Query 019162
Match_columns 345
No_of_seqs 271 out of 2581
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 11:51:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 7.2E-69 2.5E-73 510.7 21.2 286 21-344 24-314 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 1.3E-53 4.4E-58 391.7 23.3 211 130-341 7-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 9.8E-49 3.4E-53 343.0 21.5 178 134-345 2-180 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 1.2E-46 4.2E-51 329.6 23.1 176 133-344 2-179 (180)
5 1c3g_A Heat shock protein 40; 100.0 9.9E-44 3.4E-48 308.4 16.9 168 135-341 1-170 (170)
6 3i38_A Putative chaperone DNAJ 99.9 7.4E-27 2.5E-31 187.4 11.2 93 249-344 2-94 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 4.3E-25 1.5E-29 180.5 12.5 93 253-345 1-97 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 9.7E-25 3.3E-29 173.6 4.1 97 24-122 2-99 (103)
9 2ctr_A DNAJ homolog subfamily 99.9 1.1E-22 3.8E-27 157.1 6.6 76 21-97 3-78 (88)
10 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.1E-22 3.9E-27 153.1 6.0 73 23-96 1-73 (77)
11 2dn9_A DNAJ homolog subfamily 99.9 1.4E-22 4.6E-27 153.4 5.3 74 21-94 3-76 (79)
12 2o37_A Protein SIS1; HSP40, J- 99.8 4.5E-22 1.5E-26 155.0 5.3 74 21-97 4-77 (92)
13 2ej7_A HCG3 gene; HCG3 protein 99.8 6.8E-22 2.3E-26 150.6 6.0 75 21-95 5-80 (82)
14 2dmx_A DNAJ homolog subfamily 99.8 6.1E-22 2.1E-26 154.2 5.7 76 22-97 6-82 (92)
15 2ctp_A DNAJ homolog subfamily 99.8 6.4E-22 2.2E-26 149.3 5.3 73 21-94 3-75 (78)
16 2yua_A Williams-beuren syndrom 99.8 1E-21 3.5E-26 155.0 5.7 70 21-90 13-82 (99)
17 2och_A Hypothetical protein DN 99.8 1.8E-21 6.1E-26 145.0 5.4 70 21-93 4-73 (73)
18 2ctq_A DNAJ homolog subfamily 99.8 7.7E-22 2.6E-26 159.2 3.6 76 20-95 15-90 (112)
19 2ctw_A DNAJ homolog subfamily 99.8 1.8E-21 6E-26 156.3 5.5 76 21-96 13-88 (109)
20 2cug_A Mkiaa0962 protein; DNAJ 99.8 2E-21 6.8E-26 150.0 5.0 73 21-94 13-85 (88)
21 2lgw_A DNAJ homolog subfamily 99.8 2.3E-21 8E-26 152.8 4.6 73 25-97 2-75 (99)
22 1wjz_A 1700030A21RIK protein; 99.8 1.6E-20 5.6E-25 146.6 4.1 70 22-91 13-88 (94)
23 3apq_A DNAJ homolog subfamily 99.8 2.5E-20 8.7E-25 165.8 5.7 73 25-97 2-74 (210)
24 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.7E-20 9.1E-25 149.4 2.9 71 22-92 12-86 (109)
25 2ys8_A RAB-related GTP-binding 99.8 4.6E-19 1.6E-23 137.3 5.2 63 23-86 25-87 (90)
26 2l6l_A DNAJ homolog subfamily 99.7 1E-18 3.6E-23 148.8 4.5 72 21-92 6-83 (155)
27 1gh6_A Large T antigen; tumor 99.7 5E-19 1.7E-23 142.6 0.4 65 24-92 7-73 (114)
28 1iur_A KIAA0730 protein; DNAJ 99.7 2.2E-18 7.5E-23 132.5 3.4 65 22-86 13-78 (88)
29 2pf4_E Small T antigen; PP2A, 99.7 4.8E-19 1.6E-23 152.3 -0.8 67 22-92 8-76 (174)
30 1faf_A Large T antigen; J doma 99.7 3E-18 1E-22 129.3 3.2 66 24-94 10-77 (79)
31 1n4c_A Auxilin; four helix bun 99.7 1.2E-17 4E-22 144.6 5.5 66 22-87 114-182 (182)
32 2qwo_B Putative tyrosine-prote 99.7 8.9E-18 3E-22 129.7 4.2 56 25-80 33-91 (92)
33 3hho_A CO-chaperone protein HS 99.7 1E-17 3.6E-22 145.1 4.1 66 24-89 3-75 (174)
34 3bvo_A CO-chaperone protein HS 99.7 3.2E-18 1.1E-22 152.1 0.2 79 11-89 29-114 (207)
35 1fpo_A HSC20, chaperone protei 99.7 2.4E-17 8.3E-22 142.4 3.4 67 25-91 1-74 (171)
36 3apo_A DNAJ homolog subfamily 99.6 1.4E-17 4.8E-22 175.1 -1.0 78 20-97 16-93 (780)
37 3ag7_A Putative uncharacterize 99.6 6.2E-17 2.1E-21 128.7 2.9 61 21-82 37-104 (106)
38 2guz_A Mitochondrial import in 99.6 1.4E-16 4.9E-21 117.7 3.9 58 24-85 13-71 (71)
39 3uo3_A J-type CO-chaperone JAC 99.6 1.6E-16 5.5E-21 138.3 2.1 68 20-90 6-80 (181)
40 2ctt_A DNAJ homolog subfamily 99.3 2.2E-13 7.7E-18 108.0 0.5 79 134-215 1-103 (104)
41 3i38_A Putative chaperone DNAJ 99.1 9.3E-11 3.2E-15 93.5 5.6 77 131-256 8-84 (109)
42 2y4t_A DNAJ homolog subfamily 99.0 2.3E-10 7.8E-15 110.0 7.2 70 20-89 377-449 (450)
43 1xao_A YDJ1, mitochondrial pro 99.0 2.6E-10 8.8E-15 92.7 4.2 80 132-258 4-88 (121)
44 2guz_B Mitochondrial import in 98.9 2E-09 6.8E-14 77.4 4.7 51 26-80 5-58 (65)
45 1c3g_A Heat shock protein 40; 98.8 1.1E-08 3.6E-13 88.0 8.3 73 259-331 1-81 (170)
46 2q2g_A HSP40 protein, heat sho 98.8 1.6E-08 5.5E-13 87.7 9.2 75 258-332 3-88 (180)
47 3agx_A DNAJ homolog subfamily 98.7 5E-08 1.7E-12 84.6 9.9 74 258-332 2-88 (181)
48 3lz8_A Putative chaperone DNAJ 98.7 2.5E-08 8.7E-13 94.4 7.3 77 255-331 137-226 (329)
49 1nlt_A Protein YDJ1, mitochond 98.6 4.3E-08 1.5E-12 89.3 4.9 76 131-253 158-236 (248)
50 1exk_A DNAJ protein; extended 97.7 2E-05 6.7E-10 58.5 3.0 49 151-204 1-61 (79)
51 2pzi_A Probable serine/threoni 92.9 0.1 3.6E-06 53.3 5.7 57 13-77 617-675 (681)
52 3lcz_A YCZA, inhibitor of trap 92.7 0.043 1.5E-06 37.2 1.6 25 171-208 14-38 (53)
53 2bx9_A Anti-trap, AT, tryptoph 87.1 0.32 1.1E-05 32.8 2.2 24 171-207 14-37 (53)
54 3pmq_A Decaheme cytochrome C M 81.1 0.13 4.5E-06 52.6 -2.7 31 138-168 168-199 (669)
55 2cqn_A Formin-binding protein 33.3 30 0.001 24.8 2.8 53 38-91 7-62 (77)
56 1uzc_A Hypothetical protein FL 29.3 42 0.0014 23.6 3.0 52 36-90 11-65 (71)
57 3ga8_A HTH-type transcriptiona 27.1 90 0.0031 21.9 4.6 30 195-229 4-33 (78)
58 2pi2_E Replication protein A 1 25.5 2.6E+02 0.0088 22.3 8.9 64 274-343 58-126 (142)
59 1n10_A PHL P I, pollen allerge 21.9 2.3E+02 0.008 24.7 7.1 84 210-303 147-239 (241)
60 2b7e_A PRE-mRNA processing pro 21.1 61 0.0021 22.0 2.4 49 39-90 2-55 (59)
61 1msz_A DNA-binding protein smu 21.0 50 0.0017 24.3 2.1 19 325-343 35-53 (86)
62 3zxf_A Galectin-7; sugar bindi 20.5 1.4E+02 0.0049 23.4 5.1 43 288-330 8-59 (138)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=7.2e-69 Score=510.67 Aligned_cols=286 Identities=26% Similarity=0.407 Sum_probs=159.5
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA 100 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~ 100 (345)
.+..+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+|+......+..
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~ 102 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFG 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcc
Confidence 344589999999999999999999999999999999998 4578899999999999999999999999985432111111
Q ss_pred CC-C-CCCCc-ccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccc
Q 019162 101 GG-G-RGGGM-GVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRN 176 (345)
Q Consensus 101 ~~-~-~~~~~-~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G 176 (345)
++ + .+++| +.++.|+|++|||++.. +..+..+++.|+.++|+|||+|+|+|+++++.+++.++|. .
T Consensus 103 ~~~~~~~~~f~~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g---------~- 172 (329)
T 3lz8_A 103 RQRQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNV---------F- 172 (329)
T ss_dssp ----------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCS---------C-
T ss_pred cccccccCCcCCCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeecC---------C-
Confidence 00 0 01122 12678999999986321 1123356899999999999999999999999998876432 1
Q ss_pred eEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCC-CCCCCceEEEEEEEcCCCCcc
Q 019162 177 EVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFR 255 (345)
Q Consensus 177 ~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~ 255 (345)
|...+...++++|+||||+++|++|+|+|+|++. .++.+|||+|+|+++||+.|+
T Consensus 173 ------------------------G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~ 228 (329)
T 3lz8_A 173 ------------------------GMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFD 228 (329)
T ss_dssp ------------------------C-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCCCSSCE
T ss_pred ------------------------eEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEecCCccE
Confidence 2222334678999999999999999999999996 467899999999999999999
Q ss_pred cccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHH
Q 019162 256 REGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTED 335 (345)
Q Consensus 256 r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~ 335 (345)
|+|+||+++++||++||++|++++|+||||+ +.|+||+++++|+++||+|+|||.. ..+|||||+|+|.||++||++
T Consensus 229 R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~--~~rGDL~v~~~V~~P~~l~~~ 305 (329)
T 3lz8_A 229 IVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK--THTGDLFAVIKIVMPTKPDEK 305 (329)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS--SCBCCEEEEEEECCCSSCCHH
T ss_pred EcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC--CCCCCEEEEEEEECCCCCCHH
Confidence 9999999999999999999999999999997 7999999999999999999999976 347999999999999999999
Q ss_pred HHHHHHHHh
Q 019162 336 QKTRIKEVL 344 (345)
Q Consensus 336 q~~~l~~~l 344 (345)
|+++|+++.
T Consensus 306 q~~~l~~~~ 314 (329)
T 3lz8_A 306 ARELWQQLA 314 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.3e-53 Score=391.67 Aligned_cols=211 Identities=29% Similarity=0.541 Sum_probs=184.3
Q ss_pred ccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC----------cCCCccceE-EEEEecCceEEEEe-----
Q 019162 130 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RRCNCRNEV-YHKQIGPGMFQQMT----- 192 (345)
Q Consensus 130 ~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------~~C~G~G~~-~~~~~~~g~~~~~~----- 192 (345)
++++++|+++.|+|||||||+|+++++.+++.+.|+ |.|+ +.|+|+|.+ ..++.++ |+++.+
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 346799999999999999999999999999999999 9876 469999984 4556777 665544
Q ss_pred ----------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcccccCCee
Q 019162 193 ----------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLH 262 (345)
Q Consensus 193 ----------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~ 262 (345)
+++|+.|+|.|++.+.++++|+||||+++|++|+|+|+|++.+++.+|||||+|+++||+.|+|+|+||+
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence 7889999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred EEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc--CCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCC--CCHHHHH
Q 019162 263 TTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI--TKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTT--LTEDQKT 338 (345)
Q Consensus 263 ~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~--~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~--l~~~q~~ 338 (345)
++++|||+||++|++++|+||||+.+.|++|++ +++|++++|+|+|||..+...+|||||+|+|.||++ ||++|++
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~ 245 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLK 245 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC----------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHH
Confidence 999999999999999999999998899999987 999999999999999865545799999999999999 9999999
Q ss_pred HHH
Q 019162 339 RIK 341 (345)
Q Consensus 339 ~l~ 341 (345)
+|+
T Consensus 246 ~l~ 248 (248)
T 1nlt_A 246 KLE 248 (248)
T ss_dssp ---
T ss_pred hhC
Confidence 875
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=9.8e-49 Score=343.03 Aligned_cols=178 Identities=28% Similarity=0.545 Sum_probs=165.4
Q ss_pred CCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEE
Q 019162 134 GDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTV 213 (345)
Q Consensus 134 g~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V 213 (345)
++|++++++|||||||+|+++++.+++ +|..|+|.|++.+.++++|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------~c~~c~G~g~~~~~~~l~V 47 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------KRLNPDGKSIRNEDKILTI 47 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE----------------------------------EEECTTSSCEEEEEEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec----------------------------------ccCCCCCceEEEEeEEEEE
Confidence 468999999999999999999998742 4889999999999999999
Q ss_pred EecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeC
Q 019162 214 DIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK 293 (345)
Q Consensus 214 ~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~ 293 (345)
+||||+++|++|+|+|+|++.+++.+|||||+|+++||+.|+|+|+||+++++||++||++|++++|+|+||+.+.|++|
T Consensus 48 ~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~ 127 (181)
T 3agx_A 48 EVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK 127 (181)
T ss_dssp EECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEEC
T ss_pred EECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECC
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999988999999
Q ss_pred CcCCCCcEEEECCCCcCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162 294 GITKPKEVRKFGGEGMPLHFS-NKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345 (345)
Q Consensus 294 ~~~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~ 345 (345)
+++++|+++||+|+|||..+. ..+|||||+|+|.||++||++|+++|+++|.
T Consensus 128 ~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~~ 180 (181)
T 3agx_A 128 DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 180 (181)
T ss_dssp SCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHSC
T ss_pred CccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhcc
Confidence 999999999999999998653 4469999999999999999999999999873
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-46 Score=329.57 Aligned_cols=176 Identities=36% Similarity=0.564 Sum_probs=164.8
Q ss_pred cCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEE
Q 019162 133 KGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVT 212 (345)
Q Consensus 133 kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~ 212 (345)
+++|++++++|||||||+|+++++.+++.+.|+ .+++.+.++++
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~------------------------------------~g~~~~~~~l~ 45 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIE------------------------------------HKVRNEENIVE 45 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEET------------------------------------TEEEEEEEEEE
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecC------------------------------------CceEEeeEEEE
Confidence 478999999999999999999999999998875 15677889999
Q ss_pred EEecCCCCCCcEEEEeecCCC-CCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEE
Q 019162 213 VDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDIS 291 (345)
Q Consensus 213 V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~ 291 (345)
|+||||+++|++|+|+|+|++ .+++.+|||||+|+++||+.|+|+|+||+++++||++||++|++++|+|+||+.+.|+
T Consensus 46 V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ 125 (180)
T 2q2g_A 46 VEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIP 125 (180)
T ss_dssp EEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEE
T ss_pred EEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEE
Confidence 999999999999999999999 7889999999999999999999999999999999999999999999999999889999
Q ss_pred eCCcCCCCcEEEECCCCcCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162 292 TKGITKPKEVRKFGGEGMPLHFS-NKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344 (345)
Q Consensus 292 i~~~~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l 344 (345)
+|+++++|+++||+|+|||..++ ..+|||||+|+|.||++||++|+++|+++|
T Consensus 126 ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 126 IKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp ECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred CCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 99999999999999999998654 446999999999999999999999999987
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=9.9e-44 Score=308.37 Aligned_cols=168 Identities=26% Similarity=0.512 Sum_probs=153.8
Q ss_pred CceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEE
Q 019162 135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVD 214 (345)
Q Consensus 135 ~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~ 214 (345)
+|++++++|||+|||+|+++++.+++. + +.|.+ +.++++|+
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~--~------------------------------------~~G~~-~~~~l~V~ 41 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--G------------------------------------PHGAS-EKTQIDIQ 41 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEE--E------------------------------------TTTEE-EEEEEEEE
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEe--c------------------------------------CCCcE-EeEEEEEE
Confidence 478999999999999999999999765 1 01234 77899999
Q ss_pred ecCCCCCCcEEEEeecCCC-CCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeC
Q 019162 215 IEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK 293 (345)
Q Consensus 215 Ip~G~~~G~~i~~~g~G~~-~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~ 293 (345)
||||+++|++|+|+|+|++ .+++.+|||||+|+++||+.|+|+|+||+++++||++||++|++++|+|+||+.+.|++|
T Consensus 42 Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~ 121 (170)
T 1c3g_A 42 LKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRV 121 (170)
T ss_dssp CCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEES
T ss_pred eCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECC
Confidence 9999999999999999995 688899999999999999999999999999999999999999999999999988999999
Q ss_pred CcCCCCcEEEECCCCcCCCCCC-CCCcEEEEEEEECCCCCCHHHHHHHH
Q 019162 294 GITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKTRIK 341 (345)
Q Consensus 294 ~~~~~g~~~ri~g~G~p~~~~~-~~GDL~v~~~v~~P~~l~~~q~~~l~ 341 (345)
+++++|+++||+|+|||..++. .+|||||+|+|.||++||++|+++|+
T Consensus 122 ~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 122 QPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp SCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred CccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 9999999999999999986543 46999999999999999999998863
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.94 E-value=7.4e-27 Score=187.42 Aligned_cols=93 Identities=19% Similarity=0.350 Sum_probs=87.3
Q ss_pred cCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEC
Q 019162 249 APHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLF 328 (345)
Q Consensus 249 ~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~ 328 (345)
+||+.|+|+|+||+++++|||.||++|++++|+|+|| .+.|+||+++++|+++||+|+|||.. + .+|||||+|+|.|
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG-~~~v~ip~g~~~G~~~rl~G~G~p~~-~-~~GDL~v~~~V~~ 78 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE-SILLTVPPGSQAGQRLRIKGKGLVSK-T-HTGDLFAVIKIVM 78 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSS-CEEEEECTTCCTTCEEEETTCSCBCS-S-CBCCEEEEEEECC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCC-CEEEeeCCCcCcCeEEEECCccCCCC-C-CCcCEEEEEEEEC
Confidence 6999999999999999999999999999999999999 58999999999999999999999984 3 5799999999999
Q ss_pred CCCCCHHHHHHHHHHh
Q 019162 329 PTTLTEDQKTRIKEVL 344 (345)
Q Consensus 329 P~~l~~~q~~~l~~~l 344 (345)
|++||++|+++|++++
T Consensus 79 P~~Ls~~q~~~l~~l~ 94 (109)
T 3i38_A 79 PTKPDEKARELWQQLA 94 (109)
T ss_dssp CSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 9999999999999986
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.3e-25 Score=180.50 Aligned_cols=93 Identities=26% Similarity=0.496 Sum_probs=83.9
Q ss_pred CcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc--CCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCC
Q 019162 253 RFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI--TKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPT 330 (345)
Q Consensus 253 ~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~--~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~ 330 (345)
.|+|+|+||+++++|||.||++|++++|+|+||+.+.|++|++ +++|+++||+|+|||..+++.+|||||+|+|.||+
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~ 80 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPE 80 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence 4999999999999999999999999999999998899999988 99999999999999986554579999999999999
Q ss_pred C--CCHHHHHHHHHHhC
Q 019162 331 T--LTEDQKTRIKEVLG 345 (345)
Q Consensus 331 ~--l~~~q~~~l~~~l~ 345 (345)
+ ||++|+++|++++.
T Consensus 81 ~~~ls~~q~~~l~~l~~ 97 (121)
T 1xao_A 81 NHFTSEENLKKLEEILP 97 (121)
T ss_dssp TTCSCHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHcc
Confidence 9 99999999999873
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.90 E-value=9.7e-25 Score=173.64 Aligned_cols=97 Identities=49% Similarity=0.976 Sum_probs=70.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC-
Q 019162 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG- 102 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~- 102 (345)
..|||+||||+++||.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|++++..+..++
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~ 81 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 81 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence 5799999999999999999999999999999999986677889999999999999999999999999998876432111
Q ss_pred CCCCCcccChhhhhhhhcCC
Q 019162 103 GRGGGMGVNIQDIFSSFFGG 122 (345)
Q Consensus 103 ~~~~~~~~~~~d~F~~~fg~ 122 (345)
++++ +.++.++|++||++
T Consensus 82 ~~~~--~~~~~~~f~~~f~~ 99 (103)
T 1bq0_A 82 GFGG--GADFSDIFGDVFGD 99 (103)
T ss_dssp --------------------
T ss_pred CCCC--CCCHHHHHHHHHHh
Confidence 1111 12556777777753
No 9
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=1.1e-22 Score=157.12 Aligned_cols=76 Identities=49% Similarity=0.841 Sum_probs=70.8
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ 97 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 97 (345)
+....|||+||||+++|+.++||+|||+|+++||||+++ ++++.++|++|++||++|+||.+|+.||.+|..++..
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 78 (88)
T 2ctr_A 3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTS 78 (88)
T ss_dssp SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTC
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccc
Confidence 345689999999999999999999999999999999998 6788999999999999999999999999999887754
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.87 E-value=1.1e-22 Score=153.07 Aligned_cols=73 Identities=62% Similarity=1.066 Sum_probs=68.2
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK 96 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 96 (345)
+..|||+||||+++||.++||+|||+|+++||||+++ ++.+.+.|+.|++||++|+||.+|+.||++|++++.
T Consensus 1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 3579999999999999999999999999999999998 466889999999999999999999999999988764
No 11
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.4e-22 Score=153.42 Aligned_cols=74 Identities=46% Similarity=0.814 Sum_probs=69.0
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG 94 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 94 (345)
.....|||+||||+++|+.++||+|||+|+++||||++++++++.+.|++|++||++|+||.+|+.||++|..+
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 45568999999999999999999999999999999999877888999999999999999999999999998754
No 12
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.85 E-value=4.5e-22 Score=154.97 Aligned_cols=74 Identities=42% Similarity=0.844 Sum_probs=68.2
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ 97 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 97 (345)
+.+..|||+||||+++|+.++||+|||+|+++||||+++++. ++|++|++||++|+||.+|+.||++|++++..
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCH---HHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChH---HHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 456789999999999999999999999999999999998553 68999999999999999999999999988764
No 13
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=6.8e-22 Score=150.62 Aligned_cols=75 Identities=60% Similarity=0.938 Sum_probs=68.2
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 95 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 95 (345)
.....|||+||||+++|+.++||+|||+|+++||||+++++ +.+.++|++|++||++|+||.+|+.||.+|+.++
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 34467999999999999999999999999999999999865 3688999999999999999999999999997654
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=6.1e-22 Score=154.20 Aligned_cols=76 Identities=54% Similarity=0.836 Sum_probs=69.5
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ 97 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 97 (345)
....|||+||||+++|+.++||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||.+|..++..
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 4457999999999999999999999999999999999855 468899999999999999999999999999877653
No 15
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=6.4e-22 Score=149.34 Aligned_cols=73 Identities=51% Similarity=0.850 Sum_probs=67.9
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG 94 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 94 (345)
.....|||+||||+++|+.++||+|||+|+++||||+++ .+.+.+.|++|++||++|+||.+|+.||++|+.+
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 345689999999999999999999999999999999998 5778899999999999999999999999998754
No 16
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1e-21 Score=155.00 Aligned_cols=70 Identities=40% Similarity=0.674 Sum_probs=66.0
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTY 90 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 90 (345)
.+...|||+||||+++|+.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 4566899999999999999999999999999999999987788999999999999999999999999984
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=1.8e-21 Score=145.02 Aligned_cols=70 Identities=53% Similarity=0.905 Sum_probs=62.4
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE 93 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 93 (345)
+....|||+||||+++|+.++||+|||+|+++||||+++++ .+.|++|++||++|+||.+|+.||++|++
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 44568999999999999999999999999999999999854 47899999999999999999999999863
No 18
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=7.7e-22 Score=159.17 Aligned_cols=76 Identities=30% Similarity=0.487 Sum_probs=70.4
Q ss_pred hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162 20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL 95 (345)
Q Consensus 20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 95 (345)
.+....|||+||||+++|+.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|..++
T Consensus 15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 3455689999999999999999999999999999999998777899999999999999999999999999988765
No 19
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.8e-21 Score=156.27 Aligned_cols=76 Identities=54% Similarity=0.892 Sum_probs=71.2
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK 96 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 96 (345)
.....|||+||||+++|+.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||.+|..++.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 4556899999999999999999999999999999999997788999999999999999999999999999987764
No 20
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=2e-21 Score=150.04 Aligned_cols=73 Identities=47% Similarity=0.735 Sum_probs=67.3
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG 94 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 94 (345)
.....|||+||||+++|+.++||+|||+|+++||||+++ ++.+.+.|++|++||++|+||.+|..||.+|+.+
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 345679999999999999999999999999999999998 4678899999999999999999999999998753
No 21
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.83 E-value=2.3e-21 Score=152.78 Aligned_cols=73 Identities=60% Similarity=1.008 Sum_probs=65.4
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ 97 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 97 (345)
.|||+||||+++||.++||+|||+|+++||||+++++ ..+.+.|++|++||++|+||.+|+.||.+|.+++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 6999999999999999999999999999999999855 458899999999999999999999999999877653
No 22
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=1.6e-20 Score=146.61 Aligned_cols=70 Identities=36% Similarity=0.652 Sum_probs=64.2
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------HHHHHHHHHHHHHHHHhccccccccccccC
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN------EEANKRFAEINNAYEVLSDSETRNIYDTYG 91 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g 91 (345)
....|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||.+.
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 4567999999999999999999999999999999998743 568899999999999999999999999864
No 23
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.80 E-value=2.5e-20 Score=165.81 Aligned_cols=73 Identities=49% Similarity=0.870 Sum_probs=69.2
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ 97 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 97 (345)
+|||++|||+++||.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|+.++..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999878889999999999999999999999999999887653
No 24
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.78 E-value=2.7e-20 Score=149.44 Aligned_cols=71 Identities=38% Similarity=0.610 Sum_probs=65.6
Q ss_pred cCCcccccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---cHHHHHHHHHHHHHHHHhccccccccccccCc
Q 019162 22 IAGKSYYEVLQVPRGA-SDEQIKRAYRKLALKYHPDKNQG---NEEANKRFAEINNAYEVLSDSETRNIYDTYGE 92 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~a-s~~eIk~ayr~la~~~hPd~~~~---~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 92 (345)
....|||+||||+++| |.++||+|||+|+++||||++++ .+.+.+.|++|++||++|+||.+|+.||+++.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4468999999999999 99999999999999999999985 35688999999999999999999999999875
No 25
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=4.6e-19 Score=137.25 Aligned_cols=63 Identities=32% Similarity=0.477 Sum_probs=58.8
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccc
Q 019162 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86 (345)
Q Consensus 23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~ 86 (345)
...|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+|+.+|+.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCcccccC
Confidence 4689999999999999999999999999999999998 56688999999999999999999874
No 26
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=1e-18 Score=148.80 Aligned_cols=72 Identities=33% Similarity=0.596 Sum_probs=64.8
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH------HHHHHHHHHHHHHHHhccccccccccccCc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE------EANKRFAEINNAYEVLSDSETRNIYDTYGE 92 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 92 (345)
.+..+|||+||||+++|+.++||+|||+|++++|||+++++. .|.+.|++|++||++|+||.+|+.||..+.
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 345679999999999999999999999999999999997542 367999999999999999999999998653
No 27
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.72 E-value=5e-19 Score=142.62 Aligned_cols=65 Identities=22% Similarity=0.425 Sum_probs=60.9
Q ss_pred CcccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCc
Q 019162 24 GKSYYEVLQVPRGASD--EQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGE 92 (345)
Q Consensus 24 ~~~~y~iLgv~~~as~--~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 92 (345)
..+||+||||+++|+. ++||+|||+|++++|||++++ .++|++|++||++|+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999999 999999999999999999984 3789999999999999999999999885
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.71 E-value=2.2e-18 Score=132.54 Aligned_cols=65 Identities=28% Similarity=0.359 Sum_probs=58.6
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhcccccccc
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNI 86 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~ 86 (345)
....++|+||||+++||.+|||+|||+|+++||||+++++ .+|.++|++|++||++|+|...|..
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 3447999999999999999999999999999999999866 4588999999999999999887743
No 29
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.71 E-value=4.8e-19 Score=152.33 Aligned_cols=67 Identities=21% Similarity=0.379 Sum_probs=58.9
Q ss_pred cCCcccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCc
Q 019162 22 IAGKSYYEVLQVPRGAS--DEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGE 92 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as--~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 92 (345)
....|||++|||+++|+ .+|||+|||++|+++|||++++. ++|++|++||++|+||.+|+.||++|.
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~----e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 34479999999999998 69999999999999999999742 789999999999999999999999996
No 30
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.71 E-value=3e-18 Score=129.32 Aligned_cols=66 Identities=23% Similarity=0.408 Sum_probs=58.9
Q ss_pred CcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162 24 GKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG 94 (345)
Q Consensus 24 ~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 94 (345)
..++|+||||+++ ||.++||+|||+|+++||||+++ + .++|++|++||++|+|+.+|.. +.||+.+
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~-~---~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C---HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 3689999999999 99999999999999999999987 3 3789999999999999999887 5577653
No 31
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.69 E-value=1.2e-17 Score=144.56 Aligned_cols=66 Identities=30% Similarity=0.535 Sum_probs=60.4
Q ss_pred cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHH---HHHHHHHHHHHHHHhccccccccc
Q 019162 22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE---ANKRFAEINNAYEVLSDSETRNIY 87 (345)
Q Consensus 22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~y 87 (345)
+...|||++|||+++|+.++||+|||+++++||||++++... |+++|++|++||++|+|+.+|+.|
T Consensus 114 ~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 114 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 344799999999999999999999999999999999975543 889999999999999999999987
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.69 E-value=8.9e-18 Score=129.70 Aligned_cols=56 Identities=29% Similarity=0.471 Sum_probs=52.1
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH---HHHHHHHHHHHHHHHhcc
Q 019162 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE---EANKRFAEINNAYEVLSD 80 (345)
Q Consensus 25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~---~a~~~f~~i~~Ay~~L~d 80 (345)
.++|++|||+++||.+|||+|||++|++||||+|++++ .|+++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999998654 388999999999999975
No 33
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.68 E-value=1e-17 Score=145.09 Aligned_cols=66 Identities=29% Similarity=0.500 Sum_probs=60.7
Q ss_pred CcccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCcHH-----HHHHHHHHHHHHHHhccccccccccc
Q 019162 24 GKSYYEVLQVPRGAS--DEQIKRAYRKLALKYHPDKNQGNEE-----ANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 24 ~~~~y~iLgv~~~as--~~eIk~ayr~la~~~hPd~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
..|||++|||+++|+ .++||+|||+|+++||||++++... |.+.|+.|++||++|+||.+|+.||.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~ 75 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLL 75 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 579999999999998 9999999999999999999976543 67899999999999999999999997
No 34
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.68 E-value=3.2e-18 Score=152.06 Aligned_cols=79 Identities=18% Similarity=0.270 Sum_probs=66.3
Q ss_pred HHHHHHHhhhccCCcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccc
Q 019162 11 LLCALCYALNVIAGKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSET 83 (345)
Q Consensus 11 ~~~~~~~~~~~~~~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~ 83 (345)
|+..|....++....|||++|||+++ ++.++||+|||+|+++||||+++++. .|.++|++|++||++|+||.+
T Consensus 29 fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~ 108 (207)
T 3bvo_A 29 FCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLS 108 (207)
T ss_dssp BCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred ccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 34444444455557899999999996 79999999999999999999997542 266889999999999999999
Q ss_pred cccccc
Q 019162 84 RNIYDT 89 (345)
Q Consensus 84 r~~yd~ 89 (345)
|+.||.
T Consensus 109 R~~Yd~ 114 (207)
T 3bvo_A 109 RGLYLL 114 (207)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999995
No 35
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.66 E-value=2.4e-17 Score=142.36 Aligned_cols=67 Identities=24% Similarity=0.390 Sum_probs=61.0
Q ss_pred cccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccccccccccC
Q 019162 25 KSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYDTYG 91 (345)
Q Consensus 25 ~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g 91 (345)
.|||++|||++++ |.++||+|||+|+++||||++++.+ .|.++|+.|++||++|+||.+|+.||...
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 3899999999999 9999999999999999999998653 25689999999999999999999999753
No 36
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.63 E-value=1.4e-17 Score=175.09 Aligned_cols=78 Identities=46% Similarity=0.791 Sum_probs=40.9
Q ss_pred hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162 20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ 97 (345)
Q Consensus 20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 97 (345)
......|||++|||+++||.+|||+|||+||++||||+++++++|.++|++|++||++|+||.+|+.||+||++++..
T Consensus 16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 345568999999999999999999999999999999999877889999999999999999999999999999987754
No 37
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.63 E-value=6.2e-17 Score=128.73 Aligned_cols=61 Identities=21% Similarity=0.379 Sum_probs=53.4
Q ss_pred ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---cH----HHHHHHHHHHHHHHHhcccc
Q 019162 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG---NE----EANKRFAEINNAYEVLSDSE 82 (345)
Q Consensus 21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~---~~----~a~~~f~~i~~Ay~~L~d~~ 82 (345)
.+...|||++||++. ||.++||+|||++|++||||++++ ++ .|+++|++|++||++|+|+.
T Consensus 37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 344579999999996 999999999999999999999863 21 47899999999999999986
No 38
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.4e-16 Score=117.65 Aligned_cols=58 Identities=24% Similarity=0.364 Sum_probs=52.3
Q ss_pred CcccccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccc
Q 019162 24 GKSYYEVLQVPR-GASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRN 85 (345)
Q Consensus 24 ~~~~y~iLgv~~-~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~ 85 (345)
..++|+||||++ +||.++||+|||+|+++||||+++ ++ +.|++|++||++|+++..|+
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~~---~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-SP---FLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-CH---HHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CH---HHHHHHHHHHHHHhhhhhcC
Confidence 368999999999 799999999999999999999975 43 68999999999999987763
No 39
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.60 E-value=1.6e-16 Score=138.26 Aligned_cols=68 Identities=25% Similarity=0.483 Sum_probs=60.4
Q ss_pred hccCCccccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162 20 NVIAGKSYYEVL------QVPR-GASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTY 90 (345)
Q Consensus 20 ~~~~~~~~y~iL------gv~~-~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 90 (345)
......|||++| |+++ +||.++||+|||+|+++||||++++ +.++|+.|++||++|+||.+|+.||..
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 345567999999 4665 9999999999999999999999985 568899999999999999999999973
No 40
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=2.2e-13 Score=107.97 Aligned_cols=79 Identities=14% Similarity=0.120 Sum_probs=64.7
Q ss_pred CCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------cCCCccceEEEEEecCceEEEE----------
Q 019162 134 GDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQM---------- 191 (345)
Q Consensus 134 g~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~~---------- 191 (345)
|.|+.+.|+|||||||+|.+++|.+++.+.|+ |.|+ +.|+|+|.+...+ |+ +++.
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~-G~--~~~~~~C~~C~G~G 77 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT-GP--FVMRSTCRRCGGRG 77 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE-TT--EEEEEECSSSSSSS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe-CC--EEEEEECCcCCCcc
Confidence 56889999999999999999999999999999 8774 4689999865444 44 3322
Q ss_pred --eecccccccCceEEEecEEEEEEe
Q 019162 192 --TEQVCDQCQNVKYEREGYFVTVDI 215 (345)
Q Consensus 192 --~~~~C~~C~G~g~~~~~~~~~V~I 215 (345)
.+++|+.|+|.|++.+.++|+|+|
T Consensus 78 ~~i~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 78 SIIISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp EECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred eECCCcCCCCCCeeEEEEEEEEEEEc
Confidence 167899999999999988888865
No 41
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.09 E-value=9.3e-11 Score=93.53 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=64.4
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+.+++.|||.||+.|++++|..- .. .
T Consensus 8 ~R~G~DL~~~~~Isl~eAl~G~~i~v~tl-----------------------------------------------dG-~ 39 (109)
T 3i38_A 8 DIVGHNLEIVLPLAPWEAALGAKVTVPTL-----------------------------------------------KE-S 39 (109)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCS-----------------------------------------------SS-C
T ss_pred EEECCEEEEEEEcCHHHHhCCCEEEEEcC-----------------------------------------------CC-C
Confidence 46799999999999999999998877531 11 4
Q ss_pred EEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCccc
Q 019162 211 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRR 256 (345)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r 256 (345)
++|+||+|+++|++++++|+|.+..+ .+|||||+++|.-......
T Consensus 40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~ 84 (109)
T 3i38_A 40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDE 84 (109)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCH
T ss_pred EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCH
Confidence 78999999999999999999998644 7899999999986655443
No 42
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.04 E-value=2.3e-10 Score=109.97 Aligned_cols=70 Identities=44% Similarity=0.733 Sum_probs=58.5
Q ss_pred hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---HHHHHHHHHHHHHHHHhccccccccccc
Q 019162 20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN---EEANKRFAEINNAYEVLSDSETRNIYDT 89 (345)
Q Consensus 20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 89 (345)
......++|.+||+.++++.++|+++|+++++++|||+.+.. ..++++|++|++||++|+|+.+|..||+
T Consensus 377 ~~~~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 377 KQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp HHHHSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hcccchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 334456999999999999999999999999999999999844 3488999999999999999999999995
No 43
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.98 E-value=2.6e-10 Score=92.68 Aligned_cols=80 Identities=23% Similarity=0.315 Sum_probs=63.5
Q ss_pred ccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEE
Q 019162 132 VKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFV 211 (345)
Q Consensus 132 ~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~ 211 (345)
++|.|+.+++.|||.||+.|++++|..- ..+.+
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl-----------------------------------------------dG~~~ 36 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV-----------------------------------------------SGDWL 36 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT-----------------------------------------------TSCEE
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC-----------------------------------------------CCCEE
Confidence 5799999999999999999998877530 23468
Q ss_pred EEEecCC--CCCCcEEEEeecCCCCCCC-CCceEEEEEEEcCCCC--ccccc
Q 019162 212 TVDIEKG--MQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPHDR--FRREG 258 (345)
Q Consensus 212 ~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDL~v~i~~~~h~~--f~r~g 258 (345)
+|+||+| +++|++++++|+|.+..++ ..|||||++++.-... +..+.
T Consensus 37 ~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q 88 (121)
T 1xao_A 37 KVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEEN 88 (121)
T ss_dssp EEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHH
T ss_pred EEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHH
Confidence 9999999 9999999999999985433 6899999999996554 54443
No 44
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.86 E-value=2e-09 Score=77.38 Aligned_cols=51 Identities=14% Similarity=0.100 Sum_probs=45.4
Q ss_pred ccccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcc
Q 019162 26 SYYEVLQVPRG---ASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80 (345)
Q Consensus 26 ~~y~iLgv~~~---as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d 80 (345)
+-|.||||+++ ++.++|+++||+|...+|||+.. ++ ....+|++|++.|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S~---yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-SF---YLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-CH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHHHH
Confidence 45889999999 99999999999999999999986 44 667889999999864
No 45
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.80 E-value=1.1e-08 Score=88.03 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=62.0
Q ss_pred CCeeEEEEecHHHHhcCcEEEEEcC----CC----cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCC
Q 019162 259 NNLHTTVTVTLVQALVGFEKTIEHL----DE----HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPT 330 (345)
Q Consensus 259 ~DL~~~~~Isl~eAl~G~~~~i~~l----dg----~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~ 330 (345)
.|+.+++.|||.||+.|++++|... +| ++++|+||+++.+|+++|++|+|-+...+...|||||++++.-..
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~ 80 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP 80 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCC
Confidence 3899999999999999999888653 23 689999999999999999999998765555569999999997654
Q ss_pred C
Q 019162 331 T 331 (345)
Q Consensus 331 ~ 331 (345)
.
T Consensus 81 ~ 81 (170)
T 1c3g_A 81 N 81 (170)
T ss_dssp S
T ss_pred c
Confidence 3
No 46
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.79 E-value=1.6e-08 Score=87.70 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=62.2
Q ss_pred cCCeeEEEEecHHHHhcCcEEEEEcC-----------CCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEE
Q 019162 258 GNNLHTTVTVTLVQALVGFEKTIEHL-----------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV 326 (345)
Q Consensus 258 g~DL~~~~~Isl~eAl~G~~~~i~~l-----------dg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v 326 (345)
|.|+.+++.|||.||+.|++++|... ..++++|.||+++.+|+++|++|+|-+...+...|||||++++
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~ 82 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQT 82 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEE
Confidence 78999999999999999999887643 2467899999999999999999999883334456999999999
Q ss_pred ECCCCC
Q 019162 327 LFPTTL 332 (345)
Q Consensus 327 ~~P~~l 332 (345)
.-...+
T Consensus 83 ~~h~~F 88 (180)
T 2q2g_A 83 KTHPRF 88 (180)
T ss_dssp CCCSSC
T ss_pred EecccE
Confidence 755443
No 47
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.72 E-value=5e-08 Score=84.62 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=59.2
Q ss_pred cCCeeEEEEecHHHHhcCcEEEEEcC------CC-------cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEE
Q 019162 258 GNNLHTTVTVTLVQALVGFEKTIEHL------DE-------HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITF 324 (345)
Q Consensus 258 g~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~ 324 (345)
+.|+.+++.|||.||+.|++++|... .| ++++|.||+++.+|+++|++|+|-+..+ +..|||||.+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~-g~~GDl~v~i 80 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN-NIPADIVFVL 80 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS-SCCCCEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC-CCcccEEEEE
Confidence 57999999999999999999877532 34 5789999999999999999999998664 3469999999
Q ss_pred EEECCCCC
Q 019162 325 EVLFPTTL 332 (345)
Q Consensus 325 ~v~~P~~l 332 (345)
++.-...+
T Consensus 81 ~~~~h~~F 88 (181)
T 3agx_A 81 KDKPHNIF 88 (181)
T ss_dssp EECCCSSC
T ss_pred EEeccccc
Confidence 99765544
No 48
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.68 E-value=2.5e-08 Score=94.35 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=61.5
Q ss_pred ccccCCeeEEEEecHHHHhcCcEEEEEcC------C-------CcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEE
Q 019162 255 RREGNNLHTTVTVTLVQALVGFEKTIEHL------D-------EHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLY 321 (345)
Q Consensus 255 ~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------d-------g~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~ 321 (345)
.+.|.||.+++.|+|.||+.|+++.|... . .++++|+||+++++|+++|++|+|.|..++...||||
T Consensus 137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~ 216 (329)
T 3lz8_A 137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLW 216 (329)
T ss_dssp CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEE
T ss_pred cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEE
Confidence 35688999999999999999988766543 2 2468899999999999999999999976555579999
Q ss_pred EEEEEECCCC
Q 019162 322 ITFEVLFPTT 331 (345)
Q Consensus 322 v~~~v~~P~~ 331 (345)
|+|+|.-...
T Consensus 217 v~I~v~~h~~ 226 (329)
T 3lz8_A 217 LVIHIAPHPL 226 (329)
T ss_dssp EEECCCCCSS
T ss_pred EEEEEecCCc
Confidence 9998876543
No 49
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=98.56 E-value=4.3e-08 Score=89.28 Aligned_cols=76 Identities=24% Similarity=0.373 Sum_probs=63.5
Q ss_pred cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF 210 (345)
Q Consensus 131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~ 210 (345)
.++|.|+++++.|||.||+.|.+++|..- ..+.
T Consensus 158 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl-----------------------------------------------dG~~ 190 (248)
T 1nlt_A 158 KRDGDDLVYEAEIDLLTAIAGGEFALEHV-----------------------------------------------SGDW 190 (248)
T ss_dssp EEETTEEEEEEEEEHHHHHHCBCCEEECS-----------------------------------------------SSCE
T ss_pred eeeCCEEEEEEEeCHHHHhcCCEEEEeCC-----------------------------------------------CCCE
Confidence 46799999999999999999998888541 3346
Q ss_pred EEEEecCC--CCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCC
Q 019162 211 VTVDIEKG--MQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDR 253 (345)
Q Consensus 211 ~~V~Ip~G--~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~ 253 (345)
++|+||+| +++|++++++|+|.+..+ ...|||||+++|.-...
T Consensus 191 ~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~ 236 (248)
T 1nlt_A 191 LKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPEN 236 (248)
T ss_dssp EECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-
T ss_pred EEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCC
Confidence 89999999 999999999999998533 26799999999985543
No 50
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.68 E-value=2e-05 Score=58.54 Aligned_cols=49 Identities=22% Similarity=0.371 Sum_probs=32.0
Q ss_pred cceEEEEEEeeeeeC-CCCC-----------cCCCccceEEEEEecCceEEEEeecccccccCceE
Q 019162 151 GGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKY 204 (345)
Q Consensus 151 G~~~~v~~~r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~ 204 (345)
|++++|.+++.+.|+ |.|+ +.|+|+|.+...+ |+++. ..+|+.|+|.|.
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~--~~~C~~C~G~G~ 61 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ---GFFAV--QQTCPHCQGRGT 61 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE---TTEEE--EEECTTTTTSSE
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc---CCCEE--eeECcCCCCccE
Confidence 567788889999998 8764 4689999865544 44442 223444444443
No 51
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=92.92 E-value=0.1 Score=53.34 Aligned_cols=57 Identities=16% Similarity=0.100 Sum_probs=43.8
Q ss_pred HHHHHhhhccCCcccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHH
Q 019162 13 CALCYALNVIAGKSYYEVLQVPRGASD--EQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEV 77 (345)
Q Consensus 13 ~~~~~~~~~~~~~~~y~iLgv~~~as~--~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~ 77 (345)
......|.....+|||.+||++.++.. .+|++|||++|+..+++ .+++..|..|+.|
T Consensus 617 l~~~l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 617 LGGALDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp HHHHHHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 333455566667789999999776655 77999999999975444 3789999999886
No 52
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=92.72 E-value=0.043 Score=37.23 Aligned_cols=25 Identities=16% Similarity=0.311 Sum_probs=19.6
Q ss_pred CCCccceEEEEEecCceEEEEeecccccccCceEEEec
Q 019162 171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREG 208 (345)
Q Consensus 171 ~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~ 208 (345)
.|+|+|.+. .++|+.|+|.|++.+.
T Consensus 14 ~C~GsG~~i-------------~~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 14 NCNGSGREE-------------PEPCPKCLGKGVILTA 38 (53)
T ss_dssp TTTTSCEET-------------TEECTTTTTSSEEECH
T ss_pred CCcccccCC-------------CCcCCCCCCcEEEEEE
Confidence 688888742 4679999999988764
No 53
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=87.09 E-value=0.32 Score=32.83 Aligned_cols=24 Identities=17% Similarity=0.389 Sum_probs=18.5
Q ss_pred CCCccceEEEEEecCceEEEEeecccccccCceEEEe
Q 019162 171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYERE 207 (345)
Q Consensus 171 ~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~ 207 (345)
.|+|+|.+. ..+|+.|+|.|.+..
T Consensus 14 ~C~GsG~~~-------------~~~C~~C~G~G~v~~ 37 (53)
T 2bx9_A 14 KCERAGEIE-------------GTPCPACSGKGVILT 37 (53)
T ss_dssp TTTTSSEET-------------TEECTTTTTSSEEEC
T ss_pred CCcceeccC-------------CCCCccCCCCccEEE
Confidence 688888742 357999999998765
No 54
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=81.14 E-value=0.13 Score=52.56 Aligned_cols=31 Identities=3% Similarity=-0.338 Sum_probs=28.1
Q ss_pred eeeeehhheeeeccceEEEEEEeeeeeC-CCC
Q 019162 138 IVELDATLEDLYMGGSLKVWREKNVIKP-APG 168 (345)
Q Consensus 138 ~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g 168 (345)
.+++.|+|+|++.|.++++.+.+...|. |+|
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHG 199 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHS 199 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHS
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCC
Confidence 4788999999999999999999999998 754
No 55
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=33.28 E-value=30 Score=24.85 Aligned_cols=53 Identities=19% Similarity=0.353 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCc--HHHHHHHHHHHHHHHHhcc-ccccccccccC
Q 019162 38 SDEQIKRAYRKLALKYHPDKNQGN--EEANKRFAEINNAYEVLSD-SETRNIYDTYG 91 (345)
Q Consensus 38 s~~eIk~ayr~la~~~hPd~~~~~--~~a~~~f~~i~~Ay~~L~d-~~~r~~yd~~g 91 (345)
-+..++.+|+.+.+...|.....+ ..+...|..-. +|..+.+ ..++.+|+.|-
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 466788999999999888776543 44556565544 7998866 57777888764
No 56
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=29.28 E-value=42 Score=23.65 Aligned_cols=52 Identities=25% Similarity=0.403 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH--HHHHhcc-cccccccccc
Q 019162 36 GASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINN--AYEVLSD-SETRNIYDTY 90 (345)
Q Consensus 36 ~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~--Ay~~L~d-~~~r~~yd~~ 90 (345)
-+|.+|.+++|++|...++-+..-.-. +....|.. -|.+|.+ ..+++.|+.|
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~tWe---~~~~~i~~DpRY~al~~~~eRk~~F~ey 65 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNASWE---QAMKMIINDPRYSALAKLSEKKQAFNAY 65 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTCCHH---HHHHHHHTSGGGGGCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCCCHH---HHHHHHccCccccccCCHHHHHHHHHHH
Confidence 468999999999999988644443222 22223322 4555654 2344445443
No 57
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=27.08 E-value=90 Score=21.94 Aligned_cols=30 Identities=13% Similarity=0.216 Sum_probs=22.2
Q ss_pred ccccccCceEEEecEEEEEEecCCCCCCcEEEEee
Q 019162 195 VCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYE 229 (345)
Q Consensus 195 ~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g 229 (345)
.|+.|.+...+.....+++.. .|..+++++
T Consensus 4 ~Cp~Cg~~~l~~~~~~~~~~~-----~G~~~~I~~ 33 (78)
T 3ga8_A 4 KCPVCHQGEMVSGIKDIPYTF-----RGRKTVLKG 33 (78)
T ss_dssp BCTTTSSSBEEEEEEEEEEEE-----TTEEEEEEE
T ss_pred ECCCCCCCeeEeEEEEEEEEE-----CCEEEEEcC
Confidence 599998877777777777765 566777765
No 58
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=25.52 E-value=2.6e+02 Score=22.31 Aligned_cols=64 Identities=11% Similarity=-0.005 Sum_probs=47.5
Q ss_pred cCcEEEEEcCCCcEEEEEeCC--cCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCC---CCHHHHHHHHHH
Q 019162 274 VGFEKTIEHLDEHLVDISTKG--ITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTT---LTEDQKTRIKEV 343 (345)
Q Consensus 274 ~G~~~~i~~ldg~~i~v~i~~--~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~---l~~~q~~~l~~~ 343 (345)
.|.++.+.+.||..++|..++ ....+..+-+-|+-.+ .+.+-..--+.|.++ ++.+..+.+-++
T Consensus 58 ~G~~~~l~s~Dg~~VtV~l~~pL~~~~~~~VEViG~V~~------~~tI~~~~~~~fGd~~~~fD~~~yn~lv~l 126 (142)
T 2pi2_E 58 TGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVGRVTA------KATILCTSYVQFKEDSHPFDLGLYNEAVKI 126 (142)
T ss_dssp TSSEEEEECTTSCEEEEECSSCCSSCCCSEEEEEEEECT------TSCEEEEEEEECCCSSSCCCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEeCCCCCccCCCEEEEEEEECC------CCcEEEEEEEecCCCccccCHHHHHHHHHH
Confidence 488999999999989998754 3456778888876433 366777778899987 887766665554
No 59
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=21.89 E-value=2.3e+02 Score=24.67 Aligned_cols=84 Identities=14% Similarity=0.108 Sum_probs=45.6
Q ss_pred EEEEEecCCCCCCcEEE-EeecCCCCCCCCCceEEEEEEEcCCC--Cc---ccccCCeeEEEEecHHHHhcC-cEEEEEc
Q 019162 210 FVTVDIEKGMQDGQEVV-FYEDGEPKIDGEPGDLKFRIRTAPHD--RF---RREGNNLHTTVTVTLVQALVG-FEKTIEH 282 (345)
Q Consensus 210 ~~~V~Ip~G~~~G~~i~-~~g~G~~~~~~~~GDL~v~i~~~~h~--~f---~r~g~DL~~~~~Isl~eAl~G-~~~~i~~ 282 (345)
.|.+.|..|....-..+ +.+.|. .|| +..|+++... .| +|.-...+..-.. ..|.| .++.|.+
T Consensus 147 ~i~f~v~~Gs~~~~~~vlv~n~~g------~g~-V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~---~~l~gpls~RvT~ 216 (241)
T 1n10_A 147 KVTFHVEKGSNPNYLALLVKYVNG------DGD-VVAVDIKEKGKDKWIELKESWGAIWRIDTP---DKLTGPFTVRYTT 216 (241)
T ss_dssp CCEEEECTTCBTTEEEEEEECCCC------SSC-EEEEEEEETTCCCCEECBCCTTTCEEEECS---SCCCSCEEEEEEE
T ss_pred ceEEEEcCCCCcceEEEEEEecCC------CCC-EEEEEEEeCCCCCeEECccCcCcEEEeCCC---CCCCCCEEEEEEE
Confidence 46677777655444333 333321 244 4556666542 33 3332222222111 11334 6788889
Q ss_pred CCCcEEEEE--eCCcCCCCcEEE
Q 019162 283 LDEHLVDIS--TKGITKPKEVRK 303 (345)
Q Consensus 283 ldg~~i~v~--i~~~~~~g~~~r 303 (345)
.+|+++... +|..=+.|+...
T Consensus 217 ~~G~~v~~~nViP~~w~~g~ty~ 239 (241)
T 1n10_A 217 EGGTKTEAEDVIPEGWKADTSYE 239 (241)
T ss_dssp SSSCEEEEEEEECSSCCSSEEEE
T ss_pred eCCcEEEEccccCCCCCCCCEEe
Confidence 999987665 788888888753
No 60
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=21.06 E-value=61 Score=22.02 Aligned_cols=49 Identities=10% Similarity=0.308 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH-H--HHHHHhcc-cc-cccccccc
Q 019162 39 DEQIKRAYRKLALKYHPDKNQGNEEANKRFAEI-N--NAYEVLSD-SE-TRNIYDTY 90 (345)
Q Consensus 39 ~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i-~--~Ay~~L~d-~~-~r~~yd~~ 90 (345)
.+|..+||.+|.+...=|.+=. -++..+.| . .-|-+|.| |. +++.|+.|
T Consensus 2 ~eEae~aF~~lL~~~~V~s~ws---weqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y 55 (59)
T 2b7e_A 2 AMEAEKEFITMLKENQVDSTWS---FSRIISELGTRDPRYWMVDDDPLWKKEMFEKY 55 (59)
T ss_dssp TTHHHHHHHHHHHHTTCCSSCC---HHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCCc---HHHHHHHhccCCCccccccCCHHHHHHHHHHH
Confidence 3577899999998876555432 34556666 3 48999997 54 66677765
No 61
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=21.00 E-value=50 Score=24.27 Aligned_cols=19 Identities=21% Similarity=0.658 Sum_probs=16.1
Q ss_pred EEECCCCCCHHHHHHHHHH
Q 019162 325 EVLFPTTLTEDQKTRIKEV 343 (345)
Q Consensus 325 ~v~~P~~l~~~q~~~l~~~ 343 (345)
.+.||..||+.||..+-++
T Consensus 35 ~l~FP~sLs~~eR~~IH~l 53 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQI 53 (86)
T ss_dssp EEEECTTCCSHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHH
Confidence 6889999999999887765
No 62
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=20.52 E-value=1.4e+02 Score=23.36 Aligned_cols=43 Identities=19% Similarity=0.128 Sum_probs=31.0
Q ss_pred EEEEeCCcCCCCcEEEECCCCcCCCCC---------CCCCcEEEEEEEECCC
Q 019162 288 VDISTKGITKPKEVRKFGGEGMPLHFS---------NKKGDLYITFEVLFPT 330 (345)
Q Consensus 288 i~v~i~~~~~~g~~~ri~g~G~p~~~~---------~~~GDL~v~~~v~~P~ 330 (345)
..-.||.+.++|+.+.|.|.=.+.... ....|+-++|++.|.+
T Consensus 8 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 8 HKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 455688999999999999864332221 1236999999999975
Done!