|||+||+|++||||+|+|++||
T Consensus 197 ~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HR 276 (348)
T PLN02912 197 QHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHR 276 (348)
T ss_pred ceeeeeecCCCCChhhcCCcCCCcCCCceEEEEECCCCceEEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEccccc
Confidence 89999999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCceEEEEEeeCCCCCCeeeCC------C--CCCCCCcccHHHHHHHHHHHHHhhCCccCCCceee
Q 019160 277 VMANGKMERYSVAYFLCPSYDSSIGSC------T--EPSTYRKFTFEEYRKQVQEDVKQTGHKVGLPRFLQ 339 (345)
Q Consensus 277 Vv~~~~~~R~Si~~F~~P~~d~~i~p~------~--~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~ 339 (345)
|+.++..+||||+||++|+.|++|.|. + +|++|++++++||++.+..+.. .+ +..++.|+.
T Consensus 277 Vv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~-~~~l~~~~~ 345 (348)
T PLN02912 277 AVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAF-AT-ESCIDSFKA 345 (348)
T ss_pred ccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHHHHhccc-CC-cchhhhhhc
Confidence 998888899999999999999999983 2 4789999999999987765432 22 333555543
No 10
>PLN02904 oxidoreductase
Probab=100.00 E-value=1.1e-69 Score=520.99 Aligned_cols=280 Identities=27% Similarity=0.446 Sum_probs=241.3
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC--CCCcc
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLL--NNSYR 118 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~--~~~~~ 118 (345)
..+||+|||+.+.+ ++.|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .++++
T Consensus 49 ~~~iPvIDls~~~~--~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~ 126 (357)
T PLN02904 49 TITLPVIDLSLLHD--PLLRSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDNVHEPVR 126 (357)
T ss_pred CCCCCEEECcccCC--chhHHHHHHHHHHHHHHCceEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccCCCCccc
Confidence 36799999998863 456778899999999999999999999999999999999999999999999997432 23334
Q ss_pred cCCCCCCC-CCCCCcccccCCCCCCC-CCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccc
Q 019160 119 WGTPTATC-PKQFSWSEAFHIPLTKI-SDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICNES 195 (345)
Q Consensus 119 ~g~~~~~~-~~~~d~~E~~~~~~~~~-~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~ 195 (345)
||...... ....+|+|.+....... ...+.||. +|+||+.+++|+++|.+|+.+|+++||++||+++++|.+.+...
T Consensus 127 ~g~~~~~~~~~~~~~~d~~~~~~~p~~~~~n~WP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~ 206 (357)
T PLN02904 127 YGTSLNHSTDRVHYWRDFIKHYSHPLSKWINLWPSNPPCYKEKVGKYAEATHVLHKQLIEAISESLGLEKNYLQEEIEEG 206 (357)
T ss_pred ccccccccCCCCCCceEEeeeccCCcccccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCc
Confidence 55432211 22347888764422111 11356985 79999999999999999999999999999999999999887777
Q ss_pred ccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEE-eCCeEEEecCCCCcEEEEccccchhhcCCcccCcc
Q 019160 196 TCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLM-KDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVE 274 (345)
Q Consensus 196 ~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~ 274 (345)
.+.||++|||+|+.++..+|+++|||+|+||||+|+ ++||||+ ++|+|++|+|.||++|||+||+||+||||+|||++
T Consensus 207 ~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~qd-~~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~ 285 (357)
T PLN02904 207 SQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQS-SQGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVV 285 (357)
T ss_pred ccEEEeeecCCCCCcccccCCcCccCCCceEEEecC-CCeeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccC
Confidence 789999999999987788999999999999999997 4899999 47999999999999999999999999999999999
Q ss_pred ceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHH
Q 019160 275 HKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQE 323 (345)
Q Consensus 275 HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~ 323 (345)
|||+.++..+||||+||+.|+.|++|+|. ++|++|++++++||++.+.+
T Consensus 286 HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~~~ey~~~~~~ 340 (357)
T PLN02904 286 HRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPAAYGEFSFNDFLDYISS 340 (357)
T ss_pred CcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCcCCCCCHHHHHHHHHh
Confidence 99999888899999999999999999983 47899999999999987665
No 11
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.1e-69 Score=517.21 Aligned_cols=286 Identities=40% Similarity=0.687 Sum_probs=246.0
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcC--CCCCCcc
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCG--LLNNSYR 118 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~--~~~~~~~ 118 (345)
..+||+|||+.+. +++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++. .....+.
T Consensus 36 ~~~IPvIDls~~~----------~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~ 105 (341)
T PLN02984 36 DIDIPVIDMECLD----------MEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYF 105 (341)
T ss_pred cCCCCeEeCcHHH----------HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccc
Confidence 4669999999762 369999999999999999999999999999999999999999999974 2222222
Q ss_pred cCCCCC--C--------CCCCCCcccccCCCCCCCC---C-CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 019160 119 WGTPTA--T--------CPKQFSWSEAFHIPLTKIS---D-QSCYGEFTSLRLVMTEFAAAMSKLARLLARILAENLSQQ 184 (345)
Q Consensus 119 ~g~~~~--~--------~~~~~d~~E~~~~~~~~~~---~-~~~wp~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 184 (345)
+|.... . .....||+|.|.++..... . ++.||.+|+||+.+++|+++|.+|+..|+++||++||++
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~~~~~~~~p~~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA~~Lgl~ 185 (341)
T PLN02984 106 WGTPALTPSGKALSRGPQESNVNWVEGFNIPLSSLSLLQTLSCSDPKLESFRVLMEEYGKHLTRIAVTLFEAIAKTLSLE 185 (341)
T ss_pred cCcccccccccccccccccCCCCeeeEEeCcCCchhhhhhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 222110 0 0124799999998643211 1 122456789999999999999999999999999999999
Q ss_pred --CccccccccccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccc
Q 019160 185 --GGMLDDICNESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLF 262 (345)
Q Consensus 185 --~~~f~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L 262 (345)
+++|.+.+..+.+.||++|||+++..+..+|+++|||+|+||||+||+++||||+++|+|++|+|.||++|||+||+|
T Consensus 186 ~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~~~g~Wv~V~p~pgalVVNiGD~L 265 (341)
T PLN02984 186 LSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEVGGLEVMKDGEWFNVKPIANTLVVNLGDMM 265 (341)
T ss_pred cchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCCCCeeEeeCCceEECCCCCCeEEEECChhh
Confidence 899988887778899999999998777789999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCcccCccceee-cCCCCceEEEEEeeCCCCCCeeeCCCCCCCCCcccHHHHHHHHHHHHHhhCCccCCCceeec
Q 019160 263 QAWSNDVYKSVEHKVM-ANGKMERYSVAYFLCPSYDSSIGSCTEPSTYRKFTFEEYRKQVQEDVKQTGHKVGLPRFLQV 340 (345)
Q Consensus 263 ~~~TnG~~~S~~HRVv-~~~~~~R~Si~~F~~P~~d~~i~p~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~ 340 (345)
|+||||+|+|++|||+ .++..+|||++||++|+.|++|. |++|++++++||++.+..+.+..+.+.++++|+++
T Consensus 266 e~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~----p~~y~p~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 340 (341)
T PLN02984 266 QVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIK----SSKYKPFTYSDFEAQVQLDVKTLGSKVGLSRFKSN 340 (341)
T ss_pred hhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEc----cCCcCcccHHHHHHHHHhhhhccCCcccccceecC
Confidence 9999999999999996 45568899999999999999997 47999999999999988887777888889999986
No 12
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=8.1e-70 Score=521.62 Aligned_cols=274 Identities=34% Similarity=0.565 Sum_probs=237.0
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC-CcccC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNN-SYRWG 120 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~~g 120 (345)
.+||||||+.. .++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....+ ..||+
T Consensus 55 ~~iPvIDl~~~---------~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~~~~~Gy~ 125 (358)
T PLN02254 55 ESIPVIDLSDP---------NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSPDGVSGYG 125 (358)
T ss_pred CCCCeEeCCCH---------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccccc
Confidence 57999999742 247899999999999999999999999999999999999999999999854433 34666
Q ss_pred CCCCCC-CCCCCcccccCCCCCCC-CCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccc-----
Q 019160 121 TPTATC-PKQFSWSEAFHIPLTKI-SDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDIC----- 192 (345)
Q Consensus 121 ~~~~~~-~~~~d~~E~~~~~~~~~-~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~----- 192 (345)
...... ....||+|.|.+..... ...+.||. +++||+.+++|+++|.+|+.+||++|+++||+++++|...+
T Consensus 126 ~~~~~~~~~~~~w~e~~~~~~~p~~~~~~~wP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~ 205 (358)
T PLN02254 126 VARISSFFNKKMWSEGFTIMGSPLEHARQLWPQDHTKFCDVMEEYQKEMKKLAERLMWLMLGSLGITEEDIKWAGPKSGS 205 (358)
T ss_pred ccccccccCCCCceeeEEeecCccccchhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcccc
Confidence 543322 24478999998732111 12356985 78999999999999999999999999999999988886543
Q ss_pred cccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeCC-eEEEecCCCCcEEEEccccchhhcCCccc
Q 019160 193 NESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKDS-KWVAVRPNPDALIVNIGDLFQAWSNDVYK 271 (345)
Q Consensus 193 ~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~g-~W~~V~p~~g~liVnvGd~L~~~TnG~~~ 271 (345)
..+.+.||++|||+|+.++..+|+++|||+|+||||+||+++||||+++| +|++|+|.||++|||+||+||+||||+|+
T Consensus 206 ~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Qd~v~GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~k 285 (358)
T PLN02254 206 QGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQSNTSGLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFP 285 (358)
T ss_pred cCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEecCCCCCceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeec
Confidence 45567899999999998888899999999999999999999999999665 89999999999999999999999999999
Q ss_pred CccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHHH
Q 019160 272 SVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQED 324 (345)
Q Consensus 272 S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~~ 324 (345)
|++|||+.++.++||||+||++|+.|++|.|. ++|++|++++++||++.+.+.
T Consensus 286 S~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~~~~~ 344 (358)
T PLN02254 286 SVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKLVDPNHPPLYRSVTWKEYLATKAKH 344 (358)
T ss_pred cccceeecCCCCCEEEEEEEecCCCCcEEeCcHHhcCCCCCcccCCcCHHHHHHHHHHh
Confidence 99999999888999999999999999999983 478999999999999876543
No 13
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.1e-69 Score=519.94 Aligned_cols=280 Identities=30% Similarity=0.570 Sum_probs=242.2
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC-Cccc
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNN-SYRW 119 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~~ 119 (345)
..+||+|||+.+. ..++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..... .+||
T Consensus 24 ~~~iPvIDls~~~---~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY 100 (345)
T PLN02750 24 DEEIPVIDLSVST---SHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRDEVNPMGY 100 (345)
T ss_pred CCCCCeEECCCCC---cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccCc
Confidence 3579999999853 23467788999999999999999999999999999999999999999999999844322 2355
Q ss_pred CCCCCCCCCCCCcccccCCCCCC----C-----C------CCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 019160 120 GTPTATCPKQFSWSEAFHIPLTK----I-----S------DQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQ 183 (345)
Q Consensus 120 g~~~~~~~~~~d~~E~~~~~~~~----~-----~------~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 183 (345)
... ....+..||+|.|.+.... . . ..+.||. +++||+.+++|++.|.+|+..|+++||++||+
T Consensus 101 ~~~-~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 179 (345)
T PLN02750 101 HDS-EHTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQNPSHFRELCQEYARQVEKLAFKLLELISLSLGL 179 (345)
T ss_pred Ccc-cccccCCCceeEEEEeecccccccccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 321 1122346999999773210 0 0 1356985 68999999999999999999999999999999
Q ss_pred CCccccccccccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEE--eCCeEEEecCCCCcEEEEcccc
Q 019160 184 QGGMLDDICNESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLM--KDSKWVAVRPNPDALIVNIGDL 261 (345)
Q Consensus 184 ~~~~f~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~--~~g~W~~V~p~~g~liVnvGd~ 261 (345)
++++|.+.+..+.+.||++|||+++.++..+|+++|||+|+||||+||+++||||+ .+|+|++|+|.||++|||+||+
T Consensus 180 ~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~~g~Wi~V~p~pg~~vVNiGD~ 259 (345)
T PLN02750 180 PADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGLQISRRSDGEWIPVKPIPDAFIINIGNC 259 (345)
T ss_pred CHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCCceEEeecCCCeEEEccCCCCeEEEEhHHH
Confidence 99999988888888999999999987777899999999999999999999999997 4799999999999999999999
Q ss_pred chhhcCCcccCccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHHH
Q 019160 262 FQAWSNDVYKSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQED 324 (345)
Q Consensus 262 L~~~TnG~~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~~ 324 (345)
|++||||+|+|++|||+.++..+||||+||++|+.|++|.|. ++|++|++++++||+..+...
T Consensus 260 L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e~~~~~~~~ 328 (345)
T PLN02750 260 MQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGKFFASRNRS 328 (345)
T ss_pred HHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccHHHHHHHHHhc
Confidence 999999999999999999888899999999999999999982 478899999999998876543
No 14
>PLN02997 flavonol synthase
Probab=100.00 E-value=3.2e-69 Score=511.59 Aligned_cols=275 Identities=25% Similarity=0.422 Sum_probs=238.8
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCcccC
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNNSYRWG 120 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~g 120 (345)
..+||||||+.+. +.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.......||.
T Consensus 30 ~~~IPvIDls~~~------~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~GY~ 103 (325)
T PLN02997 30 AVDVPVVDLSVSD------EDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEGYK 103 (325)
T ss_pred CCCCCeEECCCCC------HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCccccC
Confidence 4589999999752 3567889999999999999999999999999999999999999999999985543333554
Q ss_pred CCCCCCCCCCCcccccCCCC--CCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccc--
Q 019160 121 TPTATCPKQFSWSEAFHIPL--TKISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICNES-- 195 (345)
Q Consensus 121 ~~~~~~~~~~d~~E~~~~~~--~~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~-- 195 (345)
... ..+..||+|.+.... ......+.||. +++||+.+++|++.|.+|+.+|+++|+++||+++++|.+.+...
T Consensus 104 ~~~--~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~~~~~~~~~ 181 (325)
T PLN02997 104 RNY--LGGINNWDEHLFHRLSPPSIINYKYWPKNPPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETFTQSIGGETA 181 (325)
T ss_pred ccc--ccCCCCccceeEeeecCccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCcc
Confidence 332 234568999765421 11223466985 78999999999999999999999999999999999998876533
Q ss_pred ccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcccCccc
Q 019160 196 TCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVEH 275 (345)
Q Consensus 196 ~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~H 275 (345)
.+.||++|||+++.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.||++|||+||+||+||||+|+|++|
T Consensus 182 ~~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~H 261 (325)
T PLN02997 182 EYVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIPNEVPGLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLH 261 (325)
T ss_pred cceeeeecCCCCCCcccccCccCccCCCceEEEecCCCCCEEEeECCcEEECCCCCCeEEEEechHHHHHhCCccccccc
Confidence 35799999999988777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHH
Q 019160 276 KVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQE 323 (345)
Q Consensus 276 RVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~ 323 (345)
||+.+...+|||++||++|+.|++|.|. ++|++|++++++||++++.+
T Consensus 262 RVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~ 315 (325)
T PLN02997 262 RAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQKIR 315 (325)
T ss_pred eeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHh
Confidence 9999888899999999999999999983 47889999999999987655
No 15
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=3.3e-69 Score=511.00 Aligned_cols=291 Identities=33% Similarity=0.514 Sum_probs=242.7
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCcccCC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNNSYRWGT 121 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~g~ 121 (345)
.+||+|||+.+.. .++.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++..... +|..
T Consensus 5 ~~iPvIDls~~~~---~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~--gy~~ 79 (321)
T PLN02299 5 ESFPVIDMEKLNG---EERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVASK--GLEG 79 (321)
T ss_pred CCCCEEECcCCCc---ccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccCCC--Cccc
Confidence 6699999999853 2356678999999999999999999999999999999999999999999999743322 2211
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc---cccc
Q 019160 122 PTATCPKQFSWSEAFHIPLTKISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICN---ESTC 197 (345)
Q Consensus 122 ~~~~~~~~~d~~E~~~~~~~~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~---~~~~ 197 (345)
. .......||+|.|.+........+.||+ +++||+.+++|++.|.+++.+|+++|+++||+++++|.+.+. ...+
T Consensus 80 ~-~~~~~~~d~ke~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~ 158 (321)
T PLN02299 80 V-QTEVEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTF 158 (321)
T ss_pred c-cccCCCcCHHHHcccccCCccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccc
Confidence 1 1122346999999774221122344885 689999999999999999999999999999999999987664 2455
Q ss_pred ceeeeecCCCCCCcccCCCCCcccCCcEEEEeeC-CCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcccCccce
Q 019160 198 FLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQD-QVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVEHK 276 (345)
Q Consensus 198 ~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~HR 276 (345)
.||++||||++.++...|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+||||+|+|+.||
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HR 238 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHR 238 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccce
Confidence 7999999999887778899999999999999996 599999999999999999999999999999999999999999999
Q ss_pred eecCCCCceEEEEEeeCCCCCCeeeCC------C--CCCCCCcccHHHHHHHHHHHHHhhCCccCCCceee
Q 019160 277 VMANGKMERYSVAYFLCPSYDSSIGSC------T--EPSTYRKFTFEEYRKQVQEDVKQTGHKVGLPRFLQ 339 (345)
Q Consensus 277 Vv~~~~~~R~Si~~F~~P~~d~~i~p~------~--~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~ 339 (345)
|+.++..+||||+||++|+.|++|.|. + +|.+|+|++++||++.+... ...+.+..++.+++
T Consensus 239 Vv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~-~~~~~~~~~~~~~~ 308 (321)
T PLN02299 239 VVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGL-KFQAKEPRFEAMKA 308 (321)
T ss_pred eecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHc-ccCCccchhhhhhc
Confidence 999888899999999999999999982 1 47899999999999876643 22233344455554
No 16
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.3e-68 Score=512.09 Aligned_cols=277 Identities=29% Similarity=0.482 Sum_probs=238.0
Q ss_pred CCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC-CCc
Q 019160 39 MEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLN-NSY 117 (345)
Q Consensus 39 ~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~-~~~ 117 (345)
++.++||+|||+.+.++++..+.. +++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ...
T Consensus 40 ~~~~~IPvIDls~~~~~~~~~~~~-~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~~~~~~~~~~~ 118 (348)
T PLN00417 40 VPEMDIPAIDLSLLLSSSDDGREE-LSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIGSIQ 118 (348)
T ss_pred ccCCCCCeEEChhhcCCCchHHHH-HHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCcc
Confidence 455789999999998766655544 589999999999999999999999999999999999999999999985433 334
Q ss_pred ccCCCCC-CCCCCCCcccccCCCCC--CCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc
Q 019160 118 RWGTPTA-TCPKQFSWSEAFHIPLT--KISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICN 193 (345)
Q Consensus 118 ~~g~~~~-~~~~~~d~~E~~~~~~~--~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 193 (345)
||+.... ......||+|.+.+... .....+.||. +++||+.+++|+.+|.+|+.+|+++||++||+++++|.+.+.
T Consensus 119 GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~LGl~~~~f~~~~~ 198 (348)
T PLN00417 119 GYGNDMILSDDQVLDWIDRLYLTTYPEDQRQLKFWPQVPVGFRETLHEYTMKQRLVIEKFFKAMARSLELEENCFLEMYG 198 (348)
T ss_pred ccccccccccCCCcCccceeecccCCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhc
Confidence 6654432 12345789998766321 1122356985 689999999999999999999999999999999999987765
Q ss_pred c-cccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeC-CCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCccc
Q 019160 194 E-STCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQD-QVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYK 271 (345)
Q Consensus 194 ~-~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~ 271 (345)
. ..+.||++|||+++.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+||||+|+
T Consensus 199 ~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~k 278 (348)
T PLN00417 199 ENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYK 278 (348)
T ss_pred cCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCceeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeec
Confidence 4 3467999999999887778999999999999999996 6999999999999999999999999999999999999999
Q ss_pred CccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHH
Q 019160 272 SVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEE 316 (345)
Q Consensus 272 S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~e 316 (345)
|++|||+.++..+||||+||++|+.|++|+|. .+|++|++++.++
T Consensus 279 St~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~~~~ 329 (348)
T PLN00417 279 SPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRLYKTVKKYV 329 (348)
T ss_pred ccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCCCCCHHHHH
Confidence 99999999888899999999999999999983 4789999999444
No 17
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.5e-69 Score=514.19 Aligned_cols=278 Identities=35% Similarity=0.569 Sum_probs=239.6
Q ss_pred CCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCC--CCCc
Q 019160 40 EECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLL--NNSY 117 (345)
Q Consensus 40 ~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~--~~~~ 117 (345)
...+||+|||+.. ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+.+
T Consensus 34 ~~~~iPvIDls~~------~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~~~~~ 107 (337)
T PLN02639 34 TCENVPVIDLGSP------DRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTM 107 (337)
T ss_pred cCCCCCeEECCCc------cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCcc
Confidence 3467999999963 2567889999999999999999999999999999999999999999999997332 2223
Q ss_pred ccCCCCCC-CCCCCCcccccCCCCCCC-CCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccc
Q 019160 118 RWGTPTAT-CPKQFSWSEAFHIPLTKI-SDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICNE 194 (345)
Q Consensus 118 ~~g~~~~~-~~~~~d~~E~~~~~~~~~-~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 194 (345)
+++..... .....+|+|.+.+..... ...+.||. +++||+.+++|+++|.+|+.+|+++||++||+++++|.+.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 187 (337)
T PLN02639 108 RLSTSFNVRKEKVHNWRDYLRLHCYPLDKYVPEWPSNPPSFKEIVSTYCREVRELGFRLQEAISESLGLEKDYIKNVLGE 187 (337)
T ss_pred ccccccccccCcccCchheEEeeecCCcccchhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCC
Confidence 33322211 123468999887632111 12356885 7899999999999999999999999999999999999887777
Q ss_pred cccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeC-CCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcccCc
Q 019160 195 STCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQD-QVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKSV 273 (345)
Q Consensus 195 ~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~ 273 (345)
..+.||++|||+++.++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+||||+|+|+
T Consensus 188 ~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt 267 (337)
T PLN02639 188 QGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSV 267 (337)
T ss_pred CccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEeecCCeEEeccCCCCeEEEechhHHHHHhCCeeecc
Confidence 7789999999999887778999999999999999998 499999999999999999999999999999999999999999
Q ss_pred cceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHH
Q 019160 274 EHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQE 323 (345)
Q Consensus 274 ~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~ 323 (345)
+|||+.++..+||||+||++|+.|++|.|. ++|++|++++++||++.+..
T Consensus 268 ~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~~~ 323 (337)
T PLN02639 268 WHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWS 323 (337)
T ss_pred CcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHHHHh
Confidence 999998888899999999999999999982 47899999999999987654
No 18
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=9.5e-69 Score=510.70 Aligned_cols=285 Identities=26% Similarity=0.422 Sum_probs=240.2
Q ss_pred CCCCCCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC
Q 019160 35 NGIMMEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLN 114 (345)
Q Consensus 35 ~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~ 114 (345)
+++.+....||+|||+.. ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....
T Consensus 6 ~~~~~~~~~iP~IDl~~~------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~ 79 (332)
T PLN03002 6 KDSTMKVSSLNCIDLAND------DLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNE 79 (332)
T ss_pred ccccCCCCCCCEEeCCch------hHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence 345556678999999942 24557889999999999999999999999999999999999999999999985444
Q ss_pred CCcccCCCCCCC-----CCCCCcccccCCCC----CCC------CCCCCCCC---chhHHHHHHHHHHHHHHHHHHHHHH
Q 019160 115 NSYRWGTPTATC-----PKQFSWSEAFHIPL----TKI------SDQSCYGE---FTSLRLVMTEFAAAMSKLARLLARI 176 (345)
Q Consensus 115 ~~~~~g~~~~~~-----~~~~d~~E~~~~~~----~~~------~~~~~wp~---~~~fr~~~~~y~~~~~~l~~~ll~~ 176 (345)
...||+...... ....||+|.|.+.. .+. ...+.||. +|+||+.+++|+++|.+|+..|+++
T Consensus 80 ~~~GY~~~~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~ 159 (332)
T PLN03002 80 KHRGYTPVLDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKL 159 (332)
T ss_pred CCCCcCcccccccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344554322211 11369999997742 111 12356985 5899999999999999999999999
Q ss_pred HHHHhCCCCccccc--cccccccceeeeecCCCCCCc-ccCCCCCcccCCcEEEEeeCCCCceEEEe-----CCeEEEec
Q 019160 177 LAENLSQQGGMLDD--ICNESTCFLRLNRYPVCPISA-EMFGLVPHTDSDFLTILYQDQVGGLQLMK-----DSKWVAVR 248 (345)
Q Consensus 177 la~~Lgl~~~~f~~--~~~~~~~~lrl~~Yp~~~~~~-~~~~~~~HtD~g~lTlL~qd~~~GLqV~~-----~g~W~~V~ 248 (345)
||++||+++++|.+ ....+.+.||++|||+++..+ ..+|+++|||+|+||||+||+++||||+. +|+|++|+
T Consensus 160 la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vp 239 (332)
T PLN03002 160 LALALDLDVGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVP 239 (332)
T ss_pred HHHHcCCChHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECC
Confidence 99999999999986 445566889999999997654 47899999999999999999999999985 36899999
Q ss_pred CCCCcEEEEccccchhhcCCcccCccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHH
Q 019160 249 PNPDALIVNIGDLFQAWSNDVYKSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQ 322 (345)
Q Consensus 249 p~~g~liVnvGd~L~~~TnG~~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~ 322 (345)
|.||++|||+||+|++||||+|+|++|||+.++ .+||||+||++|+.|++|.|. ++|.+|++++++||++.+.
T Consensus 240 p~pg~~VVNiGD~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~ 318 (332)
T PLN03002 240 PIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRY 318 (332)
T ss_pred CCCCeEEEEHHHHHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHH
Confidence 999999999999999999999999999999764 589999999999999999983 4788999999999999876
Q ss_pred HHHH
Q 019160 323 EDVK 326 (345)
Q Consensus 323 ~~~~ 326 (345)
....
T Consensus 319 ~~~~ 322 (332)
T PLN03002 319 EETH 322 (332)
T ss_pred HHHh
Confidence 6543
No 19
>PLN02485 oxidoreductase
Probab=100.00 E-value=2.7e-68 Score=507.94 Aligned_cols=284 Identities=24% Similarity=0.399 Sum_probs=240.2
Q ss_pred CCCceEecCCCCCC--C-----HHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC
Q 019160 42 CQLPLIDLIGLNSH--D-----ERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLN 114 (345)
Q Consensus 42 ~~iPvIDl~~l~~~--d-----~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~ 114 (345)
..||||||+.|.++ + +.++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....
T Consensus 6 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~ 85 (329)
T PLN02485 6 KSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIKMTP 85 (329)
T ss_pred CCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhcccC
Confidence 56999999998642 2 2356778999999999999999999999999999999999999999999999984332
Q ss_pred -C-CcccCCCCC-CCCCCCCcccccCCCC----CC-------CCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019160 115 -N-SYRWGTPTA-TCPKQFSWSEAFHIPL----TK-------ISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAE 179 (345)
Q Consensus 115 -~-~~~~g~~~~-~~~~~~d~~E~~~~~~----~~-------~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~ 179 (345)
. ..||..... ...+..||+|.|.+.. .. ....|.||. +++||+.+++|++.|.+++.+|+++||+
T Consensus 86 ~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~~a~ 165 (329)
T PLN02485 86 AAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRGIAL 165 (329)
T ss_pred CCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 234532221 1234579999887632 10 113466985 7899999999999999999999999999
Q ss_pred HhCCCCccccccc-cccccceeeeecCCCCC----CcccCCCCCcccCCcEEEEeeC-CCCceEEE-eCCeEEEecCCCC
Q 019160 180 NLSQQGGMLDDIC-NESTCFLRLNRYPVCPI----SAEMFGLVPHTDSDFLTILYQD-QVGGLQLM-KDSKWVAVRPNPD 252 (345)
Q Consensus 180 ~Lgl~~~~f~~~~-~~~~~~lrl~~Yp~~~~----~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~-~~g~W~~V~p~~g 252 (345)
+||+++++|.+.+ ..+.+.||++|||+++. ++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.||
T Consensus 166 ~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p~pg 245 (329)
T PLN02485 166 ALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIPIPG 245 (329)
T ss_pred HcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCCCCC
Confidence 9999998887653 44567899999999975 3457899999999999999997 58999998 7899999999999
Q ss_pred cEEEEccccchhhcCCcccCccceeecCCCCceEEEEEeeCCCCCCeeeCC--------CCCCCCCcccHHHHHHHHHHH
Q 019160 253 ALIVNIGDLFQAWSNDVYKSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC--------TEPSTYRKFTFEEYRKQVQED 324 (345)
Q Consensus 253 ~liVnvGd~L~~~TnG~~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~--------~~p~~y~~~~~~ey~~~~~~~ 324 (345)
++|||+||+|++||||+|+|++|||+.++..+||||+||++|+.|++|+|. .+|++|++++++||+..+...
T Consensus 246 ~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~~~~ 325 (329)
T PLN02485 246 TFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKVLT 325 (329)
T ss_pred cEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCCcEeHHHHHHHHHHH
Confidence 999999999999999999999999998888899999999999999999982 357899999999999887654
Q ss_pred H
Q 019160 325 V 325 (345)
Q Consensus 325 ~ 325 (345)
.
T Consensus 326 ~ 326 (329)
T PLN02485 326 N 326 (329)
T ss_pred h
Confidence 3
No 20
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=4.3e-68 Score=482.38 Aligned_cols=262 Identities=29% Similarity=0.506 Sum_probs=236.0
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC--Ccc
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNN--SYR 118 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~--~~~ 118 (345)
...||+|||+.+..+++.+|..++.+|++||+++|||||+||||+..++++++.++++||+||.|+|.++....+ ..|
T Consensus 3 ~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~rG 82 (322)
T COG3491 3 TRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHRG 82 (322)
T ss_pred CCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCccccc
Confidence 467999999999988888999999999999999999999999999999999999999999999999999844332 334
Q ss_pred cCCCCC-CCCCCCCcccccCCCCCC------------CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 019160 119 WGTPTA-TCPKQFSWSEAFHIPLTK------------ISDQSCYGEFTSLRLVMTEFAAAMSKLARLLARILAENLSQQG 185 (345)
Q Consensus 119 ~g~~~~-~~~~~~d~~E~~~~~~~~------------~~~~~~wp~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~ 185 (345)
|..... ...+..||+|.++++.+- ..+.|.||..|+||+.+..|+++|.+++.+||++||.+|||++
T Consensus 83 Y~~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP~ip~~r~~ll~~~~~~~~~~~rLL~aiA~~LdL~~ 162 (322)
T COG3491 83 YTPHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWPAIPGLRDALLQYYRAMTAVGLRLLRAIALGLDLPE 162 (322)
T ss_pred cccCcccccCCccchhhhcccccccccccCCCccCCCcCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 433322 234456999999884311 1134569999999999999999999999999999999999999
Q ss_pred ccccccccccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEE-eCCeEEEecCCCCcEEEEccccchh
Q 019160 186 GMLDDICNESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLM-KDSKWVAVRPNPDALIVNIGDLFQA 264 (345)
Q Consensus 186 ~~f~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~p~~g~liVnvGd~L~~ 264 (345)
++|...+.++.+.+|+++||+.+..+...+.++|||+|+||||+||.++||||+ ..|+|++|+|.||++|||+||+||+
T Consensus 163 d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdmLe~ 242 (322)
T COG3491 163 DFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGGWLDVPPIPGTLVVNIGDMLER 242 (322)
T ss_pred hhhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEecccCCeEEecCCCCeeECCCCCCeEEEeHHHHHHH
Confidence 999999999999999999999998888888999999999999999999999999 5599999999999999999999999
Q ss_pred hcCCcccCccceeecCCCCceEEEEEeeCCCCCCeeeC
Q 019160 265 WSNDVYKSVEHKVMANGKMERYSVAYFLCPSYDSSIGS 302 (345)
Q Consensus 265 ~TnG~~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p 302 (345)
||||+++||+|||+.++..+||||+||+.|+.|+.|.|
T Consensus 243 ~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~P 280 (322)
T COG3491 243 WTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAP 280 (322)
T ss_pred HhCCeeccccceeecCCCccceeeeeeccCCCCccccc
Confidence 99999999999999999899999999999999999997
No 21
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=1.5e-67 Score=498.40 Aligned_cols=285 Identities=40% Similarity=0.655 Sum_probs=249.4
Q ss_pred CCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC-CCc
Q 019160 39 MEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLN-NSY 117 (345)
Q Consensus 39 ~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~-~~~ 117 (345)
+...+||+|||+.+...++ .+..++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.... ...
T Consensus 13 ~~~~~iPvIDls~~~~~~~-~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~ 91 (322)
T KOG0143|consen 13 TSELDIPVIDLSCLDSDDP-GREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYR 91 (322)
T ss_pred ccCCCcCeEECCCCCCcch-hHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCcc
Confidence 3457899999998876655 67778899999999999999999999999999999999999999999999986655 346
Q ss_pred ccCCCCCC-CCCCCCcccccCCCCCCC--CCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc
Q 019160 118 RWGTPTAT-CPKQFSWSEAFHIPLTKI--SDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICN 193 (345)
Q Consensus 118 ~~g~~~~~-~~~~~d~~E~~~~~~~~~--~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 193 (345)
||++.... .....+|.+.+.+..... ...+.||+ ++.||+.+++|.+.+.+++..|+++|+++||+..+++...+.
T Consensus 92 gY~~~~~~~~~~~~~w~d~~~~~~~p~~~~~~~~wp~~p~~~re~~~eY~~~~~~L~~~l~~~l~eslgl~~~~~~~~~~ 171 (322)
T KOG0143|consen 92 GYGTSFILSPLKELDWRDYLTLLSAPESSFDPNLWPEGPPEFRETMEEYAKEVMELSEKLLRLLSESLGLEPEYLEKLFG 171 (322)
T ss_pred cccccccccccccccchhheeeeccCccccCcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhC
Confidence 77766543 234688999887643222 23455885 889999999999999999999999999999999766666665
Q ss_pred c-cccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeC-CCCceEEE-eCCeEEEecCCCCcEEEEccccchhhcCCcc
Q 019160 194 E-STCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQD-QVGGLQLM-KDSKWVAVRPNPDALIVNIGDLFQAWSNDVY 270 (345)
Q Consensus 194 ~-~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~-~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~ 270 (345)
. ....+|+||||+|+.++..+|+++|||.++||+|+|| +++||||. ++|+|++|+|.||++|||+||+||+||||+|
T Consensus 172 ~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~y 251 (322)
T KOG0143|consen 172 ETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRY 251 (322)
T ss_pred CccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcc
Confidence 5 4668999999999999999999999999999999997 89999999 6999999999999999999999999999999
Q ss_pred cCccceeecCCCCceEEEEEeeCCCCCCeeeCC-----CCCCCCCcccHHHHHHHHHHH
Q 019160 271 KSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC-----TEPSTYRKFTFEEYRKQVQED 324 (345)
Q Consensus 271 ~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~-----~~p~~y~~~~~~ey~~~~~~~ 324 (345)
+|+.|||++++.++|||+|+|+.|..+.+|.|. ..|++|+++++.+|++.+...
T Consensus 252 kSv~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~~~~Y~~~~~~~y~~~~~~~ 310 (322)
T KOG0143|consen 252 KSVLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEEPPKYKPFTFGDYLEFYFSK 310 (322)
T ss_pred cceEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCCCCccCcEEHHHHHHHHHhc
Confidence 999999999988889999999999999999983 237789999999999976653
No 22
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=1.2e-67 Score=501.92 Aligned_cols=274 Identities=27% Similarity=0.515 Sum_probs=233.1
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCcccC
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNNSYRWG 120 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~g 120 (345)
+..||+|||+.. ++ .++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..+||+
T Consensus 24 ~~~iPvIDls~~-----~~----~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~-~~~Gy~ 93 (335)
T PLN02156 24 PVLIPVIDLTDS-----DA----KTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP-DPFGYG 93 (335)
T ss_pred CCCCCcccCCCh-----HH----HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC-CCcccC
Confidence 356999999832 22 45899999999999999999999999999999999999999999998433 344665
Q ss_pred CCCCCCCCCCCcccccCCCCCCC----CCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cccccccc-
Q 019160 121 TPTATCPKQFSWSEAFHIPLTKI----SDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQG-GMLDDICN- 193 (345)
Q Consensus 121 ~~~~~~~~~~d~~E~~~~~~~~~----~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~-~~f~~~~~- 193 (345)
..........+|+|.+.+..... ...+.||. +++||+.+++|++.|.+|+.+|+++||++||+++ ++|.+.+.
T Consensus 94 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~wp~~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~~~~~ 173 (335)
T PLN02156 94 TKRIGPNGDVGWLEYILLNANLCLESHKTTAVFRHTPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSKLVKV 173 (335)
T ss_pred ccccCCCCCCCceeeEeeecCCccccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHHhcC
Confidence 43333333468999987743211 12345875 6899999999999999999999999999999974 68877653
Q ss_pred -ccccceeeeecCCCCCC--cccCCCCCcccCCcEEEEeeCCCCceEEE-eCCeEEEecCCCCcEEEEccccchhhcCCc
Q 019160 194 -ESTCFLRLNRYPVCPIS--AEMFGLVPHTDSDFLTILYQDQVGGLQLM-KDSKWVAVRPNPDALIVNIGDLFQAWSNDV 269 (345)
Q Consensus 194 -~~~~~lrl~~Yp~~~~~--~~~~~~~~HtD~g~lTlL~qd~~~GLqV~-~~g~W~~V~p~~g~liVnvGd~L~~~TnG~ 269 (345)
...+.||++|||+++.. +..+|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||+||+||+||||+
T Consensus 174 ~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~ 253 (335)
T PLN02156 174 KESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGR 253 (335)
T ss_pred CCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCe
Confidence 34578999999999753 24689999999999999999999999998 789999999999999999999999999999
Q ss_pred ccCccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHHH
Q 019160 270 YKSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQED 324 (345)
Q Consensus 270 ~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~~ 324 (345)
|+|+.|||+.+...+||||+||+.|+.|++|.|. ++|.+|++++++||+..+...
T Consensus 254 ~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~ 314 (335)
T PLN02156 254 FKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKT 314 (335)
T ss_pred eeccceeeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhc
Confidence 9999999998888899999999999999999983 478999999999999876643
No 23
>PLN02704 flavonol synthase
Probab=100.00 E-value=9.8e-68 Score=504.58 Aligned_cols=277 Identities=29% Similarity=0.491 Sum_probs=236.5
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCC---CCc
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLN---NSY 117 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~---~~~ 117 (345)
..+||+|||+... +.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... ...
T Consensus 40 ~~~iPvIDls~~~------~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~ 113 (335)
T PLN02704 40 DPQVPTIDLSDPD------EEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFELPQEEKEVYAKPPDSKSIE 113 (335)
T ss_pred CCCCCeEECCCcc------HHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhccCCCcccc
Confidence 4579999999642 3457889999999999999999999999999999999999999999999985432 123
Q ss_pred ccCCCCC-CCCCCCCcccccCCCC--CCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc
Q 019160 118 RWGTPTA-TCPKQFSWSEAFHIPL--TKISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICN 193 (345)
Q Consensus 118 ~~g~~~~-~~~~~~d~~E~~~~~~--~~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 193 (345)
||+.... ...+..+|+|.+.... ......+.||. +|+||+.+++|+++|.+|+.+|+++|+++||+++++|.+.+.
T Consensus 114 Gy~~~~~~~~~~~~~~~d~~~~~~~p~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 193 (335)
T PLN02704 114 GYGTKLQKEPEGKKAWVDHLFHRIWPPSAINYQFWPKNPPSYREVNEEYAKYLRGVADKLFKTLSLGLGLEEDELKEAVG 193 (335)
T ss_pred cccccccccccCcccceeeeEeeecCCcccchhhCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhc
Confidence 5544322 1234467888664311 11112356985 789999999999999999999999999999999999987654
Q ss_pred c--cccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCccc
Q 019160 194 E--STCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYK 271 (345)
Q Consensus 194 ~--~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~ 271 (345)
. ..+.||++|||+++.++..+|+++|||+|+||||+||+++||||+++|+|++|+|.||++|||+||+||+||||+||
T Consensus 194 ~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~k 273 (335)
T PLN02704 194 GEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYK 273 (335)
T ss_pred CCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEecCCCCceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeee
Confidence 3 24579999999998877789999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHHHHHHHHHH
Q 019160 272 SVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFEEYRKQVQE 323 (345)
Q Consensus 272 S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ey~~~~~~ 323 (345)
|++|||+.++..+||||+||++|+.|++|.|. ++|++|++++++||+..+..
T Consensus 274 St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 274 SVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKDYVYCKLN 331 (335)
T ss_pred cccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCccCCCCCHHHHHHHHHh
Confidence 99999999888899999999999999999983 47899999999999887654
No 24
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=5.3e-67 Score=492.42 Aligned_cols=269 Identities=34% Similarity=0.507 Sum_probs=228.8
Q ss_pred CCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCcc
Q 019160 39 MEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNNSYR 118 (345)
Q Consensus 39 ~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~ 118 (345)
|+...||||||+.+. + .+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.......|
T Consensus 1 ~~~~~iPvIDls~~~----~----~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~G 72 (300)
T PLN02365 1 MAEVNIPTIDLEEFP----G----QIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSG 72 (300)
T ss_pred CCcCCCCEEEChhhH----H----HHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCC
Confidence 456779999999873 1 24799999999999999999999999999999999999999999999633222334
Q ss_pred cCCCCCCCCCCCCcccccCCCCC-CC---CCC-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCccccccc
Q 019160 119 WGTPTATCPKQFSWSEAFHIPLT-KI---SDQ-SCYGEFTSLRLVMTEFAAAMSKLARLLARILAENLSQ-QGGMLDDIC 192 (345)
Q Consensus 119 ~g~~~~~~~~~~d~~E~~~~~~~-~~---~~~-~~wp~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl-~~~~f~~~~ 192 (345)
|.... ...+++|.+.+... .. ... +.|+.+|+||+.+++|+++|.+|+.+|+++|+++||+ ++++|.+.
T Consensus 73 Y~~~~----~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~~~- 147 (300)
T PLN02365 73 YMAPS----EVNPLYEALGLYDMASPQAVDTFCSQLDASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGW- 147 (300)
T ss_pred CCCcC----CCCCchhheecccccCchhhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHhhc-
Confidence 53322 12367888766321 11 111 1245678999999999999999999999999999999 77788763
Q ss_pred cccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCC-CCceEEEe--CCeEEEecCCCCcEEEEccccchhhcCCc
Q 019160 193 NESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQ-VGGLQLMK--DSKWVAVRPNPDALIVNIGDLFQAWSNDV 269 (345)
Q Consensus 193 ~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~-~~GLqV~~--~g~W~~V~p~~g~liVnvGd~L~~~TnG~ 269 (345)
.+.||++|||+++..+..+|+++|||+|+||||+||+ ++||||+. +|+|++|+|.||++|||+||+||+||||+
T Consensus 148 ---~~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~ 224 (300)
T PLN02365 148 ---PSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGR 224 (300)
T ss_pred ---ccceeeeecCCCCCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCc
Confidence 4789999999998877789999999999999999984 99999984 68999999999999999999999999999
Q ss_pred ccCccceeecCCCCceEEEEEeeCCCCCCeeeC------CCCCCCCCcccHHHHHHHHHH
Q 019160 270 YKSVEHKVMANGKMERYSVAYFLCPSYDSSIGS------CTEPSTYRKFTFEEYRKQVQE 323 (345)
Q Consensus 270 ~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p------~~~p~~y~~~~~~ey~~~~~~ 323 (345)
|+|++|||+.++..+||||+||+.|+.|++|.| .++|.+|++++++||+..+..
T Consensus 225 ~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~ 284 (300)
T PLN02365 225 LCNVKHRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLS 284 (300)
T ss_pred eecccceeEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHh
Confidence 999999999988889999999999999999998 247889999999999987654
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=6.3e-67 Score=491.07 Aligned_cols=292 Identities=28% Similarity=0.486 Sum_probs=240.9
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCcccCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNNSYRWGTP 122 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~g~~ 122 (345)
+||+|||+.+.. .+|.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|.........+. .
T Consensus 2 ~iPvIDls~~~~---~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~~~~~~~~~~--~- 75 (303)
T PLN02403 2 EIPVIDFDQLDG---EKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFYESEIAKALD--N- 75 (303)
T ss_pred CCCeEeCccCCc---ccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhhcccccCccc--c-
Confidence 699999998853 3466788999999999999999999999999999999999999999999952111111111 0
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc---ccccc
Q 019160 123 TATCPKQFSWSEAFHIPLTKISDQSCYGE-FTSLRLVMTEFAAAMSKLARLLARILAENLSQQGGMLDDICN---ESTCF 198 (345)
Q Consensus 123 ~~~~~~~~d~~E~~~~~~~~~~~~~~wp~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~---~~~~~ 198 (345)
.......||+|.|.+........+.||+ +|+||+.+++|+++|.+++.+|+++|+++||+++++|.+.+. ...+.
T Consensus 76 -~~~~~~~d~kE~~~~~~~p~~~~~~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~ 154 (303)
T PLN02403 76 -EGKTSDVDWESSFFIWHRPTSNINEIPNLSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKEAFSGNKGPSVG 154 (303)
T ss_pred -cCCCCCccHhhhcccccCCccchhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCccce
Confidence 1122356999999874321112345886 699999999999999999999999999999999999987765 33456
Q ss_pred eeeeecCCCCCCcccCCCCCcccCCcEEEEeeC-CCCceEEEeCCeEEEecCCC-CcEEEEccccchhhcCCcccCccce
Q 019160 199 LRLNRYPVCPISAEMFGLVPHTDSDFLTILYQD-QVGGLQLMKDSKWVAVRPNP-DALIVNIGDLFQAWSNDVYKSVEHK 276 (345)
Q Consensus 199 lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~p~~-g~liVnvGd~L~~~TnG~~~S~~HR 276 (345)
+|++|||+++.++...|+++|||+|+||||+|+ +++||||+++|+|++|+|.| |++|||+||+||+||||+|+|++||
T Consensus 155 lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HR 234 (303)
T PLN02403 155 TKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHR 234 (303)
T ss_pred eeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeecccce
Confidence 999999999877667899999999999999997 59999999999999999999 6999999999999999999999999
Q ss_pred eecCCCCceEEEEEeeCCCCCCeeeCCCCCCCCCc-ccHHHHHHHHHHHHHhhCCccCCCceeecccc
Q 019160 277 VMANGKMERYSVAYFLCPSYDSSIGSCTEPSTYRK-FTFEEYRKQVQEDVKQTGHKVGLPRFLQVKNA 343 (345)
Q Consensus 277 Vv~~~~~~R~Si~~F~~P~~d~~i~p~~~p~~y~~-~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (345)
|+.+...+|||++||++|+.|++|.|... ..|++ ++++||++.+... +....+..++.|++-.|.
T Consensus 235 Vv~~~~~~R~Si~~F~~p~~d~~i~pl~~-~~~~~~~~~~eyl~~~~~~-~~~~~~~~~~~~~~~~~~ 300 (303)
T PLN02403 235 VMADKNGSRLSIATFYNPAGDAIISPAPK-LLYPSNYRFQDYLKLYSTT-KFGDKGPRFESMKKMANG 300 (303)
T ss_pred eecCCCCCEEEEEEEEcCCCCCeEeCchh-hCCCCCccHHHHHHHHHHh-ccccccchHHHhhhhhcc
Confidence 99988889999999999999999998532 24664 9999999876652 334455557777776664
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2e-56 Score=411.89 Aligned_cols=232 Identities=28% Similarity=0.447 Sum_probs=199.5
Q ss_pred HHHHHHHhhC-CCHHHHhhcCCCCC---CcccCCCCCC---CCCCCCcccccCCCCCC--CCCCCCCCC-chhHHHHHHH
Q 019160 92 MRKEQELLFK-TPFERKATCGLLNN---SYRWGTPTAT---CPKQFSWSEAFHIPLTK--ISDQSCYGE-FTSLRLVMTE 161 (345)
Q Consensus 92 ~~~~~~~fF~-lP~e~K~~~~~~~~---~~~~g~~~~~---~~~~~d~~E~~~~~~~~--~~~~~~wp~-~~~fr~~~~~ 161 (345)
+.+.+++||+ ||.|+|+++....+ ..||+..... .....||+|.|.+.... ....+.||. +|+||+.+++
T Consensus 1 ~~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~n~wP~~~~~f~~~~~~ 80 (262)
T PLN03001 1 MRSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHTFPLSRRNPSHWPDFPPDYREVVGE 80 (262)
T ss_pred ChHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEeeecCccccchhhCCCCcHHHHHHHHH
Confidence 3568899997 99999999854432 2356433321 12246999999873211 112356985 7899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccccccccccccceeeeecCCCCCCcccCCCCCcccCCcEEEEeeCCCCceEEEeC
Q 019160 162 FAAAMSKLARLLARILAENLSQQGGMLDDICNESTCFLRLNRYPVCPISAEMFGLVPHTDSDFLTILYQDQVGGLQLMKD 241 (345)
Q Consensus 162 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~ 241 (345)
|+++|.+|+.+|+++|+++||+++++|.+.+....+.+|++|||+++.++..+|+++|||+|+||||+||+++||||+++
T Consensus 81 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~ 160 (262)
T PLN03001 81 YGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQDDVEGLQLLKD 160 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEeCCCCceEEeeC
Confidence 99999999999999999999999999988777777889999999999877889999999999999999999999999999
Q ss_pred CeEEEecCCCCcEEEEccccchhhcCCcccCccceeecCCCCceEEEEEeeCCCCCCeeeCC------CCCCCCCcccHH
Q 019160 242 SKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVEHKVMANGKMERYSVAYFLCPSYDSSIGSC------TEPSTYRKFTFE 315 (345)
Q Consensus 242 g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~------~~p~~y~~~~~~ 315 (345)
|+|++|+|.||++|||+||+|++||||+|+|++|||+.+...+||||+||++|+.|++|.|. ++|++|++++++
T Consensus 161 g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~e~v~~~~p~~y~~~~~~ 240 (262)
T PLN03001 161 AEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPRYCEIVYG 240 (262)
T ss_pred CeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCCEEeCChHhcCCCCCCcCCCccHH
Confidence 99999999999999999999999999999999999999888899999999999999999983 478899999999
Q ss_pred HHHHHHHH
Q 019160 316 EYRKQVQE 323 (345)
Q Consensus 316 ey~~~~~~ 323 (345)
||+..+..
T Consensus 241 e~l~~~~~ 248 (262)
T PLN03001 241 EYVSSWYS 248 (262)
T ss_pred HHHHHHHH
Confidence 99986654
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.91 E-value=7.8e-25 Score=172.55 Aligned_cols=95 Identities=47% Similarity=0.844 Sum_probs=76.0
Q ss_pred cceeeeecCCCCCCcccCCCCCcccC--CcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcccCcc
Q 019160 197 CFLRLNRYPVCPISAEMFGLVPHTDS--DFLTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVE 274 (345)
Q Consensus 197 ~~lrl~~Yp~~~~~~~~~~~~~HtD~--g~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~ 274 (345)
+.+|+++||+ ++...++++|+|. +++|+|+|++++||||...++|+.|++.++.++||+||+|+.||||.++|+.
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~ 78 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATL 78 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccccccccCccCccceeeeeceeeeecccCCccCCce
Confidence 4699999998 4556789999999 9999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCCceEEEEEeeCC
Q 019160 275 HKVMANGKMERYSVAYFLCP 294 (345)
Q Consensus 275 HRVv~~~~~~R~Si~~F~~P 294 (345)
|||+.+....|+|++||++|
T Consensus 79 HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 79 HRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp EEEE--STS-EEEEEEEEE-
T ss_pred eeeEcCCCCCEEEEEEEECC
Confidence 99999888999999999987
No 28
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.86 E-value=4e-22 Score=161.89 Aligned_cols=93 Identities=31% Similarity=0.575 Sum_probs=76.7
Q ss_pred CceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCcccCCCC
Q 019160 44 LPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNNSYRWGTPT 123 (345)
Q Consensus 44 iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~g~~~ 123 (345)
||||||+. +.+.|.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++..+....||....
T Consensus 1 iPvIDls~----~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~ 76 (116)
T PF14226_consen 1 IPVIDLSP----DPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARSPSYRGYSPPG 76 (116)
T ss_dssp --EEEHGG----CHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCCTTCSEEEESE
T ss_pred CCeEECCC----CCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCCCCCcccccCC
Confidence 79999998 56789999999999999999999999999999999999999999999999999995555445554433
Q ss_pred CCCC--CCCCcccccCCCC
Q 019160 124 ATCP--KQFSWSEAFHIPL 140 (345)
Q Consensus 124 ~~~~--~~~d~~E~~~~~~ 140 (345)
.... +..||+|.|.+..
T Consensus 77 ~~~~~~~~~d~~E~~~~~~ 95 (116)
T PF14226_consen 77 SESTDGGKPDWKESFNIGP 95 (116)
T ss_dssp EECCTTCCCCSEEEEEEEC
T ss_pred ccccCCCCCCceEEeEEEC
Confidence 2211 3689999998843
No 29
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.80 E-value=5.4e-19 Score=144.05 Aligned_cols=80 Identities=25% Similarity=0.509 Sum_probs=68.5
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC-Cccc
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKTPFERKATCGLLNN-SYRW 119 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~~ 119 (345)
..+||||||+.+.+++ ..+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++...++ ..||
T Consensus 35 ~~~iPvIDls~~~~~~-~~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~FF~LP~e~K~k~~~~~~~~~gy 113 (120)
T PLN03176 35 SNEIPVISIAGIDDGG-EKRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEKLRFDMSGGKKGGF 113 (120)
T ss_pred CCCCCeEECccccCCc-hHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHhcccCCCccCCc
Confidence 3579999999998665 3467789999999999999999999999999999999999999999999999855443 3355
Q ss_pred CC
Q 019160 120 GT 121 (345)
Q Consensus 120 g~ 121 (345)
+.
T Consensus 114 ~~ 115 (120)
T PLN03176 114 IV 115 (120)
T ss_pred ch
Confidence 43
No 30
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.43 E-value=0.0028 Score=49.39 Aligned_cols=78 Identities=31% Similarity=0.467 Sum_probs=53.1
Q ss_pred eeeeecCCCCCCcccCCCCCcccC-----CcEEEEee--CC-----CCceEEEe----CCeEEEec-----CCCCcEEEE
Q 019160 199 LRLNRYPVCPISAEMFGLVPHTDS-----DFLTILYQ--DQ-----VGGLQLMK----DSKWVAVR-----PNPDALIVN 257 (345)
Q Consensus 199 lrl~~Yp~~~~~~~~~~~~~HtD~-----g~lTlL~q--d~-----~~GLqV~~----~g~W~~V~-----p~~g~liVn 257 (345)
+++++|++-. .+.+|+|. ..+|+|+. +. .+.|++.. ++....+. |.+|.+|+.
T Consensus 1 ~~~~~y~~G~------~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPPGG------FFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEETTE------EEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECcCC------EEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 4677886532 47899999 46888843 22 25577773 35566666 999998875
Q ss_pred ccccchhhcCCcccCccceeecC-CCCceEEEEEeeC
Q 019160 258 IGDLFQAWSNDVYKSVEHKVMAN-GKMERYSVAYFLC 293 (345)
Q Consensus 258 vGd~L~~~TnG~~~S~~HRVv~~-~~~~R~Si~~F~~ 293 (345)
-+ ...+|+|... ....|+++.+|++
T Consensus 75 ~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp ES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 54 4579999887 6688999999873
No 31
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=95.95 E-value=0.12 Score=44.74 Aligned_cols=104 Identities=21% Similarity=0.212 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHhCCCCccccccccccccceeeeecCCCCCCcccCCCCCcccCC--------cEEEEee--C-CC-Cce
Q 019160 169 LARLLARILAENLSQQGGMLDDICNESTCFLRLNRYPVCPISAEMFGLVPHTDSD--------FLTILYQ--D-QV-GGL 236 (345)
Q Consensus 169 l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g--------~lTlL~q--d-~~-~GL 236 (345)
+...|.+.++..++++.. .......+++.+|.+-. ...+|.|.. .+|+++. + .. |.|
T Consensus 60 ~~~~l~~~i~~~~~~~~~-----~~~~~~~~~~~~Y~~g~------~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~ 128 (178)
T smart00702 60 VIERIRQRLADFLGLLRG-----LPLSAEDAQVARYGPGG------HYGPHVDNFEDDENGDRIATFLLYLNDVEEGGEL 128 (178)
T ss_pred HHHHHHHHHHHHHCCCch-----hhccCcceEEEEECCCC------cccCcCCCCCCCCCCCeEEEEEEEeccCCcCceE
Confidence 444555666666666421 11234568899998732 367899976 5887765 2 23 346
Q ss_pred EEEeCC--eEEEecCCCCcEEEEc-cccchhhcCCcccCccceeecCCCCceEEEEEeeC
Q 019160 237 QLMKDS--KWVAVRPNPDALIVNI-GDLFQAWSNDVYKSVEHKVMANGKMERYSVAYFLC 293 (345)
Q Consensus 237 qV~~~g--~W~~V~p~~g~liVnv-Gd~L~~~TnG~~~S~~HRVv~~~~~~R~Si~~F~~ 293 (345)
.+...+ ....|.|..|.+|+.- ++ ...+|.|.......|+++..+++
T Consensus 129 ~f~~~~~~~~~~v~P~~G~~v~f~~~~----------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 129 VFPGLGLMVCATVKPKKGDLLFFPSGR----------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred EecCCCCccceEEeCCCCcEEEEeCCC----------CCccccCCcceeCCEEEEEEEEC
Confidence 666443 2668899999888743 32 16789998665578999998764
No 32
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=95.29 E-value=0.21 Score=45.17 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=35.6
Q ss_pred CCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcccCccceeecCCCCceEEEEEeeC
Q 019160 233 VGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVEHKVMANGKMERYSVAYFLC 293 (345)
Q Consensus 233 ~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~HRVv~~~~~~R~Si~~F~~ 293 (345)
.|.|.+....+=..|.|..|.+|+.-. +.+|+|..-....||++.+..+
T Consensus 129 GGEl~~~~~~g~~~Vkp~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi~ 177 (226)
T PRK05467 129 GGELVIEDTYGEHRVKLPAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWIQ 177 (226)
T ss_pred CCceEEecCCCcEEEecCCCeEEEECC------------CCceeeeeccCccEEEEEecHH
Confidence 455877743223678888888887653 4789998756678999988775
No 33
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=93.51 E-value=1.2 Score=38.45 Aligned_cols=68 Identities=18% Similarity=0.167 Sum_probs=45.8
Q ss_pred CCCCCcccC----CcEEEEeeC----CCCceEEEeC-----CeEEEecCCCCcEEEEccccchhhcCCcccCccceeec-
Q 019160 214 FGLVPHTDS----DFLTILYQD----QVGGLQLMKD-----SKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVEHKVMA- 279 (345)
Q Consensus 214 ~~~~~HtD~----g~lTlL~qd----~~~GLqV~~~-----g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~HRVv~- 279 (345)
.....|.|. ..+|++..- ..+|+-+... ++ +.+.+.+|++++.+|-.+. |-|..
T Consensus 85 r~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g-~~~~~~~GtVl~~~~~~~~-----------Hgvtpv 152 (171)
T PF12851_consen 85 RCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILG-VAFAYQPGTVLIFCAKREL-----------HGVTPV 152 (171)
T ss_pred cCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCC-EEEecCCCcEEEEccccee-----------eecCcc
Confidence 457889998 677777652 3456666644 33 6678889999988885432 33322
Q ss_pred ----CCCCceEEEEEeeC
Q 019160 280 ----NGKMERYSVAYFLC 293 (345)
Q Consensus 280 ----~~~~~R~Si~~F~~ 293 (345)
....+|+|++||++
T Consensus 153 ~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 153 ESPNRNHGTRISLVFYQH 170 (171)
T ss_pred cCCCCCCCeEEEEEEEeE
Confidence 12378999999985
No 34
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=72.35 E-value=9.9 Score=32.90 Aligned_cols=78 Identities=21% Similarity=0.322 Sum_probs=43.0
Q ss_pred cceeeeecCCCCCCcccCCCCCcccCCcE-------EEEeeCCCCceEEEe---CCeEEEecCCCCcEEEEccccchhhc
Q 019160 197 CFLRLNRYPVCPISAEMFGLVPHTDSDFL-------TILYQDQVGGLQLMK---DSKWVAVRPNPDALIVNIGDLFQAWS 266 (345)
Q Consensus 197 ~~lrl~~Yp~~~~~~~~~~~~~HtD~g~l-------TlL~qd~~~GLqV~~---~g~W~~V~p~~g~liVnvGd~L~~~T 266 (345)
..+-+|+|.+. . ++++|.|-..+ ||=+. ...-+.+.. .+..+.+...+|+++|+-|++=..|
T Consensus 97 n~~liN~Y~~g-----~-~i~~H~D~~~~~~~~~I~slSLG-~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~- 168 (194)
T PF13532_consen 97 NQCLINYYRDG-----S-GIGPHSDDEEYGFGPPIASLSLG-SSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW- 168 (194)
T ss_dssp SEEEEEEESST-----T--EEEE---TTC-CCSEEEEEEEE-S-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-
T ss_pred CEEEEEecCCC-----C-CcCCCCCcccccCCCcEEEEEEc-cCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-
Confidence 35678899773 3 78999987733 22121 112244442 4689999999999999999875555
Q ss_pred CCcccCccceeecCC---------CCceEEEEE
Q 019160 267 NDVYKSVEHKVMANG---------KMERYSVAY 290 (345)
Q Consensus 267 nG~~~S~~HRVv~~~---------~~~R~Si~~ 290 (345)
|.|.... ...|+||.|
T Consensus 169 --------H~I~~~~~~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 169 --------HGIPPVKKDTHPSHYVRGRRISLTF 193 (194)
T ss_dssp --------EEE-S-SCEEEESTEE-S-EEEEEE
T ss_pred --------eEcccccCCccccccCCCCEEEEEe
Confidence 4443322 237999876
No 35
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=69.94 E-value=4 Score=40.23 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=38.8
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFK 101 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~ 101 (345)
.-||.||++++.++. +.++..+.+++.|++.|.|+ ||.+......+..++|..
T Consensus 48 ~~IP~i~f~di~~~~------~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 48 SIIPEIDFADIENGG------VSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp -SS-EEEHHHHHCT---------HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCceeeHHHHhCCC------CCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 569999999987542 23467888999999999886 898888888888888754
No 36
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=66.16 E-value=70 Score=28.36 Aligned_cols=39 Identities=26% Similarity=0.365 Sum_probs=30.0
Q ss_pred CeEEEecCCCCcEEEEccccchhhcCCcccCccceeecCC-CCceEEEEEee
Q 019160 242 SKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVEHKVMANG-KMERYSVAYFL 292 (345)
Q Consensus 242 g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~HRVv~~~-~~~R~Si~~F~ 292 (345)
..|+.+.|.+|.+|+.-+. ..|+|.... +.+|+||+|=+
T Consensus 159 ~~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 159 QRFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred CccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 3588899999999985542 369988765 47999999854
No 37
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=64.22 E-value=11 Score=29.17 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=22.6
Q ss_pred CeEEEecCCCCcEEEEccccchhhcCCcccCccceeecCCC-CceEEEEE
Q 019160 242 SKWVAVRPNPDALIVNIGDLFQAWSNDVYKSVEHKVMANGK-MERYSVAY 290 (345)
Q Consensus 242 g~W~~V~p~~g~liVnvGd~L~~~TnG~~~S~~HRVv~~~~-~~R~Si~~ 290 (345)
..+..++|.+|.+||.-+. ..|+|..... .+|+||+|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~------------l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSW------------LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETT------------SEEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCC------------CEEeccCcCCCCCEEEEEc
Confidence 4688899999999997663 3688876544 68999997
No 38
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=62.03 E-value=1.2e+02 Score=27.21 Aligned_cols=77 Identities=16% Similarity=0.142 Sum_probs=46.0
Q ss_pred ceeeeecCCCCCCcccCCCCCcccCC-----c--EEEEeeCCCCceEEE---eCCeEEEecCCCCcEEEEccccchhhcC
Q 019160 198 FLRLNRYPVCPISAEMFGLVPHTDSD-----F--LTILYQDQVGGLQLM---KDSKWVAVRPNPDALIVNIGDLFQAWSN 267 (345)
Q Consensus 198 ~lrl~~Yp~~~~~~~~~~~~~HtD~g-----~--lTlL~qd~~~GLqV~---~~g~W~~V~p~~g~liVnvGd~L~~~Tn 267 (345)
.+-+|+|.+-. +++.|.|-. . +++=+.+ ..=+.+. +++.+..+....|.++|+-|+. +.|
T Consensus 117 a~LvN~Y~~G~------~mg~H~D~~E~~~~~pI~SvSLG~-~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~~-- 186 (213)
T PRK15401 117 ACLINRYAPGA------KLSLHQDKDERDFRAPIVSVSLGL-PAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RLR-- 186 (213)
T ss_pred EEEEEeccCcC------ccccccCCCcccCCCCEEEEeCCC-CeEEEecccCCCCceEEEEeCCCCEEEECchH-hhe--
Confidence 36689997642 688999942 1 1111111 1113333 3456899999999999999885 433
Q ss_pred CcccCccceeecCC-------CCceEEEEE
Q 019160 268 DVYKSVEHKVMANG-------KMERYSVAY 290 (345)
Q Consensus 268 G~~~S~~HRVv~~~-------~~~R~Si~~ 290 (345)
.|.|.... +..|+|+.|
T Consensus 187 ------~HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 187 ------YHGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred ------eccCCcCCCCcCCCCCCCeEEEEe
Confidence 34443211 237999876
No 39
>PRK08130 putative aldolase; Validated
Probab=53.39 E-value=19 Score=32.02 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=28.8
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
..||++++... ++ .++++.+.+++++...+.+.|||+
T Consensus 126 g~i~v~~y~~~--g~----~~la~~~~~~l~~~~~vll~nHGv 162 (213)
T PRK08130 126 GHVPLIPYYRP--GD----PAIAEALAGLAARYRAVLLANHGP 162 (213)
T ss_pred CccceECCCCC--Ch----HHHHHHHHHHhccCCEEEEcCCCC
Confidence 46899988753 22 245678889999999999999995
No 40
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=52.73 E-value=17 Score=31.46 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=28.3
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
..||++++... ++ .++++.+.+++++...+.|.|||+
T Consensus 119 ~~v~v~~~~~~--g~----~~la~~~~~~l~~~~~vll~nHGv 155 (184)
T PRK08333 119 KKIPILPFRPA--GS----VELAEQVAEAMKEYDAVIMERHGI 155 (184)
T ss_pred CCEeeecCCCC--Cc----HHHHHHHHHHhccCCEEEEcCCCC
Confidence 36899988753 22 245678888898888999999995
No 41
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=46.87 E-value=2.6e+02 Score=26.56 Aligned_cols=47 Identities=15% Similarity=0.121 Sum_probs=29.3
Q ss_pred EEecCCCCcEEEEccccchhhcCCcc-cCccceeecCCCCceEEEEEeeCCC
Q 019160 245 VAVRPNPDALIVNIGDLFQAWSNDVY-KSVEHKVMANGKMERYSVAYFLCPS 295 (345)
Q Consensus 245 ~~V~p~~g~liVnvGd~L~~~TnG~~-~S~~HRVv~~~~~~R~Si~~F~~P~ 295 (345)
+.|.|..|..|+.-= ...||.. +.++|.+..--..+++++...++-.
T Consensus 206 l~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~ 253 (310)
T PLN00052 206 LAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIR 253 (310)
T ss_pred eEeccCcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEEeeecc
Confidence 778888887665321 1134433 5678877654445788888777653
No 42
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=46.12 E-value=44 Score=29.82 Aligned_cols=67 Identities=18% Similarity=0.152 Sum_probs=42.6
Q ss_pred ccceeeeecCCCCCC-cccCCCCCcccCCcEEEEeeCCCCceEEE--eCCeEEEecCCCCcEEEEccccchhhcC
Q 019160 196 TCFLRLNRYPVCPIS-AEMFGLVPHTDSDFLTILYQDQVGGLQLM--KDSKWVAVRPNPDALIVNIGDLFQAWSN 267 (345)
Q Consensus 196 ~~~lrl~~Yp~~~~~-~~~~~~~~HtD~g~lTlL~qd~~~GLqV~--~~g~W~~V~p~~g~liVnvGd~L~~~Tn 267 (345)
...+|.+||.|.... +-...+. |--..+.|+..+-..+. +.|.=+.|||.-|+.++|+||-==.+.+
T Consensus 89 ~G~~~~~H~Hp~ade~E~y~vi~-----G~g~m~v~~~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~pLvf~~ 158 (209)
T COG2140 89 PGAMRELHYHPNADEPEIYYVLK-----GEGRMLVQKPEGEARVIAVRAGDVIYVPPGYGHYTINTGDEPLVFLN 158 (209)
T ss_pred CCcccccccCCCCCcccEEEEEe-----ccEEEEEEcCCCcEEEEEecCCcEEEeCCCcceEeecCCCCCEEEEE
Confidence 456889999886543 2222222 22344555554445554 5688899999999999999985444444
No 43
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=44.30 E-value=34 Score=33.16 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=36.2
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHH
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKMR 93 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~ 93 (345)
..+|.+|+..+...+.+ .+.++.+++.++|+..+.|-.++.+...++.
T Consensus 99 ~~~~~~~~~~~~~~~d~----~l~~~l~~l~~~G~v~~~g~~~~~~~~~~~a 146 (362)
T TIGR02410 99 LKDPSVHFKTTYDHTDS----TLKSFSKNIYKYGFTFVDNVPVTPEATEKLC 146 (362)
T ss_pred ccCCceeHHHHhccCHH----HHHHHHHHHHhhCEEEEcCCCCCHHHHHHHH
Confidence 45788999887653222 2568999999999999999998876655443
No 44
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=43.33 E-value=25 Score=34.05 Aligned_cols=47 Identities=19% Similarity=0.195 Sum_probs=35.5
Q ss_pred CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHH
Q 019160 41 ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLRKM 92 (345)
Q Consensus 41 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~ 92 (345)
.+.+|.||++++.+++ + .+.++.+++.++|+..+.+-.++.+.+.++
T Consensus 107 ~~~~~~~d~~~~~~~~-~----~~~~~~~~l~~~G~v~~rg~~~~~~~~~~~ 153 (366)
T TIGR02409 107 ELSLPKFDHEAVMKDD-S----VLLDWLSAVRDVGIAVLKGAPTKPGAVEKL 153 (366)
T ss_pred cccCCceeHHHHhCCH-H----HHHHHHHHHHhccEEEEeCCCCCHHHHHHH
Confidence 3668999998876432 2 246899999999999999998877654443
No 45
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=41.29 E-value=1.7e+02 Score=25.18 Aligned_cols=58 Identities=17% Similarity=0.152 Sum_probs=35.5
Q ss_pred ceeeeecCCCCCCcccCCCCCcccCCcEE---EEee--CCCCc-eEEE---eCCeEEEecCCCCcEEEEcccc
Q 019160 198 FLRLNRYPVCPISAEMFGLVPHTDSDFLT---ILYQ--DQVGG-LQLM---KDSKWVAVRPNPDALIVNIGDL 261 (345)
Q Consensus 198 ~lrl~~Yp~~~~~~~~~~~~~HtD~g~lT---lL~q--d~~~G-LqV~---~~g~W~~V~p~~g~liVnvGd~ 261 (345)
..-+|+|++-. +++.|.|-.-+. -+.. =+... +.+. +++....+...+|.++|+-|+.
T Consensus 96 ~~LvN~Y~~Gd------~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 96 ACLVNRYAPGA------TLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred EEEEEeecCCC------ccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 46689998752 589999953221 1111 01111 2332 2455888889999999998873
No 46
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=40.22 E-value=26 Score=24.48 Aligned_cols=37 Identities=30% Similarity=0.508 Sum_probs=24.3
Q ss_pred ccCCCCCcccCCcEE---EEee-C------CCCceEEE-eCCeEEEec
Q 019160 212 EMFGLVPHTDSDFLT---ILYQ-D------QVGGLQLM-KDSKWVAVR 248 (345)
Q Consensus 212 ~~~~~~~HtD~g~lT---lL~q-d------~~~GLqV~-~~g~W~~V~ 248 (345)
+..|.-+-+|..++| +|-. | -+.-|||+ .||.|.+|.
T Consensus 14 nsnG~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGpWqdik 61 (64)
T PF06820_consen 14 NSNGWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGPWQDIK 61 (64)
T ss_pred cCCccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCChhhcc
Confidence 345777888866655 4411 1 13558998 789999875
No 47
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=38.28 E-value=39 Score=30.31 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=27.7
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
.+|++++... ++ .++++.+.+++.+...+.|.|||+
T Consensus 127 ~v~~~~y~~~--gs----~ela~~v~~~l~~~~~vlL~nHGv 162 (217)
T PRK05874 127 DVRCTEYAAS--GT----PEVGRNAVRALEGRAAALIANHGL 162 (217)
T ss_pred ceeeecCCCC--Cc----HHHHHHHHHHhCcCCEEEEcCCCC
Confidence 4788877643 33 345678889999999999999995
No 48
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=34.00 E-value=54 Score=22.08 Aligned_cols=29 Identities=17% Similarity=0.351 Sum_probs=17.0
Q ss_pred ceEecCCCCCCCHHHHHHHHHHHHHHhhh
Q 019160 45 PLIDLIGLNSHDERERAASAKAMCRASSE 73 (345)
Q Consensus 45 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 73 (345)
|+|.+.-....+++++.++++.|.+++.+
T Consensus 1 P~i~i~~~~grt~eqk~~l~~~i~~~l~~ 29 (58)
T cd00491 1 PFVQIYILEGRTDEQKRELIERVTEAVSE 29 (58)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 45555444334567777777777666654
No 49
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=33.43 E-value=55 Score=29.14 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=25.9
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
.||++++... + -.++++.+.+++.+...+.|.|||+
T Consensus 124 ~i~~~~y~~~--g----s~~la~~v~~~l~~~~~vll~nHGv 159 (214)
T PRK06833 124 NVRCAEYATF--G----TKELAENAFEAMEDRRAVLLANHGL 159 (214)
T ss_pred CeeeccCCCC--C----hHHHHHHHHHHhCcCCEEEECCCCC
Confidence 4677666432 2 2245667888899999999999995
No 50
>PRK06755 hypothetical protein; Validated
Probab=33.41 E-value=43 Score=29.88 Aligned_cols=36 Identities=14% Similarity=0.092 Sum_probs=26.2
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
.||+|++..-. ...+++.+.+++++...+-|.|||+
T Consensus 136 ~IPiv~~~~~~------~~~la~~~~~~~~~~~avLl~~HGv 171 (209)
T PRK06755 136 TIPIVEDEKKF------ADLLENNVPNFIEGGGVVLVHNYGM 171 (209)
T ss_pred EEEEEeCCCch------hHHHHHHHHhhccCCCEEEEcCCCe
Confidence 69999886532 1334556667777888899999996
No 51
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=32.54 E-value=89 Score=26.50 Aligned_cols=59 Identities=25% Similarity=0.417 Sum_probs=33.7
Q ss_pred CCCcccCCc--EEEEeeCCCCceEEEeCCeEEEecCCCCcEEEEccccchhhcCCcc----cCccceeecCCCCceEEEE
Q 019160 216 LVPHTDSDF--LTILYQDQVGGLQLMKDSKWVAVRPNPDALIVNIGDLFQAWSNDVY----KSVEHKVMANGKMERYSVA 289 (345)
Q Consensus 216 ~~~HtD~g~--lTlL~qd~~~GLqV~~~g~W~~V~p~~g~liVnvGd~L~~~TnG~~----~S~~HRVv~~~~~~R~Si~ 289 (345)
+.+|+|.+- +++++. |+ +| .+...+.+|+.--.|..|.. -|-.|-|.+.+..+|+-+.
T Consensus 93 I~pH~d~~~~~lR~Hl~-----L~---------~p--~~~~~~~v~~~~~~w~~G~~~~fD~s~~H~~~N~~~~~Rv~L~ 156 (163)
T PF05118_consen 93 IKPHRDPTNLRLRLHLP-----LI---------VP--NPGCYIRVGGETRHWREGECWVFDDSFEHEVWNNGDEDRVVLI 156 (163)
T ss_dssp EEEE-SS-TTEEEEEEE-----EC-------------STTEEEEETTEEEB--CTEEEEE-TTS-EEEEESSSS-EEEEE
T ss_pred ECCeeCCCCcceEEEEE-----EE---------cC--CCCeEEEECCeEEEeccCcEEEEeCCEEEEEEeCCCCCEEEEE
Confidence 788888875 444442 11 11 23345556666777777753 5778999998889998876
Q ss_pred E
Q 019160 290 Y 290 (345)
Q Consensus 290 ~ 290 (345)
+
T Consensus 157 v 157 (163)
T PF05118_consen 157 V 157 (163)
T ss_dssp E
T ss_pred E
Confidence 5
No 52
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=32.43 E-value=1.1e+02 Score=25.36 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhhcceEEEEcC-CCCHHHHHHHHHHHHH
Q 019160 60 RAASAKAMCRASSEWGFFQVVNH-GISPELLRKMRKEQEL 98 (345)
Q Consensus 60 r~~~~~~l~~A~~~~GfF~l~nh-Gi~~e~~~~~~~~~~~ 98 (345)
+..+++++.+.++++.++++.++ |++...+.++....+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 55678899999999988888765 7988888777766543
No 53
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=32.28 E-value=56 Score=29.09 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=27.0
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
.||++.+.... + .++++.+.+++.+...+.+.|||+
T Consensus 122 ~v~~~~y~~~g--s----~~la~~~~~~l~~~~~vLl~nHGv 157 (215)
T PRK08087 122 SIPCAPYATFG--T----RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_pred CceeecCCCCC--C----HHHHHHHHHHhCcCCEEEecCCCC
Confidence 58888876543 2 234667888888888999999995
No 54
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=31.96 E-value=23 Score=32.50 Aligned_cols=84 Identities=17% Similarity=0.177 Sum_probs=44.9
Q ss_pred hhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHHHHH
Q 019160 11 HHFEKLLRHPDEISTPKRHDCHQQNGIMMEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPELLR 90 (345)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~ 90 (345)
.+++.|++.+|.+..+|++....+.....-...+|+| +.. ..-+.++ +++|.++.+..|.++..|..+..-++.
T Consensus 52 ~dl~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vv-igt-tG~s~~~----~~~l~~aa~~~~v~~s~n~s~g~~~~~ 125 (257)
T PRK00048 52 DDLEAVLADADVLIDFTTPEATLENLEFALEHGKPLV-IGT-TGFTEEQ----LAELEEAAKKIPVVIAPNFSIGVNLLM 125 (257)
T ss_pred CCHHHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEE-EEC-CCCCHHH----HHHHHHHhcCCCEEEECcchHHHHHHH
Confidence 4556666666666666644433222223334556666 221 1112222 345666667778888777777666666
Q ss_pred HHHHHHHHhh
Q 019160 91 KMRKEQELLF 100 (345)
Q Consensus 91 ~~~~~~~~fF 100 (345)
++...+-..|
T Consensus 126 ~l~~~aa~~l 135 (257)
T PRK00048 126 KLAEKAAKYL 135 (257)
T ss_pred HHHHHHHHhc
Confidence 6555554443
No 55
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=30.78 E-value=27 Score=30.00 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=27.6
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhh-hcceEEEEcCCC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASS-EWGFFQVVNHGI 84 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~-~~GfF~l~nhGi 84 (345)
..+|++++.... ++ ++++.+.++++ +...+.+.|||+
T Consensus 122 ~~v~~~~~~~~~--~~----~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAPPG--SE----ELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THSTT--CH----HHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeecccccc--ch----hhhhhhhhhhcCCceEEeecCCce
Confidence 679999987643 22 23567888888 889999999995
No 56
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=30.15 E-value=63 Score=27.86 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=25.8
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
..||++ +... ++ .++++.+.+++.+.-.+.|.|||+
T Consensus 114 ~~ipv~-~~~~--~~----~~la~~v~~~l~~~~~vll~nHG~ 149 (181)
T PRK08660 114 GTIPVV-GGDI--GS----GELAENVARALSEHKGVVVRGHGT 149 (181)
T ss_pred CCEeEE-eCCC--CC----HHHHHHHHHHHhhCCEEEEcCCCc
Confidence 358888 4332 22 234667888999989999999995
No 57
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=29.82 E-value=73 Score=21.99 Aligned_cols=29 Identities=14% Similarity=0.303 Sum_probs=17.1
Q ss_pred ceEecCCCCCCCHHHHHHHHHHHHHHhhh
Q 019160 45 PLIDLIGLNSHDERERAASAKAMCRASSE 73 (345)
Q Consensus 45 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 73 (345)
|+|.+.-+...+++.+.++++.|.+|+.+
T Consensus 2 P~i~i~~~~Grs~EqK~~L~~~it~a~~~ 30 (60)
T PRK02289 2 PFVRIDLFEGRSQEQKNALAREVTEVVSR 30 (60)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 55555444434666777777666666554
No 58
>PF09243 Rsm22: Mitochondrial small ribosomal subunit Rsm22; InterPro: IPR015324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Rsm22 has been identified as a mitochondrial small ribosomal subunit [] and is a methyltransferase. In Schizosaccharomyces pombe (Fission yeast), Rsm22 is tandemly fused to Cox11 (a factor required for copper insertion into cytochrome oxidase) and the two proteins are proteolytically cleaved after import into the mitochondria []. This entry consists of mitochondrial Rsm22 and homologous sequences from bacteria.; GO: 0008168 methyltransferase activity, 0006412 translation
Probab=28.47 E-value=1.7e+02 Score=27.15 Aligned_cols=91 Identities=12% Similarity=0.162 Sum_probs=50.7
Q ss_pred cCCCCCchhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcC
Q 019160 3 VDSNPPLVHHFEKLLRHPDEISTPKRHDCHQQNGIMMEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNH 82 (345)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nh 82 (345)
||..+....--+.|++..........+..-......+...+|-++.+.-..-.+ ++|.+++++|.+.+.. ++.|+-+
T Consensus 64 vd~s~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~DLvi~s~~L~EL~~-~~r~~lv~~LW~~~~~--~LVlVEp 140 (274)
T PF09243_consen 64 VDRSPEMLELAKRLLRAGPNNRNAEWRRVLYRDFLPFPPDDLVIASYVLNELPS-AARAELVRSLWNKTAP--VLVLVEP 140 (274)
T ss_pred ecCCHHHHHHHHHHHhcccccccchhhhhhhcccccCCCCcEEEEehhhhcCCc-hHHHHHHHHHHHhccC--cEEEEcC
Confidence 455555555555566554433222111111111233334466666665443344 7888888888888765 9999999
Q ss_pred CCCH--HHHHHHHHHHHHhh
Q 019160 83 GISP--ELLRKMRKEQELLF 100 (345)
Q Consensus 83 Gi~~--e~~~~~~~~~~~fF 100 (345)
|.+. +.+.+ +|+++
T Consensus 141 Gt~~Gf~~i~~----aR~~l 156 (274)
T PF09243_consen 141 GTPAGFRRIAE----ARDQL 156 (274)
T ss_pred CChHHHHHHHH----HHHHH
Confidence 9874 34444 45554
No 59
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=28.23 E-value=64 Score=30.03 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=26.4
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
.||++++... ++. ++++.+.+++++...+.|.|||+
T Consensus 179 ~i~vvpy~~p--gs~----eLa~~v~~~l~~~~avLL~nHGv 214 (274)
T PRK03634 179 GVGIVPWMVP--GTD----EIGQATAEKMQKHDLVLWPKHGV 214 (274)
T ss_pred ceeEecCCCC--CCH----HHHHHHHHHhccCCEEEEcCCCC
Confidence 4778777643 222 34667888888889999999995
No 60
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=27.90 E-value=1.9e+02 Score=24.20 Aligned_cols=41 Identities=17% Similarity=0.174 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhhhcceEEEEcC-CCCHHHHHHHHHHHHH
Q 019160 58 RERAASAKAMCRASSEWGFFQVVNH-GISPELLRKMRKEQEL 98 (345)
Q Consensus 58 ~~r~~~~~~l~~A~~~~GfF~l~nh-Gi~~e~~~~~~~~~~~ 98 (345)
+++.++++++.+.+++..+++++++ |++...+.++....+.
T Consensus 3 ~~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 3 EKKEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 3566778889999999887777665 7888888777766553
No 61
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=27.18 E-value=99 Score=28.73 Aligned_cols=36 Identities=17% Similarity=0.154 Sum_probs=26.9
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
.||++.+... |+ .++++.+.+++++..-+.|.|||+
T Consensus 177 ~i~vvp~~~p--Gs----~eLA~~v~~~l~~~~avLL~nHGv 212 (270)
T TIGR02624 177 GVGIIPWMVP--GT----NEIGEATAEKMKEHRLVLWPHHGI 212 (270)
T ss_pred ccccccCcCC--CC----HHHHHHHHHHhccCCEEEEcCCCC
Confidence 4777766653 22 245778889999989999999995
No 62
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=27.00 E-value=72 Score=28.35 Aligned_cols=36 Identities=11% Similarity=0.236 Sum_probs=25.6
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
.||++.+.... + .++++.+.+++.+...+.|.|||+
T Consensus 121 ~i~~v~y~~~g--s----~~la~~v~~~~~~~~~vLL~nHG~ 156 (214)
T TIGR01086 121 NIPCVPYATFG--S----TKLASEVVAGILKSKAILLLHHGL 156 (214)
T ss_pred CccccCCCCCC--h----HHHHHHHHHHhhhCCEEehhcCCC
Confidence 36777666543 2 234667788888889999999995
No 63
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=26.93 E-value=86 Score=21.38 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=17.2
Q ss_pred ceEecCCCCCCCHHHHHHHHHHHHHHhhh
Q 019160 45 PLIDLIGLNSHDERERAASAKAMCRASSE 73 (345)
Q Consensus 45 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 73 (345)
|+|.+.-+...+.+.+.++++.|.+++.+
T Consensus 2 P~i~i~~~~Grs~eqk~~l~~~it~~l~~ 30 (61)
T PRK02220 2 PYVHIKLIEGRTEEQLKALVKDVTAAVSK 30 (61)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 55555444334566777777777666553
No 64
>PRK06661 hypothetical protein; Provisional
Probab=26.83 E-value=76 Score=28.66 Aligned_cols=71 Identities=11% Similarity=-0.004 Sum_probs=39.6
Q ss_pred hhhhhhhhCCCCCCCCCCCCCCCCC----CCCCCC---------CCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcce
Q 019160 10 VHHFEKLLRHPDEISTPKRHDCHQQ----NGIMME---------ECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGF 76 (345)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~Gf 76 (345)
.-|..+....||.--++=.||+-.+ .+..+. -..||..++......+ .+.++.+.+++.+...
T Consensus 77 ~lH~~IY~~rpdv~aVvH~H~~~a~a~s~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~a~~l~~~~a 152 (231)
T PRK06661 77 FIHGSIYKTRPDISAIFHYHTPASIAVSALKCGLLPISQWALHFYDRISYHNYNSLALDA----DKQSSRLVNDLKQNYV 152 (231)
T ss_pred HHHHHHHHcCCCCCEEEEECChHHHHHHhcCCCCCCccHhHHHHcCCceecCCCccccCc----hhHHHHHHHHhCCCCE
Confidence 4456666677887666432433111 011111 1235655555443211 2335678888999999
Q ss_pred EEEEcCCC
Q 019160 77 FQVVNHGI 84 (345)
Q Consensus 77 F~l~nhGi 84 (345)
+.|.|||+
T Consensus 153 vll~nHG~ 160 (231)
T PRK06661 153 MLLRNHGA 160 (231)
T ss_pred EEECCCCC
Confidence 99999995
No 65
>TIGR01921 DAP-DH diaminopimelate dehydrogenase. This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.
Probab=26.23 E-value=71 Score=30.58 Aligned_cols=72 Identities=17% Similarity=0.056 Sum_probs=46.1
Q ss_pred hhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCCCHH
Q 019160 12 HFEKLLRHPDEISTPKRHDCHQQNGIMMEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGISPE 87 (345)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~e 87 (345)
+...++..+|.....+|+.+..+.....-.+.+-|||-.......++ ..++|.+||++.|=.-|+.-|+++.
T Consensus 53 d~~e~l~~iDVViIctPs~th~~~~~~~L~aG~NVV~s~~~h~~~p~----~~~~ld~AAk~~g~vsvi~~GwDPG 124 (324)
T TIGR01921 53 DDEKHLDDVDVLILCMGSATDIPEQAPYFAQFANTVDSFDNHRDIPR----HRQVMDAAAKAAGNVSVISTGWDPG 124 (324)
T ss_pred CHHHhccCCCEEEEcCCCccCHHHHHHHHHcCCCEEECCCcccCCHH----HHHHHHHHHHHcCCEEEEECCCCcC
Confidence 34455566777766676666533233333466888887654322233 3568999999988778877898873
No 66
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=26.22 E-value=61 Score=22.15 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=14.6
Q ss_pred ceEecCCCCCCCHHHHHHHHHHHHHHhhh
Q 019160 45 PLIDLIGLNSHDERERAASAKAMCRASSE 73 (345)
Q Consensus 45 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 73 (345)
|+|.+.-....+.+.+.+++++|.+++.+
T Consensus 1 P~I~i~~~~g~~~e~K~~l~~~it~~~~~ 29 (60)
T PF01361_consen 1 PFITIKIPEGRTAEQKRELAEAITDAVVE 29 (60)
T ss_dssp -EEEEEEESTS-HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 44555444333556666666666655544
No 67
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=26.21 E-value=69 Score=28.58 Aligned_cols=37 Identities=22% Similarity=0.281 Sum_probs=26.0
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHh--hhcceEEEEcCCC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRAS--SEWGFFQVVNHGI 84 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~--~~~GfF~l~nhGi 84 (345)
..||++.+.... +. ++++++.+++ .+...+.|.|||+
T Consensus 129 ~~ip~~~y~~~g--~~----ela~~i~~~l~~~~~~~vll~nHG~ 167 (221)
T PRK06557 129 GPIPVGPFALIG--DE----AIGKGIVETLKGGRSPAVLMQNHGV 167 (221)
T ss_pred CCeeccCCcCCC--cH----HHHHHHHHHhCcCCCCEEEECCCCc
Confidence 458887776442 22 3456778888 6778899999995
No 68
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=26.08 E-value=1.2e+02 Score=25.71 Aligned_cols=40 Identities=13% Similarity=0.216 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhhhcceEEEE-cCCCCHHHHHHHHHHHHH
Q 019160 59 ERAASAKAMCRASSEWGFFQVV-NHGISPELLRKMRKEQEL 98 (345)
Q Consensus 59 ~r~~~~~~l~~A~~~~GfF~l~-nhGi~~e~~~~~~~~~~~ 98 (345)
++.+.+++|.+.+.++-.++|+ .+|++...++++....+.
T Consensus 2 ~K~~~v~~l~e~l~~y~~v~iv~~~gl~~~ql~~iR~~lr~ 42 (163)
T cd05796 2 LKQKLVENIREAVDKYKYIYVFSVDNMRNNKLKDIRQEWKD 42 (163)
T ss_pred hHHHHHHHHHHHHHhCCEEEEEEecCCCHHHHHHHHHHhcC
Confidence 4667789999999998866666 568999999988877654
No 69
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=25.47 E-value=91 Score=21.38 Aligned_cols=28 Identities=11% Similarity=0.329 Sum_probs=13.9
Q ss_pred ceEecCCC-CCCCHHHHHHHHHHHHHHhh
Q 019160 45 PLIDLIGL-NSHDERERAASAKAMCRASS 72 (345)
Q Consensus 45 PvIDl~~l-~~~d~~~r~~~~~~l~~A~~ 72 (345)
|+|.+.-+ ...+++.+.++++.|.+++.
T Consensus 1 P~i~i~i~~~grt~eqK~~l~~~it~~l~ 29 (63)
T TIGR00013 1 PFVNIYILKEGRTDEQKRQLIEGVTEAMA 29 (63)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 44555444 22345555555555555544
No 70
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=25.29 E-value=88 Score=29.36 Aligned_cols=30 Identities=27% Similarity=0.458 Sum_probs=24.8
Q ss_pred HHHHHhhhcceEEEEcCCCCHHHHHHHHHHHH
Q 019160 66 AMCRASSEWGFFQVVNHGISPELLRKMRKEQE 97 (345)
Q Consensus 66 ~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~ 97 (345)
...+++++.|||.|.| +|..++.++.+...
T Consensus 16 ~Al~~lED~Gy~cvDN--lP~~Ll~~l~~~~~ 45 (284)
T PF03668_consen 16 TALRALEDLGYYCVDN--LPPSLLPQLIELLA 45 (284)
T ss_pred HHHHHHHhcCeeEEcC--CcHHHHHHHHHHHH
Confidence 3478899999999998 78888888877655
No 71
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=24.49 E-value=1e+02 Score=21.10 Aligned_cols=29 Identities=10% Similarity=0.224 Sum_probs=16.5
Q ss_pred ceEecCCCCCCCHHHHHHHHHHHHHHhhh
Q 019160 45 PLIDLIGLNSHDERERAASAKAMCRASSE 73 (345)
Q Consensus 45 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 73 (345)
|+|.+.-....+.+.+.++++.|.+++.+
T Consensus 2 P~i~I~~~~grs~eqk~~l~~~it~~l~~ 30 (62)
T PRK00745 2 PTFHIELFEGRTVEQKRKLVEEITRVTVE 30 (62)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 55555544334566666666666665443
No 72
>PRK06357 hypothetical protein; Provisional
Probab=24.37 E-value=1e+02 Score=27.51 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=24.5
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhc------ceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEW------GFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~------GfF~l~nhGi 84 (345)
.||++.+.... + .++++.+.+++++. ..+.|.|||+
T Consensus 130 ~i~~~p~~~~g--s----~ela~~v~~~l~~~~~~~~~~~vLl~nHGv 171 (216)
T PRK06357 130 KIPTLPFAPAT--S----PELAEIVRKHLIELGDKAVPSAFLLNSHGI 171 (216)
T ss_pred CcceecccCCC--c----HHHHHHHHHHHhhcCcccCCCEEEECCCCC
Confidence 47887776542 2 34566777777664 5889999995
No 73
>PRK00099 rplJ 50S ribosomal protein L10; Reviewed
Probab=24.30 E-value=2.4e+02 Score=24.05 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhhhcceEEEEcC-CCCHHHHHHHHHHHHH
Q 019160 58 RERAASAKAMCRASSEWGFFQVVNH-GISPELLRKMRKEQEL 98 (345)
Q Consensus 58 ~~r~~~~~~l~~A~~~~GfF~l~nh-Gi~~e~~~~~~~~~~~ 98 (345)
+++.+.+++|.+.++++-+++++++ |++...+.++....+.
T Consensus 4 ~~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 45 (172)
T PRK00099 4 EEKKEIVAELAEKLKKAQSAVVADYRGLTVAQMTELRKKLRE 45 (172)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 3566778888888888876666654 7887777777766554
No 74
>PRK05834 hypothetical protein; Provisional
Probab=23.56 E-value=93 Score=27.32 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=24.3
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhcc--eEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEWG--FFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~G--fF~l~nhGi 84 (345)
+||++++.... + ..+.+++.+.+++++.. .+-|.|||+
T Consensus 121 ~ipv~~~~~~~--~--~~~~la~~v~~~l~~~~~~avLL~nHGv 160 (194)
T PRK05834 121 EISIYDPKDFD--D--WYERADTEILRYLQEKNKNFVVIKGYGV 160 (194)
T ss_pred eeeecCccccc--h--HHHhHHHHHHHHHhhcCCCEEEEcCCcc
Confidence 37776654432 1 12234566888888755 899999995
No 75
>PF00466 Ribosomal_L10: Ribosomal protein L10; InterPro: IPR001790 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. On the basis of sequence similarities the following prokaryotic and eukaryotic ribosomal proteins can be grouped: Bacterial 50S ribosomal protein L10; Archaebacterial acidic ribosomal protein P0 homologue (L10E); Eukaryotic 60S ribosomal protein P0 (L10E). This entry represents the ribosomal protein L10P family, with includes the above mentioned ribosomal proteins.; GO: 0042254 ribosome biogenesis, 0005622 intracellular; PDB: 3A1Y_G 3D5D_J 3PYT_I 3PYV_I 3D5B_J 3PYO_I 3PYR_I 3MS1_I 3MRZ_I 1VQ9_G ....
Probab=23.38 E-value=3.3e+02 Score=20.55 Aligned_cols=42 Identities=17% Similarity=0.229 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhhhcceE-EEEcCCCCHHHHHHHHHHHHHh
Q 019160 58 RERAASAKAMCRASSEWGFF-QVVNHGISPELLRKMRKEQELL 99 (345)
Q Consensus 58 ~~r~~~~~~l~~A~~~~GfF-~l~nhGi~~e~~~~~~~~~~~f 99 (345)
+++.+.++++.+.+.++=.+ .+..+|++...+.++....+..
T Consensus 4 ~~K~~~v~~~~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~~ 46 (100)
T PF00466_consen 4 EKKEEIVEELKELLKKSKYVIVVDYNGLSANQLQELRKELRKK 46 (100)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 46777889999999998544 4456689998888888776665
No 76
>PRK04019 rplP0 acidic ribosomal protein P0; Validated
Probab=22.87 E-value=2e+02 Score=27.53 Aligned_cols=42 Identities=12% Similarity=0.242 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhhcceEEEEc-CCCCHHHHHHHHHHHHH
Q 019160 57 ERERAASAKAMCRASSEWGFFQVVN-HGISPELLRKMRKEQEL 98 (345)
Q Consensus 57 ~~~r~~~~~~l~~A~~~~GfF~l~n-hGi~~e~~~~~~~~~~~ 98 (345)
++++.+.+.+|.+.+.++..++|++ +|++...+++++...+.
T Consensus 5 ~e~K~~~v~el~~~l~~~~~v~iv~~~gl~~~ql~~lR~~lr~ 47 (330)
T PRK04019 5 PEWKKEEVEELKELIKSYPVVGIVDLEGIPARQLQEIRRKLRG 47 (330)
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHHc
Confidence 4678888999999999998888876 58999888888877664
No 77
>PF11043 DUF2856: Protein of unknown function (DUF2856); InterPro: IPR020500 This phage protein modulates the activity of the host recBCD nuclease and thus protects the linear double stranded DNA from exonuclease degradation [].
Probab=22.47 E-value=1.1e+02 Score=22.89 Aligned_cols=24 Identities=25% Similarity=0.440 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHhhCCCHHHHhh
Q 019160 86 PELLRKMRKEQELLFKTPFERKAT 109 (345)
Q Consensus 86 ~e~~~~~~~~~~~fF~lP~e~K~~ 109 (345)
.|+++.+...-..|.+||.|.|..
T Consensus 20 sEVL~~~k~N~D~~~aL~~ETKaE 43 (97)
T PF11043_consen 20 SEVLDNIKNNYDAFMALPPETKAE 43 (97)
T ss_pred HHHHHHHHHHHHHHHcCChhhHHH
Confidence 578888888899999999999865
No 78
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=22.37 E-value=2.2e+02 Score=28.24 Aligned_cols=55 Identities=20% Similarity=0.179 Sum_probs=41.7
Q ss_pred EecCCCC-CCCHHHHHHHHHHHHHH------------hhhcceEEEEcCCCCHHHHHHHHHHHHHhhC
Q 019160 47 IDLIGLN-SHDERERAASAKAMCRA------------SSEWGFFQVVNHGISPELLRKMRKEQELLFK 101 (345)
Q Consensus 47 IDl~~l~-~~d~~~r~~~~~~l~~A------------~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~ 101 (345)
+||+.+. +.+-++-.++-++|..+ |.+.|.|.|+.....++++.-+++..+.|-+
T Consensus 393 vDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 393 VDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred EEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 7888875 34444445566777777 9999999999999999988866766666654
No 79
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=22.36 E-value=50 Score=30.48 Aligned_cols=84 Identities=12% Similarity=0.094 Sum_probs=43.8
Q ss_pred hhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhh--cceEEEEcCCCCHHH
Q 019160 11 HHFEKLLRHPDEISTPKRHDCHQQNGIMMEECQLPLIDLIGLNSHDERERAASAKAMCRASSE--WGFFQVVNHGISPEL 88 (345)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~--~GfF~l~nhGi~~e~ 88 (345)
.+++.|...+|++..+|++.+........-...+|+|--.. .-+++ ..++|.++|++ .++++--|-.+.--+
T Consensus 60 ~d~~~l~~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigtt--g~~~e----~~~~l~~aA~~~g~~v~~a~NfSlGv~l 133 (266)
T TIGR00036 60 DDLEAVETDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTT--GFSEE----DKQELADLAEKAGIAAVIAPNFSIGVNL 133 (266)
T ss_pred CCHHHhcCCCCEEEECCChHHHHHHHHHHHHCCCCEEEECC--CCCHH----HHHHHHHHHhcCCccEEEECcccHHHHH
Confidence 44555544466666666444433222222234466654332 11222 24577777777 446666666666666
Q ss_pred HHHHHHHHHHhh
Q 019160 89 LRKMRKEQELLF 100 (345)
Q Consensus 89 ~~~~~~~~~~fF 100 (345)
+.++.+.+..+|
T Consensus 134 l~~~~~~aa~~l 145 (266)
T TIGR00036 134 MFKLLEKAAKYL 145 (266)
T ss_pred HHHHHHHHHHhc
Confidence 666666655554
No 80
>cd05795 Ribosomal_P0_L10e Ribosomal protein L10 family, P0 and L10e subfamily; composed of eukaryotic 60S ribosomal protein P0 and the archaeal P0 homolog, L10e. P0 or L10e forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-interacting protein (WIP). These eukaryotic and archaeal P0 sequences have an additional C-terminal domain homologous with acidic proteins P1 and P2.
Probab=22.31 E-value=1.8e+02 Score=25.04 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhhhcceEEEEc-CCCCHHHHHHHHHHHHH
Q 019160 59 ERAASAKAMCRASSEWGFFQVVN-HGISPELLRKMRKEQEL 98 (345)
Q Consensus 59 ~r~~~~~~l~~A~~~~GfF~l~n-hGi~~e~~~~~~~~~~~ 98 (345)
++.+.+++|.+.+.++..++|++ .|++...++++....++
T Consensus 2 ~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 42 (175)
T cd05795 2 WKKEYVEKLTELLKSYPKVLIVDADNVGSKQLQKIRRSLRG 42 (175)
T ss_pred hHHHHHHHHHHHHHhCCEEEEEEecCCChHHHHHHHHHhhC
Confidence 45677889999999998777765 58999888888877664
No 81
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=22.05 E-value=80 Score=27.83 Aligned_cols=39 Identities=10% Similarity=0.122 Sum_probs=27.4
Q ss_pred CCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcCCC
Q 019160 42 CQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNHGI 84 (345)
Q Consensus 42 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 84 (345)
..||++++.....++ .+++..+.+++.+.-.+.|.|||+
T Consensus 121 ~~ip~~~~~~~~~~~----~~la~~~~~~l~~~~~vll~nHG~ 159 (209)
T cd00398 121 GDIPCTPYMTPETGE----DEIGTQRALGFPNSKAVLLRNHGL 159 (209)
T ss_pred CCeeecCCcCCCccH----HHHHHHHhcCCCcCCEEEEcCCCC
Confidence 468999887653121 233456677778888999999995
No 82
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=21.70 E-value=70 Score=23.84 Aligned_cols=21 Identities=19% Similarity=0.300 Sum_probs=17.1
Q ss_pred HHHHHHhhhcceEEEEcCCCC
Q 019160 65 KAMCRASSEWGFFQVVNHGIS 85 (345)
Q Consensus 65 ~~l~~A~~~~GfF~l~nhGi~ 85 (345)
+.+.+-|-+.||.||.-|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 368889999999999777543
No 83
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=21.16 E-value=7.7 Score=30.54 Aligned_cols=69 Identities=17% Similarity=0.144 Sum_probs=38.1
Q ss_pred chhhhhhhhC--CCCCCCCCCCCCCCCCCCCCCCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEEcC
Q 019160 9 LVHHFEKLLR--HPDEISTPKRHDCHQQNGIMMEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVVNH 82 (345)
Q Consensus 9 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nh 82 (345)
...+++.|+. .+|.+.+.||+..+.+.....-...++|+ +.+-...+.++ +++|.+++++.|-...+||
T Consensus 50 ~~~~~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l~~g~~v~-~EKP~~~~~~~----~~~l~~~a~~~~~~~~Vg~ 120 (120)
T PF01408_consen 50 VYTDLEELLADEDVDAVIIATPPSSHAEIAKKALEAGKHVL-VEKPLALTLEE----AEELVEAAKEKGVKVMVGY 120 (120)
T ss_dssp EESSHHHHHHHTTESEEEEESSGGGHHHHHHHHHHTTSEEE-EESSSSSSHHH----HHHHHHHHHHHTSCEEEE-
T ss_pred chhHHHHHHHhhcCCEEEEecCCcchHHHHHHHHHcCCEEE-EEcCCcCCHHH----HHHHHHHHHHhCCEEEEeC
Confidence 3455666666 56677777776664331222223445655 33333233333 5678888888887766664
No 84
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=20.94 E-value=1.3e+02 Score=27.20 Aligned_cols=42 Identities=12% Similarity=0.072 Sum_probs=24.6
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhhhc-------ceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASSEW-------GFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~-------GfF~l~nhGi 84 (345)
.||++++..-.+-......+.++.+.+++++. ..+.|.|||+
T Consensus 124 ~ip~~~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~ 172 (231)
T PRK08193 124 DIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGP 172 (231)
T ss_pred CcceecCCCcccccccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCc
Confidence 57887754321100001124566788888764 4788999995
No 85
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=20.93 E-value=4e+02 Score=23.58 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=15.2
Q ss_pred ccceeecCCCCceEEEEEeeC
Q 019160 273 VEHKVMANGKMERYSVAYFLC 293 (345)
Q Consensus 273 ~~HRVv~~~~~~R~Si~~F~~ 293 (345)
++|+|..-...+|+.+.|...
T Consensus 160 SlH~VtPVTRg~R~asffW~q 180 (229)
T COG3128 160 SLHEVTPVTRGERFASFFWIQ 180 (229)
T ss_pred cceeccccccCceEEEeeehH
Confidence 579997665678988766654
No 86
>COG3384 Aromatic ring-opening dioxygenase, catalytic LigB subunit related enzyme [Amino acid transport and metabolism]
Probab=20.35 E-value=2.2e+02 Score=26.50 Aligned_cols=77 Identities=13% Similarity=0.214 Sum_probs=45.1
Q ss_pred CCCCchhhhhhhhCCCCCCCCCCCCCC-CCC--CCCC-CCCCCCceEecCCCCCCCHHHHHHHHHHHHHHhhhcceEEEE
Q 019160 5 SNPPLVHHFEKLLRHPDEISTPKRHDC-HQQ--NGIM-MEECQLPLIDLIGLNSHDERERAASAKAMCRASSEWGFFQVV 80 (345)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~ 80 (345)
.+|-|++-+..|+.-..+-.+.+...- +.+ ..+. -+.++||||-+|-...-.++...++.++|+++-.+ | ..|+
T Consensus 90 G~peLa~~i~~~l~~~~v~a~~~~~gLDHGtwvpL~~M~PdadipVV~iSi~~~~~~~~h~~lG~al~~lree-~-vlil 167 (268)
T COG3384 90 GSPELAQRIVELLAKLGVPADAPSWGLDHGTWVPLRYMFPDADIPVVQISIDCTLSPADHYELGRALRKLREE-G-VLIL 167 (268)
T ss_pred CCHHHHHHHHHHhcccCccccCCccCCCccceeeehhhCCccCCcEEEEecCCCCCHHHHHHHHHHHHHHHhC-C-EEEE
Confidence 356666777777663322222200100 110 1222 23589999999988765677777788888888777 5 5555
Q ss_pred cCC
Q 019160 81 NHG 83 (345)
Q Consensus 81 nhG 83 (345)
..|
T Consensus 168 aSG 170 (268)
T COG3384 168 ASG 170 (268)
T ss_pred ecC
Confidence 555
No 87
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=20.31 E-value=3e+02 Score=18.84 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=24.1
Q ss_pred EeeCCCCce-EEEe-CCeEEEecCCCCcEEEEccccchhhcC
Q 019160 228 LYQDQVGGL-QLMK-DSKWVAVRPNPDALIVNIGDLFQAWSN 267 (345)
Q Consensus 228 L~qd~~~GL-qV~~-~g~W~~V~p~~g~liVnvGd~L~~~Tn 267 (345)
+-....+|| ||.- +|+-+.+.+....+++ |+++...++
T Consensus 17 v~~spi~GlyeV~~~~~~i~Y~~~dg~yli~--G~l~d~~~~ 56 (57)
T PF10411_consen 17 VSPSPIPGLYEVVLKGGGILYVDEDGRYLIQ--GQLYDLKTK 56 (57)
T ss_dssp EEE-SSTTEEEEEE-TTEEEEEETTSSEEEE--S-EEE-TTT
T ss_pred EEcCCCCCeEEEEECCCeEEEEcCCCCEEEE--eEEEecCCC
Confidence 334457786 5654 8888888876666655 999887765
No 88
>PRK15331 chaperone protein SicA; Provisional
Probab=20.26 E-value=1.1e+02 Score=26.39 Aligned_cols=43 Identities=16% Similarity=0.181 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhhhcceEEEEcCCCCHHHHHHHHHHHHHhhCC
Q 019160 59 ERAASAKAMCRASSEWGFFQVVNHGISPELLRKMRKEQELLFKT 102 (345)
Q Consensus 59 ~r~~~~~~l~~A~~~~GfF~l~nhGi~~e~~~~~~~~~~~fF~l 102 (345)
+..++++.|.+|+.+-| =.-.-|||+++.++.++..+..||..
T Consensus 8 ~~~~~~~~i~~al~~G~-tlk~l~gis~~~le~iY~~Ay~~y~~ 50 (165)
T PRK15331 8 SEERVAEMIWDAVSEGA-TLKDVHGIPQDMMDGLYAHAYEFYNQ 50 (165)
T ss_pred hHHHHHHHHHHHHHCCC-CHHHHhCCCHHHHHHHHHHHHHHHHC
Confidence 44566788999998843 23335899999999999999999964
No 89
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=20.22 E-value=1.3e+02 Score=26.15 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=24.4
Q ss_pred CCceEecCCCCCCCHHHHHHHHHHHHHHhh---hcceEEEEcCCC
Q 019160 43 QLPLIDLIGLNSHDERERAASAKAMCRASS---EWGFFQVVNHGI 84 (345)
Q Consensus 43 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~---~~GfF~l~nhGi 84 (345)
.||+++. ..+. .++++.+.++++ +...+.|.|||+
T Consensus 126 ~vp~~~~---~~gs----~ela~~~~~~l~~~~~~~avll~nHGv 163 (193)
T TIGR03328 126 TIPIFEN---TQDI----ARLADSVAPYLEAYPDVPGVLIRGHGL 163 (193)
T ss_pred EEeeecC---CCCh----HHHHHHHHHHHhcCCCCCEEEEcCCcc
Confidence 4788863 2222 345678888885 478999999995
Done!