Query 019167
Match_columns 345
No_of_seqs 129 out of 227
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 11:56:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019167.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019167hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1upk_A MO25 protein; transfera 100.0 4E-132 1E-136 966.3 32.1 339 1-343 1-339 (341)
2 4hxt_A De novo protein OR329; 97.5 0.018 6.1E-07 49.6 19.8 203 75-288 38-243 (252)
3 4hxt_A De novo protein OR329; 97.2 0.033 1.1E-06 47.9 17.6 234 82-337 3-239 (252)
4 4db8_A Armadillo-repeat protei 96.9 0.012 4.2E-07 51.4 12.6 197 75-282 48-247 (252)
5 1wa5_B Importin alpha subunit; 96.7 0.074 2.5E-06 52.3 17.7 199 78-287 212-413 (530)
6 2jdq_A Importin alpha-1 subuni 96.5 0.2 6.9E-06 47.0 18.3 198 78-287 146-348 (450)
7 4db6_A Armadillo repeat protei 96.0 0.083 2.8E-06 44.8 11.9 189 84-283 15-206 (210)
8 1xqr_A HSPBP1 protein; armadil 95.6 0.68 2.3E-05 43.4 17.5 144 181-338 139-286 (296)
9 4fdd_A Transportin-1; heat rep 95.4 1.7 5.8E-05 45.2 21.2 185 84-287 93-286 (852)
10 4db6_A Armadillo repeat protei 94.8 0.51 1.7E-05 39.8 12.7 159 74-240 47-208 (210)
11 4db8_A Armadillo-repeat protei 94.8 1.8 6.1E-05 37.4 17.9 209 92-316 23-234 (252)
12 4b8j_A Importin subunit alpha- 94.4 0.99 3.4E-05 44.0 15.4 221 79-315 200-425 (528)
13 1wa5_B Importin alpha subunit; 94.4 0.32 1.1E-05 47.7 11.7 199 80-286 256-457 (530)
14 4b8j_A Importin subunit alpha- 94.0 0.5 1.7E-05 46.1 12.3 198 78-286 157-358 (528)
15 3tpo_A Importin subunit alpha- 93.8 5.5 0.00019 39.2 19.9 189 81-279 251-442 (529)
16 3ul1_B Importin subunit alpha- 93.7 4.8 0.00016 39.7 18.8 189 81-279 232-423 (510)
17 2jdq_A Importin alpha-1 subuni 93.1 1.3 4.6E-05 41.3 13.1 199 77-286 103-305 (450)
18 2bpt_A Importin beta-1 subunit 92.7 4.8 0.00017 40.9 17.6 111 172-287 184-296 (861)
19 3tpo_A Importin subunit alpha- 91.7 7.1 0.00024 38.4 17.0 198 76-281 288-492 (529)
20 4fdd_A Transportin-1; heat rep 91.1 1 3.6E-05 46.8 10.6 189 85-285 52-243 (852)
21 1ibr_B P95, importin beta-1 su 90.5 8.8 0.0003 35.6 15.5 153 126-287 126-289 (462)
22 2qk2_A LP04448P; mini spindles 90.5 3.6 0.00012 35.9 12.2 178 86-285 20-204 (242)
23 1jdh_A Beta-catenin; beta-cate 90.4 4 0.00014 39.0 13.3 111 176-289 275-388 (529)
24 3now_A UNC-45 protein, SD10334 89.5 17 0.00058 39.0 18.5 227 71-315 485-719 (810)
25 2z6g_A B-catenin; FULL-length, 89.4 12 0.0004 39.3 17.0 183 79-272 148-333 (780)
26 3ul1_B Importin subunit alpha- 88.9 8.5 0.00029 37.8 14.8 198 76-281 269-473 (510)
27 1u6g_C TIP120 protein, CAND1; 88.8 4.8 0.00017 43.6 14.0 148 82-242 49-205 (1230)
28 1jdh_A Beta-catenin; beta-cate 88.0 13 0.00044 35.4 15.0 199 79-288 15-217 (529)
29 2z6h_A Catenin beta-1, beta-ca 86.7 20 0.00069 36.0 16.2 200 78-288 11-214 (644)
30 2bpt_A Importin beta-1 subunit 86.3 30 0.001 35.0 18.4 188 82-285 225-439 (861)
31 1qgr_A Protein (importin beta 84.2 20 0.00067 36.5 14.9 189 82-286 218-437 (876)
32 2z6h_A Catenin beta-1, beta-ca 83.4 39 0.0013 33.9 18.1 197 76-287 93-293 (644)
33 2vgl_B AP-2 complex subunit be 83.3 36 0.0012 34.0 16.3 177 82-284 50-266 (591)
34 2z6g_A B-catenin; FULL-length, 82.0 52 0.0018 34.3 19.3 198 76-288 229-430 (780)
35 3grl_A General vesicular trans 80.4 62 0.0021 34.1 18.5 224 49-279 82-335 (651)
36 1b3u_A Protein (protein phosph 79.6 12 0.00042 35.8 10.8 143 170-338 444-586 (588)
37 2qk2_A LP04448P; mini spindles 78.0 2.8 9.7E-05 36.6 5.3 110 171-288 19-129 (242)
38 1ibr_B P95, importin beta-1 su 78.0 21 0.00073 33.0 11.6 186 92-285 48-245 (462)
39 1qgr_A Protein (importin beta 76.0 71 0.0024 32.3 20.7 110 172-286 177-288 (876)
40 1b3u_A Protein (protein phosph 75.8 57 0.0019 31.1 15.2 188 78-287 278-471 (588)
41 3nmw_A APC variant protein; AR 74.8 24 0.00082 33.6 11.2 163 77-246 166-339 (354)
42 1upk_A MO25 protein; transfera 74.6 52 0.0018 32.0 13.5 139 73-214 156-303 (341)
43 4hat_C Exportin-1; heat repeat 72.3 34 0.0012 37.4 12.9 174 137-329 815-1022(1023)
44 3qml_C Protein SLS1, nucleotid 72.1 9.3 0.00032 36.8 7.5 52 80-136 70-122 (315)
45 3now_A UNC-45 protein, SD10334 71.1 37 0.0013 36.4 12.7 227 75-315 530-761 (810)
46 3ltm_A Alpha-REP4; protein eng 69.9 47 0.0016 27.6 12.8 94 168-289 113-206 (211)
47 3nmz_A APC variant protein; pr 69.8 51 0.0018 32.6 12.6 162 76-244 281-453 (458)
48 1xqr_A HSPBP1 protein; armadil 66.1 45 0.0015 30.9 10.8 138 144-287 58-197 (296)
49 1w63_A Adapter-related protein 65.5 35 0.0012 34.5 10.7 72 215-295 388-461 (618)
50 2qk1_A Protein STU2; STU2P, XM 65.3 16 0.00053 32.9 7.2 181 91-283 26-217 (249)
51 2x19_B Importin-13; nuclear tr 62.8 1.5E+02 0.0051 30.8 22.4 171 127-313 725-908 (963)
52 3ltj_A Alpharep-4; protein eng 62.3 65 0.0022 26.5 13.9 86 171-284 80-165 (201)
53 3tjz_B Coatomer subunit gamma; 56.8 88 0.003 30.1 11.2 176 81-281 68-274 (355)
54 1w9c_A CRM1 protein, exportin 56.5 1E+02 0.0034 29.6 11.5 138 82-225 74-228 (321)
55 3ltj_A Alpharep-4; protein eng 54.8 87 0.003 25.7 13.2 85 169-281 109-193 (201)
56 3ltm_A Alpha-REP4; protein eng 53.6 94 0.0032 25.7 14.1 86 171-284 85-170 (211)
57 1wa5_C Importin alpha RE-expor 53.1 1.7E+02 0.0057 30.9 13.6 101 93-199 49-155 (960)
58 2f31_A Diaphanous protein homo 51.5 82 0.0028 28.0 9.5 37 101-142 74-110 (233)
59 3grl_A General vesicular trans 50.5 17 0.00059 38.2 5.4 65 216-281 126-190 (651)
60 3dad_A FH1/FH2 domain-containi 50.5 1.8E+02 0.0063 28.1 15.9 138 44-196 133-286 (339)
61 3eg5_B Protein diaphanous homo 48.6 73 0.0025 30.8 9.3 135 11-193 65-211 (383)
62 3opb_A SWI5-dependent HO expre 48.5 87 0.003 33.6 10.5 240 76-324 493-766 (778)
63 1w63_A Adapter-related protein 48.4 2.2E+02 0.0077 28.5 16.6 46 174-220 186-231 (618)
64 1u6g_C TIP120 protein, CAND1; 47.3 2.5E+02 0.0086 30.2 14.1 149 81-241 434-598 (1230)
65 3dad_A FH1/FH2 domain-containi 45.1 62 0.0021 31.4 8.0 106 177-289 128-234 (339)
66 2bnx_A Diaphanous protein homo 44.4 1E+02 0.0034 29.8 9.5 102 10-142 2-114 (386)
67 2vgl_A Adaptor protein complex 42.9 2.8E+02 0.0096 28.0 16.8 85 19-110 11-103 (621)
68 3nmz_A APC variant protein; pr 42.7 2.6E+02 0.0088 27.5 15.2 200 80-290 242-455 (458)
69 1xm9_A Plakophilin 1; armadill 40.7 91 0.0031 30.0 8.6 112 171-288 6-118 (457)
70 3gjx_A Exportin-1; transport, 37.8 4.5E+02 0.015 29.0 15.2 178 137-333 841-1046(1073)
71 3m1i_C Exportin-1; heat repeat 36.4 3.1E+02 0.01 29.3 12.6 98 138-241 816-925 (1049)
72 2vgl_A Adaptor protein complex 33.9 3.8E+02 0.013 27.0 14.5 147 168-337 405-589 (621)
73 1oyz_A Hypothetical protein YI 30.1 57 0.002 28.4 4.8 51 217-281 28-78 (280)
74 1xm9_A Plakophilin 1; armadill 30.1 2.6E+02 0.0088 26.8 9.8 130 127-266 5-136 (457)
75 2qk1_A Protein STU2; STU2P, XM 28.6 57 0.002 29.1 4.5 111 171-286 20-133 (249)
76 3nmw_A APC variant protein; AR 27.6 3.9E+02 0.013 25.1 13.4 196 80-287 126-335 (354)
77 2yru_A Steroid receptor RNA ac 27.5 1.3E+02 0.0044 24.6 6.1 45 40-84 35-79 (118)
78 3opb_A SWI5-dependent HO expre 25.8 1.8E+02 0.0062 31.2 8.4 163 95-267 124-306 (778)
79 1oyz_A Hypothetical protein YI 25.0 3.3E+02 0.011 23.4 14.2 56 216-283 163-218 (280)
80 1te4_A Conserved protein MTH18 24.5 66 0.0023 25.0 3.8 53 214-280 75-127 (131)
81 1te4_A Conserved protein MTH18 23.8 56 0.0019 25.5 3.2 54 216-283 46-99 (131)
82 2prs_A High-affinity zinc upta 21.2 2E+02 0.0067 26.1 6.8 71 11-81 122-223 (284)
83 3gi1_A LBP, laminin-binding pr 21.0 1.6E+02 0.0055 27.0 6.2 71 11-81 127-228 (286)
No 1
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=100.00 E-value=3.6e-132 Score=966.25 Aligned_cols=339 Identities=45% Similarity=0.731 Sum_probs=312.2
Q ss_pred CCccCCCCCCCCChHHHHHHHHHHHHhccccchhhHHHhHHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhh
Q 019167 1 MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKE 80 (345)
Q Consensus 1 m~~~f~~~k~~k~P~e~Vr~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~l~~mk~il~g~~e~ep~~e~~~qL~~ei~~~ 80 (345)
|+|. |++ +||||+|+||+++|+|.+|+.++. ++++.+|++|||+|+|++||.+|+|++|++|+||+|+|||+|+|++
T Consensus 1 ~~m~-F~~-~~ktP~elVr~l~d~l~~l~~~~~-~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~ 77 (341)
T 1upk_A 1 MPFP-FGK-SHKSPADIVKNLKESMAVLEKQDI-SDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNS 77 (341)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHC----CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHH
T ss_pred CCCC-CCC-CCCCHHHHHHHHHHHHHHHhcccc-ccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHh
Confidence 7888 444 599999999999999999986442 2345578999999999999999999999999999999999999999
Q ss_pred cHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcchhhhhhHHHHHHhhhhHHH
Q 019167 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLA 160 (345)
Q Consensus 81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~dial~~G~mLRecik~e~la 160 (345)
|+|++||.+||+||||+||||++||++++|+++|+++|+|+|+++||||+++|++||++||+|++||+|||||+|||++|
T Consensus 78 dll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G~mLRecir~e~la 157 (341)
T 1upk_A 78 GLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLA 157 (341)
T ss_dssp SHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHH
T ss_pred CHHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHh
Q 019167 161 RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240 (345)
Q Consensus 161 ~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelL 240 (345)
++||++++||+||+|++.|+||||||||+||||+||+||++||+||++|||+||++||+||+|+||||||||||||||||
T Consensus 158 ~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKLLgelL 237 (341)
T 1upk_A 158 KIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELL 237 (341)
T ss_dssp HHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCCCC
Q 019167 241 LEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADD 320 (345)
Q Consensus 241 ldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~~D 320 (345)
+||+|++||++||+|++|||+||+||+|+|||||+|||||||||||||+||+||++||.+||+|||+||.+|++|++ +|
T Consensus 238 ldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~-eD 316 (341)
T 1upk_A 238 LDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSKFQNDRT-ED 316 (341)
T ss_dssp HSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHHHHHHHTTTTC--CC
T ss_pred hCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCCChHHHHHHHHHHHHHHHHHHhCCCCCc-ch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997 89
Q ss_pred cccHHHHHHHHHHHhhcCCCCCC
Q 019167 321 DQFEEEKELIMKEIERVSGLPNH 343 (345)
Q Consensus 321 eqF~dEK~~lI~~I~~L~~~~~~ 343 (345)
+||.|||++||++|++||+..+.
T Consensus 317 eqF~dEK~~lI~~I~~L~~~~~~ 339 (341)
T 1upk_A 317 EQFNDEKTYLVKQIRDLKRPAQQ 339 (341)
T ss_dssp SHHHHHHHHHHHHHHTCCCCCC-
T ss_pred hhHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999877653
No 2
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.50 E-value=0.018 Score=49.63 Aligned_cols=203 Identities=14% Similarity=0.171 Sum_probs=153.0
Q ss_pred HHHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc--cCcchhhhhhHHHHH
Q 019167 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRE 152 (345)
Q Consensus 75 ~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY--~~~dial~~G~mLRe 152 (345)
..+...+.+..|+..|..=+-+.|..+..+..++.....+ ..+.+. ....+..|+.-. +++++...+-..|..
T Consensus 38 ~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~----~~~~~~-~~~~i~~l~~ll~~~~~~v~~~a~~~L~~ 112 (252)
T 4hxt_A 38 KAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE----AIKAIV-DAGGVEVLVKLLTSTDSEVQKEAARALAN 112 (252)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHH-HTTHHHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChH----HHHHHH-HCCCHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 4455678899999999888888888888888887654322 223333 223334443322 456777777777887
Q ss_pred Hh-hhhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhh
Q 019167 153 CI-KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (345)
Q Consensus 153 ci-k~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQ 231 (345)
.. ..+.....+.....+..+.+.+..++-++...|..++..+-..+......+... ..+...-.++.+++.-+++.
T Consensus 113 l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~ll~~~~~~v~~~ 189 (252)
T 4hxt_A 113 IASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA---GGVEVLVKLLTSTDSEVQKE 189 (252)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHHTTCSCHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHC---cCHHHHHHHHCCCCHHHHHH
Confidence 77 667778888888888899999999999999999999999877666555555543 46677788999999999999
Q ss_pred hhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCC
Q 019167 232 SLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANP 288 (345)
Q Consensus 232 SLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP 288 (345)
++..|+.+... +. -..+++-+..-+..++.+|++.+..+|-+|..+..-+...+
T Consensus 190 a~~~L~~l~~~--~~-~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~ 243 (252)
T 4hxt_A 190 AARALANIASG--PT-SAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGG 243 (252)
T ss_dssp HHHHHHHHTTS--BH-HHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcC--CH-HHHHHHHHCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcCC
Confidence 99999999862 33 33456667788999999999999999999998888776543
No 3
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.17 E-value=0.033 Score=47.94 Aligned_cols=234 Identities=15% Similarity=0.201 Sum_probs=163.7
Q ss_pred HHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc--cCcchhhhhhHHHHHHhhh-hH
Q 019167 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRECIKF-PS 158 (345)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY--~~~dial~~G~mLRecik~-e~ 158 (345)
.+..|+..|..=+-+.|..+.....++...... ..+.+.. ..++..|+..- +++++-..+-..|..+..+ +.
T Consensus 3 ~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~----~~~~~~~-~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 77 (252)
T 4hxt_A 3 DVEKLVKLLTSTDSETQKEAARDLAEIASGPAS----AIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE 77 (252)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHH----HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcH----HHHHHHH-CCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChH
Confidence 456677788777788888888888887665431 2233332 23344443322 2466677777777777777 88
Q ss_pred HHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHH
Q 019167 159 LARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSE 238 (345)
Q Consensus 159 la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLge 238 (345)
....+.....+..+.+.+..++-++...|..++..+-..+.......+.. ..+...-+++.+++--+++.++..|+.
T Consensus 78 ~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~~l~~~~~~~~~~a~~~L~~ 154 (252)
T 4hxt_A 78 AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA---GGVEVLVKLLTSTDSEVQKEAARALAN 154 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHC---CCHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999887666666665554 466777889999999999999999999
Q ss_pred HhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCC
Q 019167 239 FLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGA 318 (345)
Q Consensus 239 lLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~ 318 (345)
+..... -..+.+-+..-+..++.+|++++..++..|...+--+.+. ++.....+.. ...+..|-++..+
T Consensus 155 l~~~~~---~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~---~~~~~~~l~~--~~~i~~L~~ll~~--- 223 (252)
T 4hxt_A 155 IASGPD---EAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASG---PTSAIKAIVD--AGGVEVLQKLLTS--- 223 (252)
T ss_dssp HTTSCH---HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS---BHHHHHHHHH--TTHHHHHHHGGGC---
T ss_pred HHcCCH---HHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcC---CHHHHHHHHH--CCCHHHHHHHHCC---
Confidence 987433 2234555678899999999999999999999988877762 3444444443 2345555555444
Q ss_pred CCcccHHHHHHHHHHHhhc
Q 019167 319 DDDQFEEEKELIMKEIERV 337 (345)
Q Consensus 319 ~DeqF~dEK~~lI~~I~~L 337 (345)
.|+.. +......|..|
T Consensus 224 ~~~~v---~~~a~~~L~~l 239 (252)
T 4hxt_A 224 TDSEV---QKEAQRALENI 239 (252)
T ss_dssp SCHHH---HHHHHHHHHHH
T ss_pred CcHHH---HHHHHHHHHHH
Confidence 34434 44444444444
No 4
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=96.91 E-value=0.012 Score=51.35 Aligned_cols=197 Identities=15% Similarity=0.133 Sum_probs=142.9
Q ss_pred HHHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc--cCcchhhhhhHHHHH
Q 019167 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRE 152 (345)
Q Consensus 75 ~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY--~~~dial~~G~mLRe 152 (345)
..+...+.+..|+..|..=+-+.|..+..+..++.....+ ..+.+.. ...+..|+.-- +++++--.+-..|..
T Consensus 48 ~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~----~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~ 122 (252)
T 4db8_A 48 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE----QIQAVID-AGALPALVQLLSSPNEQILQEALWALSN 122 (252)
T ss_dssp HHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHH----HHHHHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3566778999999999888888888888888887653322 1223322 23344444332 345666666777777
Q ss_pred HhhhhHHH-HHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhh
Q 019167 153 CIKFPSLA-RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (345)
Q Consensus 153 cik~e~la-~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQ 231 (345)
....+... ..+.....+..+.+.++.++-++...|..++..+-............. ..+...-.+|.+++.-++..
T Consensus 123 l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~ll~~~~~~v~~~ 199 (252)
T 4db8_A 123 IASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA---GALPALVQLLSSPNEQILQE 199 (252)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---TCHHHHHHGGGCSSHHHHHH
T ss_pred hhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHC---CCHHHHHHHHCCCCHHHHHH
Confidence 77666666 777778888888999999999999999999999877665554444443 35667778999999999999
Q ss_pred hhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhh
Q 019167 232 SLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFK 282 (345)
Q Consensus 232 SLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFK 282 (345)
++..|+.+.. .+.. ....+-+..-+..++.+|++.+..+|-+|..+..
T Consensus 200 a~~~L~~l~~--~~~~-~~~~~~~~g~i~~L~~ll~~~~~~v~~~A~~~L~ 247 (252)
T 4db8_A 200 ALWALSNIAS--GGNE-QKQAVKEAGALEKLEQLQSHENEKIQKEAQEALE 247 (252)
T ss_dssp HHHHHHHHTT--SCHH-HHHHHHHTTHHHHHHTTTTCSSSHHHHTHHHHHH
T ss_pred HHHHHHHHhc--CCHH-HHHHHHHCCcHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999984 2222 2334456678899999999999999998876543
No 5
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=96.71 E-value=0.074 Score=52.27 Aligned_cols=199 Identities=9% Similarity=0.035 Sum_probs=141.3
Q ss_pred HhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhc--ccCcchhhhhhHHHHHHhh
Q 019167 78 CKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVC--YDNKEVALHCGIMLRECIK 155 (345)
Q Consensus 78 ~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~g--Y~~~dial~~G~mLRecik 155 (345)
...+.+..|+..+..-+-+.|..++..+.++.+..... +..... ..++..|+.- .+++++-..+-..|..+..
T Consensus 212 ~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~--~~~~~~---~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~ 286 (530)
T 1wa5_B 212 LQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQ--PDWSVV---SQALPTLAKLIYSMDTETLVDACWAISYLSD 286 (530)
T ss_dssp HHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSC--CCHHHH---GGGHHHHHHHTTCCCHHHHHHHHHHHHHHHS
T ss_pred HHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCC--CcHHHH---HhHHHHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 34467888888888877888999999999888754211 111111 2333333332 2345555555555665554
Q ss_pred h-hHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhh
Q 019167 156 F-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLK 234 (345)
Q Consensus 156 ~-e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLK 234 (345)
. +.....++....+..+.+.+..++-++...|..++..+.+.+......++.. .+...+-.+|.+++.-++..++.
T Consensus 287 ~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~l~~L~~lL~~~~~~vr~~A~~ 363 (530)
T 1wa5_B 287 GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINA---GVLPALRLLLSSPKENIKKEACW 363 (530)
T ss_dssp SCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHHTTCSCHHHHHHHHH
T ss_pred CCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHc---chHHHHHHHHcCCCHHHHHHHHH
Confidence 3 4455666777778888888888898999999999999887666666565554 36667788999999999999999
Q ss_pred hhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcC
Q 019167 235 LLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVAN 287 (345)
Q Consensus 235 LLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVAN 287 (345)
.||.+.. .+...+.. +-+..-+..++.+|.+.+..+|.+|...+--+...
T Consensus 364 aL~~l~~--~~~~~~~~-~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~ 413 (530)
T 1wa5_B 364 TISNITA--GNTEQIQA-VIDANLIPPLVKLLEVAEYKTKKEACWAISNASSG 413 (530)
T ss_dssp HHHHHTT--SCHHHHHH-HHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc--CCHHHHHH-HHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence 9999875 34444433 44667889999999999999999999988877764
No 6
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=96.47 E-value=0.2 Score=46.96 Aligned_cols=198 Identities=12% Similarity=0.117 Sum_probs=140.1
Q ss_pred HhhcHHHHHHhhCCC-CCchhhhhHHHHHHHHhhcc-cCCccchhHHhhhcHhHHHHHHhcc--cCcchhhhhhHHHHHH
Q 019167 78 CKEDVLILLVHKLPI-LGWEARKDLVHCWSILLKQK-VDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLREC 153 (345)
Q Consensus 78 ~~~dll~~Li~~l~~-L~fE~RKdv~~If~~llr~~-~~~~~p~v~Yl~~~peil~~Ll~gY--~~~dial~~G~mLRec 153 (345)
...+.+..|+..+.. -+-+.|+.++..+.++.+.. ...+. ..+ ..++..|+..- +++++...+...|+.+
T Consensus 146 ~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~---~~~---~~~l~~L~~~l~~~~~~v~~~a~~~L~~l 219 (450)
T 2jdq_A 146 LDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEF---AKV---SPCLNVLSWLLFVSDTDVLADACWALSYL 219 (450)
T ss_dssp HHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCG---GGT---GGGHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCH---HHH---HHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 345778889999985 67889999999999988754 22222 112 23334443322 3445555555666666
Q ss_pred hhh-hHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhh
Q 019167 154 IKF-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQS 232 (345)
Q Consensus 154 ik~-e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQS 232 (345)
..+ +.....+...+.+..+.+.+..++-++...|..++..+.+.+.......+.. .....+-++|.+++--+|+.+
T Consensus 220 ~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~l~~L~~ll~~~~~~vr~~a 296 (450)
T 2jdq_A 220 SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNC---SALQSLLHLLSSPKESIKKEA 296 (450)
T ss_dssp TSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTT---THHHHHHHHTTCSSHHHHHHH
T ss_pred HCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHC---ccHHHHHHHHcCCCHHHHHHH
Confidence 554 3445556666778888888888999999999999999887665544444433 366777889999999999999
Q ss_pred hhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcC
Q 019167 233 LKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVAN 287 (345)
Q Consensus 233 LKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVAN 287 (345)
+..||.+.. .+...+...+ +..-+..++.+|++.+..+|.+|..+.--++..
T Consensus 297 ~~~L~~l~~--~~~~~~~~~~-~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 297 CWTISNITA--GNRAQIQTVI-DANIFPALISILQTAEFRTRKEAAWAITNATSG 348 (450)
T ss_dssp HHHHHHHTT--SCHHHHHHHH-HTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc--CCHHHHHHHH-HCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcC
Confidence 999999975 3334443333 457788999999999999999999888777653
No 7
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.02 E-value=0.083 Score=44.78 Aligned_cols=189 Identities=14% Similarity=0.111 Sum_probs=131.8
Q ss_pred HHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc--cCcchhhhhhHHHHHHh-hhhHHH
Q 019167 84 ILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRECI-KFPSLA 160 (345)
Q Consensus 84 ~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY--~~~dial~~G~mLReci-k~e~la 160 (345)
..|+.-|..=+-+.|..+.....++.+...+ ..+.+.. ...+..|+..- +++++-..+-..|..+. ..+...
T Consensus 15 ~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~----~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 89 (210)
T 4db6_A 15 PQMVQQLNSPDQQELQSALRKLSQIASGGNE----QIQAVID-AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQI 89 (210)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHTSCHH----HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHcCCHH----HHHHHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHH
Confidence 3444445555667777777777776643322 1222222 13333333322 24566666666677666 456666
Q ss_pred HHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHh
Q 019167 161 RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240 (345)
Q Consensus 161 ~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelL 240 (345)
..+.....+..+.+.++.++-++...|..++..+-..........+.. ..+...-++|.+++.-+++.++..|+.+.
T Consensus 90 ~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~ll~~~~~~v~~~a~~aL~~l~ 166 (210)
T 4db6_A 90 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA---GALPALVQLLSSPNEQILQEALWALSNIA 166 (210)
T ss_dssp HHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHc---CcHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 777777788889999999999999999999999887666655555544 36777888999999999999999999999
Q ss_pred cCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhh
Q 019167 241 LEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKV 283 (345)
Q Consensus 241 ldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKv 283 (345)
.... -....+.+..-+..+..+|.+.+..+|-+|.....-
T Consensus 167 ~~~~---~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~ 206 (210)
T 4db6_A 167 SGGN---EQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEK 206 (210)
T ss_dssp TSCH---HHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred cCCc---HHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 7522 223456666788999999999999999888766543
No 8
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=95.62 E-value=0.68 Score=43.45 Aligned_cols=144 Identities=15% Similarity=0.163 Sum_probs=94.6
Q ss_pred chhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHH
Q 019167 181 FDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLK 260 (345)
Q Consensus 181 FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLk 260 (345)
=++...|..++-.+...++.....|...+ .+.-.-.+|.+++..+++.+.-+|+.+..... -..+++-+..-++
T Consensus 139 ~~v~~~A~~ALsnl~~~~~~~~~~~~~~g---gi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~---~~~~~vv~~g~i~ 212 (296)
T 1xqr_A 139 DTVRVKALFAISCLVREQEAGLLQFLRLD---GFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHP---EHKGTLCSMGMVQ 212 (296)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTT---HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCG---GGHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHCC---CHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCh---HHHHHHHHcCCHH
Confidence 34555566666665555555566777654 46677789999999999999999999987521 1245666778999
Q ss_pred HHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHH----hccCCCCCCCCcccHHHHHHHHHHHhh
Q 019167 261 VMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELL----RNLSVGKGADDDQFEEEKELIMKEIER 336 (345)
Q Consensus 261 liM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl----~~f~~d~~~~DeqF~dEK~~lI~~I~~ 336 (345)
.++.||++++..+|-.|...+--++.. .+.........+..|...| +..+. + |...+|.++..+-|+.
T Consensus 213 ~Lv~LL~~~d~~v~~~al~aL~~l~~~---~~~~~~~~~~~~~~l~~lL~~~~~~lq~-~----e~~~e~~~~~~~il~~ 284 (296)
T 1xqr_A 213 QLVALVRTEHSPFHEHVLGALCSLVTD---FPQGVRECREPELGLEELLRHRCQLLQQ-H----EEYQEELEFCEKLLQT 284 (296)
T ss_dssp HHHHHHTSCCSTHHHHHHHHHHHHHTT---CHHHHHHHHCGGGCHHHHHHHHHHHHTT-C----GGGHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHhC---ChhHHHHHhccHHHHHHHHHHHHHHccc-h----HHHHHHHHHHHHHHHH
Confidence 999999999999999999988777765 2222222111111122222 22221 1 2347888888888887
Q ss_pred cC
Q 019167 337 VS 338 (345)
Q Consensus 337 L~ 338 (345)
.=
T Consensus 285 ~f 286 (296)
T 1xqr_A 285 CF 286 (296)
T ss_dssp HC
T ss_pred Hc
Confidence 63
No 9
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=95.38 E-value=1.7 Score=45.22 Aligned_cols=185 Identities=14% Similarity=0.159 Sum_probs=121.2
Q ss_pred HHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcchhhhhhH------HHHHHhhhh
Q 019167 84 ILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGI------MLRECIKFP 157 (345)
Q Consensus 84 ~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~dial~~G~------mLRecik~e 157 (345)
..++..|..=+-..|+.++.+++.+.+.... ..-|+++..|+..-.+++.....|. +..++-..
T Consensus 93 ~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~---------~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~- 162 (852)
T 4fdd_A 93 SECLNNIGDSSPLIRATVGILITTIASKGEL---------QNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEI- 162 (852)
T ss_dssp HHHHTTTTCSSHHHHHHHHHHHHHHHHHTTT---------TTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTH-
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhcCc---------cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHH-
Confidence 3445555555556677777777777665421 2347888888887766554333332 22222111
Q ss_pred HHHHHHhc---chhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhh
Q 019167 158 SLARYILE---SASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLK 234 (345)
Q Consensus 158 ~la~~iL~---~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLK 234 (345)
+..--+. +..+-.+++.++.++-+|-.-|..++..++..+.. -+..+.+.++...-+++.+++--+|+++++
T Consensus 163 -~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~----~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~ 237 (852)
T 4fdd_A 163 -LDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQ----ALMLHIDSFIENLFALAGDEEPEVRKNVCR 237 (852)
T ss_dssp -HHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCH----HHHTSHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred -hchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccH----HHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 1100000 12344566667788888888888888776654332 244566778888888899999999999999
Q ss_pred hhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcC
Q 019167 235 LLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVAN 287 (345)
Q Consensus 235 LLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVAN 287 (345)
.|+.+... ....+..|+. .-+..++.+++|+...++.+|...+.-++..
T Consensus 238 ~L~~l~~~--~~~~~~~~l~--~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~ 286 (852)
T 4fdd_A 238 ALVMLLEV--RMDRLLPHMH--NIVEYMLQRTQDQDENVALEACEFWLTLAEQ 286 (852)
T ss_dssp HHHHHHHH--CHHHHGGGHH--HHHHHHHHHHTCSSHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHh--CHHHHHHHHH--HHHHHHHHHccCCcHHHHHHHHHHHHHHhcc
Confidence 99999873 4556666765 4677888899999999999998877766544
No 10
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=94.80 E-value=0.51 Score=39.79 Aligned_cols=159 Identities=12% Similarity=0.105 Sum_probs=113.5
Q ss_pred HHHHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhccc--CcchhhhhhHHHH
Q 019167 74 ATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLR 151 (345)
Q Consensus 74 ~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~--~~dial~~G~mLR 151 (345)
...+...+.+..|+..|..=+-+.|..+.....++...... ..+.+. ....+..|+..-+ ++++--.+-..|.
T Consensus 47 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~----~~~~i~-~~g~i~~L~~lL~~~~~~v~~~a~~~L~ 121 (210)
T 4db6_A 47 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE----QIQAVI-DAGALPALVQLLSSPNEQILQEALWALS 121 (210)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHH-HTTCHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcH----HHHHHH-HCCCHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 34566778899999999887888899988888887653322 122222 2233333333222 3455555555666
Q ss_pred HHh-hhhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehh
Q 019167 152 ECI-KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRR 230 (345)
Q Consensus 152 eci-k~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkR 230 (345)
... ..+...+.++....+..+.+.++.++-++...|..++..+...+......+...+ .+....+++.+++.-+++
T Consensus 122 ~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g---~i~~L~~ll~~~~~~v~~ 198 (210)
T 4db6_A 122 NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAG---ALEKLEQLQSHENEKIQK 198 (210)
T ss_dssp HHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTT---HHHHHHHGGGCSCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCC---CHHHHHHHHhCCCHHHHH
Confidence 554 4555666777788888999999999999999999999999886666665555543 667788899999999999
Q ss_pred hhhhhhHHHh
Q 019167 231 QSLKLLSEFL 240 (345)
Q Consensus 231 QSLKLLgelL 240 (345)
+++..|+.|-
T Consensus 199 ~a~~aL~~l~ 208 (210)
T 4db6_A 199 EAQEALEKLQ 208 (210)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 11
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.80 E-value=1.8 Score=37.36 Aligned_cols=209 Identities=14% Similarity=0.138 Sum_probs=140.9
Q ss_pred CCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhccc--CcchhhhhhHHHHHHhh-hhHHHHHHhcchh
Q 019167 92 ILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLRECIK-FPSLARYILESAS 168 (345)
Q Consensus 92 ~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~--~~dial~~G~mLRecik-~e~la~~iL~~~~ 168 (345)
.=+-+.|..+.....+++.... +..+.+.. ..++..|+.--. ++++-..+-..|..+.. .+.....+.....
T Consensus 23 s~~~~~~~~a~~~L~~~l~~~~----~~~~~~~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~ 97 (252)
T 4db8_A 23 SDDMQEQLSATRKFSQILSDGN----EQIQAVID-AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGA 97 (252)
T ss_dssp SSCSSHHHHHHHHHHHHHHHHH----HHHHHHHH-TTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTH
T ss_pred CCCHHHHHHHHHHHHHHHcCCC----chHHHHHH-cCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCC
Confidence 3355667777776655554421 12233332 234444444322 35666666677777665 5677777787778
Q ss_pred HHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHH
Q 019167 169 FELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHI 248 (345)
Q Consensus 169 f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~v 248 (345)
+..+.+.++.++-++...|..++..+-..+......+... ......-++|.+++.-+++.++..|+.+..... -
T Consensus 98 i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~---~ 171 (252)
T 4db8_A 98 LPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA---GALPALVQLLSSPNEQILQEALWALSNIASGGN---E 171 (252)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH---H
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHC---CCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCh---H
Confidence 8888899999999999999999988866554433444444 355677789999999999999999999986432 2
Q ss_pred HHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCC
Q 019167 249 MKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGK 316 (345)
Q Consensus 249 M~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~ 316 (345)
....+.+..-+..++.+|++++..++..|..+.--++.. ++.....+.. ...+.-|-+...+.
T Consensus 172 ~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~---~~~~~~~~~~--~g~i~~L~~ll~~~ 234 (252)
T 4db8_A 172 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG---GNEQKQAVKE--AGALEKLEQLQSHE 234 (252)
T ss_dssp HHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTS---CHHHHHHHHH--TTHHHHHHTTTTCS
T ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcC---CHHHHHHHHH--CCcHHHHHHHhCCC
Confidence 234455677899999999999999999999988877742 3333444432 24566666666553
No 12
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=94.43 E-value=0.99 Score=43.97 Aligned_cols=221 Identities=14% Similarity=0.120 Sum_probs=148.1
Q ss_pred hhcHHHHHHhhC-CCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhc--ccCcchhhhhhHHHHHHhh
Q 019167 79 KEDVLILLVHKL-PILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVC--YDNKEVALHCGIMLRECIK 155 (345)
Q Consensus 79 ~~dll~~Li~~l-~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~g--Y~~~dial~~G~mLRecik 155 (345)
..+.+..|+..| ..-+.+.+..++..+.++.+....... ... ..++..|+.. -.++++...+-..|..+..
T Consensus 200 ~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~---~~~---~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~ 273 (528)
T 4b8j_A 200 ANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSF---EQT---RPALPALARLIHSNDEEVLTDACWALSYLSD 273 (528)
T ss_dssp HTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCH---HHH---TTHHHHHHHHTTCCCHHHHHHHHHHHHHHTS
T ss_pred HCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcH---HHH---HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHc
Confidence 345778888888 667788899999999998876532221 111 3334444332 2345555555555555444
Q ss_pred h-hHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCC-Cceehhhhh
Q 019167 156 F-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSS-NYVTRRQSL 233 (345)
Q Consensus 156 ~-e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~-NYVTkRQSL 233 (345)
+ +.....++....+..+...+..++-++...|..++..+.+.........+.. .....+-.+|.++ +--+++.+.
T Consensus 274 ~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~---~~l~~L~~lL~~~~~~~v~~~A~ 350 (528)
T 4b8j_A 274 GTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDH---QALPCLLSLLTQNLKKSIKKEAC 350 (528)
T ss_dssp SCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTT---THHHHHHHHHHSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHh---hhHHHHHHHHcCCCcHHHHHHHH
Confidence 3 3344566666778888888888888999999999999887666555555543 3566777888898 999999999
Q ss_pred hhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccC
Q 019167 234 KLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLS 313 (345)
Q Consensus 234 KLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~ 313 (345)
..|+.|... +... ..++-+..-+..++.+|.+....++-+|...+.-++.+. +++....|.. ...+..|-+..
T Consensus 351 ~~L~nl~~~--~~~~-~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~--~~~~~~~l~~--~~~i~~L~~lL 423 (528)
T 4b8j_A 351 WTISNITAG--NKDQ-IQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGG--SHDQIKYLVS--EGCIKPLCDLL 423 (528)
T ss_dssp HHHHHHHTS--CHHH-HHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHS--CHHHHHHHHH--TTCHHHHHHGG
T ss_pred HHHHHHHCC--CHHH-HHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCC--CHHHHHHHHH--CCCHHHHHHHH
Confidence 999999862 3333 334445577899999999998899999999888776652 2333444432 23444444444
Q ss_pred CC
Q 019167 314 VG 315 (345)
Q Consensus 314 ~d 315 (345)
.+
T Consensus 424 ~~ 425 (528)
T 4b8j_A 424 IC 425 (528)
T ss_dssp GC
T ss_pred cC
Confidence 43
No 13
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=94.35 E-value=0.32 Score=47.73 Aligned_cols=199 Identities=13% Similarity=0.127 Sum_probs=136.3
Q ss_pred hcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc--cCcchhhhhhHHHHHHhh-h
Q 019167 80 EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRECIK-F 156 (345)
Q Consensus 80 ~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY--~~~dial~~G~mLRecik-~ 156 (345)
.+++..|+..+..=+-+.|..+..++.++..... ...+.+.. ..++..|+..- .++++-..+-..|..+.. .
T Consensus 256 ~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~----~~~~~~~~-~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~ 330 (530)
T 1wa5_B 256 SQALPTLAKLIYSMDTETLVDACWAISYLSDGPQ----EAIQAVID-VRIPKRLVELLSHESTLVQTPALRAVGNIVTGN 330 (530)
T ss_dssp GGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCH----HHHHHHHH-TTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCH----HHHHHHHh-cCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCC
Confidence 3577778888877777777777777777664321 12233322 23333443332 234455555555555543 4
Q ss_pred hHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhh
Q 019167 157 PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLL 236 (345)
Q Consensus 157 e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLL 236 (345)
+.....++....+..+.++++.++.+|...|..++..+-......+..++.. .++..+-.+|.++++-+++.++..|
T Consensus 331 ~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~---~~l~~L~~lL~~~~~~v~~~a~~aL 407 (530)
T 1wa5_B 331 DLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDA---NLIPPLVKLLEVAEYKTKKEACWAI 407 (530)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---TCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHC---CCHHHHHHHHhcCCHHHHHHHHHHH
Confidence 5666677777778888899999999999999999998776555555555543 3566677788899999999999999
Q ss_pred HHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhc
Q 019167 237 SEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVA 286 (345)
Q Consensus 237 gelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVA 286 (345)
+.+...-....-..+|+-+..-+..+..+|.++...++..|...+.-++.
T Consensus 408 ~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~~al~aL~~l~~ 457 (530)
T 1wa5_B 408 SNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILK 457 (530)
T ss_dssp HHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 99987532100123455567789999999999999999998888876654
No 14
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=94.01 E-value=0.5 Score=46.06 Aligned_cols=198 Identities=12% Similarity=0.115 Sum_probs=130.3
Q ss_pred HhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc---cCcchhhhhhHHHHHHh
Q 019167 78 CKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECI 154 (345)
Q Consensus 78 ~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY---~~~dial~~G~mLReci 154 (345)
...+.+..|+..|..=+-+.|..++..+.++...... ..+.+.. ..++..|+..- .++++.-.+-..|..+.
T Consensus 157 ~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~----~~~~i~~-~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~ 231 (528)
T 4b8j_A 157 IDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPK----CRDLVLA-NGALLPLLAQLNEHTKLSMLRNATWTLSNFC 231 (528)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHH----HHHHHHH-TTCHHHHHHTCCTTCCHHHHHHHHHHHHHHH
T ss_pred HhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChh----hHHHHHH-CCcHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 3346788888888876777888888888777643221 1223332 23344444332 34444444444555544
Q ss_pred hhhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhh
Q 019167 155 KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLK 234 (345)
Q Consensus 155 k~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLK 234 (345)
.+.+-.......+.+..+.+.+..++=++..+|..++..+-......+...+.. ..+...-.+|.+++--++..++.
T Consensus 232 ~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~---g~v~~Lv~lL~~~~~~v~~~a~~ 308 (528)
T 4b8j_A 232 RGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEA---GVCPRLVELLLHPSPSVLIPALR 308 (528)
T ss_dssp CSSSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHT---TCHHHHHHHTTCSCHHHHHHHHH
T ss_pred cCCCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHc---CHHHHHHHHHcCCChhHHHHHHH
Confidence 442222222334566677777788888888999988888766554444444433 35566778999999899999999
Q ss_pred hhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCC-cccchhhhhhhhhhhhc
Q 019167 235 LLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDS-SKNIQISAFHIFKVFVA 286 (345)
Q Consensus 235 LLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~-sk~Iq~EAFhvFKvFVA 286 (345)
.||.|... + .-....+-+..-+..++.+|++. +..++.+|..+.--+.+
T Consensus 309 ~L~nl~~~--~-~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~ 358 (528)
T 4b8j_A 309 TVGNIVTG--D-DAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITA 358 (528)
T ss_dssp HHHHHTTS--C-HHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC--C-HHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHC
Confidence 99999862 2 23344455677899999999999 88999999988877766
No 15
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=93.84 E-value=5.5 Score=39.23 Aligned_cols=189 Identities=11% Similarity=0.163 Sum_probs=123.5
Q ss_pred cHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHh--cccCcchhhhhhHHHHHHhh-hh
Q 019167 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVV--CYDNKEVALHCGIMLRECIK-FP 157 (345)
Q Consensus 81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~--gY~~~dial~~G~mLRecik-~e 157 (345)
+.+..|+..+..=+-+.+.++....+++.....+ ..+.+. ...++..|+. +..++.+...+-..|+.++. .+
T Consensus 251 ~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~----~~~~v~-~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~ 325 (529)
T 3tpo_A 251 QILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE----RIEMVV-KKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD 325 (529)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHH----HHHHHH-TTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred hHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhh----hHHHHH-hccchHHHHHHhcCCChhHHHHHHHHHHHHHccch
Confidence 3556666666666666777766666655432211 111111 1112222222 12344555555555665544 45
Q ss_pred HHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhH
Q 019167 158 SLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLS 237 (345)
Q Consensus 158 ~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLg 237 (345)
.....++....+..+...+..++=+|-..|..++.-+-..++......+..+ .+...-.+|.++++-+++.+...|+
T Consensus 326 ~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g---~i~~Lv~lL~~~~~~v~~~A~~aL~ 402 (529)
T 3tpo_A 326 EQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHG---LVPFLVGVLSKADFKTQKAAAWAIT 402 (529)
T ss_dssp HHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTT---HHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcC---cHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 5666777777777777888889999999999999888776666555555544 5667778999999999999999999
Q ss_pred HHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhh
Q 019167 238 EFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFH 279 (345)
Q Consensus 238 elLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFh 279 (345)
.+........ .+|+-+..-++.++.||+++...++.-+-.
T Consensus 403 nl~~~~~~~~--~~~l~~~g~i~~L~~LL~~~d~~i~~~~L~ 442 (529)
T 3tpo_A 403 NYTSGGTVEQ--IVYLVHCGIIEPLMNLLSAKDTKIIQVILD 442 (529)
T ss_dssp HHHHHSCHHH--HHHHHHTTCHHHHHHGGGCSCHHHHHHHHH
T ss_pred HHHcCCCHHH--HHHHHHCcCHHHHHHHhcCCCHHHHHHHHH
Confidence 9987554433 357777788999999999888777655543
No 16
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=93.66 E-value=4.8 Score=39.66 Aligned_cols=189 Identities=11% Similarity=0.158 Sum_probs=123.6
Q ss_pred cHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHh--cccCcchhhhhhHHHHHH-hhhh
Q 019167 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVV--CYDNKEVALHCGIMLREC-IKFP 157 (345)
Q Consensus 81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~--gY~~~dial~~G~mLRec-ik~e 157 (345)
+.+..|+..+..=+-+.+.++....+++.....+ ..+.+. ...++..|+. +..++.+-..+-..|..+ ...+
T Consensus 232 ~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~----~~~~i~-~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~ 306 (510)
T 3ul1_B 232 QILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE----RIEMVV-KKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD 306 (510)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHH----HHHHHH-TTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhh----hHHHHH-hcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCH
Confidence 3556666666666666677766666665432211 111111 1112222222 123444444444455543 3456
Q ss_pred HHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhH
Q 019167 158 SLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLS 237 (345)
Q Consensus 158 ~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLg 237 (345)
..+..++....+..+...+..++=+|-..|..++..+...........+..+ .+...-.++.++++-+|+.+...|+
T Consensus 307 ~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g---~i~~Lv~lL~~~~~~v~~~Aa~aL~ 383 (510)
T 3ul1_B 307 EQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHG---LVPFLVGVLSKADFKTQKEAAWAIT 383 (510)
T ss_dssp HHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcC---CHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6677777777777788888899999999999999988776666555555544 5667778999999999999999999
Q ss_pred HHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhh
Q 019167 238 EFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFH 279 (345)
Q Consensus 238 elLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFh 279 (345)
.+........ ..|+-+..-++.++.||+++...|+.-+-.
T Consensus 384 Nl~~~~~~~~--~~~L~~~g~i~~L~~LL~~~d~~i~~~~L~ 423 (510)
T 3ul1_B 384 NYTSGGTVEQ--IVYLVHCGIIEPLMNLLSAKDTKIIQVILD 423 (510)
T ss_dssp HHHHHCCHHH--HHHHHHTTCHHHHHHGGGCSCHHHHHHHHH
T ss_pred HHHccCCHHH--HHHHHHCCCHHHHHHHhcCCCHHHHHHHHH
Confidence 9987544333 357777888999999999988777665544
No 17
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=93.06 E-value=1.3 Score=41.29 Aligned_cols=199 Identities=14% Similarity=0.162 Sum_probs=126.8
Q ss_pred HHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc---cCcchhhhhhHHHHHH
Q 019167 77 VCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLREC 153 (345)
Q Consensus 77 i~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY---~~~dial~~G~mLRec 153 (345)
+...+.+..|+..+..=+-+.|..+...+.++...... ..+.+. ...++..|+.-- .++++...+-..|...
T Consensus 103 ~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~----~~~~~~-~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l 177 (450)
T 2jdq_A 103 VIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTM----CRDYVL-DCNILPPLLQLFSKQNRLTMTRNAVWALSNL 177 (450)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHH----HHHHHH-HTTCHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHH----HHHHHH-HCCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 34467889999999887788888888888887654321 122222 123333333322 2344444444444444
Q ss_pred hhhh-HHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhh
Q 019167 154 IKFP-SLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQS 232 (345)
Q Consensus 154 ik~e-~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQS 232 (345)
.++. +-.+..+..+.+..+.+.+..++=++..+|..++..+-............. ..+..+-++|.+++.-++..+
T Consensus 178 ~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~ll~~~~~~v~~~a 254 (450)
T 2jdq_A 178 CRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDA---GVCRRLVELLMHNDYKVVSPA 254 (450)
T ss_dssp HCCSSSCCCGGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHT---TTHHHHHHHTTCSCHHHHHHH
T ss_pred hCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHc---CcHHHHHHHHCCCchhHHHHH
Confidence 4332 111111113455566666677777788888888888765444433333332 345666778899999999999
Q ss_pred hhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhc
Q 019167 233 LKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVA 286 (345)
Q Consensus 233 LKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVA 286 (345)
+..||.+..... -..+.+-+..-+..++.+|.+++..++.+|....--+.+
T Consensus 255 ~~~L~~l~~~~~---~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~ 305 (450)
T 2jdq_A 255 LRAVGNIVTGDD---IQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITA 305 (450)
T ss_dssp HHHHHHHTTSCH---HHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhCCh---HHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 999999986433 234455566789999999999999999999988877765
No 18
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=92.71 E-value=4.8 Score=40.90 Aligned_cols=111 Identities=8% Similarity=0.122 Sum_probs=71.3
Q ss_pred hhhhccCC--CchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHH
Q 019167 172 FFKFVELP--TFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIM 249 (345)
Q Consensus 172 fF~y~~~~--~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM 249 (345)
+...+..+ +-+|-..|...+..++..-..-.... ...+.+......++.+++.-.|+.+++.|+++..... ..+
T Consensus 184 l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~--~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~--~~~ 259 (861)
T 2bpt_A 184 IVQGAQSTETSKAVRLAALNALADSLIFIKNNMERE--GERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYY--TFM 259 (861)
T ss_dssp HHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSH--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHG--GGC
T ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHccCh--hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH--HHH
Confidence 34444555 67777777777776643111000000 0012355555678889999999999999999986322 223
Q ss_pred HHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcC
Q 019167 250 KRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVAN 287 (345)
Q Consensus 250 ~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVAN 287 (345)
..|+.. .-+.+++..+.|....++..|+..+.-++..
T Consensus 260 ~~~l~~-~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~ 296 (861)
T 2bpt_A 260 KPYMEQ-ALYALTIATMKSPNDKVASMTVEFWSTICEE 296 (861)
T ss_dssp HHHHHH-THHHHHHHHTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 334431 4566788889999999999999999877764
No 19
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=91.70 E-value=7.1 Score=38.45 Aligned_cols=198 Identities=9% Similarity=0.097 Sum_probs=120.0
Q ss_pred HHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhh--cHhHHHHHHhcccCcchhhhhhHHHHH-
Q 019167 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN--HFELLDFLVVCYDNKEVALHCGIMLRE- 152 (345)
Q Consensus 76 ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~--~peil~~Ll~gY~~~dial~~G~mLRe- 152 (345)
.+...+.+..|+..|..=+.+.+..+.....++...... ....+.. --..+..|+.. .++++--.+...|..
T Consensus 288 ~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~----~~~~i~~~g~l~~L~~LL~~-~~~~i~~~a~~aL~nl 362 (529)
T 3tpo_A 288 MVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE----QTQKVIDAGALAVFPSLLTN-PKTNIQKEATWTMSNI 362 (529)
T ss_dssp HHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHHTTGGGGHHHHTTC-SSHHHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchH----HHHHHhhcccHHHHHHHHcC-CCHHHHHHHHHHHHHH
Confidence 455677888888888887777888888777776543211 1122221 11222233332 223333333333333
Q ss_pred HhhhhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcC-hhhHHHHHHhhHHHHHHHHHhhhcCCCceehhh
Q 019167 153 CIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKH-LTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (345)
Q Consensus 153 cik~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~H-k~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQ 231 (345)
|...+.....+.....+..+...+..+++++-..|..++.-+.... ...+...... ..+.-+-.||.+++-=+.+.
T Consensus 363 ~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~---g~i~~L~~LL~~~d~~i~~~ 439 (529)
T 3tpo_A 363 TAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHC---GIIEPLMNLLSAKDTKIIQV 439 (529)
T ss_dssp HTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT---TCHHHHHHGGGCSCHHHHHH
T ss_pred hcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHC---cCHHHHHHHhcCCCHHHHHH
Confidence 4445666667777778888889999999999999988887775532 2222222222 24555667888888888888
Q ss_pred hhhhhHHHhc---CCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhh
Q 019167 232 SLKLLSEFLL---EPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIF 281 (345)
Q Consensus 232 SLKLLgelLl---dr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvF 281 (345)
+|.-|..|+- .-.+.+-+..+|....-+..+-.|..+++..|+--|+.+.
T Consensus 440 ~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~~A~~ii 492 (529)
T 3tpo_A 440 ILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLI 492 (529)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8888887763 2233444555666666666666666666666665555443
No 20
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=91.06 E-value=1 Score=46.82 Aligned_cols=189 Identities=9% Similarity=0.134 Sum_probs=118.1
Q ss_pred HHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhccc--CcchhhhhhHHHHHHhhhhHHHHH
Q 019167 85 LLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLRECIKFPSLARY 162 (345)
Q Consensus 85 ~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~--~~dial~~G~mLRecik~e~la~~ 162 (345)
.++..+..-+-+.|.-++..+.+.+++.-.. .| . ..+..|-..|+.+-. ++.+-..++..+.+.++++....
T Consensus 52 ~il~~~~~~~~~vR~~a~~~Lkn~i~~~w~~-~~-~---~~~~~ik~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~~- 125 (852)
T 4fdd_A 52 FVLTKLKSEDEPTRSLSGLILKNNVKAHFQN-FP-N---GVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQN- 125 (852)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHHTTTSGGG-CC-H---HHHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHTTTTT-
T ss_pred HHHhccCCCChHHHHHHHHHHHHHHHHccCC-CC-H---HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCccc-
Confidence 3444555667788888888887777543211 11 0 113444555555443 34556666666666666542110
Q ss_pred HhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHH-HHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhc
Q 019167 163 ILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVS-EYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLL 241 (345)
Q Consensus 163 iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lva-efl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLl 241 (345)
..+.+-.+++.++.++..+---|+.++..+......... +.+....+.++..+.+++.+++--.|..+++-|+.++.
T Consensus 126 --wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~ 203 (852)
T 4fdd_A 126 --WPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFII 203 (852)
T ss_dssp --CTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTT
T ss_pred --cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Confidence 122344566777888777777777777777654333211 12223356777788888999999999999999998885
Q ss_pred CCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhh
Q 019167 242 EPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFV 285 (345)
Q Consensus 242 dr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFV 285 (345)
... ..+..++ ++.+..+..++.|++..++-.|+..+--++
T Consensus 204 ~~~--~~~~~~~--~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~ 243 (852)
T 4fdd_A 204 SRT--QALMLHI--DSFIENLFALAGDEEPEVRKNVCRALVMLL 243 (852)
T ss_dssp TTC--HHHHTSH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred ccc--HHHHHHH--HHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 433 2222222 467788888999999899998888776544
No 21
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=90.51 E-value=8.8 Score=35.61 Aligned_cols=153 Identities=10% Similarity=0.096 Sum_probs=85.6
Q ss_pred cHhHHHHHHhcccCc--chhh------hhhHHHHHHhhhhHHHHHHhcchhHHHhhhhccCC--CchhhhhhHHHHHHhh
Q 019167 126 HFELLDFLVVCYDNK--EVAL------HCGIMLRECIKFPSLARYILESASFELFFKFVELP--TFDVASDAFSTFKDLL 195 (345)
Q Consensus 126 ~peil~~Ll~gY~~~--dial------~~G~mLRecik~e~la~~iL~~~~f~~fF~y~~~~--~FeiasDAf~Tfkell 195 (345)
-|+++..|+....++ +... ..|.+..++ +.+.+..++ .+.+..+...++.+ +=+|-.-|..++..++
T Consensus 126 w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~-~~~~~~~~~--~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 202 (462)
T 1ibr_B 126 WPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDI-DPEQLQDKS--NEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (462)
T ss_dssp CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS-CGGGTGGGH--HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhC-CchhhHhHH--HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 478888888776554 3222 222222222 111111100 12333444555555 5667666777776654
Q ss_pred hcChhhHHHHHHhhHHH-HHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccch
Q 019167 196 TKHLTVVSEYLTAHYDE-FFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQ 274 (345)
Q Consensus 196 t~Hk~lvaefl~~Nyd~-Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq 274 (345)
.--+....... +.. +......++.+++--.|+.+++.|+.+..... ..+..|+.. .-+..++..++|....++
T Consensus 203 ~~~~~~~~~~~---~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~--~~~~~~~~~-~l~~~~~~~~~~~~~~v~ 276 (462)
T 1ibr_B 203 EFTKANFDKES---ERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY--QYMETYMGP-ALFAITIEAMKSDIDEVA 276 (462)
T ss_dssp TTTHHHHTSHH---HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCG--GGCTTTTTT-THHHHHHHHHHCSSHHHH
T ss_pred HHHHHhhhhhH---HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHH-HHHHHHHHHHcCCchHHH
Confidence 21110000000 111 23444467788888899999999999986432 233344442 456677788899999999
Q ss_pred hhhhhhhhhhhcC
Q 019167 275 ISAFHIFKVFVAN 287 (345)
Q Consensus 275 ~EAFhvFKvFVAN 287 (345)
..|+..+.-++..
T Consensus 277 ~~a~~~l~~~~~~ 289 (462)
T 1ibr_B 277 LQGIEFWSNVCDE 289 (462)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999987776643
No 22
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=90.48 E-value=3.6 Score=35.92 Aligned_cols=178 Identities=12% Similarity=0.152 Sum_probs=114.3
Q ss_pred HHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhccc-Ccchhh------hhhHHHHHHhhhhH
Q 019167 86 LVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD-NKEVAL------HCGIMLRECIKFPS 158 (345)
Q Consensus 86 Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~-~~dial------~~G~mLRecik~e~ 158 (345)
+...+..=+|..|+.+..-+..++....+ .... ...+++..|...-. +++... ..|.+.+.. +. .
T Consensus 20 l~~~l~s~~w~~R~~a~~~L~~l~~~~~~--~~~~----~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l-~~-~ 91 (242)
T 2qk2_A 20 FYDKLEEKKWTLRKESLEVLEKLLTDHPK--LENG----EYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGL-AK-R 91 (242)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHCSS--BCCC----CCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH-GG-G
T ss_pred HHhhhccCCHHHHHHHHHHHHHHHccCCC--CCCC----CHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH-hh-h
Confidence 34445667889999988888887765221 1111 12466666666553 443322 223332211 11 0
Q ss_pred HHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHH
Q 019167 159 LARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSE 238 (345)
Q Consensus 159 la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLge 238 (345)
+..++ ...+-.+++.+..++=.|..-|..++..+.... +++.+...+...|.+.|.-+|..++.+|+.
T Consensus 92 ~~~~~--~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~----------~~~~ll~~l~~~l~~~~~~vr~~~l~~l~~ 159 (242)
T 2qk2_A 92 FSNYA--SACVPSLLEKFKEKKPNVVTALREAIDAIYAST----------SLEAQQESIVESLSNKNPSVKSETALFIAR 159 (242)
T ss_dssp GHHHH--HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS----------CHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC----------CHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 11110 112334555566777778888888888876532 467788888888999999999999999999
Q ss_pred HhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhh
Q 019167 239 FLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFV 285 (345)
Q Consensus 239 lLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFV 285 (345)
++..-.....+..|+ +.-+..++.+|.|+...++-.|+..+-.+.
T Consensus 160 ~l~~~~~~~~~~~~l--~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~ 204 (242)
T 2qk2_A 160 ALTRTQPTALNKKLL--KLLTTSLVKTLNEPDPTVRDSSAEALGTLI 204 (242)
T ss_dssp HHTTCCGGGCCHHHH--HHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCccHHHH--HHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Confidence 886533333455666 467888999999999999999988776544
No 23
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=90.36 E-value=4 Score=39.02 Aligned_cols=111 Identities=9% Similarity=0.054 Sum_probs=66.8
Q ss_pred ccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcC--CCceehhhhhhhhHHHhcCCCCHHHHHHHh
Q 019167 176 VELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTS--SNYVTRRQSLKLLSEFLLEPPNSHIMKRYI 253 (345)
Q Consensus 176 ~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s--~NYVTkRQSLKLLgelLldr~N~~vM~~Yi 253 (345)
+..++-++...|..++..+-..+......+.... -...+-++|.+ ++--++..++..|+.|-.+..........+
T Consensus 275 l~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~---~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i 351 (529)
T 1jdh_A 275 LGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVG---GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAV 351 (529)
T ss_dssp TTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcC---ChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 3344444444555555444332222333333222 34455566654 335788999999999976533333233344
Q ss_pred cchhhHHHHHHHhcCCcc-cchhhhhhhhhhhhcCCC
Q 019167 254 LEVRFLKVMMTLLKDSSK-NIQISAFHIFKVFVANPN 289 (345)
Q Consensus 254 ~~~~NLkliM~LL~d~sk-~Iq~EAFhvFKvFVANP~ 289 (345)
-+..-+..++.+|++++. .++.+|-.+..-+.++|.
T Consensus 352 ~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~ 388 (529)
T 1jdh_A 352 RLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPA 388 (529)
T ss_dssp HHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGG
T ss_pred HHcCChhHHHHHhccccchHHHHHHHHHHHHHhcChh
Confidence 455668999999999885 899999888777776654
No 24
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=89.50 E-value=17 Score=39.05 Aligned_cols=227 Identities=9% Similarity=0.068 Sum_probs=138.0
Q ss_pred HHHHHHHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhc---HhHHHHHHhcccCcchhhhhh
Q 019167 71 LQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH---FELLDFLVVCYDNKEVALHCG 147 (345)
Q Consensus 71 ~qL~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~---peil~~Ll~gY~~~dial~~G 147 (345)
..-++.+...+.+..|+..+..=+-+.|+.++.+..++-... ...+.+..+ |-++..|-.|.... --.-+.
T Consensus 485 ~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~-----~~r~~Vv~~Gaip~Lv~LL~s~~~~~-k~~Aa~ 558 (810)
T 3now_A 485 NKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLK-----ELRGKVVQEGGVKALLRMALEGTEKG-KRHATQ 558 (810)
T ss_dssp HHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSH-----HHHHHHHHTTHHHHHHHHHHSSCHHH-HHHHHH
T ss_pred HHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----HHHHHHHHCCCHHHHHHHHccCCHHH-HHHHHH
Confidence 333478888999999999999888889999999998875432 234555543 55555555553211 011122
Q ss_pred HHHHHHhhhhHHHHHHhc----chhHHHhhhhccCCCc-hhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhc
Q 019167 148 IMLRECIKFPSLARYILE----SASFELFFKFVELPTF-DVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLT 222 (345)
Q Consensus 148 ~mLRecik~e~la~~iL~----~~~f~~fF~y~~~~~F-eiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~ 222 (345)
.+-+-|+-..+ ..++. .+.+-.+.+.+..+.- ....+|...+.-|.+.........+.. ..+..+-.||.
T Consensus 559 AL~nL~~~~~p--~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~a---G~l~~Lv~LL~ 633 (810)
T 3now_A 559 ALARIGITINP--EVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKE---QGVSKIEYYLM 633 (810)
T ss_dssp HHHHHHHHSCH--HHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHHHH
T ss_pred HHHHHhcCCCh--hhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHc---CCHHHHHHHHc
Confidence 22222221111 00110 0123334444443322 222466666766665444444444443 35778888999
Q ss_pred CCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhH
Q 019167 223 SSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNH 302 (345)
Q Consensus 223 s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr 302 (345)
|+|--.++.|+.+|+.|...+ ....+++.+..-++.+..||.+.+..+|-+|--.+--..+. ++...+-+..+
T Consensus 634 s~~~~Vq~~A~~~L~NLa~~~---~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~---s~~~~~~ii~~- 706 (810)
T 3now_A 634 EDHLYLTRAAAQCLCNLVMSE---DVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSV---SVKCCEKILAI- 706 (810)
T ss_dssp SCCTTHHHHHHHHHHHHTTSH---HHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH---CHHHHHHHHTS-
T ss_pred CCCHHHHHHHHHHHHHHhCCh---HHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCC---CHHHHHHHHHH-
Confidence 999999999999999999744 46677886678999999999999999999998776666652 22222333332
Q ss_pred HHHHHHHhccCCC
Q 019167 303 EKLLELLRNLSVG 315 (345)
Q Consensus 303 ~kLl~fl~~f~~d 315 (345)
...+..|-++..+
T Consensus 707 ~g~I~~Lv~LL~s 719 (810)
T 3now_A 707 ASWLDILHTLIAN 719 (810)
T ss_dssp TTHHHHHHHHHTC
T ss_pred cCCHHHHHHHHCC
Confidence 3444455554443
No 25
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=89.42 E-value=12 Score=39.25 Aligned_cols=183 Identities=13% Similarity=0.023 Sum_probs=126.9
Q ss_pred hhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc---cCcchhhhhhHHHHHHhh
Q 019167 79 KEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECIK 155 (345)
Q Consensus 79 ~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY---~~~dial~~G~mLRecik 155 (345)
..+.+..|+..|..=+-+.|..++....++-.... ...-+...++++..|++.- +++++-..+-..|+.+.+
T Consensus 148 ~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~-----~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~ 222 (780)
T 2z6g_A 148 ATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-----SRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSH 222 (780)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHH-----HHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT
T ss_pred HhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCCh-----hHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhC
Confidence 35667777777766567778888877777655321 1223334677777766543 367788888888999888
Q ss_pred hhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhh
Q 019167 156 FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKL 235 (345)
Q Consensus 156 ~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKL 235 (345)
.+.-...+.....+..+.+.++.++=++-..|..++..+-..+......+...+ .+..+-++|.++|--.++.++..
T Consensus 223 ~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g---~v~~Lv~lL~~~~~~v~~~a~~a 299 (780)
T 2z6g_A 223 HREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAG---GLQKMVALLNKTNVKFLAITTDC 299 (780)
T ss_dssp SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---HHHHHHHGGGCCCHHHHHHHHHH
T ss_pred CchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcC---CHHHHHHHHhcCCHHHHHHHHHH
Confidence 877766777777888899999999888999999999988765443333333222 45567788988887777888888
Q ss_pred hHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCccc
Q 019167 236 LSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKN 272 (345)
Q Consensus 236 LgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~ 272 (345)
|+.+-. .|-......++. ..+..++.+|++.+..
T Consensus 300 L~~La~--~~~e~~~~i~~~-~~i~~Lv~lL~~~~~~ 333 (780)
T 2z6g_A 300 LQILAY--GNQESKLIILAS-GGPQALVNIMRTYTYE 333 (780)
T ss_dssp HHHHHT--TCHHHHHHHHTT-THHHHHHHHHTTCCCH
T ss_pred HHHHhc--CChHHHHHHHHc-CCHHHHHHHHhcCCHH
Confidence 885554 455555444444 6688888888877543
No 26
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=88.88 E-value=8.5 Score=37.82 Aligned_cols=198 Identities=9% Similarity=0.083 Sum_probs=121.1
Q ss_pred HHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc--cCcchhhhhhHHHHH-
Q 019167 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRE- 152 (345)
Q Consensus 76 ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY--~~~dial~~G~mLRe- 152 (345)
.+...+.+..|+..|..=+-+.+..+.....++...... ....+.. ..++..|+.-. .++++--.+-..|..
T Consensus 269 ~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~----~~~~i~~-~g~l~~L~~LL~~~~~~v~~~A~~aL~nl 343 (510)
T 3ul1_B 269 MVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE----QTQKVID-AGALAVFPSLLTNPKTNIQKEATWTMSNI 343 (510)
T ss_dssp HHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTGGGGCC-CTTCSSHHHHHHHHHHHHHH
T ss_pred HHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHH----HHHHHhh-ccchHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 445667888888888887777777777777776543211 1111111 11111111111 122332233333333
Q ss_pred HhhhhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcCh-hhHHHHHHhhHHHHHHHHHhhhcCCCceehhh
Q 019167 153 CIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHL-TVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (345)
Q Consensus 153 cik~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk-~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQ 231 (345)
|...+.....+.....+..+.+.+..+++++-..|..++.-+..... ..+...... ..+..+-.||.+++-=+.+.
T Consensus 344 ~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~---g~i~~L~~LL~~~d~~i~~~ 420 (510)
T 3ul1_B 344 TAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC---GIIEPLMNLLSAKDTKIIQV 420 (510)
T ss_dssp TTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHT---TCHHHHHHGGGCSCHHHHHH
T ss_pred HcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHC---CCHHHHHHHhcCCCHHHHHH
Confidence 33455566667777788888999999999999999888887765322 222222222 24555667888888888888
Q ss_pred hhhhhHHHhc---CCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhh
Q 019167 232 SLKLLSEFLL---EPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIF 281 (345)
Q Consensus 232 SLKLLgelLl---dr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvF 281 (345)
+|..|..|+- .-...+-+.++|....-+..+=.|..+++..|+--|+.+.
T Consensus 421 ~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~~A~~ii 473 (510)
T 3ul1_B 421 ILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLI 473 (510)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8888888773 2233455566677777777777777777777766666554
No 27
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=88.84 E-value=4.8 Score=43.62 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=89.5
Q ss_pred HHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcc--hhhhhhHHHHHHhhhhHH
Q 019167 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKE--VALHCGIMLRECIKFPSL 159 (345)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~d--ial~~G~mLRecik~e~l 159 (345)
++..|+..+..=+.+.|+-+....+.+...- +. . ..+.|+..|+.+..+++ +-..++..|..++.+-.-
T Consensus 49 il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~-----~~-~---~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~ 119 (1230)
T 1u6g_C 49 VVKMILKLLEDKNGEVQNLAVKCLGPLVSKV-----KE-Y---QVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPP 119 (1230)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS-----CH-H---HHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC-----CH-H---HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCC
Confidence 4455666676778888988888888776422 11 1 23678888888765433 323344444443322110
Q ss_pred H------HHHhcchhHHHhhhhcc-CCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhh
Q 019167 160 A------RYILESASFELFFKFVE-LPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQS 232 (345)
Q Consensus 160 a------~~iL~~~~f~~fF~y~~-~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQS 232 (345)
. ..-.....+-.+++.++ .++.++...|+.++.+++....+.+. ..++.....+-.++.+++-.+|+++
T Consensus 120 ~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l~----~~~~~ll~~l~~~L~~~~~~vR~~a 195 (1230)
T 1u6g_C 120 ASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLV----NFHPSILTCLLPQLTSPRLAVRKRT 195 (1230)
T ss_dssp ----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCT----TTHHHHHHHHGGGGGCSSHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHHH----HHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 0 00001223445666776 58899999999999998864333222 2346677777777777777778888
Q ss_pred hhhhHHHhcC
Q 019167 233 LKLLSEFLLE 242 (345)
Q Consensus 233 LKLLgelLld 242 (345)
++.||.+...
T Consensus 196 ~~al~~l~~~ 205 (1230)
T 1u6g_C 196 IIALGHLVMS 205 (1230)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHh
Confidence 8887777653
No 28
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=88.04 E-value=13 Score=35.40 Aligned_cols=199 Identities=13% Similarity=0.036 Sum_probs=126.2
Q ss_pred hhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhc---ccCcchhhhhhHHHHHHhh
Q 019167 79 KEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVC---YDNKEVALHCGIMLRECIK 155 (345)
Q Consensus 79 ~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~g---Y~~~dial~~G~mLRecik 155 (345)
..+.+..|+..|..=+-+.|..++....++-.... ...-+...+..+..|++. -+++++-..+-..|+.+.+
T Consensus 15 ~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~-----~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~ 89 (529)
T 1jdh_A 15 ATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-----SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH 89 (529)
T ss_dssp --CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHH-----HHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT
T ss_pred hHhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCc-----cHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 34556666666665566778888887777654331 122333344555555442 2467777888888999888
Q ss_pred hhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhh
Q 019167 156 FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKL 235 (345)
Q Consensus 156 ~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKL 235 (345)
.+.....+.....+..+.+.+..++-++-..|..++..+...+......+... ......-++|.+++--.+..+...
T Consensus 90 ~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~---g~i~~L~~ll~~~~~~~~~~~~~~ 166 (529)
T 1jdh_A 90 HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLA---GGLQKMVALLNKTNVKFLAITTDC 166 (529)
T ss_dssp SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHH---THHHHHHHGGGCCCHHHHHHHHHH
T ss_pred CchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHc---CCHHHHHHHHhcCCHHHHHHHHHH
Confidence 88877777788888889999999998898999999998876543333232222 345667788888887777777778
Q ss_pred hHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCccc-chhhhhhhhhhhhcCC
Q 019167 236 LSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKN-IQISAFHIFKVFVANP 288 (345)
Q Consensus 236 LgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~-Iq~EAFhvFKvFVANP 288 (345)
|+.+-. .|.......+ +..-+..++.+|++.+.. .+..|-.+......+|
T Consensus 167 L~~la~--~~~~~~~~i~-~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~ 217 (529)
T 1jdh_A 167 LQILAY--GNQESKLIIL-ASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCS 217 (529)
T ss_dssp HHHHHT--TCHHHHHHHH-HTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTST
T ss_pred HHHHHh--CCHHHHHHHH-HCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcCc
Confidence 887665 2333333333 335577777888776543 3333444444343333
No 29
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=86.69 E-value=20 Score=35.98 Aligned_cols=200 Identities=14% Similarity=0.050 Sum_probs=130.9
Q ss_pred HhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc---cCcchhhhhhHHHHHHh
Q 019167 78 CKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECI 154 (345)
Q Consensus 78 ~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY---~~~dial~~G~mLReci 154 (345)
+..+.+..|+..|..=+-+.|..++....++-.... ...-+...+.++..|++.- +++++-..+-..|+.+.
T Consensus 11 ~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~-----~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls 85 (644)
T 2z6h_A 11 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-----SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLS 85 (644)
T ss_dssp -CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTT-----HHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred hhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCCh-----hHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 345566667766666566778888888877765432 1223334555555555532 35677777778888888
Q ss_pred hhhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhh
Q 019167 155 KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLK 234 (345)
Q Consensus 155 k~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLK 234 (345)
+++.....+.....+-.+.+.++.++-++-..|..++..+...+......+... ..+...-++|.++|--.+..++.
T Consensus 86 ~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~---g~i~~Lv~lL~~~~~~~~~~a~~ 162 (644)
T 2z6h_A 86 HHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLA---GGLQKMVALLNKTNVKFLAITTD 162 (644)
T ss_dssp TSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHT---THHHHHHHGGGCCCHHHHHHHHH
T ss_pred cChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHC---CChHHHHHHHCcCCHHHHHHHHH
Confidence 888877777788888889999999988899999999999877554433333333 24566778888887655556667
Q ss_pred hhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcc-cchhhhhhhhhhhhcCC
Q 019167 235 LLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSK-NIQISAFHIFKVFVANP 288 (345)
Q Consensus 235 LLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk-~Iq~EAFhvFKvFVANP 288 (345)
.|+.+-.. |-.... -+.+..-+..++.+|++.+. .++..|..++.....+|
T Consensus 163 ~L~~La~~--~~~~~~-~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~ 214 (644)
T 2z6h_A 163 CLQILAYG--NQESKL-IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCS 214 (644)
T ss_dssp HHHHHHTT--CHHHHH-HHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHhc--CcHHHH-HHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcCc
Confidence 78777752 322222 23334668888888887753 35555666655554443
No 30
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=86.32 E-value=30 Score=34.99 Aligned_cols=188 Identities=11% Similarity=0.144 Sum_probs=113.5
Q ss_pred HHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhccc--CcchhhhhhHHHHHHhhhhH-
Q 019167 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLRECIKFPS- 158 (345)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~--~~dial~~G~mLRecik~e~- 158 (345)
++..|...+..-+.+.|+.+..++..+.....+. ...|+. ++++..++.+-. ++++...+-..+..+++...
T Consensus 225 ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~---~~~~l~--~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~ 299 (861)
T 2bpt_A 225 LMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTF---MKPYME--QALYALTIATMKSPNDKVASMTVEFWSTICEEEID 299 (861)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGG---CHHHHH--HTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHH--HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4555555556667888888888888776644211 122332 266666666544 34556666566665555431
Q ss_pred -----------------HHHHHhcchhHHHhhhhccC-------CCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHH
Q 019167 159 -----------------LARYILESASFELFFKFVEL-------PTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFF 214 (345)
Q Consensus 159 -----------------la~~iL~~~~f~~fF~y~~~-------~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff 214 (345)
..+-.+ ...+..++..+.. ..+.+...|..++..+-.... ..-.+.++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~-~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~-------~~~~~~l~ 371 (861)
T 2bpt_A 300 IAYELAQFPQSPLQSYNFALSSI-KDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCG-------NHILEPVL 371 (861)
T ss_dssp HHHHHHHCTTCSCCCCCHHHHHH-HHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHG-------GGGHHHHH
T ss_pred hhhhhhhccCCchhhHHHHHHHH-HHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHcc-------HhHHHHHH
Confidence 111111 2233444444432 345666666666666543211 12245567
Q ss_pred HHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhh
Q 019167 215 DLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFV 285 (345)
Q Consensus 215 ~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFV 285 (345)
..+.+++.+++.-.|..++..||.+..... ...+..|+. .-+..+...|+|++..++..|...+--+.
T Consensus 372 ~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~-~~~~~~~l~--~il~~l~~~l~d~~~~vr~~a~~~l~~l~ 439 (861)
T 2bpt_A 372 EFVEQNITADNWRNREAAVMAFGSIMDGPD-KVQRTYYVH--QALPSILNLMNDQSLQVKETTAWCIGRIA 439 (861)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHTSSSSC-HHHHHHHHH--HHHHHHHHGGGCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCChhHHHHHHHHHHHHHcCCC-HHHHHHHHH--HHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 777788899999999999999999984322 245566664 45677888899999999888876554333
No 31
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=84.25 E-value=20 Score=36.46 Aligned_cols=189 Identities=11% Similarity=0.082 Sum_probs=114.5
Q ss_pred HHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcc--cCcchhhhhhHHHHHHhhhhHH
Q 019167 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRECIKFPSL 159 (345)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY--~~~dial~~G~mLRecik~e~l 159 (345)
++..+...+..-+.+.|+.+..++..+....... ...|+. +.++..++.+. .++++...+-..+..+.+++.-
T Consensus 218 il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~--~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~ 292 (876)
T 1qgr_A 218 IMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQY---METYMG--PALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMD 292 (876)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGG---CHHHHT--TTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHH---HHHHHH--HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHh
Confidence 4555666677778888999989888887654321 123332 36777776653 3455666655556555554310
Q ss_pred ----------------------HHHHhcchhHHHhhhhcc-------CCCchhhhhhHHHHHHhhhcChhhHHHHHHhhH
Q 019167 160 ----------------------ARYILESASFELFFKFVE-------LPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHY 210 (345)
Q Consensus 160 ----------------------a~~iL~~~~f~~fF~y~~-------~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Ny 210 (345)
.+-.+ .+.+-.+++.+. ..++.+...|...+..+-..-.+ .-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~-------~~~ 364 (876)
T 1qgr_A 293 LAIEASEAAEQGRPPEHTSKFYAKGAL-QYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED-------DIV 364 (876)
T ss_dssp HHHHHHHHHHHSSCCSSCCCCHHHHHH-HHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGG-------GGH
T ss_pred HhhhhccccccCCCccchhHHHHHHHH-HHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCcH-------hhH
Confidence 00000 111222333332 23444444444444444221111 124
Q ss_pred HHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhc
Q 019167 211 DEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVA 286 (345)
Q Consensus 211 d~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVA 286 (345)
+.++......+.+++.-.|..++..||.+...-. ...+..|+ +.-+..+..+|.|++..++..|...+.-|..
T Consensus 365 ~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~-~~~~~~~~--~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~ 437 (876)
T 1qgr_A 365 PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPE-PSQLKPLV--IQAMPTLIELMKDPSVVVRDTAAWTVGRICE 437 (876)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSC-HHHHHHHH--HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCC-HHHHHHHH--HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 5566667778889999999999999999985432 13344565 4578888999999999999999988887664
No 32
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=83.43 E-value=39 Score=33.85 Aligned_cols=197 Identities=14% Similarity=0.010 Sum_probs=119.4
Q ss_pred HHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcch--hhhhhHHHHHH
Q 019167 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEV--ALHCGIMLREC 153 (345)
Q Consensus 76 ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~di--al~~G~mLRec 153 (345)
.+...+.+..|+..|..=+-+.|..++....++...... ....+ ....++..|+....+++. -..+-..|+..
T Consensus 93 ~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~----~~~~v-~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~L 167 (644)
T 2z6h_A 93 AIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEG----AKMAV-RLAGGLQKMVALLNKTNVKFLAITTDCLQIL 167 (644)
T ss_dssp HHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTT----HHHHH-HHTTHHHHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcch----hHHHH-HHCCChHHHHHHHCcCCHHHHHHHHHHHHHH
Confidence 456678889999999887778888888888887665321 11111 123445555554443332 11111233332
Q ss_pred h-hhhHHHHHHhcchhHHHhhhhccCCCchhh-hhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhh
Q 019167 154 I-KFPSLARYILESASFELFFKFVELPTFDVA-SDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (345)
Q Consensus 154 i-k~e~la~~iL~~~~f~~fF~y~~~~~Feia-sDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQ 231 (345)
. ..+.....+.....+..+.+.++.++-+-. -.|...+..+ ..+.......+..+ .....-.++.+++--.++.
T Consensus 168 a~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nL-s~~~~~~~~l~~~g---~l~~L~~ll~~~~~~~~~~ 243 (644)
T 2z6h_A 168 AYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVL-SVCSSNKPAIVEAG---GMQALGLHLTDPSQRLVQN 243 (644)
T ss_dssp HTTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHH-TTCTTHHHHHHHTT---HHHHHHTTTTCSCHHHHHH
T ss_pred HhcCcHHHHHHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHH-hcCcccHHHHHHCC---CHHHHHHHHhcCCHHHHHH
Confidence 2 345555555666666667777665543221 1122223222 33444444444433 4556677888888889999
Q ss_pred hhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcC
Q 019167 232 SLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVAN 287 (345)
Q Consensus 232 SLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVAN 287 (345)
++..|+.+-...... ..-..-+..++.+|++.+..++-.|-.++.-...+
T Consensus 244 a~~~L~nL~~~~~~~------~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~ 293 (644)
T 2z6h_A 244 CLWTLRNLSDAATKQ------EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN 293 (644)
T ss_dssp HHHHHHHHGGGCTTC------CSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcchhh------hhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 999999987654332 22346788999999999999999999888766554
No 33
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=83.33 E-value=36 Score=34.00 Aligned_cols=177 Identities=18% Similarity=0.229 Sum_probs=101.0
Q ss_pred HHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhH----HHHHHhcccCcchhhhhhHHHHH--Hhh
Q 019167 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFEL----LDFLVVCYDNKEVALHCGIMLRE--CIK 155 (345)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~pei----l~~Ll~gY~~~dial~~G~mLRe--cik 155 (345)
++..++..++.=+++.||-+..-...+.+. +||. +..+.+...+++-.. -|.-||- ++.
T Consensus 50 ~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~--------------~~e~~~l~~n~l~kdL~~~n~~i-r~~AL~~L~~i~ 114 (591)
T 2vgl_B 50 LFPDVVNCMQTDNLELKKLVYLYLMNYAKS--------------QPDMAIMAVNSFVKDCEDPNPLI-RALAVRTMGCIR 114 (591)
T ss_dssp GHHHHHHTTSSSCHHHHHHHHHHHHHHHHH--------------SHHHHHTTHHHHGGGSSSSSHHH-HHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHccc--------------CchHHHHHHHHHHHHcCCCCHHH-HHHHHHHHHcCC
Confidence 345566667777788887776666655442 2333 233333444443222 2222332 222
Q ss_pred hhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhh
Q 019167 156 FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKL 235 (345)
Q Consensus 156 ~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKL 235 (345)
.+.+++.+. -.+.+.+..++-.|-.-|...+-.+....+.++.+ +.++....++|.+++...++.++..
T Consensus 115 ~~~~~~~l~-----~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~~------~~~~~~l~~lL~d~d~~V~~~A~~a 183 (591)
T 2vgl_B 115 VDKITEYLC-----EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVED------QGFLDSLRDLIADSNPMVVANAVAA 183 (591)
T ss_dssp SGGGHHHHH-----HHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHH------HHHHHHHHHTTSCSCHHHHHHHHHH
T ss_pred hHHHHHHHH-----HHHHHHcCCCChHHHHHHHHHHHHHHhhChhhccc------ccHHHHHHHHhCCCChhHHHHHHHH
Confidence 333333332 12333445566666666666666665555555432 4678888899999999999999999
Q ss_pred hHHHhcCCCCH-------HHHHHHh---cc------------------------hhhHHHHHHHhcCCcccchhhhhhhh
Q 019167 236 LSEFLLEPPNS-------HIMKRYI---LE------------------------VRFLKVMMTLLKDSSKNIQISAFHIF 281 (345)
Q Consensus 236 LgelLldr~N~-------~vM~~Yi---~~------------------------~~NLkliM~LL~d~sk~Iq~EAFhvF 281 (345)
|+++--+.... ....+-+ ++ .+-+..+..+|++.+..|.+||-..+
T Consensus 184 L~~i~~~~~~~~~~~l~~~~~~~Ll~~l~~~~~~~q~~il~~l~~l~~~~~~~~~~~l~~l~~~l~~~~~~V~~ea~~~i 263 (591)
T 2vgl_B 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVL 263 (591)
T ss_dssp HHHHTTSCCSCCSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHHHHHHHHHHTTCSCSSTTHHHHHHHHHH
T ss_pred HHHHHhhCCCccchhccHHHHHHHHHcCCCCCchHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 99988765421 1121211 11 12344555668888999999998765
Q ss_pred hhh
Q 019167 282 KVF 284 (345)
Q Consensus 282 KvF 284 (345)
--+
T Consensus 264 ~~l 266 (591)
T 2vgl_B 264 MKF 266 (591)
T ss_dssp HHS
T ss_pred HHH
Confidence 443
No 34
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=82.03 E-value=52 Score=34.30 Aligned_cols=198 Identities=14% Similarity=0.016 Sum_probs=111.1
Q ss_pred HHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcc--hhhhhhHHHHH-
Q 019167 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKE--VALHCGIMLRE- 152 (345)
Q Consensus 76 ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~d--ial~~G~mLRe- 152 (345)
.+...+.+..|+..|..=+-+.|+.+.....++.....+. ...+ ....++..|+..-..++ +--.+-..|+.
T Consensus 229 ~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~----~~~v-~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~L 303 (780)
T 2z6g_A 229 AIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGA----KMAV-RLAGGLQKMVALLNKTNVKFLAITTDCLQIL 303 (780)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTH----HHHH-HHTTHHHHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhh----HHHH-HHcCCHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4555677888888887767777788777777766543221 1111 12233444444333222 21112222222
Q ss_pred HhhhhHHHHHHhcchhHHHhhhhccCCCchhhh-hhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhh
Q 019167 153 CIKFPSLARYILESASFELFFKFVELPTFDVAS-DAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (345)
Q Consensus 153 cik~e~la~~iL~~~~f~~fF~y~~~~~Feias-DAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQ 231 (345)
|..++.....+.....+..+.+.+..++-+... .|...+..+ ..+.......+..+ .....-.+|.+++--+++.
T Consensus 304 a~~~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~L-s~~~~~~~~i~~~g---~l~~Ll~lL~~~~~~~~~~ 379 (780)
T 2z6g_A 304 AYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVL-SVCSSNKPAIVEAG---GMQALGLHLTDPSQRLVQN 379 (780)
T ss_dssp HTTCHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHH-HTSTTHHHHHHHTT---HHHHHGGGTTCSCHHHHHH
T ss_pred hcCChHHHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHh-hcChHHHHHHHHhc---hHHHHHHHHcCCchHHHHH
Confidence 223344444455555566666666655443321 112222222 11222222222221 3445567888888888999
Q ss_pred hhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCC
Q 019167 232 SLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANP 288 (345)
Q Consensus 232 SLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP 288 (345)
++..|+.|....... .....-+..++.+|++++..++..|..++.-+..++
T Consensus 380 a~~~L~~L~~~~~~~------~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~ 430 (780)
T 2z6g_A 380 CLWTLRNLSDAATKQ------EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNN 430 (780)
T ss_dssp HHHHHHHHHTTCTTC------SCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHhccchhh------hhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC
Confidence 999999887655432 234567889999999999999999999888776654
No 35
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=80.39 E-value=62 Score=34.06 Aligned_cols=224 Identities=17% Similarity=0.213 Sum_probs=126.1
Q ss_pred HHHHhhhhhcCCCCCC-------CCHHHHHHHHHHHHh-hcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchh
Q 019167 49 NFVTMRCMLSGDGEVE-------PNADQVLQLATEVCK-EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCV 120 (345)
Q Consensus 49 ~l~~mk~il~g~~e~e-------p~~e~~~qL~~ei~~-~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v 120 (345)
.|.-+-.++.++++.+ ...+...+++.++.+ .+-+..|+..|..=+|..|-.+.++...++..+... +=
T Consensus 82 ~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~---~Q 158 (651)
T 3grl_A 82 ALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQ---VQ 158 (651)
T ss_dssp HHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHH---HH
T ss_pred HHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHH---HH
Confidence 3445555666655422 112344567777755 588999999999999999999999999998765431 34
Q ss_pred HHhhhcHhHHHHHHhcccCc-chhhhhhH-HHHH-HhhhhHHHHHHhcchhHHHhhhhccCCCc----hhhhhhHHHHHH
Q 019167 121 QFIENHFELLDFLVVCYDNK-EVALHCGI-MLRE-CIKFPSLARYILESASFELFFKFVELPTF----DVASDAFSTFKD 193 (345)
Q Consensus 121 ~Yl~~~peil~~Ll~gY~~~-dial~~G~-mLRe-cik~e~la~~iL~~~~f~~fF~y~~~~~F----eiasDAf~Tfke 193 (345)
+++...|.-+..|+.--+++ |+.=+-+. +|-+ +-.+..+-+.+=.-.-|..+|+-++...- .|.+|++..+..
T Consensus 159 ~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~n 238 (651)
T 3grl_A 159 QIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQN 238 (651)
T ss_dssp HHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHH
T ss_pred HHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHH
Confidence 57777888888888876654 21111111 1111 12223333333333468888888876665 788888888888
Q ss_pred hhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCce---e-h--hh---hhhhhHHHhcCCCC----HHHHHHHhcchhhHH
Q 019167 194 LLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYV---T-R--RQ---SLKLLSEFLLEPPN----SHIMKRYILEVRFLK 260 (345)
Q Consensus 194 llt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYV---T-k--RQ---SLKLLgelLldr~N----~~vM~~Yi~~~~NLk 260 (345)
|+..+.+-=.-|.+.+ ++...-.|+..+.-. + + +- .+.++ .+|+.+.| ..-..+-+.+..-+.
T Consensus 239 LLr~N~sNQ~~FrEt~---~i~~L~~LL~~~~~~~~W~~Qk~~N~~~~L~iI-rlLv~~~~~~~~t~~nQ~~~~~~g~l~ 314 (651)
T 3grl_A 239 LLKNNNSNQNFFKEGS---YIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLV-RVLVSPNNPPGATSSCQKAMFQCGLLQ 314 (651)
T ss_dssp HHTTCHHHHHHHHHTT---CGGGGGGGGCCCSCSSCCCHHHHHHHHHHHHHH-HHHTCTTSCHHHHHHHHHHHHHTTHHH
T ss_pred HHhcCHHHHHHHHHcC---CHHHHHHHhCCCccccccHHHHHHHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHCCCHH
Confidence 8876644333333333 222334566543211 0 0 11 22223 34444544 223334444555566
Q ss_pred HHHHHhcCC--cccchhhhhh
Q 019167 261 VMMTLLKDS--SKNIQISAFH 279 (345)
Q Consensus 261 liM~LL~d~--sk~Iq~EAFh 279 (345)
.++.++... +..|+.+|-.
T Consensus 315 ~Ll~ll~~~~~p~~i~~~Al~ 335 (651)
T 3grl_A 315 QLCTILMATGVPADILTETIN 335 (651)
T ss_dssp HHHHHHTCSSCCHHHHHHHHH
T ss_pred HHHHHHccCCCCHHHHHHHHH
Confidence 677777765 3445555543
No 36
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=79.56 E-value=12 Score=35.83 Aligned_cols=143 Identities=15% Similarity=0.193 Sum_probs=93.7
Q ss_pred HHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHH
Q 019167 170 ELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIM 249 (345)
Q Consensus 170 ~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM 249 (345)
-.++.+++.++-+|-..|..++..+...... ++. ++.++.....++.++||-+|..++..+|.+... +
T Consensus 444 ~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~---~~~---~~~llp~l~~~~~~~~~~~R~~a~~~l~~l~~~------~ 511 (588)
T 1b3u_A 444 SLCMAWLVDHVYAIREAATSNLKKLVEKFGK---EWA---HATIIPKVLAMSGDPNYLHRMTTLFCINVLSEV------C 511 (588)
T ss_dssp HHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH---HHH---HHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHH------H
T ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHhCc---hhH---HHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHh------c
Confidence 3445667788888888888888887664322 221 356666677788999999999999999998641 1
Q ss_pred HHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCCCCcccHHHHHH
Q 019167 250 KRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKEL 329 (345)
Q Consensus 250 ~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~~DeqF~dEK~~ 329 (345)
..-.--+.-+..++.+|+|+..+++..|...+..++..-. +.. + .+.++..|.....|+ |. +-|..
T Consensus 512 ~~~~~~~~~~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~--~~~---~---~~~~~p~l~~l~~d~---d~---~vr~~ 577 (588)
T 1b3u_A 512 GQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILD--NST---L---QSEVKPILEKLTQDQ---DV---DVKYF 577 (588)
T ss_dssp HHHHHHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSC--HHH---H---HHHHHHHHHHHTTCS---SH---HHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCchHHHHHHHHHHHHHHHhc--hhh---h---HHHHHHHHHHHcCCC---ch---hHHHH
Confidence 1001124567788899999999999999988877664221 111 1 145556666655553 43 44666
Q ss_pred HHHHHhhcC
Q 019167 330 IMKEIERVS 338 (345)
Q Consensus 330 lI~~I~~L~ 338 (345)
....+..+.
T Consensus 578 a~~al~~l~ 586 (588)
T 1b3u_A 578 AQEALTVLS 586 (588)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 666666553
No 37
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=78.03 E-value=2.8 Score=36.61 Aligned_cols=110 Identities=16% Similarity=0.250 Sum_probs=86.8
Q ss_pred HhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhc-CCCceehhhhhhhhHHHhcCCCCHHHH
Q 019167 171 LFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLT-SSNYVTRRQSLKLLSEFLLEPPNSHIM 249 (345)
Q Consensus 171 ~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~-s~NYVTkRQSLKLLgelLldr~N~~vM 249 (345)
.|++.++..+...--.|...+..++..|..+. ..+|.+++..+.+++. .+|...+..+++.||.+...- ..-+
T Consensus 19 ~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~----~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l--~~~~ 92 (242)
T 2qk2_A 19 DFYDKLEEKKWTLRKESLEVLEKLLTDHPKLE----NGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGL--AKRF 92 (242)
T ss_dssp THHHHHTCSSHHHHHHHHHHHHHHHHHCSSBC----CCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH--GGGG
T ss_pred HHHhhhccCCHHHHHHHHHHHHHHHccCCCCC----CCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH--hhhH
Confidence 46677788899988889999998888765443 4678899999999995 999999999999999998311 1112
Q ss_pred HHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCC
Q 019167 250 KRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANP 288 (345)
Q Consensus 250 ~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP 288 (345)
..|+ +.-+..++..|+|++..++--|....+-++.+.
T Consensus 93 ~~~~--~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~ 129 (242)
T 2qk2_A 93 SNYA--SACVPSLLEKFKEKKPNVVTALREAIDAIYAST 129 (242)
T ss_dssp HHHH--HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 2343 446889999999999999999999999888765
No 38
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=77.96 E-value=21 Score=32.96 Aligned_cols=186 Identities=9% Similarity=-0.018 Sum_probs=101.1
Q ss_pred CCCchhhhhHHHHHHHHhhcccCCccchh--HH--hh--hcHhHHHHHHhcc--cCcchhhhhhHHHHHHhhhhHHHHHH
Q 019167 92 ILGWEARKDLVHCWSILLKQKVDSTYCCV--QF--IE--NHFELLDFLVVCY--DNKEVALHCGIMLRECIKFPSLARYI 163 (345)
Q Consensus 92 ~L~fE~RKdv~~If~~llr~~~~~~~p~v--~Y--l~--~~peil~~Ll~gY--~~~dial~~G~mLRecik~e~la~~i 163 (345)
..+.+.|.-++.++.+++++.-.....-+ .| +- .+..|-..|+.+- +++.+ -.++..|-+..+++.-..
T Consensus 48 ~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~~~~l~~~~~~~ik~~ll~~l~~~~~~v-~~~~~~i~~ia~~~~~~~-- 124 (462)
T 1ibr_B 48 GNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRP-SSASQCVAGIACAEIPVN-- 124 (462)
T ss_dssp TSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCCSSS-CSHHHHHHHHHHHHGGGT--
T ss_pred CCChHHHHHHHHHHHHhccccchHHHHHHHhhhhcCCHHHHHHHHHHHHHHhCCCCchh-hHHHHHHHHHHHHhcccc--
Confidence 34667777777777776654311000000 00 10 1233444444432 23445 555555555555431100
Q ss_pred hcchhHHHhhhhccCC--CchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCC--CceehhhhhhhhHHH
Q 019167 164 LESASFELFFKFVELP--TFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSS--NYVTRRQSLKLLSEF 239 (345)
Q Consensus 164 L~~~~f~~fF~y~~~~--~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~--NYVTkRQSLKLLgel 239 (345)
-..+.+-.+++.++.+ +.++---|+.++..+..... .+.+..+.+.++..+.+++.++ +--.|..+++-|+.+
T Consensus 125 ~w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~---~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~ 201 (462)
T 1ibr_B 125 QWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDID---PEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNS 201 (462)
T ss_dssp CCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSC---GGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCC---chhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 1123444566677777 77777788888888876431 1224556677888888888888 788899999999997
Q ss_pred hcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhh
Q 019167 240 LLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFV 285 (345)
Q Consensus 240 Lldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFV 285 (345)
+.--. ..+..+...+.-+..+-.++.+....++-.|+.+|.-++
T Consensus 202 ~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~ 245 (462)
T 1ibr_B 202 LEFTK--ANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIM 245 (462)
T ss_dssp TTTTH--HHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHH--HhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 63100 000000000011334445567777777777777776554
No 39
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=76.00 E-value=71 Score=32.35 Aligned_cols=110 Identities=8% Similarity=0.082 Sum_probs=72.8
Q ss_pred hhhhccCC--CchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHH
Q 019167 172 FFKFVELP--TFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIM 249 (345)
Q Consensus 172 fF~y~~~~--~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM 249 (345)
+.+.+..+ +-++...|+..+..+...-..-....... +.+...+..++.+++.-.|+++++.|+.++... ...+
T Consensus 177 l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~--~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~--~~~~ 252 (876)
T 1qgr_A 177 IIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESER--HFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY--YQYM 252 (876)
T ss_dssp HHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHH--HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHS--GGGC
T ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh--HHHH
Confidence 44555555 67888888888887764211100000000 124555566778888888999999999999743 3445
Q ss_pred HHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhc
Q 019167 250 KRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVA 286 (345)
Q Consensus 250 ~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVA 286 (345)
..|+. +.-+..++..+.+....++..|+..+.-++.
T Consensus 253 ~~~~~-~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~ 288 (876)
T 1qgr_A 253 ETYMG-PALFAITIEAMKSDIDEVALQGIEFWSNVCD 288 (876)
T ss_dssp HHHHT-TTHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 56665 2457777788889888999999988877764
No 40
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=75.83 E-value=57 Score=31.15 Aligned_cols=188 Identities=11% Similarity=-0.001 Sum_probs=102.9
Q ss_pred HhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcch------hhhhhHHHH
Q 019167 78 CKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEV------ALHCGIMLR 151 (345)
Q Consensus 78 ~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~di------al~~G~mLR 151 (345)
+..+++..++..+..=+.+.|..+..-+..+...-..... ...| .++++..+...-.+++- +-..|.+..
T Consensus 278 ~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~-~~~~---~~~l~p~l~~~l~d~~~~vR~~a~~~l~~l~~ 353 (588)
T 1b3u_A 278 TKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCR-ENVI---MSQILPCIKELVSDANQHVKSALASVIMGLSP 353 (588)
T ss_dssp HHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTH-HHHH---HHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHH
T ss_pred chhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhhh-hhHH---HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 3456777777777777778888877777665543221100 0011 23444444433333321 112222221
Q ss_pred HHhhhhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhh
Q 019167 152 ECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (345)
Q Consensus 152 ecik~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQ 231 (345)
-+ ..+..... .+--+...+..++=+|-..|+.++..+...... + ...+.+...+.+++.+++|-+|..
T Consensus 354 ~~-~~~~~~~~-----l~p~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~---~---~~~~~~lp~l~~~~~d~~~~vr~~ 421 (588)
T 1b3u_A 354 IL-GKDNTIEH-----LLPLFLAQLKDECPEVRLNIISNLDCVNEVIGI---R---QLSQSLLPAIVELAEDAKWRVRLA 421 (588)
T ss_dssp HH-CHHHHHHH-----THHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCH---H---HHHHHHHHHHHHHHTCSSHHHHHH
T ss_pred Hh-hHhHHHHH-----HHHHHHHHhCCCchHHHHHHHHHHHHHHHhcCH---H---HHHHHHHHHHHHHhcCCCchHHHH
Confidence 11 11111111 111223334555666766677666666543221 1 112445566667889999999999
Q ss_pred hhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcC
Q 019167 232 SLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVAN 287 (345)
Q Consensus 232 SLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVAN 287 (345)
++..||.+...-. .-.-.+.-+..++.+|.|+...++..|...+..++..
T Consensus 422 ~~~~l~~l~~~~~------~~~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~ 471 (588)
T 1b3u_A 422 IIEYMPLLAGQLG------VEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEK 471 (588)
T ss_dssp HHHHHHHHHHHHC------GGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC------HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 9999998863100 0011345577888899999999999999888766643
No 41
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=74.80 E-value=24 Score=33.59 Aligned_cols=163 Identities=12% Similarity=0.099 Sum_probs=105.9
Q ss_pred HHhhcHHHHHHhhC-CCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhc----HhHHHHHHhcccCc--chhhhhhHH
Q 019167 77 VCKEDVLILLVHKL-PILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH----FELLDFLVVCYDNK--EVALHCGIM 149 (345)
Q Consensus 77 i~~~dll~~Li~~l-~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~----peil~~Ll~gY~~~--dial~~G~m 149 (345)
+...+.+..|+..| ..=+-+.++.++....++-....+.+. . +... |-++..|-.+.+.+ ++.-.+...
T Consensus 166 i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~---~-i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~a 241 (354)
T 3nmw_A 166 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA---D-ICAVDGALAFLVGTLTYRSQTNTLAIIESGGGI 241 (354)
T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHH---H-HHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhH---H-HHHhcCcHHHHHHHhccCCCcccHHHHHHHHHH
Confidence 44556677777763 334556777665554444321111111 1 1111 22233332222222 355556667
Q ss_pred HHHHhh----hhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCC
Q 019167 150 LRECIK----FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSN 225 (345)
Q Consensus 150 LRecik----~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~N 225 (345)
||-... .+.-...+.+...+-.+.+.+..+++++-..|..++..+-.....-.......+ .+...-.||.+++
T Consensus 242 L~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G---~i~~Lv~LL~s~~ 318 (354)
T 3nmw_A 242 LRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMG---AVSMLKNLIHSKH 318 (354)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTT---HHHHHHTTTTCSS
T ss_pred HHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCC---CHHHHHHHHhCCC
Confidence 777654 566667788888889999999999999999999999998666666555555543 4566778999999
Q ss_pred ceehhhhhhhhHHHhcCCCCH
Q 019167 226 YVTRRQSLKLLSEFLLEPPNS 246 (345)
Q Consensus 226 YVTkRQSLKLLgelLldr~N~ 246 (345)
--+|+.+..-|..|..++.+.
T Consensus 319 ~~i~~~A~~aL~nL~~~~~~~ 339 (354)
T 3nmw_A 319 KMIAMGSAAALRNLMANRPAK 339 (354)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHHcCCHHH
Confidence 999999999999999887764
No 42
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=74.64 E-value=52 Score=31.97 Aligned_cols=139 Identities=14% Similarity=0.232 Sum_probs=104.9
Q ss_pred HHHHHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccC-------cchhhh
Q 019167 73 LATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDN-------KEVALH 145 (345)
Q Consensus 73 L~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~-------~dial~ 145 (345)
||.-+..++.+..+...+..=.||.--|+...|..+|-+.. ..+.+||..|-|-+.....+-=. ..+-=.
T Consensus 156 la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk---~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKL 232 (341)
T 1upk_A 156 LAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHK---LLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKL 232 (341)
T ss_dssp HHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSH---HHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccH---HHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHH
Confidence 44445555666778888889999999999999999887643 25679999887765544333222 233445
Q ss_pred hhHHHHHHhhhhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhh-cC-hhhHHHHHHhhHHHHH
Q 019167 146 CGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLT-KH-LTVVSEYLTAHYDEFF 214 (345)
Q Consensus 146 ~G~mLRecik~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt-~H-k~lvaefl~~Nyd~Ff 214 (345)
.|.+|-+=.-+....+||-+.+.+.-+...+..+.=-|.-+||..||--.. .| ++-|...|..|=++..
T Consensus 233 LgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K~~~I~~IL~~Nr~kLl 303 (341)
T 1upk_A 233 LGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLI 303 (341)
T ss_dssp HHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHH
T ss_pred HHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCCChHHHHHHHHHHHHHH
Confidence 688888877888999999988899988999999999999999999996644 23 3677899999977654
No 43
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=72.26 E-value=34 Score=37.43 Aligned_cols=174 Identities=18% Similarity=0.213 Sum_probs=101.5
Q ss_pred ccCcchhhhhhHHHHHHhhhhHHHHHHhc--chhHHHhhhh----ccCCCchhhhhhHHHHHHhhhc-----ChhhHHHH
Q 019167 137 YDNKEVALHCGIMLRECIKFPSLARYILE--SASFELFFKF----VELPTFDVASDAFSTFKDLLTK-----HLTVVSEY 205 (345)
Q Consensus 137 Y~~~dial~~G~mLRecik~e~la~~iL~--~~~f~~fF~y----~~~~~FeiasDAf~Tfkellt~-----Hk~lvaef 205 (345)
-++||.-...=.+++.++.+=. ..+|. ++.|..+++. +..++-||+.-++.++.+++.+ ....+.+|
T Consensus 815 ~~~Pe~r~~ff~ll~~~~~~~f--~~~~~~~~~~~~~~~~~~~~a~~h~~r~~~~~~l~~~~~ll~~~~~~~~~~~~~~f 892 (1023)
T 4hat_C 815 TEYPEHRVEFYKLLKVINEKSF--AAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEF 892 (1023)
T ss_dssp SSSHHHHHHHHHHHHHHHHHCT--HHHHTSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHCSSHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHCh--HHHHcCCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Confidence 3568888777788888777632 33444 4478888875 4789999999999999999862 34577799
Q ss_pred HHhhHHHHHHHHHhhhcCCCce-ehhhhhhhhHHHh---cC----------------CCCHHHHHHHhcchhhHHHHHHH
Q 019167 206 LTAHYDEFFDLYEKLLTSSNYV-TRRQSLKLLSEFL---LE----------------PPNSHIMKRYILEVRFLKVMMTL 265 (345)
Q Consensus 206 l~~Nyd~Ff~~~n~LL~s~NYV-TkRQSLKLLgelL---ld----------------r~N~~vM~~Yi~~~~NLkliM~L 265 (345)
..+.|-.++.+.-..+..+... .=++.-.+|+.++ .+ .+|...+..|+++ +
T Consensus 893 ~~~~~~~~~~~~~~v~td~~h~~~f~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~---------~ 963 (1023)
T 4hat_C 893 HKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLAN---------M 963 (1023)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCGGGHHHHHHHHHHHHHHHHTTCCCSCSSCTTSSCTTCCHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHHcCCcccccCCccccCCCCchHHHHHHHHHH---------H
Confidence 9999999877766544444332 1122223333322 21 3566666666543 4
Q ss_pred hcCCccc---chhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCCCCcccHHHHHH
Q 019167 266 LKDSSKN---IQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKEL 329 (345)
Q Consensus 266 L~d~sk~---Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~~DeqF~dEK~~ 329 (345)
|.+.=+| -|++.|+. -+|-. -+.+.... ..-|+=|+. ++.|..|. .|+-|.+||+.
T Consensus 964 l~~~fp~~~~~qi~~fv~-~l~~~-~~~~~~f~---~~lrdfli~-~ke~~~~~--~~~~~~~~~~~ 1022 (1023)
T 4hat_C 964 LSNAFPHLTSEQIASFLS-ALTKQ-CKDLVVFK---GTLRDFLVQ-IKEVGGDP--TDYLFAEDKEN 1022 (1023)
T ss_dssp HHHHCTTSCHHHHHHHHH-HHHHT-TTCHHHHH---HHHHHHHHH-TTSSSCCG--GGGGCC-----
T ss_pred HHHhCCCCCHHHHHHHHH-HHHHc-cCCHHHHH---HHHHHHhHH-hHhhcCCC--hHHHhHHhhhc
Confidence 4433333 36666652 12211 11222222 333555555 66788776 56789999863
No 44
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=72.07 E-value=9.3 Score=36.84 Aligned_cols=52 Identities=15% Similarity=0.066 Sum_probs=44.0
Q ss_pred hcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhh-cHhHHHHHHhc
Q 019167 80 EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-HFELLDFLVVC 136 (345)
Q Consensus 80 ~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~peil~~Ll~g 136 (345)
.++|..|+ +...+|.+.|..++.|.+++||..+ |+++++.+ +|..++.++..
T Consensus 70 f~lL~nL~-~~~~~~~~~rE~aarII~ssLRNNP----~Al~~V~~~~p~fv~~lf~~ 122 (315)
T 3qml_C 70 FALLANLS-LNENLPLTLRELSTRVITSCLRNNP----PVVEFINESFPNFKSKIMAA 122 (315)
T ss_dssp HHHHHHHH-HCTTSCHHHHHHHHHHHHHHHTTCH----HHHHHHHHHCTTHHHHHHHH
T ss_pred HHHHHHHH-hhccCChhHHHHHHHHHHHHHccCH----HHHHHHHHhChhHHHHHHHH
Confidence 36788888 5556999999999999999999765 78999997 89999999864
No 45
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=71.12 E-value=37 Score=36.43 Aligned_cols=227 Identities=12% Similarity=0.094 Sum_probs=144.0
Q ss_pred HHHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCc-chh--hhhhHHHH
Q 019167 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNK-EVA--LHCGIMLR 151 (345)
Q Consensus 75 ~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~-dia--l~~G~mLR 151 (345)
..+.+.+.+..|+..|..=+.+.|+.++...+++...... ......+- -.+++.-|+.--... +.- ..+=.-|+
T Consensus 530 ~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p-~~~~~~~~--~~~aIppLv~LL~~~~~~l~~~eAl~AL~ 606 (810)
T 3now_A 530 GKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINP-EVSFSGQR--SLDVIRPLLNLLQQDCTALENFESLMALT 606 (810)
T ss_dssp HHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCH-HHHTTTHH--HHHTHHHHHHTTSTTSCHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCCh-hhhhcchh--hhcHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 4566778888888888777888999998888887764221 00000010 012333333322211 111 11222344
Q ss_pred HHhhh-hHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehh
Q 019167 152 ECIKF-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRR 230 (345)
Q Consensus 152 ecik~-e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkR 230 (345)
-+..+ +.....+.+...+..+.+++..++-.|-.-|..++.-+.+ ++.....|.. +. .-..-.-.|+.+++.-+|+
T Consensus 607 NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~-~~~~~~~~v~-~~-g~l~~Lv~LL~s~d~~vq~ 683 (810)
T 3now_A 607 NLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVM-SEDVIKMFEG-NN-DRVKFLALLCEDEDEETAT 683 (810)
T ss_dssp HHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTT-SHHHHHHHHS-SS-SHHHHHHHGGGCSSHHHHH
T ss_pred HHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhC-ChHHHHHHHh-cc-CcHHHHHHHhcCCCHHHHH
Confidence 44444 5667777777778888888888999999999999988766 7776667763 21 2455666899999999999
Q ss_pred hhhhhhHHHhcCCCCHHHHHHHhcc-hhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHH
Q 019167 231 QSLKLLSEFLLEPPNSHIMKRYILE-VRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELL 309 (345)
Q Consensus 231 QSLKLLgelLldr~N~~vM~~Yi~~-~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl 309 (345)
.+.-.|+-|-.. +-.. .++|-+ ..-+..+..||++.+..+|.+|--..-=.+.. +++....+..- --+.-|
T Consensus 684 ~Aa~ALanLt~~--s~~~-~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~---s~e~~~~l~e~--G~i~~L 755 (810)
T 3now_A 684 ACAGALAIITSV--SVKC-CEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINA---GEEIAKKLFET--DIMELL 755 (810)
T ss_dssp HHHHHHHHHHHH--CHHH-HHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTT---CHHHHHHHHTS--THHHHH
T ss_pred HHHHHHHHHhCC--CHHH-HHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHC--CCHHHH
Confidence 999999999862 2222 244444 78889999999999999999998765444432 22333333322 345556
Q ss_pred hccCCC
Q 019167 310 RNLSVG 315 (345)
Q Consensus 310 ~~f~~d 315 (345)
.+...+
T Consensus 756 ~~LL~~ 761 (810)
T 3now_A 756 SGLGQL 761 (810)
T ss_dssp TTSCCC
T ss_pred HHHHhC
Confidence 665543
No 46
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=69.92 E-value=47 Score=27.62 Aligned_cols=94 Identities=14% Similarity=0.054 Sum_probs=61.9
Q ss_pred hHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHH
Q 019167 168 SFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSH 247 (345)
Q Consensus 168 ~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~ 247 (345)
.+..+.+.+..++-+|-..|...+..+= +. .-...+..++.+++.-+|+.++.-||.+
T Consensus 113 ~~~~L~~~l~d~~~~vr~~a~~aL~~~~--~~------------~~~~~L~~~l~d~~~~vr~~a~~aL~~~-------- 170 (211)
T 3ltm_A 113 AVEPLIKALKDEDWFVRIAAAFALGEIG--DE------------RAVEPLIKALKDEDGWVRQSAADALGEI-------- 170 (211)
T ss_dssp GHHHHHHHTTCSSHHHHHHHHHHHHHHC--CG------------GGHHHHHHHTTCSSHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHcC--CH------------HHHHHHHHHHcCCCHHHHHHHHHHHHHh--------
Confidence 3444455566677777777776666651 22 1233455677888888888888888876
Q ss_pred HHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCC
Q 019167 248 IMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPN 289 (345)
Q Consensus 248 vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~ 289 (345)
.+++-+..+..+|.|++..++..|....+-+--++.
T Consensus 171 ------~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~~~~ 206 (211)
T 3ltm_A 171 ------GGERVRAAMEKLAETGTGFARKVAVNYLETHKSFNH 206 (211)
T ss_dssp ------CSHHHHHHHHHHHHHCCHHHHHHHHHHHHC------
T ss_pred ------CchhHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCC
Confidence 457778888888999888888888877665554443
No 47
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=69.76 E-value=51 Score=32.64 Aligned_cols=162 Identities=12% Similarity=0.099 Sum_probs=104.9
Q ss_pred HHHhhcHHHHHHhh-CCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhc----HhHHHHHHhcccCc--chhhhhhH
Q 019167 76 EVCKEDVLILLVHK-LPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH----FELLDFLVVCYDNK--EVALHCGI 148 (345)
Q Consensus 76 ei~~~dll~~Li~~-l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~----peil~~Ll~gY~~~--dial~~G~ 148 (345)
.+...+.+..|+.. +..=+-+.++.++....++-....+.+. -+... |-++..|-.+.+.+ ++.-.+..
T Consensus 281 ~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~----~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~ 356 (458)
T 3nmz_A 281 TLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA----DICAVDGALAFLVGTLTYRSQTNTLAIIESGGG 356 (458)
T ss_dssp HHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHH----HHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHH----HHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHH
Confidence 34455777778876 4444566676655444443321111111 11112 22222322232222 35556666
Q ss_pred HHHHHhh----hhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCC
Q 019167 149 MLRECIK----FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSS 224 (345)
Q Consensus 149 mLRecik----~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~ 224 (345)
.||.+.. .+.-...+.+...+-.+.+.+..+++++-..|..++..+-..+........... .+..+..||.++
T Consensus 357 aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G---~I~~Lv~LL~s~ 433 (458)
T 3nmz_A 357 ILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMG---AVSMLKNLIHSK 433 (458)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHT---HHHHHHTTTTCS
T ss_pred HHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCC---CHHHHHHHHhCC
Confidence 7777653 566667777888888999999999999999999999998766666665555543 556677899999
Q ss_pred CceehhhhhhhhHHHhcCCC
Q 019167 225 NYVTRRQSLKLLSEFLLEPP 244 (345)
Q Consensus 225 NYVTkRQSLKLLgelLldr~ 244 (345)
+--+++.+..-|..|+.+++
T Consensus 434 ~~~v~~~Aa~AL~nL~~~~p 453 (458)
T 3nmz_A 434 HKMIAMGSAAALRNLMANRP 453 (458)
T ss_dssp SHHHHHHHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHHHHHHHcCCH
Confidence 99999999999999987654
No 48
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=66.13 E-value=45 Score=30.89 Aligned_cols=138 Identities=9% Similarity=0.091 Sum_probs=94.0
Q ss_pred hhhhHHHHHHhhhhHHHHHHhcchhHHHhhh-hccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhc
Q 019167 144 LHCGIMLRECIKFPSLARYILESASFELFFK-FVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLT 222 (345)
Q Consensus 144 l~~G~mLRecik~e~la~~iL~~~~f~~fF~-y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~ 222 (345)
..+-..|.+++.....+.-+.....+-.++. .+..++=+|-..|..++-.+-+.++..-..++..+ -....-+||.
T Consensus 58 ~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g---~l~~Ll~LL~ 134 (296)
T 1xqr_A 58 EGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLG---ALRKLLRLLD 134 (296)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTT---HHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCC---CHHHHHHHHc
Confidence 3344555555555555555544555556667 77888889999999999888776655444444443 3455567777
Q ss_pred C-CCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcC
Q 019167 223 S-SNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVAN 287 (345)
Q Consensus 223 s-~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVAN 287 (345)
+ ++=-.++.++--|+.|.- .|......++. ..-+..+..+|++.+..+|.+|--...=+...
T Consensus 135 ~~~~~~v~~~A~~ALsnl~~--~~~~~~~~~~~-~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~ 197 (296)
T 1xqr_A 135 RDACDTVRVKALFAISCLVR--EQEAGLLQFLR-LDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVG 197 (296)
T ss_dssp HCSCHHHHHHHHHHHHHHHT--TCHHHHHHHHH-TTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHc--CCcHHHHHHHH-CCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 5 366679999999999874 34443444444 45789999999999999999998776655543
No 49
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=65.47 E-value=35 Score=34.49 Aligned_cols=72 Identities=8% Similarity=-0.002 Sum_probs=43.3
Q ss_pred HHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhc-chhhHHHHHHHhcCCcccchhhhhhhhhhhhc-CCCCCh
Q 019167 215 DLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYIL-EVRFLKVMMTLLKDSSKNIQISAFHIFKVFVA-NPNKPH 292 (345)
Q Consensus 215 ~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~-~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVA-NP~K~~ 292 (345)
..+-..+.+.++-.|+.++.-+|.+-.. |-. -...+..++.+|++....++-|+.++++-.+. +|.--.
T Consensus 388 ~eL~~~l~~~d~e~r~~~v~~I~~la~k---------~~~~~~~~v~~ll~lL~~~~~~v~~~~~~~l~~ii~~~p~l~~ 458 (618)
T 1w63_A 388 KELLYFLDSCEPEFKADCASGIFLAAEK---------YAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHA 458 (618)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHS---------SCCCHHHHHHHHHHHHHHTGGGSCSSHHHHHHHHHHHSCSTHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHH---------hCccHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhcChhHHH
Confidence 3333333344555566666666665431 111 12246778899999988899999999886654 676544
Q ss_pred HHH
Q 019167 293 EVK 295 (345)
Q Consensus 293 ~I~ 295 (345)
.+.
T Consensus 459 ~~v 461 (618)
T 1w63_A 459 YTV 461 (618)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 50
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=65.25 E-value=16 Score=32.87 Aligned_cols=181 Identities=11% Similarity=0.172 Sum_probs=98.6
Q ss_pred CCCCchhhhhHHHHHHH-HhhcccCCccc--hhHHhhhcHhHHHHHHhcc-cCcchhhh--hhHHHHHHhhh---hHHH-
Q 019167 91 PILGWEARKDLVHCWSI-LLKQKVDSTYC--CVQFIENHFELLDFLVVCY-DNKEVALH--CGIMLRECIKF---PSLA- 160 (345)
Q Consensus 91 ~~L~fE~RKdv~~If~~-llr~~~~~~~p--~v~Yl~~~peil~~Ll~gY-~~~dial~--~G~mLRecik~---e~la- 160 (345)
..=+|..||.+..-... ++.... +.. ..+ ..++++.|.++- .++++... +...|....+. +.+.
T Consensus 26 ~s~~w~eRk~al~~L~~~~~~~~~--~i~~~~~~----~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~ 99 (249)
T 2qk1_A 26 TSSKWKDRVEALEEFWDSVLSQTK--KLKSTSQN----YSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSK 99 (249)
T ss_dssp TCSSHHHHHHHHHHHHHHTGGGCC--CBCCTTCC----CHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCH
T ss_pred hcCCHHHHHHHHHHHHHHHHhcCC--ccccCccc----HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccH
Confidence 45578899998887777 765311 111 112 257888888877 45554332 22222221100 0000
Q ss_pred HHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHh
Q 019167 161 RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240 (345)
Q Consensus 161 ~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelL 240 (345)
.|. ...+-.+++.+....=.|..-|...+..+...-.+ ++.+ .+.+..++.....|.+.|.=+|.+++.+|+.++
T Consensus 100 ~y~--~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~-~~~~--~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~ 174 (249)
T 2qk1_A 100 DYV--SLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDP-LASS--GRNEDMLKDILEHMKHKTPQIRMECTQLFNASM 174 (249)
T ss_dssp HHH--HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCT-TCTT--CTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccc-cccC--CcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 000 01122334444444433433333333322221000 0000 115567777778899999999999999999999
Q ss_pred cCCCCH-HHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhh
Q 019167 241 LEPPNS-HIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKV 283 (345)
Q Consensus 241 ldr~N~-~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKv 283 (345)
..-.-. ..+..|+ ++.-+..++.+|.|..+.++-.|+-.+-.
T Consensus 175 ~~~~~~~~~l~~~l-~~~iip~l~~~l~D~~~~VR~aA~~~l~~ 217 (249)
T 2qk1_A 175 KEEKDGYSTLQRYL-KDEVVPIVIQIVNDTQPAIRTIGFESFAI 217 (249)
T ss_dssp HHCCSCSHHHHHHH-TTTHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHcCCcchhHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 643221 4445555 24567788889999999999888876554
No 51
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=62.84 E-value=1.5e+02 Score=30.85 Aligned_cols=171 Identities=10% Similarity=0.065 Sum_probs=99.3
Q ss_pred HhHHHHHHhcccC---cchhhhhhHHHHHHhhhhH---HHHHHhcchhHHHhhhhcc-C--CCchhhhhhHHHHHHhhhc
Q 019167 127 FELLDFLVVCYDN---KEVALHCGIMLRECIKFPS---LARYILESASFELFFKFVE-L--PTFDVASDAFSTFKDLLTK 197 (345)
Q Consensus 127 peil~~Ll~gY~~---~dial~~G~mLRecik~e~---la~~iL~~~~f~~fF~y~~-~--~~FeiasDAf~Tfkellt~ 197 (345)
|.++..++.+|.. +..--..|.+++++-..+. ...-++. ..+...+..++ . ..=|+..++|.-+..++..
T Consensus 725 ~~~~~~l~~~~~~~~~~~~l~l~~~li~~f~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~pd~~~~~f~ll~~~~~~ 803 (963)
T 2x19_B 725 PQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFL-LVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKR 803 (963)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHTTCTTTCHHHHHHHH-HHHHHHHHHHHHCTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccHHHHHHHHHHHHhCCCcchHHHHHHHHH-HHHHHHHHHHhhCcccCchHHHHHHHHHHHHHHh
Confidence 6777788888765 3333445666664433221 1111111 11222222221 1 2347888888888888887
Q ss_pred ChhhHHHHHHhh-HHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcc--hhhHHHHHHHhcCCcccch
Q 019167 198 HLTVVSEYLTAH-YDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILE--VRFLKVMMTLLKDSSKNIQ 274 (345)
Q Consensus 198 Hk~lvaefl~~N-yd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~--~~NLkliM~LL~d~sk~Iq 274 (345)
++..+-. ... ++.++...-..+.+.+.-+.+.++..|++++..-........++.. +.-+..+|..+.+....-.
T Consensus 804 ~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~ 881 (963)
T 2x19_B 804 KPDLFLC--ERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCGEVESVGKVVQEDGRMLLIAVLEAIGGQASRSL 881 (963)
T ss_dssp CGGGGGC--TTSCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHGGGTTSSCHHHHHTTTSHHHHHHHHHHHHTTTSCGGG
T ss_pred CcHHHcC--CcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHhcccCChhH
Confidence 7765521 232 6778888888888999999999999999999754323344444431 2334456666676666555
Q ss_pred hhhhh-hhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccC
Q 019167 275 ISAFH-IFKVFVANPNKPHEVKVILAKNHEKLLELLRNLS 313 (345)
Q Consensus 275 ~EAFh-vFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~ 313 (345)
++..- |+ ..+..+|.+.+..|+.+..
T Consensus 882 ~~~~~~il-------------~~l~~~~~~~~~~~l~~~l 908 (963)
T 2x19_B 882 MDCFADIL-------------FALNKHCFSLLSMWIKEAL 908 (963)
T ss_dssp HHHHHHHH-------------HHHHHHSHHHHHHHHHHHT
T ss_pred HHHHHHHH-------------HHHHHHChHHHHHHHHHHh
Confidence 54322 11 1344456777777776543
No 52
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=62.26 E-value=65 Score=26.49 Aligned_cols=86 Identities=16% Similarity=0.111 Sum_probs=56.8
Q ss_pred HhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHH
Q 019167 171 LFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMK 250 (345)
Q Consensus 171 ~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~ 250 (345)
.+.+.+..++-+|-.-|..++-.+-. ......+.+++.+++.-+|+.++..||.+
T Consensus 80 ~L~~~l~d~~~~vr~~a~~aL~~~~~--------------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~----------- 134 (201)
T 3ltj_A 80 PLIKALKDEDGWVRQSAAVALGQIGD--------------ERAVEPLIKALKDEDWFVRIAAAFALGEI----------- 134 (201)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHCC--------------GGGHHHHHHHTTCSSHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCc--------------HHHHHHHHHHHcCCCHHHHHHHHHHHHHh-----------
Confidence 33344455555565555555544311 12334455677888888888888888876
Q ss_pred HHhcchhhHHHHHHHhcCCcccchhhhhhhhhhh
Q 019167 251 RYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVF 284 (345)
Q Consensus 251 ~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvF 284 (345)
.+++-+..+..+|.|++..++..|-..+.-+
T Consensus 135 ---~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 135 ---GDERAVEPLIKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp ---TCGGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 3467777888888888888888887776655
No 53
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=56.79 E-value=88 Score=30.12 Aligned_cols=176 Identities=13% Similarity=0.080 Sum_probs=94.6
Q ss_pred cHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcchhhhhhHHHHH--HhhhhH
Q 019167 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRE--CIKFPS 158 (345)
Q Consensus 81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~dial~~G~mLRe--cik~e~ 158 (345)
.++...+..++.=+++-||-+..-+..+.... +.-.-++.-+ .+--.+|+ -+.-|.-||- ||+.+.
T Consensus 68 ~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~~-~e~iLv~Nsl----------~kDl~~~N-~~iR~lALRtL~~I~~~~ 135 (355)
T 3tjz_B 68 EAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIA-EDVIIVTSSL----------TKDMTGKE-DSYRGPAVRALCQITDST 135 (355)
T ss_dssp HHHHHHHGGGGCCCHHHHHHHHHHHHHHTTTS-SCGGGGHHHH----------HHHHHSSC-HHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCH-HHHHHHHHHH----------HhhcCCCc-HhHHHHHHHHHhcCCCHH
Confidence 45677888888888988888888887765552 2111122222 22222222 2344555554 344433
Q ss_pred HHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHH
Q 019167 159 LARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSE 238 (345)
Q Consensus 159 la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLge 238 (345)
++..+... +-+-+..++=-|.+-|.-..-.++-..+++|. +|+.....++.+.|+.+.-.++.+|.+
T Consensus 136 m~~~l~~~-----lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~v~--------~~~~~l~~ll~d~n~~V~~~Al~lL~e 202 (355)
T 3tjz_B 136 MLQAIERY-----MKQAIVDKVPSVSSSALVSSLHLLKCSFDVVK--------RWVNEAQEAASSDNIMVQYHALGLLYH 202 (355)
T ss_dssp THHHHHHH-----HHHHHTCSSHHHHHHHHHHHHHHTTTCHHHHH--------TTHHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHH-----HHHHcCCCCHHHHHHHHHHHHHHhccCHHHHH--------HHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 33322211 11123444555666666666666666777663 366667778888888777888888888
Q ss_pred Hhc-CCCCH------------------HHHHHHhc----c------hhhHHHHHHHhcCCcccchhhhhhhh
Q 019167 239 FLL-EPPNS------------------HIMKRYIL----E------VRFLKVMMTLLKDSSKNIQISAFHIF 281 (345)
Q Consensus 239 lLl-dr~N~------------------~vM~~Yi~----~------~~NLkliM~LL~d~sk~Iq~EAFhvF 281 (345)
+-- ||... -...||++ . ..-+.++-..|++.+..|.+||..++
T Consensus 203 i~~~d~~a~~kLv~~l~~~~l~~~~~q~~llr~l~~~~~~d~~~~~~~~~~~l~~~L~~~~~aVvyEa~k~I 274 (355)
T 3tjz_B 203 VRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASRQLEDEDGSRDSPLFDFIESCLRNKHEMVVYEAASAI 274 (355)
T ss_dssp HHTTCHHHHHHHHHHHHSSCCSCHHHHHHHHHHHTCC-----------------CCCCCSSHHHHHHHHHHH
T ss_pred HHhhchHHHHHHHHHHhcCCCcChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 764 33110 01112211 1 22344566667788888999998664
No 54
>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19
Probab=56.45 E-value=1e+02 Score=29.58 Aligned_cols=138 Identities=12% Similarity=0.117 Sum_probs=88.8
Q ss_pred HHHHHHhhCCCCCchhhhh-HHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhc---------ccCcchhhhhhHHHH
Q 019167 82 VLILLVHKLPILGWEARKD-LVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVC---------YDNKEVALHCGIMLR 151 (345)
Q Consensus 82 ll~~Li~~l~~L~fE~RKd-v~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~g---------Y~~~dial~~G~mLR 151 (345)
++...+.--..-.-++|-- |..+++.+.++-.+.-.| + =|.|++.+..+ .+.||.-...=.+||
T Consensus 74 Ll~~VL~DY~~~vp~aRepeVL~l~~tii~kl~~~i~~---~---vp~Il~~VFe~TL~MI~~df~eyPehR~~Ff~LL~ 147 (321)
T 1w9c_A 74 LLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITA---E---IPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQ 147 (321)
T ss_dssp HHHHHHHHHHTSCGGGCCTHHHHHHHHHHHHHGGGGGG---G---HHHHHHHHHHHHHHHHSSTTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcccccHHHHHHHHHHHHHHHHHhhh---h---HHHHHHHHHHHHHHHHhcccccChHHHHHHHHHHH
Confidence 3333333333333445532 555555555543322111 1 26777766542 677999999999999
Q ss_pred HHhhhhHHHHHHhcchhHHHhhhh----ccCCCchhhhhhHHHHHHhhhc---ChhhHHHHHHhhHHHHHHHHHhhhcCC
Q 019167 152 ECIKFPSLARYILESASFELFFKF----VELPTFDVASDAFSTFKDLLTK---HLTVVSEYLTAHYDEFFDLYEKLLTSS 224 (345)
Q Consensus 152 ecik~e~la~~iL~~~~f~~fF~y----~~~~~FeiasDAf~Tfkellt~---Hk~lvaefl~~Nyd~Ff~~~n~LL~s~ 224 (345)
.|+.|-.-+=.-|..++|..+.+- +.-+.-+||--++.++.+++.+ +...+.+|..+.|-....+.-..+..+
T Consensus 148 ai~~~cF~al~~lp~~~fklvidsiiWa~kH~~r~V~e~gL~il~~ll~n~~~~~~~~~~Fy~~fy~~il~~if~VlTDs 227 (321)
T 1w9c_A 148 AVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDT 227 (321)
T ss_dssp HHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHhHHHHHcCCHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 999873333333666777777765 5799999999999999999884 455667888888877777766655544
Q ss_pred C
Q 019167 225 N 225 (345)
Q Consensus 225 N 225 (345)
.
T Consensus 228 ~ 228 (321)
T 1w9c_A 228 S 228 (321)
T ss_dssp S
T ss_pred h
Confidence 4
No 55
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=54.83 E-value=87 Score=25.66 Aligned_cols=85 Identities=15% Similarity=0.085 Sum_probs=57.4
Q ss_pred HHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHH
Q 019167 169 FELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHI 248 (345)
Q Consensus 169 f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~v 248 (345)
+..+.+.+..++-+|-.-|...+..+=. ......+..++.+++.-+|+.++.-||.+
T Consensus 109 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------------~~~~~~L~~~l~d~~~~vr~~A~~aL~~~--------- 165 (201)
T 3ltj_A 109 VEPLIKALKDEDWFVRIAAAFALGEIGD--------------ERAVEPLIKALKDEDGWVRQSAADALGEI--------- 165 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTC--------------GGGHHHHHHHTTCSSHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCC--------------HHHHHHHHHHHcCCCHHHHHHHHHHHHHh---------
Confidence 3344445556666666666555554411 12334456778888888999999999887
Q ss_pred HHHHhcchhhHHHHHHHhcCCcccchhhhhhhh
Q 019167 249 MKRYILEVRFLKVMMTLLKDSSKNIQISAFHIF 281 (345)
Q Consensus 249 M~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvF 281 (345)
.+++-+..+..+|.|++..++..|-...
T Consensus 166 -----~~~~~~~~L~~~l~d~~~~vr~~A~~aL 193 (201)
T 3ltj_A 166 -----GGERVRAAMEKLAETGTGFARKVAVNYL 193 (201)
T ss_dssp -----CSHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred -----CchhHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5677888888888888888887775443
No 56
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=53.62 E-value=94 Score=25.67 Aligned_cols=86 Identities=16% Similarity=0.111 Sum_probs=61.2
Q ss_pred HhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHH
Q 019167 171 LFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMK 250 (345)
Q Consensus 171 ~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~ 250 (345)
.+.+.+..++-+|-.-|..++..+=. ......+.+++.+++.-+|+.++..||.+
T Consensus 85 ~L~~~l~~~~~~vr~~a~~aL~~~~~--------------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~----------- 139 (211)
T 3ltm_A 85 PLIKALKDEDGWVRQSAAVALGQIGD--------------ERAVEPLIKALKDEDWFVRIAAAFALGEI----------- 139 (211)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHCC--------------GGGHHHHHHHTTCSSHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCc--------------HHHHHHHHHHHhCCCHHHHHHHHHHHHHc-----------
Confidence 33444555566666666655554421 12334556678899999999999999986
Q ss_pred HHhcchhhHHHHHHHhcCCcccchhhhhhhhhhh
Q 019167 251 RYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVF 284 (345)
Q Consensus 251 ~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvF 284 (345)
.+++-+..+..+|.|++..++..|...+.-+
T Consensus 140 ---~~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 140 ---GDERAVEPLIKALKDEDGWVRQSAADALGEI 170 (211)
T ss_dssp ---CCGGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 3567788899999999999999998877765
No 57
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=53.14 E-value=1.7e+02 Score=30.92 Aligned_cols=101 Identities=8% Similarity=0.042 Sum_probs=62.5
Q ss_pred CCchhhhhHHHHHHHHhhcccCC-----ccchhHHhhh-cHhHHHHHHhcccCcchhhhhhHHHHHHhhhhHHHHHHhcc
Q 019167 93 LGWEARKDLVHCWSILLKQKVDS-----TYCCVQFIEN-HFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILES 166 (345)
Q Consensus 93 L~fE~RKdv~~If~~llr~~~~~-----~~p~v~Yl~~-~peil~~Ll~gY~~~dial~~G~mLRecik~e~la~~iL~~ 166 (345)
.+-+.|--++.++.+.+++.-.. ..|. +--.. +..++..|... .+.+.-..|..+...++++--.+ +.
T Consensus 49 ~~~~vR~~A~i~lkn~i~~~w~~~~~~~~l~~-~~k~~ik~~ll~~l~~~--~~~ir~~l~~~ia~ia~~d~p~~---Wp 122 (960)
T 1wa5_C 49 LPLSTRLAGALFFKNFIKRKWVDENGNHLLPA-NNVELIKKEIVPLMISL--PNNLQVQIGEAISSIADSDFPDR---WP 122 (960)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCH-HHHHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHSTTT---CT
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCcccCCCCCH-HHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhhCccc---hh
Confidence 46678888888888877764331 2221 11111 45566666653 35666677777776666643211 23
Q ss_pred hhHHHhhhhccCCCchhhhhhHHHHHHhhhcCh
Q 019167 167 ASFELFFKFVELPTFDVASDAFSTFKDLLTKHL 199 (345)
Q Consensus 167 ~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk 199 (345)
+.+..+++.++.++...--.|+.++.+++.+.+
T Consensus 123 ~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~~~ 155 (960)
T 1wa5_C 123 TLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWR 155 (960)
T ss_dssp THHHHHHTTCCSSCTTHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 455667777777777777778888888877543
No 58
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=51.53 E-value=82 Score=27.98 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=25.6
Q ss_pred HHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcch
Q 019167 101 LVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEV 142 (345)
Q Consensus 101 v~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~di 142 (345)
+...+.+++..+ +..+++.+||+.+..|..+-+.+..
T Consensus 74 ~l~CLkalmn~~-----~G~~~vl~~~~~i~~l~~~L~s~~~ 110 (233)
T 2f31_A 74 IIRCLKAFMNNK-----FGIKTMLETEEGILLLVRAMDPAVP 110 (233)
T ss_dssp HHHHHHHHTSSH-----HHHHHHHTSSSHHHHHHTTCCTTSH
T ss_pred HHHHHHHHhCCh-----HHHHHHHcCcHHHHHHHHHhCCCCc
Confidence 334444444444 3588999999999999988866654
No 59
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=50.53 E-value=17 Score=38.20 Aligned_cols=65 Identities=22% Similarity=0.281 Sum_probs=51.5
Q ss_pred HHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhh
Q 019167 216 LYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIF 281 (345)
Q Consensus 216 ~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvF 281 (345)
-.-.||++++|-+|.-|++||.-|+..|... +-...++.|.-+-.+|.+|.|++.-||=||-.+.
T Consensus 126 ~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~-~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL 190 (651)
T 3grl_A 126 LLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQ-VQQIILVSPMGVSRLMDLLADSREVIRNDGVLLL 190 (651)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHHHHSHHH-HHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHH
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHhcCcHH-HHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHH
Confidence 3446789999999999999999999976542 3333445889999999999999888888776544
No 60
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=50.48 E-value=1.8e+02 Score=28.08 Aligned_cols=138 Identities=10% Similarity=0.145 Sum_probs=82.0
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHh
Q 019167 44 EEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFI 123 (345)
Q Consensus 44 ee~~K~l~~mk~il~g~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl 123 (345)
+|..+.|..+|.++..|. .+|.|+.+.|=+..|+.....-+-+...-+..-|..++-+--| .+=+
T Consensus 133 ~~lr~aLfsLk~~~q~D~----------~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~G-----m~gv 197 (339)
T 3dad_A 133 PELRRSLFSLKQIFQEDK----------DLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDG-----MLGV 197 (339)
T ss_dssp HHHHHHHHHHHHHHHTCT----------THHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHH-----HHHH
T ss_pred HHHHHHHHHHHHHhhcch----------HHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhcccc-----ccch
Confidence 577788999999888655 4999999988888888888887766666666666665544221 2223
Q ss_pred hhcHhHHHHHHhcccC--cchhhhhhHHHHHHhhh-hHHHHHHhcch----------hHHHhhhhcc---CCCchhhhhh
Q 019167 124 ENHFELLDFLVVCYDN--KEVALHCGIMLRECIKF-PSLARYILESA----------SFELFFKFVE---LPTFDVASDA 187 (345)
Q Consensus 124 ~~~peil~~Ll~gY~~--~dial~~G~mLRecik~-e~la~~iL~~~----------~f~~fF~y~~---~~~FeiasDA 187 (345)
..||+.+..+..--.. +.+.-.+..+|.-++-+ |..+..+...- -+..+...++ .++=|+..-|
T Consensus 198 vs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~a 277 (339)
T 3dad_A 198 VAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYT 277 (339)
T ss_dssp HHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHH
T ss_pred hCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHHH
Confidence 4488888888664332 23333345555444433 22222222111 1345555554 5566666666
Q ss_pred HHHHHHhhh
Q 019167 188 FSTFKDLLT 196 (345)
Q Consensus 188 f~Tfkellt 196 (345)
++-+..+|.
T Consensus 278 mtLIN~lL~ 286 (339)
T 3dad_A 278 VTLINKTLA 286 (339)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 665555554
No 61
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=48.56 E-value=73 Score=30.78 Aligned_cols=135 Identities=13% Similarity=0.162 Sum_probs=73.3
Q ss_pred CCChHHHHHHHHHHHHhccccchhhHHHhHHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhcHHHHHHhhC
Q 019167 11 PKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKL 90 (345)
Q Consensus 11 ~k~P~e~Vr~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~l~~mk~il~g~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l 90 (345)
.++|.++|+.+++.. .. +.+.+.|..++..|-.. | . ...+++...+ +..|+..|
T Consensus 65 ~~sP~~yi~~L~~~~------~~----------~kl~~~L~sL~v~Lrt~----~-~----sWV~~F~~~G-l~~Ll~iL 118 (383)
T 3eg5_B 65 SRSAMMYIQELRSGL------RD----------MHLLSCLESLRVSLTSH----P-V----SWVQTFGAEG-LASLLDIL 118 (383)
T ss_dssp CCCHHHHHHHHTTTC------CH----------HHHHHHHHHHHHHHHHS----C-H----HHHHHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHHHHhcc------cc----------hhHHHHHHHHHHHHhhC----c-c----HHHHHHHHcc-HHHHHHHH
Confidence 578999998886431 11 23456777777777322 2 2 3344444333 23333333
Q ss_pred CCC-----------CchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcchhhhhhHHHHHHhhhhHH
Q 019167 91 PIL-----------GWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSL 159 (345)
Q Consensus 91 ~~L-----------~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~dial~~G~mLRecik~e~l 159 (345)
..+ +.+-.-.+...+.+++..+. ..+++..||+.+..|..+-+.+...... .--|-|
T Consensus 119 ~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~-----G~~~vl~~~~~i~~l~~~L~s~~~~~~~-------~aleLL 186 (383)
T 3eg5_B 119 KRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKF-----GIKTMLETEEGILLLVRAMDPAVPNMMI-------DAAKLL 186 (383)
T ss_dssp HHHHTCC-------CHHHHHHHHHHHHHHTSSHH-----HHHHHHTCSSHHHHHHHTCCTTSHHHHH-------HHHHHH
T ss_pred HHHhhccccccchhhHHHHHHHHHHHHHHhcchh-----hHHHHHcChHHHHHHHHHhCCCchHHHH-------HHHHHH
Confidence 322 22222234455555555554 4889999999999999987655532111 011333
Q ss_pred HHHHhcchhHHHhhhhccCCC-chhhhhhHHHHHH
Q 019167 160 ARYILESASFELFFKFVELPT-FDVASDAFSTFKD 193 (345)
Q Consensus 160 a~~iL~~~~f~~fF~y~~~~~-FeiasDAf~Tfke 193 (345)
+...++++ ..+ ++..-+|+..+++
T Consensus 187 ~~lc~~~~----------~~gG~~~VL~Al~~~~~ 211 (383)
T 3eg5_B 187 SALCILPQ----------PEDMNERVLEAMTERAE 211 (383)
T ss_dssp HHHHTCCS----------STTHHHHHHHHHHHHHH
T ss_pred HHHHhCcC----------cCCcHHHHHHHHHHHHH
Confidence 43333331 123 7777788887776
No 62
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=48.53 E-value=87 Score=33.61 Aligned_cols=240 Identities=13% Similarity=0.174 Sum_probs=139.0
Q ss_pred HHHhhcHHHHHHhhCCCCCch---hhhhHHHHHHHHhhcccCCccchhHH--hhhcHhHHHHHHhcccCc----------
Q 019167 76 EVCKEDVLILLVHKLPILGWE---ARKDLVHCWSILLKQKVDSTYCCVQF--IENHFELLDFLVVCYDNK---------- 140 (345)
Q Consensus 76 ei~~~dll~~Li~~l~~L~fE---~RKdv~~If~~llr~~~~~~~p~v~Y--l~~~peil~~Ll~gY~~~---------- 140 (345)
.+.+.+.+..|+..+..-+.. .|..+++..++++--. +.......| +..-|-++.+|-.+-+.+
T Consensus 493 ~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~-np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~ 571 (778)
T 3opb_A 493 QLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFT-NPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQI 571 (778)
T ss_dssp HHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTS-CHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCC
T ss_pred HHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcC-CHHHHcCCCccccchHHHHHHcCCCCCcccccccccccc
Confidence 345567788888888777655 6777877777766311 100000001 011122222221111110
Q ss_pred ------chhhhhhHHHHHHhhh----hHHHHHHhcchhHH-HhhhhccCCCchhhhhhHHHHHHhhhcChhhH-HHHHHh
Q 019167 141 ------EVALHCGIMLRECIKF----PSLARYILESASFE-LFFKFVELPTFDVASDAFSTFKDLLTKHLTVV-SEYLTA 208 (345)
Q Consensus 141 ------dial~~G~mLRecik~----e~la~~iL~~~~f~-~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lv-aefl~~ 208 (345)
+.++..+++- .-. |.+.+.|+..+..| .+.+++...+=.|...|..++--+.. ++..+ ++|+..
T Consensus 572 ~~l~~feAL~ALTNLA---s~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~-~~e~i~~k~~~~ 647 (778)
T 3opb_A 572 KLTDNYEALLALTNLA---SSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMS-HPLTIAAKFFNL 647 (778)
T ss_dssp CHHHHHHHHHHHHHHH---HCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHT-SGGGTGGGTSCC
T ss_pred cHHHHHHHHHHHHHHh---cCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhC-CcHHHHHHHHhh
Confidence 1112222221 111 34556566653344 44466777777888888888877765 66654 577542
Q ss_pred hHHH---HHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcC--Ccccchhhhhhhhh-
Q 019167 209 HYDE---FFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKD--SSKNIQISAFHIFK- 282 (345)
Q Consensus 209 Nyd~---Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d--~sk~Iq~EAFhvFK- 282 (345)
.-++ =+.-.-.|+.+++.-|||-+.-.|+-+-. ++-.+....+..++-+..+..+|++ +...+|.-|-.++.
T Consensus 648 ~~~~~~~rL~lLV~Ll~s~D~~~r~AAagALAnLts--~~~~ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~N 725 (778)
T 3opb_A 648 ENPQSLRNFNILVKLLQLSDVESQRAVAAIFANIAT--TIPLIAKELLTKKELIENAIQVFADQIDDIELRQRLLMLFFG 725 (778)
T ss_dssp SSHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHH--HCHHHHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred cCchhhccHHHHHHHHcCCCHHHHHHHHHHHHHhcC--CChHHHHHHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 2122 13455688999999999999988888743 3445556667777899999999999 77888888777665
Q ss_pred hh-hcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCCCCcccH
Q 019167 283 VF-VANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFE 324 (345)
Q Consensus 283 vF-VANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~~DeqF~ 324 (345)
++ +|--+.+......+.+|+...-.+..-...+. .|++|.
T Consensus 726 L~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lk~~~--~~~e~~ 766 (778)
T 3opb_A 726 LFEVIPDNGTNEVYPLLQENQKLKDALNMSLKRGD--SGPEFS 766 (778)
T ss_dssp HHTTCCSTTTTSCCHHHHSCHHHHHHHHHHHSSSS--SCSSTT
T ss_pred HHHhhccCCChHHHHHHhcChHHHHHHHHHHhCCC--chHHHH
Confidence 44 45446666777777878654433333333333 566653
No 63
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=48.38 E-value=2.2e+02 Score=28.50 Aligned_cols=46 Identities=4% Similarity=0.125 Sum_probs=28.6
Q ss_pred hhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhh
Q 019167 174 KFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKL 220 (345)
Q Consensus 174 ~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~L 220 (345)
+.+..++-.|.+.|...+.++...+++. .+.+....+.++....++
T Consensus 186 ~lL~D~d~~V~~~Al~~L~~i~~~~~~~-~~~~~~~v~~l~~~L~~~ 231 (618)
T 1w63_A 186 NLLNEKNHGVLHTSVVLLTEMCERSPDM-LAHFRKLVPQLVRILKNL 231 (618)
T ss_dssp TSTTCCCHHHHHHHHHHHHHHCCSHHHH-HHHHHTTHHHHHHHHHHH
T ss_pred HHhCCCCHhHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHHHH
Confidence 3455778889999999999987655443 333344444455444443
No 64
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=47.28 E-value=2.5e+02 Score=30.22 Aligned_cols=149 Identities=12% Similarity=0.136 Sum_probs=78.8
Q ss_pred cHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCc----chhhhhhHHHHHHhh-
Q 019167 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNK----EVALHCGIMLRECIK- 155 (345)
Q Consensus 81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~----dial~~G~mLRecik- 155 (345)
.++..++..+..=+...|..+...++.+.....+. + ..|+ ++++..++..-.++ ++...+-..+...++
T Consensus 434 ~ll~~l~~~l~~~~~~vr~~~~~~L~~l~~~~~~~-l--~~~l---~~ll~~l~~~L~d~~~~~~v~~~a~~~l~~~~~~ 507 (1230)
T 1u6g_C 434 NIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGA-L--TQHI---PVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCN 507 (1230)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTT-T--GGGH---HHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHHchhh-h--HHHH---HHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHh
Confidence 34445555577777777877777777776653221 1 1233 55555555544443 322222222222221
Q ss_pred --hhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcCh-------hhHHHHHHhhHHHHHHHHHhhh--cCC
Q 019167 156 --FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHL-------TVVSEYLTAHYDEFFDLYEKLL--TSS 224 (345)
Q Consensus 156 --~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk-------~lvaefl~~Nyd~Ff~~~n~LL--~s~ 224 (345)
.+.+..++ .+.+-.++..++.++..|.+.|..++.++...-. .-...| ++.++..+-..+ .+.
T Consensus 508 ~~~~~~~~~l--~~llp~L~~~l~d~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~----~~~ll~~ll~~l~~~d~ 581 (1230)
T 1u6g_C 508 HSPQVFHPHV--QALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPY----IKDLFTCTIKRLKAADI 581 (1230)
T ss_dssp SCGGGGHHHH--TTTHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCCSSSCCCCCCHHH----HHHHHHHHHHHHSCSSS
T ss_pred CCHHHHHhHH--HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCcccccccchHHH----HHHHHHHHHHHHhccCC
Confidence 11111111 1233445556778888998888888888763211 112233 334444444444 567
Q ss_pred CceehhhhhhhhHHHhc
Q 019167 225 NYVTRRQSLKLLSEFLL 241 (345)
Q Consensus 225 NYVTkRQSLKLLgelLl 241 (345)
++-.|..++..||.+..
T Consensus 582 ~~~vr~~a~~~lg~L~~ 598 (1230)
T 1u6g_C 582 DQEVKERAISCMGQIIC 598 (1230)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 77778788888887764
No 65
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=45.06 E-value=62 Score=31.38 Aligned_cols=106 Identities=15% Similarity=0.209 Sum_probs=82.2
Q ss_pred cCCCchhhhhhHHHHHHhhhcChhhHHHHHHhh-HHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcc
Q 019167 177 ELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAH-YDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILE 255 (345)
Q Consensus 177 ~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~N-yd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~ 255 (345)
..++=+.--+|.-+++.++..-+..|.||+..+ .+..+.....- ++|| .-.+|+-|++|++ +..=|+--|++
T Consensus 128 ~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~--~gN~--q~Y~L~AL~~LM~---~v~Gm~gvvs~ 200 (339)
T 3dad_A 128 YSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAA--DHNY--QSYILRALGQLML---FVDGMLGVVAH 200 (339)
T ss_dssp HHCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTS--CHHH--HHHHHHHHHHHTT---SHHHHHHHHHC
T ss_pred hcCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhc--ChHH--HHHHHHHHHHHHh---ccccccchhCC
Confidence 344555567888899998988999999999865 23333322221 4555 6678999999996 56667777889
Q ss_pred hhhHHHHHHHhcCCcccchhhhhhhhhhhhcCCC
Q 019167 256 VRFLKVMMTLLKDSSKNIQISAFHIFKVFVANPN 289 (345)
Q Consensus 256 ~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVANP~ 289 (345)
++.++.+-.++.+...+|.=-|--++.+||-+..
T Consensus 201 ~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se 234 (339)
T 3dad_A 201 SDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSE 234 (339)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCc
Confidence 9999999999999888898889999999998753
No 66
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=44.41 E-value=1e+02 Score=29.78 Aligned_cols=102 Identities=14% Similarity=0.202 Sum_probs=55.6
Q ss_pred CCCChHHHHHHHHHHHHhccccchhhHHHhHHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhcHHHHHHhh
Q 019167 10 RPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHK 89 (345)
Q Consensus 10 ~~k~P~e~Vr~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~l~~mk~il~g~~e~ep~~e~~~qL~~ei~~~dll~~Li~~ 89 (345)
++.+|..+|+.+++.. +. +.+.+.|..++..|-..+ . .-.+++...+ +..|+..
T Consensus 2 ~~~~P~~yv~~L~~~~------~~----------~~~~~~L~~L~v~Lrt~~-----~----~Wv~~F~~~G-l~~Ll~~ 55 (386)
T 2bnx_A 2 SSRSAMMYIQELRSGL------RD----------MHLLSCLESLRVSLNNNP-----V----SWVQTFGAEG-LASLLDI 55 (386)
T ss_dssp -CCCHHHHHHHHTSCC------CH----------HHHHHHHHHHHHHHHHSC-----H----HHHHHHHHHH-HHHHHHH
T ss_pred CCCCHHHHHHHHHhcc------ch----------HHHHHHHHHHhHHHhcCC-----c----HHHHHHHHhH-HHHHHHH
Confidence 3789999999987632 11 125667777777774432 2 2333443332 2223333
Q ss_pred CCCC---C--------chhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHhcccCcch
Q 019167 90 LPIL---G--------WEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEV 142 (345)
Q Consensus 90 l~~L---~--------fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~gY~~~di 142 (345)
|..+ . .+---.+..++.++++.+. ..+++..||+.+..|..+-+.+..
T Consensus 56 L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~~-----Gl~~vl~~~~~i~~l~~sL~s~~~ 114 (386)
T 2bnx_A 56 LKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKF-----GIKTMLETEEGILLLVRAMDPAVP 114 (386)
T ss_dssp HHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHH-----HHHHHHHSSSHHHHHHHTCCTTSH
T ss_pred HHHHHhcccccccchhHHHHHHHHHHHHHHhCCHH-----HHHHHHcCcHHHHHHHHHhCCCCc
Confidence 3222 1 1111123333444444443 578899999999999888765544
No 67
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=42.93 E-value=2.8e+02 Score=28.04 Aligned_cols=85 Identities=15% Similarity=0.122 Sum_probs=45.2
Q ss_pred HHHHHHHHhccccchhhHHHhHHHHHHHHHHHHHhhhhhcCCCCCCCCH----HHHHHHHHHHHh----hcHHHHHHhhC
Q 019167 19 KATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNA----DQVLQLATEVCK----EDVLILLVHKL 90 (345)
Q Consensus 19 r~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~l~~mk~il~g~~e~ep~~----e~~~qL~~ei~~----~dll~~Li~~l 90 (345)
|.+++.+..++...+. +.-.+-+.+-+..+|.-+.+++. .++ +.+..|..-+.. +.++...+..+
T Consensus 11 ~~l~~~I~~ir~~~~~-----~~e~~~i~~E~~~ir~~~~~~~~--~~~~~k~~~l~Kli~l~~~G~d~s~~~~~vvkl~ 83 (621)
T 2vgl_A 11 RGLAVFISDIRNCKSK-----EAEIKRINKELANIRSKFKGDKA--LDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 83 (621)
T ss_dssp HHHHHHHHHHHHCSSH-----HHHHHHHHHHHHHHHHHHHSSSC--CCHHHHHHHHHHHHHHHHHSCCCCSCHHHHHHGG
T ss_pred hhHHHHHHHHHcCCCH-----HHHHHHHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHh
Confidence 4555555555544321 11123466667778887765321 233 233333332222 13567777888
Q ss_pred CCCCchhhhhHHHHHHHHhh
Q 019167 91 PILGWEARKDLVHCWSILLK 110 (345)
Q Consensus 91 ~~L~fE~RKdv~~If~~llr 110 (345)
+.=+++.||-+..-+..+..
T Consensus 84 ~s~~~~~Krl~YL~l~~~~~ 103 (621)
T 2vgl_A 84 SSNRYTEKQIGYLFISVLVN 103 (621)
T ss_dssp GCSCHHHHHHHHHHHHHSCC
T ss_pred cCCCHHHHHHHHHHHHHHcc
Confidence 88888888776555554443
No 68
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=42.67 E-value=2.6e+02 Score=27.54 Aligned_cols=200 Identities=8% Similarity=0.061 Sum_probs=116.1
Q ss_pred hcHHHHHHhhCCCCCchhhhhHHHHHHHHhhcccCCccchhHHhhh---cHhHHHHHHhcccCcchhhhhhHHHHHHhh-
Q 019167 80 EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN---HFELLDFLVVCYDNKEVALHCGIMLRECIK- 155 (345)
Q Consensus 80 ~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~---~peil~~Ll~gY~~~dial~~G~mLRecik- 155 (345)
.+.+..|+..|..=+-+.+.+++....++-... ....-+.+.. =|-++..|+++- ++++--.+-..|+.+..
T Consensus 242 ~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~---~~~~k~~I~~~GaI~~LV~lLl~s~-~~~v~~~A~~aL~nLs~~ 317 (458)
T 3nmz_A 242 KGCMRALVAQLKSESEDLQQVIASVLRNLSWRA---DVNSKKTLREVGSVKALMECALEVK-KESTLKSVLSALWNLSAH 317 (458)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSC---CHHHHHHHHHTTHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCC---CHHHHHHHHHcCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHccC
Confidence 345677777777655666666666665543210 0011122222 144444444322 33333333334444443
Q ss_pred hhHHHHHHh-cchhHHHhhhhccCCCc----hhhhhhHHHHHHhh---hcChhhHHHHHHhhHHHHHHHHHhhhcCCCce
Q 019167 156 FPSLARYIL-ESASFELFFKFVELPTF----DVASDAFSTFKDLL---TKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYV 227 (345)
Q Consensus 156 ~e~la~~iL-~~~~f~~fF~y~~~~~F----eiasDAf~Tfkell---t~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYV 227 (345)
.+.....+. ....+--+.+.+..+.= +|..+|..+++-+= +.+..........+ .+...-+||.+++.-
T Consensus 318 ~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G---~i~~Lv~LL~~~~~~ 394 (458)
T 3nmz_A 318 CTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENN---CLQTLLQHLKSHSLT 394 (458)
T ss_dssp CHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTT---HHHHHHHHSSCSCHH
T ss_pred CHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcc---cHHHHHHHHcCCChH
Confidence 222222222 45555555555544332 46666666666543 35555555555544 356677899999999
Q ss_pred ehhhhhhhhHHHhc-CCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhh-cCCCC
Q 019167 228 TRRQSLKLLSEFLL-EPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFV-ANPNK 290 (345)
Q Consensus 228 TkRQSLKLLgelLl-dr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFV-ANP~K 290 (345)
+++++...|+.+-. ++.| ..+|-+..-+..+..||++++..++-+|--...=.. -||.|
T Consensus 395 v~~~A~~aL~nLa~~~~~~----~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL~~~~p~k 455 (458)
T 3nmz_A 395 IVSNACGTLWNLSARNPKD----QEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAK 455 (458)
T ss_dssp HHHHHHHHHHHHHSSCHHH----HHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHHHHHHHcCCHHH----HHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHhh
Confidence 99999999999974 3332 456666778899999999999999988877666444 45655
No 69
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=40.68 E-value=91 Score=30.02 Aligned_cols=112 Identities=9% Similarity=0.013 Sum_probs=81.6
Q ss_pred HhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHH
Q 019167 171 LFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMK 250 (345)
Q Consensus 171 ~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~ 250 (345)
.+..++..++-++-..|..+++.+...+...-...... ..+...-++|.|++--.++.+...|+.|..+ |... .
T Consensus 6 ~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~---g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~--~~~~-k 79 (457)
T 1xm9_A 6 KAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQL---GGICKLVDLLRSPNQNVQQAAAGALRNLVFR--STTN-K 79 (457)
T ss_dssp HHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHT---THHHHHHHHTTSSCHHHHHHHHHHHHHHHSS--CHHH-H
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHc---CCHHHHHHHHcCCCHHHHHHHHHHHHHHhcC--CHHH-H
Confidence 44556667777888999999999765444333344433 3466777899999999999999999999985 3332 2
Q ss_pred HHhcchhhHHHHHHHhc-CCcccchhhhhhhhhhhhcCC
Q 019167 251 RYILEVRFLKVMMTLLK-DSSKNIQISAFHIFKVFVANP 288 (345)
Q Consensus 251 ~Yi~~~~NLkliM~LL~-d~sk~Iq~EAFhvFKvFVANP 288 (345)
..|.+..-+..++.+|+ +.+..+|.+|-...--...+|
T Consensus 80 ~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~ 118 (457)
T 1xm9_A 80 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD 118 (457)
T ss_dssp HHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCH
Confidence 33445577899999999 778889999987776555553
No 70
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=37.76 E-value=4.5e+02 Score=28.96 Aligned_cols=178 Identities=17% Similarity=0.250 Sum_probs=101.7
Q ss_pred ccCcchhhhhhHHHHHHhhhhHHHHHHhc--chhHHHhhhh----ccCCCchhhhhhHHHHHHhhhc---ChhhHHHHHH
Q 019167 137 YDNKEVALHCGIMLRECIKFPSLARYILE--SASFELFFKF----VELPTFDVASDAFSTFKDLLTK---HLTVVSEYLT 207 (345)
Q Consensus 137 Y~~~dial~~G~mLRecik~e~la~~iL~--~~~f~~fF~y----~~~~~FeiasDAf~Tfkellt~---Hk~lvaefl~ 207 (345)
-+.||.-...=..||.++.|= =..+|. .+.|..+++- +..+.-+|+.-++.++.+++.+ +...+.+|..
T Consensus 841 ~~~Pe~r~~ff~ll~~~~~~~--f~~l~~l~~~~~~~~i~~i~wa~kh~~r~i~~~~l~~~~~ll~~~~~~~~~~~~F~~ 918 (1073)
T 3gjx_A 841 EEYPEHRTNFFLLLQAVNSHC--FPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQ 918 (1073)
T ss_dssp SSCHHHHHHHHHHHHHHHHHC--GGGTTTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHHHHH--hHHHHcCCHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHhhcChHHHHHHHH
Confidence 346777777777777777661 122443 4566767754 3789999999999999999874 5567779999
Q ss_pred hhHHHHHHHHHhhhcCCCcee--hhhh--hhhhHHHhcC------------CCCHHHHHHHhcchhhHHHHHHHhcCCcc
Q 019167 208 AHYDEFFDLYEKLLTSSNYVT--RRQS--LKLLSEFLLE------------PPNSHIMKRYILEVRFLKVMMTLLKDSSK 271 (345)
Q Consensus 208 ~Nyd~Ff~~~n~LL~s~NYVT--kRQS--LKLLgelLld------------r~N~~vM~~Yi~~~~NLkliM~LL~d~sk 271 (345)
+.|-.+....-..+..+..-. +.|+ |.-|-.+..+ ++|...+..|++ ++|...-+
T Consensus 919 ~~~~~~~~~i~~v~td~~h~~~f~~q~~il~~l~~~~~~~~i~~~l~~~~~~~n~~~~~~~~~---------~~l~~~fp 989 (1073)
T 3gjx_A 919 TYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTPLNPGNPVNNQMFIQDYVA---------NLLKSAFP 989 (1073)
T ss_dssp HHHHHHHHHHHHHHTCTTCGGGHHHHHHHHHHHHHHHTTTCCSCSSSCTTTTCHHHHHHHHHH---------HHHHHHCT
T ss_pred HHHHHHHHHHHHHHhCchHhhhhhHHHHHHHHHHHHHHcCCccccccccCCCccHHHHHHHHH---------HHHHHhCC
Confidence 999888777665555544331 2232 2223333221 125555555554 34433333
Q ss_pred cc---hhhhhhhhhhhhcCCCCChHHHHHHHHhHHHHHHHHhccCCCCCCCCcccHHHHHHHHHH
Q 019167 272 NI---QISAFHIFKVFVANPNKPHEVKVILAKNHEKLLELLRNLSVGKGADDDQFEEEKELIMKE 333 (345)
Q Consensus 272 ~I---q~EAFhvFKvFVANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~~~DeqF~dEK~~lI~~ 333 (345)
++ |++.|+. -+|-.+- .+..+..-| |+ ++.=++.|..+. .++-|.+||+.-+++
T Consensus 990 ~~~~~qi~~fv~-~l~~~~~-d~~~f~~~l---rD-Fli~~ke~~~~~--~~~l~~~~~~~~~~~ 1046 (1073)
T 3gjx_A 990 HLQDAQVKLFVT-GLFSLNQ-DIPAFKEHL---RD-FLVQIKEFAGED--TSDLFLEERETALRQ 1046 (1073)
T ss_dssp TSCHHHHHHHHH-HHHHSTT-CHHHHHHHH---HH-HHHHHTSCCTTT--CCTTCTTHHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHHhcC-CHHHHHHHH---HH-HHHHHHHHcCCC--cHHHhHHHHHHHHHH
Confidence 33 6777752 1222211 112222221 11 222345676654 456899998887654
No 71
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=36.45 E-value=3.1e+02 Score=29.26 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=58.4
Q ss_pred cCcchhhhhhHHHHHHhhhhHHHHHHhc-ch-hHHHhhhh----ccCCCchhhhhhHHHHHHhhhcCh-----hhHHHHH
Q 019167 138 DNKEVALHCGIMLRECIKFPSLARYILE-SA-SFELFFKF----VELPTFDVASDAFSTFKDLLTKHL-----TVVSEYL 206 (345)
Q Consensus 138 ~~~dial~~G~mLRecik~e~la~~iL~-~~-~f~~fF~y----~~~~~FeiasDAf~Tfkellt~Hk-----~lvaefl 206 (345)
+.||+.-.+=.++..++++-. ..++. ++ .+..+++. +..+.-+++.-|...+.++++..+ ..+..|.
T Consensus 816 ~~pd~~~~~f~ll~~i~~~~~--~~l~~~~~~~~~~v~~~~~~al~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~f~ 893 (1049)
T 3m1i_C 816 EYPEHRVEFYKLLKVINEKSF--AAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEFH 893 (1049)
T ss_dssp SSHHHHHHHHHHHHHHHHHCT--HHHHHSCHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHhCH--HHHHcCCHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 356666666444444443211 22332 22 24444432 578999999999999999988543 4566787
Q ss_pred HhhHHHHHHHHHh-hhcCCCceehhhhhhhhHHHhc
Q 019167 207 TAHYDEFFDLYEK-LLTSSNYVTRRQSLKLLSEFLL 241 (345)
Q Consensus 207 ~~Nyd~Ff~~~n~-LL~s~NYVTkRQSLKLLgelLl 241 (345)
.+.|-.+....-. |..+. -|-+++...++|-
T Consensus 894 ~~~~~~l~~~~~~~l~~~~----h~s~~~~~~~~l~ 925 (1049)
T 3m1i_C 894 KNYFFIFVSETFFVLTDSD----HKSGFSKQALLLM 925 (1049)
T ss_dssp HHHHHHHHHHHHHHHHSTT----CGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcch----HhhhHHHHHHHHH
Confidence 7777776666554 44444 6666666655553
No 72
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=33.93 E-value=3.8e+02 Score=27.01 Aligned_cols=147 Identities=14% Similarity=0.204 Sum_probs=78.7
Q ss_pred hHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhhcC-CCcee-----------------h
Q 019167 168 SFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTS-SNYVT-----------------R 229 (345)
Q Consensus 168 ~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL~s-~NYVT-----------------k 229 (345)
.+..+.+|++..+.++..++...+..+ |+=+..+++|+++-.-+|+.. ++||. |
T Consensus 405 Iv~eL~~yl~~~d~~~~~~~v~~I~~l--------a~k~~~~~~~~v~~Ll~ll~~~~~~v~~ev~~~l~~ii~~~~~~~ 476 (621)
T 2vgl_A 405 IVAEMLSYLETADYSIREEIVLKVAIL--------AEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQ 476 (621)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHH--------HHHHCSSTHHHHHHHHHHHHHHGGGSCSHHHHHHHHHHGGGCSCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHH--------HHhcCCcHHHHHHHHHHHHHhhcccchHHHHHHHHHHHhCChhHH
Confidence 345666777766666666665544443 222235566777666665553 45543 2
Q ss_pred hhhhhhhHHHhcCCCCHHHHH--------HH---hcc-----h-hhHHHHHHHhcCCcccchhhhhh-hhhhhhcCCCCC
Q 019167 230 RQSLKLLSEFLLEPPNSHIMK--------RY---ILE-----V-RFLKVMMTLLKDSSKNIQISAFH-IFKVFVANPNKP 291 (345)
Q Consensus 230 RQSLKLLgelLldr~N~~vM~--------~Y---i~~-----~-~NLkliM~LL~d~sk~Iq~EAFh-vFKvFVANP~K~ 291 (345)
..+++-|-+.|.++.-...+. .| +.+ | +-|+.+.+-+.+.+..+|..+-. +.|+|+..|.-
T Consensus 477 ~~~~~~l~~~l~~~~~~~~li~~~~wilGEy~~~~~~~~~~~p~~~l~~l~~~~~~~~~~v~~~~Lta~~Kl~~~~p~~- 555 (621)
T 2vgl_A 477 GYAAKTVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLHSKFHLCSVPTRALLLSTYIKFVNLFPEV- 555 (621)
T ss_dssp HHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHTHHHHSSTTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHCGGG-
T ss_pred HHHHHHHHHHHcCccchHHHHHHHHHHhcchHHHhcccCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHChHH-
Confidence 234445555666554433332 12 222 1 44667766667777777666554 35777766642
Q ss_pred hHHHHHHHHhHHHHHHHHhccCC--CCCCCCcccHHHHHHHHHHHhhc
Q 019167 292 HEVKVILAKNHEKLLELLRNLSV--GKGADDDQFEEEKELIMKEIERV 337 (345)
Q Consensus 292 ~~I~~IL~~Nr~kLl~fl~~f~~--d~~~~DeqF~dEK~~lI~~I~~L 337 (345)
++.+...|..+.. +. ++| ..+|++....+-+.
T Consensus 556 ----------~~~i~~~l~~~~~~~~~--d~e--vrdRA~~y~~Ll~~ 589 (621)
T 2vgl_A 556 ----------KATIQDVLRSDSQLKNA--DVE--LQQRAVEYLRLSTV 589 (621)
T ss_dssp ----------HHHHHHHHSSHHHHSCS--SHH--HHHHHHHHHHHHHS
T ss_pred ----------HHHHHHHHHHHhcCCCC--CHH--HHHHHHHHHHHHcc
Confidence 3445555555554 32 222 34666666555443
No 73
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=30.12 E-value=57 Score=28.40 Aligned_cols=51 Identities=16% Similarity=0.099 Sum_probs=31.0
Q ss_pred HHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhh
Q 019167 217 YEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIF 281 (345)
Q Consensus 217 ~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvF 281 (345)
.-++|.++|.-+|++++..||.+= +++-+..++.+|.|++..++..|-..+
T Consensus 28 L~~~L~~~~~~vr~~A~~~L~~~~--------------~~~~~~~L~~~l~d~~~~vR~~A~~aL 78 (280)
T 1oyz_A 28 LFRLLDDHNSLKRISSARVLQLRG--------------GQDAVRLAIEFCSDKNYIRRDIGAFIL 78 (280)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHC--------------CHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHccC--------------CchHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 345666777777777777777652 344555566666666666665555444
No 74
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=30.10 E-value=2.6e+02 Score=26.77 Aligned_cols=130 Identities=12% Similarity=0.077 Sum_probs=90.8
Q ss_pred HhHHHHHHhcccCcchhhhhhHHHHHHhh-hhHHHHHHhcchhHHHhhhhccCCCchhhhhhHHHHHHhhhcChhhHHHH
Q 019167 127 FELLDFLVVCYDNKEVALHCGIMLRECIK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEY 205 (345)
Q Consensus 127 peil~~Ll~gY~~~dial~~G~mLRecik-~e~la~~iL~~~~f~~fF~y~~~~~FeiasDAf~Tfkellt~Hk~lvaef 205 (345)
|.++..|-++ ++++-..+-..|+.... .+.....+.....+-.+.+.+..++=++...|..+++.+...+...-...
T Consensus 5 ~~lv~~L~s~--~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 5 PKAVQYLSSQ--DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp HHHHHHHHSS--CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHCCC--CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3444444433 56666666677777444 44455477778888888999999998999999999998876545444443
Q ss_pred HHhhHHHHHHHHHhhhc-CCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHh
Q 019167 206 LTAHYDEFFDLYEKLLT-SSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLL 266 (345)
Q Consensus 206 l~~Nyd~Ff~~~n~LL~-s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL 266 (345)
.... -+..+-+||. +++.-+++++.-.|+.|-.+..|...+ -+ .-+..++.+|
T Consensus 83 ~~~G---~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i----~~-g~i~~Lv~ll 136 (457)
T 1xm9_A 83 RRQN---GIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEEL----IA-DALPVLADRV 136 (457)
T ss_dssp HHTT---CHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHH----HH-HHHHHHHHHT
T ss_pred HHcC---CHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHH----Hh-ccHHHHHHHH
Confidence 3332 2445567888 889999999999999999986665533 23 6677777788
No 75
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=28.59 E-value=57 Score=29.07 Aligned_cols=111 Identities=10% Similarity=0.165 Sum_probs=80.3
Q ss_pred HhhhhccCCCchhhhhhHHHHHH-hhhcChhhHHHHHHhhHHHHHHHHHhhh-cCCCceehhhhhhhhHHHhcCCCCHHH
Q 019167 171 LFFKFVELPTFDVASDAFSTFKD-LLTKHLTVVSEYLTAHYDEFFDLYEKLL-TSSNYVTRRQSLKLLSEFLLEPPNSHI 248 (345)
Q Consensus 171 ~fF~y~~~~~FeiasDAf~Tfke-llt~Hk~lvaefl~~Nyd~Ff~~~n~LL-~s~NYVTkRQSLKLLgelLldr~N~~v 248 (345)
.|.+.++.++..---+|...+.. ++..++.+... ..+|..++....+.| ...|-+.+..+++.||.|-..=.+ .-
T Consensus 20 ~f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~--~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~-~~ 96 (249)
T 2qk1_A 20 DFQERITSSKWKDRVEALEEFWDSVLSQTKKLKST--SQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKT-PG 96 (249)
T ss_dssp THHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCT--TCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT-TT
T ss_pred hHHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccC--cccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc-cc
Confidence 35566788888888889988888 88766655410 346888898898888 789999999999999998731110 01
Q ss_pred HH-HHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhc
Q 019167 249 MK-RYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVA 286 (345)
Q Consensus 249 M~-~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVA 286 (345)
+. .|... -|-.++..|+|+.+.++-.|.--..-|+.
T Consensus 97 f~~~y~~~--llp~ll~~l~dkk~~V~~aa~~al~~i~~ 133 (249)
T 2qk1_A 97 FSKDYVSL--VFTPLLDRTKEKKPSVIEAIRKALLTICK 133 (249)
T ss_dssp SCHHHHHH--HHHHHHHGGGCCCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 12 44433 46788889999999998777766665654
No 76
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=27.64 E-value=3.9e+02 Score=25.07 Aligned_cols=196 Identities=9% Similarity=0.070 Sum_probs=118.8
Q ss_pred hcHHHHHHhhCCCCCchhhhhHHHHHHHHhhc-ccCCccchhHHhhh---cHhHHHHHHhcccCcchhhhhhHHHHHHhh
Q 019167 80 EDVLILLVHKLPILGWEARKDLVHCWSILLKQ-KVDSTYCCVQFIEN---HFELLDFLVVCYDNKEVALHCGIMLRECIK 155 (345)
Q Consensus 80 ~dll~~Li~~l~~L~fE~RKdv~~If~~llr~-~~~~~~p~v~Yl~~---~peil~~Ll~gY~~~dial~~G~mLRecik 155 (345)
.+.+..|+..|..=+-+.+..++....++-.. ... .-+.+.+ =|-++..|.++. ++++--.+-..|+.+..
T Consensus 126 ~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~----~k~~i~~~G~Ip~Lv~lL~~~~-~~~~~~~A~~aL~nLs~ 200 (354)
T 3nmw_A 126 KGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVN----SKKTLREVGSVKALMECALEVK-KESTLKSVLSALWNLSA 200 (354)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHH----HHHHHHHTTHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHH----HHHHHHHCCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHHc
Confidence 45688888888766677788877777766432 111 1122222 255555555432 33333333344555544
Q ss_pred -hhHHHHHHh-cchhHHHhhhhccCCCc----hhhhhhHHHHHHhh---hcChhhHHHHHHhhHHHHHHHHHhhhcCCCc
Q 019167 156 -FPSLARYIL-ESASFELFFKFVELPTF----DVASDAFSTFKDLL---TKHLTVVSEYLTAHYDEFFDLYEKLLTSSNY 226 (345)
Q Consensus 156 -~e~la~~iL-~~~~f~~fF~y~~~~~F----eiasDAf~Tfkell---t~Hk~lvaefl~~Nyd~Ff~~~n~LL~s~NY 226 (345)
.+.....+. ....+-.+.+.+..++- +|..+|..+++-+= +.+..........+ .+...-+||.+++.
T Consensus 201 ~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g---~i~~Lv~lL~~~~~ 277 (354)
T 3nmw_A 201 HCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENN---CLQTLLQHLKSHSL 277 (354)
T ss_dssp TCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTT---HHHHHHHHTTCSCH
T ss_pred cChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcC---CHHHHHHHHcCCCh
Confidence 323323333 55555555555554432 46666666665542 24554444444333 45677789999999
Q ss_pred eehhhhhhhhHHHhc-CCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhhhhcC
Q 019167 227 VTRRQSLKLLSEFLL-EPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKVFVAN 287 (345)
Q Consensus 227 VTkRQSLKLLgelLl-dr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKvFVAN 287 (345)
-+++.+...|+.+-. ++.+ ..+|-+..-+..+..||++++..++-+|--...-..++
T Consensus 278 ~v~~~A~~aL~nLa~~~~~~----~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~~~ 335 (354)
T 3nmw_A 278 TIVSNACGTLWNLSARNPKD----QEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMAN 335 (354)
T ss_dssp HHHHHHHHHHHHHTSSCHHH----HHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCHHH----HHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcC
Confidence 999999999999974 3333 34566667789999999999999998887766655544
No 77
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.45 E-value=1.3e+02 Score=24.65 Aligned_cols=45 Identities=13% Similarity=0.199 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhcHHH
Q 019167 40 EKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLI 84 (345)
Q Consensus 40 ~k~~ee~~K~l~~mk~il~g~~e~ep~~e~~~qL~~ei~~~dll~ 84 (345)
++..+|++|-|..+-+-|...+=.++.-+...+|++++-+.|+-.
T Consensus 35 k~~~~D~~KRL~~LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~~ 79 (118)
T 2yru_A 35 KQVCDDISRRLALLREQWAGGKLSIPVKKRMALLVQELLHHQWDA 79 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHH
Confidence 455799999999998888765545566778889999998777543
No 78
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=25.78 E-value=1.8e+02 Score=31.18 Aligned_cols=163 Identities=17% Similarity=0.192 Sum_probs=89.5
Q ss_pred chhhhhHHHHHHHHhhcccCCccchhHHhhhcHhHHHHHHh--cccCcchhhhhhHHHHHHhhhhHHHH--HH----hc-
Q 019167 95 WEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVV--CYDNKEVALHCGIMLRECIKFPSLAR--YI----LE- 165 (345)
Q Consensus 95 fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~Ll~--gY~~~dial~~G~mLRecik~e~la~--~i----L~- 165 (345)
|+..+++..+.+.+.++=.-+.-|.|.|+. .++..|+. +|+.+++.+.+-.+-.+|-..|.=.- .+ ++
T Consensus 124 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l---~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~i~~~~~~~ 200 (778)
T 3opb_A 124 FSNKDATIALLNELQIRIHYGEDTHVTYLL---SIILQLLNKFKYNFKEVRFLVKELILRISEDEVKSMMLIIFAELQSS 200 (778)
T ss_dssp CCSGGGGHHHHHHHHHHHHHTCSSCHHHHH---HHHHHHHHHSCCCSTTTTHHHHHHHTTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcCCCcchhHHH---HHHHHHHHHcCccccchhhHHHHhccccChhhhHHHHHHHHHHHHHh
Confidence 556667777777774442212223677876 34445555 57778876665555444433332111 11 11
Q ss_pred -chhH-HHhhhhccCCC--------chhhhhhHHHHHHhhhcChhhHHHHHHhhHHHHHHHHHhhh-cCCCceehhhhhh
Q 019167 166 -SASF-ELFFKFVELPT--------FDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLL-TSSNYVTRRQSLK 234 (345)
Q Consensus 166 -~~~f-~~fF~y~~~~~--------FeiasDAf~Tfkellt~Hk~lvaefl~~Nyd~Ff~~~n~LL-~s~NYVTkRQSLK 234 (345)
.+.| ..|-+|++.-. =+=-..+|+++..++.-.+.++|+-+.. +.|...+...+ +..+...-+..|+
T Consensus 201 ~~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~~~l~~lfPi~p~~~s~lfl~--e~~~~~l~~~~~~~~~~~~~~a~L~ 278 (778)
T 3opb_A 201 FQKDFDKAVVDFMSSLIVEAEIDVGNDPLSIIVKTLSELYPSLTTLCSEIFLT--KGLSKLFKKRVFEEQDLQFTKELLR 278 (778)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHTTTTHHHHHHHHST--TTHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHhcCCHHHHHHHHcc--ccHHHHHHHHHhcccchHHHHHHHH
Confidence 1122 22223443111 1222447888999999999999965543 23455555544 3344556678899
Q ss_pred hhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhc
Q 019167 235 LLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLK 267 (345)
Q Consensus 235 LLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~ 267 (345)
||+..-.|+.+. .|| ....+..+-.+++
T Consensus 279 lLsaACi~~~cR----~~I-~~~~~~~L~~~l~ 306 (778)
T 3opb_A 279 LLSSACIDETMR----TYI-TENYLQLLERSLN 306 (778)
T ss_dssp HHHHHCCSHHHH----HHH-HHHHHHHHHHHTT
T ss_pred HHHHHhCCcHHH----HHH-HHhHHHHHHHHhc
Confidence 999988877763 444 3444444445553
No 79
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=25.03 E-value=3.3e+02 Score=23.37 Aligned_cols=56 Identities=16% Similarity=0.129 Sum_probs=30.8
Q ss_pred HHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhh
Q 019167 216 LYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKV 283 (345)
Q Consensus 216 ~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKv 283 (345)
..-.++.+++.-.|+.++.-||.+= ..+++-+..+..+|.|++..++.+|....--
T Consensus 163 ~L~~~l~d~~~~vr~~a~~aL~~~~------------~~~~~~~~~L~~~l~d~~~~vR~~A~~aL~~ 218 (280)
T 1oyz_A 163 LLINLLKDPNGDVRNWAAFAININK------------YDNSDIRDCFVEMLQDKNEEVRIEAIIGLSY 218 (280)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHT------------CCCHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhhc------------cCcHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 3334455555555555555555431 0245556666677777777777776665543
No 80
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=24.52 E-value=66 Score=25.02 Aligned_cols=53 Identities=17% Similarity=0.113 Sum_probs=41.4
Q ss_pred HHHHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhh
Q 019167 214 FDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHI 280 (345)
Q Consensus 214 f~~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhv 280 (345)
.....++|.+++.-+|+.++.-||.+ .+++-+..+..+|+|++..++..|-..
T Consensus 75 ~~~L~~~L~d~~~~VR~~A~~aL~~~--------------~~~~a~~~L~~~l~d~~~~vr~~A~~a 127 (131)
T 1te4_A 75 VEPLIKLLEDDSGFVRSGAARSLEQI--------------GGERVRAAMEKLAETGTGFARKVAVNY 127 (131)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHH--------------CSHHHHHHHHHHTTSCCTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHh--------------CcHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 44455666788889999999999976 357778888899999988888777543
No 81
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=23.82 E-value=56 Score=25.49 Aligned_cols=54 Identities=17% Similarity=0.264 Sum_probs=41.0
Q ss_pred HHHhhhcCCCceehhhhhhhhHHHhcCCCCHHHHHHHhcchhhHHHHHHHhcCCcccchhhhhhhhhh
Q 019167 216 LYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKDSSKNIQISAFHIFKV 283 (345)
Q Consensus 216 ~~n~LL~s~NYVTkRQSLKLLgelLldr~N~~vM~~Yi~~~~NLkliM~LL~d~sk~Iq~EAFhvFKv 283 (345)
..-++|.+++.-.|+.++..||.+= +++-+..+..+|+|++..++.+|-...--
T Consensus 46 ~L~~~L~d~~~~vR~~A~~aL~~~~--------------~~~a~~~L~~~L~d~~~~VR~~A~~aL~~ 99 (131)
T 1te4_A 46 PLLESLSNEDWRIRGAAAWIIGNFQ--------------DERAVEPLIKLLEDDSGFVRSGAARSLEQ 99 (131)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHGGGC--------------SHHHHHHHHHHHHHCCTHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcC--------------CHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3345677788888888888888752 45667888889999999999998766543
No 82
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=21.19 E-value=2e+02 Score=26.15 Aligned_cols=71 Identities=14% Similarity=0.192 Sum_probs=45.7
Q ss_pred CCChHHHHHHHHHHHHhccccchh-hHHHhHHHHHHHHHHHHHhhhhhcC------------------------------
Q 019167 11 PKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLSG------------------------------ 59 (345)
Q Consensus 11 ~k~P~e~Vr~~~e~l~~l~~~~~~-~~~~~~k~~ee~~K~l~~mk~il~g------------------------------ 59 (345)
|..-..+|+.+.+.|..++..... =.++.+++.+++.+.-..++..+-+
T Consensus 122 p~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~ 201 (284)
T 2prs_A 122 PEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTV 201 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCEEEEESCCHHHHHHHTCCCCEEEES
T ss_pred HHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEECccHHHHHHHCCCeEeEeecc
Confidence 667778999999999999865420 1234445555555444444444321
Q ss_pred CCCCCCCHHHHHHHHHHHHhhc
Q 019167 60 DGEVEPNADQVLQLATEVCKED 81 (345)
Q Consensus 60 ~~e~ep~~e~~~qL~~ei~~~d 81 (345)
..+.+|+|..+.+|...+-..+
T Consensus 202 ~~~~eps~~~l~~l~~~ik~~~ 223 (284)
T 2prs_A 202 NPEIQPGAQRLHEIRTQLVEQK 223 (284)
T ss_dssp STTSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHcC
Confidence 2367899999999888776554
No 83
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=21.04 E-value=1.6e+02 Score=26.96 Aligned_cols=71 Identities=20% Similarity=0.069 Sum_probs=45.9
Q ss_pred CCChHHHHHHHHHHHHhccccchh-hHHHhHHHHHHHHHHHHHhhhhhcC------------------------------
Q 019167 11 PKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLSG------------------------------ 59 (345)
Q Consensus 11 ~k~P~e~Vr~~~e~l~~l~~~~~~-~~~~~~k~~ee~~K~l~~mk~il~g------------------------------ 59 (345)
|..-..+|+.+.+.|..++..... =.++.+++.+++...-..++..+-.
T Consensus 127 p~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~ 206 (286)
T 3gi1_A 127 PVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLGISGI 206 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEESCCHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHCCCeEeecccc
Confidence 667778999999999999865421 1234455566665555555555432
Q ss_pred CCCCCCCHHHHHHHHHHHHhhc
Q 019167 60 DGEVEPNADQVLQLATEVCKED 81 (345)
Q Consensus 60 ~~e~ep~~e~~~qL~~ei~~~d 81 (345)
.++.+|++..+.+|...+-..+
T Consensus 207 ~~~~eps~~~l~~l~~~ik~~~ 228 (286)
T 3gi1_A 207 SPEQEPSPRQLKEIQDFVKEYN 228 (286)
T ss_dssp CC---CCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHcC
Confidence 2356799999999988886665
Done!