BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019172
(345 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224071393|ref|XP_002303438.1| shikimate kinase-like protein [Populus trichocarpa]
gi|222840870|gb|EEE78417.1| shikimate kinase-like protein [Populus trichocarpa]
Length = 384
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/280 (68%), Positives = 223/280 (79%), Gaps = 13/280 (4%)
Query: 15 SISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVV-PIKTHDRRRFTCSNSLSS 73
S+S P S S+T S S+SI KS N P+ + RF+C N +S+
Sbjct: 25 SLSNIPFSISKTNFTSVANFSLSI--------PASKSNNASSPLNRY--SRFSC-NCIST 73
Query: 74 IPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETN 133
NT+ YEFSD S+E+ELRL L L+IQSS+DIFVDADGT L V+V SGS ITLIETN
Sbjct: 74 ATPNTN-YEFSDSSSEVELRLSLVGLDIQSSRDIFVDADGTSLVVQVQHSGSHITLIETN 132
Query: 134 QLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVG 193
++F+KIKP ETIW+ID+DQLVIN+KKQDP+LKWPDIVESWESLTAGSMQLLKG SIFLVG
Sbjct: 133 KMFEKIKPAETIWFIDDDQLVINMKKQDPDLKWPDIVESWESLTAGSMQLLKGASIFLVG 192
Query: 194 DSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLS 253
DSTE+N+KVA ELAVGLGYT L T+ELLETFAKQTIDSW+LAEGSDSV EC +LESLS
Sbjct: 193 DSTEINQKVARELAVGLGYTLLDTQELLETFAKQTIDSWVLAEGSDSVAEAECAILESLS 252
Query: 254 SHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
SHVRAVV+TLGG+QGAA +A KWQHLYAGFTVWLSQTEA+
Sbjct: 253 SHVRAVVSTLGGKQGAAGKAYKWQHLYAGFTVWLSQTEAL 292
>gi|255555887|ref|XP_002518979.1| ATP binding protein, putative [Ricinus communis]
gi|223541966|gb|EEF43512.1| ATP binding protein, putative [Ricinus communis]
Length = 382
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 214/262 (81%), Gaps = 11/262 (4%)
Query: 38 IFKPIFISSSLH-------KSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEI 90
I KP+F S S KS NV K ++R +C ++ ++ ++ YEFSDGS+E+
Sbjct: 32 ISKPVFTSISKFCLPISSFKSYNVSASKEYNRLSCSCFSTATT----STNYEFSDGSSEV 87
Query: 91 ELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDE 150
ELRL LGS + +S KDIFVDADGT L VRV RSGSF TLI+TN LFDKIKP ETIWYID+
Sbjct: 88 ELRLPLGSQDYESGKDIFVDADGTSLIVRVKRSGSFTTLIQTNYLFDKIKPAETIWYIDD 147
Query: 151 DQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGL 210
DQLVINLKKQDPELKWPDIVESWESLTAG+MQLLKGTSI++VGDSTE+N+KVA ELA GL
Sbjct: 148 DQLVINLKKQDPELKWPDIVESWESLTAGAMQLLKGTSIYIVGDSTEINQKVARELAGGL 207
Query: 211 GYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAA 270
GYTPL T+ELLET+ KQTIDSW+LAEGSDSV E +LESLSSHVRAV++TLG ++GAA
Sbjct: 208 GYTPLDTQELLETYTKQTIDSWVLAEGSDSVAEAESAILESLSSHVRAVISTLGRKKGAA 267
Query: 271 ARADKWQHLYAGFTVWLSQTEA 292
R+D+W+HLYAGFTVWLSQTEA
Sbjct: 268 GRSDRWRHLYAGFTVWLSQTEA 289
>gi|449465896|ref|XP_004150663.1| PREDICTED: uncharacterized protein LOC101203272 [Cucumis sativus]
gi|449517683|ref|XP_004165874.1| PREDICTED: uncharacterized LOC101203272 [Cucumis sativus]
Length = 384
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/249 (71%), Positives = 207/249 (83%)
Query: 44 ISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQS 103
IS++L ++ P T RFT + S S+ P T YEF+D S+E+ELRLQLG+ +I+S
Sbjct: 40 ISTALTSCFSLSPSNTRFSSRFTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRS 99
Query: 104 SKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPE 163
SKD++VDA+ T LT+RV R GS ITL+ET QLF+KIKP ETIWYIDEDQLVINLKK DP+
Sbjct: 100 SKDVYVDANDTSLTIRVQRPGSIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPD 159
Query: 164 LKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET 223
LKWPDIVESWESLTAG QLLKGTSIFL+GDST++N+KVA ELAVGLGYTPLSTKELLET
Sbjct: 160 LKWPDIVESWESLTAGFAQLLKGTSIFLIGDSTDINQKVAHELAVGLGYTPLSTKELLET 219
Query: 224 FAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGF 283
+KQTIDSWMLAEGSD+V E V+ESLSSHVRAVVATLGG+ GAA R D W+HLYAGF
Sbjct: 220 LSKQTIDSWMLAEGSDAVAQVENTVIESLSSHVRAVVATLGGRLGAAGRTDTWRHLYAGF 279
Query: 284 TVWLSQTEA 292
TVWLSQTEA
Sbjct: 280 TVWLSQTEA 288
>gi|225427143|ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266016 [Vitis vinifera]
gi|297742063|emb|CBI33850.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/287 (63%), Positives = 225/287 (78%), Gaps = 19/287 (6%)
Query: 12 SLSSISQNPISKSETQH----FSSPRHSVSIF-KPIFISSSLHKSTNVVPIKTHDRRRFT 66
SL SQNP + + H SSP+ ++++F P FIS++ RR +
Sbjct: 4 SLFFFSQNPFTSPQISHPKISLSSPKPTLTLFTPPPFISNNA-------------TRRLS 50
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C +LS+I N S YEFSD S+E+ELRLQLG SS+DIFVDA+ + L + V +SGSF
Sbjct: 51 C-KALSTISVNPSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGVKQSGSF 109
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITL+E N+L++KIK +ETIWYIDEDQLV+NLKKQDP+LKWPDIVESWESLTAG+MQLLKG
Sbjct: 110 ITLVEINKLYEKIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLTAGAMQLLKG 169
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI++VGDSTE+N+KVA ELAVGLGYTPL+TKELLETFAKQ+IDSW+ A+GS+SV E
Sbjct: 170 TSIYIVGDSTEINDKVARELAVGLGYTPLNTKELLETFAKQSIDSWVTADGSESVAEAES 229
Query: 247 DVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
VLE+LSSHVRAV+ATLGG GAA RADKW+HLYAGFTVWLSQ+E++
Sbjct: 230 AVLENLSSHVRAVIATLGGLHGAARRADKWRHLYAGFTVWLSQSESI 276
>gi|388490874|gb|AFK33503.1| unknown [Lotus japonicus]
Length = 376
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 164/230 (71%), Positives = 196/230 (85%), Gaps = 3/230 (1%)
Query: 63 RRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNR 122
R CS + P T+ YEFSDGS+E+ELRL +G L+IQS++DI VDAD + L ++V R
Sbjct: 54 RPCKCSYT---APVPTTTYEFSDGSSEMELRLNIGGLDIQSTRDISVDADDSSLAIKVLR 110
Query: 123 SGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQ 182
SGS +TLIETN LFD+IKP+ETIWYIDEDQLV+N KKQDP+LKWPDI+ESWESL AGS Q
Sbjct: 111 SGSPLTLIETNPLFDRIKPSETIWYIDEDQLVVNFKKQDPDLKWPDIMESWESLAAGSTQ 170
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+GTSI+LVGDSTE+N+KVA ELA+GLGYTPL+TKELLE + KQT+DSW+LAEG DSV
Sbjct: 171 LLQGTSIYLVGDSTEINQKVAQELAIGLGYTPLNTKELLEAYTKQTVDSWLLAEGPDSVA 230
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
E VLES+SS+ RAVVATLGG+QGA+ R+DKWQHL+AGFTVWLSQTEA
Sbjct: 231 EAESSVLESMSSYARAVVATLGGKQGASRRSDKWQHLHAGFTVWLSQTEA 280
>gi|357485087|ref|XP_003612831.1| Shikimate kinase-like protein [Medicago truncatula]
gi|355514166|gb|AES95789.1| Shikimate kinase-like protein [Medicago truncatula]
Length = 377
Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 164/226 (72%), Positives = 197/226 (87%), Gaps = 1/226 (0%)
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C S ++ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS
Sbjct: 57 CKCSFTA-PVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSP 115
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITLI+TN LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKG
Sbjct: 116 ITLIDTNPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKG 175
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI+LVGDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAEGSDSV GE
Sbjct: 176 TSIYLVGDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEG 235
Query: 247 DVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
VLES+SSHVRA VATLGG+ GAA R+DKW+HLYAGFTVWLSQTEA
Sbjct: 236 TVLESISSHVRAAVATLGGKHGAAGRSDKWRHLYAGFTVWLSQTEA 281
>gi|356497645|ref|XP_003517670.1| PREDICTED: uncharacterized protein LOC100816906 [Glycine max]
Length = 369
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 168/240 (70%), Positives = 199/240 (82%), Gaps = 4/240 (1%)
Query: 55 VPIKTHDR-RRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADG 113
+P K + R R CS S+ P +T+ YEFSDGS+E+ELRL +G L+++SS+DI VD +
Sbjct: 37 LPQKHYLRLRPCKCS---STAPVSTTTYEFSDGSSEVELRLNIGGLDVRSSRDILVDTND 93
Query: 114 TCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESW 173
T L +RV R GS ITLIETN LFD++K +ETIWYID+DQLV+N KKQDP+LKWPDI+ESW
Sbjct: 94 TSLAIRVLRPGSPITLIETNPLFDRVKSSETIWYIDDDQLVVNFKKQDPDLKWPDIMESW 153
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
ESLTAGS QLL+GTSI+LVGDSTE+N+KVA ELA GLGYTPLSTKELLE + KQT+DSW+
Sbjct: 154 ESLTAGSPQLLQGTSIYLVGDSTEINQKVAQELATGLGYTPLSTKELLELYTKQTVDSWL 213
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
LAEGSDSV E VLES+SSH RAVVATLGGQ AA RA KWQHLYAGFTVWLS+TEA+
Sbjct: 214 LAEGSDSVAEAESAVLESISSHARAVVATLGGQHSAAGRAGKWQHLYAGFTVWLSKTEAL 273
>gi|388504258|gb|AFK40195.1| unknown [Medicago truncatula]
Length = 377
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/226 (72%), Positives = 196/226 (86%), Gaps = 1/226 (0%)
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C S ++ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS
Sbjct: 57 CKCSFTA-PVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSP 115
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITLI+TN LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKG
Sbjct: 116 ITLIDTNPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKG 175
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI+L GDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAEGSDSV GE
Sbjct: 176 TSIYLAGDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEG 235
Query: 247 DVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
VLES+SSHVRA VATLGG+ GAA R+DKW+HLYAGFTVWLSQTEA
Sbjct: 236 TVLESISSHVRAAVATLGGKHGAAGRSDKWRHLYAGFTVWLSQTEA 281
>gi|18403860|ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana]
gi|75100603|sp|O82290.2|SKL2_ARATH RecName: Full=Probable inactive shikimate kinase like 2,
chloroplastic; Short=AtSKL2; Flags: Precursor
gi|15724242|gb|AAL06514.1|AF412061_1 At2g35500/T32F12.12 [Arabidopsis thaliana]
gi|18377827|gb|AAL67100.1| At2g35500/T32F12.12 [Arabidopsis thaliana]
gi|20197350|gb|AAC36171.2| expressed protein [Arabidopsis thaliana]
gi|330254020|gb|AEC09114.1| shikimate kinase like 2 [Arabidopsis thaliana]
Length = 387
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/296 (61%), Positives = 220/296 (74%), Gaps = 12/296 (4%)
Query: 3 AAAATYHHLSLSSISQNPISKSET-----QHFSSPRHSVSIFKPIFISSSLHKSTNVVPI 57
AA A+ + +S S NP++ T + SSPR S F + S NV+P
Sbjct: 2 AAFASGLAIIFNSPSLNPVTTQATFLSSNRIRSSPR-VFSGFHSLRRRGFRRFSQNVIP- 59
Query: 58 KTHDR-RRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCL 116
DR F+C N LS++ +T YEF+DG E+ELRL+L + EI S KDI VDADGT L
Sbjct: 60 ---DRFNSFSC-NCLSAVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSL 115
Query: 117 TVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESL 176
V+ R+G ITL+ETN LF+KI P+ETIWYIDEDQLV+N+KK D ELKWPDIVESWESL
Sbjct: 116 AVKEKRNGLLITLLETNHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESL 175
Query: 177 TAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE 236
TAG MQLLKG SI++VGDSTE+N+KV+ ELAVGLGY+PL +KELLE+F+KQTIDSW+LAE
Sbjct: 176 TAGMMQLLKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWILAE 235
Query: 237 GSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
G DSV E VLESLSSHVR VV+TLGG+ GAA RAD+W+HLY+GFTVW+SQTEA
Sbjct: 236 GPDSVAEAESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEA 291
>gi|297823343|ref|XP_002879554.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp.
lyrata]
gi|297325393|gb|EFH55813.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 183/308 (59%), Positives = 220/308 (71%), Gaps = 32/308 (10%)
Query: 1 MAAAAATYHHLSLSSISQNPISKSETQHFSSPRHSVSIFKPIFISSS------LHK---- 50
MAA A+ S S NP++ T +F PI I SS LH
Sbjct: 1 MAAFASGLASTIFYSPSLNPLTCQAT-----------LFSPIRIRSSPRVFRGLHSLRRR 49
Query: 51 -----STNVVPIKTHDR-RRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSS 104
S NV T DR + F+C N LS++ +T YEF+DG E+ELRL+L + E S
Sbjct: 50 GFRRFSQNV----TTDRFKSFSC-NCLSAVSTSTIDYEFTDGGKEVELRLRLKTGETLSP 104
Query: 105 KDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPEL 164
KDI VDADGT L V+ R+G ITL+ETNQLF+KI P+ETIWYIDEDQLV+N+KK D EL
Sbjct: 105 KDISVDADGTSLAVKEKRNGLLITLLETNQLFEKIMPSETIWYIDEDQLVVNMKKVDGEL 164
Query: 165 KWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF 224
KWPDIVESWESLTAG MQLLKG SI++VGDSTE+N+KV+ ELAVGLGY+PL +KELLE+F
Sbjct: 165 KWPDIVESWESLTAGMMQLLKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELLESF 224
Query: 225 AKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFT 284
+KQTIDSW++AEG DSV E VLESLSSHVR VV+TLGG+ GAA RAD+W+HLY+GFT
Sbjct: 225 SKQTIDSWIVAEGPDSVAEAESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFT 284
Query: 285 VWLSQTEA 292
VW+SQTEA
Sbjct: 285 VWVSQTEA 292
>gi|115483646|ref|NP_001065493.1| Os10g0577700 [Oryza sativa Japonica Group]
gi|78709051|gb|ABB48026.1| expressed protein [Oryza sativa Japonica Group]
gi|113640025|dbj|BAF27330.1| Os10g0577700 [Oryza sativa Japonica Group]
gi|215692645|dbj|BAG88065.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712379|dbj|BAG94506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185074|gb|EEC67501.1| hypothetical protein OsI_34782 [Oryza sativa Indica Group]
Length = 375
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 172/223 (77%)
Query: 70 SLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITL 129
S+SS A YEF+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TL
Sbjct: 59 SVSSSTAPAKDYEFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTL 118
Query: 130 IETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSI 189
I QLFD+IK +ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+
Sbjct: 119 INVKQLFDRIKSSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISV 178
Query: 190 FLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVL 249
+VGDST++NE VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VL
Sbjct: 179 HIVGDSTDINEAVAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVL 238
Query: 250 ESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
ESLSSHVR VVATLGG+QGAA+R DKWQ+L+AGFTVWLS ++A
Sbjct: 239 ESLSSHVRTVVATLGGKQGAASRFDKWQYLHAGFTVWLSVSDA 281
>gi|357141190|ref|XP_003572125.1| PREDICTED: uncharacterized protein LOC100823385 [Brachypodium
distachyon]
Length = 372
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/276 (52%), Positives = 188/276 (68%), Gaps = 14/276 (5%)
Query: 26 TQHFSSP----RHSVS----IFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPAN 77
T FS P RHS + +P + S L S R R S+S+ PA
Sbjct: 8 TCSFSLPANPGRHSTRAPRLLLRPAYRRSLLAASP-----PPASRLRLRPRTSVSASPAA 62
Query: 78 TSQ-YEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLF 136
+ YEF+DG+ E+ELRL +G L I+SS+D+FVD D L +R G+ TL+ LF
Sbjct: 63 AERDYEFTDGNGEVELRLDIGKLGIESSRDVFVDVDDMSLLIRAKSDGTLRTLMNVTTLF 122
Query: 137 DKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDST 196
D++K +ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST
Sbjct: 123 DRVKSSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDST 182
Query: 197 EVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHV 256
++NE VA E+A G+GY P+ T ELLE+ +++ID+W EG DSV EC VLESLSSHV
Sbjct: 183 DINEAVAKEIAEGIGYLPVCTSELLESATQKSIDAWADTEGVDSVAEAECVVLESLSSHV 242
Query: 257 RAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
R VVATLGG+QGAA+R DKWQ+L++GFTVWLS ++A
Sbjct: 243 RTVVATLGGKQGAASRFDKWQYLHSGFTVWLSVSDA 278
>gi|194688246|gb|ACF78207.1| unknown [Zea mays]
gi|414867928|tpg|DAA46485.1| TPA: ATP binding protein [Zea mays]
Length = 384
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/265 (52%), Positives = 184/265 (69%)
Query: 28 HFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGS 87
H SP +S P ++ + ++ + R S+S+ PA + YEF+DG+
Sbjct: 26 HRRSPSGILSSHLPRLPATQFRRLRSLSAAASPPASRLRPRASVSTSPAPSKDYEFTDGN 85
Query: 88 AEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWY 147
E+ELRL + L I SSKD+FVD D T L +R G+ TL+ LFD+IK +ETIW+
Sbjct: 86 GEVELRLDIQKLGIASSKDVFVDVDDTSLLIRAKSDGTLRTLMNVQTLFDRIKSSETIWF 145
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
IDEDQLV+NLKK + ELKWPD+ ESWESLT+G QLL G S+ +VGDST +NE VA E+A
Sbjct: 146 IDEDQLVVNLKKVEQELKWPDVDESWESLTSGITQLLTGISVHIVGDSTHINEAVAKEIA 205
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQ 267
G+GY P+ T ELLE+ +++ID+W+ +EG DSV E VLESLSSHVR VVATLGG+Q
Sbjct: 206 EGIGYLPVCTSELLESATEKSIDTWVASEGVDSVAEAESVVLESLSSHVRTVVATLGGKQ 265
Query: 268 GAAARADKWQHLYAGFTVWLSQTEA 292
GAA+R DKWQ+L++GFTVWLS ++A
Sbjct: 266 GAASRFDKWQYLHSGFTVWLSVSDA 290
>gi|212276119|ref|NP_001130083.1| uncharacterized protein LOC100191176 [Zea mays]
gi|195628578|gb|ACG36119.1| ATP binding protein [Zea mays]
Length = 384
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/265 (52%), Positives = 184/265 (69%)
Query: 28 HFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGS 87
H SP +S P ++ + ++ + R S+S+ PA + YEF+DG+
Sbjct: 26 HRRSPSGILSSHLPRLPATQFRRLRSLSAAASPPASRLRPRASVSTSPAPSKDYEFTDGN 85
Query: 88 AEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWY 147
E+ELRL + L I SSKD+FVD D T L +R G+ TL+ LFD+IK +ETIW+
Sbjct: 86 GEVELRLDIQKLGIASSKDVFVDVDDTFLLIRAKSDGTLRTLMNVQTLFDRIKSSETIWF 145
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
IDEDQLV+NLKK + ELKWPD+ ESWESLT+G QLL G S+ +VGDST +NE VA E+A
Sbjct: 146 IDEDQLVVNLKKVEQELKWPDVDESWESLTSGITQLLTGISVHIVGDSTHINEAVAKEIA 205
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQ 267
G+GY P+ T ELLE+ +++ID+W+ +EG DSV E VLESLSSHVR VVATLGG+Q
Sbjct: 206 EGIGYLPVCTSELLESATEKSIDTWVASEGVDSVAEAESVVLESLSSHVRTVVATLGGKQ 265
Query: 268 GAAARADKWQHLYAGFTVWLSQTEA 292
GAA+R DKWQ+L++GFTVWLS ++A
Sbjct: 266 GAASRFDKWQYLHSGFTVWLSVSDA 290
>gi|222613330|gb|EEE51462.1| hypothetical protein OsJ_32585 [Oryza sativa Japonica Group]
Length = 275
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 163/210 (77%)
Query: 82 EFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKP 141
+F+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TLI QLFD+IK
Sbjct: 4 KFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTLINVKQLFDRIKS 63
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST++NE
Sbjct: 64 SETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTDINEA 123
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVA 261
VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VLESLSSHVR VVA
Sbjct: 124 VAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVLESLSSHVRTVVA 183
Query: 262 TLGGQQGAAARADKWQHLYAGFTVWLSQTE 291
TLGG+QGAA+R DKWQ+L+AGFT+ LS E
Sbjct: 184 TLGGKQGAASRFDKWQYLHAGFTMKLSAKE 213
>gi|242040065|ref|XP_002467427.1| hypothetical protein SORBIDRAFT_01g027930 [Sorghum bicolor]
gi|241921281|gb|EER94425.1| hypothetical protein SORBIDRAFT_01g027930 [Sorghum bicolor]
Length = 387
Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 166/212 (78%)
Query: 81 YEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
YEF+DG+ E+ELRL + L I+S++D+FVD D T L +R G+ TL+ LFD+IK
Sbjct: 82 YEFTDGNGEVELRLDIQKLGIESARDVFVDVDDTSLLIRAKSDGTLRTLMNVQTLFDRIK 141
Query: 141 PTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNE 200
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST +NE
Sbjct: 142 SSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTHINE 201
Query: 201 KVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVV 260
VA E+A G+GY P+ T ELLE+ +++ID+W+ +EG+DSV E VLESLSSHVR VV
Sbjct: 202 AVAKEIAEGIGYLPVCTSELLESATQKSIDTWVASEGADSVAEAESVVLESLSSHVRTVV 261
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
ATLGG+QGAA+R D+WQ+L++GFTVWLS ++A
Sbjct: 262 ATLGGKQGAASRFDRWQYLHSGFTVWLSVSDA 293
>gi|217072810|gb|ACJ84765.1| unknown [Medicago truncatula]
Length = 240
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C S ++ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS
Sbjct: 57 CKCSFTA-PVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSP 115
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITLI+TN LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKG
Sbjct: 116 ITLIDTNPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKG 175
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI+L GDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAE SDSV GE
Sbjct: 176 TSIYLAGDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAESSDSVAEGEG 235
Query: 247 DVLES 251
VLE+
Sbjct: 236 TVLEA 240
>gi|147767344|emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
Length = 1576
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/225 (61%), Positives = 170/225 (75%), Gaps = 19/225 (8%)
Query: 12 SLSSISQNPISKSETQH----FSSPRHSVSIF-KPIFISSSLHKSTNVVPIKTHDRRRFT 66
SL SQNP + + H S P+ ++++F P FIS++ RR +
Sbjct: 4 SLFFFSQNPFTSPQISHPKISLSXPKPTLTLFTPPPFISNNA-------------TRRLS 50
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C +LS+I N S YEFSD S+E+ELRLQLG SS+DIFVDA+ + L + V +SGSF
Sbjct: 51 C-KALSTISLNPSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGVKQSGSF 109
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITL+E N L++KIK +ETIWYIDEDQLV+NLKKQDP+LKWPDIVESWESLTAG+MQLLKG
Sbjct: 110 ITLVEINXLYEKIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLTAGAMQLLKG 169
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDS 231
TSI++VGDSTE+N+KVA ELAVGLGYTPL+TKELLETFAKQ+IDS
Sbjct: 170 TSIYIVGDSTEINDKVARELAVGLGYTPLNTKELLETFAKQSIDS 214
>gi|18057165|gb|AAL58188.1|AC027037_10 unknown protein [Oryza sativa Japonica Group]
Length = 336
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/239 (55%), Positives = 166/239 (69%), Gaps = 28/239 (11%)
Query: 82 EFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKP 141
+F+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TLI QLFD+IK
Sbjct: 4 KFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTLINVKQLFDRIKS 63
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST++NE
Sbjct: 64 SETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTDINEA 123
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLS-------- 253
VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VLESLS
Sbjct: 124 VAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVLESLSRLLLWATP 183
Query: 254 --------------------SHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
SHVR VVATLGG+QGAA+R DKWQ+L+AGFTVWLS ++A
Sbjct: 184 SLLPLVDVLLSMLKRLFLPRSHVRTVVATLGGKQGAASRFDKWQYLHAGFTVWLSVSDA 242
>gi|302814728|ref|XP_002989047.1| hypothetical protein SELMODRAFT_129117 [Selaginella moellendorffii]
gi|300143148|gb|EFJ09841.1| hypothetical protein SELMODRAFT_129117 [Selaginella moellendorffii]
Length = 304
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 82 EFSDGSAEIELRLQLG-SLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
+F D E+ELRLQ+ E SSK++ ++A L V + TL+ +L+ +IK
Sbjct: 2 QFRDDGGELELRLQVPPDHEEISSKNVAINAHDLSLDVALMSQKGIRTLLSIPRLYSRIK 61
Query: 141 PTETIWY-----IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDS 195
P ET+WY IDED++V++LKKQD WP ++E+WE L G +LK TSI++VGDS
Sbjct: 62 PIETMWYALCRFIDEDEIVLSLKKQDVTQPWPGLLEAWEYLGKGVAGMLKATSIYIVGDS 121
Query: 196 TEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSH 255
T +N VA ELA+ LGY PL +K+L+E K ++D + EG D+V EC V E+LS
Sbjct: 122 TLINSAVAKELALALGYVPLESKKLMEQLLKTSLDDYAKLEGPDAVAELECKVFETLSKQ 181
Query: 256 VRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
+R VVATLGG QGAA++ W+ +YAGFTVWLS++++
Sbjct: 182 LRVVVATLGGDQGAASKPHSWRFMYAGFTVWLSRSQS 218
>gi|302803929|ref|XP_002983717.1| hypothetical protein SELMODRAFT_118907 [Selaginella moellendorffii]
gi|300148554|gb|EFJ15213.1| hypothetical protein SELMODRAFT_118907 [Selaginella moellendorffii]
Length = 305
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 82 EFSDGSAEIELRLQLG-SLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
+F D E+ELRLQ+ E SSK++ ++A L V + TL+ +L+ +IK
Sbjct: 2 QFRDDGGELELRLQVPPDHEEISSKNVAINAHDFSLDVALMSQKGIRTLLSIPRLYSRIK 61
Query: 141 PTETIWY-----IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDS 195
P ET+WY IDED++V++LKKQD WP ++E+WE L G +LK TSI++VGDS
Sbjct: 62 PIETMWYALCRFIDEDEIVLSLKKQDVTQPWPGLLEAWEYLGKGVAGMLKATSIYIVGDS 121
Query: 196 TEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSH 255
T +N VA ELA+ LGY PL +K+L+E K ++D + E D+V EC V E+LS
Sbjct: 122 TLINSAVAQELALALGYVPLESKKLMEQLLKTSLDDYAKLEDRDAVAELECKVFETLSKQ 181
Query: 256 VRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
+R VVATLGG QGAA++ W+ +YAGFTVWLS++++
Sbjct: 182 LRVVVATLGGVQGAASKPHSWRFMYAGFTVWLSRSQS 218
>gi|357436723|ref|XP_003588637.1| Shikimate kinase-like protein [Medicago truncatula]
gi|355477685|gb|AES58888.1| Shikimate kinase-like protein [Medicago truncatula]
Length = 124
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 51/63 (80%)
Query: 230 DSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQ 289
+ W+LAEGSDSV GE VL S+SSHVRA VATLGG+ GAA R+DK +HLYAGFTVWLS
Sbjct: 13 NDWLLAEGSDSVAEGEGTVLASISSHVRAAVATLGGKHGAAGRSDKRRHLYAGFTVWLSH 72
Query: 290 TEA 292
EA
Sbjct: 73 IEA 75
>gi|223943249|gb|ACN25708.1| unknown [Zea mays]
gi|414867929|tpg|DAA46486.1| TPA: hypothetical protein ZEAMMB73_757972 [Zea mays]
Length = 149
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 54/85 (63%)
Query: 64 RFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRS 123
R S+S+ PA + YEF+DG+ E+ELRL + L I SSKD+FVD D T L +R
Sbjct: 62 RLRPRASVSTSPAPSKDYEFTDGNGEVELRLDIQKLGIASSKDVFVDVDDTSLLIRAKSD 121
Query: 124 GSFITLIETNQLFDKIKPTETIWYI 148
G+ TL+ LFD+IK +ETIW +
Sbjct: 122 GTLRTLMNVQTLFDRIKSSETIWCV 146
>gi|303277965|ref|XP_003058276.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460933|gb|EEH58227.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 301
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 61/104 (58%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG ++ VGDS N+ V LA LGY PLST +L+E QT + ++G +V
Sbjct: 90 LKGVTVTFVGDSEGANDAVGRALASALGYVPLSTPDLVEKITGQTRAEIVESDGEGGLVI 149
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E V E LS+ +R V++T GG +GA+AR W +L+ F +WL
Sbjct: 150 AENAVFEQLSTQLRCVISTSGGGKGASARGACWDYLFGHFVIWL 193
>gi|255071735|ref|XP_002499542.1| predicted protein [Micromonas sp. RCC299]
gi|226514804|gb|ACO60800.1| predicted protein [Micromonas sp. RCC299]
Length = 280
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 62/104 (59%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG ++ VGD+ N VA E+A LGYTPLST +L+E T + + +G +V
Sbjct: 60 LKGVTVTFVGDNESANIAVAQEVAKALGYTPLSTPDLIEKITDSTREQILEEDGEARLVI 119
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VLE LS+ +R V T GG +GA AR D W +L+ FTVW+
Sbjct: 120 AENAVLEQLSTLIRCAVGTSGGGRGATARGDCWDYLFGQFTVWI 163
>gi|116791194|gb|ABK25891.1| unknown [Picea sitchensis]
Length = 140
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 248 VLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
+LES++++VR VVATLGG GAA R + W++L+AG TVWLSQ+EA
Sbjct: 1 MLESINTNVRVVVATLGGTLGAATRPENWKNLHAGLTVWLSQSEA 45
>gi|428201800|ref|YP_007080389.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
gi|427979232|gb|AFY76832.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
Length = 185
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G S+FLVG V LA LGY T L+E A QTI+ +G +
Sbjct: 4 LLQGVSVFLVGIMGTGKTTVGQILAQQLGYRFFDTDVLIERVAGQTINEIFARQGEERFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMGKLLR 298
E VL LS++ ++V+AT G G R W +L+ G VWL +A +LLR
Sbjct: 64 ELETQVLAELSAYTKSVIATGG---GIVMRPINWSYLHHGLIVWL---DAPVELLR 113
>gi|428311952|ref|YP_007122929.1| shikimate kinase [Microcoleus sp. PCC 7113]
gi|428253564|gb|AFZ19523.1| shikimate kinase [Microcoleus sp. PCC 7113]
Length = 178
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M+ LKG ++FLVG V LA LGY+ + T ++E A ++I+ EG ++
Sbjct: 1 MKELKGINVFLVGMMGTGKTTVGDLLARQLGYSFVDTDNVIEKAAGKSINQIFADEGEEA 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E +VL LS+H R VAT G G + W +L+ G +WL
Sbjct: 61 FRQLESEVLSHLSAHTRLTVATGG---GIVLKRFNWSYLHHGLVIWLD 105
>gi|303289006|ref|XP_003063791.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454859|gb|EEH52164.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G+S+FLVG V +LA LGY T E++E+ K TI EG D
Sbjct: 5 LDGSSVFLVGMMGTGKSSVGKKLAAELGYNFFDTDEIIESVTKMTIPEIFAEEGEDGFRE 64
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E +L ++S+ + VVAT G G R W HL G + LS
Sbjct: 65 IETQILAEIASYKKCVVATGG---GIVKRKANWMHLRNGIVLCLS 106
>gi|332711887|ref|ZP_08431817.1| shikimate kinase [Moorea producens 3L]
gi|332349215|gb|EGJ28825.1| shikimate kinase [Moorea producens 3L]
Length = 182
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG ++FL+G V LA LGY T L+E A +TI+ +G ++
Sbjct: 4 LLKGINVFLIGMMGAGKTTVGGLLASELGYGFCDTDALIEQIAGKTINEIFAEDGEETFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
E VL LS++ + +VAT G G + W +L+ G VWL AM
Sbjct: 64 QLETQVLSQLSAYQQLIVATGG---GIVLKPQNWSYLHYGLVVWLDVPVAM 111
>gi|443478875|ref|ZP_21068568.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
gi|443015775|gb|ELS30595.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
Length = 185
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+L GT+IFLVG + LA L Y + T L+E A ++I +G D
Sbjct: 1 MLNGTNIFLVGMMGAGKSTIGKLLAQKLSYNFVDTDPLIEQCAGKSITDIFTHDGEDLFR 60
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
+ E VL +SS+ R VVAT G G R+ W HL+ G VW+
Sbjct: 61 DLEQQVLSQVSSYTRLVVATGG---GIVLRSLNWSHLHDGIVVWID 103
>gi|428769981|ref|YP_007161771.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
gi|428684260|gb|AFZ53727.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
Length = 183
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+LLKG +I+L+G V LA L Y L T ++ ++++I+ +G D
Sbjct: 3 ELLKGLNIYLIGMMGSGKTTVGELLAKELEYRFLDTDAIISAVSEKSINQIFAEDGEDEF 62
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E DVL+ +S+++ V+AT G G R W HL G VWL+
Sbjct: 63 RQLESDVLQEVSAYLYTVIATGG---GIILRQQNWSHLRDGMVVWLN 106
>gi|67922250|ref|ZP_00515764.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|416389334|ref|ZP_11685333.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
gi|67855953|gb|EAM51198.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|357264243|gb|EHJ13156.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
Length = 188
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 23/178 (12%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
QLL+G ++FLVG V LA L Y + L+E QTI+ +G ++
Sbjct: 5 QLLQGVNVFLVGMMGTGKTTVGQNLAQRLNYRFFDSDVLVEKVTGQTINDIFATQGEETF 64
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-----QTEAMGK- 295
E VL L+S ++V+AT G G+ + W +L+ G VWL T+ + K
Sbjct: 65 RQLETQVLSELASCTKSVIATGG---GSVLKPKNWSYLHHGLIVWLDVSLPILTQRLAKD 121
Query: 296 ----LLRVFVLSLHLRSV----------TSYFVRLEFVSSFSRTNEHIMARKPAVMKT 339
LL+ LSL L+S+ + + ++ + T E I+ P V+KT
Sbjct: 122 TTRPLLQTTDLSLKLQSLSEQRNPLYAQSDLRIIIDREQTADDTVEQILELIPTVIKT 179
>gi|126657832|ref|ZP_01728985.1| shikimate kinase [Cyanothece sp. CCY0110]
gi|126620772|gb|EAZ91488.1| shikimate kinase [Cyanothece sp. CCY0110]
Length = 188
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G ++FL+G V +LA L Y T L+E KQ+I + +G ++
Sbjct: 6 LLQGVNVFLIGMMGTGKTTVGKKLAQRLNYRFFDTDVLIEKVTKQSITNIFATQGEETFR 65
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS ++V+AT GG G ++ W +L+ G +WL
Sbjct: 66 DLESQVLSELSSCTKSVIAT-GG--GIVLKSINWSYLHHGLIIWL 107
>gi|449019708|dbj|BAM83110.1| shikimate kinase [Cyanidioschyzon merolae strain 10D]
Length = 287
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG + LA L Y + T ++E +++I +G ++ +
Sbjct: 83 LHGASVYLVGMMGSGKSTLGAYLAKALEYAFIDTDVIIERTLQKSIPEIFAQDGEETFRD 142
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
E VLESL SHVR VVAT G G R W L+ G V+L+ T M
Sbjct: 143 VESLVLESLQSHVRTVVATGG---GVVLRQRNWGTLHTGLVVYLNGTPDM 189
>gi|307109411|gb|EFN57649.1| hypothetical protein CHLNCDRAFT_34609 [Chlorella variabilis]
Length = 263
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
E A ++ L+GTS+FLVG V ++ LGY T L+E +++ +
Sbjct: 95 EDTAAEVVEGLQGTSLFLVGMMGSGKSTVGKLISQALGYCFFDTDTLIEQLSQKKVSEIF 154
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
+G +S E VL LS VVAT G G +A+ W H+ G +VWL+
Sbjct: 155 AEDGEESFRELETQVLAELSPFKNCVVATGG---GVPTKAENWGHMQGGVSVWLN 206
>gi|254417028|ref|ZP_05030775.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176195|gb|EDX71212.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
Length = 177
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G V LA LGY + T L+E A QTI+ G D
Sbjct: 5 LLKGINVYLIGMMGVGKTTVGQRLAKELGYRFVDTDVLIEQVAGQTINQIFADRGEDEFR 64
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL +S++ VAT G G + W +L+ G VWL
Sbjct: 65 QLEAQVLSEVSAYTNLTVATGG---GIVLKQMNWSYLHQGLIVWLD 107
>gi|412986476|emb|CCO14902.1| predicted protein [Bathycoccus prasinos]
Length = 420
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAK-QTIDSWMLAEGSDS 240
+LL+G ++ VG++ + N +++ LA L Y+P+S EL+ + ++ + EG
Sbjct: 207 KLLRGVNVVAVGENEKANHQLSELLAPLLAYSPMSVPELIRGISDGKSREDIARLEGDAE 266
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQ-GAAARADKWQHLYAGFTVWLSQTEA 292
+ E V E LS +R +AT G GA AR D W ++ T+W+ E+
Sbjct: 267 ALMVENSVHEQLSQFLRVSLATCGANGVGALARGDCWAWIFGMITIWVDDEES 319
>gi|284929680|ref|YP_003422202.1| shikimate kinase [cyanobacterium UCYN-A]
gi|284810124|gb|ADB95821.1| shikimate kinase [cyanobacterium UCYN-A]
Length = 183
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +IFL+G LA L Y T L++ ++TI + EG +S
Sbjct: 5 LLQGINIFLIGMMGSGKTTTGKRLAEHLNYRFFDTDTLIKQVKQKTISDIFVEEGEESFR 64
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL L+S R+V+AT G G + + W +L+ G +WL
Sbjct: 65 ILESNVLSELASCTRSVIATGG---GIVLKQENWSYLHHGLIIWL 106
>gi|334121375|ref|ZP_08495445.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
gi|333455089|gb|EGK83750.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
Length = 183
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M L+G +I+LVG V LA L Y T EL+ A Q+I EG ++
Sbjct: 1 MDGLRGVNIYLVGMMGSGKTTVGRILAKKLKYRFFDTDELIVRVANQSIAEIFAQEGEEA 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LS++ +VVAT G G AR+ W +L+ G VWL
Sbjct: 61 FRELETKVLGELSAYQNSVVATGG---GIVARSMNWGYLHYGVVVWL 104
>gi|56750655|ref|YP_171356.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81299703|ref|YP_399911.1| shikimate kinase [Synechococcus elongatus PCC 7942]
gi|81596488|sp|Q5N4D3.1|AROK_SYNP6 RecName: Full=Shikimate kinase; Short=SK
gi|116257513|sp|Q31PU5.1|AROK_SYNE7 RecName: Full=Shikimate kinase; Short=SK
gi|56685614|dbj|BAD78836.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81168584|gb|ABB56924.1| shikimate kinase [Synechococcus elongatus PCC 7942]
Length = 190
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +FLVG + LA LGYT + T L+E ++I ++G
Sbjct: 7 LNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTGRSIPEIFASDGEAGFRQ 66
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VLE ++S+ R VVAT G G R + W +L G +WL
Sbjct: 67 IETQVLEEVASYRRLVVATGG---GIVIRPENWSYLQQGLVIWL 107
>gi|354568276|ref|ZP_08987441.1| Shikimate kinase [Fischerella sp. JSC-11]
gi|353540639|gb|EHC10112.1| Shikimate kinase [Fischerella sp. JSC-11]
Length = 181
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +++L+G + LA LGY + T LLE A +TI+ EG +
Sbjct: 9 LQGINLYLIGMMGAGKSTLGRMLAYELGYGFVDTDNLLEKAAGKTINQLFTEEGEAAFRQ 68
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E +VL + + + V+AT G G R D W +L+ G +WL
Sbjct: 69 LESEVLAQVCAFTKLVIATGG---GIVLRRDNWSYLHHGIIIWLD 110
>gi|427734518|ref|YP_007054062.1| shikimate kinase [Rivularia sp. PCC 7116]
gi|427369559|gb|AFY53515.1| shikimate kinase [Rivularia sp. PCC 7116]
Length = 181
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
LL+G +++L+G V LA L Y + T E++ AK++I+ AEG
Sbjct: 3 NLLQGINLYLIGMMGAGKTTVGRLLASELEYGFVDTDEVITASAKKSINQIFAAEGEAEF 62
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQT 290
E DVL +S++ R VAT G G + W +L+ G VWL T
Sbjct: 63 RKLESDVLSQVSAYTRLTVATGG---GIVLKRQNWSYLHHGLIVWLDAT 108
>gi|255087652|ref|XP_002505749.1| predicted protein [Micromonas sp. RCC299]
gi|226521019|gb|ACO67007.1| predicted protein [Micromonas sp. RCC299]
Length = 269
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+ L G+S+FLVG V +LA LGY+ T E++E K TI G D
Sbjct: 59 EALDGSSLFLVGMMGTGKSSVGKKLAASLGYSFFDTDEVIEQVTKTTIPEIFAESGEDGF 118
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQT 290
E VL ++++ + VVAT G G + W HL G + L+ T
Sbjct: 119 REIETQVLAEIAAYKKCVVATGG---GVVKKKANWMHLRNGVVLCLTGT 164
>gi|428773167|ref|YP_007164955.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
gi|428687446|gb|AFZ47306.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
Length = 184
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+LL+G +++L+G V LA L Y L T +ET +++I+ +G +
Sbjct: 3 RLLRGLNVYLIGMMGSGKSTVGKFLAHKLAYRFLDTDNTIETLTQKSINKIFEEDGEEVF 62
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL +SS++ V++T G G + D W HL G +WL
Sbjct: 63 RTLENQVLAQVSSYLHTVISTGG---GIVLKKDNWAHLRDGMVIWLD 106
>gi|170079112|ref|YP_001735750.1| shikimate kinase [Synechococcus sp. PCC 7002]
gi|169886781|gb|ACB00495.1| shikimate kinase [Synechococcus sp. PCC 7002]
Length = 186
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +I+L+G +A +A + Y L + ++ET AKQ+I G
Sbjct: 4 LLKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIETLAKQSISEIFAEMGEAEFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMGKLLRVFVL 302
E VL+ ++ R VVAT GG + A W +L G T+WL + V +L
Sbjct: 64 KLETQVLKQIAVQTRTVVATGGGIVVSQA---NWYYLRQGLTIWLD--------VPVPIL 112
Query: 303 SLHLRSVTS 311
LRS TS
Sbjct: 113 VERLRSDTS 121
>gi|428306365|ref|YP_007143190.1| shikimate kinase [Crinalium epipsammum PCC 9333]
gi|428247900|gb|AFZ13680.1| shikimate kinase [Crinalium epipsammum PCC 9333]
Length = 184
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+L G +++L+G V EL+ LGY T L+E A QTI G +
Sbjct: 1 MLNGVNVYLIGMMGAGKTTVGRELSNQLGYRFFDTDTLIEQVASQTITQIFTDTGEEGFR 60
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +S++ + +AT G G + + W +L+ G VWL
Sbjct: 61 KLESQVLSEISAYTKLAIATGG---GIVLKRENWSYLHHGLIVWL 102
>gi|16329403|ref|NP_440131.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|383321144|ref|YP_005381997.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324314|ref|YP_005385167.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490198|ref|YP_005407874.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435464|ref|YP_005650188.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|451813562|ref|YP_007450014.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|2492976|sp|P72796.1|AROK_SYNY3 RecName: Full=Shikimate kinase; Short=SK
gi|1651884|dbj|BAA16811.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|339272496|dbj|BAK48983.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|359270463|dbj|BAL27982.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273634|dbj|BAL31152.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276804|dbj|BAL34321.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957278|dbj|BAM50518.1| shikimate kinase [Bacillus subtilis BEST7613]
gi|451779531|gb|AGF50500.1| shikimate kinase [Synechocystis sp. PCC 6803]
Length = 189
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G ++FL+G V LA LGY L+E A + I +G D+ +
Sbjct: 10 LQGVNLFLIGMMGSGKSTVGPLLAEQLGYRFFDADVLIERVAGKAIADIFAEDGEDTFRD 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E +VL L++ R+V+AT G G R W +L+ G +WL
Sbjct: 70 LETEVLGHLAAQTRSVIATGG---GVVLRRQNWSYLHHGLVIWLD 111
>gi|427707062|ref|YP_007049439.1| shikimate kinase [Nostoc sp. PCC 7107]
gi|427359567|gb|AFY42289.1| shikimate kinase [Nostoc sp. PCC 7107]
Length = 186
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G S++L+G V LA LGY + T +++ ++I EG +
Sbjct: 4 LLQGVSLYLIGMMGAGKTTVGRLLAPQLGYRFVDTDDVIAKATGRSITQLFAEEGEAAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL +S+H+ VAT G G R + W +L G VWL
Sbjct: 64 QLESDVLAQVSAHINLTVATGG---GIVVRRENWGYLRHGLIVWL 105
>gi|172036297|ref|YP_001802798.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|354553090|ref|ZP_08972397.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
gi|171697751|gb|ACB50732.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|353554920|gb|EHC24309.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
Length = 189
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
QLL+G ++FL+G V +LA L Y + L+E +Q I +G ++
Sbjct: 6 QLLQGVNVFLIGMMGTGKTTVGQKLAQRLNYRFFDSDVLIERVTQQRISDIFATQGEETF 65
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL L+S ++V+AT GG G + W +L+ G VWL
Sbjct: 66 RELESQVLSELASCTKSVIAT-GG--GIILKPINWSYLHHGLIVWLD 109
>gi|307155208|ref|YP_003890592.1| shikimate kinase [Cyanothece sp. PCC 7822]
gi|306985436|gb|ADN17317.1| Shikimate kinase [Cyanothece sp. PCC 7822]
Length = 183
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD 239
++ LLKG SIFL+G V LA LGY + L+E + T++ G +
Sbjct: 2 TLNLLKGVSIFLIGMPGTGKTTVGELLAEKLGYRFFDSDVLIERVSGNTVNEIFNTLGEE 61
Query: 240 SVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL L S+ ++++AT G G + W +L G +WL
Sbjct: 62 AFRKIESQVLSELCSYTKSIIATGG---GIVIKQMNWSYLRHGLIIWL 106
>gi|427728049|ref|YP_007074286.1| shikimate kinase [Nostoc sp. PCC 7524]
gi|427363968|gb|AFY46689.1| shikimate kinase [Nostoc sp. PCC 7524]
Length = 183
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY + T ++ AK++I+ EG +
Sbjct: 4 LLQGVNLYLIGMMGAGKTTVGQLLAKQLGYGFIDTDNVIAQSAKKSINQIFAEEGEATFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL + ++ + VAT G G R + W +L+ G VWL
Sbjct: 64 QLESDVLGQVCAYTKLTVATGG---GIVLRRENWSYLHHGLIVWL 105
>gi|119512821|ref|ZP_01631889.1| shikimate kinase [Nodularia spumigena CCY9414]
gi|119462543|gb|EAW43512.1| shikimate kinase [Nodularia spumigena CCY9414]
Length = 192
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L T ++ A ++I+ EG +
Sbjct: 15 LLQGVNLYLIGMMGAGKTTVGQLLAKHLGYGFLDTDSVITQSAGRSINQLFAEEGEAAFR 74
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL + ++ R +AT G G R + W +L+ G VWL
Sbjct: 75 QLESDVLAQVCAYTRLTIATGG---GIILRTENWSYLHHGLVVWL 116
>gi|86609195|ref|YP_477957.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|115312166|sp|Q2JKT7.1|AROK_SYNJB RecName: Full=Shikimate kinase; Short=SK
gi|86557737|gb|ABD02694.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +++L+G V ELA L + T L+E +I G +
Sbjct: 10 LRGVNVYLIGMMGSGKSTVGSELAAQLRFQFFDTDGLVEQVGGSSIAQIFAEHGEAYFRD 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS+ R V+AT G G R W +L+ G TVWL
Sbjct: 70 LETQVLAQLSSYTRLVIATGG---GIVLRPKNWSYLHHGLTVWL 110
>gi|75906776|ref|YP_321072.1| shikimate kinase [Anabaena variabilis ATCC 29413]
gi|115312135|sp|Q3MFQ9.1|AROK_ANAVT RecName: Full=Shikimate kinase; Short=SK
gi|75700501|gb|ABA20177.1| shikimate kinase [Anabaena variabilis ATCC 29413]
Length = 181
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L T ++ AK++I+ G
Sbjct: 4 LLQGVNLYLIGMMGAGKTTVGHLLAQELGYGFLDTDNVIAQAAKKSINEIFAEAGEAGFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL + S+ + VAT G G R + W +L+ G VWL
Sbjct: 64 QIESDVLAQVCSYTKLTVATGG---GIVLRRENWSYLHHGLIVWL 105
>gi|428209800|ref|YP_007094153.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
gi|428011721|gb|AFY90284.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
Length = 185
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 179 GSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGS 238
G LLKG +++LVG + LA LGY + T ++E +++I+ +G
Sbjct: 2 GDSDLLKGINLYLVGMMGAGKTTIGKILAAQLGYGFVDTDAVIEQLTQKSINQIFAEKGE 61
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL + ++ R ++T G G R + W +L+ G VWL
Sbjct: 62 TTFRQIETKVLSEVCAYTRLAISTGG---GIVLRRENWSYLHYGLIVWL 107
>gi|282900529|ref|ZP_06308473.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
gi|281194582|gb|EFA69535.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
Length = 188
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
QLLKG +++L+G + LA + Y+ + T E++ A + I + EG +
Sbjct: 7 QLLKGVNLYLIGMMGSGKTTIGNLLAQAVNYSFIDTDEVIVKAAGKPISDIFITEGEPAF 66
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E +VL + ++ + +AT G G R + W +L+ G +WL
Sbjct: 67 RQLESNVLAQVCAYTKLTIATGG---GIVLRRENWSYLHHGLIIWLD 110
>gi|300865613|ref|ZP_07110388.1| shikimate kinase [Oscillatoria sp. PCC 6506]
gi|300336397|emb|CBN55538.1| shikimate kinase [Oscillatoria sp. PCC 6506]
Length = 176
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M LL+G +++LVG V LA LGY T +++ A +I +G ++
Sbjct: 1 MDLLRGVNLYLVGMMGAGKTTVGRWLASELGYHFFDTDDVISKVANLSISEIFARDGEEA 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LS++ + +VAT G G R W +L+ G VWL
Sbjct: 61 FRQLESQVLGELSAYKKLIVATGG---GIVLRQMNWSYLHHGIVVWLD 105
>gi|257058860|ref|YP_003136748.1| shikimate kinase [Cyanothece sp. PCC 8802]
gi|256589026|gb|ACU99912.1| Shikimate kinase [Cyanothece sp. PCC 8802]
Length = 187
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD 239
+ +LL+G +I+L+G + LA L Y T L+E +Q+I+ + +G
Sbjct: 3 TQKLLQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIERVTQQSINDIFVTQGET 62
Query: 240 SVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL +++ R+V+AT GG G + W +L+ G +WL
Sbjct: 63 VFRDIETQVLSEVAACTRSVIAT-GG--GIVLNSQNWSYLHHGLIIWL 107
>gi|218245814|ref|YP_002371185.1| shikimate kinase [Cyanothece sp. PCC 8801]
gi|226729123|sp|B7JZT6.1|AROK_CYAP8 RecName: Full=Shikimate kinase; Short=SK
gi|218166292|gb|ACK65029.1| Shikimate kinase [Cyanothece sp. PCC 8801]
Length = 187
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD 239
+ +LL+G +I+L+G + LA L Y T L+E +Q+I+ + +G
Sbjct: 3 TQKLLQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIERVTQQSINDIFVTQGET 62
Query: 240 SVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL +++ R+V+AT GG G + W +L+ G +WL
Sbjct: 63 VFRDIETQVLSEVAACTRSVIAT-GG--GIVLNSQNWSYLHHGLIIWL 107
>gi|218438870|ref|YP_002377199.1| shikimate kinase [Cyanothece sp. PCC 7424]
gi|218171598|gb|ACK70331.1| Shikimate kinase [Cyanothece sp. PCC 7424]
Length = 184
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG SIFLVG V LA L Y + +++ QTI +G D
Sbjct: 4 LLKGLSIFLVGLPGTGKTTVGQGLAEQLDYRFFDSDVVIKKVTGQTIKEIFATQGEDFFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL L ++ R+V+AT G G + W +L G +WL
Sbjct: 64 ELESQVLRELCAYTRSVIATGG---GIILKQINWSYLRHGLIIWLD 106
>gi|412985827|emb|CCO17027.1| shikimate kinase [Bathycoccus prasinos]
Length = 305
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+ +S+FL+G V +LA LGY T +L+E KQ + +G +
Sbjct: 83 LQSSSVFLLGLMGTGKTTVGKKLADALGYGYFDTDQLIEQICKQKVHEIFEEDGEEGFRE 142
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +L ++S+ R VV+T G G + W HL+ G TV L
Sbjct: 143 TESAILAEVASYKRVVVSTGG---GIVTVRNNWMHLHNGVTVCL 183
>gi|86607258|ref|YP_476021.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
gi|115312165|sp|Q2JRJ6.1|AROK_SYNJA RecName: Full=Shikimate kinase; Short=SK
gi|86555800|gb|ABD00758.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
Length = 189
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +++L+G + ELA L T L+E A +I +G
Sbjct: 10 LRGVTVYLIGMMASGKSTLGAELAAQLRRPFFDTDALVEQVAGCSIAQIFAEQGEAHFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LS + R VVAT G G R W +L+ G TVWL
Sbjct: 70 LETQVLAQLSGYTRLVVATGG---GIVLRPKNWSYLHHGLTVWL 110
>gi|428319260|ref|YP_007117142.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428242940|gb|AFZ08726.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 183
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M L+G +I+LVG V LA L Y T EL+ Q+I EG ++
Sbjct: 1 MDGLRGVNIYLVGMMGAGKTTVGRILAKKLKYRFFDTDELIVRVTNQSIAEIFDREGEEA 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LS++ +VVAT G G R+ W +L+ G VWL
Sbjct: 61 FRELETKVLGELSAYKNSVVATGG---GIVTRSMNWGYLHYGVVVWLD 105
>gi|119491298|ref|ZP_01623352.1| shikimate kinase [Lyngbya sp. PCC 8106]
gi|119453462|gb|EAW34624.1| shikimate kinase [Lyngbya sp. PCC 8106]
Length = 193
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA Y + T E++ A Q+I+ +G ++
Sbjct: 4 LLRGINLYLIGMMGAGKTTVGKLLAKQFNYRFIDTDEVITQVAGQSINQIFTEQGEEAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL L +H R VVAT GG RA+ W +L G VWL
Sbjct: 64 TLESQVLSGLCAHQRLVVATGGGI--ILQRAN-WGYLRHGLIVWLD 106
>gi|157412463|ref|YP_001483329.1| shikimate kinase [Prochlorococcus marinus str. MIT 9215]
gi|157387038|gb|ABV49743.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 185
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKIIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
EG D+ E + L+ + + ++V + GG G +++ W L G W+
Sbjct: 63 KDEGEDNFRELEANCLKE-TIKIPSLVISTGG--GIVTKSENWGILRQGIIAWI 113
>gi|427714678|ref|YP_007063302.1| shikimate kinase [Synechococcus sp. PCC 6312]
gi|427378807|gb|AFY62759.1| shikimate kinase [Synechococcus sp. PCC 6312]
Length = 188
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GT+++L+G ELA LGY + T L+E A Q++ G +
Sbjct: 14 LNGTNLYLIGMMGSGKTTTGQELAAALGYRFMDTDRLIEQVAGQSVSEIFAQAGEATFRQ 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +S + VVAT G G W +L+ G +WL
Sbjct: 74 LETQVLAEVSCYHHLVVATGG---GIILEPMNWSYLHHGLVIWL 114
>gi|440682487|ref|YP_007157282.1| shikimate kinase [Anabaena cylindrica PCC 7122]
gi|428679606|gb|AFZ58372.1| shikimate kinase [Anabaena cylindrica PCC 7122]
Length = 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L T +++ A ++I+ + EG
Sbjct: 4 LLRGVNLYLIGMMGVGKTTVGRLLAKELGYGFLDTDDVIVKAAGKSINEIFVDEGEAEFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E DVL + ++ + +AT G G R + W +L G VWL
Sbjct: 64 QLESDVLAQVCAYTKLTIATGG---GIVLRRENWGYLRHGLIVWLD 106
>gi|254526222|ref|ZP_05138274.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
gi|221537646|gb|EEE40099.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
Length = 185
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKIIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
EG D+ E + L+ + + ++V + GG G + + W L G W+
Sbjct: 63 KDEGEDNFRELEANCLKE-TIKIPSLVISTGG--GIVTKPENWGILRQGIIAWI 113
>gi|397566788|gb|EJK45217.1| hypothetical protein THAOC_36180 [Thalassiosira oceanica]
Length = 278
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLG-YTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L+G +++L+G V LA +G Y L T +LE +I EG D+
Sbjct: 85 LRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGEDAFR 144
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL+S+ +HVR V+ T G G R W L G ++L
Sbjct: 145 DAEAQVLDSVHAHVRCVIGTGG---GLVTRNQNWAKLQTGLVLYL 186
>gi|443323785|ref|ZP_21052788.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
gi|442786571|gb|ELR96301.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
Length = 183
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG +++LVG + LA L Y + +LE A+ I EG +
Sbjct: 8 LKGINVYLVGMMGTGKSTIGQILAHNLEYRFFDSDTVLERVAQANITEIFATEGEEVFRE 67
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL L ++ R+V+AT G G + W +L+ G +WL
Sbjct: 68 LETQVLSQLCAYTRSVIATGG---GVVLKPKNWSYLHHGLVIWL 108
>gi|397609609|gb|EJK60447.1| hypothetical protein THAOC_19201 [Thalassiosira oceanica]
Length = 282
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLG-YTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L+G +++L+G V LA +G Y L T +LE +I EG D+
Sbjct: 89 LRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGEDAFR 148
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL+S+ +HVR V+ T G G R W L G ++L
Sbjct: 149 DAEAQVLDSVHAHVRCVIGTGG---GLVTRNQNWAKLQTGLVLYL 190
>gi|427416801|ref|ZP_18906984.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
gi|425759514|gb|EKV00367.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
Length = 188
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD 239
+ +LLKGT+++LVG + LA L Y + T +++ Q+I+ A+G
Sbjct: 2 TTELLKGTNLYLVGMMGSGKTTIGKHLAKLLNYRFIDTDDVIVQATGQSINDIFAAQGEA 61
Query: 240 SVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
+ + E VL ++ + V+AT GG + W +L +G VW++
Sbjct: 62 AFRDIETQVLGQVAPYTHTVIATGGGM---VIKQQNWSYLQSGLVVWIN 107
>gi|254422265|ref|ZP_05035983.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
gi|196189754|gb|EDX84718.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
Length = 239
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LK T+++L+G + +LA LGY + T L+E A QT+ + G
Sbjct: 38 LKKTNLYLIGMMGAGKTTIGRKLANRLGYGFVDTDALIEQSANQTVSELFASAGESVFRQ 97
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +S++ VVAT G G W +L+ G +WL
Sbjct: 98 LETQVLSQVSTYTNLVVATGG---GVIIEQMNWSYLHHGIIIWL 138
>gi|219127919|ref|XP_002184173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404404|gb|EEC44351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 277
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLG-YTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L G++++ VG V LA +G Y L T E++E TI AEG +
Sbjct: 84 LNGSNVYFVGIMGSGKSAVGDILARRMGTYNFLDTDEIIERATGMTIPEIFKAEGEEGFR 143
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+S+ +VR +++T G G + + W L G VWL
Sbjct: 144 TVEAQVLDSVHPYVRCIISTGG---GIVIKLENWSKLQTGLVVWL 185
>gi|443324667|ref|ZP_21053405.1| shikimate kinase [Xenococcus sp. PCC 7305]
gi|442795735|gb|ELS05084.1| shikimate kinase [Xenococcus sp. PCC 7305]
Length = 187
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G + LA L Y T L+E A++TI EG
Sbjct: 17 LLKGVNVYLIGMMGSGKSTIGKILAQKLNYRFFDTDVLIEKVAQKTIPEIFATEGEAYFR 76
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL +S++ +V+AT GG + W L G VWL
Sbjct: 77 DLETKVLHEVSAYNHSVIATGGGM---IQKTVNWSFLRQGLIVWL 118
>gi|427724186|ref|YP_007071463.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
gi|427355906|gb|AFY38629.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
Length = 186
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +I+L+G +A +A + Y L + +++E A +I + G +
Sbjct: 4 LLKGLNIYLIGMMGTGKSTLAKIIAEIMNYRVLDSDDIIEQLAGTSISNIFAEMGEEEFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL ++ R VVAT G G D W +L G T+WL
Sbjct: 64 KLETQVLGKIAVQTRTVVATGG---GIILSNDNWYYLQQGLTIWLD 106
>gi|145357115|ref|XP_001422768.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583011|gb|ABP01085.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L TS+FL+G V LA LGY L T EL+++ K+T S + AE +S
Sbjct: 5 LADTSLFLIGIMGSGKSTVGASLAKALGYNHLDTDELIKSVTKKT-PSELFAEAGESEFR 63
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +L ++++ R V++T G G W HL+ G TV L
Sbjct: 64 AIESMILAEVAAYKRCVISTGG---GIVCEKTNWMHLHNGVTVRL 105
>gi|428297809|ref|YP_007136115.1| shikimate kinase [Calothrix sp. PCC 6303]
gi|428234353|gb|AFZ00143.1| shikimate kinase [Calothrix sp. PCC 6303]
Length = 181
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++LVG + LA LGY + + +++ A + I +G D+
Sbjct: 4 LLKGLNLYLVGMMGAGKTTLGRLLAKDLGYGFVDSDDVITKAAGKNISQIFAEDGEDAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E DVL +++ R +AT G G + + W +L G VWL
Sbjct: 64 QLESDVLGQIAAFTRLTIATGG---GIILKRENWSYLRQGLVVWLD 106
>gi|443316765|ref|ZP_21046197.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
gi|442783620|gb|ELR93528.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
Length = 221
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+ S++LVG + LA L Y T L+E A+++I G +
Sbjct: 34 LLRNVSLYLVGMMGAGKSTLGKRLAAVLKYRFFDTDTLIEQTAQRSIGDIFAEAGESTFR 93
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E V+ L+ + R VV+T GG R + W HL G VW+
Sbjct: 94 DLETAVIRELAPYTRIVVSTGGGM---VLRRENWGHLRQGVVVWV 135
>gi|224007048|ref|XP_002292484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972126|gb|EED90459.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 293
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLG-YTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L+G +++ +G V LA +G Y L T +LE A +I EG ++
Sbjct: 100 LQGCNLYFIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAAGMSIPKIFQTEGEEAFR 159
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+S+ +HVR VV+T GG R W L G V+L
Sbjct: 160 EAEAQVLDSVHAHVRCVVSTGGGM---ILRNQNWSKLQTGLVVYL 201
>gi|428220177|ref|YP_007104347.1| shikimate kinase [Synechococcus sp. PCC 7502]
gi|427993517|gb|AFY72212.1| shikimate kinase [Synechococcus sp. PCC 7502]
Length = 184
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+L GT+I+L+G + LA L Y + T L+E K+T+ G
Sbjct: 1 MLDGTNIYLIGMMGAGKSTIGKLLADRLNYRFVDTDSLVEACTKRTVAQIFAESGESGFR 60
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +S++ R VVAT G G W HL G VWL
Sbjct: 61 QIEHQVLSEVSAYTRLVVATGG---GIVLDRLNWSHLRNGLVVWL 102
>gi|17228739|ref|NP_485287.1| shikimate kinase [Nostoc sp. PCC 7120]
gi|60389805|sp|Q8YXG9.1|AROK_ANASP RecName: Full=Shikimate kinase; Short=SK
gi|17130591|dbj|BAB73201.1| shikimate kinase [Nostoc sp. PCC 7120]
Length = 181
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L T ++ K++I+ G
Sbjct: 4 LLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATKKSINEIFAEAGEAGFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL + S+ + VAT G G R + W +L+ G +WL
Sbjct: 64 QIESDVLAQVCSYTKLTVATGG---GIVLRRENWSYLHHGLILWL 105
>gi|168031989|ref|XP_001768502.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680215|gb|EDQ66653.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+GT IFL+G V LA LGY + +L++ Q D ++E +
Sbjct: 112 LQGTCIFLIGMMDNGKASVGKMLAKELGYYFFDSNDLVQ----QAADGEEISENEEGYRE 167
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL+ LSS R VVAT G + W +L G VW+
Sbjct: 168 AETEVLKQLSSMGRLVVAT---GAGTVLNTENWGYLRHGIVVWI 208
>gi|434396920|ref|YP_007130924.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
gi|428268017|gb|AFZ33958.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
Length = 182
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G SI+L+G + LA L Y T L+E +Q+I G D+
Sbjct: 7 QSLHGISIYLIGMMGVGKTTIGKLLAHQLNYRFFDTDVLIERVTQQSIPEIFAESGEDNF 66
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+ +S ++V+AT G G R W +L G +WL
Sbjct: 67 RELEHQVLQEISVETKSVIATGG---GIVERQINWSYLQQGLIIWL 109
>gi|428218974|ref|YP_007103439.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
gi|427990756|gb|AFY71011.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
Length = 196
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 175 SLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWML 234
SL + +L+G ++FL+G V A LGY + T + +E++A ++I
Sbjct: 2 SLKSKQTSMLQGVNLFLIGMMGAGKSTVGKLAAQRLGYHFIDTDDTIESYAGKSIPQIFA 61
Query: 235 AEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E +VL +S++ VVAT G G W HL++G WL
Sbjct: 62 DSGEAEFRQIEHNVLMQVSAYRNLVVATGG---GIVVDRQNWAHLHSGVVAWL 111
>gi|302770076|ref|XP_002968457.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
gi|300164101|gb|EFJ30711.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
Length = 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGS-DSVV 242
LKGT +FL+G V L+ LGY + +L+E A + + + + +
Sbjct: 95 LKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEEGFR 154
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LS R VVAT G GA R W ++ G TV+L
Sbjct: 155 DAESEVLSQLSGMYRLVVATGG---GAVVRPQNWGYMRHGITVYL 196
>gi|302774428|ref|XP_002970631.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
gi|300162147|gb|EFJ28761.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
Length = 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGS-DSVV 242
LKGT +FL+G V L+ LGY + +L+E A + + + + +
Sbjct: 95 LKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEEGFR 154
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LS R VVAT G GA R W ++ G TV+L
Sbjct: 155 DAESEVLSQLSGMYRLVVATGG---GAVVRPQNWGYMRHGITVYL 196
>gi|434393629|ref|YP_007128576.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
gi|428265470|gb|AFZ31416.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
Length = 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+LKG +++LVG V LA LGY + T E++ +Q+I G +
Sbjct: 10 VLKGVNLYLVGMMGTGKTTVGRALATKLGYRFVDTDEIITQVTQQSISEVFATSGEAAFR 69
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL + ++ +AT G G + + W +L+ G VWL
Sbjct: 70 QIETQVLAKVCAYTHLAIATGG---GIVLQRENWSYLHHGLIVWL 111
>gi|427704162|ref|YP_007047384.1| shikimate kinase [Cyanobium gracile PCC 6307]
gi|427347330|gb|AFY30043.1| shikimate kinase [Cyanobium gracile PCC 6307]
Length = 215
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +I+LVG V LA LGY + L A + I ++G D
Sbjct: 20 LDGLNIYLVGMMGAGKSAVGRPLAEALGYRFIDADTALGEVAGRPIAEIFASDGEDGFRT 79
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL ++S VVAT G GA R + W H+ G VWL
Sbjct: 80 LETAVLNGIASWHSLVVATGG---GAVIRPENWGHMRQGLVVWL 120
>gi|113475204|ref|YP_721265.1| shikimate kinase [Trichodesmium erythraeum IMS101]
gi|110166252|gb|ABG50792.1| shikimate kinase [Trichodesmium erythraeum IMS101]
Length = 184
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+LL+G +++LVG V LA LGY+ L T L+ A ++I+ EG +
Sbjct: 7 KLLQGVNLYLVGMMGAGKTTVGHLLAQHLGYSFLDTDNLITQAAGKSINEIFATEGEAAF 66
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E ++L +SS+ +AT G G W +L G VWL
Sbjct: 67 RELETNILSEISSYKNLTIATGG---GIVISRFNWSYLRHGIVVWL 109
>gi|428775242|ref|YP_007167029.1| shikimate kinase [Halothece sp. PCC 7418]
gi|428689521|gb|AFZ42815.1| shikimate kinase [Halothece sp. PCC 7418]
Length = 182
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 183 LLKGTSIFLVG----DSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGS 238
LL+G +++L+G T V + VA +L Y T EL+ Q I G
Sbjct: 9 LLQGLNLYLIGMMGVGKTAVGQAVAQQLT----YRFFDTDELITRVQGQAITEIFAKAGE 64
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
D E VL+ LS++ R+V+AT G G + W L G VWL
Sbjct: 65 DYFRELETKVLQELSAYARSVIATGG---GIILQNQNWSFLQQGLVVWLD 111
>gi|318042493|ref|ZP_07974449.1| shikimate kinase [Synechococcus sp. CB0101]
Length = 207
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L+G +++LVG LA LGY L +E A ++I +EG
Sbjct: 10 QRLEGLNLYLVGMMGSGKSTAGRHLAELLGYRFLDADSSIEQVAGRSIPEVFASEGEAGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
E VL ++S VVAT G G R D W L+ G +WL E +
Sbjct: 70 RQLEAAVLNQIASWHSLVVATGG---GVVTRPDNWGQLHQGVVIWLDAPEEL 118
>gi|428211742|ref|YP_007084886.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
gi|428000123|gb|AFY80966.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
Length = 182
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q LKG +++L+G VA LA L Y L + L+E A Q+I G +
Sbjct: 3 QFLKGCNLYLIGMMGSGKTTVAQILAPQLEYRYLDSDRLIEQVAGQSIPEIFAESGEAAF 62
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL L ++ VVAT G G W +L G VWL
Sbjct: 63 RELETKVLSELCAYTHLVVATGG---GIILNRQNWSYLQHGVVVWLD 106
>gi|376003244|ref|ZP_09781058.1| shikimate kinase I [Arthrospira sp. PCC 8005]
gi|375328404|emb|CCE16811.1| shikimate kinase I [Arthrospira sp. PCC 8005]
Length = 194
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G +I+L+G V LA L Y T L+ A Q I +G +
Sbjct: 13 LEQIQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQVAGQAIPEIFATQGEEE 72
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
N E VL SL ++ VVAT G G + W +L G VWL
Sbjct: 73 FRNLESQVLSSLCAYQHLVVATGG---GVVIKRTNWSYLRHGIIVWLD 117
>gi|297605427|ref|NP_001057199.2| Os06g0225800 [Oryza sativa Japonica Group]
gi|75107689|sp|Q5NTH3.1|SK2_ORYSJ RecName: Full=Shikimate kinase 2, chloroplastic; Short=OsSK2;
Flags: Precursor
gi|56805579|dbj|BAD83413.1| shikimate kinase 2 [Oryza sativa Japonica Group]
gi|218197836|gb|EEC80263.1| hypothetical protein OsI_22231 [Oryza sativa Indica Group]
gi|255676848|dbj|BAF19113.2| Os06g0225800 [Oryza sativa Japonica Group]
Length = 307
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG VA LA LGY+ + +L+E + + E S++
Sbjct: 92 LNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFR 151
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 152 DNESSVLRDLSSMRRLVVATGG---GAVIRPVNWKYMKKGLSVWL 193
>gi|126695461|ref|YP_001090347.1| shikimate kinase [Prochlorococcus marinus str. MIT 9301]
gi|126542504|gb|ABO16746.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9301]
Length = 185
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ ++ +KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVHTIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
EG D+ E + L+ + + ++V + GG G +++ W L G W+
Sbjct: 63 NDEGEDNFRELEANCLKE-TIKIPSLVISTGG--GIVTKSENWGILRQGIIAWI 113
>gi|222635237|gb|EEE65369.1| hypothetical protein OsJ_20662 [Oryza sativa Japonica Group]
Length = 272
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG VA LA LGY+ + +L+E + + E S++
Sbjct: 57 LNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFR 116
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 117 DNESSVLRDLSSMRRLVVATGG---GAVIRPVNWKYMKKGLSVWL 158
>gi|209527294|ref|ZP_03275804.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|423066193|ref|ZP_17054983.1| shikimate kinase [Arthrospira platensis C1]
gi|209492282|gb|EDZ92627.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|406712235|gb|EKD07424.1| shikimate kinase [Arthrospira platensis C1]
Length = 194
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G +I+L+G V LA L Y T L+ A Q I +G +
Sbjct: 13 LEQIQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQVAGQAIPEIFATQGEEE 72
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E VL SL ++ VVAT G G + W +L G VWL
Sbjct: 73 FRNLESQVLSSLCAYQHLVVATGG---GVVIKRMNWSYLRHGIIVWL 116
>gi|350538979|ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase, chloroplastic; Flags: Precursor
gi|19349|emb|CAA45121.1| shikimate kinase precursor [Solanum lycopersicum]
Length = 300
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 168 DIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQ 227
D +E+ ++ + L G ++LVG V LA LGY+ L+E Q
Sbjct: 86 DEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAETLGYSFFDCDRLIE----Q 141
Query: 228 TIDSWMLAE-----GSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAG 282
+ +AE G + E +VL LS R VV+T GG A R W+H++ G
Sbjct: 142 AVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVSTGGG---AVVRPINWRHMHKG 198
Query: 283 FTVWLS-QTEAMGK 295
+VWL EA+ K
Sbjct: 199 ISVWLDVPLEALAK 212
>gi|443313787|ref|ZP_21043397.1| shikimate kinase [Synechocystis sp. PCC 7509]
gi|442776200|gb|ELR86483.1| shikimate kinase [Synechocystis sp. PCC 7509]
Length = 188
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G + +A LGY + T ++E K +I G
Sbjct: 9 LLKGVNLYLIGMMGSGKTTIGSLIATELGYGFVDTDAVIEQVTKHSISQLFAEVGEAEFR 68
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVW---------------- 286
E VL + ++ VV+T G G + W +L+ G VW
Sbjct: 69 QIESQVLAEVCAYTNLVVSTGG---GIVTQQKNWSYLHYGLIVWLDVPIKVLYERLKEDN 125
Query: 287 ----LSQTEAMGKLLRVFVLSLHLRSVTSYFVRLEFVSSFSRTNEHIMARKPAVMK 338
L + +GKL +F L + +R+ + S+ ++A P+V+K
Sbjct: 126 TRPLLQAADPLGKLQSIFEQRQPLYNQADLHIRVSEEETASQIANRVIALIPSVLK 181
>gi|78778496|ref|YP_396608.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
gi|78711995|gb|ABB49172.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 185
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKVIKGRSIFLIGMMGCGKSQTGLKLAELLKYKYIDLDSLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
EG D+ E L+ + + ++V + GG G +++ W L G W+
Sbjct: 63 NDEGEDNFRELETSCLKE-TIKIPSLVISTGG--GIVTKSENWGILRQGIIAWID 114
>gi|298490902|ref|YP_003721079.1| shikimate kinase ['Nostoc azollae' 0708]
gi|298232820|gb|ADI63956.1| Shikimate kinase ['Nostoc azollae' 0708]
Length = 181
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L G V LA LGY + T +++ A ++I+ EG +
Sbjct: 4 LLKGVNLYLTGMMGVGKTTVGHLLAHQLGYGFIDTDDVIVKAAGKSINEIFTEEGEAAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E DVL + ++ + +AT G G R + W ++ G VWL
Sbjct: 64 QLESDVLGQVCAYTKLTIATGG---GIVLRRENWGYMRHGLIVWLD 106
>gi|116787038|gb|ABK24350.1| unknown [Picea sitchensis]
Length = 318
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD-SVV 242
LKG I+LVG V L+ LGY + +L+E + + + E ++
Sbjct: 117 LKGKCIYLVGMMGSGKTTVGKILSEVLGYYFFDSDQLVEEASGGASVAQIFKERNEQGFR 176
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL+ LS+ R V+AT GG A R W ++ G TVWL
Sbjct: 177 DSESEVLKQLSTMYRLVIATGGG---AVVRPQNWNYMRQGITVWL 218
>gi|33239580|ref|NP_874522.1| shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|81665111|sp|Q7VE85.1|AROK_PROMA RecName: Full=Shikimate kinase; Short=SK
gi|33237105|gb|AAP99174.1| Shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 190
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G I+LVG LA L Y+ + EL+E AK ++ EG + +
Sbjct: 14 LGGRIIYLVGMMGSGKSTTGPHLAKLLKYSFIDQDELIEKVAKSSVSQIFREEGENGFRD 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL+ + VVAT G G R++ W L+ G +WL
Sbjct: 74 IETQVLKQIGQRHSLVVATGG---GLVTRSENWGVLHQGIVIWLD 115
>gi|72383312|ref|YP_292667.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
gi|115312159|sp|Q46HR4.1|AROK_PROMT RecName: Full=Shikimate kinase; Short=SK
gi|72003162|gb|AAZ58964.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
Length = 198
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +IFL+G + LA + Y + T +++E +KQ+I S +G +
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSISSIFEKDGEKVFRD 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+ +S H V+AT G G + W L+ G +WL
Sbjct: 74 VEKKVLKEISQHHSLVIATGG---GLVTLPENWGILHQGIVIWL 114
>gi|123967661|ref|YP_001008519.1| shikimate kinase [Prochlorococcus marinus str. AS9601]
gi|123197771|gb|ABM69412.1| Shikimate kinase [Prochlorococcus marinus str. AS9601]
Length = 185
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG SIFL+G K L+LA L Y + L+E AK++I+ EG +
Sbjct: 13 LKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKLAKKSINQIFNDEGEEKFRE 72
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L+ + + ++V + GG G +++ W L G W+
Sbjct: 73 LEANCLKE-TIKIPSLVISTGG--GIVTKSENWGILRQGIIAWI 113
>gi|124024892|ref|YP_001014008.1| shikimate kinase [Prochlorococcus marinus str. NATL1A]
gi|123959960|gb|ABM74743.1| Shikimate kinase [Prochlorococcus marinus str. NATL1A]
Length = 198
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +IFL+G + LA + Y + T +++E +KQ+I S +G +
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSISSIFEKDGEKVFRD 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+ +S H V+AT G G + W L+ G +WL
Sbjct: 74 VEKKVLKEISQHHSLVIATGG---GLVTLPENWGILHQGIVIWL 114
>gi|145329214|ref|NP_001077936.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252148|gb|AEC07242.1| Shikimate kinase [Arabidopsis thaliana]
Length = 276
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|282898123|ref|ZP_06306118.1| Shikimate kinase [Raphidiopsis brookii D9]
gi|281197267|gb|EFA72168.1| Shikimate kinase [Raphidiopsis brookii D9]
Length = 167
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 176 LTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLA 235
+ A Q LKG +++L+G + LA + Y+ + T E++ A + I
Sbjct: 1 MDASIKQSLKGVNLYLIGMMGSGKTTIGSLLAQAVNYSFIDTDEVIVKAAGKPISDIFTT 60
Query: 236 EGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
EG + E +VL + ++ + +AT G G R + W +L+ G +WL
Sbjct: 61 EGETAFRQLESNVLAQVCAYTKLTIATGG---GIVLRRENWSYLHHGLIIWL 109
>gi|4417286|gb|AAD20411.1| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 292
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|39104605|dbj|BAC43483.2| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 303
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|30681570|ref|NP_179785.2| Shikimate kinase [Arabidopsis thaliana]
gi|145329577|ref|NP_001077938.1| Shikimate kinase [Arabidopsis thaliana]
gi|145362131|ref|NP_973507.2| Shikimate kinase [Arabidopsis thaliana]
gi|209572588|sp|Q9SJ05.2|SK1_ARATH RecName: Full=Shikimate kinase 1, chloroplastic; Short=AtSK1;
Flags: Precursor
gi|330252146|gb|AEC07240.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252147|gb|AEC07241.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252150|gb|AEC07244.1| Shikimate kinase [Arabidopsis thaliana]
Length = 303
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|255572361|ref|XP_002527119.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223533542|gb|EEF35282.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 282
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVV 242
LKG +FLVG V L+ LGYT + + E +E T ++ G D
Sbjct: 100 LKGCCVFLVGMMGSGKTTVGKILSEALGYTFVDSDEYVEQTAGGNSVSHIFQQYGEDYFR 159
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E + L+ LS R VVAT G G+ R W+++ G TV+L
Sbjct: 160 DIESEALQKLSIIPRQVVATGG---GSVVRPINWKYMRQGITVFL 201
>gi|308805879|ref|XP_003080251.1| unnamed protein product [Ostreococcus tauri]
gi|116058711|emb|CAL54418.1| unnamed protein product [Ostreococcus tauri]
Length = 241
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G S+ +VGD+ N+ VA LA GY +S L+E+ A D E + +
Sbjct: 44 LEAMRGVSVCVVGDNERANDGVARALAKRFGYACVSVPALVESAASAVNDEDEDDESAAA 103
Query: 241 VVNGECDVLES-----LSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
+ +LE+ LS+++R VAT GG +GA AR D W L+ TVW+ + A
Sbjct: 104 SPEAKRLMLENSAHEQLSTYLRLCVATSGGGRGATARGDCWTWLFGMITVWVDEEGA 160
>gi|37522279|ref|NP_925656.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
gi|81709329|sp|Q7NH27.1|AROK_GLOVI RecName: Full=Shikimate kinase; Short=SK
gi|35213279|dbj|BAC90651.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
Length = 177
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+LKG S++LVG V LA LGY + L+E + + + EG
Sbjct: 1 MLKGVSLYLVGMMGSGKSTVGRLLAEKLGYGFVDLDALIEQVSGKRVGEIFEREGEAVFR 60
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL +S++ R VVAT GG AR + W +L+ G VWL
Sbjct: 61 DLESRVLAEVSAYTRLVVATGGGV--VLARRN-WGYLHHGVVVWL 102
>gi|189303601|gb|ACD85800.1| At2g21940 [Arabidopsis thaliana]
Length = 303
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|145329216|ref|NP_001077937.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252149|gb|AEC07243.1| Shikimate kinase [Arabidopsis thaliana]
Length = 304
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 101 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 160
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 161 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 202
>gi|411118274|ref|ZP_11390655.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
gi|410711998|gb|EKQ69504.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
Length = 190
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +++L+G V +A LGY T ++E Q I + G
Sbjct: 9 LQGINLYLIGMMGAGKTTVGRLIAQALGYQFFDTDAVIEQVTGQPITALFTEMGEAGFRE 68
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LS++ R +AT G G R + W +L G VWL
Sbjct: 69 LETRVLAELSTYTRLAIATGG---GIVLRHENWGYLRHGVIVWLD 110
>gi|158337774|ref|YP_001518950.1| shikimate kinase [Acaryochloris marina MBIC11017]
gi|158308015|gb|ABW29632.1| shikimate kinase [Acaryochloris marina MBIC11017]
Length = 182
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG +++LVG LA LGY + T +L+ Q I G D
Sbjct: 4 LKGVNLYLVGMMGCGKSTTGRALAKQLGYGFVDTDDLITQLTGQAITDIFAESGEDHFRQ 63
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL +++H VVAT G G W L G +WL
Sbjct: 64 VESKVLSEVAAHTNLVVATGG---GIVLDKKNWSFLQHGLVIWLD 105
>gi|291569159|dbj|BAI91431.1| shikimate kinase [Arthrospira platensis NIES-39]
Length = 184
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G +I+L+G V LA L Y T L+ + Q I +G +
Sbjct: 3 LEQIQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQVSGQAIPEIFSTQGEEE 62
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E VL SL ++ VVAT G G + W +L G VWL
Sbjct: 63 FRNLESQVLSSLCAYQHLVVATGG---GVVIKRMNWSYLRHGIIVWL 106
>gi|434405733|ref|YP_007148618.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
gi|428259988|gb|AFZ25938.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
Length = 184
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G V LA LGY + T ++ A ++I+ +G +
Sbjct: 4 LLKGVNLYLIGMMGVGKTTVGRLLAQQLGYGFVDTDNVIVQAAGKSINELFADKGEAAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL + + + +AT G G + + W +L+ G VWL
Sbjct: 64 QLESDVLAQVCAFTKLTIATGG---GIVLKRENWGYLHHGLIVWL 105
>gi|409989186|ref|ZP_11272878.1| shikimate kinase [Arthrospira platensis str. Paraca]
gi|409939933|gb|EKN80923.1| shikimate kinase [Arthrospira platensis str. Paraca]
Length = 204
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G +I+L+G V LA L Y T L+ + Q I +G +
Sbjct: 23 LEQIQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQVSGQAIPEIFSTQGEEE 82
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E VL SL ++ VVAT G G + W +L G VWL
Sbjct: 83 FRNLESQVLSSLCAYQHLVVATGG---GVVIKRMNWSYLRHGIIVWL 126
>gi|30692396|ref|NP_195664.2| shikimate kinase 2 [Arabidopsis thaliana]
gi|42573237|ref|NP_974715.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|75151384|sp|Q8GY88.1|SK2_ARATH RecName: Full=Shikimate kinase 2, chloroplastic; Short=AtSK2;
Flags: Precursor
gi|26450651|dbj|BAC42436.1| putative shikimate kinase [Arabidopsis thaliana]
gi|28950863|gb|AAO63355.1| At4g39540 [Arabidopsis thaliana]
gi|332661683|gb|AEE87083.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661684|gb|AEE87084.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 300
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V +A LGYT L+E K T + + +SV
Sbjct: 96 LNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFR 155
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L+ LS VV + GG GA R W++++ G ++WL
Sbjct: 156 EKETEALKKLSLMYHQVVVSTGG--GAVIRPINWKYMHKGISIWL 198
>gi|78183927|ref|YP_376362.1| shikimate kinase [Synechococcus sp. CC9902]
gi|124053405|sp|Q3B009.1|AROK_SYNS9 RecName: Full=Shikimate kinase; Short=SK
gi|78168221|gb|ABB25318.1| shikimate kinase [Synechococcus sp. CC9902]
Length = 191
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G SI+L+G LA LGY + ++E A TI +G +
Sbjct: 12 LSGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQVAGCTIPEIFERDGEAGFRS 71
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
E VL ++S VVAT G G + + W L++G VWL A
Sbjct: 72 IESQVLNAISQRHSLVVATGG---GVVTKPENWGQLHSGIVVWLDVNRA 117
>gi|384247569|gb|EIE21055.1| shikimate kinase, partial [Coccomyxa subellipsoidea C-169]
Length = 178
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G+S++LVG V +A L Y + + +L+E A T+ A+G + +
Sbjct: 1 LDGSSLYLVGMMGSGKSTVGKMVAAALEYPYVDSDKLIEERAGCTVAQIFAAQGEQAFRD 60
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL+ L++ +AV+ + GG G R W+ + G +WL+
Sbjct: 61 LESSVLQELAAS-KAVMVSTGG--GVVTREQNWESMRHGLVIWLT 102
>gi|194476762|ref|YP_002048941.1| shikimate kinase [Paulinella chromatophora]
gi|171191769|gb|ACB42731.1| shikimate kinase [Paulinella chromatophora]
Length = 187
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +I+LVG + LA L Y+ T ++LE Q I G +
Sbjct: 10 LQGLNIYLVGIMGSGKSTIGKPLATALNYSFADTDDVLENATGQNISDIFSVNGESHFRS 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +S + VVAT G G ++ W ++ G VWL
Sbjct: 70 LEHKVLSEISHYHSLVVATGG---GVVINSNNWGIMHQGIVVWL 110
>gi|428779039|ref|YP_007170825.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
gi|428693318|gb|AFZ49468.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
Length = 186
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +I+LVG V E+A L Y T +L+ + I +G
Sbjct: 9 LLQGLNIYLVGLMGVGKTAVGKEIAQQLNYRFFDTDDLIIRVEGKAITDIFAQKGETYFR 68
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+ LS R+V+AT G G + + W L G VWL
Sbjct: 69 ELETKVLQELSVCTRSVIATGG---GIIMKKENWSFLQQGLVVWL 110
>gi|414079234|ref|YP_007000658.1| shikimate kinase [Anabaena sp. 90]
gi|413972513|gb|AFW96601.1| shikimate kinase [Anabaena sp. 90]
Length = 178
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
+ +LKG +++L+G V LA +GY + T E++ A ++I+ G
Sbjct: 2 IDILKGVNLYLIGMMGVGKTTVGKLLAAEIGYRFVDTDEVIIKAAGKSINEIFAENGEAE 61
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL ++ + +++T G G + W +L+ G +WL
Sbjct: 62 FRQLESDVLAQACAYTKLIISTGG---GVPMQQQNWSYLHHGLIIWL 105
>gi|124021918|ref|YP_001016225.1| shikimate kinase [Prochlorococcus marinus str. MIT 9303]
gi|254806780|sp|A2C650.1|AROK_PROM3 RecName: Full=Shikimate kinase; Short=SK
gi|123962204|gb|ABM76960.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9303]
Length = 192
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G +++LVG LA L Y + T ++E A Q I EG +
Sbjct: 12 QRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFNEEGEEGF 71
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL ++ VVAT GG ++ + W L+ G +WL+
Sbjct: 72 RAMESQVLNAIGQRHSLVVATGGGM---VSKPENWGILHQGIVIWLN 115
>gi|340707718|pdb|3NWJ|A Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
gi|340707719|pdb|3NWJ|B Chain B, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
Length = 250
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
DE+Q + LKK+ E+K L G S++LVG V +A
Sbjct: 28 FDEEQQI--LKKKAEEVK----------------PYLNGRSMYLVGMMGSGKTTVGKIMA 69
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN-GECDVLESLSSHVRAVVATLGGQ 266
LGYT L+E K T + + +SV E + L+ LS VV + GG
Sbjct: 70 RSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG- 128
Query: 267 QGAAARADKWQHLYAGFTVWL 287
GA R W++++ G ++WL
Sbjct: 129 -GAVIRPINWKYMHKGISIWL 148
>gi|148240549|ref|YP_001225936.1| shikimate kinase [Synechococcus sp. WH 7803]
gi|147849088|emb|CAK24639.1| Shikimate kinase [Synechococcus sp. WH 7803]
Length = 191
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G +++LVG LA L Y + ++E A TI EG
Sbjct: 10 QRLGGRNLYLVGMMGSGKTSTGRPLAQRLEYGFVDADAVIEQAAGCTIPDIFKREGESGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
N E VL ++S VVAT G GA R + W ++ G +WL
Sbjct: 70 RNLETQVLSAISQRHSLVVATGG---GAVTRPENWGAMHQGIVIWLD 113
>gi|186686317|ref|YP_001869513.1| shikimate kinase [Nostoc punctiforme PCC 73102]
gi|238691206|sp|B2IX35.1|AROK_NOSP7 RecName: Full=Shikimate kinase; Short=SK
gi|186468769|gb|ACC84570.1| shikimate kinase [Nostoc punctiforme PCC 73102]
Length = 181
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L ++ ++I+ EG
Sbjct: 4 LLQGVNLYLIGMMGVGKTTVGPLLAKHLGYGFLDLDGVIAKATDKSINQLFAEEGEAGFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E DVL + + + +AT G G R + W +L+ G VWL
Sbjct: 64 QIESDVLSQVCAFTKLTIATGG---GIVLRRENWGYLHHGLIVWLD 106
>gi|22298425|ref|NP_681672.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
gi|34222550|sp|Q8DKH7.1|AROK_THEEB RecName: Full=Shikimate kinase; Short=SK
gi|22294604|dbj|BAC08434.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
Length = 183
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +I+LVG LA LGY+ + T ++ F ++ I EG +
Sbjct: 7 LGGANIYLVGMMGAGKTTTGRLLAQRLGYSFVDTDAVITAFRQRPIREIFAQEGEPAFRE 66
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +SS+ VVAT G G W +L+ G VWL
Sbjct: 67 LEQQVLAQVSSYHHLVVATGG---GIVLNPMNWSYLHHGIVVWL 107
>gi|452822420|gb|EME29439.1| shikimate kinase [Galdieria sulphuraria]
Length = 173
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 206 LAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265
LA LGY+ L T +++E +K+ I + G + + E DVL + S+V VVAT G
Sbjct: 13 LARKLGYSFLDTVQIIERASKKEISEILKEYGEEKLREIESDVLNQVQSYVCCVVATEG- 71
Query: 266 QQGAAARADKWQHLYAGFTVWL 287
G + W L+ G V+L
Sbjct: 72 --GVVLKNSNWAVLHNGIVVFL 91
>gi|308811598|ref|XP_003083107.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
gi|116054985|emb|CAL57062.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
Length = 272
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GTS+FL+G V LA +GY L T EL++ K+T G
Sbjct: 51 LVGTSVFLIGIMGTGKSTVGAALAKAMGYKHLDTDELIQGVTKKTPAELFAELGESEFRA 110
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +L ++++ VV+T G G W HL+ G TV L
Sbjct: 111 IESLILAEVAAYKNCVVSTGG---GIVCERTNWMHLHNGVTVRL 151
>gi|116071455|ref|ZP_01468723.1| shikimate kinase [Synechococcus sp. BL107]
gi|116065078|gb|EAU70836.1| shikimate kinase [Synechococcus sp. BL107]
Length = 191
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G SI+L+G LA LGY + ++E A TI +G +
Sbjct: 12 LGGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQVANCTIPEIFERDGEEGFRL 71
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL ++S VVAT G G + + W L++G VWL
Sbjct: 72 IESQVLNAISQRHSLVVATGG---GVVTKPENWGQLHSGIVVWLD 113
>gi|425472135|ref|ZP_18850986.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
gi|389881854|emb|CCI37641.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
Length = 190
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I + EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFVDEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|297821397|ref|XP_002878581.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
gi|297324420|gb|EFH54840.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L G S++LVG V ++ LGY+ L+E T + + ++
Sbjct: 101 FLNGRSMYLVGMMGSGKTTVGKLMSKVLGYSFFDCDSLIEQAMNGTSVAEIFVHHGENFF 160
Query: 243 NG-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 161 RGKETDALKKLSSMYQVVVSTGGG---AVIRPINWKYMHKGISIWL 203
>gi|166364892|ref|YP_001657165.1| shikimate kinase [Microcystis aeruginosa NIES-843]
gi|238687539|sp|B0JFW8.1|AROK_MICAN RecName: Full=Shikimate kinase; Short=SK
gi|166087265|dbj|BAG01973.1| shikimate kinase [Microcystis aeruginosa NIES-843]
Length = 190
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I + EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFVDEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|374256057|gb|AEZ00890.1| putative shikimate kinase 1 protein, partial [Elaeis guineensis]
Length = 164
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V L+ LGY+ + + +L+E + + E S++
Sbjct: 17 LNGHCIYLVGMMGSGKTTVGKILSEVLGYSFIDSDKLVEQAVGVPSVAQIFKEYSEAFFR 76
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LS+ R VVAT GG A R W+++ G TVWL
Sbjct: 77 DNESKVLRDLSTMHRLVVATGGG---AVIRPVNWKYMKQGMTVWL 118
>gi|380505030|gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]
Length = 298
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V +A LGY L+E Q + +AE G
Sbjct: 103 LSGRCIYLVGMMGSGKTTVGRIIAEALGYAFFDCDTLIE----QAVGGTSVAEIFKLHGE 158
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LS +R VV + GG GA R W++++ G +VWL
Sbjct: 159 GFFRDNETEVLRKLS-LMREVVVSTGG--GAVVRPINWRYMHKGISVWL 204
>gi|302769450|ref|XP_002968144.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
gi|300163788|gb|EFJ30398.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
Length = 237
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GT +FLVG VA +++ L Y + +L+E T+ D
Sbjct: 43 LSGTCLFLVGMMGCGKSTVAKDISEALSYEFQDSDKLVEKAIGATVAKIFSDSSEDKFRA 102
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMGKLLRVFVL 302
E + L LS VVAT G GA R + W++L G T++L EA+ + RV
Sbjct: 103 AESEALNQLSETSNVVVATGG---GAVVRDENWRYLKQGITIYLDVPVEALAQ--RVVAA 157
Query: 303 SLHLR 307
L R
Sbjct: 158 GLEKR 162
>gi|33862436|ref|NP_893996.1| shikimate kinase [Prochlorococcus marinus str. MIT 9313]
gi|81578001|sp|Q7V904.1|AROK_PROMM RecName: Full=Shikimate kinase; Short=SK
gi|33640549|emb|CAE20338.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9313]
Length = 192
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G +++LVG LA L Y + T ++E A Q I EG
Sbjct: 12 QRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFSEEGEAGF 71
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL ++ VVAT G G ++ + W L+ G +WL+
Sbjct: 72 RTMESQVLNAIGQRHSLVVATGG---GIVSKPENWGVLHQGIVIWLN 115
>gi|326533332|dbj|BAJ93638.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVV 242
L G I+LVG V LA LGY+ + +L+E ++ G
Sbjct: 94 LNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHGEAFFR 153
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 154 DNESSVLRDLSSMRRLVVATGG---GAVIRPVNWKNMKKGLSVWL 195
>gi|123965355|ref|YP_001010436.1| shikimate kinase [Prochlorococcus marinus str. MIT 9515]
gi|123199721|gb|ABM71329.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 185
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ + +++KG SIFL+G + LA L Y + +L+E K+TI
Sbjct: 3 KSIIDKTNKIIKGRSIFLIGMMASGKSQTGPVLAKFLRYKYIDLDKLIEKIVKKTIIEMF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
+G + E + L+ + + ++V + GG G A+ + W L G +W+ + +
Sbjct: 63 HEDGEEKFRELETNCLKE-TIKIPSLVISTGG--GVIAKPENWGILRQGIIIWIDTKQEI 119
Query: 294 G 294
Sbjct: 120 A 120
>gi|302830073|ref|XP_002946603.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
gi|300268349|gb|EFJ52530.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
Length = 352
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 125 SFITLIETNQLFDKIKPTETI-WYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQL 183
S + L+ QL D P W D D L +K+ EL +
Sbjct: 62 SRLVLVRAEQLDDGRTPGHPYPWEEDFDLLSDKVKEVTDEL----------------TKD 105
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVV 242
L+G +I+L+G V L+ L Y T ++E K+ + EG +
Sbjct: 106 LRGCNIWLIGMMGSGKSTVGKMLSNTLKYAFFDTDSVIELAHDKKPVSQIFAEEGQEYFR 165
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
N E +++ LS + V+AT G GA R + W +++ G WL+
Sbjct: 166 NCESQIIKELSPYRNLVIATGG---GAVLRPENWGYMHLGIVCWLN 208
>gi|425467327|ref|ZP_18846610.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
gi|389829918|emb|CCI28391.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
Length = 190
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|425452721|ref|ZP_18832536.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
gi|389765347|emb|CCI08717.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
Length = 190
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|425438084|ref|ZP_18818493.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
gi|389676823|emb|CCH94217.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
Length = 190
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|440755112|ref|ZP_20934314.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
gi|440175318|gb|ELP54687.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
Length = 190
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|348686287|gb|EGZ26102.1| hypothetical protein PHYSODRAFT_285146 [Phytophthora sojae]
Length = 162
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 79 SQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDK 138
+ Y ++DG + + L L + QS +D +D T LTV++ L+ +L+D+
Sbjct: 71 TNYAWADGKKRVSVYLTLPGIGAQSEEDTHIDWTATSLTVKIKNYEGKTRLLSVPKLYDE 130
Query: 139 IKPTETIWYIDEDQLVINLKKQDPELKW 166
I +T EDQLV+ L K E W
Sbjct: 131 ISDVKT--KRKEDQLVLQLVKAK-EFSW 155
>gi|443653401|ref|ZP_21131078.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
gi|159030194|emb|CAO91086.1| aroK [Microcystis aeruginosa PCC 7806]
gi|443334040|gb|ELS48570.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
Length = 190
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPINWSYLRHGLMIWLD 111
>gi|425459812|ref|ZP_18839298.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
gi|389827663|emb|CCI20915.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
Length = 190
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|297797940|ref|XP_002866854.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312690|gb|EFH43113.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 299
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V +A LGYT L+E T + + +SV
Sbjct: 95 LNGRSMYLVGMMGSGKTTVGKIMARALGYTFFDCDTLIEQAMNGTSVAEIFEHFGESVFR 154
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L+ LS VV + GG GA R W++++ G ++WL
Sbjct: 155 EKETEALKKLSLMYNQVVVSTGG--GAVIRPINWKYMHKGISIWL 197
>gi|425442960|ref|ZP_18823194.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
gi|389715849|emb|CCH99842.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
Length = 190
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|425455716|ref|ZP_18835429.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
gi|389803372|emb|CCI17712.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
Length = 190
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPINWSYLRHGLMIWLD 111
>gi|390440354|ref|ZP_10228690.1| Shikimate kinase [Microcystis sp. T1-4]
gi|389836236|emb|CCI32816.1| Shikimate kinase [Microcystis sp. T1-4]
Length = 190
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIERVAGKKIRQIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLD 111
>gi|33860667|ref|NP_892228.1| shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633609|emb|CAE18566.1| Shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 185
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ + ++++G SI+L+G K LA L Y + +L+E AK+TI+
Sbjct: 3 KSIIEKTNKIIQGRSIYLIGMMASGKSKTGPVLAELLRYKYIDLDKLIENIAKKTINEMF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
+G + E + L+ + + +++ + GG G ++ + W L G +W+
Sbjct: 63 QEDGEKAFRELETNCLKE-TIKIPSLIVSTGG--GIISKPENWGVLRQGIIIWID 114
>gi|425444946|ref|ZP_18824986.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
gi|389735150|emb|CCI01281.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
Length = 190
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEGTFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPINWSYLRHGLMIWLD 111
>gi|363807180|ref|NP_001242093.1| uncharacterized protein LOC100807736 [Glycine max]
gi|255642221|gb|ACU21375.1| unknown [Glycine max]
Length = 253
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET-FAKQTIDSWMLAEGSDSVV 242
L G I+LVG V ++ LGY+ + L+E ++ G
Sbjct: 96 LNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVVDIFEQHGETFFR 155
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMGKLLRVFV 301
N E +VL LS R V++T GG A R W++++ G +VWL EA+ + R+
Sbjct: 156 NKETEVLHKLSLLHRLVISTGGG---AVMRPINWKYMHKGVSVWLDVPVEALAQ--RIAA 210
Query: 302 LSLHLRSVTSYFVRLEFVSSFSR 324
+ + R + +Y + +F R
Sbjct: 211 VGTNSRPLLNYEAGDPYTRAFMR 233
>gi|422302513|ref|ZP_16389875.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
gi|389788246|emb|CCI16208.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
Length = 190
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLVELSSLTKTVIATGGGM---VLKPINWSYLRHGLMIWLD 111
>gi|317968056|ref|ZP_07969446.1| shikimate kinase [Synechococcus sp. CB0205]
Length = 207
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L+G +++LVG V LA L Y L LE A ++I +EG
Sbjct: 10 QRLEGLNLYLVGMMGSGKSSVGRHLAEALDYRFLDADTSLEQVAGRSIPEIFASEGETGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
E VL ++S VVAT G G + W L+ G +WL +A+
Sbjct: 70 RALESAVLNQIASWHSLVVATGG---GVVTQPANWGELHQGVVIWLDAPDAI 118
>gi|116073893|ref|ZP_01471155.1| shikimate kinase [Synechococcus sp. RS9916]
gi|116069198|gb|EAU74950.1| shikimate kinase [Synechococcus sp. RS9916]
Length = 201
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +++LVG LA LGY + ++E A + I +G D
Sbjct: 16 LGGRNLYLVGMMGSGKSSSGRPLAQQLGYGFVDADPVIEQVAGRPIPQIFSEDGEDGFRA 75
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL+++ VVAT G G + + W L+ G +WL+
Sbjct: 76 IEAQVLQAIGQRHSLVVATGG---GVVTKPENWGVLHQGIVIWLN 117
>gi|222623677|gb|EEE57809.1| hypothetical protein OsJ_08387 [Oryza sativa Japonica Group]
Length = 464
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 94 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 153
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 154 DNESSVLRDLSSMKRLVVATGG---GAVIRPVNWKYMKKGLSVWL 195
>gi|357138119|ref|XP_003570645.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 305
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V LA LGY+ + +L+E + + S++
Sbjct: 95 LNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDKLVEQSVGMPSVAQIFKVHSEAFFR 154
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 155 DNETSVLRDLSSMRRLVVATGG---GAVIRPVNWKNMKKGLSVWL 196
>gi|125541140|gb|EAY87535.1| hypothetical protein OsI_08943 [Oryza sativa Indica Group]
Length = 401
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 94 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 153
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 154 DNESSVLRDLSSMKRLVVATGG---GAVIRPVNWKYMKKGLSVWL 195
>gi|302773918|ref|XP_002970376.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
gi|300161892|gb|EFJ28506.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
Length = 237
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GT +FLVG VA +++ L Y + +L+E T+ +
Sbjct: 43 LSGTCLFLVGMMGCGKSTVAKDISEALSYEFQDSDKLVEKAVGATVAKIFSDSSEEKFRA 102
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMGKLLRVFVL 302
E + L LS VVAT G GA R + W++L G T++L EA+ + RV
Sbjct: 103 AESEALNQLSETSNVVVATGG---GAVVRDENWRYLKQGITIYLDVPVEALAQ--RVVAA 157
Query: 303 SLHLR 307
L R
Sbjct: 158 GLEKR 162
>gi|334187330|ref|NP_001190969.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661685|gb|AEE87085.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 308
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
DE+Q + LKK+ E+K L SM LL + +G V +A
Sbjct: 78 FDEEQQI--LKKKAEEVK--------PYLNGRSMYLLNSFLVNALGMMGSGKTTVGKIMA 127
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN-GECDVLESLSSHVRAVVATLGGQ 266
LGYT L+E K T + + +SV E + L+ LS VV + GG
Sbjct: 128 RSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG- 186
Query: 267 QGAAARADKWQHLYAGFTVWL 287
GA R W++++ G ++WL
Sbjct: 187 -GAVIRPINWKYMHKGISIWL 206
>gi|414585207|tpg|DAA35778.1| TPA: shikimate kinase [Zea mays]
Length = 292
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
T + Y +D L++ K QD + L G ++LVG
Sbjct: 70 TGKVHYSADDALILQQKAQD------------------VLPYLDGRCVYLVGMMGSGKTT 111
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V L+ LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 112 VGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVV 171
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G TVWL
Sbjct: 172 ATGGG---AVIRPINWSYMKKGLTVWL 195
>gi|242077364|ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
gi|241939801|gb|EES12946.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
Length = 300
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
T + Y ++ L++ K QD + L G ++LVG
Sbjct: 78 TGKVHYSTDEALILQQKAQD------------------VLPYLDGRCVYLVGMMGSGKTT 119
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V LA LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 120 VGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVV 179
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G TVWL
Sbjct: 180 ATGGG---AVIRPINWSYMKKGLTVWL 203
>gi|212275149|ref|NP_001130232.1| hypothetical protein [Zea mays]
gi|194688616|gb|ACF78392.1| unknown [Zea mays]
gi|223973151|gb|ACN30763.1| unknown [Zea mays]
gi|414585206|tpg|DAA35777.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 293
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
T + Y +D L++ K QD + L G ++LVG
Sbjct: 71 TGKVHYSADDALILQQKAQD------------------VLPYLDGRCVYLVGMMGSGKTT 112
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V L+ LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 113 VGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVV 172
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G TVWL
Sbjct: 173 ATGGG---AVIRPINWSYMKKGLTVWL 196
>gi|195638244|gb|ACG38590.1| shikimate kinase [Zea mays]
Length = 293
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
T + Y +D L++ K QD + L G ++LVG
Sbjct: 71 TGKVHYSADDALILQQKAQD------------------VLPYLDGRCVYLVGMMGSGKTT 112
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V L+ LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 113 VGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVV 172
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G TVWL
Sbjct: 173 ATGGG---AVIRPINWSYMKKGLTVWL 196
>gi|449461431|ref|XP_004148445.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449503057|ref|XP_004161818.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 302
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G I+LVG V L+ LGY+ + L+E ++ G D
Sbjct: 104 LNGRCIYLVGMMGSGKTTVGKVLSNALGYSFSDSDSLVEQDMGISVAEVFKVYGEDFFRE 163
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L LS + V++T G GA R+ W++++ G +VWL
Sbjct: 164 RETEALRKLSLMRQFVISTGG---GAVTRSINWKYMHKGISVWL 204
>gi|224035559|gb|ACN36855.1| unknown [Zea mays]
Length = 247
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 33 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 92
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 93 DNESSVLRDLSSMRRLVVATGG---GAVIRPINWRYMKRGLSVWL 134
>gi|388514859|gb|AFK45491.1| unknown [Lotus japonicus]
Length = 299
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V L+ L Y+ + L+E + +D +A+ G
Sbjct: 103 LNGRCIYLVGMMGSGKTTVGKILSEVLSYSFFDSDALIE----EEVDKTSVADIFKNYGE 158
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMGKLL 297
N E ++L+ LS R V++T GG A + W++++ G +VWL EA+ +
Sbjct: 159 AFFRNKETEILKKLSMMRRDVISTGGG---AVVKPTNWKYMHKGISVWLDVPVEALAR-- 213
Query: 298 RVFVLSLHLRSVTSYFVRLEFVSSFSR 324
R+ + + R + Y + +F R
Sbjct: 214 RITKVGTNSRPLLHYEAGDAYTKTFMR 240
>gi|427718276|ref|YP_007066270.1| shikimate kinase [Calothrix sp. PCC 7507]
gi|427350712|gb|AFY33436.1| shikimate kinase [Calothrix sp. PCC 7507]
Length = 176
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G + LA L Y + T ++ A ++I+ G +
Sbjct: 4 LLKGVNLYLIGMMGTGKTTIGRLLAQQLSYGFVDTDSIVVQAAGKSINQIFAELGEAAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL + ++ + +AT G G + + W +L+ G VWL
Sbjct: 64 QLESDVLAQVCAYTKLTIATGG---GIILQRENWGYLHHGLIVWL 105
>gi|226505012|ref|NP_001152400.1| shikimate kinase [Zea mays]
gi|195655879|gb|ACG47407.1| shikimate kinase [Zea mays]
Length = 307
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 93 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 152
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 153 DNESSVLRDLSSMRRLVVATGG---GAVIRPINWRYMKKGLSVWL 194
>gi|316995679|emb|CBY85385.1| shikimate kinase [Cucumis sativus]
Length = 302
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G I+LVG V L+ LGY+ + L+E ++ G D
Sbjct: 104 LNGRCIYLVGMMGSGKTTVGKVLSNALGYSFSDSDSLVEQDMGISVAEVFKVYGEDFFRE 163
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L LS + V++T G GA R+ W++++ G +VWL
Sbjct: 164 RETEALGKLSLMRQFVISTGG---GAVTRSINWKYMHKGISVWL 204
>gi|88807136|ref|ZP_01122648.1| shikimate kinase [Synechococcus sp. WH 7805]
gi|88788350|gb|EAR19505.1| shikimate kinase [Synechococcus sp. WH 7805]
Length = 191
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G +++LVG LA L Y + ++E A TI +G
Sbjct: 10 QRLGGRNLYLVGMMGSGKTSTGRPLAQRLQYGFVDADAVIEQAAGCTIPEIFKRDGESGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
+ E VL ++S VVAT G GA R + W ++ G +WL
Sbjct: 70 RSLETQVLSAISQRHSLVVATGG---GAVTRPENWGAMHQGIVIWLD 113
>gi|87301781|ref|ZP_01084615.1| shikimate kinase [Synechococcus sp. WH 5701]
gi|87283349|gb|EAQ75304.1| shikimate kinase [Synechococcus sp. WH 5701]
Length = 220
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Query: 175 SLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWML 234
S+T G L+G +I+LVG V LA LGY + +LE A +I
Sbjct: 10 SVTPGLPGSLEGLNIYLVGMMGAGKSSVGRPLAQALGYRFIDADSVLEQHAGCSIPELFE 69
Query: 235 AEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVW 286
G E VL ++ VVAT G G +R W + G VW
Sbjct: 70 QRGEAGFRELESAVLNRIACWHSLVVATGG---GVVSRPCNWGQMRQGLVVW 118
>gi|226495257|ref|NP_001149678.1| shikimate kinase [Zea mays]
gi|194700058|gb|ACF84113.1| unknown [Zea mays]
gi|194700758|gb|ACF84463.1| unknown [Zea mays]
gi|195629356|gb|ACG36319.1| shikimate kinase [Zea mays]
gi|413924549|gb|AFW64481.1| Shikimate kinase [Zea mays]
Length = 303
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 89 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 148
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 149 DNESSVLRDLSSMRRLVVATGG---GAVIRPVNWKYMKKGLSVWL 190
>gi|255583009|ref|XP_002532273.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223528033|gb|EEF30113.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 313
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V L+ LGY+ L+E Q +D +AE G
Sbjct: 104 LSGRCIYLVGMMGSGKTTVGKVLSQVLGYSFCDCDSLIE----QDVDGTSVAEIFKLYGE 159
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL++LS + VV+T GG A R W+++ G +VWL
Sbjct: 160 GFFRMKETEVLKNLSMMHQIVVSTGGG---AVIRPINWEYMQKGISVWL 205
>gi|414585204|tpg|DAA35775.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 216
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G ++LVG V L+ LGY+ + +L+E + + + S++
Sbjct: 18 LDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFR 77
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LSS R VVAT GG A R W ++ G TVWL
Sbjct: 78 DNESEVLTDLSSMHRLVVATGGG---AVIRPINWSYMKKGLTVWL 119
>gi|413938896|gb|AFW73447.1| shikimate kinase [Zea mays]
Length = 305
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 91 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 150
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 151 DNESSVLRDLSSMRRLVVATGG---GAVIRPINWRYMKRGLSVWL 192
>gi|75107690|sp|Q5NTH4.1|SK1_ORYSJ RecName: Full=Shikimate kinase 1, chloroplastic; Short=OsSK1;
Flags: Precursor
gi|56805577|dbj|BAD83412.1| shikimate kinase 1 [Oryza sativa Japonica Group]
Length = 308
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 94 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 153
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 154 DNESSVLRDLSSMKRLVVATGG---GAVIRPVNWKYMKKGLSVWL 195
>gi|413938895|gb|AFW73446.1| hypothetical protein ZEAMMB73_578634 [Zea mays]
Length = 257
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 91 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 150
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 151 DNESSVLRDLSSMRRLVVATGG---GAVIRPINWRYMKRGLSVWL 192
>gi|356525535|ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 295
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 7/143 (4%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET-FAKQTIDSWMLAEGSDSVV 242
L G I+LVG V ++ LGY+ + L+E ++ G
Sbjct: 95 LNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVADIFKQHGETFFR 154
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMGKLLRVFV 301
N E +VL LS + V++T GG A R W++++ G +VWL EA+ + R+
Sbjct: 155 NKETEVLHKLSLMHQLVISTGGG---AVTRPINWKYMHKGVSVWLDVPVEALAQ--RIAA 209
Query: 302 LSLHLRSVTSYFVRLEFVSSFSR 324
+ + R + Y + +F R
Sbjct: 210 VGTNSRPLLHYEAGDPYTRAFMR 232
>gi|260435091|ref|ZP_05789061.1| shikimate kinase [Synechococcus sp. WH 8109]
gi|260412965|gb|EEX06261.1| shikimate kinase [Synechococcus sp. WH 8109]
Length = 191
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G SI+LVG LA LGY + ++E A +I +G +
Sbjct: 12 LAGRSIYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQAAGCSIPEIFDRDGEAGFRS 71
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL ++S VVAT G G + + W L++G +WL
Sbjct: 72 LESQVLSAISQRHSLVVATGG---GVVTQPENWGMLHSGIVIWL 112
>gi|357166256|ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 298
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
TE + Y ++ L++ K +D + L ++LVG
Sbjct: 76 TEKVHYSADEALILKQKAED------------------VLPCLNDRCVYLVGMMGSGKTT 117
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V +A LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 118 VGKIIAEVLGYSFFDSDKLVEQAVGISSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLVV 177
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT G GA R W ++ G T+WL
Sbjct: 178 ATGG---GAVIRPINWSYMRKGLTIWL 201
>gi|224096310|ref|XP_002310602.1| shikimate kinase [Populus trichocarpa]
gi|222853505|gb|EEE91052.1| shikimate kinase [Populus trichocarpa]
Length = 294
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V L+ + Y+ +L+E Q + +AE G
Sbjct: 104 LNGRCIYLVGMMGSGKTTVGKILSRSIRYSFCDCDKLVE----QDVGVPSVAEIFEIYGE 159
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
D + E + LE LS R VV+T GG A R + W ++ G +VWL
Sbjct: 160 DFFRDKETEALEKLSIEHRFVVSTGGG---AVIRDENWIYMRKGISVWL 205
>gi|254430567|ref|ZP_05044270.1| shikimate kinase [Cyanobium sp. PCC 7001]
gi|197625020|gb|EDY37579.1| shikimate kinase [Cyanobium sp. PCC 7001]
Length = 191
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 206 LAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265
LA LGY + +LE A + I +G E VLE +SS VVAT G
Sbjct: 5 LADALGYRFVDADTVLEQAAGRGIAEIFAEDGEAGFRELETAVLEQISSWHSLVVATGG- 63
Query: 266 QQGAAARADKWQHLYAGFTVWL 287
G R W HL+ G VWL
Sbjct: 64 --GVVTRPRNWGHLHQGVVVWL 83
>gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
Length = 302
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V L+ L Y + L+E Q +D+ +AE G
Sbjct: 103 LSGRCIYLVGMMGSGKTTVGKVLSQVLSYAFFDSDTLVE----QDVDANSVAEIFNLYGE 158
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LS R VV+T GG A R W+++ G +VWL
Sbjct: 159 GFFRDKETEVLRKLSLMHRLVVSTGGG---AVVRPINWKYMQKGISVWL 204
>gi|301112194|ref|XP_002905176.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095506|gb|EEY53558.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 163
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 79 SQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDK 138
+ Y ++DG + + L+L + + +D +D T LTV++ L+ ++L+D+
Sbjct: 72 TNYAWADGKKRVSMYLKLPGIGAYNEEDTHIDWTATSLTVKIKNYEGKTRLLVMSKLYDE 131
Query: 139 IKPTETIWYIDEDQLVINLKKQDPELKW 166
I +T EDQLV+ L K E W
Sbjct: 132 ISDIKTK--RKEDQLVLQLVKA-KEFSW 156
>gi|78213853|ref|YP_382632.1| shikimate kinase [Synechococcus sp. CC9605]
gi|124053406|sp|Q3AH55.1|AROK_SYNSC RecName: Full=Shikimate kinase; Short=SK
gi|78198312|gb|ABB36077.1| Shikimate kinase [Synechococcus sp. CC9605]
Length = 199
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG LA LGY + ++E A +I +G +
Sbjct: 20 LSGRSLYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQAAGCSIPEIFERDGDAGFRS 79
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL ++S VVAT G G + + W L++G +WL
Sbjct: 80 LESQVLSAISQRHSLVVATGG---GVVTQPENWGLLHSGIVIWL 120
>gi|326530582|dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
TE + Y ++ LV+ K +D + L ++LVG
Sbjct: 79 TEKVHYSADEALVLKQKAED------------------VLPYLNDRCVYLVGMMGSGKTT 120
Query: 202 VALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVV 260
V +A LGY+ + +L+E + ++ + E +VL LSS R +V
Sbjct: 121 VGKIIAEVLGYSFFDSDKLVEQSVGIPSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLIV 180
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G T+WL
Sbjct: 181 ATGGG---AVIRPINWSYMRKGLTIWL 204
>gi|352096131|ref|ZP_08957078.1| Shikimate kinase [Synechococcus sp. WH 8016]
gi|351677487|gb|EHA60636.1| Shikimate kinase [Synechococcus sp. WH 8016]
Length = 204
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +++L+G LA LGY + ++E A + I EG
Sbjct: 16 LGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVVEALAGRPIPQIFETEGEPGFRA 75
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL+++ VVAT G G + + W L+ G +WL+
Sbjct: 76 LESQVLQAIGERHSLVVATGG---GVITQPENWGVLHQGIVIWLA 117
>gi|113955447|ref|YP_731746.1| shikimate kinase [Synechococcus sp. CC9311]
gi|113882798|gb|ABI47756.1| shikimate kinase [Synechococcus sp. CC9311]
Length = 212
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +++L+G LA LGY + ++E A + I +G
Sbjct: 24 LGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVVEALAGRPIPQIFETDGEQGFRT 83
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL+++ VVAT G G + + W L+ G +WL+
Sbjct: 84 LESQVLQAIGQRHSLVVATGG---GVITQPENWGVLHQGIVIWLA 125
>gi|159902664|ref|YP_001550008.1| shikimate kinase [Prochlorococcus marinus str. MIT 9211]
gi|254806781|sp|A9BCW6.1|AROK_PROM4 RecName: Full=Shikimate kinase; Short=SK
gi|159887840|gb|ABX08054.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9211]
Length = 197
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +++LVG + LA L Y + +++E Q+I EG
Sbjct: 14 LGGRNLYLVGMMGSGKSRTGPVLAKKLSYGFVDVDDVIEKVTNQSISEIFDQEGEIGFRE 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E +L+ + VVAT G G R + W L+ G +W+
Sbjct: 74 IETQILQEIGQRHSLVVATGG---GIVTRPENWGILHQGVVIWID 115
>gi|302836259|ref|XP_002949690.1| hypothetical protein VOLCADRAFT_104463 [Volvox carteri f.
nagariensis]
gi|300265049|gb|EFJ49242.1| hypothetical protein VOLCADRAFT_104463 [Volvox carteri f.
nagariensis]
Length = 340
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQT-IDSWMLAEGSDSVV 242
LK S+ +GD +N VA + LG+ + +++ K T +D + E + S
Sbjct: 102 LKRISLTFLGDDHALNFAVAKIVGSRLGWFAVDIPKIICGMRKVTSLDQLSVEERAAS-- 159
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
E +VL L + R + L G GA AR WQ L+ VW+ + + +
Sbjct: 160 --EMEVLRGLRTQFRVIATPLPG--GAIAREAAWQDLWGSVIVWIDEEDKL 206
>gi|423089795|ref|ZP_17078144.1| putative cell wall binding repeat 2 [Clostridium difficile
70-100-2010]
gi|357557696|gb|EHJ39227.1| putative cell wall binding repeat 2 [Clostridium difficile
70-100-2010]
Length = 634
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W LTA +++L+ G I +VG S V ++ +LA
Sbjct: 481 ELKAPIIVNGWNDLTADAIKLMDGKEIGIVGGSNNVPSQIENQLA 525
>gi|400290133|ref|ZP_10792160.1| carbamoyl phosphate synthase large subunit [Streptococcus ratti FA-1
= DSM 20564]
gi|399920924|gb|EJN93741.1| carbamoyl phosphate synthase large subunit [Streptococcus ratti FA-1
= DSM 20564]
Length = 1059
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Query: 186 GTSIFLVGDSTEVNEKVALELA---VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
G IF + D T+ + AL+LA +GY+ L+TK E FAK +D+ ++ D +
Sbjct: 936 GNVIFTIADDTK---EEALDLARRFSNIGYSILATKGTAEFFAKHNLDTQLV----DKLG 988
Query: 243 NGECDVLESL--SSHVRAVVATLGGQQ-----GAAARADKWQHLYAGFTVWLSQTEAMGK 295
+ + + + + V+A+V T+G ++ GAA R+ +H FT L AM +
Sbjct: 989 ENDANDIPAFVRAGKVQAIVNTVGNKRTFDEDGAAIRSSAIEHGVPLFTA-LDTAAAMVR 1047
Query: 296 LL 297
+L
Sbjct: 1048 VL 1049
>gi|434387800|ref|YP_007098411.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
gi|428018790|gb|AFY94884.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
Length = 202
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLST---------KELLETFAKQTI-DSWM 233
L+G +I+L+G VA LA LGY L T K L F + +S +
Sbjct: 4 LQGLNIYLIGMMGCGKSTVAPLLADRLGYNFLDTDITLAKSCAKPLGYDFEDTDLSESEL 63
Query: 234 LAE---------GSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFT 284
+A+ G E VL +S++ R VVAT GG A + W HL+ G
Sbjct: 64 IAKIIRELFQTVGEPEFRAIETQVLAEVSAYTRLVVATGGG---IAIERENWNHLHQGLV 120
Query: 285 VWLS 288
+WL
Sbjct: 121 IWLD 124
>gi|423081111|ref|ZP_17069723.1| putative cell wall binding repeat 2 [Clostridium difficile
002-P50-2011]
gi|423085017|ref|ZP_17073475.1| putative cell wall binding repeat 2 [Clostridium difficile
050-P50-2011]
gi|357550872|gb|EHJ32677.1| putative cell wall binding repeat 2 [Clostridium difficile
050-P50-2011]
gi|357551420|gb|EHJ33210.1| putative cell wall binding repeat 2 [Clostridium difficile
002-P50-2011]
Length = 623
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|254976385|ref|ZP_05272857.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-66c26]
gi|255315522|ref|ZP_05357105.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-76w55]
gi|255518185|ref|ZP_05385861.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-97b34]
gi|260684366|ref|YP_003215651.1| S-layer protein [Clostridium difficile CD196]
gi|260688025|ref|YP_003219159.1| S-layer protein [Clostridium difficile R20291]
gi|306521135|ref|ZP_07407482.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-32g58]
gi|384362009|ref|YP_006199861.1| S-layer protein [Clostridium difficile BI1]
gi|260210529|emb|CBA65047.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile CD196]
gi|260214042|emb|CBE06195.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile R20291]
Length = 623
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|255101961|ref|ZP_05330938.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-63q42]
gi|255307829|ref|ZP_05352000.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile ATCC 43255]
Length = 623
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|126700407|ref|YP_001089304.1| cell wall binding protein [Clostridium difficile 630]
gi|115251844|emb|CAJ69679.1| Cell wall binding protein [Clostridium difficile 630]
Length = 623
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|255656776|ref|ZP_05402185.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-23m63]
Length = 623
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|255093771|ref|ZP_05323249.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile CIP 107932]
gi|255651301|ref|ZP_05398203.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-37x79]
Length = 614
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 461 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 505
>gi|297603441|ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group]
gi|75140480|sp|Q7X7H9.2|SK3_ORYSJ RecName: Full=Shikimate kinase 3, chloroplastic; Short=OsSK3;
Flags: Precursor
gi|38344899|emb|CAE02970.2| OSJNBb0079B02.2 [Oryza sativa Japonica Group]
gi|56805581|dbj|BAD83414.1| shikimate kinase 3 [Oryza sativa Japonica Group]
gi|116310881|emb|CAH67822.1| OSIGBa0138H21-OSIGBa0138E01.13 [Oryza sativa Indica Group]
gi|222629650|gb|EEE61782.1| hypothetical protein OsJ_16353 [Oryza sativa Japonica Group]
gi|255675822|dbj|BAF15951.2| Os04g0640600 [Oryza sativa Japonica Group]
Length = 287
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L I+LVG V LA LGY+ + +L+E + + + S++
Sbjct: 89 LNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFR 148
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LSS R VVAT G GA R W ++ G T+WL
Sbjct: 149 DNESEVLRDLSSMHRLVVATGG---GAVIRPINWSYMKKGSTIWL 190
>gi|434383184|ref|YP_006704967.1| shikimate kinase [Brachyspira pilosicoli WesB]
gi|404431833|emb|CCG57879.1| shikimate kinase [Brachyspira pilosicoli WesB]
Length = 174
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M LK T IF++G ++ LA + YT +++E+ K+TI+ G +
Sbjct: 2 MNDLKNT-IFVIGLPGSGKSDLSKLLAEYINYTFFDMDKVIESREKKTINKIFEDRGEEY 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGG 265
E DVLE LS+ AVV+T GG
Sbjct: 61 FREVESDVLEELSNIKNAVVSTGGG 85
>gi|148241390|ref|YP_001226547.1| shikimate kinase [Synechococcus sp. RCC307]
gi|254806784|sp|A5GQN5.1|AROK_SYNR3 RecName: Full=Shikimate kinase; Short=SK
gi|147849700|emb|CAK27194.1| Shikimate kinase [Synechococcus sp. RCC307]
Length = 195
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+GT+++LVG V LA LGY L ++ A +I +G +
Sbjct: 14 LQGTNLYLVGMMGSGKSTVGPLLAKALGYRFLDADAVISQAAGCSIPEIFERDGEEGFRQ 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTE 291
E VL+ LS VVAT GG A W L G +WL E
Sbjct: 74 LERQVLQQLSQWHSLVVATGGGIVTVPA---NWGELRQGVVIWLDVAE 118
>gi|428226691|ref|YP_007110788.1| shikimate kinase [Geitlerinema sp. PCC 7407]
gi|427986592|gb|AFY67736.1| shikimate kinase [Geitlerinema sp. PCC 7407]
Length = 194
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+LKG +++L+G V LA LGY T L+E Q++ + AE +++
Sbjct: 6 ILKGVNLYLIGMMGAGKSTVGRLLASRLGYHFFDTDALIEQATGQSVRQ-IFAESGEAIF 64
Query: 243 NG-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL L + +++T G G W +L G VWL
Sbjct: 65 RQLESQVLAQLCAQKNLLISTGG---GIVTTPFNWSYLRHGVVVWL 107
>gi|384246912|gb|EIE20400.1| SKI-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 235
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
++L A M+LL+GTS++LVG V LA L Y L L+E A ++
Sbjct: 26 KALAAEVMELLEGTSLYLVGMMGSGKSTVGKILASALKYPYLDCDTLIEKMAGCSVAEIF 85
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
EG +S E VL L VV+T G W ++ G +WL+
Sbjct: 86 SEEGEESFRELESQVLHELMPFKAVVVST---GGGVVVSKQNWGYMQHGVVIWLT 137
>gi|357124743|ref|XP_003564057.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 302
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V LA LGY+ + L+E + + S++
Sbjct: 99 LNGRCIYLVGMMGSGKSTVGKILAEVLGYSYFDSDSLVEQAVGMPSVAQIFKVHSEAFFR 158
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G ++ L
Sbjct: 159 DNESSVLRDLSSMQRLVVATGG---GAVIRPVNWRYMKKGLSIML 200
>gi|33866734|ref|NP_898293.1| shikimate kinase [Synechococcus sp. WH 8102]
gi|81573829|sp|Q7U469.1|AROK_SYNPX RecName: Full=Shikimate kinase; Short=SK
gi|33639335|emb|CAE08717.1| Shikimate kinase [Synechococcus sp. WH 8102]
Length = 191
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G S++LVG LA LGY + ++E A +I +G
Sbjct: 10 QRLGGRSLYLVGMMGSGKTSTGRPLAEQLGYGFVDADAVIEQAAGCSIPEIFERDGEAGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL ++ VVAT G G + + W L++G VWL
Sbjct: 70 RALESQVLNAIGQRHSLVVATGG---GVVTQQENWGLLHSGIVVWL 112
>gi|30688547|ref|NP_189325.2| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510473|ref|NP_001118711.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510475|ref|NP_001118712.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|75274423|sp|Q9LW20.1|SKL1_ARATH RecName: Full=Probable inactive shikimate kinase like 1,
chloroplastic; Short=AtSKL1; Flags: Precursor
gi|9279680|dbj|BAB01237.1| unnamed protein product [Arabidopsis thaliana]
gi|45752658|gb|AAS76227.1| At3g26900 [Arabidopsis thaliana]
gi|46402442|gb|AAS92323.1| At3g26900 [Arabidopsis thaliana]
gi|227202866|dbj|BAH56906.1| AT3G26900 [Arabidopsis thaliana]
gi|332643714|gb|AEE77235.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643715|gb|AEE77236.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643716|gb|AEE77237.1| shikimate kinase like 1 [Arabidopsis thaliana]
Length = 280
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG SIFLVG + + LA L Y + L+ A + + L E +
Sbjct: 87 LKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQ 146
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL+ LSS R VV GA L G ++W+
Sbjct: 147 ESETEVLKQLSSMGRLVVC---AGDGAVQSLRNLALLRHGISIWI 188
>gi|91079410|ref|XP_967066.1| PREDICTED: similar to NudC domain containing 1 [Tribolium
castaneum]
gi|270003473|gb|EEZ99920.1| hypothetical protein TcasGA2_TC002712 [Tribolium castaneum]
Length = 566
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 132 TNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVE 171
T +L+ +I P T W I+ LV+ L+K + L WP+IVE
Sbjct: 311 TGKLYHQIDPDVTCWTIESSTLVLTLQKCESGLMWPEIVE 350
>gi|297818234|ref|XP_002877000.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322838|gb|EFH53259.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG SIFLVG + + LA L Y + L+ A + + L E +
Sbjct: 87 LKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQ 146
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL+ LSS R VV GA L G ++W+
Sbjct: 147 ESETEVLKQLSSMGRLVVC---AGDGAVQSLTNLALLRHGISIWI 188
>gi|220908896|ref|YP_002484207.1| shikimate kinase [Cyanothece sp. PCC 7425]
gi|219865507|gb|ACL45846.1| Shikimate kinase [Cyanothece sp. PCC 7425]
Length = 169
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 206 LAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265
LA LGY T L+E A ++ G E VL LS + V+AT G
Sbjct: 13 LAQSLGYRYFDTDTLIEQLAGCSVREIFARWGEPQFRQWETQVLAELSPYKNLVIATGG- 71
Query: 266 QQGAAARADKWQHLYAGFTVWLS 288
G W +L+ G VWL+
Sbjct: 72 --GIVLNPINWSYLHHGLVVWLN 92
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.129 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,904,586,853
Number of Sequences: 23463169
Number of extensions: 187390101
Number of successful extensions: 535256
Number of sequences better than 100.0: 245
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 534982
Number of HSP's gapped (non-prelim): 249
length of query: 345
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 202
effective length of database: 9,003,962,200
effective search space: 1818800364400
effective search space used: 1818800364400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)