Query 019162
Match_columns 345
No_of_seqs 271 out of 2581
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 07:12:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019162.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019162hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 3.4E-89 7.4E-94 646.4 34.5 321 22-344 1-348 (371)
2 PRK14288 chaperone protein Dna 100.0 8.1E-79 1.8E-83 589.5 34.3 317 24-344 2-343 (369)
3 PRK14296 chaperone protein Dna 100.0 3.2E-78 6.8E-83 585.6 35.5 318 24-345 3-360 (372)
4 PRK14286 chaperone protein Dna 100.0 8.2E-77 1.8E-81 576.1 34.8 319 24-345 3-356 (372)
5 PTZ00037 DnaJ_C chaperone prot 100.0 4E-77 8.6E-82 583.5 32.5 311 20-345 23-365 (421)
6 PRK14278 chaperone protein Dna 100.0 4.2E-76 9.1E-81 572.3 36.5 319 24-344 2-348 (378)
7 PRK14298 chaperone protein Dna 100.0 4E-76 8.6E-81 571.9 35.4 318 24-344 4-349 (377)
8 PRK14285 chaperone protein Dna 100.0 7.3E-76 1.6E-80 568.2 35.4 319 24-345 2-352 (365)
9 PRK14287 chaperone protein Dna 100.0 1.1E-75 2.4E-80 568.0 35.7 317 24-344 3-346 (371)
10 PRK14277 chaperone protein Dna 100.0 8.3E-76 1.8E-80 572.0 35.0 321 23-344 3-363 (386)
11 PRK14280 chaperone protein Dna 100.0 8.3E-76 1.8E-80 570.2 34.8 319 24-344 3-351 (376)
12 PRK14276 chaperone protein Dna 100.0 1.7E-75 3.6E-80 568.8 34.9 318 24-344 3-354 (380)
13 PRK14297 chaperone protein Dna 100.0 4.7E-75 1E-79 565.9 36.0 320 24-345 3-357 (380)
14 PRK14282 chaperone protein Dna 100.0 1.1E-74 2.4E-79 561.3 35.5 322 24-345 3-362 (369)
15 PRK14281 chaperone protein Dna 100.0 2.3E-74 5E-79 563.3 35.4 319 24-344 2-370 (397)
16 PRK14279 chaperone protein Dna 100.0 2E-74 4.3E-79 562.6 34.4 320 23-345 7-377 (392)
17 PRK14301 chaperone protein Dna 100.0 3.4E-74 7.3E-79 558.0 35.2 317 24-344 3-348 (373)
18 PRK14284 chaperone protein Dna 100.0 4.6E-74 1E-78 560.6 34.3 317 25-344 1-364 (391)
19 PRK14295 chaperone protein Dna 100.0 6.8E-74 1.5E-78 558.3 34.6 318 23-345 7-371 (389)
20 PRK10767 chaperone protein Dna 100.0 9.2E-74 2E-78 555.8 34.9 318 24-345 3-347 (371)
21 PRK14294 chaperone protein Dna 100.0 2.2E-73 4.8E-78 551.7 34.7 317 23-345 2-349 (366)
22 PRK14290 chaperone protein Dna 100.0 4.6E-72 1E-76 542.3 36.4 318 24-345 2-355 (365)
23 PRK14300 chaperone protein Dna 100.0 2.8E-72 6.1E-77 544.7 34.4 317 24-344 2-350 (372)
24 PRK14291 chaperone protein Dna 100.0 5.7E-72 1.2E-76 544.3 34.8 317 24-344 2-368 (382)
25 TIGR02349 DnaJ_bact chaperone 100.0 4.8E-72 1E-76 541.1 33.7 317 26-345 1-352 (354)
26 PRK14283 chaperone protein Dna 100.0 9.6E-72 2.1E-76 542.4 33.7 318 22-344 2-354 (378)
27 PRK14289 chaperone protein Dna 100.0 7.3E-71 1.6E-75 537.8 34.5 321 23-345 3-363 (386)
28 PRK14292 chaperone protein Dna 100.0 1.4E-70 3.1E-75 533.5 35.4 316 25-344 2-346 (371)
29 PRK14293 chaperone protein Dna 100.0 4.3E-70 9.3E-75 530.1 32.8 318 24-345 2-353 (374)
30 KOG0712 Molecular chaperone (D 100.0 2.9E-70 6.2E-75 510.9 23.9 307 23-344 2-337 (337)
31 PRK14299 chaperone protein Dna 100.0 3.2E-63 6.8E-68 466.9 29.0 266 24-345 3-285 (291)
32 PRK10266 curved DNA-binding pr 100.0 2.8E-61 6E-66 456.9 30.1 283 24-345 3-292 (306)
33 KOG0713 Molecular chaperone (D 100.0 1.5E-52 3.2E-57 387.1 8.5 312 19-334 10-328 (336)
34 TIGR03835 termin_org_DnaJ term 100.0 3E-44 6.6E-49 360.0 26.4 159 135-330 657-816 (871)
35 KOG0715 Molecular chaperone (D 100.0 7.7E-37 1.7E-41 285.8 10.3 232 18-271 36-288 (288)
36 KOG0714 Molecular chaperone (D 99.9 1.3E-24 2.8E-29 203.7 16.8 254 24-311 2-305 (306)
37 PF01556 CTDII: DnaJ C termina 99.9 5.7E-22 1.2E-26 151.8 9.0 80 260-339 1-81 (81)
38 COG2214 CbpA DnaJ-class molecu 99.8 2.1E-19 4.5E-24 161.2 13.3 192 22-261 3-227 (237)
39 KOG0716 Molecular chaperone (D 99.8 1.1E-20 2.3E-25 170.4 4.8 73 24-96 30-102 (279)
40 KOG0691 Molecular chaperone (D 99.8 5.9E-20 1.3E-24 170.9 5.5 90 24-122 4-93 (296)
41 PTZ00341 Ring-infected erythro 99.8 1.8E-19 4E-24 185.9 7.2 75 21-96 569-643 (1136)
42 KOG0717 Molecular chaperone (D 99.8 3.4E-19 7.3E-24 170.5 5.8 77 21-97 4-81 (508)
43 KOG0718 Molecular chaperone (D 99.8 5.5E-19 1.2E-23 169.1 6.1 74 23-96 7-83 (546)
44 PF00226 DnaJ: DnaJ domain; I 99.7 2E-18 4.4E-23 126.0 4.5 63 26-88 1-64 (64)
45 KOG0624 dsRNA-activated protei 99.7 5.3E-18 1.1E-22 157.7 6.4 77 19-96 388-467 (504)
46 KOG0719 Molecular chaperone (D 99.7 5.4E-18 1.2E-22 149.4 4.8 72 22-93 11-84 (264)
47 PHA03102 Small T antigen; Revi 99.7 1.6E-17 3.5E-22 140.6 6.0 86 24-123 4-91 (153)
48 smart00271 DnaJ DnaJ molecular 99.7 1.6E-16 3.5E-21 114.2 6.8 59 25-83 1-60 (60)
49 KOG0721 Molecular chaperone (D 99.6 2.6E-16 5.7E-21 137.7 7.5 71 24-94 98-168 (230)
50 cd06257 DnaJ DnaJ domain or J- 99.6 5.3E-16 1.1E-20 109.5 6.6 55 26-80 1-55 (55)
51 KOG0722 Molecular chaperone (D 99.6 1.2E-15 2.6E-20 136.1 4.5 67 22-89 30-96 (329)
52 KOG0550 Molecular chaperone (D 99.5 1.1E-14 2.4E-19 138.4 5.4 97 16-119 364-461 (486)
53 PRK05014 hscB co-chaperone Hsc 99.5 4.7E-14 1E-18 122.8 6.0 65 25-89 1-72 (171)
54 PRK01356 hscB co-chaperone Hsc 99.5 6.8E-14 1.5E-18 121.0 5.5 65 25-89 2-71 (166)
55 PRK00294 hscB co-chaperone Hsc 99.4 1.6E-13 3.4E-18 119.3 6.3 67 23-89 2-75 (173)
56 PRK03578 hscB co-chaperone Hsc 99.4 1.6E-13 3.5E-18 119.8 6.2 66 24-89 5-77 (176)
57 KOG0720 Molecular chaperone (D 99.4 5.2E-13 1.1E-17 128.4 4.8 66 24-90 234-299 (490)
58 PTZ00100 DnaJ chaperone protei 99.3 1E-12 2.2E-17 105.9 5.3 52 24-79 64-115 (116)
59 PRK09430 djlA Dna-J like membr 99.3 3.9E-12 8.4E-17 118.4 5.7 58 24-81 199-263 (267)
60 PHA02624 large T antigen; Prov 99.2 1E-11 2.2E-16 125.1 6.4 61 23-87 9-71 (647)
61 COG5407 SEC63 Preprotein trans 99.2 9E-12 2E-16 119.4 5.4 73 23-95 96-173 (610)
62 PRK01773 hscB co-chaperone Hsc 99.0 3.3E-10 7.2E-15 98.6 5.7 64 25-88 2-72 (173)
63 PRK14282 chaperone protein Dna 99.0 6.9E-10 1.5E-14 108.2 6.3 87 131-264 272-359 (369)
64 TIGR00714 hscB Fe-S protein as 98.9 9.9E-10 2.1E-14 94.4 5.4 53 37-89 3-60 (157)
65 PRK14299 chaperone protein Dna 98.9 3.8E-09 8.2E-14 99.8 9.4 72 254-332 125-196 (291)
66 PRK14290 chaperone protein Dna 98.9 2.3E-09 5E-14 104.4 6.2 87 131-265 266-353 (365)
67 KOG1150 Predicted molecular ch 98.8 3.4E-09 7.3E-14 91.9 5.0 68 20-87 48-116 (250)
68 PF01556 CTDII: DnaJ C termina 98.8 4.3E-09 9.3E-14 80.4 5.0 72 136-254 1-74 (81)
69 COG5269 ZUO1 Ribosome-associat 98.8 4.9E-09 1.1E-13 94.9 6.0 76 16-91 34-114 (379)
70 PRK14294 chaperone protein Dna 98.8 4.8E-09 1E-13 102.2 6.0 87 131-265 260-347 (366)
71 PRK10266 curved DNA-binding pr 98.8 2.1E-08 4.5E-13 95.5 9.8 74 256-330 115-201 (306)
72 PRK14285 chaperone protein Dna 98.8 6.4E-09 1.4E-13 101.3 6.0 85 131-262 262-347 (365)
73 PRK14284 chaperone protein Dna 98.8 1.1E-08 2.4E-13 100.5 6.5 87 131-263 274-361 (391)
74 PRK10767 chaperone protein Dna 98.7 1.4E-08 3E-13 99.3 5.9 87 131-265 258-345 (371)
75 PRK14298 chaperone protein Dna 98.7 1.2E-08 2.7E-13 99.7 5.5 87 131-265 261-348 (377)
76 PRK14289 chaperone protein Dna 98.7 5.4E-08 1.2E-12 95.6 9.1 83 257-339 126-280 (386)
77 PRK14300 chaperone protein Dna 98.7 4.3E-08 9.3E-13 95.7 7.9 81 131-258 261-342 (372)
78 PRK14287 chaperone protein Dna 98.7 2.2E-08 4.7E-13 97.8 5.8 84 131-262 258-342 (371)
79 TIGR02349 DnaJ_bact chaperone 98.7 3E-08 6.5E-13 96.3 6.2 83 131-261 263-346 (354)
80 PRK14279 chaperone protein Dna 98.7 6.4E-08 1.4E-12 95.1 8.2 77 131-255 289-365 (392)
81 PRK14301 chaperone protein Dna 98.6 3.3E-08 7.2E-13 96.6 6.0 84 131-262 260-344 (373)
82 PRK14293 chaperone protein Dna 98.6 1.5E-07 3.2E-12 92.1 9.4 84 257-340 115-270 (374)
83 PRK14295 chaperone protein Dna 98.6 7.3E-08 1.6E-12 94.6 7.1 76 131-253 282-357 (389)
84 PRK14291 chaperone protein Dna 98.6 9.3E-08 2E-12 93.7 7.2 74 131-251 271-345 (382)
85 PRK14288 chaperone protein Dna 98.6 1.3E-07 2.7E-12 92.4 7.7 82 131-259 254-336 (369)
86 PRK14276 chaperone protein Dna 98.5 1.9E-07 4.2E-12 91.4 7.6 77 131-255 266-343 (380)
87 PRK14286 chaperone protein Dna 98.5 1.6E-07 3.4E-12 91.8 6.0 82 131-259 266-348 (372)
88 PRK14280 chaperone protein Dna 98.5 3.4E-07 7.3E-12 89.6 8.0 77 131-255 263-340 (376)
89 PRK14278 chaperone protein Dna 98.5 3E-07 6.6E-12 90.0 7.4 78 131-255 259-337 (378)
90 PRK14292 chaperone protein Dna 98.5 1.5E-07 3.2E-12 92.0 5.1 83 131-261 258-341 (371)
91 PRK14281 chaperone protein Dna 98.5 3.7E-07 8E-12 89.9 7.6 77 131-255 282-359 (397)
92 PRK14283 chaperone protein Dna 98.4 1.1E-06 2.3E-11 86.2 10.0 78 256-333 117-266 (378)
93 PRK14297 chaperone protein Dna 98.4 1.1E-06 2.3E-11 86.2 9.8 77 256-332 119-267 (380)
94 COG0484 DnaJ DnaJ-class molecu 98.4 4.1E-07 9E-12 87.4 5.4 81 131-259 260-341 (371)
95 PRK14277 chaperone protein Dna 98.4 1.7E-06 3.8E-11 84.9 9.6 76 256-331 126-273 (386)
96 PRK14296 chaperone protein Dna 98.3 2.1E-06 4.6E-11 83.9 9.4 77 256-332 120-268 (372)
97 KOG1789 Endocytosis protein RM 98.3 4.8E-07 1E-11 94.8 5.0 54 24-80 1280-1337(2235)
98 KOG0568 Molecular chaperone (D 98.3 6.4E-07 1.4E-11 79.6 4.2 55 25-80 47-102 (342)
99 PTZ00037 DnaJ_C chaperone prot 98.3 1.5E-06 3.2E-11 86.1 6.6 74 131-251 270-347 (421)
100 KOG0723 Molecular chaperone (D 98.3 1.9E-06 4.1E-11 67.6 5.6 50 28-81 59-108 (112)
101 TIGR03835 termin_org_DnaJ term 98.2 2.4E-06 5.3E-11 88.0 6.6 70 25-95 2-71 (871)
102 TIGR02642 phage_xxxx uncharact 97.3 0.00024 5.3E-09 62.3 4.2 46 171-228 104-149 (186)
103 KOG3192 Mitochondrial J-type c 97.1 0.00036 7.9E-09 58.7 2.9 69 20-88 3-78 (168)
104 KOG0712 Molecular chaperone (D 96.6 0.0041 8.8E-08 59.4 6.2 75 131-252 248-324 (337)
105 COG1076 DjlA DnaJ-domain-conta 96.2 0.003 6.6E-08 55.2 2.4 54 25-78 113-173 (174)
106 PF00684 DnaJ_CXXCXGXG: DnaJ c 96.1 0.0067 1.5E-07 44.2 3.4 36 170-206 19-54 (66)
107 COG1076 DjlA DnaJ-domain-conta 95.8 0.0038 8.1E-08 54.6 1.4 64 26-89 2-72 (174)
108 KOG0431 Auxilin-like protein a 94.6 0.063 1.4E-06 53.8 5.8 49 29-77 392-447 (453)
109 PF03656 Pam16: Pam16; InterP 94.4 0.081 1.8E-06 43.7 5.1 53 26-82 59-111 (127)
110 PLN03165 chaperone protein dna 94.4 0.093 2E-06 42.3 5.2 39 161-203 41-85 (111)
111 PF11833 DUF3353: Protein of u 86.4 1.5 3.2E-05 39.0 5.4 38 34-79 1-38 (194)
112 PF00684 DnaJ_CXXCXGXG: DnaJ c 86.0 0.64 1.4E-05 33.7 2.4 21 171-203 46-66 (66)
113 KOG0724 Zuotin and related mol 81.8 1.4 3.1E-05 42.3 3.6 55 36-90 3-61 (335)
114 PF13446 RPT: A repeated domai 80.2 3.7 8E-05 29.2 4.4 26 26-51 6-31 (62)
115 COG1107 Archaea-specific RecJ- 78.4 1.3 2.7E-05 45.4 1.9 9 170-178 22-30 (715)
116 PF14687 DUF4460: Domain of un 76.1 6.6 0.00014 31.7 5.2 46 35-80 4-53 (112)
117 COG5552 Uncharacterized conser 73.4 15 0.00033 27.2 5.9 37 23-59 1-37 (88)
118 PF04246 RseC_MucC: Positive r 71.2 9.4 0.0002 31.6 5.2 59 149-230 4-63 (135)
119 PF10041 DUF2277: Uncharacteri 69.0 24 0.00052 26.3 6.1 57 23-80 1-61 (78)
120 KOG2813 Predicted molecular ch 63.2 6.1 0.00013 37.5 2.7 38 171-214 239-277 (406)
121 PF07709 SRR: Seven Residue Re 58.3 6.2 0.00013 19.5 1.0 13 67-79 2-14 (14)
122 PLN03165 chaperone protein dna 56.4 7.2 0.00016 31.4 1.7 12 195-206 54-65 (111)
123 PF12991 DUF3875: Domain of un 47.0 23 0.00051 24.6 2.7 24 317-340 27-52 (54)
124 PRK10862 SoxR reducing system 47.0 46 0.001 28.3 5.3 21 208-228 48-68 (154)
125 CHL00185 ycf59 magnesium-proto 41.9 53 0.0011 31.6 5.2 74 7-80 230-306 (351)
126 COG1107 Archaea-specific RecJ- 40.6 15 0.00034 37.8 1.6 35 170-204 72-106 (715)
127 KOG3442 Uncharacterized conser 40.5 51 0.0011 27.1 4.2 50 28-81 62-111 (132)
128 PF07092 DUF1356: Protein of u 39.4 10 0.00022 34.7 0.1 16 194-209 39-54 (238)
129 COG2214 CbpA DnaJ-class molecu 37.8 1.1E+02 0.0023 26.3 6.5 70 260-331 150-219 (237)
130 PF12725 DUF3810: Protein of u 37.0 1E+02 0.0022 29.6 6.4 61 22-82 79-150 (318)
131 PRK14051 negative regulator Gr 36.9 1.9E+02 0.004 23.2 6.7 71 239-311 47-119 (123)
132 cd01047 ACSF Aerobic Cyclase S 35.9 99 0.0022 29.4 5.9 73 8-80 215-290 (323)
133 TIGR02029 AcsF magnesium-proto 35.7 81 0.0017 30.2 5.4 73 8-80 225-300 (337)
134 PRK13654 magnesium-protoporphy 34.9 76 0.0016 30.6 5.1 74 7-80 234-310 (355)
135 cd02639 R3H_RRM R3H domain of 34.6 50 0.0011 23.5 3.0 21 323-343 17-37 (60)
136 PF12791 RsgI_N: Anti-sigma fa 33.4 1E+02 0.0022 21.1 4.4 34 275-308 5-38 (56)
137 TIGR03829 YokU_near_AblA uncha 31.7 48 0.001 25.6 2.7 24 195-218 1-24 (89)
138 KOG0315 G-protein beta subunit 29.6 43 0.00093 31.1 2.4 31 263-293 18-49 (311)
139 PLN02508 magnesium-protoporphy 29.4 1.2E+02 0.0025 29.3 5.3 73 7-79 230-305 (357)
140 cd05792 S1_eIF1AD_like S1_eIF1 29.2 2.5E+02 0.0054 21.1 6.3 25 272-296 8-33 (78)
141 PF06675 DUF1177: Protein of u 28.3 1.9E+02 0.0042 26.8 6.3 91 237-328 78-179 (276)
142 PF12434 Malate_DH: Malate deh 27.9 81 0.0018 18.7 2.5 18 38-55 9-26 (28)
143 TIGR00630 uvra excinuclease AB 27.7 33 0.00072 37.8 1.7 39 170-212 740-778 (924)
144 smart00276 GLECT Galectin. Gal 26.8 1E+02 0.0023 24.9 4.2 22 212-233 2-23 (128)
145 PF08774 VRR_NUC: VRR-NUC doma 26.8 76 0.0017 24.4 3.2 26 319-344 61-87 (100)
146 cd04456 S1_IF1A_like S1_IF1A_l 25.3 2.9E+02 0.0063 20.6 6.8 26 272-297 9-34 (78)
147 PRK00349 uvrA excinuclease ABC 23.1 63 0.0014 35.8 2.7 39 170-213 742-781 (943)
148 TIGR00757 RNaseEG ribonuclease 22.8 57 0.0012 32.6 2.1 16 193-208 390-405 (414)
149 cd08394 C2A_Munc13 C2 domain f 22.3 1.2E+02 0.0027 24.9 3.7 52 244-302 60-111 (127)
150 smart00276 GLECT Galectin. Gal 22.0 1.3E+02 0.0027 24.4 3.8 41 290-330 3-49 (128)
151 KOG2813 Predicted molecular ch 21.8 30 0.00065 33.1 -0.0 11 193-203 245-255 (406)
152 PHA02613 48 baseplate subunit; 21.7 96 0.0021 29.5 3.2 17 133-149 333-349 (361)
153 COG2879 Uncharacterized small 21.7 1.6E+02 0.0035 21.2 3.6 28 45-74 27-54 (65)
154 COG5216 Uncharacterized conser 21.1 51 0.0011 23.4 1.0 13 140-152 30-42 (67)
155 cd06007 R3H_DEXH_helicase R3H 20.9 1.2E+02 0.0027 21.4 3.0 21 323-343 16-36 (59)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-89 Score=646.42 Aligned_cols=321 Identities=36% Similarity=0.625 Sum_probs=288.3
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG 101 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~ 101 (345)
++.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|+|||||||||+||++||+||..+++++.++
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g 80 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG 80 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence 35789999999999999999999999999999999999899999999999999999999999999999999988633322
Q ss_pred CCCCCCcccChhhhhhhhcCCCCC--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---------
Q 019162 102 GGRGGGMGVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK--------- 169 (345)
Q Consensus 102 ~~~~~~~~~~~~d~F~~~fg~~~~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~--------- 169 (345)
+...++|+.++.|||++|||++.. ++++++++|.|+.+.|+|||+|||+|+++++.+++.+.|+ |+|+
T Consensus 81 g~g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~ 160 (371)
T COG0484 81 GFGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPK 160 (371)
T ss_pred CCCcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCC
Confidence 211123333789999999976542 3344577999999999999999999999999999999999 9876
Q ss_pred --cCCCccceEEEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC
Q 019162 170 --RRCNCRNEVYHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI 235 (345)
Q Consensus 170 --~~C~G~G~~~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~ 235 (345)
++|+|+|++...+.. |++++.+ +++|++|+|.|++.+.++++|+||+|+.+|++|+++|+|++.+
T Consensus 161 tC~tC~G~G~v~~~~~~-g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~ 239 (371)
T COG0484 161 TCPTCNGSGQVRTVQRT-GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGP 239 (371)
T ss_pred cCCCCCCcCeEEEEEee-eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCC
Confidence 579999996655433 5555433 8899999999999999999999999999999999999999965
Q ss_pred -CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCC
Q 019162 236 -DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS 314 (345)
Q Consensus 236 -~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~ 314 (345)
++++|||||+|+|++|+.|.|+|+||+++++||+.+|++|+++.|+||||+ ++|+||+++++|+++||+|+|||...+
T Consensus 240 ~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~~~ 318 (371)
T COG0484 240 NGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLRS 318 (371)
T ss_pred CCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCccccCC
Confidence 677899999999999999999999999999999999999999999999998 999999999999999999999998777
Q ss_pred CCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 315 NKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 315 ~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
..+|||||+|+|.+|++||.+|+++|+++.
T Consensus 319 ~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~ 348 (371)
T COG0484 319 GGRGDLYVRVKVETPKNLSDEQKELLEEFA 348 (371)
T ss_pred CCcCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 767999999999999999999999999985
No 2
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.1e-79 Score=589.53 Aligned_cols=317 Identities=27% Similarity=0.519 Sum_probs=275.5
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC-C
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG-G 102 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~-~ 102 (345)
..|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||++++..+.++ .
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~~~ 81 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCCcc
Confidence 579999999999999999999999999999999998778899999999999999999999999999999876531110 0
Q ss_pred CCCCCcccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC----------c
Q 019162 103 GRGGGMGVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------R 170 (345)
Q Consensus 103 ~~~~~~~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------~ 170 (345)
+++..|+ ++.++|++|||++.. ....+.++++|+.+.|+|||+|+|+|+++++.+++.+.|+ |.|+ +
T Consensus 82 ~~~~~f~-~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~ 160 (369)
T PRK14288 82 DFSDFFE-DLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCK 160 (369)
T ss_pred ccccchh-hHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCC
Confidence 1111111 445688888874321 1122346799999999999999999999999999999998 8774 4
Q ss_pred CCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCCCC
Q 019162 171 RCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGE 238 (345)
Q Consensus 171 ~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~ 238 (345)
.|+|+|.+...+ |++++. ..++|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++.+++.
T Consensus 161 ~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~ 237 (369)
T PRK14288 161 QCNGQGQVFMRQ---GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGK 237 (369)
T ss_pred CCCCCcEEEEEe---ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCC
Confidence 689999865443 444332 27789999999999999999999999999999999999999988889
Q ss_pred CceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCC
Q 019162 239 PGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKG 318 (345)
Q Consensus 239 ~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~G 318 (345)
+|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.+.|++|+++++|++++|+|+|||..+...+|
T Consensus 238 ~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~G 317 (369)
T PRK14288 238 RGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPESSYRG 317 (369)
T ss_pred CCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999977654569
Q ss_pred cEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 319 DLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 319 DL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
||||+|+|.||++|+++|+++|+++|
T Consensus 318 DL~v~~~v~~P~~ls~~q~~~l~~~~ 343 (369)
T PRK14288 318 SLIVELQVIYPKSLNKEQQELLEKLH 343 (369)
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999987
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.2e-78 Score=585.61 Aligned_cols=318 Identities=28% Similarity=0.488 Sum_probs=275.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC-CC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-GG 102 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~~ 102 (345)
.+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+|||||++|+.||+||++++..+.+ ++
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~ 81 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSS 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCc
Confidence 579999999999999999999999999999999998 5779999999999999999999999999999987653111 00
Q ss_pred CCCC-----------CcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-
Q 019162 103 GRGG-----------GMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK- 169 (345)
Q Consensus 103 ~~~~-----------~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~- 169 (345)
++++ ++ .++.|+|++|||++.. ..++.+++.|+++.+.|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 82 ~~~~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~-~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G 159 (372)
T PRK14296 82 NFGDFEDLFSNMGSSGF-SSFTNIFSDFFGSNKS-DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSG 159 (372)
T ss_pred CCCcccccccccccccc-ccchhhhhhhcCCCcc-CCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCc
Confidence 1010 11 1466899999985421 123346799999999999999999999999999999999 8874
Q ss_pred ----------cCCCccceE-EEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEE
Q 019162 170 ----------RRCNCRNEV-YHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVV 226 (345)
Q Consensus 170 ----------~~C~G~G~~-~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~ 226 (345)
+.|+|+|.+ ..++.|+.++++. ..++|++|+|.|++.+.++++|.||+|+++|++|+
T Consensus 160 ~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~ 239 (372)
T PRK14296 160 AESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIK 239 (372)
T ss_pred cCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEE
Confidence 468999985 4445677544432 27789999999999999999999999999999999
Q ss_pred EeecCCCC-CCCCCceEEEEEEEcCCCCcccc-cCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEE
Q 019162 227 FYEDGEPK-IDGEPGDLKFRIRTAPHDRFRRE-GNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKF 304 (345)
Q Consensus 227 ~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~-g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri 304 (345)
|+|+|++. +++.+|||+|+|+++||+.|+|+ |+||+++++|||+|||+|+++.|+||||+ +.|+||+++++|++++|
T Consensus 240 ~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri 318 (372)
T PRK14296 240 LSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIII 318 (372)
T ss_pred EeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEE
Confidence 99999985 57789999999999999999995 89999999999999999999999999997 89999999999999999
Q ss_pred CCCCcCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 305 GGEGMPLHF-SNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 305 ~g~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
+|+|||... ...+|||||+|+|.||+.||++|+++|+++++
T Consensus 319 ~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~ 360 (372)
T PRK14296 319 NNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYE 360 (372)
T ss_pred cCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999653 33469999999999999999999999999874
No 4
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.2e-77 Score=576.10 Aligned_cols=319 Identities=31% Similarity=0.556 Sum_probs=276.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
.+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||++++..+.++.+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 47999999999999999999999999999999999877889999999999999999999999999999987753211101
Q ss_pred CC--CCcc---cChhhhhhhhcCCCC-C----CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---
Q 019162 104 RG--GGMG---VNIQDIFSSFFGGGP-M----EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK--- 169 (345)
Q Consensus 104 ~~--~~~~---~~~~d~F~~~fg~~~-~----~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~--- 169 (345)
.+ ++++ .++.|+|++|||++. . ....+.++++|+++.|+|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~ 162 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGAS 162 (372)
T ss_pred CCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcC
Confidence 00 1111 257799999998532 1 1112346799999999999999999999999999999999 8874
Q ss_pred --------cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEee
Q 019162 170 --------RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYE 229 (345)
Q Consensus 170 --------~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g 229 (345)
+.|+|+|.+...+ |++++. ..++|+.|+|.|++.+.++++|.||||+++|++|+|+|
T Consensus 163 ~~~~~~~C~~C~G~G~v~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g 239 (372)
T PRK14286 163 KGSSPTTCPDCGGSGQIRRTQ---GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSG 239 (372)
T ss_pred CCCCCccCCCCcCeEEEEEEe---ceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECC
Confidence 4688888765443 444322 26789999999999999999999999999999999999
Q ss_pred cCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCC
Q 019162 230 DGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEG 308 (345)
Q Consensus 230 ~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G 308 (345)
+|++.+ +..+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+||||+.+.|+||+++++|++++|+|+|
T Consensus 240 ~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G 319 (372)
T PRK14286 240 EGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHG 319 (372)
T ss_pred ccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCC
Confidence 999965 4567999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred cCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 309 MPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 309 ~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
||..+...+|||||+|+|.||+.||++|+++|+++|+
T Consensus 320 ~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~ 356 (372)
T PRK14286 320 MPYLGAYGKGDQHVIVKIEIPKKITRRQRELIEEFAR 356 (372)
T ss_pred CCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 9987655579999999999999999999999999873
No 5
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=4e-77 Score=583.52 Aligned_cols=311 Identities=37% Similarity=0.663 Sum_probs=274.8
Q ss_pred hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCc
Q 019162 20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA 99 (345)
Q Consensus 20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~ 99 (345)
..+..+|||++|||+++||.+|||+|||+||++||||+|+ + .++|++|++||++||||.+|+.||+||++++..+.
T Consensus 23 ~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~-~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~ 98 (421)
T PTZ00037 23 REVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGG-D---PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE 98 (421)
T ss_pred ccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCc-h---HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC
Confidence 3344689999999999999999999999999999999997 3 37999999999999999999999999988764211
Q ss_pred CCCCCCCCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---------
Q 019162 100 AGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK--------- 169 (345)
Q Consensus 100 ~~~~~~~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~--------- 169 (345)
+ +.++.|+|+.|||++.. ..+.+++.|+.+.|.|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 99 ------~--~~d~~d~f~~~Fggg~~--~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~ 168 (421)
T PTZ00037 99 ------Q--PADASDLFDLIFGGGRK--PGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVD 168 (421)
T ss_pred ------C--CcchhhhHHHhhccccc--cccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCcc
Confidence 1 12678999999986421 12346799999999999999999999999999999999 8875
Q ss_pred -cCCCccce-EEEEEecCceEEEEe---------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCC
Q 019162 170 -RRCNCRNE-VYHKQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGE 232 (345)
Q Consensus 170 -~~C~G~G~-~~~~~~~~g~~~~~~---------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~ 232 (345)
+.|+|+|. +...+.++ ++++++ .++|++|+|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus 169 C~~C~G~G~~~~~~~~g~-~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd 247 (421)
T PTZ00037 169 CKLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEAD 247 (421)
T ss_pred CCCCCCCCeEEEEEeecc-eeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccC
Confidence 47899998 44455666 444332 3789999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc--CCCCcEEEECCCCcC
Q 019162 233 PKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI--TKPKEVRKFGGEGMP 310 (345)
Q Consensus 233 ~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~--~~~g~~~ri~g~G~p 310 (345)
+.+++.||||+|+|+++||+.|+|+|+||+++++|||+|||+|+++.|+||||+.+.|++|++ +++|++++|+|+|||
T Consensus 248 ~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP 327 (421)
T PTZ00037 248 EKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMP 327 (421)
T ss_pred CCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcc
Confidence 988899999999999999999999999999999999999999999999999998899999966 999999999999999
Q ss_pred CCCC-CCCCcEEEEEEEECC--CCCCHHHHHHHHHHhC
Q 019162 311 LHFS-NKKGDLYITFEVLFP--TTLTEDQKTRIKEVLG 345 (345)
Q Consensus 311 ~~~~-~~~GDL~v~~~v~~P--~~l~~~q~~~l~~~l~ 345 (345)
..+. ..+|||||+|+|.|| +.||++|+++|+++|.
T Consensus 328 ~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~ 365 (421)
T PTZ00037 328 TYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFP 365 (421)
T ss_pred cCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhcc
Confidence 7654 357999999999999 9999999999999873
No 6
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.2e-76 Score=572.26 Aligned_cols=319 Identities=36% Similarity=0.580 Sum_probs=276.3
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
.+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+||++....+..+++
T Consensus 2 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g 80 (378)
T PRK14278 2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGG 80 (378)
T ss_pred CCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCC
Confidence 479999999999999999999999999999999998 6789999999999999999999999999999863321111111
Q ss_pred CCCCcccChhhhhhhhcCCCCCC-C-ccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------
Q 019162 104 RGGGMGVNIQDIFSSFFGGGPME-E-DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------- 169 (345)
Q Consensus 104 ~~~~~~~~~~d~F~~~fg~~~~~-~-~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------- 169 (345)
++++|+ ++.|+|++|||++..+ . ....+++.|+++.|+|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 81 ~~~~f~-~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C 159 (378)
T PRK14278 81 FGGGFG-GLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTC 159 (378)
T ss_pred CCcCcC-chhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceec
Confidence 111222 4679999999853211 1 12345799999999999999999999999999999999 8875
Q ss_pred cCCCccceEEE-EEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCC
Q 019162 170 RRCNCRNEVYH-KQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKID 236 (345)
Q Consensus 170 ~~C~G~G~~~~-~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~ 236 (345)
..|+|+|.+.. .+.++|++++.+ .++|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++.++
T Consensus 160 ~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~ 239 (378)
T PRK14278 160 DTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPG 239 (378)
T ss_pred CCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCC
Confidence 46899998544 345677775433 77899999999999999999999999999999999999999764
Q ss_pred -CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC
Q 019162 237 -GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN 315 (345)
Q Consensus 237 -~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~ 315 (345)
+.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+|+..+.|.||+++++|++++|+|+|||..+..
T Consensus 240 ~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~ 319 (378)
T PRK14278 240 GGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRSG 319 (378)
T ss_pred CCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCCCC
Confidence 5679999999999999999999999999999999999999999999977689999999999999999999999976655
Q ss_pred CCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 316 KKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 316 ~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
.+|||||+|+|.||+.||++|+++|++++
T Consensus 320 ~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~ 348 (378)
T PRK14278 320 GRGDLHAHVEVVVPTRLDHEDIELLRELK 348 (378)
T ss_pred CCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 57999999999999999999999999987
No 7
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4e-76 Score=571.85 Aligned_cols=318 Identities=31% Similarity=0.517 Sum_probs=276.5
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC-
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG- 102 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~- 102 (345)
.+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+||+++++.+.+++
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAED 82 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCccc
Confidence 479999999999999999999999999999999998 577889999999999999999999999999988765321110
Q ss_pred CCC-CCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------
Q 019162 103 GRG-GGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------- 169 (345)
Q Consensus 103 ~~~-~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------- 169 (345)
+++ ++++ ++.|+|++|||++......+.+++.|+++.++|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 83 ~~~~~~~~-~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C 161 (377)
T PRK14298 83 IFRGADFG-GFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRC 161 (377)
T ss_pred ccccCCcC-cchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcC
Confidence 111 1222 4679999999863211123356899999999999999999999999999999999 8774
Q ss_pred cCCCccceEEEEEecC-ceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCC-C
Q 019162 170 RRCNCRNEVYHKQIGP-GMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-I 235 (345)
Q Consensus 170 ~~C~G~G~~~~~~~~~-g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~ 235 (345)
+.|+|+|.+...+..+ |++++.+ .++|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++. +
T Consensus 162 ~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~ 241 (377)
T PRK14298 162 PTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSP 241 (377)
T ss_pred CCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCC
Confidence 4689999865544344 4443222 778999999999999999999999999999999999999994 5
Q ss_pred CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC
Q 019162 236 DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN 315 (345)
Q Consensus 236 ~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~ 315 (345)
++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+ +.|+||+++++|++++|+|+|||..++.
T Consensus 242 ~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~~~ 320 (377)
T PRK14298 242 GAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLHGH 320 (377)
T ss_pred CCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCCCC
Confidence 788999999999999999999999999999999999999999999999997 8999999999999999999999986655
Q ss_pred CCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 316 KKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 316 ~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
.+|||||+|+|.||+.|+++|+++|++++
T Consensus 321 ~~GDL~V~~~V~~P~~ls~~~~~ll~~l~ 349 (377)
T PRK14298 321 GKGDQLVKVIVKTPTKLTQEQKELLREFD 349 (377)
T ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 57999999999999999999999999987
No 8
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.3e-76 Score=568.16 Aligned_cols=319 Identities=32% Similarity=0.569 Sum_probs=277.7
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
.+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.+.+.++
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~ 81 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG 81 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCccc
Confidence 47999999999999999999999999999999999877889999999999999999999999999999987653211101
Q ss_pred CCCC---cc---cChhhhhhhhcCCCCCC-CccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162 104 RGGG---MG---VNIQDIFSSFFGGGPME-EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------ 169 (345)
Q Consensus 104 ~~~~---~~---~~~~d~F~~~fg~~~~~-~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------ 169 (345)
+.++ ++ .++.|+|++|||++... +....+++.|+++++.|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 82 ~~~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 161 (365)
T PRK14285 82 FSGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGT 161 (365)
T ss_pred cCCCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCC
Confidence 1111 11 25779999999853211 112346799999999999999999999999999999999 8775
Q ss_pred -----cCCCccceEEEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCC
Q 019162 170 -----RRCNCRNEVYHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGE 232 (345)
Q Consensus 170 -----~~C~G~G~~~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~ 232 (345)
..|+|+|.+.. ++|++++.+ .++|++|+|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus 162 ~~~~C~~C~G~G~~~~---~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~ 238 (365)
T PRK14285 162 SPSICNMCNGSGRVMQ---GGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGS 238 (365)
T ss_pred CCccCCCccCceeEEe---cCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccc
Confidence 46888887543 456664322 7889999999999999999999999999999999999999
Q ss_pred CCCC-CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCC
Q 019162 233 PKID-GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL 311 (345)
Q Consensus 233 ~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~ 311 (345)
+.++ +.+|||+|+|++++|+.|+|+|+||+++++|||.||++|++++|+||||+.+.|.||+++++|++++|+|+|||.
T Consensus 239 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~ 318 (365)
T PRK14285 239 VNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPI 318 (365)
T ss_pred cCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccC
Confidence 9764 568999999999999999999999999999999999999999999999988999999999999999999999998
Q ss_pred CCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 312 HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 312 ~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
.+...+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus 319 ~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~ 352 (365)
T PRK14285 319 LHTEKFGNLILIIKIKTPKNLNSNAIKLLENLSK 352 (365)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 7655569999999999999999999999999873
No 9
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-75 Score=568.03 Aligned_cols=317 Identities=29% Similarity=0.521 Sum_probs=278.1
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
..|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+||++++..+.++++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGG 81 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCC
Confidence 479999999999999999999999999999999998 5778999999999999999999999999999987653211111
Q ss_pred CCCCcccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------c
Q 019162 104 RGGGMGVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------R 170 (345)
Q Consensus 104 ~~~~~~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----------~ 170 (345)
.++|+ ++.|+|++|||++.. +.....+++.|+++.++|||+|+|+|+++++.+++.+.|+ |.|+ +
T Consensus 82 -~~~f~-~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~ 159 (371)
T PRK14287 82 -AGDFG-GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCS 159 (371)
T ss_pred -Ccccc-chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccC
Confidence 11222 467999999985321 1112345799999999999999999999999999999999 8764 4
Q ss_pred CCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCC-CC
Q 019162 171 RCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-ID 236 (345)
Q Consensus 171 ~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~ 236 (345)
.|+|+|.+ ..+++++|++++.+ .++|..|+|.+++.+.++++|.||+|+++|++|+|+|+|++. .+
T Consensus 160 ~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~ 239 (371)
T PRK14287 160 HCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNG 239 (371)
T ss_pred CCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCC
Confidence 68999985 44567888887533 667899999999999999999999999999999999999996 45
Q ss_pred CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCC
Q 019162 237 GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK 316 (345)
Q Consensus 237 ~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~ 316 (345)
+.+|||+|+|+++||+.|+|+|+||++++.|||.||++|++++|+|+||+ +.|+||+++++|++++|+|+|||..+++.
T Consensus 240 ~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~~~~ 318 (371)
T PRK14287 240 GPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVHGRG 318 (371)
T ss_pred CCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCCCCC
Confidence 67899999999999999999999999999999999999999999999997 89999999999999999999999766555
Q ss_pred CCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 317 KGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 317 ~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
+|||||+|+|.+|+.|+.+|+++|++++
T Consensus 319 ~GDL~V~~~v~~P~~l~~~q~~ll~~l~ 346 (371)
T PRK14287 319 QGDQHVQVRVVTPKNLTEKEKELMREFA 346 (371)
T ss_pred CCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 7999999999999999999999999987
No 10
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.3e-76 Score=571.99 Aligned_cols=321 Identities=33% Similarity=0.549 Sum_probs=278.1
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC-C
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-G 101 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~ 101 (345)
+.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++..+.. +
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~ 82 (386)
T PRK14277 3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ 82 (386)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence 457999999999999999999999999999999999877889999999999999999999999999999987753211 1
Q ss_pred C-----CCC-CCcc---cChhhhhhhhcCCC----CCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CC
Q 019162 102 G-----GRG-GGMG---VNIQDIFSSFFGGG----PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-AP 167 (345)
Q Consensus 102 ~-----~~~-~~~~---~~~~d~F~~~fg~~----~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~ 167 (345)
+ +++ ++++ .++.|+|++||++. ........+++.|+++.|+|||+|+|+|+++++.+++.+.|+ |.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~ 162 (386)
T PRK14277 83 GGFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCK 162 (386)
T ss_pred CCcCCCCccccCccccccchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCC
Confidence 0 100 1111 13557788887631 111112345799999999999999999999999999999999 87
Q ss_pred CC-----------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCc
Q 019162 168 GK-----------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQ 223 (345)
Q Consensus 168 g~-----------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~ 223 (345)
|+ ..|+|+|.+ ...++++|++++.+ .++|++|+|.+++.+.++++|.||+|+++|+
T Consensus 163 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~ 242 (386)
T PRK14277 163 GSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQ 242 (386)
T ss_pred CCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCc
Confidence 74 468999984 45567889887644 7789999999999999999999999999999
Q ss_pred EEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEE
Q 019162 224 EVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVR 302 (345)
Q Consensus 224 ~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ 302 (345)
+|+|+|+|++. .++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|+++.|+||||+ +.|.||+++++|+++
T Consensus 243 ~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~ 321 (386)
T PRK14277 243 MITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKF 321 (386)
T ss_pred EEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCCEE
Confidence 99999999984 4567899999999999999999999999999999999999999999999997 899999999999999
Q ss_pred EECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 303 KFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 303 ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
+|+|+|||..+.+.+|||||+|+|.||+.||++|+++|++++
T Consensus 322 ri~g~G~p~~~~~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~ 363 (386)
T PRK14277 322 RLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQKELLREFE 363 (386)
T ss_pred EECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 999999998765557999999999999999999999999987
No 11
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.3e-76 Score=570.19 Aligned_cols=319 Identities=34% Similarity=0.585 Sum_probs=278.0
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
.+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||.+|+.||+||++++..+.++++
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 81 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG 81 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCC
Confidence 479999999999999999999999999999999998 5678999999999999999999999999999987753211111
Q ss_pred CC-CCc--ccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---------
Q 019162 104 RG-GGM--GVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK--------- 169 (345)
Q Consensus 104 ~~-~~~--~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~--------- 169 (345)
++ ++| ++++.|+|++|||++.. +.....+++.|+.+.|.|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 82 ~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~ 161 (376)
T PRK14280 82 FGGGDFGGGFGFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKE 161 (376)
T ss_pred CCCCCccccccchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCc
Confidence 11 111 12577999999985321 1122345799999999999999999999999999999999 8774
Q ss_pred --cCCCccceEE-EEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCC
Q 019162 170 --RRCNCRNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK 234 (345)
Q Consensus 170 --~~C~G~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~ 234 (345)
..|+|+|.+. ..++++|++++.+ .++|+.|+|.|++.+.++++|.||+|+++|++|+|+|+|++.
T Consensus 162 ~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~ 241 (376)
T PRK14280 162 TCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPG 241 (376)
T ss_pred cCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCC
Confidence 4689999854 4456778876432 678999999999999999999999999999999999999995
Q ss_pred C-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCC
Q 019162 235 I-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHF 313 (345)
Q Consensus 235 ~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~ 313 (345)
+ ++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+ +.|+||+++++|++++|+|+|||..+
T Consensus 242 ~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~ 320 (376)
T PRK14280 242 VNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVPNVR 320 (376)
T ss_pred CCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCCCCC
Confidence 4 567899999999999999999999999999999999999999999999996 89999999999999999999999865
Q ss_pred CCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 314 SNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 314 ~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
+..+|||||+|+|.||+.||++|+++|++++
T Consensus 321 ~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~ 351 (376)
T PRK14280 321 GYGQGDQYVVVRVVTPTKLTDRQKELLREFA 351 (376)
T ss_pred CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 5557999999999999999999999999987
No 12
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.7e-75 Score=568.81 Aligned_cols=318 Identities=31% Similarity=0.562 Sum_probs=278.9
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC--
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG-- 101 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~-- 101 (345)
.+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+||++++..+.++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence 479999999999999999999999999999999998 57789999999999999999999999999999877532111
Q ss_pred CC---CC--CCcccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----
Q 019162 102 GG---RG--GGMGVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----- 169 (345)
Q Consensus 102 ~~---~~--~~~~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----- 169 (345)
++ ++ .++ .++.|+|++|||++.. +.....+++.|+.+.|.|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 82 ~~~~~~~~~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~ 160 (380)
T PRK14276 82 GGFGGFDGSGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPG 160 (380)
T ss_pred CCCCCccccccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCC
Confidence 01 11 112 2577999999985321 1123346799999999999999999999999999999999 8774
Q ss_pred ------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeec
Q 019162 170 ------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYED 230 (345)
Q Consensus 170 ------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~ 230 (345)
+.|+|+|.+ ...++++|++++.+ .++|+.|+|.|++.+.++++|.||+|+++|++|+|+|+
T Consensus 161 ~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~ 240 (380)
T PRK14276 161 TSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQ 240 (380)
T ss_pred CCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEecc
Confidence 468999985 44567788887643 67899999999999999999999999999999999999
Q ss_pred CCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCc
Q 019162 231 GEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGM 309 (345)
Q Consensus 231 G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~ 309 (345)
|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|++++|+|+||+ +.|+||+++++|++++|+|+||
T Consensus 241 G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~G~ 319 (380)
T PRK14276 241 GEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGKGA 319 (380)
T ss_pred ccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCCCc
Confidence 99964 466799999999999999999999999999999999999999999999997 8999999999999999999999
Q ss_pred CCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 310 PLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 310 p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
|..+.+.+|||||+|+|.||+.||++|+++|++++
T Consensus 320 p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~ 354 (380)
T PRK14276 320 PKLRGGGNGDQHVTVNIVTPTKLNDAQKEALKAFA 354 (380)
T ss_pred CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 98765557999999999999999999999999987
No 13
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.7e-75 Score=565.93 Aligned_cols=320 Identities=33% Similarity=0.602 Sum_probs=278.4
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC-C-
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-G- 101 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~- 101 (345)
.+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.+.+ +
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS 82 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence 47999999999999999999999999999999999877889999999999999999999999999999987753211 0
Q ss_pred CCCCCCcc----cChhhhhhhhcCCCC--C-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC----
Q 019162 102 GGRGGGMG----VNIQDIFSSFFGGGP--M-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK---- 169 (345)
Q Consensus 102 ~~~~~~~~----~~~~d~F~~~fg~~~--~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~---- 169 (345)
++++ ++. .++.|+|++|||++. . +.....+++.|+++.|+|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 83 ~~~~-~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 161 (380)
T PRK14297 83 GGFG-GFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKP 161 (380)
T ss_pred CCCC-CcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccC
Confidence 1111 111 146799999998531 1 1122345799999999999999999999999999999999 8774
Q ss_pred -------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEee
Q 019162 170 -------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYE 229 (345)
Q Consensus 170 -------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g 229 (345)
+.|+|+|.+ ..++.++|++++.. .++|..|+|.|++.+.++++|.||||+++|++|+|+|
T Consensus 162 ~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g 241 (380)
T PRK14297 162 GTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRG 241 (380)
T ss_pred CCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEec
Confidence 468999985 44566778776432 6789999999999999999999999999999999999
Q ss_pred cCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCC
Q 019162 230 DGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEG 308 (345)
Q Consensus 230 ~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G 308 (345)
+|++.+ ++.+|||+|+|++++|+.|+|+|+||++++.|||+||++|+++.|+|+||+ +.|.||+++++|++++|+|+|
T Consensus 242 ~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G 320 (380)
T PRK14297 242 QGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKG 320 (380)
T ss_pred CccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCC
Confidence 999854 567899999999999999999999999999999999999999999999996 899999999999999999999
Q ss_pred cCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 309 MPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 309 ~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
||..+...+|||||+|+|.||+.||++|+++|+++|.
T Consensus 321 ~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~ 357 (380)
T PRK14297 321 VPRVNSTGRGNQYVTVIVDIPKKLNSKQKEALTMFME 357 (380)
T ss_pred cCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 9976655579999999999999999999999999873
No 14
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-74 Score=561.35 Aligned_cols=322 Identities=31% Similarity=0.551 Sum_probs=277.7
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG 102 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 102 (345)
.+|||+||||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||++|+||.+|+.||+||++++.....+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 57999999999999999999999999999999999854 67899999999999999999999999999987764211110
Q ss_pred CCCCC-cc---cCh-----hhhhhhhcCCCCC--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-
Q 019162 103 GRGGG-MG---VNI-----QDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK- 169 (345)
Q Consensus 103 ~~~~~-~~---~~~-----~d~F~~~fg~~~~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~- 169 (345)
+.+++ ++ .++ .|+|++|||++.. +.....++++|+++.++|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G 162 (369)
T PRK14282 83 ESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTG 162 (369)
T ss_pred CCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccC
Confidence 00111 11 011 3789999985211 1122346799999999999999999999999999999999 8774
Q ss_pred ----------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEE
Q 019162 170 ----------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVV 226 (345)
Q Consensus 170 ----------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~ 226 (345)
+.|+|+|.+ ..+++++|++++.+ .++|++|+|.+++.+.++++|.||||+++|++|+
T Consensus 163 ~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~ 242 (369)
T PRK14282 163 VEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLR 242 (369)
T ss_pred CCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEE
Confidence 468999985 45567888887643 6779999999999999999999999999999999
Q ss_pred EeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEEC
Q 019162 227 FYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFG 305 (345)
Q Consensus 227 ~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~ 305 (345)
|+|+|++. .++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+.+.|+||+++++|++++|+
T Consensus 243 ~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~ 322 (369)
T PRK14282 243 ITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLK 322 (369)
T ss_pred EecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEEC
Confidence 99999985 46778999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 306 GEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 306 g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
|+|||..+...+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus 323 GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~ 362 (369)
T PRK14282 323 GKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKELAK 362 (369)
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 9999975444579999999999999999999999999873
No 15
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-74 Score=563.35 Aligned_cols=319 Identities=34% Similarity=0.597 Sum_probs=275.0
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC-C
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG-G 102 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~-~ 102 (345)
.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++...... +
T Consensus 2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~ 81 (397)
T PRK14281 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG 81 (397)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCC
Confidence 479999999999999999999999999999999998778899999999999999999999999999999877532111 1
Q ss_pred --CCCCCcccChhhhh---hhhcCCCC--------------CCC-c----cccccCCceeeeeehhheeeeccceEEEEE
Q 019162 103 --GRGGGMGVNIQDIF---SSFFGGGP--------------MEE-D----EKIVKGDDVIVELDATLEDLYMGGSLKVWR 158 (345)
Q Consensus 103 --~~~~~~~~~~~d~F---~~~fg~~~--------------~~~-~----~~~~kg~di~~~l~itlee~~~G~~~~v~~ 158 (345)
+++++ +.++.|+| ++|||++. ... . ....++.|+++.|+|||||+|+|+++++.+
T Consensus 82 ~~~~~~~-~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~ 160 (397)
T PRK14281 82 GPGYGGG-GGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKI 160 (397)
T ss_pred CCCCCcC-CCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEE
Confidence 11111 12455665 47887421 000 0 112468999999999999999999999999
Q ss_pred EeeeeeC-CCCC----------cCCCccceEE-EEEecCceEEEEe------------ecccccccCceEEEecEEEEEE
Q 019162 159 EKNVIKP-APGK----------RRCNCRNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVD 214 (345)
Q Consensus 159 ~r~~~c~-c~g~----------~~C~G~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~ 214 (345)
++.+.|+ |.|+ +.|+|+|.+. ..++++|++++.+ .++|+.|+|.+++.+.++++|.
T Consensus 161 ~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~ 240 (397)
T PRK14281 161 KKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVT 240 (397)
T ss_pred EeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEEe
Confidence 9999999 8774 4689999854 4456677776532 7789999999999999999999
Q ss_pred ecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeC
Q 019162 215 IEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK 293 (345)
Q Consensus 215 Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~ 293 (345)
||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||+ +.|+||
T Consensus 241 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip 319 (397)
T PRK14281 241 VPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGA-VKLTIP 319 (397)
T ss_pred cCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCcc-EEEEeC
Confidence 999999999999999999965 568999999999999999999999999999999999999999999999996 899999
Q ss_pred CcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 294 GITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 294 ~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
+++++|++++|+|+|||..+...+|||||+|+|.||+.||++|+++|++++
T Consensus 320 ~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~ 370 (397)
T PRK14281 320 AGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQDKELLKELK 370 (397)
T ss_pred CccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 999999999999999997665557999999999999999999999999987
No 16
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-74 Score=562.58 Aligned_cols=320 Identities=28% Similarity=0.466 Sum_probs=269.3
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC--
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-- 100 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-- 100 (345)
+.+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+|||||++|+.||+||+.+...+..
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~ 86 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR 86 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence 358999999999999999999999999999999999878889999999999999999999999999999743211100
Q ss_pred ----CCCCCC---C---ccc---------------ChhhhhhhhcCCCC-CCCccccccCCceeeeeehhheeeeccceE
Q 019162 101 ----GGGRGG---G---MGV---------------NIQDIFSSFFGGGP-MEEDEKIVKGDDVIVELDATLEDLYMGGSL 154 (345)
Q Consensus 101 ----~~~~~~---~---~~~---------------~~~d~F~~~fg~~~-~~~~~~~~kg~di~~~l~itlee~~~G~~~ 154 (345)
++++++ + .+. ++.|+|++||+++. .....+.++++|+++.|+|||+|+|+|+++
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~ 166 (392)
T PRK14279 87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM 166 (392)
T ss_pred cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence 000000 0 001 23467777786432 111233467999999999999999999999
Q ss_pred EEEEEeeeeeC-CCCC-----------cCCCccceEEEEEecCceEEE----------EeecccccccCceEEEecEEEE
Q 019162 155 KVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQ----------MTEQVCDQCQNVKYEREGYFVT 212 (345)
Q Consensus 155 ~v~~~r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~----------~~~~~C~~C~G~g~~~~~~~~~ 212 (345)
++.+++.+.|+ |.|+ +.|+|+|.+...+ ++..+++ ...++|+.|+|.+++.+.++++
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~ 245 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ-GAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTIN 245 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe-cceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeE
Confidence 99999999999 8775 4688999865544 2211111 2378899999999999999999
Q ss_pred EEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEE
Q 019162 213 VDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDIS 291 (345)
Q Consensus 213 V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~ 291 (345)
|.||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||+ +.|+
T Consensus 246 V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~-i~v~ 324 (392)
T PRK14279 246 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGP-VGVK 324 (392)
T ss_pred EEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCce-EEEE
Confidence 99999999999999999999965 466799999999999999999999999999999999999999999999996 8999
Q ss_pred eCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 292 TKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 292 i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
||+++++|++++|+|+|||... ..+|||||+|+|.||++|+++|+++|++++.
T Consensus 325 Ip~g~~~g~~iri~g~G~p~~~-~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~ 377 (392)
T PRK14279 325 VPAGTADGRILRVRGRGVPKRS-GGAGDLLVTVKVAVPPNLDGAAAEALEAYAE 377 (392)
T ss_pred ECCCCCCCCEEEECCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999999999999643 3479999999999999999999999999873
No 17
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-74 Score=558.03 Aligned_cols=317 Identities=34% Similarity=0.565 Sum_probs=274.4
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
.+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||+++++.+.++++
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g 82 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG 82 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence 57999999999999999999999999999999999877889999999999999999999999999999987753211111
Q ss_pred CCC--CcccChhhhhhhhcCCCCC--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---------
Q 019162 104 RGG--GMGVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK--------- 169 (345)
Q Consensus 104 ~~~--~~~~~~~d~F~~~fg~~~~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~--------- 169 (345)
+.+ .+..++.|+|++|||.+.. ....+..++.|+.+.|.|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 83 ~~~~~~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~ 162 (373)
T PRK14301 83 FSSAEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPE 162 (373)
T ss_pred cccccccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCc
Confidence 111 0011456889999873211 1123346799999999999999999999999999999999 8774
Q ss_pred --cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC
Q 019162 170 --RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI 235 (345)
Q Consensus 170 --~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~ 235 (345)
+.|+|+|.+...+ |++++. ..++|+.|+|.|++.+.++++|.||+|+++|++|+|+|+|++.+
T Consensus 163 ~C~~C~G~G~v~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~ 239 (373)
T PRK14301 163 TCRHCGGSGQVRQSQ---GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGV 239 (373)
T ss_pred ccCCccCeeEEEEEe---eeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCC
Confidence 4688988865433 444432 27789999999999999999999999999999999999999854
Q ss_pred -CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCC
Q 019162 236 -DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS 314 (345)
Q Consensus 236 -~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~ 314 (345)
++.+|||+|+|++++|+.|+|+|+||+++++|||.+|++|++++|+|+||+ +.|.||+++++|++++|+|+|||..+.
T Consensus 240 ~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~~ 318 (373)
T PRK14301 240 HGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLGS 318 (373)
T ss_pred CCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCCC
Confidence 677899999999999999999999999999999999999999999999997 999999999999999999999998765
Q ss_pred CCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 315 NKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 315 ~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
..+|||||+|+|.||+.|+++|+++|++++
T Consensus 319 ~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~ 348 (373)
T PRK14301 319 SQKGDLLVEVSVVTPTKLTKRQEELLREFE 348 (373)
T ss_pred CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 557999999999999999999999999986
No 18
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.6e-74 Score=560.58 Aligned_cols=317 Identities=31% Similarity=0.517 Sum_probs=271.9
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC---C
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA---G 101 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~---~ 101 (345)
.|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||++|+|+.+|+.||+||++++..+.+ +
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~ 80 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence 4899999999999999999999999999999999977889999999999999999999999999999876532211 1
Q ss_pred CCCCC----------Ccc---cChhhhhhhhcCCCC---C--CCccccccCCceeeeeehhheeeeccceEEEEEEeeee
Q 019162 102 GGRGG----------GMG---VNIQDIFSSFFGGGP---M--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVI 163 (345)
Q Consensus 102 ~~~~~----------~~~---~~~~d~F~~~fg~~~---~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~ 163 (345)
+++++ .|+ ..+.|+|++||++.. . .......++.|+.+.|.|||||+|+|+++++.+++.+.
T Consensus 81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~ 160 (391)
T PRK14284 81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKS 160 (391)
T ss_pred CCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeecc
Confidence 11100 011 012588999997521 1 11123457899999999999999999999999999999
Q ss_pred eC-CCCC-----------cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCC
Q 019162 164 KP-APGK-----------RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGM 219 (345)
Q Consensus 164 c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~ 219 (345)
|+ |.|+ +.|+|+|.+...+ |++++. ..++|+.|+|.+++.+.++++|.||||+
T Consensus 161 C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~ 237 (391)
T PRK14284 161 CDACSGSGANSSQGIKVCDRCKGSGQVVQSR---GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGV 237 (391)
T ss_pred CCCCcccccCCCCCCeecCccCCeeEEEEEe---ceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCC
Confidence 99 8765 4688888865444 444322 2778999999999999999999999999
Q ss_pred CCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCC-CcEEEEEeCCcCC
Q 019162 220 QDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLD-EHLVDISTKGITK 297 (345)
Q Consensus 220 ~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ld-g~~i~v~i~~~~~ 297 (345)
++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|++++|+|+| |..+.|+||++++
T Consensus 238 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~ 317 (391)
T PRK14284 238 DSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQ 317 (391)
T ss_pred CCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccC
Confidence 9999999999999965 5778999999999999999999999999999999999999999999999 5679999999999
Q ss_pred CCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 298 PKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 298 ~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
+|++++|+|+|||..++..+|||||+|+|.+|+.|+++|+++|++++
T Consensus 318 ~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~ 364 (391)
T PRK14284 318 SGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLRQFA 364 (391)
T ss_pred CCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 99999999999998765557999999999999999999999999987
No 19
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.8e-74 Score=558.31 Aligned_cols=318 Identities=32% Similarity=0.560 Sum_probs=272.1
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccc----cCccccccC
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDT----YGEEGLKQH 98 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~----~g~~~~~~~ 98 (345)
+.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+ ||++++..+
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~ 86 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG 86 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence 4689999999999999999999999999999999998777899999999999999999999999999 998876521
Q ss_pred cC-C--CCC--------C--------CCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEE
Q 019162 99 AA-G--GGR--------G--------GGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWRE 159 (345)
Q Consensus 99 ~~-~--~~~--------~--------~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~ 159 (345)
.+ + +++ + ++++..+.|+|++||+++. ...+.+++.|+++.|.|||||+|+|++++|.++
T Consensus 87 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~--~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~ 164 (389)
T PRK14295 87 PGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGG--RRTQPRRGADVESEVTLSFTEAIDGATVPLRLT 164 (389)
T ss_pred CCCCCCCCCCcccccccccccccccccccccchhhhhcccccCCC--CCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence 11 0 000 0 0011124577777776431 122346799999999999999999999999999
Q ss_pred eeeeeC-CCCC-----------cCCCccceEEEEEecCceEEE-----------EeecccccccCceEEEecEEEEEEec
Q 019162 160 KNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQ-----------MTEQVCDQCQNVKYEREGYFVTVDIE 216 (345)
Q Consensus 160 r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~-----------~~~~~C~~C~G~g~~~~~~~~~V~Ip 216 (345)
+.+.|+ |.|+ +.|+|+|.+...+ | +|.++ ...++|+.|+|.+++.+.++++|.||
T Consensus 165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g-~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip 242 (389)
T PRK14295 165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS-G-GFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIP 242 (389)
T ss_pred ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe-c-ceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeC
Confidence 999999 8774 4688998865554 2 22222 12788999999999999999999999
Q ss_pred CCCCCCcEEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc
Q 019162 217 KGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI 295 (345)
Q Consensus 217 ~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~ 295 (345)
+|+++|++|+|+|+|++. .++.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|++++|+|+||+.+.|.||++
T Consensus 243 ~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g 322 (389)
T PRK14295 243 AGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPG 322 (389)
T ss_pred CCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCc
Confidence 999999999999999985 4677899999999999999999999999999999999999999999999998899999999
Q ss_pred CCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 296 TKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 296 ~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
+++|++++|+|+|||..+ ..+|||||+|+|.||+.||++|+++|+++++
T Consensus 323 ~~~g~~iri~G~G~p~~~-~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~ 371 (389)
T PRK14295 323 TPNGRVLRVRGKGAVRKD-GTRGDLLVTVEVAVPKDLSGKAREALEAFRE 371 (389)
T ss_pred cCCCcEEEECCCCcCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999999743 3479999999999999999999999999863
No 20
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.2e-74 Score=555.83 Aligned_cols=318 Identities=35% Similarity=0.589 Sum_probs=274.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++..+.++++
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 82 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG 82 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence 57999999999999999999999999999999999877889999999999999999999999999999887653221111
Q ss_pred CCC--CcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------
Q 019162 104 RGG--GMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------- 169 (345)
Q Consensus 104 ~~~--~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------- 169 (345)
+++ +++..+.++|++|||++......+.+++.|+++.|+|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 83 ~~~~~~~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C 162 (371)
T PRK10767 83 FGGGGGFGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTC 162 (371)
T ss_pred CCCccccccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccC
Confidence 111 22212568888888753211123356899999999999999999999999999999999 8774
Q ss_pred cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCC-CCC
Q 019162 170 RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KID 236 (345)
Q Consensus 170 ~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~ 236 (345)
+.|+|+|.+...+ |++++. ..++|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++ .++
T Consensus 163 ~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~ 239 (371)
T PRK10767 163 PTCHGAGQVRMQQ---GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERG 239 (371)
T ss_pred CCCCCeeEEEEee---ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCC
Confidence 4688888765444 444322 267899999999999999999999999999999999999998 456
Q ss_pred CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCC
Q 019162 237 GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK 316 (345)
Q Consensus 237 ~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~ 316 (345)
+.+|||+|+|+++||+.|+|+|+||++++.|||++|++|+++.|+|+|| .+.|.||+++++|++++|+|+|||..++..
T Consensus 240 ~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~ 318 (371)
T PRK10767 240 GPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSVRSGA 318 (371)
T ss_pred CCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999 589999999999999999999999866555
Q ss_pred CCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 317 KGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 317 ~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
+|||||+|+|.||+.|+.+|+++|+++++
T Consensus 319 ~GDL~v~~~v~~P~~l~~~~~~ll~~l~~ 347 (371)
T PRK10767 319 RGDLYCQVVVETPVNLTKRQKELLEEFEE 347 (371)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 79999999999999999999999999873
No 21
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.2e-73 Score=551.71 Aligned_cols=317 Identities=34% Similarity=0.599 Sum_probs=274.5
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG 102 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 102 (345)
..+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++..+..+
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~- 80 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFS- 80 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCC-
Confidence 3579999999999999999999999999999999998778899999999999999999999999999999877532111
Q ss_pred CCCCCcc---cChhhhhhhhcC-CCCC--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162 103 GRGGGMG---VNIQDIFSSFFG-GGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------ 169 (345)
Q Consensus 103 ~~~~~~~---~~~~d~F~~~fg-~~~~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------ 169 (345)
++ +++. .++.|+|++||| ++.. +......+++|+++.|.|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 81 ~~-~~~~~~~~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 159 (366)
T PRK14294 81 GF-SGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGT 159 (366)
T ss_pred Cc-CccccchhhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCC
Confidence 11 1111 246789999998 3211 1112346799999999999999999999999999999999 8774
Q ss_pred -----cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCC
Q 019162 170 -----RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGE 232 (345)
Q Consensus 170 -----~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~ 232 (345)
+.|+|+|.+.... |++++. ..++|+.|+|.+++.+.++++|.||||+++|++|+|+|+|+
T Consensus 160 ~~~~C~~C~G~G~~~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 236 (366)
T PRK14294 160 SPTTCPQCGGSGQVTQSQ---GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGE 236 (366)
T ss_pred CcccCCCcCCeEEEEEEe---eeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCcc
Confidence 4688888765432 444322 27789999999999999999999999999999999999999
Q ss_pred CC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCC
Q 019162 233 PK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL 311 (345)
Q Consensus 233 ~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~ 311 (345)
+. .++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|++++|+|+||+ +.|.||+++++|++++|+|+|||.
T Consensus 237 ~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~ 315 (366)
T PRK14294 237 AGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPS 315 (366)
T ss_pred CCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCC
Confidence 85 5678999999999999999999999999999999999999999999999996 699999999999999999999997
Q ss_pred CCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 312 HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 312 ~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
.+...+|||||+|+|.+|+.|+.+|+++|+++++
T Consensus 316 ~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~ 349 (366)
T PRK14294 316 LRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFAR 349 (366)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 7655579999999999999999999999999873
No 22
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.6e-72 Score=542.29 Aligned_cols=318 Identities=32% Similarity=0.512 Sum_probs=273.8
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH-HHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE-EANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG 102 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 102 (345)
.+|||++|||+++||.+|||+|||+||++||||+|++++ +|+++|++|++||++|+|+.+|+.||+||+.++..+.++.
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~ 81 (365)
T PRK14290 2 AKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNF 81 (365)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCc
Confidence 379999999999999999999999999999999998664 7899999999999999999999999999998764211100
Q ss_pred CCCC--CcccChhhhhhhhcCCCC------C--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC--
Q 019162 103 GRGG--GMGVNIQDIFSSFFGGGP------M--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-- 169 (345)
Q Consensus 103 ~~~~--~~~~~~~d~F~~~fg~~~------~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-- 169 (345)
++++ ++ .++.|+|++|||++. . ...+..+++.|+++.|.|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 82 ~~~~~~~~-~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~ 160 (365)
T PRK14290 82 NWDNFTHF-SDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGA 160 (365)
T ss_pred cccccccc-cchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccC
Confidence 0000 12 267899999998521 0 0111123488999999999999999999999999999998 8774
Q ss_pred --------cCCCccceEEEEEecCceEEEE--------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEE
Q 019162 170 --------RRCNCRNEVYHKQIGPGMFQQM--------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF 227 (345)
Q Consensus 170 --------~~C~G~G~~~~~~~~~g~~~~~--------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~ 227 (345)
+.|+|+|.+...+ ++|++.+. ..++|++|+|.+++.+.++++|.||||+.+|++|+|
T Consensus 161 ~~~~~~~C~~C~G~G~~~~~~-~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 239 (365)
T PRK14290 161 KNGKLITCPTCHGTGQQRIVR-GQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV 239 (365)
T ss_pred CCCCCccCCCCCCcCEEEEEe-ccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence 4689999854444 46665331 278899999999999999999999999999999999
Q ss_pred eecCCCCCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCC
Q 019162 228 YEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGE 307 (345)
Q Consensus 228 ~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~ 307 (345)
+|+|++ +++.+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|++|+ ++|.||+++++|++++|+|+
T Consensus 240 ~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~ 317 (365)
T PRK14290 240 KGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGA 317 (365)
T ss_pred ccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCC
Confidence 999996 6888999999999999999999999999999999999999999999999995 99999999999999999999
Q ss_pred CcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 308 GMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 308 G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
|||..+...+|||||+|+|.+|+.|+++|+++|+++|.
T Consensus 318 G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~ 355 (365)
T PRK14290 318 GMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREFFD 355 (365)
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 99976655579999999999999999999999999873
No 23
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-72 Score=544.74 Aligned_cols=317 Identities=29% Similarity=0.539 Sum_probs=269.1
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCc--CC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA--AG 101 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--~~ 101 (345)
.+|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+|+.+|+.||+||++++.... ++
T Consensus 2 ~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~ 80 (372)
T PRK14300 2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGG 80 (372)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCC
Confidence 379999999999999999999999999999999997 566889999999999999999999999999998765321 11
Q ss_pred CCCCCCcccChh----hhhhhhcCCCCCCCc-cccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162 102 GGRGGGMGVNIQ----DIFSSFFGGGPMEED-EKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------ 169 (345)
Q Consensus 102 ~~~~~~~~~~~~----d~F~~~fg~~~~~~~-~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------ 169 (345)
++..++++.++. ++|+.|||++..... ..+.++.|+++.+.|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 81 ~g~~~~~~~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~ 160 (372)
T PRK14300 81 GGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGE 160 (372)
T ss_pred CCCCCccccchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCC
Confidence 110012211233 445544443211111 1235789999999999999999999999999999999 8774
Q ss_pred -----cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCC
Q 019162 170 -----RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGE 232 (345)
Q Consensus 170 -----~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~ 232 (345)
+.|+|+|.+... .|++++. ..++|++|+|.|++.+.++++|.||+|+++|++|+|+|+|+
T Consensus 161 ~~~~C~~C~G~G~~~~~---~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~ 237 (372)
T PRK14300 161 TVTTCDACSGVGATRMQ---QGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGE 237 (372)
T ss_pred CCccCCCccCeEEEEEe---eceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEecccc
Confidence 468899986543 2455422 27889999999999999999999999999999999999999
Q ss_pred CC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCC
Q 019162 233 PK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL 311 (345)
Q Consensus 233 ~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~ 311 (345)
+. +++.+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||+.++|.||+++++|++++|+|+|||.
T Consensus 238 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~ 317 (372)
T PRK14300 238 AGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSK 317 (372)
T ss_pred CCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCC
Confidence 85 56789999999999999999999999999999999999999999999999988999999999999999999999997
Q ss_pred CCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 312 HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 312 ~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
.+...+|||||+|+|.||++||++|+++|++++
T Consensus 318 ~~~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~ 350 (372)
T PRK14300 318 MRSTIRGDMLTHIHVEVPKNLSKRQRELLEEFK 350 (372)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 655557999999999999999999999999987
No 24
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.7e-72 Score=544.35 Aligned_cols=317 Identities=33% Similarity=0.572 Sum_probs=269.7
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC-
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG- 102 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~- 102 (345)
.+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++||||.+|+.||+||+.++.......
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 479999999999999999999999999999999998 477889999999999999999999999999988764321110
Q ss_pred ---CCCCCcccChhhhhhhhc---C-C---CC--C--CC---ccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC
Q 019162 103 ---GRGGGMGVNIQDIFSSFF---G-G---GP--M--EE---DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP 165 (345)
Q Consensus 103 ---~~~~~~~~~~~d~F~~~f---g-~---~~--~--~~---~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~ 165 (345)
++++..+.++.|+|++|| + + +. . .. ..+..+++|+.+.|.|||+|+|+|+++++.+++.+.|+
T Consensus 81 ~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~ 160 (382)
T PRK14291 81 GQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCE 160 (382)
T ss_pred cccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCC
Confidence 111101125678887773 2 1 00 0 00 12234789999999999999999999999999999999
Q ss_pred -CCCC-----------cCCCccceEEEEEecCceEEEE-----------eecccccccCceEEEecEEEEEEecCCCCCC
Q 019162 166 -APGK-----------RRCNCRNEVYHKQIGPGMFQQM-----------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDG 222 (345)
Q Consensus 166 -c~g~-----------~~C~G~G~~~~~~~~~g~~~~~-----------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G 222 (345)
|.|+ +.|+|+|.+.... |++++. ..++|++|+|.|++.+.++++|.||||+++|
T Consensus 161 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G 237 (382)
T PRK14291 161 ACGGTGYDPGSGEKVCPTCGGSGEIYQRG---GFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDNG 237 (382)
T ss_pred CCccccCCCCCCCccCCCCCCceEEEEec---ceEEEEecCCCCCCceEEccCCCCCCCCceEEeeeEEEEEeCCCCCCC
Confidence 8774 4688888754442 333321 2678999999999999999999999999999
Q ss_pred cEEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcE
Q 019162 223 QEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEV 301 (345)
Q Consensus 223 ~~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~ 301 (345)
++|+|+|+|++. .++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+.++|.||+++++|++
T Consensus 238 ~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~ 317 (382)
T PRK14291 238 SKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDK 317 (382)
T ss_pred CEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCE
Confidence 999999999995 4788999999999999999999999999999999999999999999999998899999999999999
Q ss_pred EEECCCCcCCCCCCCCCcEEEEEEEECCC--CCC------HHHHHHHHHHh
Q 019162 302 RKFGGEGMPLHFSNKKGDLYITFEVLFPT--TLT------EDQKTRIKEVL 344 (345)
Q Consensus 302 ~ri~g~G~p~~~~~~~GDL~v~~~v~~P~--~l~------~~q~~~l~~~l 344 (345)
++|+|+|||..+...+|||||+|+|.||+ .|| ++|+++|+++.
T Consensus 318 i~i~G~G~p~~~~~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~ 368 (382)
T PRK14291 318 IRVPGKGMPRLKGSGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELD 368 (382)
T ss_pred EEECCCCCCCCCCCCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHH
Confidence 99999999987655579999999999998 599 99999999885
No 25
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=4.8e-72 Score=541.12 Aligned_cols=317 Identities=36% Similarity=0.594 Sum_probs=277.7
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC--CCC
Q 019162 26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA--GGG 103 (345)
Q Consensus 26 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--~~~ 103 (345)
|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+|+.+|+.||+||++++..+.. +++
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~ 79 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCC
Confidence 7999999999999999999999999999999998 6678899999999999999999999999999987653211 111
Q ss_pred CCC----CcccChhhhhhhhcCCCCC---CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162 104 RGG----GMGVNIQDIFSSFFGGGPM---EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------ 169 (345)
Q Consensus 104 ~~~----~~~~~~~d~F~~~fg~~~~---~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------ 169 (345)
+.+ ++ .++.|+|++|||++.. ......++++|+++.|+|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 80 ~~~~~~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 158 (354)
T TIGR02349 80 FNGFDIGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGT 158 (354)
T ss_pred cCCccccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCC
Confidence 110 12 1567999999985321 1123346799999999999999999999999999999999 8774
Q ss_pred -----cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecC
Q 019162 170 -----RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDG 231 (345)
Q Consensus 170 -----~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G 231 (345)
..|+|+|.+ ....+++|++++.+ .++|+.|+|.+++.+.+.++|.||+|+++|++|+|+|+|
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G 238 (354)
T TIGR02349 159 DPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKG 238 (354)
T ss_pred CCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCc
Confidence 468999984 44567899887643 677999999999999999999999999999999999999
Q ss_pred CCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcC
Q 019162 232 EPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP 310 (345)
Q Consensus 232 ~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p 310 (345)
++. .++.+|||+|+|++++|+.|+|+|+||++++.|||+||++|+++.|+|+|| .+.|.+|+++++|++++|+|+|||
T Consensus 239 ~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p 317 (354)
T TIGR02349 239 NAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVP 317 (354)
T ss_pred cCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCcC
Confidence 984 467789999999999999999999999999999999999999999999999 699999999999999999999999
Q ss_pred CCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 311 LHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 311 ~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
..+.+.+|||||+|+|.||+.|+.+|+++|+++|+
T Consensus 318 ~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~ 352 (354)
T TIGR02349 318 RLRGNGRGDLLVTVKVETPKNLSKEQKELLEELAE 352 (354)
T ss_pred CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 77655579999999999999999999999999984
No 26
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.6e-72 Score=542.39 Aligned_cols=318 Identities=34% Similarity=0.573 Sum_probs=274.5
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG 101 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~ 101 (345)
+..+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|++||+||+++++.....
T Consensus 2 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~ 80 (378)
T PRK14283 2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQE 80 (378)
T ss_pred CCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccccc
Confidence 34689999999999999999999999999999999998 57899999999999999999999999999998876421110
Q ss_pred C-----CCC---CCcccChhhhhhhh-cCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC--
Q 019162 102 G-----GRG---GGMGVNIQDIFSSF-FGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-- 169 (345)
Q Consensus 102 ~-----~~~---~~~~~~~~d~F~~~-fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-- 169 (345)
+ .+. ++++.++.++|+.| |+++. ....+++.|+++++.|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~---~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~ 157 (378)
T PRK14283 81 DIFNNINFEDIFQGFGFGIGNIFDMFGFGGGS---RHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRA 157 (378)
T ss_pred ccccccCccccccccccchhhhccccccCCCC---CCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCcccc
Confidence 0 000 11111345677776 65421 12245789999999999999999999999999999998 8774
Q ss_pred ---------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEE
Q 019162 170 ---------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF 227 (345)
Q Consensus 170 ---------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~ 227 (345)
+.|+|+|.+ ..++.++|++++.. .++|..|+|.|++.+.++++|.||||+++|++|+|
T Consensus 158 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l 237 (378)
T PRK14283 158 EPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV 237 (378)
T ss_pred CCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEE
Confidence 468899985 44566777775432 67899999999999999999999999999999999
Q ss_pred eecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECC
Q 019162 228 YEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGG 306 (345)
Q Consensus 228 ~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g 306 (345)
+|+|++. .++.+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|+|| .+.|.||+++++|+++||+|
T Consensus 238 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g 316 (378)
T PRK14283 238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKG 316 (378)
T ss_pred eccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECC
Confidence 9999984 457899999999999999999999999999999999999999999999999 68999999999999999999
Q ss_pred CCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 307 EGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 307 ~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
+|||..+...+|||||+|+|.||+.|+++|+++|++++
T Consensus 317 ~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~ 354 (378)
T PRK14283 317 HGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKELLREFA 354 (378)
T ss_pred CCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 99997665557999999999999999999999999987
No 27
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.3e-71 Score=537.84 Aligned_cols=321 Identities=31% Similarity=0.553 Sum_probs=274.2
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG 102 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 102 (345)
..+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.+.+++
T Consensus 3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~ 82 (386)
T PRK14289 3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG 82 (386)
T ss_pred ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCC
Confidence 35899999999999999999999999999999999997888999999999999999999999999999998765321111
Q ss_pred CCCCCcccChhhhhhhh---cCC---CC-----CC---CccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CC
Q 019162 103 GRGGGMGVNIQDIFSSF---FGG---GP-----ME---EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-AP 167 (345)
Q Consensus 103 ~~~~~~~~~~~d~F~~~---fg~---~~-----~~---~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~ 167 (345)
++++ .+.++.++|++| |++ +. +. ......++.|+++.+.|||||+|+|+++++.+++.+.|+ |.
T Consensus 83 ~~~~-~~~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~ 161 (386)
T PRK14289 83 GFSG-EGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCH 161 (386)
T ss_pred CCCC-CCcChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCC
Confidence 1111 112444554433 542 10 00 112245789999999999999999999999999999998 87
Q ss_pred CC-----------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCc
Q 019162 168 GK-----------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQ 223 (345)
Q Consensus 168 g~-----------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~ 223 (345)
|+ +.|+|+|.+ ...++++|++++.. .++|+.|+|.|++.+.++++|.||+|+++|+
T Consensus 162 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~ 241 (386)
T PRK14289 162 GTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGM 241 (386)
T ss_pred CCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCC
Confidence 64 468999985 44567778875432 6789999999999999999999999999999
Q ss_pred EEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEE
Q 019162 224 EVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVR 302 (345)
Q Consensus 224 ~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ 302 (345)
+|+|+|+|++. .++.+|||+|+|++++|+.|+|+++||++++.|||.+|++|+++.|+|+||+ +.|.||+++++|+++
T Consensus 242 ~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ 320 (386)
T PRK14289 242 QLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVL 320 (386)
T ss_pred EEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcEE
Confidence 99999999985 4678999999999999999999999999999999999999999999999996 899999999999999
Q ss_pred EECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 303 KFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 303 ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
||+|+|||..++..+|||||+|+|.||+.|+++|+++|+++++
T Consensus 321 ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~ 363 (386)
T PRK14289 321 RLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEKQTLEKMEN 363 (386)
T ss_pred EECCCCcCCCCCCCCCcEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 9999999976655579999999999999999999999999874
No 28
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-70 Score=533.46 Aligned_cols=316 Identities=31% Similarity=0.510 Sum_probs=275.4
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCCC
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGR 104 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~~ 104 (345)
.|||++|||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|+.||+||+++..+..+++++
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~ 80 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPF 80 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCccc
Confidence 59999999999999999999999999999999998 67789999999999999999999999999998753211111111
Q ss_pred CCCcccChhhhhhhhcCCCCCC---CccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------
Q 019162 105 GGGMGVNIQDIFSSFFGGGPME---EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------- 169 (345)
Q Consensus 105 ~~~~~~~~~d~F~~~fg~~~~~---~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------- 169 (345)
+++++++.|+|++|||++.+. ...+..++.|+++.+.|||+|+|+|+++++.+++.+.|+ |.|+
T Consensus 81 -~~~~~d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~ 159 (371)
T PRK14292 81 -GGMGFDPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKT 159 (371)
T ss_pred -CccCCChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCcc
Confidence 222347789999999863211 112346799999999999999999999999999999999 8764
Q ss_pred -cCCCccceEE-EEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC
Q 019162 170 -RRCNCRNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI 235 (345)
Q Consensus 170 -~~C~G~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~ 235 (345)
..|+|+|.+. ..+..+|++++.+ ..+|++|+|.|++.+.++++|.||+|+++|++|+|+|+|++.+
T Consensus 160 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~ 239 (371)
T PRK14292 160 CPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGP 239 (371)
T ss_pred CCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCC
Confidence 3688999854 4455678876433 7789999999999999999999999999999999999999977
Q ss_pred CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC
Q 019162 236 DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN 315 (345)
Q Consensus 236 ~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~ 315 (345)
++. |||+|+|++++|+.|+|+|+||++++.|||.||++|+++.|+|+||+ +.|.||+++++|++++|+|+|||..++.
T Consensus 240 ~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~~~ 317 (371)
T PRK14292 240 GGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQGA 317 (371)
T ss_pred CCC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCCCC
Confidence 666 99999999999999999999999999999999999999999999997 4899999999999999999999986655
Q ss_pred CCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 316 KKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 316 ~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
.+|||||+|+|.||+.|+++|+++|++++
T Consensus 318 ~~GDL~V~~~v~~P~~l~~~q~~ll~~~~ 346 (371)
T PRK14292 318 GTGDLIVEYEIAVPKQLSPEAREALEAYA 346 (371)
T ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 57999999999999999999999999986
No 29
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.3e-70 Score=530.12 Aligned_cols=318 Identities=31% Similarity=0.553 Sum_probs=274.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
..|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||.+|+.||.||++++..+.+.++
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~ 80 (374)
T PRK14293 2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPD 80 (374)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCC
Confidence 479999999999999999999999999999999998 5678899999999999999999999999999887652111001
Q ss_pred CCCCcccChhhhhhhhcCC-CC-C-----CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162 104 RGGGMGVNIQDIFSSFFGG-GP-M-----EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------ 169 (345)
Q Consensus 104 ~~~~~~~~~~d~F~~~fg~-~~-~-----~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------ 169 (345)
. ++++ ++.|+|++||++ +. . .......++.|+++.+.|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 81 ~-~~~~-~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~ 158 (374)
T PRK14293 81 M-GDMG-GFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGT 158 (374)
T ss_pred c-cccc-chHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCC
Confidence 0 1121 456899999963 11 0 0112345789999999999999999999999999999999 8764
Q ss_pred -----cCCCccceEE-EEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecC
Q 019162 170 -----RRCNCRNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDG 231 (345)
Q Consensus 170 -----~~C~G~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G 231 (345)
+.|+|+|.+. ..++++|++++.. +++|++|+|.+++.+.++++|.||||+++|++|+|+|+|
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G 238 (374)
T PRK14293 159 GPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEG 238 (374)
T ss_pred CCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCc
Confidence 4689999854 4457788887533 678999999999999999999999999999999999999
Q ss_pred CCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcC
Q 019162 232 EPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP 310 (345)
Q Consensus 232 ~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p 310 (345)
++. .+..+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+ ++|.||+++++|++++|+|+|||
T Consensus 239 ~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p 317 (374)
T PRK14293 239 DAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVP 317 (374)
T ss_pred cCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCC
Confidence 985 4567899999999999999999999999999999999999999999999996 89999999999999999999999
Q ss_pred CCCCC-CCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 311 LHFSN-KKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 311 ~~~~~-~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
..+.. .+|||||+|+|.||+.|+++|+++|+++|+
T Consensus 318 ~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~ 353 (374)
T PRK14293 318 RLGNPVARGDHLITVKVKIPTRISDEERELLEKLAK 353 (374)
T ss_pred CCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 76543 469999999999999999999999999873
No 30
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-70 Score=510.88 Aligned_cols=307 Identities=43% Similarity=0.757 Sum_probs=276.6
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG 102 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 102 (345)
....||+||||+++||.+|||+|||+||++||||+|++ |.++|++|++||||||||++|++||+||+++++.+.++
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~- 77 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG- 77 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC-
Confidence 35689999999999999999999999999999999995 67999999999999999999999999999998543322
Q ss_pred CCCCCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC----------cC
Q 019162 103 GRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RR 171 (345)
Q Consensus 103 ~~~~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------~~ 171 (345)
++++ . |++||+.+... .+...+++|+.+.++|||||+|+|.++++.++++.+|+ |+|. ..
T Consensus 78 ---~g~~-~----f~~~F~~g~~~-~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~ 148 (337)
T KOG0712|consen 78 ---GGFG-G----FSQFFGFGGNG-GRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTT 148 (337)
T ss_pred ---CCCc-c----HHHhccCCCcC-ccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCC
Confidence 2222 2 77777744322 23334499999999999999999999999999999999 8764 47
Q ss_pred CCccce-EEEEEecCceEEEEe---------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC
Q 019162 172 CNCRNE-VYHKQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI 235 (345)
Q Consensus 172 C~G~G~-~~~~~~~~g~~~~~~---------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~ 235 (345)
|+|+|. +..++.+||++|+++ ++.|+.|.|.+++.+.+.++|.|++|++++++|++.|++++.+
T Consensus 149 C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~ 228 (337)
T KOG0712|consen 149 CRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAP 228 (337)
T ss_pred CCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecC
Confidence 889998 677889999998765 7799999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeC--CcCCCCcEEEECCCCcCCCC
Q 019162 236 DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLHF 313 (345)
Q Consensus 236 ~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~--~~~~~g~~~ri~g~G~p~~~ 313 (345)
+..+||++|.|..++|+.|.|.|+||++..+|++.||++|+.+.+.|+||+.+.+.++ .++++|.+++|.|+|||+.+
T Consensus 229 g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~ 308 (337)
T KOG0712|consen 229 GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFR 308 (337)
T ss_pred CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999998865 58899999999999999988
Q ss_pred CCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 314 SNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 314 ~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
.+ .|||||+|.|+||+ +++++...|+.+|
T Consensus 309 ~~-~g~lyi~~~v~fp~-~~~~~~~~l~~~l 337 (337)
T KOG0712|consen 309 NP-KGDLYIKFEVKFPK-LSPSQLKMLEDLL 337 (337)
T ss_pred CC-CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence 76 89999999999999 9999999999886
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.2e-63 Score=466.87 Aligned_cols=266 Identities=37% Similarity=0.592 Sum_probs=230.4
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC--
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG-- 101 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~-- 101 (345)
.+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||.+|+.||+||++++..+..+
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 579999999999999999999999999999999998 67789999999999999999999999999998754321110
Q ss_pred -CCCC-CCc----ccChhhhhhhhcCC-CCCCC--------ccccccCCceeeeeehhheeeeccceEEEEEEeeeeeCC
Q 019162 102 -GGRG-GGM----GVNIQDIFSSFFGG-GPMEE--------DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPA 166 (345)
Q Consensus 102 -~~~~-~~~----~~~~~d~F~~~fg~-~~~~~--------~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c 166 (345)
++.+ +++ ..+++|+|++|||+ ++... ....+++.|+++.+.|||+|+|.|+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l-------- 153 (291)
T PRK14299 82 PGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEV-------- 153 (291)
T ss_pred CCCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEee--------
Confidence 0000 111 12678999999985 21110 1234679999999999999999999999865
Q ss_pred CCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEE
Q 019162 167 PGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRI 246 (345)
Q Consensus 167 ~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i 246 (345)
..++++|+||||+++|++|+++|+|++. |||+|+|
T Consensus 154 ----------------------------------------~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~i 188 (291)
T PRK14299 154 ----------------------------------------AGERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVV 188 (291)
T ss_pred ----------------------------------------CCEEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEEE
Confidence 2357899999999999999999999863 9999999
Q ss_pred EEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEE
Q 019162 247 RTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV 326 (345)
Q Consensus 247 ~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v 326 (345)
++++|+.|+|+|+||+++++||+.+|++|+++.|+|+||+ +.|+||+++++|+++||+|+|||... +.+|||||+|+|
T Consensus 189 ~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~~-~~~GDL~v~~~V 266 (291)
T PRK14299 189 RLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRGP-AGRGDQYAEVRI 266 (291)
T ss_pred EEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCCCC-CCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999996 89999999999999999999999643 347999999999
Q ss_pred ECCCCCCHHHHHHHHHHhC
Q 019162 327 LFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 327 ~~P~~l~~~q~~~l~~~l~ 345 (345)
.+|+.|+++|+++|+++++
T Consensus 267 ~~P~~l~~~~~~~l~~l~~ 285 (291)
T PRK14299 267 TIPTRPTPEEERLYKQLAE 285 (291)
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 9999999999999999863
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=2.8e-61 Score=456.92 Aligned_cols=283 Identities=27% Similarity=0.441 Sum_probs=237.0
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc----cccCc
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG----LKQHA 99 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~----~~~~~ 99 (345)
.+|||++|||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|+.||+||+.. +....
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~ 81 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQF 81 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccccc
Confidence 479999999999999999999999999999999987 5678999999999999999999999999998642 21100
Q ss_pred CCCCCCCCc-ccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccce
Q 019162 100 AGGGRGGGM-GVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNE 177 (345)
Q Consensus 100 ~~~~~~~~~-~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~ 177 (345)
+. +.+..+ ..++.++|+.|||++.. ......+++.|+.+++.|||+|+|+|+++++.+++.+ |+|.|.
T Consensus 82 ~~-~~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~---------~~g~G~ 151 (306)
T PRK10266 82 QH-GDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV---------YNAFGM 151 (306)
T ss_pred cc-CCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc---------ccCCCe
Confidence 00 001111 12678999999985221 1122345789999999999999999999999887643 222221
Q ss_pred EEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCccc
Q 019162 178 VYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRR 256 (345)
Q Consensus 178 ~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r 256 (345)
+ + ....++++|.||+|+++|++|+++|+|++.. +..+|||+|+|+++||+.|+|
T Consensus 152 ~----------~---------------~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r 206 (306)
T PRK10266 152 I----------E---------------QEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDI 206 (306)
T ss_pred E----------E---------------EeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEE
Confidence 1 0 1124689999999999999999999999854 567899999999999999999
Q ss_pred ccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHH
Q 019162 257 EGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQ 336 (345)
Q Consensus 257 ~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q 336 (345)
+|+||++++.||+.+|++|+++.|+|++|+ +.|++|+++++|++++|+|+|||..+ .+|||||+|+|.+|+.|+++|
T Consensus 207 ~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~~--~~GdL~v~~~v~~P~~l~~~q 283 (306)
T PRK10266 207 VGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSKK--QTGDLYAVLKIVMPPKPDEKT 283 (306)
T ss_pred eCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCCC--CCCCEEEEEEEECCCCCCHHH
Confidence 999999999999999999999999999996 89999999999999999999999753 479999999999999999999
Q ss_pred HHHHHHHhC
Q 019162 337 KTRIKEVLG 345 (345)
Q Consensus 337 ~~~l~~~l~ 345 (345)
+++|+++++
T Consensus 284 ~~l~~~l~~ 292 (306)
T PRK10266 284 AALWQQLAD 292 (306)
T ss_pred HHHHHHHHh
Confidence 999999863
No 33
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-52 Score=387.12 Aligned_cols=312 Identities=54% Similarity=0.897 Sum_probs=276.5
Q ss_pred hhccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccC
Q 019162 19 LNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQH 98 (345)
Q Consensus 19 ~~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 98 (345)
......+|||++|||+++||.+|||+|||+||++||||+||++|.|.+.|++|+.||||||||++|+.||+||++++...
T Consensus 10 ~~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~ 89 (336)
T KOG0713|consen 10 EAVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDE 89 (336)
T ss_pred hhhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccc
Confidence 34455789999999999999999999999999999999999999999999999999999999999999999999998743
Q ss_pred cCCCCCCCCcccChhhhhhhhcCCC-----CCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCC
Q 019162 99 AAGGGRGGGMGVNIQDIFSSFFGGG-----PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCN 173 (345)
Q Consensus 99 ~~~~~~~~~~~~~~~d~F~~~fg~~-----~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~ 173 (345)
.-. +.+++.| .++|+.||+.- +........+|.++...++.+++++|.|...+...++.+.|+|+|+..|+
T Consensus 90 ~~~-~~~g~~~---~~~f~~~f~dfg~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~ 165 (336)
T KOG0713|consen 90 NKD-GEGGGGG---NDIFSAFFGDFGVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCN 165 (336)
T ss_pred ccc-cccCCcc---cchHHHhhcccccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccC
Confidence 211 1111111 46666666521 11123347789999999999999999999999999999999999999999
Q ss_pred ccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCC
Q 019162 174 CRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDR 253 (345)
Q Consensus 174 G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~ 253 (345)
++-.+..++.++|.+++.+...|..|.+.+...+....++.+..|...|....+..+|.+...+.+||+.+.+..-+|+.
T Consensus 166 ~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~ 245 (336)
T KOG0713|consen 166 CRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPR 245 (336)
T ss_pred ChhhheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred cccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC-CCCcEEEEEEEECCC-C
Q 019162 254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPT-T 331 (345)
Q Consensus 254 f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~-~~GDL~v~~~v~~P~-~ 331 (345)
|.|.++|+++++.+++.+++.|+..++.++|+..+.+....++.++..++.+++|||....+ ..|.+|++|.+.+|. .
T Consensus 246 ~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~ 325 (336)
T KOG0713|consen 246 FERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSS 325 (336)
T ss_pred eecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccc
Confidence 99999999999999999999999999999999888888888999999999999999966543 349999999999996 4
Q ss_pred CCH
Q 019162 332 LTE 334 (345)
Q Consensus 332 l~~ 334 (345)
++.
T Consensus 326 ~~~ 328 (336)
T KOG0713|consen 326 LSD 328 (336)
T ss_pred cch
Confidence 565
No 34
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=3e-44 Score=360.03 Aligned_cols=159 Identities=15% Similarity=0.154 Sum_probs=142.9
Q ss_pred CceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEE
Q 019162 135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVD 214 (345)
Q Consensus 135 ~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~ 214 (345)
-++.+.+.|||+++|+||++++.+.|.+.|. .|...+.+.++++|+
T Consensus 657 ~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g----------------------------------~G~ktvkE~ktLeVk 702 (871)
T TIGR03835 657 VNLVYEEEVPQILFFNNQIKEIKYTRHTVDG----------------------------------NTESTTNEAITLEIQ 702 (871)
T ss_pred cceEEecccCHHHHhCCCeEEEEEEEeeccC----------------------------------CCcceeeeeEEEEEe
Confidence 4788999999999999999999998887642 133445677899999
Q ss_pred ecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCC
Q 019162 215 IEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKG 294 (345)
Q Consensus 215 Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~ 294 (345)
||+|+++|++|+|+|+|+..+++. |||+|+|+++||+.|+|+|+||++++.|+|.+||+|+++.|+||||+ +.|.||+
T Consensus 703 IPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPp 780 (871)
T TIGR03835 703 LPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPG 780 (871)
T ss_pred cCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCC
Confidence 999999999999999999876664 99999999999999999999999999999999999999999999997 8999999
Q ss_pred cCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEE-CCC
Q 019162 295 ITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVL-FPT 330 (345)
Q Consensus 295 ~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~-~P~ 330 (345)
++++|+++||+|+|||..+ +.+|||||+|.|. +++
T Consensus 781 gTqpGqvLRIkGKGMP~~~-~~RGDLyV~f~V~~~~k 816 (871)
T TIGR03835 781 GIKVNDQVIFKDLGLTKTK-YDKGSLIVHLYYSSVMK 816 (871)
T ss_pred CCCCCcEEEECCCCCCCCC-CCCCCEEEEEEEeeccc
Confidence 9999999999999999543 3479999999997 454
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.7e-37 Score=285.76 Aligned_cols=232 Identities=32% Similarity=0.511 Sum_probs=191.1
Q ss_pred hhhccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162 18 ALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ 97 (345)
Q Consensus 18 ~~~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 97 (345)
+.......|||+||||+++|+..|||+||++||++||||.|. +.+|.++|++|.+|||+|+|+++|+.||.+|..+.
T Consensus 36 ~s~~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~-~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~-- 112 (288)
T KOG0715|consen 36 ASRIISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNK-DKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH-- 112 (288)
T ss_pred ecccCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc--
Confidence 333444459999999999999999999999999999999998 45899999999999999999999999999987641
Q ss_pred CcCCCCCCCCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-------
Q 019162 98 HAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------- 169 (345)
Q Consensus 98 ~~~~~~~~~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------- 169 (345)
++++.++.++|..+|+++ ..+...+.+.++.+.++|++|..|+.+.+.++....|. |.+.
T Consensus 113 --------~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~ 180 (288)
T KOG0715|consen 113 --------GEFGGNPFDVFLEFFGGK----MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAK 180 (288)
T ss_pred --------ccccCCccchHHHhhccc----ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccc
Confidence 011127889999999761 22334567888999999999999999999999999998 7664
Q ss_pred ----cCCCccceEEEEEe-cCceE--------EEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCC
Q 019162 170 ----RRCNCRNEVYHKQI-GPGMF--------QQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKID 236 (345)
Q Consensus 170 ----~~C~G~G~~~~~~~-~~g~~--------~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~ 236 (345)
..|.|.|....... .+.+. .....+.|..|.|.+.+...+.+.|.+|+|+.++.+|++.+.|+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~--- 257 (288)
T KOG0715|consen 181 RESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND--- 257 (288)
T ss_pred cccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc---
Confidence 46888885333221 11111 122255599999999999999999999999999999999998874
Q ss_pred CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHH
Q 019162 237 GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQ 271 (345)
Q Consensus 237 ~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~e 271 (345)
||+|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus 258 ----~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 258 ----DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred ----eEEEEEEeccCcccccccCcccccccccccC
Confidence 9999999999999999999999999998754
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=1.3e-24 Score=203.69 Aligned_cols=254 Identities=37% Similarity=0.612 Sum_probs=196.1
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCccccccCcC-C
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-G 101 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~ 101 (345)
..|||++|+|.++|+.++|++||+++|++||||+|+.. ..|..+|++|++||++|+|+.+|..||+||++++.+... .
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~ 81 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS 81 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence 57999999999999999999999999999999999855 245568999999999999999999999999966654111 1
Q ss_pred CCCCCC----cccChhhhhhhhcCCC-CCC-----------------------------C-----------ccccccCCc
Q 019162 102 GGRGGG----MGVNIQDIFSSFFGGG-PME-----------------------------E-----------DEKIVKGDD 136 (345)
Q Consensus 102 ~~~~~~----~~~~~~d~F~~~fg~~-~~~-----------------------------~-----------~~~~~kg~d 136 (345)
.....+ .-.++.+.|..|||.. +.. . .....+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T KOG0714|consen 82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP 161 (306)
T ss_pred CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence 111111 0124456677777621 000 0 001122233
Q ss_pred eeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEec
Q 019162 137 VIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIE 216 (345)
Q Consensus 137 i~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip 216 (345)
+...+.+++++.+.|+.+...+.+...-.. ... .........+.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~----~~~~~~~~~~~~~ 207 (306)
T KOG0714|consen 162 VEHPLRVSLEDLYKGESKKMKISRQSFTSN------------------------------GRE----GSSRSRYLSISIK 207 (306)
T ss_pred ccCCcceeHHHhccccceeeecccccccCC------------------------------ccc----ccCccceeEEecc
Confidence 444555578888888877777754432210 000 1346778899999
Q ss_pred CCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcccccCCeeEE--EEecHHHHhcCcEEEEEcCCCcEEEEEeC-
Q 019162 217 KGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTT--VTVTLVQALVGFEKTIEHLDEHLVDISTK- 293 (345)
Q Consensus 217 ~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~--~~Isl~eAl~G~~~~i~~ldg~~i~v~i~- 293 (345)
+++..|+.+....+|+..++..|-++++.+..++|+.|.+.+.||... ..|++.+|++|....++++++..+.+.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (306)
T KOG0714|consen 208 PGWKEGTKITFPEEGDEEPGILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINK 287 (306)
T ss_pred CCcccccceeccccccccCCcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccc
Confidence 999999999999999988888899999999999999999999999999 99999999999999999999988777777
Q ss_pred CcCCCCcEEEECCCCcCC
Q 019162 294 GITKPKEVRKFGGEGMPL 311 (345)
Q Consensus 294 ~~~~~g~~~ri~g~G~p~ 311 (345)
..+.++...+++++|+|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 288 DLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred cccCCCceeeecCCCCCC
Confidence 888999999999999985
No 37
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.87 E-value=5.7e-22 Score=151.80 Aligned_cols=80 Identities=35% Similarity=0.543 Sum_probs=69.4
Q ss_pred CeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC-CCCcEEEEEEEECCCCCCHHHHH
Q 019162 260 NLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKT 338 (345)
Q Consensus 260 DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~-~~GDL~v~~~v~~P~~l~~~q~~ 338 (345)
||+++++||++||++|++++|+|+||+.+.|++|+++++|++++|+|+|||...++ .+|||||+|+|.||++||++|++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~ 80 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE 80 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence 89999999999999999999999999999999999999999999999999987665 67999999999999999999987
Q ss_pred H
Q 019162 339 R 339 (345)
Q Consensus 339 ~ 339 (345)
+
T Consensus 81 l 81 (81)
T PF01556_consen 81 L 81 (81)
T ss_dssp H
T ss_pred C
Confidence 5
No 38
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=2.1e-19 Score=161.18 Aligned_cols=192 Identities=31% Similarity=0.448 Sum_probs=132.3
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHH-HHHHHHHHHHHHHHhccccccccccccC-ccccccCc
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE-ANKRFAEINNAYEVLSDSETRNIYDTYG-EEGLKQHA 99 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~-a~~~f~~i~~Ay~~L~d~~~r~~yd~~g-~~~~~~~~ 99 (345)
....+||+||||+++|+..||++|||++|++||||+++.++. |.+.|+.|++||++|+|+.+|..||+++ ........
T Consensus 3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~ 82 (237)
T COG2214 3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKS 82 (237)
T ss_pred hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCcccc
Confidence 456799999999999999999999999999999999997775 9999999999999999999999999973 32221110
Q ss_pred CCCCCC-CCcc-cChhhhhhhhcCCCCC----------------C------------CccccccCC-ceeeeeehhheee
Q 019162 100 AGGGRG-GGMG-VNIQDIFSSFFGGGPM----------------E------------EDEKIVKGD-DVIVELDATLEDL 148 (345)
Q Consensus 100 ~~~~~~-~~~~-~~~~d~F~~~fg~~~~----------------~------------~~~~~~kg~-di~~~l~itlee~ 148 (345)
...... .... ..+.+++..+++.... . ......... +....+.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (237)
T COG2214 83 YRESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLSGLAAALSLFADEAALRSGSLRRRDLAANLADNFEEA 162 (237)
T ss_pred ccccccccccccccHHHHHHhhcccccccccccchhhhcccccccccccccccccccccccccccccceeeeeeccHHHH
Confidence 000000 0000 1344444444432100 0 000000000 3444455555555
Q ss_pred eccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEe
Q 019162 149 YMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFY 228 (345)
Q Consensus 149 ~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~ 228 (345)
+.+....+... ......+.+|.|+..+..+++.
T Consensus 163 ~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 195 (237)
T COG2214 163 LAGVKKAVARL-----------------------------------------------LGKALKSTIKAGALEGKALRLK 195 (237)
T ss_pred hcCcceeeecc-----------------------------------------------ccccccccCCcccccCceeeec
Confidence 55544444321 1223338999999999999999
Q ss_pred ecCCCCCCCCCceEEEEEEEcCCCCcccccCCe
Q 019162 229 EDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNL 261 (345)
Q Consensus 229 g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL 261 (345)
+++.... +..++.+..+..++|+.|...++++
T Consensus 196 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (237)
T COG2214 196 GLLKSAR-GALGKARLKELSKRHPPFALEGDDK 227 (237)
T ss_pred ccCCcCC-CCcccceeeeeccCCCCccccCCcc
Confidence 9998766 8889999999999999999999999
No 39
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=1.1e-20 Score=170.36 Aligned_cols=73 Identities=59% Similarity=0.990 Sum_probs=69.9
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK 96 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 96 (345)
..|+|++|||+++|+.++||||||+|+++||||+++++|++.++|++||+||+||+||.+|..||.||+.++.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~ 102 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK 102 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence 4579999999999999999999999999999999998899999999999999999999999999999998775
No 40
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=5.9e-20 Score=170.93 Aligned_cols=90 Identities=44% Similarity=0.786 Sum_probs=79.2
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 103 (345)
..|||++|||+.+||.+||++|||+.|++||||+||+||.|.++|+.+.+||+||+|+..|..||++|..+....
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~----- 78 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ----- 78 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch-----
Confidence 679999999999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred CCCCcccChhhhhhhhcCC
Q 019162 104 RGGGMGVNIQDIFSSFFGG 122 (345)
Q Consensus 104 ~~~~~~~~~~d~F~~~fg~ 122 (345)
++ .+..++|...|++
T Consensus 79 ---~~-~d~~~~~r~~f~~ 93 (296)
T KOG0691|consen 79 ---GR-EDQADGFRKKFGS 93 (296)
T ss_pred ---hh-hhHHHHHHHHhhh
Confidence 11 1667777777764
No 41
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.78 E-value=1.8e-19 Score=185.86 Aligned_cols=75 Identities=36% Similarity=0.686 Sum_probs=69.3
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK 96 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 96 (345)
+...++||++|||+++||..+||+|||+||++||||+++++ .|.++|++|++||+|||||.+|+.||+||..++.
T Consensus 569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 34568999999999999999999999999999999999854 6889999999999999999999999999988764
No 42
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=3.4e-19 Score=170.48 Aligned_cols=77 Identities=52% Similarity=0.813 Sum_probs=70.1
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ 97 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 97 (345)
+.+.+.||++|||.++|+..+||++||+||++||||+||+. .+|.++|+.|+.||+|||||+.|++||.+-++-|.+
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~ 81 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRG 81 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcC
Confidence 45678999999999999999999999999999999999855 579999999999999999999999999987766643
No 43
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=5.5e-19 Score=169.06 Aligned_cols=74 Identities=49% Similarity=0.894 Sum_probs=68.6
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---HHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN---EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK 96 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 96 (345)
...|||.+|+|+++||.+||++|||++++.||||+..+. ..|++.|+.|.+||||||||.+|++||.||++|++
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 356999999999999999999999999999999998632 34899999999999999999999999999999997
No 44
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.73 E-value=2e-18 Score=125.96 Aligned_cols=63 Identities=60% Similarity=1.016 Sum_probs=59.6
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH-HHHHHHHHHHHHHHHhcccccccccc
Q 019162 26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE-EANKRFAEINNAYEVLSDSETRNIYD 88 (345)
Q Consensus 26 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd 88 (345)
|||+||||+++++.++||+||+++++++|||+++.+. .+.+.|+.|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999987554 68899999999999999999999998
No 45
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.72 E-value=5.3e-18 Score=157.75 Aligned_cols=77 Identities=47% Similarity=0.744 Sum_probs=68.4
Q ss_pred hhccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH---HHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162 19 LNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE---EANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 95 (345)
Q Consensus 19 ~~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~---~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 95 (345)
......+|||+||||.++|+..||.||||++|.+||||-..+.. .|+++|-.|..|-|||+||++|++||. |++.+
T Consensus 388 kkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPL 466 (504)
T KOG0624|consen 388 KKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPL 466 (504)
T ss_pred HHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCC
Confidence 34566799999999999999999999999999999999988443 389999999999999999999999996 66655
Q ss_pred c
Q 019162 96 K 96 (345)
Q Consensus 96 ~ 96 (345)
+
T Consensus 467 D 467 (504)
T KOG0624|consen 467 D 467 (504)
T ss_pred C
Confidence 4
No 46
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=5.4e-18 Score=149.44 Aligned_cols=72 Identities=47% Similarity=0.821 Sum_probs=66.0
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CcHHHHHHHHHHHHHHHHhccccccccccccCcc
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQ--GNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE 93 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~--~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 93 (345)
...+|+|+||||.++|+..+|++||++||++||||+++ ...+|.++|+.++.||.||+|.++|+.||..|.-
T Consensus 11 f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i 84 (264)
T KOG0719|consen 11 FNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI 84 (264)
T ss_pred ccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence 34569999999999999999999999999999999994 3467999999999999999999999999998864
No 47
>PHA03102 Small T antigen; Reviewed
Probab=99.70 E-value=1.6e-17 Score=140.64 Aligned_cols=86 Identities=22% Similarity=0.364 Sum_probs=72.8
Q ss_pred CcccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC
Q 019162 24 GKSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG 101 (345)
Q Consensus 24 ~~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~ 101 (345)
.+.+|++|||+++| |.++||+|||++|+++|||+++ + .++|++|++||++|+|+.+|..||.+|++.....
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg-~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~--- 76 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG-D---EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE--- 76 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc-h---hHHHHHHHHHHHHHhhHHHhccccccCCcccccc---
Confidence 35689999999999 9999999999999999999986 3 3799999999999999999999999997654211
Q ss_pred CCCCCCcccChhhhhhhhcCCC
Q 019162 102 GGRGGGMGVNIQDIFSSFFGGG 123 (345)
Q Consensus 102 ~~~~~~~~~~~~d~F~~~fg~~ 123 (345)
. ..+.++|..+||+.
T Consensus 77 ----~---~~~~~~f~~~fg~~ 91 (153)
T PHA03102 77 ----E---DVPSGYVGATFGDR 91 (153)
T ss_pred ----c---ccHHHHhhhhcCCc
Confidence 0 13678888888764
No 48
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.66 E-value=1.6e-16 Score=114.22 Aligned_cols=59 Identities=69% Similarity=1.095 Sum_probs=54.7
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cHHHHHHHHHHHHHHHHhccccc
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG-NEEANKRFAEINNAYEVLSDSET 83 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~-~~~a~~~f~~i~~Ay~~L~d~~~ 83 (345)
+|||++|||+++++.++||+||+++++++|||++++ .+.+.+.|++|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999999999986 56788999999999999999853
No 49
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=2.6e-16 Score=137.69 Aligned_cols=71 Identities=39% Similarity=0.740 Sum_probs=64.9
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG 94 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 94 (345)
..|+|+||||+++||.+|||+|||+|+++||||++++-.+.++.|..|++||+.|+|+..|..|..||...
T Consensus 98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD 168 (230)
T KOG0721|consen 98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD 168 (230)
T ss_pred cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence 45999999999999999999999999999999999843556788999999999999999999999999753
No 50
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.63 E-value=5.3e-16 Score=109.48 Aligned_cols=55 Identities=69% Similarity=1.113 Sum_probs=51.8
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcc
Q 019162 26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80 (345)
Q Consensus 26 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d 80 (345)
|||++|||+++++.++||++|++|+++||||++++...+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6999999999999999999999999999999998546788999999999999986
No 51
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=1.2e-15 Score=136.06 Aligned_cols=67 Identities=45% Similarity=0.760 Sum_probs=62.7
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccc
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
...+|.|++|||+++|+.+||.+|||+||++||||+++ ++++.+.|..|..|||+|.|.+.|..||-
T Consensus 30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r-~~e~k~~F~~iAtayeilkd~e~rt~ydy 96 (329)
T KOG0722|consen 30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNR-DPESKKLFVKIATAYEILKDNETRTQYDY 96 (329)
T ss_pred ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccC-CchhhhhhhhhhcccccccchhhHHhHHH
Confidence 44589999999999999999999999999999999998 56677999999999999999999999995
No 52
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.1e-14 Score=138.43 Aligned_cols=97 Identities=44% Similarity=0.766 Sum_probs=79.1
Q ss_pred HHhhhccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162 16 CYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEG 94 (345)
Q Consensus 16 ~~~~~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 94 (345)
-..+..++.+|||.|||++++||..|||+|||++|+.||||++.++ .+++.+|++|-+||.+|+||.+|..||.- ..
T Consensus 364 ~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg-~d- 441 (486)
T KOG0550|consen 364 QLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG-QD- 441 (486)
T ss_pred HHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc-cc-
Confidence 3455677789999999999999999999999999999999999877 78999999999999999999999999962 11
Q ss_pred cccCcCCCCCCCCcccChhhhhhhh
Q 019162 95 LKQHAAGGGRGGGMGVNIQDIFSSF 119 (345)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~F~~~ 119 (345)
+.. .+ +++.+++|.++|..|
T Consensus 442 le~--~~---~~~a~~dp~~~~~a~ 461 (486)
T KOG0550|consen 442 LEE--VG---SGGAGFDPFNIFRAF 461 (486)
T ss_pred hhh--hc---CCCcCcChhhhhhhc
Confidence 111 11 112345888888877
No 53
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=4.7e-14 Score=122.75 Aligned_cols=65 Identities=26% Similarity=0.461 Sum_probs=57.7
Q ss_pred cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccccccccc
Q 019162 25 KSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 25 ~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
.|||++|||++. ++..+|+++||++++++|||+..+.+ .|.+.|+.||+||++|+||.+|+.|+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999995 68899999999999999999976442 256789999999999999999999984
No 54
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=6.8e-14 Score=121.04 Aligned_cols=65 Identities=31% Similarity=0.538 Sum_probs=57.3
Q ss_pred cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcHH---HHHHHHHHHHHHHHhccccccccccc
Q 019162 25 KSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEE---ANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 25 ~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
.|||++|||++. ++..+|+++||++++++|||++.+..+ +.+.+..||+||++|+||.+|+.|+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL 71 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML 71 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 589999999996 789999999999999999999874322 34568899999999999999999974
No 55
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.43 E-value=1.6e-13 Score=119.33 Aligned_cols=67 Identities=27% Similarity=0.408 Sum_probs=59.8
Q ss_pred CCcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcHH-----HHHHHHHHHHHHHHhccccccccccc
Q 019162 23 AGKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEE-----ANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 23 ~~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
...|||++|||++. .+..+|+++||+|++++|||++.+.++ +.+.|+.||+||++|+||.+|+.|+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 46899999999996 578999999999999999999865432 56789999999999999999999984
No 56
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.43 E-value=1.6e-13 Score=119.79 Aligned_cols=66 Identities=23% Similarity=0.400 Sum_probs=57.8
Q ss_pred CcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcHH-----HHHHHHHHHHHHHHhccccccccccc
Q 019162 24 GKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEE-----ANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 24 ~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
..|||++|||++. ++..+|+++||+|++++|||+++..++ +.+.++.||+||++|+||.+|+.|+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 4799999999995 689999999999999999999875544 34456899999999999999999984
No 57
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=5.2e-13 Score=128.44 Aligned_cols=66 Identities=38% Similarity=0.571 Sum_probs=63.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTY 90 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 90 (345)
.+|.|.+|||++++|.++|||.||++|+..|||+|. .+.|++.|+.++.|||+|+|+++|+.||.-
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e 299 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLE 299 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 689999999999999999999999999999999998 888999999999999999999999999963
No 58
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.35 E-value=1e-12 Score=105.89 Aligned_cols=52 Identities=29% Similarity=0.481 Sum_probs=47.3
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhc
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLS 79 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~ 79 (345)
..++|+||||+++||.+|||++||+|++++|||+++ ++ +.|++|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s~---~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-ST---YIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHHh
Confidence 469999999999999999999999999999999964 43 67899999999995
No 59
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.28 E-value=3.9e-12 Score=118.44 Aligned_cols=58 Identities=41% Similarity=0.584 Sum_probs=51.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--c-----HHHHHHHHHHHHHHHHhccc
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG--N-----EEANKRFAEINNAYEVLSDS 81 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~--~-----~~a~~~f~~i~~Ay~~L~d~ 81 (345)
-.|+|++|||+++||.+|||+|||+|+++||||++.+ . +.|+++|++|++||++|+..
T Consensus 199 ~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 199 LEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred HHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3699999999999999999999999999999999742 1 35889999999999999853
No 60
>PHA02624 large T antigen; Provisional
Probab=99.23 E-value=1e-11 Score=125.11 Aligned_cols=61 Identities=23% Similarity=0.462 Sum_probs=56.5
Q ss_pred CCcccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccc
Q 019162 23 AGKSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIY 87 (345)
Q Consensus 23 ~~~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~y 87 (345)
..+++|++|||+++| +.++||+|||++|++||||+++ + .++|++|++||++|+|+.+|..|
T Consensus 9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-d---eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-D---EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-c---HHHHHHHHHHHHHHhcHHHhhhc
Confidence 346899999999999 9999999999999999999975 3 37999999999999999999998
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.23 E-value=9e-12 Score=119.40 Aligned_cols=73 Identities=34% Similarity=0.651 Sum_probs=65.5
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----cHHHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG-----NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 95 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 95 (345)
..-|+||||||+.++|..+||++||+|++|+|||+-++ ..+-++.+.+|++||+.|+|+..|..|-.||.-..
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~ 173 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDS 173 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCC
Confidence 34599999999999999999999999999999999764 14578999999999999999999999999987543
No 62
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.03 E-value=3.3e-10 Score=98.56 Aligned_cols=64 Identities=22% Similarity=0.339 Sum_probs=56.4
Q ss_pred cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhcccccccccc
Q 019162 25 KSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYD 88 (345)
Q Consensus 25 ~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd 88 (345)
.|||++|||++. .+..+++++|++|.+++|||+..... .+.+.-..||+||.+|+||.+|+.|=
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YL 72 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAI 72 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHH
Confidence 599999999995 89999999999999999999986443 24566789999999999999999985
No 63
>PRK14282 chaperone protein DnaJ; Provisional
Probab=98.97 E-value=6.9e-10 Score=108.23 Aligned_cols=87 Identities=23% Similarity=0.315 Sum_probs=75.3
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||+||+.|+++.|..- ..+.
T Consensus 272 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dG~~ 304 (369)
T PRK14282 272 KRSGSDLIYDVTIDYLQAILGTTVEVPLP-----------------------------------------------EGGT 304 (369)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEeCC-----------------------------------------------CCcE
Confidence 35699999999999999999998888541 3356
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEE
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTT 264 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~ 264 (345)
++|.||+|+++|++++|+|+|.+.. ++.+|||||++++..|+.|++++.+|+..
T Consensus 305 i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 305 TMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred EEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 8999999999999999999999853 45689999999999999999999887654
No 64
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.94 E-value=9.9e-10 Score=94.37 Aligned_cols=53 Identities=28% Similarity=0.453 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccccccccc
Q 019162 37 ASDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 37 as~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
.+..+|+++||++++++|||+.++.. .+.+.|+.||+||++|+||.+|+.|+.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL 60 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML 60 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 47789999999999999999965332 267889999999999999999999985
No 65
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.93 E-value=3.8e-09 Score=99.82 Aligned_cols=72 Identities=24% Similarity=0.379 Sum_probs=65.2
Q ss_pred cccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCC
Q 019162 254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTL 332 (345)
Q Consensus 254 f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l 332 (345)
+.|.|.|+++++.|||.||++|+++.| +++|++++|.||+++++|++++++|+|++. |||||+|+|.-+..+
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f 196 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG------GDLYLVVRLLPHPVF 196 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC------CCEEEEEEEcCCCCe
Confidence 457899999999999999999999998 678888999999999999999999999973 999999999876654
No 66
>PRK14290 chaperone protein DnaJ; Provisional
Probab=98.88 E-value=2.3e-09 Score=104.44 Aligned_cols=87 Identities=21% Similarity=0.307 Sum_probs=75.4
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.+.|.|+++++.|||.||+.|++++|.. -...
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~I~~------------------------------------------------~~g~ 297 (365)
T PRK14290 266 QRINDDLYVDQKINFPQAALGGEIEIKL------------------------------------------------FREK 297 (365)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEEc------------------------------------------------CCce
Confidence 3568999999999999999999988864 1235
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCeeEEE
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLHTTV 265 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~~~~ 265 (345)
++|.||+|+++|++++++|+|.+.++ ..+|||+|++++..|+.|++++.+|+.++
T Consensus 298 i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 298 YNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 89999999999999999999998544 46899999999999999999998887653
No 67
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.84 E-value=3.4e-09 Score=91.94 Aligned_cols=68 Identities=37% Similarity=0.604 Sum_probs=60.1
Q ss_pred hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccc
Q 019162 20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIY 87 (345)
Q Consensus 20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~y 87 (345)
++.-+-|+|++|.|.++.+.++||+.||+|+...|||+|+++ +.|...|.-+..||..|-|+.-|..-
T Consensus 48 styfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~ 116 (250)
T KOG1150|consen 48 STYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRC 116 (250)
T ss_pred ccccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 344567899999999999999999999999999999999988 56889999999999999998755433
No 68
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.84 E-value=4.3e-09 Score=80.36 Aligned_cols=72 Identities=24% Similarity=0.468 Sum_probs=55.4
Q ss_pred ceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEe
Q 019162 136 DVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDI 215 (345)
Q Consensus 136 di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~I 215 (345)
|+.+++.|||.||+.|+++++..- ..+.++|.|
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l-----------------------------------------------~g~~~~i~i 33 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL-----------------------------------------------DGKTIKIKI 33 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T-----------------------------------------------TS-EEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC-----------------------------------------------CCCEEEEec
Confidence 688999999999999999888541 346899999
Q ss_pred cCCCCCCcEEEEeecCCCC-CC-CCCceEEEEEEEcCCCCc
Q 019162 216 EKGMQDGQEVVFYEDGEPK-ID-GEPGDLKFRIRTAPHDRF 254 (345)
Q Consensus 216 p~G~~~G~~i~~~g~G~~~-~~-~~~GDL~v~i~~~~h~~f 254 (345)
|+|+++|++++++|+|.+. .+ +..|||+|++++.-...+
T Consensus 34 p~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~l 74 (81)
T PF01556_consen 34 PPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKL 74 (81)
T ss_dssp TST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SST
T ss_pred cCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCC
Confidence 9999999999999999973 33 379999999999844433
No 69
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=4.9e-09 Score=94.88 Aligned_cols=76 Identities=33% Similarity=0.439 Sum_probs=65.3
Q ss_pred HHhhhccCCcccccccCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162 16 CYALNVIAGKSYYEVLQVPR---GASDEQIKRAYRKLALKYHPDKN--QGNEEANKRFAEINNAYEVLSDSETRNIYDTY 90 (345)
Q Consensus 16 ~~~~~~~~~~~~y~iLgv~~---~as~~eIk~ayr~la~~~hPd~~--~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 90 (345)
.+-+..+...|+|.+|||+. .|++.+|.+|+++...+||||+. +++....+.|+.|+.||++|+|+.+|.+||..
T Consensus 34 ~~d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~ 113 (379)
T COG5269 34 REDFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN 113 (379)
T ss_pred hhhhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence 34455667789999999988 78999999999999999999997 23445668999999999999999999999975
Q ss_pred C
Q 019162 91 G 91 (345)
Q Consensus 91 g 91 (345)
-
T Consensus 114 d 114 (379)
T COG5269 114 D 114 (379)
T ss_pred c
Confidence 4
No 70
>PRK14294 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=4.8e-09 Score=102.22 Aligned_cols=87 Identities=24% Similarity=0.359 Sum_probs=73.4
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|.++.|..- .. .
T Consensus 260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dG-~ 291 (366)
T PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPTL-----------------------------------------------EG-E 291 (366)
T ss_pred eecCCCEEEEEEeCHHHHhCCCeEEEECC-----------------------------------------------CC-c
Confidence 45699999999999999999998888631 12 3
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCeeEEE
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLHTTV 265 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~~~~ 265 (345)
++|.||+|+++|++++|+|+|.+.++ ..+|||+|++++..|+.|.++..+|+..+
T Consensus 292 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~ 347 (366)
T PRK14294 292 RELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEF 347 (366)
T ss_pred EEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 58999999999999999999998544 46899999999999999999887766543
No 71
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.81 E-value=2.1e-08 Score=95.47 Aligned_cols=74 Identities=19% Similarity=0.371 Sum_probs=62.8
Q ss_pred cccCCeeEEEEecHHHHhcCcEEEE----EcCC--C-------cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEE
Q 019162 256 REGNNLHTTVTVTLVQALVGFEKTI----EHLD--E-------HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYI 322 (345)
Q Consensus 256 r~g~DL~~~~~Isl~eAl~G~~~~i----~~ld--g-------~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v 322 (345)
+.|.|+++.+.|||.||+.|+..+| ++++ | ++++|.||+++++|++++++|+|+|..++...|||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v 194 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWL 194 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEE
Confidence 4689999999999999999996544 4444 3 4688999999999999999999999765555799999
Q ss_pred EEEEECCC
Q 019162 323 TFEVLFPT 330 (345)
Q Consensus 323 ~~~v~~P~ 330 (345)
+|+|. |.
T Consensus 195 ~i~v~-ph 201 (306)
T PRK10266 195 VIHIA-PH 201 (306)
T ss_pred EEEEc-CC
Confidence 99999 64
No 72
>PRK14285 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=6.4e-09 Score=101.26 Aligned_cols=85 Identities=16% Similarity=0.333 Sum_probs=72.5
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.+++.|+..++.|||.||+.|.+++|..- ..+.
T Consensus 262 ~R~G~dL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dG~~ 294 (365)
T PRK14285 262 KRNGKDLYATLPISFTQAALGKEIKIQTI-----------------------------------------------ASKK 294 (365)
T ss_pred EEeccceEEEEecCHHHHhCCCEEEEECC-----------------------------------------------CCCE
Confidence 35689999999999999999998888641 3457
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCCC-CCceEEEEEEEcCCCCcccccCCee
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPHDRFRREGNNLH 262 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDL~v~i~~~~h~~f~r~g~DL~ 262 (345)
++|+||+|+++|++++++|+|.+.++. ..|||+|+|++..|+.|.+++..++
T Consensus 295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l 347 (365)
T PRK14285 295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLL 347 (365)
T ss_pred EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 899999999999999999999986544 4699999999999999988776443
No 73
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.76 E-value=1.1e-08 Score=100.46 Aligned_cols=87 Identities=24% Similarity=0.320 Sum_probs=71.8
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||+||+.|++++|..- .+...
T Consensus 274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl----------------------------------------------d~g~~ 307 (391)
T PRK14284 274 ERRGDDLILELPIGFVDAALGMKKEIPTL----------------------------------------------LKEGT 307 (391)
T ss_pred eeecCCEEEEEEecHHHHhCCCeEEEeec----------------------------------------------CCCcE
Confidence 45699999999999999999999888531 11356
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeE
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHT 263 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~ 263 (345)
++|+||+|+++|++++|+|+|.+.. +..+|||||+|++..++.+..+...++.
T Consensus 308 i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~ 361 (391)
T PRK14284 308 CRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLR 361 (391)
T ss_pred EEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Confidence 8999999999999999999999854 3568999999999988877776654443
No 74
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=1.4e-08 Score=99.27 Aligned_cols=87 Identities=21% Similarity=0.350 Sum_probs=74.0
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|++++|..- .. .
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dG-~ 289 (371)
T PRK10767 258 ERDGNDLYCEVPISFTTAALGGEIEVPTL-----------------------------------------------DG-R 289 (371)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEecC-----------------------------------------------CC-c
Confidence 35689999999999999999998888430 12 5
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEE
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTV 265 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~ 265 (345)
++|.||+|+++|++++++|+|.+.. ++..|||||+|+|..++.|.+++.+|+.++
T Consensus 290 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 290 VKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 8999999999999999999999854 456799999999999999999988776654
No 75
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=1.2e-08 Score=99.68 Aligned_cols=87 Identities=21% Similarity=0.326 Sum_probs=73.2
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|+++.|..- ..+
T Consensus 261 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dG~- 292 (377)
T PRK14298 261 ERVGDDIISEIPISFTQAALGADIMVPTL-----------------------------------------------YGK- 292 (377)
T ss_pred EEEcCcEEEEEEeCHHHHhCCCeEEEecC-----------------------------------------------CCC-
Confidence 35699999999999999999998888541 222
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCeeEEE
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLHTTV 265 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~~~~ 265 (345)
++|+||+|+++|++++++|+|.+..+ ...|||||++++..++.+++++.+|+.++
T Consensus 293 i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 293 VKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred EEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 78999999999999999999998543 45799999999999999999887776554
No 76
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.70 E-value=5.4e-08 Score=95.55 Aligned_cols=83 Identities=19% Similarity=0.265 Sum_probs=69.0
Q ss_pred ccCCeeEEEEecHHHHhcCcEEEEEcC-----------------------------------------------------
Q 019162 257 EGNNLHTTVTVTLVQALVGFEKTIEHL----------------------------------------------------- 283 (345)
Q Consensus 257 ~g~DL~~~~~Isl~eAl~G~~~~i~~l----------------------------------------------------- 283 (345)
.|.|+.+.+.|||.|++.|+++.|...
T Consensus 126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G 205 (386)
T PRK14289 126 RGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNG 205 (386)
T ss_pred CCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCc
Confidence 488999999999999999998766431
Q ss_pred -------------------CCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHH
Q 019162 284 -------------------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTR 339 (345)
Q Consensus 284 -------------------dg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~ 339 (345)
+.+.++|.||+++++|++++|+|+|+|...+...|||||+|+|..|+.+..+...+
T Consensus 206 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL 280 (386)
T PRK14289 206 EGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDL 280 (386)
T ss_pred cccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccce
Confidence 11357889999999999999999999965444569999999999999888766544
No 77
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.68 E-value=4.3e-08 Score=95.75 Aligned_cols=81 Identities=22% Similarity=0.343 Sum_probs=68.5
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|.++.|..- ..+.
T Consensus 261 ~R~G~Dl~~~~~Isl~~Al~G~~~~i~~l-----------------------------------------------dg~~ 293 (372)
T PRK14300 261 KVDGANLHCKLPISFVNAALGGEIEVPVI-----------------------------------------------EGGK 293 (372)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC-----------------------------------------------CCCE
Confidence 45689999999999999999998888641 2357
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCccccc
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREG 258 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g 258 (345)
++|+||+|+++|++++++|+|.+.++ ..+|||||++++..+..+.-+.
T Consensus 294 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~q 342 (372)
T PRK14300 294 VNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQ 342 (372)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence 99999999999999999999998543 5689999999999887765444
No 78
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.68 E-value=2.2e-08 Score=97.76 Aligned_cols=84 Identities=23% Similarity=0.397 Sum_probs=70.1
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|++++|..- .. .
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dg-~ 289 (371)
T PRK14287 258 ERDGDDIYCEMPLTFPQVALGDEIEVPTL-----------------------------------------------NG-K 289 (371)
T ss_pred EEecCCeEEEEeccHHHHhCCCEEEEEcC-----------------------------------------------CC-C
Confidence 45699999999999999999998888541 12 3
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCee
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLH 262 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~ 262 (345)
++|+||+|+++|++++++|+|.+.. +...|||||+|++..++.+.++...++
T Consensus 290 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14287 290 VKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELM 342 (371)
T ss_pred EEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence 7999999999999999999999854 345799999999999988877665443
No 79
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.67 E-value=3e-08 Score=96.29 Aligned_cols=83 Identities=23% Similarity=0.436 Sum_probs=69.6
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.+++.|++..+.|||+||+.|+++.|..- .. .
T Consensus 263 ~r~g~DL~~~~~isl~eAl~G~~~~i~~l-----------------------------------------------dG-~ 294 (354)
T TIGR02349 263 ERDGNDLYIEVPISFTQAILGGEIEVPTL-----------------------------------------------DG-D 294 (354)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEecC-----------------------------------------------Cc-e
Confidence 35689999999999999999998887531 12 5
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCe
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNL 261 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL 261 (345)
++|.||+|+++|++++++|+|.+..+ ..+|||||++++..++.++.+..++
T Consensus 295 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~ 346 (354)
T TIGR02349 295 VKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKEL 346 (354)
T ss_pred EEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 89999999999999999999998544 4689999999999888887766543
No 80
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.66 E-value=6.4e-08 Score=95.12 Aligned_cols=77 Identities=27% Similarity=0.380 Sum_probs=65.1
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|.++.|.. -+..
T Consensus 289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~------------------------------------------------ldg~ 320 (392)
T PRK14279 289 GRDGDDLTVTVPVSFTELALGSTLSVPT------------------------------------------------LDGP 320 (392)
T ss_pred eeecCcEEEEEEccHHHHcCCceEEEEc------------------------------------------------CCce
Confidence 3569999999999999999999888754 1223
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcc
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFR 255 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~ 255 (345)
++|+||+|+++|++++++|+|.+..++.+|||||++++.-+....
T Consensus 321 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~~v~~P~~Ls 365 (392)
T PRK14279 321 VGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNLD 365 (392)
T ss_pred EEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCC
Confidence 799999999999999999999986666789999999999665443
No 81
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.65 E-value=3.3e-08 Score=96.56 Aligned_cols=84 Identities=23% Similarity=0.392 Sum_probs=69.2
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|.+++|..- ...
T Consensus 260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl-----------------------------------------------dG~- 291 (373)
T PRK14301 260 QRQGQDLVVTQEISFVQAALGDRIEVPTL-----------------------------------------------DDP- 291 (373)
T ss_pred eeecCcEEEEEEecHHHHhCCCeEEEecC-----------------------------------------------Ccc-
Confidence 35689999999999999999998888541 223
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCee
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLH 262 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~ 262 (345)
++|.||+|+++|++++|+|+|.+..+ ..+|||||++++..++.+..+..+++
T Consensus 292 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l 344 (373)
T PRK14301 292 VTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELL 344 (373)
T ss_pred EEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 89999999999999999999998544 45899999999998887766554433
No 82
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.61 E-value=1.5e-07 Score=92.12 Aligned_cols=84 Identities=20% Similarity=0.237 Sum_probs=69.6
Q ss_pred ccCCeeEEEEecHHHHhcCcEEEEEcC--------CC-------------------------------------------
Q 019162 257 EGNNLHTTVTVTLVQALVGFEKTIEHL--------DE------------------------------------------- 285 (345)
Q Consensus 257 ~g~DL~~~~~Isl~eAl~G~~~~i~~l--------dg------------------------------------------- 285 (345)
.+.|+...+.|||.|++.|++++|... +|
T Consensus 115 kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G 194 (374)
T PRK14293 115 RGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNG 194 (374)
T ss_pred CCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCc
Confidence 588999999999999999998766331 11
Q ss_pred ---------------------cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHH
Q 019162 286 ---------------------HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRI 340 (345)
Q Consensus 286 ---------------------~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l 340 (345)
+.++|.||+++++|++++|+|+|+|...+...|||||+|+|..|+.++.++..++
T Consensus 195 ~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~ 270 (374)
T PRK14293 195 TGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINIL 270 (374)
T ss_pred ceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceE
Confidence 2567889999999999999999998655444699999999999999998776553
No 83
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.61 E-value=7.3e-08 Score=94.64 Aligned_cols=76 Identities=25% Similarity=0.357 Sum_probs=64.8
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|.+++|.. ...+.
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~I~t-----------------------------------------------ldG~~ 314 (389)
T PRK14295 282 GRSGDNLTVTVPVTFPEAALGAEVRVPT-----------------------------------------------LGGPP 314 (389)
T ss_pred EEecCCEEEEEeecHHHHhCCCeEEEEC-----------------------------------------------CCCCE
Confidence 3568999999999999999999888843 12357
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCC
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDR 253 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~ 253 (345)
++|+||+|+++|++++++|+|.+..++.+|||||++++.=...
T Consensus 315 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~~v~~P~~ 357 (389)
T PRK14295 315 VTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTVEVAVPKD 357 (389)
T ss_pred EEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEEEEECCCC
Confidence 8999999999999999999999866667899999999985443
No 84
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.59 E-value=9.3e-08 Score=93.74 Aligned_cols=74 Identities=23% Similarity=0.410 Sum_probs=63.2
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.+.|.|+++++.|||+||+.|++++|..- ..+.
T Consensus 271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dG~~ 303 (382)
T PRK14291 271 ERRGDNLYLDVNITVAEAVLGTELEVPLL-----------------------------------------------DGKK 303 (382)
T ss_pred eeecCCeEEEEEeeHHHHhCCCEEEEecC-----------------------------------------------CCCE
Confidence 35689999999999999999999888641 2346
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCC
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPH 251 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h 251 (345)
++|.||+|+++|++++|+|+|.+..+ ..+|||||++++.-.
T Consensus 304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P 345 (382)
T PRK14291 304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVP 345 (382)
T ss_pred EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeC
Confidence 89999999999999999999998543 467999999999844
No 85
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.58 E-value=1.3e-07 Score=92.38 Aligned_cols=82 Identities=18% Similarity=0.292 Sum_probs=68.9
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+.+++.|||.||+.|.+++|.. ...+.
T Consensus 254 ~R~G~DL~~~~~Isl~eAllG~~i~v~t-----------------------------------------------LdG~~ 286 (369)
T PRK14288 254 KREGCDLFIEAPVFFTTIALGHTIKVPS-----------------------------------------------LKGDE 286 (369)
T ss_pred EEeCCEEEEEEecCHHHHhcCCEEEeec-----------------------------------------------CCCCE
Confidence 4569999999999999999999888753 13456
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCCC-CCceEEEEEEEcCCCCcccccC
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPHDRFRREGN 259 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDL~v~i~~~~h~~f~r~g~ 259 (345)
++|+||+|+++|++++++|+|.+.++. ..|||||++++.-++.+..+..
T Consensus 287 l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~ 336 (369)
T PRK14288 287 LELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQ 336 (369)
T ss_pred EEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
Confidence 899999999999999999999986554 4699999999998887765543
No 86
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.53 E-value=1.9e-07 Score=91.44 Aligned_cols=77 Identities=21% Similarity=0.371 Sum_probs=64.1
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|.+++|..- .. .
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl-----------------------------------------------dg-~ 297 (380)
T PRK14276 266 ERDGSTIYYTLPISFVQAALGDTVEVPTV-----------------------------------------------HG-D 297 (380)
T ss_pred eeecceEEEEEecCHHHHhCCCeEEEEcC-----------------------------------------------CC-c
Confidence 35689999999999999999998888641 12 3
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcc
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR 255 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~ 255 (345)
++|.||+|+++|++++++|+|.+.. +..+|||||+|++.-.....
T Consensus 298 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~ 343 (380)
T PRK14276 298 VELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLN 343 (380)
T ss_pred EEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCC
Confidence 7999999999999999999999854 34679999999999555443
No 87
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.50 E-value=1.6e-07 Score=91.77 Aligned_cols=82 Identities=20% Similarity=0.317 Sum_probs=67.1
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|+++.|.. ...+.
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~i~t-----------------------------------------------ldG~~ 298 (372)
T PRK14286 266 ERQGNDLILVRKISLAQAILGAEIEVPT-----------------------------------------------IDGKK 298 (372)
T ss_pred EEecCCEEEEEEECHHHHhCCCEEEEeC-----------------------------------------------CCCCE
Confidence 3568999999999999999999887753 13456
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccC
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGN 259 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~ 259 (345)
++|+||+|+++|++++++|+|.+..+ ...|||||+|++.-+..+..+..
T Consensus 299 i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk 348 (372)
T PRK14286 299 AKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQR 348 (372)
T ss_pred EEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHH
Confidence 89999999999999999999998543 45799999999996665554443
No 88
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.48 E-value=3.4e-07 Score=89.62 Aligned_cols=77 Identities=23% Similarity=0.371 Sum_probs=63.8
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|++++|..- .. .
T Consensus 263 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dg-~ 294 (376)
T PRK14280 263 ERDGDDIYCEMPLTFAQAALGDEIEVPTL-----------------------------------------------HG-K 294 (376)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC-----------------------------------------------Cc-e
Confidence 35699999999999999999998888531 12 3
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcc
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR 255 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~ 255 (345)
++|.||+|+++|++++++|+|.+.. +...|||||++++.......
T Consensus 295 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls 340 (376)
T PRK14280 295 VKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLT 340 (376)
T ss_pred EEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCC
Confidence 7999999999999999999999853 34679999999999665444
No 89
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.48 E-value=3e-07 Score=89.97 Aligned_cols=78 Identities=22% Similarity=0.349 Sum_probs=64.4
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|+++.|.. .....
T Consensus 259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~t-----------------------------------------------ld~~~ 291 (378)
T PRK14278 259 VRDGDDLHCTVSVPMVDAALGTTVTVEA-----------------------------------------------ILDGP 291 (378)
T ss_pred EEcCCCEEEEEecCHHHHhcCCeEEEec-----------------------------------------------CCCCe
Confidence 4569999999999999999999888853 02346
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcc
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR 255 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~ 255 (345)
++|.||+|+++|++++++|+|.+.. ++..|||||++++.=...+.
T Consensus 292 i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls 337 (378)
T PRK14278 292 SEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLD 337 (378)
T ss_pred EEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCC
Confidence 8999999999999999999999853 45689999999998444333
No 90
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.47 E-value=1.5e-07 Score=92.04 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=68.1
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+...+.|||.||+.|++++|..- ...
T Consensus 258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl-----------------------------------------------dG~- 289 (371)
T PRK14292 258 RREQEHLIYEARIGFAKAALGGQITVPTL-----------------------------------------------DGP- 289 (371)
T ss_pred ccchhceeEEeccCHHHHhCCCeEEEECC-----------------------------------------------CCC-
Confidence 35689999999999999999999888631 112
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCe
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNL 261 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL 261 (345)
.+|.||+|+++|++++++|+|.+.. +..+|||||++++..++.+..+...|
T Consensus 290 ~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l 341 (371)
T PRK14292 290 QVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREA 341 (371)
T ss_pred EEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 3699999999999999999999854 45689999999999998777655433
No 91
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.46 E-value=3.7e-07 Score=89.94 Aligned_cols=77 Identities=25% Similarity=0.340 Sum_probs=63.3
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|.+++|..- .. .
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dg-~ 313 (397)
T PRK14281 282 VRNGDDVIYNLAVSYPDLVLGTKVEVPTL-----------------------------------------------DG-A 313 (397)
T ss_pred EEecCCEEEEEEecHHHHhcCCeEEeecC-----------------------------------------------Cc-c
Confidence 35689999999999999999998888641 12 3
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcc
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR 255 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~ 255 (345)
++|.||+|+++|++++++|+|.+.. ++..|||||+++|.-.....
T Consensus 314 i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls 359 (397)
T PRK14281 314 VKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVS 359 (397)
T ss_pred EEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCC
Confidence 7899999999999999999999853 34679999999998544433
No 92
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.43 E-value=1.1e-06 Score=86.19 Aligned_cols=78 Identities=23% Similarity=0.328 Sum_probs=64.7
Q ss_pred cccCCeeEEEEecHHHHhcCcEEEEEcC----------------------------------------------------
Q 019162 256 REGNNLHTTVTVTLVQALVGFEKTIEHL---------------------------------------------------- 283 (345)
Q Consensus 256 r~g~DL~~~~~Isl~eAl~G~~~~i~~l---------------------------------------------------- 283 (345)
+.|.|+..++.|||.|++.|++++|...
T Consensus 117 ~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~ 196 (378)
T PRK14283 117 QRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQ 196 (378)
T ss_pred cCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCC
Confidence 3589999999999999999998766331
Q ss_pred --------------------CCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCC
Q 019162 284 --------------------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLT 333 (345)
Q Consensus 284 --------------------dg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~ 333 (345)
+.+.++|.||+++++|++++++|+|+|.......|||||+|+|..+..+.
T Consensus 197 G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~ 266 (378)
T PRK14283 197 GEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFR 266 (378)
T ss_pred ccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEE
Confidence 11467788999999999999999999976555579999999999887643
No 93
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.42 E-value=1.1e-06 Score=86.23 Aligned_cols=77 Identities=23% Similarity=0.362 Sum_probs=64.3
Q ss_pred cccCCeeEEEEecHHHHhcCcEEEEEcC----------------------------------------------------
Q 019162 256 REGNNLHTTVTVTLVQALVGFEKTIEHL---------------------------------------------------- 283 (345)
Q Consensus 256 r~g~DL~~~~~Isl~eAl~G~~~~i~~l---------------------------------------------------- 283 (345)
+.|.|+.+.+.|||.||+.|++++|...
T Consensus 119 ~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~ 198 (380)
T PRK14297 119 QRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCG 198 (380)
T ss_pred CCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCC
Confidence 3589999999999999999998776431
Q ss_pred --------------------CCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCC
Q 019162 284 --------------------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTL 332 (345)
Q Consensus 284 --------------------dg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l 332 (345)
..++++|.||+++++|++++++|+|++.......|||||+|+|..++.+
T Consensus 199 G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f 267 (380)
T PRK14297 199 GSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTF 267 (380)
T ss_pred CCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCE
Confidence 1146788899999999999999999986554446999999999988765
No 94
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.37 E-value=4.1e-07 Score=87.43 Aligned_cols=81 Identities=27% Similarity=0.460 Sum_probs=67.2
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.+.+.|+..++.|+|.+|+.|.+..|..- ...
T Consensus 260 ~R~g~dL~~~~~Is~~~AalG~~i~vptl-----------------------------------------------~g~- 291 (371)
T COG0484 260 ERDGDDLYCEVPISFTEAALGGEIEVPTL-----------------------------------------------DGR- 291 (371)
T ss_pred EECCCceEeccccCHHHHhcCCEEEEEec-----------------------------------------------CCC-
Confidence 35689999999999999999988888641 223
Q ss_pred EEEEecCCCCCCcEEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccC
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGN 259 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~ 259 (345)
++|+||||++.|++++++|+|.+. .+...|||||+|+|.-...+.....
T Consensus 292 ~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~ 341 (371)
T COG0484 292 VKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQK 341 (371)
T ss_pred EEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHH
Confidence 999999999999999999999994 5566799999999997776554433
No 95
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.36 E-value=1.7e-06 Score=84.93 Aligned_cols=76 Identities=24% Similarity=0.333 Sum_probs=62.5
Q ss_pred cccCCeeEEEEecHHHHhcCcEEEEEcC--------C-------------------------------------------
Q 019162 256 REGNNLHTTVTVTLVQALVGFEKTIEHL--------D------------------------------------------- 284 (345)
Q Consensus 256 r~g~DL~~~~~Isl~eAl~G~~~~i~~l--------d------------------------------------------- 284 (345)
+.|.|+.+.+.|||.|++.|++++|... +
T Consensus 126 ~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~ 205 (386)
T PRK14277 126 QKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCH 205 (386)
T ss_pred CCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCC
Confidence 3589999999999999999998876441 1
Q ss_pred ---------------------CcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCC
Q 019162 285 ---------------------EHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTT 331 (345)
Q Consensus 285 ---------------------g~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ 331 (345)
.+.++|.||+++++|++++++|+|+|...+...|||||+|+|.-...
T Consensus 206 G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~ 273 (386)
T PRK14277 206 GEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPL 273 (386)
T ss_pred cceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCC
Confidence 13578889999999999999999999654445699999999986544
No 96
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.33 E-value=2.1e-06 Score=83.86 Aligned_cols=77 Identities=18% Similarity=0.280 Sum_probs=63.2
Q ss_pred cccCCeeEEEEecHHHHhcCcEEEEEcC----------------------------------------------------
Q 019162 256 REGNNLHTTVTVTLVQALVGFEKTIEHL---------------------------------------------------- 283 (345)
Q Consensus 256 r~g~DL~~~~~Isl~eAl~G~~~~i~~l---------------------------------------------------- 283 (345)
+.|.|+.+.+.|||.||+.|++++|...
T Consensus 120 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~ 199 (372)
T PRK14296 120 TKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCN 199 (372)
T ss_pred CCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcC
Confidence 4589999999999999999998776431
Q ss_pred -------------C-------CcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCC
Q 019162 284 -------------D-------EHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTL 332 (345)
Q Consensus 284 -------------d-------g~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l 332 (345)
+ .+.++|.||+++++|++++++|+|.+...+...|||||+|+|.-...+
T Consensus 200 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F 268 (372)
T PRK14296 200 GAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVF 268 (372)
T ss_pred CcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCE
Confidence 0 146788899999999999999999987544456999999999865544
No 97
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=4.8e-07 Score=94.76 Aligned_cols=54 Identities=43% Similarity=0.621 Sum_probs=45.8
Q ss_pred CcccccccCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcc
Q 019162 24 GKSYYEVLQVPRGA----SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80 (345)
Q Consensus 24 ~~~~y~iLgv~~~a----s~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d 80 (345)
--+-|+||.|+-+- ..++||++|++||.+||||+||. -.++|..+|+|||.|+.
T Consensus 1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE---GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE---GREMFERVNKAYELLSS 1337 (2235)
T ss_pred hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch---HHHHHHHHHHHHHHHHH
Confidence 34679999997633 34889999999999999999984 45899999999999983
No 98
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=6.4e-07 Score=79.59 Aligned_cols=55 Identities=29% Similarity=0.620 Sum_probs=48.9
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHH-Hhcc
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYE-VLSD 80 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~-~L~d 80 (345)
+.||.+|||..+|+.++++.||..|++++|||...+. ...+.|.+|.+||. ||+.
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~-adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEE-ADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc-ccHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999998743 34578999999999 7764
No 99
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.27 E-value=1.5e-06 Score=86.11 Aligned_cols=74 Identities=18% Similarity=0.249 Sum_probs=62.3
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.+.|.|+.+++.|||.||+.|.++.|.. ...+.
T Consensus 270 ~R~G~DL~~~~~Isl~eAllG~~i~I~t-----------------------------------------------LdG~~ 302 (421)
T PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITH-----------------------------------------------LDGRK 302 (421)
T ss_pred EEeCCeEEEEEeCCHHHHhcCCEEEeeC-----------------------------------------------CCCCe
Confidence 4569999999999999999999887753 13456
Q ss_pred EEEEecCC--CCCCcEEEEeecCCCCCC--CCCceEEEEEEEcCC
Q 019162 211 VTVDIEKG--MQDGQEVVFYEDGEPKID--GEPGDLKFRIRTAPH 251 (345)
Q Consensus 211 ~~V~Ip~G--~~~G~~i~~~g~G~~~~~--~~~GDL~v~i~~~~h 251 (345)
++|+||+| +++|++++|+|+|.+..+ +..|||||+++|.=.
T Consensus 303 l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P 347 (421)
T PTZ00037 303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFP 347 (421)
T ss_pred EEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcC
Confidence 89999999 999999999999998433 357999999999844
No 100
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=1.9e-06 Score=67.59 Aligned_cols=50 Identities=28% Similarity=0.424 Sum_probs=43.7
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccc
Q 019162 28 YEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81 (345)
Q Consensus 28 y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~ 81 (345)
-.||||+++++.+.||+|+|++....|||+.. +| -.-.+||||+++|...
T Consensus 59 ~lIL~v~~s~~k~KikeaHrriM~~NHPD~GG-SP---YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 59 ALILGVTPSLDKDKIKEAHRRIMLANHPDRGG-SP---YLASKINEAKDLLEGT 108 (112)
T ss_pred HHHhCCCccccHHHHHHHHHHHHHcCCCcCCC-CH---HHHHHHHHHHHHHhcc
Confidence 35899999999999999999999999999997 66 3445799999999754
No 101
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.20 E-value=2.4e-06 Score=87.98 Aligned_cols=70 Identities=51% Similarity=0.920 Sum_probs=66.1
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 95 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 95 (345)
+|||+||||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.||..+.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 699999999999999999999999999999999984 7788999999999999999999999999997654
No 102
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=97.31 E-value=0.00024 Score=62.34 Aligned_cols=46 Identities=20% Similarity=0.382 Sum_probs=39.7
Q ss_pred CCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEe
Q 019162 171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFY 228 (345)
Q Consensus 171 ~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~ 228 (345)
.|+|+|.+... .++|+.|+|.|.+..++++.+.+ .|+.+|++|++.
T Consensus 104 ~C~G~G~~i~~-----------~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 104 RCRGTGLIQRR-----------QRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CCCCeeEEecC-----------CCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence 68999985421 25799999999999999999999 999999999874
No 103
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.10 E-value=0.00036 Score=58.69 Aligned_cols=69 Identities=23% Similarity=0.468 Sum_probs=55.1
Q ss_pred hccCCcccccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCc-----HHHHHHHHHHHHHHHHhcccccccccc
Q 019162 20 NVIAGKSYYEVLQVPR--GASDEQIKRAYRKLALKYHPDKNQGN-----EEANKRFAEINNAYEVLSDSETRNIYD 88 (345)
Q Consensus 20 ~~~~~~~~y~iLgv~~--~as~~eIk~ayr~la~~~hPd~~~~~-----~~a~~~f~~i~~Ay~~L~d~~~r~~yd 88 (345)
++...++||.++|... ...+..+..-|.-..++.|||+.... ..|.+...++|+||.+|.||-+|+.|=
T Consensus 3 ~~~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yi 78 (168)
T KOG3192|consen 3 KMGSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYL 78 (168)
T ss_pred ccchHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3455679999997544 55677777789999999999995311 247788999999999999999999985
No 104
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.63 E-value=0.0041 Score=59.44 Aligned_cols=75 Identities=17% Similarity=0.235 Sum_probs=60.8
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++++|+...++++|.|+..|..+.+.. ...+.
T Consensus 248 ~Rrg~dL~~~~~i~l~eal~G~~~~~~~-----------------------------------------------ldGr~ 280 (337)
T KOG0712|consen 248 DRRGSDLYRKLTISLVEALCGFQRVWET-----------------------------------------------LDGRL 280 (337)
T ss_pred eecccccceeeecchhhccccceEEEEc-----------------------------------------------cCCce
Confidence 3568888888888888888886665541 14567
Q ss_pred EEEEecCC--CCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCC
Q 019162 211 VTVDIEKG--MQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHD 252 (345)
Q Consensus 211 ~~V~Ip~G--~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~ 252 (345)
+++.++|| +.+|++.+++|+|.+..+...|||||.++|+=.+
T Consensus 281 l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 281 LKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYIKFEVKFPK 324 (337)
T ss_pred EEEecCCCceeChhHEEeecCCCcccccCCCCcEEEEEEEEcCC
Confidence 89999999 9999999999999996555599999999998444
No 105
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.19 E-value=0.003 Score=55.19 Aligned_cols=54 Identities=41% Similarity=0.609 Sum_probs=46.8
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--Cc-----HHHHHHHHHHHHHHHHh
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQ--GN-----EEANKRFAEINNAYEVL 78 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~--~~-----~~a~~~f~~i~~Ay~~L 78 (345)
.+.|.+|++...++..+|+++|+++...+|||+-. +. ..+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999999999842 12 24788999999999853
No 106
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=96.09 E-value=0.0067 Score=44.22 Aligned_cols=36 Identities=28% Similarity=0.463 Sum_probs=22.0
Q ss_pred cCCCccceEEEEEecCceEEEEeecccccccCceEEE
Q 019162 170 RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYER 206 (345)
Q Consensus 170 ~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~ 206 (345)
+.|+|+|.+...+..++++.+ ....|+.|+|.|.+.
T Consensus 19 ~~C~G~G~~~~~~~~~~~~~~-~~~~C~~C~G~G~~i 54 (66)
T PF00684_consen 19 PQCNGSGQVTRRQQTPGGVFQ-MQQTCPKCGGTGKII 54 (66)
T ss_dssp TTSSSSSEEEEEEESSSTTEE-EEEE-TTTSSSSEE-
T ss_pred cCCCCeeEEEEEEeCCCeEEE-EEEECCCCcceeeEE
Confidence 479999996555444333322 244699999988764
No 107
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.84 E-value=0.0038 Score=54.60 Aligned_cols=64 Identities=33% Similarity=0.481 Sum_probs=50.6
Q ss_pred ccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcHH-----HHHHHHHHHHHHHHhccccccccccc
Q 019162 26 SYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEE-----ANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 26 ~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
+|+..+|..+.+ ..+.++..|+.+.+.+|||+.....+ +.+.+..++.||.+|.+|-+|..|=.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l 72 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL 72 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 456666666644 45678899999999999999864432 45688999999999999999998853
No 108
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=94.59 E-value=0.063 Score=53.85 Aligned_cols=49 Identities=35% Similarity=0.491 Sum_probs=35.3
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---HH----HHHHHHHHHHHHHH
Q 019162 29 EVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN---EE----ANKRFAEINNAYEV 77 (345)
Q Consensus 29 ~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~---~~----a~~~f~~i~~Ay~~ 77 (345)
+=..+..=.+.+++||||||..+..||||-+.. .+ |++.|..+++||..
T Consensus 392 qpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~ 447 (453)
T KOG0431|consen 392 QPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK 447 (453)
T ss_pred ccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 334555566999999999999999999997644 23 55556666666653
No 109
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=94.40 E-value=0.081 Score=43.71 Aligned_cols=53 Identities=23% Similarity=0.246 Sum_probs=38.9
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccc
Q 019162 26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82 (345)
Q Consensus 26 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~ 82 (345)
.-..||+|++..+.++|.+.|.+|....+|++.+ +. -.-.+|..|.|.|..+-
T Consensus 59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGG-Sf---YLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGG-SF---YLQSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS--H---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCC-CH---HHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999886 33 44557888998887544
No 110
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=94.39 E-value=0.093 Score=42.29 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=22.7
Q ss_pred eeeeC-CCCC-----cCCCccceEEEEEecCceEEEEeecccccccCce
Q 019162 161 NVIKP-APGK-----RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVK 203 (345)
Q Consensus 161 ~~~c~-c~g~-----~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g 203 (345)
.+.|. |.|+ +.|+|+|.+...+ ++ ++ .....|+.|+|.|
T Consensus 41 ~v~C~~C~GsG~~~C~~C~G~G~v~~~~-~g-~~--q~~~~C~~C~G~G 85 (111)
T PLN03165 41 TQPCFPCSGTGAQVCRFCVGSGNVTVEL-GG-GE--KEVSKCINCDGAG 85 (111)
T ss_pred CCCCCCCCCCCCcCCCCCcCcCeEEEEe-CC-cE--EEEEECCCCCCcc
Confidence 35676 7665 5788999865443 33 22 2344566666665
No 111
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=86.40 E-value=1.5 Score=39.00 Aligned_cols=38 Identities=34% Similarity=0.487 Sum_probs=29.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhc
Q 019162 34 PRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLS 79 (345)
Q Consensus 34 ~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~ 79 (345)
+++||.+||++|+.++..+|- +|+ +.-.+|-.||+.+.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~-----gd~---~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYA-----GDE---KSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhc-----CCH---HHHHHHHHHHHHHH
Confidence 579999999999999999982 233 34556889999654
No 112
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=85.99 E-value=0.64 Score=33.70 Aligned_cols=21 Identities=14% Similarity=0.634 Sum_probs=15.0
Q ss_pred CCCccceEEEEEecCceEEEEeecccccccCce
Q 019162 171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVK 203 (345)
Q Consensus 171 ~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g 203 (345)
.|+|+|.++ .+++|+.|+|.|
T Consensus 46 ~C~G~G~~i------------~~~~C~~C~G~g 66 (66)
T PF00684_consen 46 KCGGTGKII------------EKDPCKTCKGSG 66 (66)
T ss_dssp TTSSSSEE-------------TSSB-SSSTTSS
T ss_pred CCcceeeEE------------CCCCCCCCCCcC
Confidence 688888743 267899999975
No 113
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=81.79 E-value=1.4 Score=42.30 Aligned_cols=55 Identities=35% Similarity=0.567 Sum_probs=43.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC----cHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162 36 GASDEQIKRAYRKLALKYHPDKNQG----NEEANKRFAEINNAYEVLSDSETRNIYDTY 90 (345)
Q Consensus 36 ~as~~eIk~ayr~la~~~hPd~~~~----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 90 (345)
-++..+|+.+|+..+...||++... ....++.|++|.+||++|++..+|..+|..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 3678899999999999999998741 223557799999999999987666666653
No 114
>PF13446 RPT: A repeated domain in UCH-protein
Probab=80.17 E-value=3.7 Score=29.16 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=23.8
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHH
Q 019162 26 SYYEVLQVPRGASDEQIKRAYRKLAL 51 (345)
Q Consensus 26 ~~y~iLgv~~~as~~eIk~ayr~la~ 51 (345)
+-|+.|||+++++.+.|-.+|+....
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 45999999999999999999998876
No 115
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=78.41 E-value=1.3 Score=45.36 Aligned_cols=9 Identities=11% Similarity=0.117 Sum_probs=5.9
Q ss_pred cCCCccceE
Q 019162 170 RRCNCRNEV 178 (345)
Q Consensus 170 ~~C~G~G~~ 178 (345)
+.|+|+|..
T Consensus 22 ~vc~gtG~~ 30 (715)
T COG1107 22 PVCHGTGFS 30 (715)
T ss_pred ccccccccc
Confidence 467777764
No 116
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=76.13 E-value=6.6 Score=31.70 Aligned_cols=46 Identities=22% Similarity=0.338 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcHH----HHHHHHHHHHHHHHhcc
Q 019162 35 RGASDEQIKRAYRKLALKYHPDKNQGNEE----ANKRFAEINNAYEVLSD 80 (345)
Q Consensus 35 ~~as~~eIk~ayr~la~~~hPd~~~~~~~----a~~~f~~i~~Ay~~L~d 80 (345)
+..+..+++.|.|.+-++.|||.....|+ .++-++.++.-.+.|..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 45677899999999999999998765554 34556777766666654
No 117
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=73.36 E-value=15 Score=27.22 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=29.6
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQ 59 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~ 59 (345)
++++.-+++++++-|+..||+.|-++..+|..=-..|
T Consensus 1 MCRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~P 37 (88)
T COG5552 1 MCRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHP 37 (88)
T ss_pred CccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCc
Confidence 3567778899999999999999998888876544444
No 118
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=71.24 E-value=9.4 Score=31.58 Aligned_cols=59 Identities=12% Similarity=0.017 Sum_probs=36.8
Q ss_pred eccceEEEEEEeeeeeC-CCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEE
Q 019162 149 YMGGSLKVWREKNVIKP-APGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF 227 (345)
Q Consensus 149 ~~G~~~~v~~~r~~~c~-c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~ 227 (345)
+.|....+...|+..|. |.....|.-... +.....+...+++.-+.+++.||.+.+
T Consensus 4 v~~~~~~V~~~r~saC~~C~~~~~Cg~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~GD~V~v 60 (135)
T PF04246_consen 4 VEGGIAWVEVQRSSACGSCSASGGCGTGLL-----------------------AKLFSGKPITFRAPNPIGAKVGDRVEV 60 (135)
T ss_pred EeCCEEEEEEccCCcCcccCCCCCCCcchh-----------------------hhhcCCCcEEEEecCCCCCCCCCEEEE
Confidence 45667788888888887 654334431000 011122457788888899999999988
Q ss_pred eec
Q 019162 228 YED 230 (345)
Q Consensus 228 ~g~ 230 (345)
.-.
T Consensus 61 ~i~ 63 (135)
T PF04246_consen 61 EIP 63 (135)
T ss_pred Eec
Confidence 653
No 119
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=69.00 E-value=24 Score=26.33 Aligned_cols=57 Identities=21% Similarity=0.200 Sum_probs=38.8
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHH----HHHHHHHHHhcc
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRF----AEINNAYEVLSD 80 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f----~~i~~Ay~~L~d 80 (345)
|++|--.+.|+.+.|+.+||+.|-.+..+|..=-..| +....+.| .+|..|-.-|.|
T Consensus 1 MCRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~P-s~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 1 MCRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKP-SAANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCc-chhhHHHHHHHHHHHHHHHHHHHH
Confidence 3556667778999999999999999999988665555 22223334 355555555544
No 120
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=63.18 E-value=6.1 Score=37.55 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=21.7
Q ss_pred CCCccceE-EEEEecCceEEEEeecccccccCceEEEecEEEEEE
Q 019162 171 RCNCRNEV-YHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVD 214 (345)
Q Consensus 171 ~C~G~G~~-~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~ 214 (345)
.|+|+|.. .....|.| ..+|.+|.|.|-......+.|.
T Consensus 239 ~C~G~G~~~C~tC~grG------~k~C~TC~gtgsll~~t~~vV~ 277 (406)
T KOG2813|consen 239 MCHGRGIKECHTCKGRG------KKPCTTCSGTGSLLNYTRIVVY 277 (406)
T ss_pred hccCCCcccCCcccCCC------CcccccccCccceeeeEEEEEE
Confidence 46666652 23333333 4678888888776655544443
No 121
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=58.30 E-value=6.2 Score=19.53 Aligned_cols=13 Identities=54% Similarity=0.951 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHhc
Q 019162 67 RFAEINNAYEVLS 79 (345)
Q Consensus 67 ~f~~i~~Ay~~L~ 79 (345)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4778889998874
No 122
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=56.40 E-value=7.2 Score=31.45 Aligned_cols=12 Identities=25% Similarity=0.468 Sum_probs=7.4
Q ss_pred ccccccCceEEE
Q 019162 195 VCDQCQNVKYER 206 (345)
Q Consensus 195 ~C~~C~G~g~~~ 206 (345)
.|++|+|.|.+.
T Consensus 54 ~C~~C~G~G~v~ 65 (111)
T PLN03165 54 VCRFCVGSGNVT 65 (111)
T ss_pred CCCCCcCcCeEE
Confidence 466666666554
No 123
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=47.02 E-value=23 Score=24.57 Aligned_cols=24 Identities=33% Similarity=0.630 Sum_probs=19.3
Q ss_pred CCcEEEEEEEECCCC--CCHHHHHHH
Q 019162 317 KGDLYITFEVLFPTT--LTEDQKTRI 340 (345)
Q Consensus 317 ~GDL~v~~~v~~P~~--l~~~q~~~l 340 (345)
.||+.|-|+|.+|+- +|.+..+.+
T Consensus 27 ~gDiTv~f~v~LPEiFtls~~eYea~ 52 (54)
T PF12991_consen 27 NGDITVAFRVELPEIFTLSEAEYEAI 52 (54)
T ss_pred CCCEEEEEEecCCeeEEechhHhHHh
Confidence 599999999999994 666666554
No 124
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=46.97 E-value=46 Score=28.33 Aligned_cols=21 Identities=19% Similarity=0.121 Sum_probs=15.5
Q ss_pred cEEEEEEecCCCCCCcEEEEe
Q 019162 208 GYFVTVDIEKGMQDGQEVVFY 228 (345)
Q Consensus 208 ~~~~~V~Ip~G~~~G~~i~~~ 228 (345)
...++|.-+.+++.||.+.+.
T Consensus 48 ~~~~~v~~~~~~~vGD~V~v~ 68 (154)
T PRK10862 48 THQLVVPSSQPLVPGQKVELG 68 (154)
T ss_pred ceEEEecCCCCCCCCCEEEEe
Confidence 455777777778888888764
No 125
>CHL00185 ycf59 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional
Probab=41.94 E-value=53 Score=31.56 Aligned_cols=74 Identities=15% Similarity=0.181 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhhc--cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHHHHhcc
Q 019162 7 RLLFLLCALCYALNV--IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDK-NQGNEEANKRFAEINNAYEVLSD 80 (345)
Q Consensus 7 ~~~~~~~~~~~~~~~--~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~-~~~~~~a~~~f~~i~~Ay~~L~d 80 (345)
-.-||+++++.+.-. ....++|+.|||++..-..++-+.-...+.+.-|-. +-++|.-......+.++++.|..
T Consensus 230 W~RFFLlsVfaTmyl~d~~R~~Fy~alGld~~~yD~~Vi~~Tn~~a~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~~ 306 (351)
T CHL00185 230 WCRFFLLSVFATMYLNDLQRSDFYAAIGLDARQFDMHVIRKTNESAARLFPVVLDVDNPKFFKYLDQCACANLKLIE 306 (351)
T ss_pred HHHHHHHHHHHHheehhcchHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCCHHHHHHHHHHHHHHHHHHH
Confidence 334666666665443 556799999999998766666666677777777754 45577766777777777777754
No 126
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=40.60 E-value=15 Score=37.79 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=18.2
Q ss_pred cCCCccceEEEEEecCceEEEEeecccccccCceE
Q 019162 170 RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKY 204 (345)
Q Consensus 170 ~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~ 204 (345)
+.|+|+|.+..=..+--.+.+...-.|+.|+-+..
T Consensus 72 ~~c~G~gkv~~c~~cG~~~~~~~~~lc~~c~~~~~ 106 (715)
T COG1107 72 PECGGTGKVLTCDICGDIIVPWEEGLCPECRRKPK 106 (715)
T ss_pred ccCCCceeEEeeccccceecCcccccChhHhhCCc
Confidence 35777777433222222222233336999987643
No 127
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.55 E-value=51 Score=27.06 Aligned_cols=50 Identities=20% Similarity=0.210 Sum_probs=37.7
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccc
Q 019162 28 YEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81 (345)
Q Consensus 28 y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~ 81 (345)
-.||+|+..-+.++|-+.|..|-....+.+.+.- ..-.+|..|-|-|..+
T Consensus 62 ~qILnV~~~ln~eei~k~yehLFevNdkskGGSF----YLQSKVfRAkErld~E 111 (132)
T KOG3442|consen 62 QQILNVKEPLNREEIEKRYEHLFEVNDKSKGGSF----YLQSKVFRAKERLDEE 111 (132)
T ss_pred hhHhCCCCCCCHHHHHHHHHHHHhccCcccCcce----eehHHHHHHHHHHHHH
Confidence 5799999999999999999999999988887632 2223455566655443
No 128
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=39.43 E-value=10 Score=34.73 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=12.2
Q ss_pred cccccccCceEEEecE
Q 019162 194 QVCDQCQNVKYEREGY 209 (345)
Q Consensus 194 ~~C~~C~G~g~~~~~~ 209 (345)
-.|++|+|.|.+.++.
T Consensus 39 vtCPTCqGtGrIP~eq 54 (238)
T PF07092_consen 39 VTCPTCQGTGRIPREQ 54 (238)
T ss_pred CcCCCCcCCccCCccc
Confidence 3699999999876653
No 129
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=37.81 E-value=1.1e+02 Score=26.33 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=59.7
Q ss_pred CeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCC
Q 019162 260 NLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTT 331 (345)
Q Consensus 260 DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ 331 (345)
++...+.++..+++.+....+.-.........++.+...+..+++.+++.... ...++.+.++.+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 219 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR--GALGKARLKELSKRHPP 219 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC--CCcccceeeeeccCCCC
Confidence 78899999999999999998888887655678999999999999999998766 34699999998886553
No 130
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.
Probab=36.97 E-value=1e+02 Score=29.62 Aligned_cols=61 Identities=23% Similarity=0.202 Sum_probs=41.9
Q ss_pred cCCcccccccCCCC-CCCHHHHHHHHHHHHHH-------hCCCCCCC---cHHHHHHHHHHHHHHHHhcccc
Q 019162 22 IAGKSYYEVLQVPR-GASDEQIKRAYRKLALK-------YHPDKNQG---NEEANKRFAEINNAYEVLSDSE 82 (345)
Q Consensus 22 ~~~~~~y~iLgv~~-~as~~eIk~ayr~la~~-------~hPd~~~~---~~~a~~~f~~i~~Ay~~L~d~~ 82 (345)
....++++.||++. ..|.+|+.+-.+.++.+ .++|.+.. ...-.+.|+++.+||+.|++.-
T Consensus 79 Y~R~pl~~~l~l~~~~~~~~eL~~l~~~li~~~N~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~y~~l~~~~ 150 (318)
T PF12725_consen 79 YYRPPLSERLGLETEEYSTEELKELTEYLIEKANELREQITEDDNGVVDIPYDKEEIFEEAREGYENLAERY 150 (318)
T ss_pred cCCcCHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHHHHHHHHhC
Confidence 44567788899998 88999998877766543 33333310 0123688999999999998643
No 131
>PRK14051 negative regulator GrlR; Provisional
Probab=36.92 E-value=1.9e+02 Score=23.20 Aligned_cols=71 Identities=8% Similarity=0.002 Sum_probs=45.4
Q ss_pred CceEEEEEEEcCCCCcccccCCeeEEEEec--HHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCC
Q 019162 239 PGDLKFRIRTAPHDRFRREGNNLHTTVTVT--LVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL 311 (345)
Q Consensus 239 ~GDL~v~i~~~~h~~f~r~g~DL~~~~~Is--l~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~ 311 (345)
.-||+++++-..|+.-..-+.+-.+.+.|+ +.+.-.|+++.=..-+...+.|.+.. +==..+.|++-|||.
T Consensus 47 d~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~Nekl~vdv~a--kFI~~LvI~~~~~~~ 119 (123)
T PRK14051 47 DEDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYA--KFIEPLVIKNTGMPQ 119 (123)
T ss_pred cceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCCcEEEEEEee--eeeeeeEEccCCCcc
Confidence 478899999888887777676667777777 44444444443333344455555432 222357799999984
No 132
>cd01047 ACSF Aerobic Cyclase System Fe-containing subunit (ACSF), ferritin-like diiron-binding domain. Aerobic Cyclase System, Fe-containing subunit (ACSF) is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrivivax gelatinosus acsF codes for a conserved, putative binuclear iron-cluster-containing protein involved in aerobic oxidative cyclization of Mg-protoporphyrin IX monomethyl ester. AcsF and homologs have a leucine zipper and two copies of the conserved glutamate and histidine residues predicted to act as ligands for iron in the Ex(29-35)DExRH motifs. Several homologs of AcsF are found in a wide range of photosynthetic organisms, including Chlamydomonas reinhardtii Crd1 and Pharbitis nil PNZIP, suggesting that this aerobic oxidative cyclization mechanism is conserved from bacteria to plants.
Probab=35.85 E-value=99 Score=29.40 Aligned_cols=73 Identities=16% Similarity=0.251 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhhhc--cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHHHHhcc
Q 019162 8 LLFLLCALCYALNV--IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDK-NQGNEEANKRFAEINNAYEVLSD 80 (345)
Q Consensus 8 ~~~~~~~~~~~~~~--~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~-~~~~~~a~~~f~~i~~Ay~~L~d 80 (345)
.-||++++..+.-. ....++|+.|||++..-..++-+.-...+.+.-|-. +-++|.-......+.++.+.|..
T Consensus 215 ~RFFLlsVfaTmyl~d~~R~~Fy~alGld~~~yD~~Vi~~Tn~~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~~ 290 (323)
T cd01047 215 IRFFLLSVYATMYLNDHQRPDFYEALGLDTTEFDMHVIRETNETAARVFPAVLDVDNPEFRRGLDRLVDLNLKLEA 290 (323)
T ss_pred HHHHHHHHHHhheeeccchHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCChHHHHHHHHHHHHHHHHHH
Confidence 34666666665443 455799999999998766666666677777777754 44567655566666666666643
No 133
>TIGR02029 AcsF magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase. This model respresents the oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under aerobic conditions. This enzyme is believed to utilize a binuclear iron center and molecular oxygen. There are two isoforms of this enzyme in some plants and cyanobacterai which are differentially regulated based on the levels of copper and oxygen. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under aerobic conditions (a separate enzyme, BchE, acts under anaerobic conditions). This enzyme is found in plants, cyanobacteria and other photosynthetic bacteria.
Probab=35.72 E-value=81 Score=30.16 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhh--ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHHHHhcc
Q 019162 8 LLFLLCALCYALN--VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDK-NQGNEEANKRFAEINNAYEVLSD 80 (345)
Q Consensus 8 ~~~~~~~~~~~~~--~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~-~~~~~~a~~~f~~i~~Ay~~L~d 80 (345)
.-||+++++.+.- .....++|+.|||++..-..++-+.-...+.+.-|-. +-++|.-......+.++...|..
T Consensus 225 ~RFFLLsVfaTmyl~d~~R~~Fy~alGld~~~yD~~Vi~~Tne~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~~ 300 (337)
T TIGR02029 225 SRFFLLSVYSTMYLRDHQRPGFYEALGLDATDFDLQVFRNTNETSGRIFPMTLNTEHPRFRRLLDRMAGYSEKISA 300 (337)
T ss_pred HHHHHHHHHHHHhhhhcccHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCCHHHHHHHHHHHHHHHHHHH
Confidence 3466666666543 3556799999999997766666666667777777754 45567655666666666666653
No 134
>PRK13654 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional
Probab=34.92 E-value=76 Score=30.60 Aligned_cols=74 Identities=16% Similarity=0.239 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHhhhc--cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHHHHhcc
Q 019162 7 RLLFLLCALCYALNV--IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDK-NQGNEEANKRFAEINNAYEVLSD 80 (345)
Q Consensus 7 ~~~~~~~~~~~~~~~--~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~-~~~~~~a~~~f~~i~~Ay~~L~d 80 (345)
-.-||+++++.+.-. ....++|+.|||++..-..++-+.-...+.+.-|-. +-++|.-......+.++.+.|..
T Consensus 234 W~RFFLlsVfaTmyl~d~~R~~Fy~alGlD~~~yD~~Vi~~Tne~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~~ 310 (355)
T PRK13654 234 WIRFFLLAVFATMYLRDHERPDFYEALGLDAREYDQEVIRKTNETSARVFPVVLDVDDPRFYARLERCVENNEKLRA 310 (355)
T ss_pred HHHHHHHHHHhheeeecccchHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCChHHHHHHHHHHHHHHHHHH
Confidence 344667777665443 556799999999998777777667777777877754 44567655666666666666653
No 135
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=34.59 E-value=50 Score=23.50 Aligned_cols=21 Identities=19% Similarity=0.418 Sum_probs=17.8
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q 019162 323 TFEVLFPTTLTEDQKTRIKEV 343 (345)
Q Consensus 323 ~~~v~~P~~l~~~q~~~l~~~ 343 (345)
.....||.+||+++|..+-.+
T Consensus 17 ~~eL~Fp~~ls~~eRriih~l 37 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLL 37 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHH
Confidence 567899999999999987654
No 136
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=33.44 E-value=1e+02 Score=21.09 Aligned_cols=34 Identities=12% Similarity=0.046 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCC
Q 019162 275 GFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEG 308 (345)
Q Consensus 275 G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G 308 (345)
+-...|-|.||..+.|+.++..+-|+.+.+.-.-
T Consensus 5 ~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~ 38 (56)
T PF12791_consen 5 KKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKD 38 (56)
T ss_pred CCEEEEEcCCCcEEEEeCCCCCcccCEEEEechh
Confidence 5667889999999999988878889988777543
No 137
>TIGR03829 YokU_near_AblA uncharacterized protein, YokU family. Members of this protein family occur in various species of the genus Bacillus, always next to the gene (kamA or ablA) for lysine 2,3-aminomutase. Members have a pair of CXXC motifs, and share homology to the amino-terminal region of a family of putative transcription factors for which the C-terminal is modeled by pfam01381, a helix-turn-helix domain model. This family, however, is shorter and lacks the helix-turn-helix region. The function of this protein family is unknown, but a regulatory role in compatible solute biosynthesis is suggested by local genome context.
Probab=31.68 E-value=48 Score=25.59 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=19.6
Q ss_pred ccccccCceEEEecEEEEEEecCC
Q 019162 195 VCDQCQNVKYEREGYFVTVDIEKG 218 (345)
Q Consensus 195 ~C~~C~G~g~~~~~~~~~V~Ip~G 218 (345)
.|..|+|........++.+..|.|
T Consensus 1 ~C~~C~~~~~~~~~tTv~~el~~G 24 (89)
T TIGR03829 1 KCRWCEEEKAIARTTTVYWELPDG 24 (89)
T ss_pred CCcccCCCceecceEEEEEEecCC
Confidence 499999888888888888888766
No 138
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=29.55 E-value=43 Score=31.10 Aligned_cols=31 Identities=29% Similarity=0.415 Sum_probs=25.2
Q ss_pred EEEEecHHHHhcC-cEEEEEcCCCcEEEEEeC
Q 019162 263 TTVTVTLVQALVG-FEKTIEHLDEHLVDISTK 293 (345)
Q Consensus 263 ~~~~Isl~eAl~G-~~~~i~~ldg~~i~v~i~ 293 (345)
++.+|-|+||+.| |..+|++.|+..-.+.|.
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiT 49 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEIT 49 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEEc
Confidence 3568889999999 889999999975566654
No 139
>PLN02508 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
Probab=29.37 E-value=1.2e+02 Score=29.34 Aligned_cols=73 Identities=10% Similarity=0.153 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhhc--cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHHHHhc
Q 019162 7 RLLFLLCALCYALNV--IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDK-NQGNEEANKRFAEINNAYEVLS 79 (345)
Q Consensus 7 ~~~~~~~~~~~~~~~--~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~-~~~~~~a~~~f~~i~~Ay~~L~ 79 (345)
-.-||++++..+.-. ....++|+.|||++..-..++-+.-.+.+.+.-|-. +-++|.-......+.++...|.
T Consensus 230 W~RFFLLsVfaTMyl~d~~R~~Fy~alGld~~~yD~~Vi~~Tne~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~ 305 (357)
T PLN02508 230 WSRFFCLSVYVTMYLNDHQRTAFYEGIGLNTKQFNMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVVINQKLV 305 (357)
T ss_pred HHHHHHHHHHHHheeeccchHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCCHHHHHHHHHHHHHHHHHH
Confidence 344666776665443 455799999999997766666666667777777754 4456665555556666665554
No 140
>cd05792 S1_eIF1AD_like S1_eIF1AD_like: eukaryotic translation initiation factor 1A domain containing protein (eIF1AD)-like, S1-like RNA-binding domain. eIF1AD is also known as MGC11102 protein. Little is known about the function of eIF1AD. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins, including translation initiation factor IF1A (also referred to as eIF1A in eukaryotes). eIF1A is essential for translation initiation. eIF1A acts synergistically with eIF1 to mediate assembly of ribosomal initiation complexes at the initiation codon and maintain the accuracy of this process by recognizing and destabilizing aberrant preinitiation complexes from the mRNA. Without eIF1A and eIF1, 43S ribosomal preinitiation complexes can bind to the cap-proximal region, but are unable to reach the initiation codon. eIF1a also enhances the formation of 5'-terminal complexes in the presence of other translation initiation factors.
Probab=29.21 E-value=2.5e+02 Score=21.08 Aligned_cols=25 Identities=12% Similarity=-0.069 Sum_probs=18.6
Q ss_pred HhcCc-EEEEEcCCCcEEEEEeCCcC
Q 019162 272 ALVGF-EKTIEHLDEHLVDISTKGIT 296 (345)
Q Consensus 272 Al~G~-~~~i~~ldg~~i~v~i~~~~ 296 (345)
+++|. -+++.+.||.+..+.+|+-.
T Consensus 8 ~~~G~n~~~V~~~dG~~~l~~iP~Kf 33 (78)
T cd05792 8 GSKGNNLHEVETPNGSRYLVSMPTKF 33 (78)
T ss_pred EcCCCcEEEEEcCCCCEEEEEechhh
Confidence 34454 47899999998888898743
No 141
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=28.33 E-value=1.9e+02 Score=26.79 Aligned_cols=91 Identities=13% Similarity=0.106 Sum_probs=59.2
Q ss_pred CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhc-------CcEEEEEcCCCcEEE----EEeCCcCCCCcEEEEC
Q 019162 237 GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALV-------GFEKTIEHLDEHLVD----ISTKGITKPKEVRKFG 305 (345)
Q Consensus 237 ~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~-------G~~~~i~~ldg~~i~----v~i~~~~~~g~~~ri~ 305 (345)
..+||++|.-++.||.--+--..=-++.-+|++.++.. ..-++|.|-.|..+. +.|.+.++.|.++|+.
T Consensus 78 ~L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDTTKGNRiin~~GfAisPtvKeGyILrvs 157 (276)
T PF06675_consen 78 VLPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDTTKGNRIINHRGFAISPTVKEGYILRVS 157 (276)
T ss_pred ccCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEecCCCceeeccCCeEecccccceEEEEcC
Confidence 35899999999998865444444446666777776654 345788888775332 3377899999999998
Q ss_pred CCCcCCCCCCCCCcEEEEEEEEC
Q 019162 306 GEGMPLHFSNKKGDLYITFEVLF 328 (345)
Q Consensus 306 g~G~p~~~~~~~GDL~v~~~v~~ 328 (345)
..=+-+... ..|.+-+.|-+..
T Consensus 158 edLl~im~~-~TG~~~~~~PlT~ 179 (276)
T PF06675_consen 158 EDLLDIMER-VTGKLPVTFPLTT 179 (276)
T ss_pred HHHHHHHHh-hcCCCceEEeccc
Confidence 543333222 1366666665544
No 142
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=27.92 E-value=81 Score=18.69 Aligned_cols=18 Identities=33% Similarity=0.586 Sum_probs=14.8
Q ss_pred CHHHHHHHHHHHHHHhCC
Q 019162 38 SDEQIKRAYRKLALKYHP 55 (345)
Q Consensus 38 s~~eIk~ayr~la~~~hP 55 (345)
..++.|.+-|+.|+.||-
T Consensus 9 ~~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYHE 26 (28)
T ss_pred chHHHHHHHHHHHHHhcc
Confidence 347788899999999983
No 143
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=27.72 E-value=33 Score=37.84 Aligned_cols=39 Identities=18% Similarity=0.367 Sum_probs=24.1
Q ss_pred cCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEE
Q 019162 170 RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVT 212 (345)
Q Consensus 170 ~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~ 212 (345)
+.|+|.|.+.... +|+. -...+|+.|+|..+..+.-.++
T Consensus 740 ~~C~G~G~~~~~~---~f~~-~~~~~C~~C~G~R~~~e~l~v~ 778 (924)
T TIGR00630 740 EACQGDGVIKIEM---HFLP-DVYVPCEVCKGKRYNRETLEVK 778 (924)
T ss_pred CCCccceEEEEEc---cCCC-CcccCCCCcCCceeChHHHhce
Confidence 5788999865321 1111 1256899999998877653333
No 144
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=26.81 E-value=1e+02 Score=24.91 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=18.2
Q ss_pred EEEecCCCCCCcEEEEeecCCC
Q 019162 212 TVDIEKGMQDGQEVVFYEDGEP 233 (345)
Q Consensus 212 ~V~Ip~G~~~G~~i~~~g~G~~ 233 (345)
+..||.|+..|++|.+.|.=..
T Consensus 2 ~~~lp~~l~~G~~i~i~G~~~~ 23 (128)
T smart00276 2 TLPIPGGLKPGQTLTVRGIVLP 23 (128)
T ss_pred cccCCCCCCCCCEEEEEEEECC
Confidence 4578999999999999997443
No 145
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=26.80 E-value=76 Score=24.39 Aligned_cols=26 Identities=31% Similarity=0.474 Sum_probs=21.8
Q ss_pred cEEEEEEEECCC-CCCHHHHHHHHHHh
Q 019162 319 DLYITFEVLFPT-TLTEDQKTRIKEVL 344 (345)
Q Consensus 319 DL~v~~~v~~P~-~l~~~q~~~l~~~l 344 (345)
+.+.-|+|+.|. .|+++|++-++.+.
T Consensus 61 ~~~~~iEvK~p~~~ls~~Q~~~~~~l~ 87 (100)
T PF08774_consen 61 DIFLFIEVKGPGDRLSPNQKEWIDKLR 87 (100)
T ss_pred cEEEEEEEcCCCCCcCHHHHHHHHHHH
Confidence 368889999996 79999999988764
No 146
>cd04456 S1_IF1A_like S1_IF1A_like: Translation initiation factor IF1A-like, S1-like RNA-binding domain. IF1A is also referred to as eIF1A in eukaryotes and aIF1A in archaea. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. IF1A is essential for translation initiation. eIF1A acts synergistically with eIF1 to mediate assembly of ribosomal initiation complexes at the initiation codon and maintain the accuracy of this process by recognizing and destabilizing aberrant preinitiation complexes from the mRNA. Without eIF1A and eIF1, 43S ribosomal preinitiation complexes can bind to the cap-proximal region, but are unable to reach the initiation codon. eIF1a also enhances the formation of 5'-terminal complexes in the presence of other translation initiation factors. This protein family is only found in eukaryotes and archaea.
Probab=25.35 E-value=2.9e+02 Score=20.60 Aligned_cols=26 Identities=19% Similarity=0.121 Sum_probs=19.5
Q ss_pred HhcCcEEEEEcCCCcEEEEEeCCcCC
Q 019162 272 ALVGFEKTIEHLDEHLVDISTKGITK 297 (345)
Q Consensus 272 Al~G~~~~i~~ldg~~i~v~i~~~~~ 297 (345)
++-+..++|...||..+...+|+-.+
T Consensus 9 ~lG~~~~~V~~~dg~~~l~~i~gK~R 34 (78)
T cd04456 9 MLGNNRHEVECADGQRRLVSIPGKLR 34 (78)
T ss_pred ECCCCEEEEEECCCCEEEEEEchhhc
Confidence 44456688899999888888887544
No 147
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=23.13 E-value=63 Score=35.81 Aligned_cols=39 Identities=23% Similarity=0.420 Sum_probs=24.7
Q ss_pred cCCCccceEEEEE-ecCceEEEEeecccccccCceEEEecEEEEE
Q 019162 170 RRCNCRNEVYHKQ-IGPGMFQQMTEQVCDQCQNVKYEREGYFVTV 213 (345)
Q Consensus 170 ~~C~G~G~~~~~~-~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V 213 (345)
+.|.|.|.+.... ..+. ...+|+.|+|..+..+.-.+++
T Consensus 742 ~~C~G~G~~~~~~~f~~~-----~~~~C~~C~G~R~~~e~l~v~~ 781 (943)
T PRK00349 742 EACQGDGVIKIEMHFLPD-----VYVPCDVCKGKRYNRETLEVKY 781 (943)
T ss_pred CcccccceEEEEeccCCC-----ccccCccccCccccccceEEEE
Confidence 5788998855321 1111 2358999999988776544443
No 148
>TIGR00757 RNaseEG ribonuclease, Rne/Rng family. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome.
Probab=22.80 E-value=57 Score=32.55 Aligned_cols=16 Identities=19% Similarity=0.542 Sum_probs=13.5
Q ss_pred ecccccccCceEEEec
Q 019162 193 EQVCDQCQNVKYEREG 208 (345)
Q Consensus 193 ~~~C~~C~G~g~~~~~ 208 (345)
..+|+.|+|.|.+...
T Consensus 390 ~~~Cp~C~G~G~v~s~ 405 (414)
T TIGR00757 390 GTVCPHCSGTGIVKTS 405 (414)
T ss_pred cCCCCCCcCeeEEccH
Confidence 6789999999988754
No 149
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=22.26 E-value=1.2e+02 Score=24.93 Aligned_cols=52 Identities=13% Similarity=0.015 Sum_probs=36.9
Q ss_pred EEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEE
Q 019162 244 FRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVR 302 (345)
Q Consensus 244 v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ 302 (345)
+.|++..+..+ .+|+.-.+.|+|.+.+.+.. .+.+.++.+.....+++|++.
T Consensus 60 L~v~V~dkd~~---~DD~lG~v~i~L~~v~~~~~----~~~~~Wy~L~~~~~~~~~~~~ 111 (127)
T cd08394 60 LVIELWNKGLI---WDTLVGTVWIPLSTIRQSNE----EGPGEWLTLDSEVNMKNGQIV 111 (127)
T ss_pred EEEEEEeCCCc---CCCceEEEEEEhHHcccCCC----CCCCccEecChHHhccCCeEe
Confidence 44455445533 89999999999999988833 555667888765666667654
No 150
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=21.97 E-value=1.3e+02 Score=24.44 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=28.8
Q ss_pred EEeCCcCCCCcEEEECCCCcCCCCC------CCCCcEEEEEEEECCC
Q 019162 290 ISTKGITKPKEVRKFGGEGMPLHFS------NKKGDLYITFEVLFPT 330 (345)
Q Consensus 290 v~i~~~~~~g~~~ri~g~G~p~~~~------~~~GDL~v~~~v~~P~ 330 (345)
..+|.+..+|+.+.|.|.=.+..+. .+.+|+.++|++.|++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 3567788899999988764332211 1237999999999986
No 151
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=21.78 E-value=30 Score=33.06 Aligned_cols=11 Identities=18% Similarity=0.579 Sum_probs=6.2
Q ss_pred ecccccccCce
Q 019162 193 EQVCDQCQNVK 203 (345)
Q Consensus 193 ~~~C~~C~G~g 203 (345)
..+|++|+|+|
T Consensus 245 ~~~C~tC~grG 255 (406)
T KOG2813|consen 245 IKECHTCKGRG 255 (406)
T ss_pred cccCCcccCCC
Confidence 44566666655
No 152
>PHA02613 48 baseplate subunit; Provisional
Probab=21.70 E-value=96 Score=29.54 Aligned_cols=17 Identities=12% Similarity=0.122 Sum_probs=14.1
Q ss_pred cCCceeeeeehhheeee
Q 019162 133 KGDDVIVELDATLEDLY 149 (345)
Q Consensus 133 kg~di~~~l~itlee~~ 149 (345)
.+.++.+.|+|||.|++
T Consensus 333 PNlPssf~LEitFrEii 349 (361)
T PHA02613 333 PNLPSSFVLEITFREII 349 (361)
T ss_pred CCCCceEEEEEEEeeee
Confidence 46788899999999874
No 153
>COG2879 Uncharacterized small protein [Function unknown]
Probab=21.67 E-value=1.6e+02 Score=21.19 Aligned_cols=28 Identities=32% Similarity=0.368 Sum_probs=18.8
Q ss_pred HHHHHHHHhCCCCCCCcHHHHHHHHHHHHH
Q 019162 45 AYRKLALKYHPDKNQGNEEANKRFAEINNA 74 (345)
Q Consensus 45 ayr~la~~~hPd~~~~~~~a~~~f~~i~~A 74 (345)
-|-.-.++.|||+.+-.. ++.|++-.+|
T Consensus 27 nYVehmr~~hPd~p~mT~--~EFfrec~da 54 (65)
T COG2879 27 NYVEHMRKKHPDKPPMTY--EEFFRECQDA 54 (65)
T ss_pred HHHHHHHHhCcCCCcccH--HHHHHHHHHh
Confidence 466778999999987432 3556655543
No 154
>COG5216 Uncharacterized conserved protein [Function unknown]
Probab=21.07 E-value=51 Score=23.36 Aligned_cols=13 Identities=38% Similarity=0.613 Sum_probs=9.4
Q ss_pred eeehhheeeeccc
Q 019162 140 ELDATLEDLYMGG 152 (345)
Q Consensus 140 ~l~itlee~~~G~ 152 (345)
..+|+|+|+.+|-
T Consensus 30 RFeIsLeDl~~GE 42 (67)
T COG5216 30 RFEISLEDLRNGE 42 (67)
T ss_pred EeEEEHHHhhCCc
Confidence 4667888887774
No 155
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=20.87 E-value=1.2e+02 Score=21.37 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=17.7
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q 019162 323 TFEVLFPTTLTEDQKTRIKEV 343 (345)
Q Consensus 323 ~~~v~~P~~l~~~q~~~l~~~ 343 (345)
.-...||..||+.+|..+-++
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~ 36 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRL 36 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHH
Confidence 456789999999999988765
Done!