Query 019172
Match_columns 345
No_of_seqs 201 out of 1467
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 12:00:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nwj_A ATSK2; P loop, shikimat 99.9 6.2E-22 2.1E-26 184.5 11.7 120 175-298 37-158 (250)
2 3trf_A Shikimate kinase, SK; a 99.9 9.5E-22 3.3E-26 169.2 11.2 109 186-298 5-114 (185)
3 3vaa_A Shikimate kinase, SK; s 99.9 1.2E-21 4.1E-26 172.5 11.6 110 185-298 24-134 (199)
4 1zuh_A Shikimate kinase; alpha 99.8 1.3E-19 4.5E-24 154.2 10.8 105 186-298 7-113 (168)
5 2iyv_A Shikimate kinase, SK; t 99.8 3.3E-19 1.1E-23 153.5 11.6 105 187-294 3-107 (184)
6 1via_A Shikimate kinase; struc 99.8 7.3E-19 2.5E-23 150.8 12.3 101 187-294 5-106 (175)
7 2pt5_A Shikimate kinase, SK; a 99.8 2.4E-18 8.1E-23 145.5 11.7 105 187-294 1-106 (168)
8 1e6c_A Shikimate kinase; phosp 99.8 3.5E-18 1.2E-22 144.8 11.4 107 187-298 3-110 (173)
9 1kag_A SKI, shikimate kinase I 99.7 8E-18 2.7E-22 142.9 10.4 106 186-294 4-110 (173)
10 1knq_A Gluconate kinase; ALFA/ 99.5 7.1E-14 2.4E-18 119.2 12.8 139 184-332 6-166 (175)
11 1qhx_A CPT, protein (chloramph 99.5 6.7E-14 2.3E-18 119.1 10.7 112 185-298 2-129 (178)
12 3lw7_A Adenylate kinase relate 99.5 1.2E-13 4.1E-18 114.7 8.9 142 187-338 2-175 (179)
13 3fdi_A Uncharacterized protein 99.4 1.6E-13 5.4E-18 122.9 7.7 102 184-294 4-130 (201)
14 1zak_A Adenylate kinase; ATP:A 99.4 9.1E-13 3.1E-17 117.1 10.7 106 185-298 4-125 (222)
15 3cm0_A Adenylate kinase; ATP-b 99.4 4.7E-13 1.6E-17 114.6 8.2 102 185-294 3-119 (186)
16 2grj_A Dephospho-COA kinase; T 99.4 5.7E-13 2E-17 119.1 8.7 148 183-340 9-187 (192)
17 1zd8_A GTP:AMP phosphotransfer 99.4 6.1E-13 2.1E-17 118.8 8.7 109 185-298 6-124 (227)
18 3be4_A Adenylate kinase; malar 99.4 8.3E-13 2.8E-17 117.6 9.2 109 185-300 4-130 (217)
19 4eun_A Thermoresistant glucoki 99.4 5.3E-12 1.8E-16 110.8 14.1 139 184-332 27-186 (200)
20 3t61_A Gluconokinase; PSI-biol 99.4 3.3E-12 1.1E-16 111.6 10.6 136 186-332 18-172 (202)
21 2c95_A Adenylate kinase 1; tra 99.3 3E-12 1E-16 109.9 10.0 104 185-294 8-126 (196)
22 1aky_A Adenylate kinase; ATP:A 99.3 2.3E-12 7.9E-17 114.3 8.7 107 185-299 3-129 (220)
23 1ly1_A Polynucleotide kinase; 99.3 5.2E-12 1.8E-16 106.6 9.2 106 187-298 3-122 (181)
24 1qf9_A UMP/CMP kinase, protein 99.3 4.3E-12 1.5E-16 108.0 8.7 106 186-298 6-127 (194)
25 2bwj_A Adenylate kinase 5; pho 99.3 6.1E-12 2.1E-16 108.3 9.6 106 186-298 12-132 (199)
26 1tev_A UMP-CMP kinase; ploop, 99.3 4.9E-12 1.7E-16 107.8 8.7 104 185-294 2-127 (196)
27 3a8t_A Adenylate isopentenyltr 99.3 1.7E-12 5.7E-17 126.7 5.9 81 185-265 39-139 (339)
28 2cdn_A Adenylate kinase; phosp 99.3 1.2E-11 4E-16 108.1 10.5 110 182-298 16-143 (201)
29 3hdt_A Putative kinase; struct 99.3 2E-12 6.7E-17 118.5 5.4 101 186-294 14-150 (223)
30 2rhm_A Putative kinase; P-loop 99.3 1.6E-11 5.6E-16 105.1 10.2 104 185-298 4-121 (193)
31 1kht_A Adenylate kinase; phosp 99.3 9E-12 3.1E-16 106.1 8.4 105 185-294 2-128 (192)
32 1y63_A LMAJ004144AAA protein; 99.3 4.4E-13 1.5E-17 116.5 0.1 42 183-224 7-49 (184)
33 3a4m_A L-seryl-tRNA(SEC) kinas 99.3 1.2E-11 4E-16 113.8 9.1 97 186-294 4-113 (260)
34 2vli_A Antibiotic resistance p 99.2 2.7E-12 9.4E-17 109.3 4.0 106 185-298 4-121 (183)
35 1ak2_A Adenylate kinase isoenz 99.2 2.4E-11 8.1E-16 109.3 10.2 109 185-300 15-141 (233)
36 2if2_A Dephospho-COA kinase; a 99.2 5.3E-12 1.8E-16 110.1 4.6 54 187-241 2-58 (204)
37 3dl0_A Adenylate kinase; phosp 99.2 8.6E-11 2.9E-15 103.4 11.1 121 187-315 1-140 (216)
38 1m7g_A Adenylylsulfate kinase; 99.2 4.6E-11 1.6E-15 105.6 9.4 141 183-332 22-195 (211)
39 2p5t_B PEZT; postsegregational 99.2 4.6E-11 1.6E-15 109.2 9.4 116 173-294 19-150 (253)
40 1e4v_A Adenylate kinase; trans 99.2 5E-11 1.7E-15 105.4 9.1 106 187-299 1-120 (214)
41 3iij_A Coilin-interacting nucl 99.2 2.6E-11 9E-16 103.9 7.0 94 184-294 9-110 (180)
42 3uie_A Adenylyl-sulfate kinase 99.2 2E-10 7E-15 100.7 12.7 106 184-298 23-139 (200)
43 3fb4_A Adenylate kinase; psych 99.2 5.8E-11 2E-15 104.3 9.3 120 187-314 1-139 (216)
44 2xb4_A Adenylate kinase; ATP-b 99.2 5.3E-11 1.8E-15 106.7 9.0 106 187-299 1-123 (223)
45 1uf9_A TT1252 protein; P-loop, 99.1 2.2E-11 7.6E-16 105.1 4.9 43 185-228 7-50 (203)
46 3kb2_A SPBC2 prophage-derived 99.1 3.7E-10 1.2E-14 94.6 10.8 95 187-298 2-111 (173)
47 2axn_A 6-phosphofructo-2-kinas 99.1 1.4E-10 4.7E-15 118.1 9.7 102 186-290 35-154 (520)
48 2pbr_A DTMP kinase, thymidylat 99.1 1.2E-10 4.2E-15 99.3 7.8 107 187-298 1-139 (195)
49 1jjv_A Dephospho-COA kinase; P 99.1 8.2E-11 2.8E-15 102.8 6.7 55 187-242 3-60 (206)
50 2v54_A DTMP kinase, thymidylat 99.1 3.1E-11 1.1E-15 104.4 3.8 51 185-235 3-55 (204)
51 2ze6_A Isopentenyl transferase 99.1 1.5E-10 5E-15 106.6 8.2 98 188-293 3-130 (253)
52 1x6v_B Bifunctional 3'-phospho 99.1 4.3E-10 1.5E-14 117.5 12.4 108 184-298 50-168 (630)
53 1vht_A Dephospho-COA kinase; s 99.1 1.7E-10 5.7E-15 102.0 7.9 53 186-239 4-59 (218)
54 1ukz_A Uridylate kinase; trans 99.1 8.2E-10 2.8E-14 96.0 12.0 104 185-294 14-134 (203)
55 1ltq_A Polynucleotide kinase; 99.1 3.8E-10 1.3E-14 104.1 9.9 106 187-299 3-123 (301)
56 2pez_A Bifunctional 3'-phospho 99.1 2.8E-10 9.7E-15 97.5 8.3 107 185-298 4-121 (179)
57 2h92_A Cytidylate kinase; ross 99.0 5.5E-12 1.9E-16 111.1 -3.5 39 185-223 2-40 (219)
58 3crm_A TRNA delta(2)-isopenten 99.0 1.2E-10 4E-15 112.9 5.3 78 187-265 6-103 (323)
59 1nks_A Adenylate kinase; therm 99.0 3.6E-10 1.2E-14 96.0 7.7 39 187-225 2-45 (194)
60 1uj2_A Uridine-cytidine kinase 99.0 1.6E-10 5.6E-15 105.1 4.2 38 185-222 21-68 (252)
61 1gvn_B Zeta; postsegregational 99.0 2.2E-09 7.4E-14 100.9 10.5 109 184-294 31-151 (287)
62 3tlx_A Adenylate kinase 2; str 99.0 2.8E-09 9.6E-14 97.1 10.5 112 185-303 28-157 (243)
63 3cr8_A Sulfate adenylyltranfer 99.0 8E-10 2.7E-14 113.7 7.6 110 184-298 367-485 (552)
64 4i1u_A Dephospho-COA kinase; s 98.9 4.8E-09 1.6E-13 95.9 11.1 147 186-340 9-202 (210)
65 3gmt_A Adenylate kinase; ssgci 98.9 3E-09 1E-13 98.6 9.8 122 185-314 7-143 (230)
66 1q3t_A Cytidylate kinase; nucl 98.9 2.9E-11 9.8E-16 109.0 -3.8 40 184-223 14-53 (236)
67 2f6r_A COA synthase, bifunctio 98.9 4E-09 1.4E-13 98.5 10.5 39 186-225 75-113 (281)
68 3zvl_A Bifunctional polynucleo 98.9 2E-09 6.9E-14 106.0 8.5 89 186-294 258-350 (416)
69 3sr0_A Adenylate kinase; phosp 98.9 5.1E-09 1.8E-13 94.5 9.6 112 187-305 1-127 (206)
70 2ga8_A Hypothetical 39.9 kDa p 98.9 7E-11 2.4E-15 116.2 -3.1 63 187-250 25-107 (359)
71 2yvu_A Probable adenylyl-sulfa 98.9 4.5E-09 1.6E-13 90.5 8.6 106 185-294 12-126 (186)
72 3qor_A Nuclear migration prote 98.9 3.5E-09 1.2E-13 88.8 7.5 93 75-171 13-106 (121)
73 1cke_A CK, MSSA, protein (cyti 98.8 5E-09 1.7E-13 92.2 7.9 39 186-224 5-43 (227)
74 1bif_A 6-phosphofructo-2-kinas 98.8 8.1E-09 2.8E-13 102.8 10.4 100 185-289 38-157 (469)
75 3umf_A Adenylate kinase; rossm 98.8 1.9E-08 6.4E-13 92.0 11.3 104 185-294 28-146 (217)
76 2plr_A DTMP kinase, probable t 98.8 1.6E-08 5.3E-13 87.3 10.2 32 185-216 3-36 (213)
77 2jaq_A Deoxyguanosine kinase; 98.8 5E-09 1.7E-13 89.9 6.7 30 187-216 1-30 (205)
78 1nn5_A Similar to deoxythymidy 98.8 2.3E-09 7.7E-14 93.2 4.5 36 185-220 8-43 (215)
79 2z0h_A DTMP kinase, thymidylat 98.8 3.8E-09 1.3E-13 90.5 5.6 32 188-219 2-36 (197)
80 3ake_A Cytidylate kinase; CMP 98.8 9.8E-09 3.3E-13 88.7 8.2 37 188-224 4-40 (208)
81 4e22_A Cytidylate kinase; P-lo 98.8 7.8E-09 2.7E-13 94.7 7.9 39 185-223 26-64 (252)
82 1wfi_A Nuclear distribution ge 98.8 1.2E-08 4.1E-13 86.2 7.8 92 76-171 5-97 (131)
83 1wgv_A KIAA1068 protein; CS do 98.7 2.5E-08 8.7E-13 83.5 8.5 92 76-170 17-109 (124)
84 2qt1_A Nicotinamide riboside k 98.7 1.9E-08 6.6E-13 88.0 7.2 38 185-222 20-58 (207)
85 1x5m_A Calcyclin-binding prote 98.7 8.2E-08 2.8E-12 80.7 10.8 96 77-172 19-114 (127)
86 2bbw_A Adenylate kinase 4, AK4 98.7 5.6E-08 1.9E-12 87.7 10.3 103 185-294 26-141 (246)
87 2rh0_A NUDC domain-containing 98.7 2.2E-08 7.5E-13 87.7 7.1 89 75-170 10-101 (157)
88 3d3q_A TRNA delta(2)-isopenten 98.7 1.5E-08 5E-13 98.9 6.7 99 187-292 8-126 (340)
89 2wwf_A Thymidilate kinase, put 98.7 1.2E-08 4E-13 88.7 5.2 35 185-219 9-43 (212)
90 2qor_A Guanylate kinase; phosp 98.7 6.8E-09 2.3E-13 91.2 3.6 26 185-210 11-36 (204)
91 2bdt_A BH3686; alpha-beta prot 98.7 2.5E-08 8.6E-13 85.9 7.0 105 187-294 3-115 (189)
92 1m8p_A Sulfate adenylyltransfe 98.6 5E-08 1.7E-12 100.6 8.6 106 185-294 395-509 (573)
93 2o30_A Nuclear movement protei 98.6 3.8E-08 1.3E-12 83.3 4.9 87 77-171 3-89 (131)
94 4eaq_A DTMP kinase, thymidylat 98.5 2.5E-07 8.7E-12 83.9 9.0 33 185-217 25-59 (229)
95 1g8f_A Sulfate adenylyltransfe 98.5 9.3E-08 3.2E-12 97.7 6.7 90 171-288 379-476 (511)
96 2gks_A Bifunctional SAT/APS ki 98.5 2.7E-07 9.4E-12 94.5 8.8 101 185-294 371-483 (546)
97 1zp6_A Hypothetical protein AT 98.3 2.7E-07 9.1E-12 79.0 3.9 40 184-223 7-48 (191)
98 3exa_A TRNA delta(2)-isopenten 98.3 1.4E-06 4.8E-11 84.6 8.6 80 185-264 2-100 (322)
99 3r20_A Cytidylate kinase; stru 98.3 8.1E-07 2.8E-11 82.1 5.7 40 185-224 8-47 (233)
100 2xcm_C SGT1-like protein, cyto 98.2 4.5E-06 1.5E-10 65.1 8.2 86 79-169 3-88 (92)
101 3v9p_A DTMP kinase, thymidylat 98.1 5.4E-06 1.8E-10 76.1 8.6 29 183-211 22-50 (227)
102 1rl1_A Suppressor of G2 allele 98.1 8.6E-06 2.9E-10 66.4 8.1 90 77-171 8-97 (114)
103 3foz_A TRNA delta(2)-isopenten 98.1 6.2E-06 2.1E-10 79.9 7.9 79 186-264 10-107 (316)
104 3eph_A TRNA isopentenyltransfe 98.0 5.7E-06 2E-10 82.6 6.9 78 187-264 3-99 (409)
105 1dek_A Deoxynucleoside monopho 98.0 4.3E-05 1.5E-09 70.8 12.0 35 187-221 2-36 (241)
106 4edh_A DTMP kinase, thymidylat 97.9 4.1E-05 1.4E-09 69.1 8.8 28 184-211 4-31 (213)
107 3tau_A Guanylate kinase, GMP k 97.8 1E-05 3.6E-10 71.4 4.2 27 185-211 7-33 (208)
108 4tmk_A Protein (thymidylate ki 97.8 8.3E-05 2.8E-09 67.3 9.4 27 185-211 2-28 (213)
109 3asz_A Uridine kinase; cytidin 97.8 1.3E-05 4.3E-10 69.8 3.3 38 185-222 5-44 (211)
110 1ejf_A Progesterone receptor P 97.7 3.5E-05 1.2E-09 64.4 5.8 84 80-169 5-89 (125)
111 1kgd_A CASK, peripheral plasma 97.7 1.2E-05 4.2E-10 69.2 2.8 28 184-211 3-30 (180)
112 3lv8_A DTMP kinase, thymidylat 97.7 9.1E-05 3.1E-09 68.2 8.5 31 182-212 23-53 (236)
113 3ney_A 55 kDa erythrocyte memb 97.7 0.0001 3.5E-09 66.4 8.3 32 180-211 13-44 (197)
114 1p5z_B DCK, deoxycytidine kina 97.6 6.7E-05 2.3E-09 68.2 6.4 32 185-216 23-55 (263)
115 1g41_A Heat shock protein HSLU 97.6 2.5E-05 8.6E-10 78.6 3.8 50 184-233 48-100 (444)
116 1a7j_A Phosphoribulokinase; tr 97.6 1.5E-05 5E-10 75.1 1.8 36 186-221 5-45 (290)
117 3ec2_A DNA replication protein 97.6 0.00014 4.7E-09 61.9 7.3 40 185-224 37-82 (180)
118 1lv7_A FTSH; alpha/beta domain 97.6 9.7E-05 3.3E-09 66.4 6.5 33 186-218 45-77 (257)
119 1wh0_A Ubiquitin carboxyl-term 97.5 0.00013 4.3E-09 62.4 5.9 89 77-170 18-119 (134)
120 4hlc_A DTMP kinase, thymidylat 97.5 0.00058 2E-08 61.1 10.4 29 188-216 4-34 (205)
121 3tqc_A Pantothenate kinase; bi 97.5 0.00013 4.4E-09 70.3 6.0 34 188-221 94-134 (321)
122 3hjn_A DTMP kinase, thymidylat 97.4 0.0011 3.7E-08 58.8 11.2 28 189-216 3-33 (197)
123 2j41_A Guanylate kinase; GMP, 97.4 8.3E-05 2.8E-09 63.8 3.8 27 184-210 4-30 (207)
124 2jeo_A Uridine-cytidine kinase 97.4 0.00012 4E-09 66.0 4.3 37 185-221 24-70 (245)
125 3a00_A Guanylate kinase, GMP k 97.3 8.3E-05 2.9E-09 64.2 2.9 25 187-211 2-26 (186)
126 3hws_A ATP-dependent CLP prote 97.3 0.00013 4.4E-09 69.4 4.5 35 185-219 50-84 (363)
127 2qz4_A Paraplegin; AAA+, SPG7, 97.3 0.00016 5.5E-09 64.3 4.6 34 185-218 38-71 (262)
128 3cf0_A Transitional endoplasmi 97.3 0.00023 8E-09 66.2 5.9 41 185-225 48-90 (301)
129 3t15_A Ribulose bisphosphate c 97.3 0.00015 5E-09 67.7 4.5 33 186-218 36-68 (293)
130 4b4t_J 26S protease regulatory 97.3 0.00067 2.3E-08 67.6 9.1 34 185-218 181-214 (405)
131 2cg9_X CO-chaperone protein SB 97.3 0.0002 6.8E-09 60.8 4.5 87 78-170 6-107 (134)
132 3bos_A Putative DNA replicatio 97.3 0.00058 2E-08 59.0 7.5 37 185-221 51-92 (242)
133 3c8u_A Fructokinase; YP_612366 97.3 0.00018 6.2E-09 63.1 4.3 37 185-221 21-62 (208)
134 1um8_A ATP-dependent CLP prote 97.3 0.00018 6E-09 68.7 4.4 35 185-219 71-105 (376)
135 1d2n_A N-ethylmaleimide-sensit 97.2 0.00059 2E-08 61.9 7.4 34 185-218 63-96 (272)
136 2vp4_A Deoxynucleoside kinase; 97.2 0.00025 8.4E-09 63.5 4.8 27 185-211 19-45 (230)
137 3tr0_A Guanylate kinase, GMP k 97.2 0.00022 7.5E-09 61.2 4.2 27 185-211 6-32 (205)
138 3b9p_A CG5977-PA, isoform A; A 97.2 0.00021 7.3E-09 65.2 4.4 34 185-218 53-86 (297)
139 3h4m_A Proteasome-activating n 97.2 0.00022 7.7E-09 64.6 4.4 34 184-217 49-82 (285)
140 1ofh_A ATP-dependent HSL prote 97.2 0.00027 9.1E-09 64.1 4.4 34 185-218 49-82 (310)
141 1jbk_A CLPB protein; beta barr 97.2 0.00032 1.1E-08 57.8 4.4 26 185-210 42-67 (195)
142 1sq5_A Pantothenate kinase; P- 97.1 0.00028 9.7E-09 66.3 4.0 36 185-220 79-121 (308)
143 4b4t_K 26S protease regulatory 97.1 0.00029 1E-08 70.4 4.2 34 185-218 205-238 (428)
144 2p65_A Hypothetical protein PF 97.1 0.00029 9.8E-09 58.4 3.5 34 185-218 42-85 (187)
145 2kjq_A DNAA-related protein; s 97.1 0.00051 1.7E-08 58.2 5.1 36 185-220 35-75 (149)
146 3n70_A Transport activator; si 97.1 0.00034 1.2E-08 58.2 3.7 31 185-215 23-56 (145)
147 1ixz_A ATP-dependent metallopr 97.1 0.00043 1.5E-08 62.0 4.5 33 186-218 49-81 (254)
148 3pfi_A Holliday junction ATP-d 97.1 0.00069 2.3E-08 63.0 6.0 35 185-219 54-88 (338)
149 4b4t_M 26S protease regulatory 97.0 0.00035 1.2E-08 70.1 4.2 34 185-218 214-247 (434)
150 2r62_A Cell division protease 97.0 0.00018 6.1E-09 64.8 1.9 33 186-218 44-76 (268)
151 4b4t_L 26S protease subunit RP 97.0 0.00036 1.2E-08 70.0 4.2 34 185-218 214-247 (437)
152 2x8a_A Nuclear valosin-contain 97.0 0.00041 1.4E-08 64.3 4.3 33 186-218 44-76 (274)
153 4gp7_A Metallophosphoesterase; 97.0 0.00059 2E-08 58.4 4.8 35 185-221 8-42 (171)
154 3eie_A Vacuolar protein sortin 97.0 0.00043 1.5E-08 64.9 4.2 33 186-218 51-83 (322)
155 2ocp_A DGK, deoxyguanosine kin 97.0 0.00047 1.6E-08 61.7 4.1 29 186-214 2-31 (241)
156 2ce7_A Cell division protein F 96.9 0.00094 3.2E-08 67.5 6.3 33 186-218 49-81 (476)
157 1rz3_A Hypothetical protein rb 96.9 0.00072 2.5E-08 59.0 4.5 37 185-221 21-62 (201)
158 1iy2_A ATP-dependent metallopr 96.9 0.0007 2.4E-08 61.8 4.5 33 186-218 73-105 (278)
159 2qp9_X Vacuolar protein sortin 96.9 0.00056 1.9E-08 65.5 4.0 33 186-218 84-116 (355)
160 3d8b_A Fidgetin-like protein 1 96.9 0.00066 2.3E-08 64.9 4.4 34 185-218 116-149 (357)
161 1gtv_A TMK, thymidylate kinase 96.9 0.00023 7.8E-09 61.5 1.0 25 187-211 1-25 (214)
162 3vfd_A Spastin; ATPase, microt 96.9 0.0007 2.4E-08 65.1 4.5 33 186-218 148-180 (389)
163 1ye8_A Protein THEP1, hypothet 96.8 0.00061 2.1E-08 59.5 3.6 28 187-214 1-28 (178)
164 4b4t_H 26S protease regulatory 96.8 0.00056 1.9E-08 69.4 3.6 34 185-218 242-275 (467)
165 4b4t_I 26S protease regulatory 96.8 0.0007 2.4E-08 68.2 4.2 33 186-218 216-248 (437)
166 1xwi_A SKD1 protein; VPS4B, AA 96.8 0.00078 2.7E-08 63.7 4.2 32 186-217 45-77 (322)
167 2qmh_A HPR kinase/phosphorylas 96.8 0.00075 2.6E-08 61.8 3.9 36 185-221 33-68 (205)
168 2c9o_A RUVB-like 1; hexameric 96.8 0.00084 2.9E-08 66.3 4.4 36 184-219 61-98 (456)
169 2w58_A DNAI, primosome compone 96.8 0.0013 4.6E-08 56.5 5.1 38 187-224 55-97 (202)
170 3co5_A Putative two-component 96.7 0.00044 1.5E-08 57.5 1.7 33 185-218 26-58 (143)
171 1lvg_A Guanylate kinase, GMP k 96.7 0.00083 2.8E-08 58.9 3.4 26 185-210 3-28 (198)
172 3syl_A Protein CBBX; photosynt 96.7 0.00071 2.4E-08 61.8 3.1 27 185-211 66-92 (309)
173 3lnc_A Guanylate kinase, GMP k 96.7 0.00092 3.1E-08 59.3 3.6 26 185-210 26-52 (231)
174 1znw_A Guanylate kinase, GMP k 96.7 0.0015 5.2E-08 57.1 4.9 28 184-211 18-45 (207)
175 3pvs_A Replication-associated 96.7 0.0036 1.2E-07 62.3 8.1 33 187-219 51-83 (447)
176 1sxj_A Activator 1 95 kDa subu 96.7 0.0012 4.1E-08 66.4 4.5 33 186-218 77-109 (516)
177 1in4_A RUVB, holliday junction 96.6 0.0014 4.7E-08 62.0 4.5 29 187-215 52-80 (334)
178 3cf2_A TER ATPase, transitiona 96.6 0.0033 1.1E-07 67.5 7.4 33 186-218 511-543 (806)
179 1hqc_A RUVB; extended AAA-ATPa 96.6 0.0013 4.4E-08 60.4 3.6 33 185-217 37-69 (324)
180 1l8q_A Chromosomal replication 96.5 0.0016 5.3E-08 60.6 4.2 36 186-221 37-77 (324)
181 2kmw_A Uncharacterized protein 96.5 0.0039 1.3E-07 54.0 6.2 84 78-169 4-88 (150)
182 2r44_A Uncharacterized protein 96.5 0.0012 4.1E-08 61.4 3.1 31 186-216 46-76 (331)
183 1njg_A DNA polymerase III subu 96.5 0.0025 8.5E-08 54.0 4.8 27 186-212 45-71 (250)
184 3uk6_A RUVB-like 2; hexameric 96.5 0.0019 6.5E-08 60.4 4.4 33 185-217 69-103 (368)
185 1z6g_A Guanylate kinase; struc 96.5 0.0016 5.6E-08 57.9 3.7 26 185-210 22-47 (218)
186 2zan_A Vacuolar protein sortin 96.5 0.0018 6.1E-08 64.0 4.3 33 185-217 166-199 (444)
187 4fcw_A Chaperone protein CLPB; 96.5 0.0019 6.5E-08 58.9 4.1 25 187-211 48-72 (311)
188 2chg_A Replication factor C sm 96.4 0.0019 6.4E-08 54.4 3.7 25 186-210 38-62 (226)
189 2v1u_A Cell division control p 96.4 0.0014 4.9E-08 60.7 3.1 34 185-218 43-85 (387)
190 3pxg_A Negative regulator of g 96.4 0.0022 7.4E-08 63.9 4.5 36 184-219 199-244 (468)
191 3m6a_A ATP-dependent protease 96.4 0.0021 7.2E-08 65.3 4.5 34 184-217 106-139 (543)
192 2qby_A CDC6 homolog 1, cell di 96.4 0.0021 7.2E-08 59.4 4.1 34 185-218 44-83 (386)
193 2qby_B CDC6 homolog 3, cell di 96.4 0.0023 7.9E-08 59.8 4.4 34 185-218 44-88 (384)
194 2z4s_A Chromosomal replication 96.4 0.012 4E-07 58.2 9.6 36 186-221 130-172 (440)
195 3cf2_A TER ATPase, transitiona 96.3 0.0019 6.4E-08 69.4 3.8 34 186-219 238-271 (806)
196 1s96_A Guanylate kinase, GMP k 96.3 0.0025 8.5E-08 57.5 3.9 27 185-211 15-41 (219)
197 1odf_A YGR205W, hypothetical 3 96.3 0.0024 8.1E-08 60.2 3.8 37 185-221 30-74 (290)
198 3ld9_A DTMP kinase, thymidylat 96.3 0.0022 7.4E-08 58.6 3.3 30 183-212 18-47 (223)
199 1htw_A HI0065; nucleotide-bind 96.2 0.0028 9.7E-08 54.5 3.8 27 184-210 31-57 (158)
200 3hu3_A Transitional endoplasmi 96.2 0.0029 1E-07 63.8 4.3 34 185-218 237-270 (489)
201 1ex7_A Guanylate kinase; subst 96.2 0.0032 1.1E-07 56.0 4.0 24 187-210 2-25 (186)
202 3u61_B DNA polymerase accessor 96.2 0.0042 1.4E-07 57.4 4.9 32 187-218 49-80 (324)
203 2dhr_A FTSH; AAA+ protein, hex 96.2 0.0033 1.1E-07 63.9 4.5 33 186-218 64-96 (499)
204 2bjv_A PSP operon transcriptio 96.2 0.0034 1.2E-07 56.5 4.0 33 185-217 28-63 (265)
205 2ehv_A Hypothetical protein PH 96.1 0.0032 1.1E-07 55.2 3.6 37 184-220 28-70 (251)
206 1ypw_A Transitional endoplasmi 96.1 0.0027 9.3E-08 67.7 3.7 34 185-218 237-270 (806)
207 3tmk_A Thymidylate kinase; pho 96.1 0.0039 1.3E-07 56.6 4.1 28 185-212 4-31 (216)
208 1fnn_A CDC6P, cell division co 96.1 0.0041 1.4E-07 57.9 4.3 31 188-218 46-80 (389)
209 3pxi_A Negative regulator of g 96.1 0.0038 1.3E-07 65.3 4.5 36 184-219 199-244 (758)
210 1svm_A Large T antigen; AAA+ f 96.0 0.0049 1.7E-07 60.5 4.7 35 183-217 166-200 (377)
211 3te6_A Regulatory protein SIR3 96.0 0.0047 1.6E-07 59.4 4.2 26 185-210 44-69 (318)
212 4a74_A DNA repair and recombin 96.0 0.004 1.4E-07 53.9 3.3 27 184-210 23-49 (231)
213 3aez_A Pantothenate kinase; tr 96.0 0.0041 1.4E-07 59.1 3.7 37 185-221 89-132 (312)
214 2w0m_A SSO2452; RECA, SSPF, un 95.9 0.0053 1.8E-07 52.8 4.0 37 183-219 20-61 (235)
215 2i3b_A HCR-ntpase, human cance 95.9 0.0046 1.6E-07 54.6 3.5 25 186-210 1-25 (189)
216 3tqf_A HPR(Ser) kinase; transf 95.8 0.0068 2.3E-07 54.5 4.4 37 184-221 14-50 (181)
217 1a5t_A Delta prime, HOLB; zinc 95.8 0.012 4.2E-07 55.4 6.4 44 171-214 9-52 (334)
218 3tif_A Uncharacterized ABC tra 95.8 0.0043 1.5E-07 56.3 3.1 27 185-211 30-56 (235)
219 2qgz_A Helicase loader, putati 95.8 0.0061 2.1E-07 57.5 4.0 40 186-225 152-197 (308)
220 2pcj_A ABC transporter, lipopr 95.7 0.0051 1.7E-07 55.4 3.1 27 185-211 29-55 (224)
221 3ch4_B Pmkase, phosphomevalona 95.7 0.0088 3E-07 54.3 4.6 38 186-223 11-51 (202)
222 2v9p_A Replication protein E1; 95.7 0.007 2.4E-07 57.8 3.9 29 182-210 122-150 (305)
223 1n0w_A DNA repair protein RAD5 95.6 0.0062 2.1E-07 53.2 3.3 37 183-219 21-68 (243)
224 1vma_A Cell division protein F 95.6 0.032 1.1E-06 53.0 8.4 35 186-220 104-143 (306)
225 2qen_A Walker-type ATPase; unk 95.6 0.0067 2.3E-07 55.4 3.5 34 186-219 31-64 (350)
226 1lw7_A Transcriptional regulat 95.6 0.0063 2.1E-07 58.1 3.3 29 186-214 170-198 (365)
227 1ypw_A Transitional endoplasmi 95.6 0.004 1.4E-07 66.4 2.0 34 185-218 510-543 (806)
228 2cbz_A Multidrug resistance-as 95.6 0.0064 2.2E-07 55.3 3.1 26 185-210 30-55 (237)
229 1r6b_X CLPA protein; AAA+, N-t 95.5 0.0075 2.6E-07 62.9 4.0 31 188-218 490-520 (758)
230 2orw_A Thymidine kinase; TMTK, 95.5 0.0093 3.2E-07 52.1 4.0 26 185-210 2-27 (184)
231 2d2e_A SUFC protein; ABC-ATPas 95.5 0.008 2.7E-07 55.0 3.7 25 185-209 28-52 (250)
232 1jr3_A DNA polymerase III subu 95.5 0.016 5.6E-07 53.7 5.8 28 186-213 38-65 (373)
233 1b0u_A Histidine permease; ABC 95.5 0.0067 2.3E-07 56.0 3.1 27 185-211 31-57 (262)
234 4g1u_C Hemin import ATP-bindin 95.5 0.0067 2.3E-07 56.3 3.1 26 185-210 36-61 (266)
235 1rj9_A FTSY, signal recognitio 95.5 0.0088 3E-07 56.7 3.9 26 185-210 101-126 (304)
236 1ji0_A ABC transporter; ATP bi 95.5 0.0072 2.5E-07 55.0 3.1 27 185-211 31-57 (240)
237 1g6h_A High-affinity branched- 95.5 0.0071 2.4E-07 55.5 3.1 27 185-211 32-58 (257)
238 2ff7_A Alpha-hemolysin translo 95.5 0.0071 2.4E-07 55.4 3.1 27 185-211 34-60 (247)
239 2pze_A Cystic fibrosis transme 95.4 0.0074 2.5E-07 54.5 3.1 27 185-211 33-59 (229)
240 2eyu_A Twitching motility prot 95.4 0.0091 3.1E-07 55.2 3.7 27 184-210 23-49 (261)
241 3e70_C DPA, signal recognition 95.4 0.027 9.3E-07 54.0 7.2 26 185-210 128-153 (328)
242 3b85_A Phosphate starvation-in 95.4 0.0076 2.6E-07 54.0 3.1 25 185-209 21-45 (208)
243 2cvh_A DNA repair and recombin 95.4 0.0099 3.4E-07 51.1 3.7 37 183-219 17-55 (220)
244 3gfo_A Cobalt import ATP-bindi 95.4 0.0075 2.6E-07 56.5 3.1 26 185-210 33-58 (275)
245 1mv5_A LMRA, multidrug resista 95.4 0.0072 2.5E-07 55.0 2.9 26 185-210 27-52 (243)
246 3b9q_A Chloroplast SRP recepto 95.4 0.0092 3.1E-07 56.5 3.7 26 185-210 99-124 (302)
247 2zu0_C Probable ATP-dependent 95.4 0.0094 3.2E-07 55.2 3.6 26 185-210 45-70 (267)
248 1g8p_A Magnesium-chelatase 38 95.4 0.0053 1.8E-07 56.7 2.0 26 186-211 45-70 (350)
249 2olj_A Amino acid ABC transpor 95.4 0.008 2.7E-07 55.9 3.1 27 185-211 49-75 (263)
250 1sxj_D Activator 1 41 kDa subu 95.4 0.0081 2.8E-07 55.4 3.1 25 187-211 59-83 (353)
251 1tue_A Replication protein E1; 95.3 0.014 4.7E-07 53.6 4.6 33 185-217 57-89 (212)
252 2ixe_A Antigen peptide transpo 95.3 0.0084 2.9E-07 55.7 3.1 27 185-211 44-70 (271)
253 2ghi_A Transport protein; mult 95.3 0.0085 2.9E-07 55.3 3.1 26 185-210 45-70 (260)
254 1sgw_A Putative ABC transporte 95.3 0.0079 2.7E-07 54.2 2.9 26 185-210 34-59 (214)
255 2chq_A Replication factor C sm 95.3 0.0067 2.3E-07 54.9 2.4 24 187-210 39-62 (319)
256 1sxj_E Activator 1 40 kDa subu 95.3 0.012 4E-07 54.7 4.1 24 187-210 37-60 (354)
257 2yhs_A FTSY, cell division pro 95.3 0.024 8.1E-07 58.0 6.5 35 185-219 292-331 (503)
258 1sxj_B Activator 1 37 kDa subu 95.3 0.013 4.4E-07 53.1 4.2 24 187-210 43-66 (323)
259 1sxj_C Activator 1 40 kDa subu 95.3 0.0093 3.2E-07 55.9 3.3 24 188-211 48-71 (340)
260 2hf9_A Probable hydrogenase ni 95.3 0.019 6.4E-07 49.7 5.0 34 185-218 37-74 (226)
261 1qvr_A CLPB protein; coiled co 95.3 0.0092 3.1E-07 63.5 3.6 34 185-218 190-233 (854)
262 2qi9_C Vitamin B12 import ATP- 95.2 0.0092 3.1E-07 54.9 3.1 26 185-210 25-50 (249)
263 2yz2_A Putative ABC transporte 95.2 0.0092 3.2E-07 55.1 3.1 26 185-210 32-57 (266)
264 2dr3_A UPF0273 protein PH0284; 95.2 0.016 5.5E-07 50.5 4.5 38 183-220 20-62 (247)
265 2ihy_A ABC transporter, ATP-bi 95.2 0.0092 3.1E-07 55.8 3.1 27 185-211 46-72 (279)
266 1vpl_A ABC transporter, ATP-bi 95.2 0.0096 3.3E-07 55.0 3.1 27 185-211 40-66 (256)
267 2f1r_A Molybdopterin-guanine d 95.1 0.0068 2.3E-07 52.8 1.8 25 187-211 3-27 (171)
268 1ojl_A Transcriptional regulat 95.1 0.012 4E-07 55.2 3.5 33 185-217 24-59 (304)
269 2px0_A Flagellar biosynthesis 95.1 0.014 4.8E-07 54.9 3.9 36 185-220 104-145 (296)
270 2nq2_C Hypothetical ABC transp 95.1 0.011 3.7E-07 54.4 3.1 26 185-210 30-55 (253)
271 1r6b_X CLPA protein; AAA+, N-t 95.1 0.017 5.7E-07 60.3 4.7 26 185-210 206-231 (758)
272 1cr0_A DNA primase/helicase; R 95.0 0.015 5.1E-07 53.3 3.9 29 182-210 31-59 (296)
273 3kta_A Chromosome segregation 95.0 0.018 6.2E-07 48.5 4.1 25 188-212 28-52 (182)
274 2onk_A Molybdate/tungstate ABC 95.0 0.013 4.5E-07 53.5 3.5 24 187-210 25-48 (240)
275 1xjc_A MOBB protein homolog; s 95.0 0.015 5.2E-07 51.0 3.7 24 187-210 5-28 (169)
276 2gza_A Type IV secretion syste 95.0 0.012 4E-07 56.7 3.2 27 185-211 174-200 (361)
277 2ce2_X GTPase HRAS; signaling 95.0 0.014 4.9E-07 46.6 3.2 24 186-209 3-26 (166)
278 2wsm_A Hydrogenase expression/ 95.0 0.018 6.2E-07 49.7 4.1 34 185-218 29-66 (221)
279 1iqp_A RFCS; clamp loader, ext 95.0 0.017 5.8E-07 52.4 4.0 26 186-211 46-71 (327)
280 1c9k_A COBU, adenosylcobinamid 94.9 0.014 4.8E-07 51.9 3.1 28 189-217 2-31 (180)
281 3nbx_X ATPase RAVA; AAA+ ATPas 94.8 0.012 4.2E-07 59.7 2.9 30 183-212 38-67 (500)
282 1nlf_A Regulatory protein REPA 94.8 0.019 6.6E-07 52.3 3.9 27 184-210 28-54 (279)
283 2og2_A Putative signal recogni 94.8 0.017 5.7E-07 56.4 3.6 26 185-210 156-181 (359)
284 3fvq_A Fe(3+) IONS import ATP- 94.8 0.017 5.8E-07 56.5 3.6 26 185-210 29-54 (359)
285 1kao_A RAP2A; GTP-binding prot 94.7 0.018 6E-07 46.2 3.2 25 185-209 2-26 (167)
286 2wjg_A FEOB, ferrous iron tran 94.7 0.016 5.5E-07 48.2 3.0 25 185-209 6-30 (188)
287 1ko7_A HPR kinase/phosphatase; 94.7 0.023 7.8E-07 54.7 4.4 36 185-221 143-178 (314)
288 2wji_A Ferrous iron transport 94.7 0.017 5.8E-07 47.8 3.0 23 186-208 3-25 (165)
289 2pjz_A Hypothetical protein ST 94.7 0.015 5.1E-07 54.0 3.0 25 186-210 30-54 (263)
290 1yrb_A ATP(GTP)binding protein 94.7 0.025 8.4E-07 50.3 4.2 35 185-219 13-51 (262)
291 2bbs_A Cystic fibrosis transme 94.7 0.016 5.5E-07 54.6 3.1 26 185-210 63-88 (290)
292 3k1j_A LON protease, ATP-depen 94.6 0.02 6.7E-07 58.7 3.9 29 185-213 59-87 (604)
293 3sop_A Neuronal-specific septi 94.6 0.019 6.7E-07 53.2 3.5 24 188-211 4-27 (270)
294 3pxi_A Negative regulator of g 94.6 0.021 7.2E-07 59.7 4.2 29 188-216 523-554 (758)
295 3nh6_A ATP-binding cassette SU 94.6 0.01 3.5E-07 56.6 1.6 27 185-211 79-105 (306)
296 1z47_A CYSA, putative ABC-tran 94.6 0.02 6.7E-07 55.8 3.7 26 185-210 40-65 (355)
297 1u8z_A RAS-related protein RAL 94.6 0.02 7E-07 45.9 3.2 25 185-209 3-27 (168)
298 3rlf_A Maltose/maltodextrin im 94.6 0.02 6.7E-07 56.5 3.6 27 185-211 28-54 (381)
299 3dm5_A SRP54, signal recogniti 94.6 0.073 2.5E-06 53.5 7.8 35 186-220 100-139 (443)
300 2fna_A Conserved hypothetical 94.6 0.044 1.5E-06 49.9 5.7 32 187-218 31-64 (357)
301 2yyz_A Sugar ABC transporter, 94.6 0.021 7E-07 55.7 3.7 26 185-210 28-53 (359)
302 3kjh_A CO dehydrogenase/acetyl 94.5 0.18 6E-06 43.8 9.3 33 187-219 1-38 (254)
303 2it1_A 362AA long hypothetical 94.5 0.021 7.1E-07 55.8 3.6 27 185-211 28-54 (362)
304 1oix_A RAS-related protein RAB 94.5 0.022 7.7E-07 48.5 3.4 24 187-210 30-53 (191)
305 2dyk_A GTP-binding protein; GT 94.5 0.023 7.9E-07 45.6 3.3 23 187-209 2-24 (161)
306 2f9l_A RAB11B, member RAS onco 94.5 0.024 8.1E-07 48.3 3.4 23 187-209 6-28 (199)
307 2gj8_A MNME, tRNA modification 94.4 0.023 7.9E-07 47.6 3.3 24 186-209 4-27 (172)
308 1v43_A Sugar-binding transport 94.4 0.022 7.6E-07 55.7 3.6 26 185-210 36-61 (372)
309 1g29_1 MALK, maltose transport 94.4 0.022 7.7E-07 55.6 3.7 26 185-210 28-53 (372)
310 2ewv_A Twitching motility prot 94.4 0.022 7.7E-07 55.2 3.6 27 185-211 135-161 (372)
311 1np6_A Molybdopterin-guanine d 94.4 0.026 8.9E-07 49.3 3.7 24 187-210 7-30 (174)
312 1c1y_A RAS-related protein RAP 94.4 0.024 8.2E-07 45.7 3.2 24 186-209 3-26 (167)
313 3tui_C Methionine import ATP-b 94.4 0.023 8E-07 55.7 3.6 27 185-211 53-79 (366)
314 2yv5_A YJEQ protein; hydrolase 94.3 0.031 1.1E-06 52.5 4.2 29 182-211 161-189 (302)
315 2pt7_A CAG-ALFA; ATPase, prote 94.3 0.018 6.2E-07 54.9 2.7 27 185-211 170-196 (330)
316 3d31_A Sulfate/molybdate ABC t 94.3 0.017 6E-07 55.9 2.5 26 185-210 25-50 (348)
317 1z2a_A RAS-related protein RAB 94.3 0.029 9.9E-07 45.3 3.5 24 186-209 5-28 (168)
318 2v3c_C SRP54, signal recogniti 94.3 0.018 6.1E-07 57.3 2.6 33 187-219 100-137 (432)
319 3gd7_A Fusion complex of cysti 94.2 0.026 9E-07 55.5 3.6 26 185-210 46-71 (390)
320 3p32_A Probable GTPase RV1496/ 94.2 0.029 9.8E-07 53.6 3.8 33 186-218 79-116 (355)
321 3bwd_D RAC-like GTP-binding pr 94.2 0.036 1.2E-06 45.6 3.9 26 184-209 6-31 (182)
322 2npi_A Protein CLP1; CLP1-PCF1 94.1 0.027 9.1E-07 56.5 3.6 36 183-218 135-176 (460)
323 1qvr_A CLPB protein; coiled co 94.1 0.031 1.1E-06 59.5 4.1 32 187-218 589-623 (854)
324 1pui_A ENGB, probable GTP-bind 94.1 0.017 5.7E-07 49.2 1.7 24 185-208 25-48 (210)
325 3vqt_A RF-3, peptide chain rel 94.0 0.079 2.7E-06 54.1 6.8 98 185-289 30-161 (548)
326 2ged_A SR-beta, signal recogni 94.0 0.039 1.3E-06 46.2 3.8 25 185-209 47-71 (193)
327 1j8m_F SRP54, signal recogniti 94.0 0.03 1E-06 52.7 3.5 33 186-218 98-135 (297)
328 2zej_A Dardarin, leucine-rich 94.0 0.027 9.1E-07 47.4 2.8 22 187-208 3-24 (184)
329 4dzz_A Plasmid partitioning pr 94.0 0.35 1.2E-05 40.9 9.8 88 188-290 3-107 (206)
330 1oxx_K GLCV, glucose, ABC tran 94.0 0.018 6.1E-07 55.9 1.8 26 185-210 30-55 (353)
331 3con_A GTPase NRAS; structural 93.9 0.027 9.2E-07 47.0 2.7 26 184-209 19-44 (190)
332 2vhj_A Ntpase P4, P4; non- hyd 93.9 0.031 1.1E-06 54.4 3.4 35 183-217 120-156 (331)
333 1ek0_A Protein (GTP-binding pr 93.9 0.038 1.3E-06 44.5 3.5 23 187-209 4-26 (170)
334 1xx6_A Thymidine kinase; NESG, 93.9 0.051 1.7E-06 48.2 4.5 26 185-210 7-32 (191)
335 1w5s_A Origin recognition comp 93.9 0.025 8.7E-07 53.1 2.7 26 185-210 49-76 (412)
336 1zu4_A FTSY; GTPase, signal re 93.9 0.036 1.2E-06 52.8 3.7 35 186-220 105-144 (320)
337 1pzn_A RAD51, DNA repair and r 93.9 0.038 1.3E-06 53.0 3.9 36 184-219 129-175 (349)
338 1p6x_A Thymidine kinase; P-loo 93.8 0.02 6.8E-07 55.5 1.9 29 185-213 6-34 (334)
339 2erx_A GTP-binding protein DI- 93.8 0.038 1.3E-06 44.6 3.3 23 186-208 3-25 (172)
340 2lkc_A Translation initiation 93.8 0.043 1.5E-06 44.9 3.7 24 185-208 7-30 (178)
341 3jvv_A Twitching mobility prot 93.8 0.036 1.2E-06 53.7 3.7 27 185-211 122-148 (356)
342 3f9v_A Minichromosome maintena 93.8 0.025 8.5E-07 58.3 2.6 29 188-216 329-357 (595)
343 4gzl_A RAS-related C3 botulinu 93.8 0.039 1.3E-06 47.4 3.5 24 185-208 29-52 (204)
344 2b8t_A Thymidine kinase; deoxy 93.8 0.041 1.4E-06 50.1 3.8 26 185-210 11-36 (223)
345 2nzj_A GTP-binding protein REM 93.8 0.039 1.3E-06 44.9 3.3 23 186-208 4-26 (175)
346 1u94_A RECA protein, recombina 93.7 0.07 2.4E-06 51.7 5.6 50 183-232 60-118 (356)
347 2a9k_A RAS-related protein RAL 93.7 0.037 1.3E-06 45.4 3.1 27 183-209 15-41 (187)
348 3q85_A GTP-binding protein REM 93.7 0.04 1.4E-06 44.7 3.3 22 187-208 3-24 (169)
349 1z0j_A RAB-22, RAS-related pro 93.7 0.043 1.5E-06 44.3 3.4 24 186-209 6-29 (170)
350 1z08_A RAS-related protein RAB 93.7 0.042 1.4E-06 44.5 3.4 23 187-209 7-29 (170)
351 1yqt_A RNAse L inhibitor; ATP- 93.7 0.036 1.2E-06 56.4 3.6 26 185-210 46-71 (538)
352 3q72_A GTP-binding protein RAD 93.7 0.038 1.3E-06 44.7 3.1 21 187-207 3-23 (166)
353 1nrj_B SR-beta, signal recogni 93.7 0.049 1.7E-06 46.7 3.9 26 185-210 11-36 (218)
354 1ky3_A GTP-binding protein YPT 93.7 0.044 1.5E-06 44.8 3.4 24 186-209 8-31 (182)
355 3clv_A RAB5 protein, putative; 93.6 0.044 1.5E-06 45.3 3.4 25 185-209 6-30 (208)
356 3t1o_A Gliding protein MGLA; G 93.6 0.044 1.5E-06 45.4 3.4 26 186-211 14-39 (198)
357 1upt_A ARL1, ADP-ribosylation 93.6 0.049 1.7E-06 44.2 3.6 25 185-209 6-30 (171)
358 2fn4_A P23, RAS-related protei 93.6 0.045 1.6E-06 44.6 3.4 25 185-209 8-32 (181)
359 1u0l_A Probable GTPase ENGC; p 93.6 0.036 1.2E-06 51.8 3.1 29 182-210 165-193 (301)
360 1m2o_B GTP-binding protein SAR 93.6 0.046 1.6E-06 46.4 3.5 24 185-208 22-45 (190)
361 1g16_A RAS-related protein SEC 93.6 0.047 1.6E-06 44.1 3.4 22 187-208 4-25 (170)
362 1wms_A RAB-9, RAB9, RAS-relate 93.5 0.047 1.6E-06 44.6 3.4 24 186-209 7-30 (177)
363 1r2q_A RAS-related protein RAB 93.5 0.049 1.7E-06 43.8 3.5 24 186-209 6-29 (170)
364 3end_A Light-independent proto 93.5 0.5 1.7E-05 43.3 10.7 34 185-218 40-78 (307)
365 2oap_1 GSPE-2, type II secreti 93.5 0.036 1.2E-06 56.3 3.2 27 185-211 259-285 (511)
366 3bc1_A RAS-related protein RAB 93.5 0.048 1.7E-06 44.9 3.5 24 186-209 11-34 (195)
367 1ls1_A Signal recognition part 93.5 0.046 1.6E-06 51.2 3.6 35 185-219 97-136 (295)
368 3b5x_A Lipid A export ATP-bind 93.4 0.04 1.4E-06 56.2 3.4 33 185-217 368-404 (582)
369 1z0f_A RAB14, member RAS oncog 93.4 0.051 1.8E-06 44.2 3.5 25 186-210 15-39 (179)
370 2iwr_A Centaurin gamma 1; ANK 93.4 0.03 1E-06 46.1 2.0 25 185-209 6-30 (178)
371 2qm8_A GTPase/ATPase; G protei 93.4 0.047 1.6E-06 52.1 3.7 26 185-210 54-79 (337)
372 2hxs_A RAB-26, RAS-related pro 93.4 0.051 1.7E-06 44.5 3.4 24 186-209 6-29 (178)
373 2j37_W Signal recognition part 93.4 0.14 4.9E-06 52.0 7.3 34 186-219 101-139 (504)
374 3b60_A Lipid A export ATP-bind 93.4 0.038 1.3E-06 56.3 3.1 27 185-211 368-394 (582)
375 1u0j_A DNA replication protein 93.4 0.059 2E-06 50.8 4.2 27 186-212 104-130 (267)
376 2y8e_A RAB-protein 6, GH09086P 93.4 0.037 1.3E-06 45.1 2.5 25 184-208 12-36 (179)
377 1r8s_A ADP-ribosylation factor 93.4 0.057 1.9E-06 43.6 3.6 22 188-209 2-23 (164)
378 3tw8_B RAS-related protein RAB 93.3 0.047 1.6E-06 44.5 3.1 21 187-207 10-30 (181)
379 4dsu_A GTPase KRAS, isoform 2B 93.3 0.054 1.8E-06 44.6 3.4 23 187-209 5-27 (189)
380 1nij_A Hypothetical protein YJ 93.3 0.044 1.5E-06 51.6 3.2 22 188-209 6-27 (318)
381 1mh1_A RAC1; GTP-binding, GTPa 93.3 0.04 1.4E-06 45.3 2.6 25 185-209 4-28 (186)
382 1svi_A GTP-binding protein YSX 93.3 0.058 2E-06 45.1 3.6 25 185-209 22-46 (195)
383 2xxa_A Signal recognition part 93.2 0.045 1.5E-06 54.5 3.3 34 186-219 100-139 (433)
384 2rcn_A Probable GTPase ENGC; Y 93.2 0.055 1.9E-06 52.8 3.8 29 183-211 212-240 (358)
385 3pqc_A Probable GTP-binding pr 93.2 0.056 1.9E-06 44.8 3.4 24 186-209 23-46 (195)
386 2cxx_A Probable GTP-binding pr 93.2 0.054 1.8E-06 44.8 3.2 23 187-209 2-24 (190)
387 2obl_A ESCN; ATPase, hydrolase 93.1 0.062 2.1E-06 51.8 4.0 31 182-212 67-97 (347)
388 1p9r_A General secretion pathw 93.1 0.056 1.9E-06 53.6 3.8 27 185-211 166-192 (418)
389 2zr9_A Protein RECA, recombina 93.1 0.07 2.4E-06 51.4 4.3 49 183-231 58-115 (349)
390 2bme_A RAB4A, RAS-related prot 93.1 0.061 2.1E-06 44.4 3.4 23 187-209 11-33 (186)
391 1m7b_A RND3/RHOE small GTP-bin 93.0 0.061 2.1E-06 44.9 3.4 24 186-209 7-30 (184)
392 2dpy_A FLII, flagellum-specifi 93.0 0.063 2.2E-06 53.4 4.0 31 181-211 152-182 (438)
393 3lxx_A GTPase IMAP family memb 93.0 0.056 1.9E-06 47.8 3.3 24 185-208 28-51 (239)
394 2g6b_A RAS-related protein RAB 93.0 0.065 2.2E-06 43.9 3.5 24 186-209 10-33 (180)
395 3kkq_A RAS-related protein M-R 93.0 0.065 2.2E-06 44.3 3.5 26 184-209 16-41 (183)
396 2oil_A CATX-8, RAS-related pro 92.9 0.065 2.2E-06 44.9 3.4 23 187-209 26-48 (193)
397 2efe_B Small GTP-binding prote 92.9 0.066 2.3E-06 43.9 3.4 24 186-209 12-35 (181)
398 3t5g_A GTP-binding protein RHE 92.9 0.044 1.5E-06 45.2 2.3 23 186-208 6-28 (181)
399 3oes_A GTPase rhebl1; small GT 92.9 0.058 2E-06 45.9 3.1 25 185-209 23-47 (201)
400 2gf0_A GTP-binding protein DI- 92.9 0.072 2.4E-06 44.5 3.6 24 185-208 7-30 (199)
401 2atv_A RERG, RAS-like estrogen 92.9 0.071 2.4E-06 45.0 3.6 25 185-209 27-51 (196)
402 1knx_A Probable HPR(Ser) kinas 92.9 0.063 2.1E-06 51.7 3.6 36 185-221 146-181 (312)
403 1osn_A Thymidine kinase, VZV-T 92.9 0.034 1.1E-06 54.1 1.8 33 181-213 7-40 (341)
404 1moz_A ARL1, ADP-ribosylation 92.9 0.046 1.6E-06 45.0 2.4 23 185-207 17-39 (183)
405 3kl4_A SRP54, signal recogniti 92.9 0.05 1.7E-06 54.4 3.1 35 186-220 97-136 (433)
406 3k53_A Ferrous iron transport 92.8 0.066 2.2E-06 48.6 3.4 25 185-209 2-26 (271)
407 2yl4_A ATP-binding cassette SU 92.7 0.044 1.5E-06 56.0 2.5 27 185-211 369-395 (595)
408 2bov_A RAla, RAS-related prote 92.7 0.072 2.5E-06 44.7 3.5 25 185-209 13-37 (206)
409 3ihw_A Centg3; RAS, centaurin, 92.7 0.063 2.1E-06 45.4 3.1 27 183-209 17-43 (184)
410 2fh5_B SR-beta, signal recogni 92.7 0.076 2.6E-06 45.3 3.6 25 185-209 6-30 (214)
411 1yqt_A RNAse L inhibitor; ATP- 92.7 0.066 2.2E-06 54.5 3.6 26 185-210 311-336 (538)
412 1vg8_A RAS-related protein RAB 92.6 0.075 2.6E-06 44.8 3.4 24 186-209 8-31 (207)
413 3tkl_A RAS-related protein RAB 92.6 0.077 2.6E-06 44.2 3.5 23 187-209 17-39 (196)
414 3qf4_B Uncharacterized ABC tra 92.6 0.046 1.6E-06 56.0 2.4 27 185-211 380-406 (598)
415 1fzq_A ADP-ribosylation factor 92.6 0.071 2.4E-06 44.8 3.2 25 185-209 15-39 (181)
416 1ksh_A ARF-like protein 2; sma 92.6 0.075 2.6E-06 44.1 3.3 25 185-209 17-41 (186)
417 3ozx_A RNAse L inhibitor; ATP 92.5 0.056 1.9E-06 55.2 2.9 26 185-210 24-49 (538)
418 2p67_A LAO/AO transport system 92.5 0.077 2.6E-06 50.4 3.7 26 185-210 55-80 (341)
419 3dz8_A RAS-related protein RAB 92.5 0.085 2.9E-06 44.3 3.6 25 186-210 23-47 (191)
420 3bk7_A ABC transporter ATP-bin 92.5 0.06 2.1E-06 55.8 3.1 26 185-210 116-141 (607)
421 1f6b_A SAR1; gtpases, N-termin 92.5 0.069 2.4E-06 45.7 3.0 25 184-208 23-47 (198)
422 1tf7_A KAIC; homohexamer, hexa 92.5 0.073 2.5E-06 53.4 3.6 36 184-219 37-78 (525)
423 2gf9_A RAS-related protein RAB 92.4 0.084 2.9E-06 44.2 3.5 23 187-209 23-45 (189)
424 1x3s_A RAS-related protein RAB 92.4 0.085 2.9E-06 43.8 3.5 25 185-209 14-38 (195)
425 3ozx_A RNAse L inhibitor; ATP 92.4 0.063 2.2E-06 54.8 3.1 26 185-210 293-318 (538)
426 3j16_B RLI1P; ribosome recycli 92.4 0.073 2.5E-06 55.2 3.6 26 185-210 102-127 (608)
427 1zcb_A G alpha I/13; GTP-bindi 92.4 0.072 2.5E-06 51.7 3.4 28 184-211 31-58 (362)
428 2fg5_A RAB-22B, RAS-related pr 92.4 0.084 2.9E-06 44.5 3.4 24 186-209 23-46 (192)
429 2p5s_A RAS and EF-hand domain 92.4 0.086 2.9E-06 44.7 3.5 25 185-209 27-51 (199)
430 1t9h_A YLOQ, probable GTPase E 92.3 0.031 1.1E-06 53.3 0.8 28 182-209 169-196 (307)
431 1z06_A RAS-related protein RAB 92.3 0.088 3E-06 44.1 3.4 25 185-209 19-43 (189)
432 1of1_A Thymidine kinase; trans 92.3 0.041 1.4E-06 54.3 1.5 28 184-211 47-74 (376)
433 1zbd_A Rabphilin-3A; G protein 92.3 0.084 2.9E-06 44.6 3.3 23 187-209 9-31 (203)
434 1zj6_A ADP-ribosylation factor 92.3 0.089 3E-06 43.9 3.4 24 185-208 15-38 (187)
435 3bk7_A ABC transporter ATP-bin 92.2 0.078 2.7E-06 54.9 3.6 26 185-210 381-406 (607)
436 2a5j_A RAS-related protein RAB 92.2 0.091 3.1E-06 44.1 3.4 24 186-209 21-44 (191)
437 3c5c_A RAS-like protein 12; GD 92.2 0.091 3.1E-06 44.3 3.4 25 185-209 20-44 (187)
438 2xtp_A GTPase IMAP family memb 92.2 0.085 2.9E-06 47.1 3.4 25 185-209 21-45 (260)
439 2bcg_Y Protein YP2, GTP-bindin 92.2 0.091 3.1E-06 44.6 3.4 23 187-209 9-31 (206)
440 3reg_A RHO-like small GTPase; 92.2 0.093 3.2E-06 44.1 3.5 25 185-209 22-46 (194)
441 2z43_A DNA repair and recombin 92.2 0.096 3.3E-06 49.2 3.9 37 183-219 104-151 (324)
442 1e2k_A Thymidine kinase; trans 92.2 0.037 1.3E-06 53.5 1.0 27 185-211 3-29 (331)
443 1zd9_A ADP-ribosylation factor 92.2 0.095 3.2E-06 44.0 3.5 24 186-209 22-45 (188)
444 4a82_A Cystic fibrosis transme 92.2 0.041 1.4E-06 56.1 1.4 27 185-211 366-392 (578)
445 2qnr_A Septin-2, protein NEDD5 92.1 0.075 2.6E-06 49.8 3.0 22 187-208 19-40 (301)
446 2www_A Methylmalonic aciduria 92.0 0.095 3.2E-06 50.2 3.7 25 186-210 74-98 (349)
447 2r8r_A Sensor protein; KDPD, P 92.0 0.14 4.8E-06 47.3 4.7 34 186-219 6-44 (228)
448 2h17_A ADP-ribosylation factor 92.0 0.085 2.9E-06 43.9 3.0 27 183-209 18-44 (181)
449 4ag6_A VIRB4 ATPase, type IV s 92.0 0.1 3.4E-06 50.0 3.8 26 185-210 34-59 (392)
450 2q3h_A RAS homolog gene family 92.0 0.097 3.3E-06 44.1 3.3 24 185-208 19-42 (201)
451 3qf4_A ABC transporter, ATP-bi 91.9 0.052 1.8E-06 55.6 1.8 27 185-211 368-394 (587)
452 2b6h_A ADP-ribosylation factor 91.9 0.096 3.3E-06 44.5 3.2 23 185-207 28-50 (192)
453 2ew1_A RAS-related protein RAB 91.9 0.1 3.5E-06 45.1 3.4 24 186-209 26-49 (201)
454 2qag_B Septin-6, protein NEDD5 91.9 0.084 2.9E-06 52.8 3.2 26 184-209 38-65 (427)
455 1gwn_A RHO-related GTP-binding 91.9 0.1 3.5E-06 45.2 3.4 24 186-209 28-51 (205)
456 3llu_A RAS-related GTP-binding 91.9 0.089 3.1E-06 44.6 3.0 24 185-208 19-42 (196)
457 2r2a_A Uncharacterized protein 91.9 0.11 3.9E-06 46.1 3.8 24 186-209 5-28 (199)
458 2il1_A RAB12; G-protein, GDP, 91.8 0.096 3.3E-06 44.3 3.1 23 186-208 26-48 (192)
459 4bas_A ADP-ribosylation factor 91.8 0.096 3.3E-06 43.7 3.1 25 184-208 15-39 (199)
460 3cmw_A Protein RECA, recombina 91.8 0.14 4.7E-06 59.2 5.3 62 185-246 1081-1154(1706)
461 1v5w_A DMC1, meiotic recombina 91.8 0.15 5.1E-06 48.5 4.8 37 183-219 119-166 (343)
462 2o52_A RAS-related protein RAB 91.8 0.1 3.5E-06 44.5 3.3 23 186-208 25-47 (200)
463 3cph_A RAS-related protein SEC 91.8 0.11 3.8E-06 43.9 3.5 25 185-209 19-43 (213)
464 2zts_A Putative uncharacterize 91.7 0.12 4E-06 44.9 3.6 26 183-208 27-52 (251)
465 2fv8_A H6, RHO-related GTP-bin 91.7 0.11 3.8E-06 44.4 3.4 24 186-209 25-48 (207)
466 2j0v_A RAC-like GTP-binding pr 91.7 0.095 3.2E-06 44.7 3.0 25 185-209 8-32 (212)
467 3cbq_A GTP-binding protein REM 91.7 0.084 2.9E-06 45.1 2.6 23 185-207 22-44 (195)
468 2atx_A Small GTP binding prote 91.6 0.12 4E-06 43.4 3.4 23 187-209 19-41 (194)
469 2f7s_A C25KG, RAS-related prot 91.6 0.11 3.7E-06 44.5 3.3 22 187-208 26-47 (217)
470 3j16_B RLI1P; ribosome recycli 91.6 0.1 3.5E-06 54.1 3.6 25 186-210 378-402 (608)
471 3hr8_A Protein RECA; alpha and 91.6 0.11 3.8E-06 50.5 3.7 49 183-231 58-115 (356)
472 3lda_A DNA repair protein RAD5 91.6 0.13 4.6E-06 50.5 4.3 35 185-219 177-222 (400)
473 3lxw_A GTPase IMAP family memb 91.6 0.11 3.6E-06 46.9 3.3 24 185-208 20-43 (247)
474 2gco_A H9, RHO-related GTP-bin 91.6 0.12 4.1E-06 44.0 3.4 24 186-209 25-48 (201)
475 2fu5_C RAS-related protein RAB 91.5 0.067 2.3E-06 44.2 1.8 22 187-208 9-30 (183)
476 2h57_A ADP-ribosylation factor 91.5 0.091 3.1E-06 44.0 2.6 26 185-210 20-45 (190)
477 2i1q_A DNA repair and recombin 91.5 0.11 3.9E-06 48.2 3.5 27 183-209 95-121 (322)
478 3bfv_A CAPA1, CAPB2, membrane 91.4 0.31 1.1E-05 44.8 6.4 52 167-218 60-120 (271)
479 2hup_A RAS-related protein RAB 91.3 0.13 4.4E-06 44.0 3.4 24 186-209 29-52 (201)
480 1tf7_A KAIC; homohexamer, hexa 91.3 0.13 4.4E-06 51.7 3.9 28 183-210 278-305 (525)
481 3q3j_B RHO-related GTP-binding 91.2 0.13 4.6E-06 44.5 3.5 26 184-209 25-50 (214)
482 2ffh_A Protein (FFH); SRP54, s 91.2 0.12 4.2E-06 51.4 3.7 35 185-219 97-136 (425)
483 2j1l_A RHO-related GTP-binding 91.2 0.12 4.2E-06 44.5 3.3 24 185-208 33-56 (214)
484 2qu8_A Putative nucleolar GTP- 91.2 0.12 4.2E-06 45.0 3.2 23 186-208 29-51 (228)
485 1f2t_A RAD50 ABC-ATPase; DNA d 91.2 0.13 4.3E-06 43.3 3.1 23 188-210 25-47 (149)
486 2cjw_A GTP-binding protein GEM 91.2 0.13 4.5E-06 43.8 3.3 23 187-209 7-29 (192)
487 2x77_A ADP-ribosylation factor 91.1 0.096 3.3E-06 43.7 2.4 23 185-207 21-43 (189)
488 3cio_A ETK, tyrosine-protein k 91.1 0.26 8.7E-06 46.1 5.5 52 168-219 83-143 (299)
489 3ea0_A ATPase, para family; al 91.1 0.22 7.6E-06 43.4 4.8 35 186-220 4-45 (245)
490 1tq4_A IIGP1, interferon-induc 91.1 0.1 3.5E-06 51.7 2.9 25 185-209 68-92 (413)
491 2j9r_A Thymidine kinase; TK1, 90.9 0.15 5.3E-06 46.5 3.7 26 185-210 27-52 (214)
492 3euj_A Chromosome partition pr 90.9 0.14 4.8E-06 51.9 3.7 25 187-211 30-54 (483)
493 3e1s_A Exodeoxyribonuclease V, 90.9 0.16 5.6E-06 52.0 4.3 29 182-210 200-228 (574)
494 2a5y_B CED-4; apoptosis; HET: 90.7 0.16 5.4E-06 51.0 3.9 23 186-208 152-174 (549)
495 2iw3_A Elongation factor 3A; a 90.7 0.14 4.7E-06 56.3 3.7 24 185-208 460-483 (986)
496 3cpj_B GTP-binding protein YPT 90.7 0.16 5.5E-06 44.0 3.4 23 187-209 14-36 (223)
497 3upu_A ATP-dependent DNA helic 90.6 0.15 5.2E-06 50.1 3.6 24 187-210 46-69 (459)
498 2qag_C Septin-7; cell cycle, c 90.4 0.12 4.2E-06 51.2 2.8 24 187-210 32-55 (418)
499 2fz4_A DNA repair protein RAD2 90.4 0.32 1.1E-05 43.6 5.2 30 183-212 105-134 (237)
500 1z6t_A APAF-1, apoptotic prote 90.3 0.15 5.3E-06 50.7 3.4 23 186-208 147-169 (591)
No 1
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=99.86 E-value=6.2e-22 Score=184.50 Aligned_cols=120 Identities=26% Similarity=0.349 Sum_probs=108.1
Q ss_pred HHHHhhhhhcCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH-cCchhhhhhccChHHHHHHHHHHHHHHh
Q 019172 175 SLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA-KQTIDSWMLAEGSDSVVNGECDVLESLS 253 (345)
Q Consensus 175 ~l~a~~~~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~-g~sI~ei~~~~Gee~FRelE~~vL~~L~ 253 (345)
.+.-.+.+.+.+..|+|+|++||||||+|+.||+.||++|+|+|+++++.. |+++.++++..|++.||++|.++++++.
T Consensus 37 ~~~~~i~~~l~g~~i~l~G~~GsGKSTl~~~La~~lg~~~~d~d~~~~~~~~g~~i~~i~~~~ge~~fr~~e~~~l~~l~ 116 (250)
T 3nwj_A 37 KKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLS 116 (250)
T ss_dssp HHHHTTHHHHTTCCEEEECSTTSCHHHHHHHHHHHHTCEEEEHHHHHHHHSTTSCHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcCCCEEEEECCCCCCHHHHHHHHHHhcCCcEEeCcHHHHHHhcCccHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 334445556678999999999999999999999999999999999999999 9999999999999999999999999988
Q ss_pred cC-CCEEEEcCCCCCcccCcHHHHHHHhcCcEEEEEcChhhhchhh
Q 019172 254 SH-VRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 254 ~~-~~~VIAtGGG~~~avlr~~~r~~L~~G~VV~Ld~s~a~~~~~R 298 (345)
.. .+.||+|||| +++++++|+.|+.|.+|||+++.++. ..|
T Consensus 117 ~~~~~~Via~GgG---~v~~~~~~~~l~~~~vV~L~a~~e~l-~~R 158 (250)
T 3nwj_A 117 LMYHQVVVSTGGG---AVIRPINWKYMHKGISIWLDVPLEAL-AHR 158 (250)
T ss_dssp HHCSSEEEECCGG---GGGSHHHHHHHTTSEEEEEECCHHHH-HHH
T ss_pred hhcCCcEEecCCC---eecCHHHHHHHhCCcEEEEECCHHHH-HHH
Confidence 76 6899999998 59999999999999999999999876 455
No 2
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=99.86 E-value=9.5e-22 Score=169.18 Aligned_cols=109 Identities=21% Similarity=0.231 Sum_probs=101.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEcCCC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAtGGG 265 (345)
+++|+|+|++||||||+|+.||+.||++|+|+|+++++..|+++.+++...|+.+|+++|.+++.++....+.||++|||
T Consensus 5 ~~~i~l~G~~GsGKst~a~~La~~l~~~~i~~d~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~vi~~gg~ 84 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKLDNIILATGGG 84 (185)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEECCTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhCCCEEEChHHHHHHcCCChhhHHHHhCHHHHHHHHHHHHHHHHhcCCcEEecCCc
Confidence 56899999999999999999999999999999999999999999999999999999999999999998778899999998
Q ss_pred CCcccCcHHHHHHHh-cCcEEEEEcChhhhchhh
Q 019172 266 QQGAAARADKWQHLY-AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 266 ~~~avlr~~~r~~L~-~G~VV~Ld~s~a~~~~~R 298 (345)
+++.+++++.|+ .|.+|||++|.++. ..|
T Consensus 85 ---~~~~~~~~~~l~~~~~vi~L~~~~e~l-~~R 114 (185)
T 3trf_A 85 ---VVLDEKNRQQISETGVVIYLTASIDTQ-LKR 114 (185)
T ss_dssp ---GGGSHHHHHHHHHHEEEEEEECCHHHH-HHH
T ss_pred ---eecCHHHHHHHHhCCcEEEEECCHHHH-HHH
Confidence 589999999997 68999999998865 555
No 3
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=1.2e-21 Score=172.47 Aligned_cols=110 Identities=20% Similarity=0.221 Sum_probs=101.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLG 264 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAtGG 264 (345)
.++.|+|+|++||||||+|+.||+.||++++|+|+++++..|+++.+++...|+.+|+++|.++++.+....++||++||
T Consensus 24 ~~~~i~l~G~~GsGKsTl~~~La~~l~~~~i~~d~~~~~~~g~~i~~~~~~~~~~~~~~~e~~~l~~l~~~~~~vi~~gg 103 (199)
T 3vaa_A 24 AMVRIFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTERGEAGFRELERNMLHEVAEFENVVISTGG 103 (199)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEECCT
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHcCCCEEcchHHHHHHhCCcHHHHHHhcChHHHHHHHHHHHHHHhhcCCcEEECCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred CCCcccCcHHHHHHHh-cCcEEEEEcChhhhchhh
Q 019172 265 GQQGAAARADKWQHLY-AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 265 G~~~avlr~~~r~~L~-~G~VV~Ld~s~a~~~~~R 298 (345)
| .+..+++++.|. .+.+|||++|.++. ..|
T Consensus 104 g---~~~~~~~~~~l~~~~~vi~L~~~~e~l-~~R 134 (199)
T 3vaa_A 104 G---APCFYDNMEFMNRTGKTVFLNVHPDVL-FRR 134 (199)
T ss_dssp T---GGGSTTHHHHHHHHSEEEEEECCHHHH-HHH
T ss_pred c---EEccHHHHHHHHcCCEEEEEECCHHHH-HHH
Confidence 8 488999999886 69999999999876 445
No 4
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=99.80 E-value=1.3e-19 Score=154.19 Aligned_cols=105 Identities=20% Similarity=0.223 Sum_probs=91.5
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCE-EEEcCC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRA-VVATLG 264 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~-VIAtGG 264 (345)
-.+|+|+|++||||||+|+.||+.||++++|+|+++++..|+++.+++...|++.|++.|.+++.++....++ ||++|+
T Consensus 7 ~~~i~l~G~~GsGKSTva~~La~~lg~~~id~D~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~Vi~~g~ 86 (168)
T 1zuh_A 7 MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPHVISTGG 86 (168)
T ss_dssp -CEEEEESCTTSSHHHHHHHHHHHHTCCEEEHHHHHHHHHTSCHHHHHHHTCHHHHHHHHHHHHHHHHTCSSCCEEECCG
T ss_pred cceEEEECCCCCCHHHHHHHHHHHhCCCEEEChHHHHHHhCCCHHHHHHHhCHHHHHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3689999999999999999999999999999999999999999999999999999999999999998766677 999888
Q ss_pred CCCcccCcHHHHHHHh-cCcEEEEEcChhhhchhh
Q 019172 265 GQQGAAARADKWQHLY-AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 265 G~~~avlr~~~r~~L~-~G~VV~Ld~s~a~~~~~R 298 (345)
|. ++. ++ |+ .+.+|||++|+++. ..|
T Consensus 87 g~---~~~-~~---l~~~~~vi~l~~~~e~~-~~R 113 (168)
T 1zuh_A 87 GI---VMH-EN---LKGLGTTFYLKMDFETL-IKR 113 (168)
T ss_dssp GG---GGC-GG---GTTSEEEEEEECCHHHH-HHH
T ss_pred CE---ech-hH---HhcCCEEEEEECCHHHH-HHH
Confidence 73 665 44 55 57899999999865 444
No 5
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=99.79 E-value=3.3e-19 Score=153.53 Aligned_cols=105 Identities=23% Similarity=0.243 Sum_probs=95.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEcCCCC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQ 266 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAtGGG~ 266 (345)
+.|+|+|++||||||+|+.||+.||++++|+|+++++..|.++.+++...|+..|++.+.++++++....++||++|+|
T Consensus 3 ~~I~l~G~~GsGKsT~a~~La~~lg~~~id~D~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~vi~~g~~- 81 (184)
T 2iyv_A 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGG- 81 (184)
T ss_dssp CSEEEECSTTSSHHHHHHHHHHHHTCCEEEHHHHHHHHHSSCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCSEEECCTT-
T ss_pred CeEEEECCCCCCHHHHHHHHHHHcCCCEEeCchHHHHHcCCCHHHHHHHhChHHHHHHHHHHHHHHHhcCCeEEecCCc-
Confidence 5699999999999999999999999999999999999999988889988999999999999988887667789999887
Q ss_pred CcccCcHHHHHHHhcCcEEEEEcChhhh
Q 019172 267 QGAAARADKWQHLYAGFTVWLSQTEAMG 294 (345)
Q Consensus 267 ~~avlr~~~r~~L~~G~VV~Ld~s~a~~ 294 (345)
+++.+.+|+.|+.+.+|||++|.++.
T Consensus 82 --~v~~~~~~~~l~~~~vV~L~~~~e~~ 107 (184)
T 2iyv_A 82 --AVTSPGVRAALAGHTVVYLEISAAEG 107 (184)
T ss_dssp --GGGSHHHHHHHTTSCEEEEECCHHHH
T ss_pred --EEcCHHHHHHHcCCeEEEEeCCHHHH
Confidence 47888899988778999999998865
No 6
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=99.79 E-value=7.3e-19 Score=150.82 Aligned_cols=101 Identities=23% Similarity=0.224 Sum_probs=90.1
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEcCCCC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQ 266 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAtGGG~ 266 (345)
++|+|+|++||||||+|+.||+.||++|+|+|+++++..|+++.+++...|+..|++.|.++++.+....++||++|+|.
T Consensus 5 ~~i~i~G~~GsGKsTla~~La~~l~~~~~d~d~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~vi~~g~~~ 84 (175)
T 1via_A 5 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQEQKMADFFSSCEKACIATGGGF 84 (175)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHHHHHHHHHTSCHHHHHHHHCHHHHHHHHHHHHHHHTTCCSEEEECCTTG
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHcCCCEEcccHHHHHHcCCCHHHHHHHcCHHHHHHHHHHHHHHHHccCCEEEECCCCE
Confidence 37999999999999999999999999999999999999999999999889999999999999999887778999999884
Q ss_pred CcccCcHHHHHHHh-cCcEEEEEcChhhh
Q 019172 267 QGAAARADKWQHLY-AGFTVWLSQTEAMG 294 (345)
Q Consensus 267 ~~avlr~~~r~~L~-~G~VV~Ld~s~a~~ 294 (345)
++. .+ |+ .+.+|||+++.+..
T Consensus 85 ---~~~-~~---l~~~~~~i~l~~~~e~~ 106 (175)
T 1via_A 85 ---VNV-SN---LEKAGFCIYLKADFEYL 106 (175)
T ss_dssp ---GGS-TT---GGGGCEEEEEECCHHHH
T ss_pred ---ehh-hH---HhcCCEEEEEeCCHHHH
Confidence 555 33 55 68999999998865
No 7
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=99.76 E-value=2.4e-18 Score=145.48 Aligned_cols=105 Identities=21% Similarity=0.220 Sum_probs=94.8
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEcCCCC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQ 266 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAtGGG~ 266 (345)
|.|+|+|++||||||+|+.||+.||++++|+|+++++..|..+.+++...|++.|++++.+++..+.....+||++|+|
T Consensus 1 m~I~l~G~~GsGKsT~a~~L~~~l~~~~i~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~Vi~~g~~- 79 (168)
T 2pt5_A 1 MRIYLIGFMCSGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQIFEKKGEAYFRKLEFEVLKDLSEKENVVISTGGG- 79 (168)
T ss_dssp CEEEEESCTTSCHHHHHHHHHHHHTCCEEEHHHHHHHHHTSCHHHHHHHSCHHHHHHHHHHHHHHHTTSSSEEEECCHH-
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCEEECcHHHHHHcCCCHHHHHHHhChHHHHHHHHHHHHHHhccCCeEEECCCC-
Confidence 5799999999999999999999999999999999999999999999998999999999999999887667789998876
Q ss_pred CcccCcHHHHHHHh-cCcEEEEEcChhhh
Q 019172 267 QGAAARADKWQHLY-AGFTVWLSQTEAMG 294 (345)
Q Consensus 267 ~~avlr~~~r~~L~-~G~VV~Ld~s~a~~ 294 (345)
..+.+.+++.|+ .+.+|||++|+++.
T Consensus 80 --~~~~~~~~~~l~~~~~~i~l~~~~e~~ 106 (168)
T 2pt5_A 80 --LGANEEALNFMKSRGTTVFIDIPFEVF 106 (168)
T ss_dssp --HHTCHHHHHHHHTTSEEEEEECCHHHH
T ss_pred --EeCCHHHHHHHHcCCEEEEEECCHHHH
Confidence 478888888887 58999999998865
No 8
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=99.76 E-value=3.5e-18 Score=144.76 Aligned_cols=107 Identities=28% Similarity=0.318 Sum_probs=95.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEcCCCC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQ 266 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAtGGG~ 266 (345)
+.|+|+|++||||||+|+.||+.||++++|+|+++++..|.++.+++...|++.|++++..+++.+. ..++||++|||
T Consensus 3 ~~I~l~G~~GsGKsT~a~~La~~lg~~~id~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~vi~~g~~- 80 (173)
T 1e6c_A 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEALQAVA-TPNRVVATGGG- 80 (173)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEECCTT-
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhCCcEEcccHHHHHHhCCCHHHHHHHcCHHHHHHHHHHHHHHhh-cCCeEEECCCc-
Confidence 4699999999999999999999999999999999998889899888888899999999999998887 56789999987
Q ss_pred CcccCcHHHHHHHh-cCcEEEEEcChhhhchhh
Q 019172 267 QGAAARADKWQHLY-AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 267 ~~avlr~~~r~~L~-~G~VV~Ld~s~a~~~~~R 298 (345)
.++.+.+++.|+ .+.+|||++|+++. ..|
T Consensus 81 --~~~~~~~~~~l~~~~~~i~l~~~~e~~-~~R 110 (173)
T 1e6c_A 81 --MVLLEQNRQFMRAHGTVVYLFAPAEEL-ALR 110 (173)
T ss_dssp --GGGSHHHHHHHHHHSEEEEEECCHHHH-HHH
T ss_pred --EEeCHHHHHHHHcCCeEEEEECCHHHH-HHH
Confidence 478888999886 68999999998865 444
No 9
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=99.74 E-value=8e-18 Score=142.86 Aligned_cols=106 Identities=23% Similarity=0.276 Sum_probs=95.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEcCCC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAtGGG 265 (345)
++.|+|+|++||||||+++.||..+|++++|+|+++++..|..+..+++..|++.|+..|..++..+....++|+++|+|
T Consensus 4 ~~~i~l~G~~GsGKSTl~~~La~~l~~~~id~d~~~~~~~~~~i~~i~~~~g~~~~~~~~~~~l~~l~~~~~~v~~~~~~ 83 (173)
T 1kag_A 4 KRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGG 83 (173)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHTTCEEEEHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSSEEEECCTT
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhCCCEEeccHHHHHHhCcCHHHHHHHHhHHHHHHHHHHHHHHHHhCCCeEEECCCe
Confidence 46799999999999999999999999999999999988888889999988999999999998999887777899999876
Q ss_pred CCcccCcHHHHHHHh-cCcEEEEEcChhhh
Q 019172 266 QQGAAARADKWQHLY-AGFTVWLSQTEAMG 294 (345)
Q Consensus 266 ~~~avlr~~~r~~L~-~G~VV~Ld~s~a~~ 294 (345)
.++.+.+++.|+ .|.+|||++++++.
T Consensus 84 ---~~~~~~~~~~l~~~~~~i~l~~~~~~l 110 (173)
T 1kag_A 84 ---SVKSRETRNRLSARGVVVYLETTIEKQ 110 (173)
T ss_dssp ---GGGSHHHHHHHHHHSEEEECCCCHHHH
T ss_pred ---EEecHHHHHHHHhCCEEEEEeCCHHHH
Confidence 478888999887 69999999998865
No 10
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=99.53 E-value=7.1e-14 Score=119.17 Aligned_cols=139 Identities=12% Similarity=0.018 Sum_probs=91.3
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHH-----H-HHcCchhhhhhccChHHHHHHHHHHHHHHhcCCC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLE-----T-FAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVR 257 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE-----~-~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~ 257 (345)
..++.|+|+|++||||||+++.|+..+|+.++|+|++.. + ..|+.+.+ ..++.+|+.+|..+...+..+..
T Consensus 6 ~~g~~i~l~G~~GsGKSTl~~~l~~~~g~~~i~~d~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 82 (175)
T 1knq_A 6 HDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLND---DDRKPWLQALNDAAFAMQRTNKV 82 (175)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHHTCEEEEGGGGCCHHHHHHHHTTCCCCH---HHHHHHHHHHHHHHHHHHHHCSE
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHhhCcEEEeCccccchHHHHHhhcCcCCCc---cccccHHHHHHHHHHHHHhcCCc
Confidence 457789999999999999999999999999999999842 2 23554442 34667788887644333333445
Q ss_pred EEEEcCCCCCcccCcHHHHHHHh-cC---cEEEEEcChhhhchhhhhhhcccc--cc--------ccc--cceeeeeecc
Q 019172 258 AVVATLGGQQGAAARADKWQHLY-AG---FTVWLSQTEAMGKLLRVFVLSLHL--RS--------VTS--YFVRLEFVSS 321 (345)
Q Consensus 258 ~VIAtGGG~~~avlr~~~r~~L~-~G---~VV~Ld~s~a~~~~~Rv~v~~~h~--R~--------~~~--~~~~le~i~~ 321 (345)
+||++|+ +.+.+++.++ .+ .+|||++|+++. ..|...+..+. ++ +.. |.....++.|
T Consensus 83 ~vi~~~~------~~~~~~~~l~~~~~~~~vv~l~~~~e~~-~~R~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Id 155 (175)
T 1knq_A 83 SLIVCSA------LKKHYRDLLREGNPNLSFIYLKGDFDVI-ESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVD 155 (175)
T ss_dssp EEEECCC------CSHHHHHHHHTTCTTEEEEEEECCHHHH-HHHHHTSTTCCCCHHHHHHHHHHCCCCCTTCTTEEEEE
T ss_pred EEEEeCc------hHHHHHHHHHhcCCCEEEEEEECCHHHH-HHHHHhccCCCCchHHHHHHHHhhhCcccCCCCeEEEe
Confidence 7777764 5677888887 34 699999998865 44432221110 11 111 2222345566
Q ss_pred CCCChHHHhhh
Q 019172 322 FSRTNEHIMAR 332 (345)
Q Consensus 322 ~~r~~~~~~~~ 332 (345)
-++++|++..+
T Consensus 156 ~~~~~~~~~~~ 166 (175)
T 1knq_A 156 IDQPLEGVVAS 166 (175)
T ss_dssp CSSCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 67788887654
No 11
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=99.51 E-value=6.7e-14 Score=119.10 Aligned_cols=112 Identities=16% Similarity=0.018 Sum_probs=75.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceee--CcHHHHHHHcC--------chhhhhhccChHHHHHHHHHH---HHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLS--TKELLETFAKQ--------TIDSWMLAEGSDSVVNGECDV---LES 251 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID--~D~lIE~~~g~--------sI~ei~~~~Gee~FRelE~~v---L~~ 251 (345)
.++.|+|+|+|||||||+|+.||+.|+.+|++ .|++++...+. ++.+++...+++.|+..+..+ ++.
T Consensus 2 ~~~~i~l~G~~GsGKST~a~~La~~l~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (178)
T 1qhx_A 2 TTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIGPEFRALEGAWAEGVVA 81 (178)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHHHHHHHSCGGGGTSTTSEEECTTSCEEECHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHhcCCCeEEeccchHhhhcchhhccchhhccccCCCccccchhHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999886 88888765442 223333445678888887665 455
Q ss_pred HhcCCC-EEEEcCCCCCcccCcHHHHHHHhc-C-cEEEEEcChhhhchhh
Q 019172 252 LSSHVR-AVVATLGGQQGAAARADKWQHLYA-G-FTVWLSQTEAMGKLLR 298 (345)
Q Consensus 252 L~~~~~-~VIAtGGG~~~avlr~~~r~~L~~-G-~VV~Ld~s~a~~~~~R 298 (345)
+..... +||++.-. ++...++.+++.++. + .+|||+++.+.. ..|
T Consensus 82 ~~~~g~~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~~~~e~l-~~R 129 (178)
T 1qhx_A 82 MARAGARIIIDDVFL-GGAAAQERWRSFVGDLDVLWVGVRCDGAVA-EGR 129 (178)
T ss_dssp HHHTTCEEEEEECCT-TTHHHHHHHHHHHTTCCEEEEEEECCHHHH-HHH
T ss_pred HHhcCCeEEEEeccc-cChHHHHHHHHHhcCCcEEEEEEECCHHHH-HHH
Confidence 554443 45544210 001235567777763 4 578999988755 444
No 12
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=99.47 E-value=1.2e-13 Score=114.75 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=92.9
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCc----------hhhhhhccChHHHHHHHHHHHHHHhcCC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQT----------IDSWMLAEGSDSVVNGECDVLESLSSHV 256 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~s----------I~ei~~~~Gee~FRelE~~vL~~L~~~~ 256 (345)
+.|+|+|++||||||+|+.| +.+|++++++|+++++..+.. ...+++..|++.|+++..+.++. ...
T Consensus 2 ~~I~l~G~~GsGKsT~a~~L-~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~ 78 (179)
T 3lw7_A 2 KVILITGMPGSGKSEFAKLL-KERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKRLREIYGDGVVARLCVEELGT--SNH 78 (179)
T ss_dssp CEEEEECCTTSCHHHHHHHH-HHTTCEEEEHHHHHHHHHHHHC---CCHHHHHHHHHHHHCTTHHHHHHHHHHCS--CCC
T ss_pred cEEEEECCCCCCHHHHHHHH-HHCCCcEEEHhHHHHHHHHhcCCChhHHHHHHHHHHhhCCHHHHHHHHHHHHHh--cCC
Confidence 57999999999999999999 999999999999998765321 23344446888888777666542 334
Q ss_pred CEEEEcCCCCCcccCcHHHHHHHhc--C---cEEEEEcChhhhchhhhhhhcc----------ccc-------cccccce
Q 019172 257 RAVVATLGGQQGAAARADKWQHLYA--G---FTVWLSQTEAMGKLLRVFVLSL----------HLR-------SVTSYFV 314 (345)
Q Consensus 257 ~~VIAtGGG~~~avlr~~~r~~L~~--G---~VV~Ld~s~a~~~~~Rv~v~~~----------h~R-------~~~~~~~ 314 (345)
..||.+|- ...+.++.|+. + .+|||++|.++. ..|...+.. ..| +...+..
T Consensus 79 ~~vi~dg~------~~~~~~~~l~~~~~~~~~~i~l~~~~~~~-~~R~~~R~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 151 (179)
T 3lw7_A 79 DLVVFDGV------RSLAEVEEFKRLLGDSVYIVAVHSPPKIR-YKRMIERLRSDDSKEISELIRRDREELKLGIGEVIA 151 (179)
T ss_dssp SCEEEECC------CCHHHHHHHHHHHCSCEEEEEEECCHHHH-HHHHHTCC----CCCHHHHHHHHHHHHHHTHHHHHH
T ss_pred CeEEEeCC------CCHHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHhccCCCCcchHHHHHHHHHhhhccChHhHHH
Confidence 55666652 66777777752 2 799999999865 333222111 001 1222334
Q ss_pred eeeeeccCCCChHHHhhhcchhhh
Q 019172 315 RLEFVSSFSRTNEHIMARKPAVMK 338 (345)
Q Consensus 315 ~le~i~~~~r~~~~~~~~~~~~~~ 338 (345)
...++.+-..+.|++..+--++++
T Consensus 152 ~ad~vId~~~~~~~~~~~i~~~l~ 175 (179)
T 3lw7_A 152 MADYIITNDSNYEEFKRRCEEVTD 175 (179)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHH
T ss_pred hCCEEEECCCCHHHHHHHHHHHHH
Confidence 445666666677877665444443
No 13
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=99.43 E-value=1.6e-13 Score=122.89 Aligned_cols=102 Identities=12% Similarity=0.054 Sum_probs=66.0
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH---HcCchhhhhhccChHH--HH----------------
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF---AKQTIDSWMLAEGSDS--VV---------------- 242 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~---~g~sI~ei~~~~Gee~--FR---------------- 242 (345)
++.+.|.|.|++||||||||+.||++||++|+| ++++++. .|++. ++++..|+.. |+
T Consensus 4 m~~~iI~i~g~~GsGk~ti~~~la~~lg~~~~D-~~~~~~~a~~~g~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 81 (201)
T 3fdi_A 4 MKQIIIAIGREFGSGGHLVAKKLAEHYNIPLYS-KELLDEVAKDGRYSK-EVLERFDEKPMNFAFIPVPAGGTTISLEQD 81 (201)
T ss_dssp --CCEEEEEECTTSSHHHHHHHHHHHTTCCEEC-HHHHHHTTCC----------------------------------CH
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHHHhCcCEEC-HHHHHHHHHhcCCCH-HHHHHHhhhchhHHHHHhccccccccccHH
Confidence 345689999999999999999999999999999 7777654 45664 4666667665 34
Q ss_pred --HHHHHHHHHHh--cCCCEEEEcCCCCCcccCcHHHHHHHhcCcEEEEEcChhhh
Q 019172 243 --NGECDVLESLS--SHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMG 294 (345)
Q Consensus 243 --elE~~vL~~L~--~~~~~VIAtGGG~~~avlr~~~r~~L~~G~VV~Ld~s~a~~ 294 (345)
+.|.++++++. ...++||...||. .++.. + .++.+|||++|.+..
T Consensus 82 ~~~~~~~~i~~la~~~~~~~Vi~Gr~g~--~vl~~-~----~~~~~V~L~A~~e~r 130 (201)
T 3fdi_A 82 IAIRQFNFIRKKANEEKESFVIVGRCAE--EILSD-N----PNMISAFILGDKDTK 130 (201)
T ss_dssp HHHHHHHHHHHHHHTSCCCEEEESTTHH--HHTTT-C----TTEEEEEEEECHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCEEEEECCcc--hhcCC-C----CCeEEEEEECCHHHH
Confidence 67899999998 7778888753431 23332 1 247899999998865
No 14
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=99.40 E-value=9.1e-13 Score=117.06 Aligned_cols=106 Identities=11% Similarity=0.042 Sum_probs=72.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChH----HHHH-HHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSD----SVVN-GECDVLESLS 253 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee----~FRe-lE~~vL~~L~ 253 (345)
.++.|+|+|++||||||+|+.||+.||++++|+|+++++. .|..+.+++.. |+. .|.. ++..+.....
T Consensus 4 ~~~~I~l~G~~GsGKsT~~~~La~~l~~~~i~~d~~~~~~~~~~~~~g~~i~~~~~~-g~~~~~~~~~~~~~~~~~~~~~ 82 (222)
T 1zak_A 4 DPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEK-GQLVPDEIVVNMVKERLRQPDA 82 (222)
T ss_dssp CSCCEEEEESTTSSHHHHHHHHHHHHCCEECCHHHHHHHHHHHTCHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHSHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCceecHHHHHHHHHHcCCchhHHHHHHHHc-CCcCCHHHHHHHHHHHHhhccc
Confidence 4578999999999999999999999999999999998873 45556666643 432 2333 3333333222
Q ss_pred cCCCEEEEcCCCCCcccCcHHHHHHHh-c----CcEEEEEcChhhhchhh
Q 019172 254 SHVRAVVATLGGQQGAAARADKWQHLY-A----GFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 254 ~~~~~VIAtGGG~~~avlr~~~r~~L~-~----G~VV~Ld~s~a~~~~~R 298 (345)
...++|| .|. +...+.+..|. . +.+|||++++++. ..|
T Consensus 83 ~~~~~vi-dg~-----~~~~~~~~~l~~~~~~~~~vi~L~~~~~~~-~~R 125 (222)
T 1zak_A 83 QENGWLL-DGY-----PRSYSQAMALETLEIRPDTFILLDVPDELL-VER 125 (222)
T ss_dssp HHTCEEE-ESC-----CCSHHHHHHHHTTTCCCSEEEEEECCHHHH-HHH
T ss_pred cCCcEEE-ECC-----CCCHHHHHHHHHcCCCCCEEEEEECCHHHH-HHH
Confidence 2345667 553 34445556665 2 5799999999865 444
No 15
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=99.40 E-value=4.7e-13 Score=114.62 Aligned_cols=102 Identities=17% Similarity=0.097 Sum_probs=75.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHHHhcCCCE
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRA 258 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~ 258 (345)
.++.|+|+|++||||||+|+.||+.+|++++|+|+++++. .|..+.+++.. |+..+++.+..++.+...+.
T Consensus 3 ~g~~I~l~G~~GsGKST~~~~La~~l~~~~i~~d~~~~~~~~~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~l~~~-- 79 (186)
T 3cm0_A 3 VGQAVIFLGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMER-GDLVPDDLILELIREELAER-- 79 (186)
T ss_dssp CEEEEEEECCTTSCHHHHHHHHHHHHTCEEECHHHHHHHHHHTTCHHHHHHHHHHHT-TCCCCHHHHHHHHHHHCCSE--
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCeEecHHHHHHHHHHcCChHHHHHHHHHHc-CCcCCHHHHHHHHHHHhcCC--
Confidence 4678999999999999999999999999999999998865 34556777754 77778887777777765543
Q ss_pred EEEcCCCCCcccCcHHHHH----HHh-----cCcEEEEEcChhhh
Q 019172 259 VVATLGGQQGAAARADKWQ----HLY-----AGFTVWLSQTEAMG 294 (345)
Q Consensus 259 VIAtGGG~~~avlr~~~r~----~L~-----~G~VV~Ld~s~a~~ 294 (345)
||..|. +.....+. ++. .+.+|||++|+++.
T Consensus 80 ~i~dg~-----~~~~~~~~~l~~~l~~~~~~~~~vi~l~~~~e~~ 119 (186)
T 3cm0_A 80 VIFDGF-----PRTLAQAEALDRLLSETGTRLLGVVLVEVPEEEL 119 (186)
T ss_dssp EEEESC-----CCSHHHHHHHHHHHHHTTEEEEEEEEEECCHHHH
T ss_pred EEEeCC-----CCCHHHHHHHHHHHHhcCCCCCEEEEEeCCHHHH
Confidence 554443 23333332 333 24799999998765
No 16
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=99.39 E-value=5.7e-13 Score=119.09 Aligned_cols=148 Identities=14% Similarity=0.063 Sum_probs=97.1
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHH---------------HHH-H
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV---------------NGE-C 246 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FR---------------elE-~ 246 (345)
..-.+.|.|+|++||||||+|+.||+.+|++++|+|+++++.++..+.++++..|++.|. ..| .
T Consensus 9 ~~~~~iIgltG~~GSGKSTva~~L~~~lg~~vid~D~~~~~~~~~~~~~i~~~fG~~~~~~g~ldr~~L~~~vF~~~~~~ 88 (192)
T 2grj_A 9 HHHHMVIGVTGKIGTGKSTVCEILKNKYGAHVVNVDRIGHEVLEEVKEKLVELFGGSVLEDGKVNRKKLAGIVFESRENL 88 (192)
T ss_dssp -CCEEEEEEECSTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHHTHHHHHHHHCGGGBSSSSBCHHHHHHHHTTCHHHH
T ss_pred cccceEEEEECCCCCCHHHHHHHHHHhcCCEEEECcHHHHHHHHHHHHHHHHHhChhhcCCCCcCHHHHHHHHhCCHHHH
Confidence 344578999999999999999999999999999999999988876777777777766441 111 1
Q ss_pred HHH-------------HHHhcCCCEEEEcCCCCCcccCcHHHHHHHhcCcEEEEEcChhhhchhhhhhhccccccc--cc
Q 019172 247 DVL-------------ESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMGKLLRVFVLSLHLRSV--TS 311 (345)
Q Consensus 247 ~vL-------------~~L~~~~~~VIAtGGG~~~avlr~~~r~~L~~G~VV~Ld~s~a~~~~~Rv~v~~~h~R~~--~~ 311 (345)
..+ +.+......||.-+. .+.+..+.. ..+.+|||++|+++. ..|. -..+++. ..
T Consensus 89 ~~l~~i~hP~i~~~~~~~~~~~~~~vv~d~p-----ll~e~~~~~-~~d~vi~v~a~~e~r-~~Rl---i~~q~~~~~~~ 158 (192)
T 2grj_A 89 KKLELLVHPLMKKRVQEIINKTSGLIVIEAA-----LLKRMGLDQ-LCDHVITVVASRETI-LKRN---READRRLKFQE 158 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEECT-----TTTTTTGGG-GCSEEEEEECCHHHH-HHHC---SSHHHHHTTCT
T ss_pred HHHHhhhCHHHHHHHHHHHHHcCCEEEEEEe-----ceeecChHH-hCCEEEEEECCHHHH-HHHH---HHhcCCchhhh
Confidence 111 122222345555433 233333221 158899999999866 4554 1122333 34
Q ss_pred cceeeeeeccCCCChHHHhhhcchhhhhh
Q 019172 312 YFVRLEFVSSFSRTNEHIMARKPAVMKTL 340 (345)
Q Consensus 312 ~~~~le~i~~~~r~~~~~~~~~~~~~~~~ 340 (345)
......++.+-+.+.|++...--.+++.|
T Consensus 159 ~~~~AD~vI~n~~~~~~l~~~v~~~~~~l 187 (192)
T 2grj_A 159 DIVPQGIVVANNSTLEDLEKKVEEVMKLV 187 (192)
T ss_dssp TCCCCSEEEECSSCHHHHHHHHHHHHHHH
T ss_pred HHhcCCEEEECCCCHHHHHHHHHHHHHHH
Confidence 45667788887888888877655555544
No 17
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=99.39 E-value=6.1e-13 Score=118.78 Aligned_cols=109 Identities=11% Similarity=0.078 Sum_probs=75.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH------cCchhhhhhccChHHHHHHHHHHH-HHHhc--C
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA------KQTIDSWMLAEGSDSVVNGECDVL-ESLSS--H 255 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~------g~sI~ei~~~~Gee~FRelE~~vL-~~L~~--~ 255 (345)
+++.|+|+|++||||||+|+.||+.||++++|+|+++.+.. |..+.+++.. |+..+++.+..++ +.+.. .
T Consensus 6 ~~~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~~~~~~~~~~~~~g~~i~~~~~~-g~~~~~~~~~~~~~~~l~~~~~ 84 (227)
T 1zd8_A 6 RLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFIDQ-GKLIPDDVMTRLALHELKNLTQ 84 (227)
T ss_dssp -CCEEEEEECTTSSHHHHHHHHHHHSSSEEEEHHHHHHHHHHHTCHHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHTCTT
T ss_pred cCcEEEEECCCCCCHHHHHHHHHHHcCCeEEechHHHHHhhhcCChHHHHHHHHHHc-CCcCCHHHHHHHHHHHHhcccC
Confidence 45789999999999999999999999999999999988754 4556666654 6666666655544 34442 3
Q ss_pred CCEEEEcCCCCCcccCcHHHHHHHh-cCcEEEEEcChhhhchhh
Q 019172 256 VRAVVATLGGQQGAAARADKWQHLY-AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 256 ~~~VIAtGGG~~~avlr~~~r~~L~-~G~VV~Ld~s~a~~~~~R 298 (345)
..+||..+++ .....+.+..+. .+.+|||+++.+.. ..|
T Consensus 85 ~~~vid~~~~---~~~~~~~l~~~~~~~~vi~L~~~~~~~-~~R 124 (227)
T 1zd8_A 85 YSWLLDGFPR---TLPQAEALDRAYQIDTVINLNVPFEVI-KQR 124 (227)
T ss_dssp SCEEEESCCC---SHHHHHHHHTTSCCCEEEEEECCHHHH-HHH
T ss_pred CCEEEeCCCC---CHHHHHHHHHhcCCCEEEEEECCHHHH-HHH
Confidence 4566665554 232333333333 57899999999865 444
No 18
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=99.39 E-value=8.3e-13 Score=117.60 Aligned_cols=109 Identities=15% Similarity=0.084 Sum_probs=77.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHHHhcC---
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLESLSSH--- 255 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~--- 255 (345)
+++.|+|+|++||||||+|+.||+.||++++|+|+++++. .|..+.+++.. |+..+++.+.+++......
T Consensus 4 ~~~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~li~~~~~~~t~~g~~i~~~~~~-g~~~~~~~~~~~i~~~l~~~~~ 82 (217)
T 3be4_A 4 KKHNLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNGTKIGLEAKSIIES-GNFVGDEIVLGLVKEKFDLGVC 82 (217)
T ss_dssp GCCEEEEEECTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHTC--CCHHHHHHHHH-TCCCCHHHHHHHHHHHHHTTTT
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHhCceEEehhHHHHHHHHcCCHHHHHHHHHHHC-CCcCCHHHHHHHHHHHHhcccc
Confidence 4678999999999999999999999999999999999876 35567777754 7777788777776553321
Q ss_pred CCEEEEcCCCCCcccCc---HHHHH-HHh-cC----cEEEEEcChhhhchhhhh
Q 019172 256 VRAVVATLGGQQGAAAR---ADKWQ-HLY-AG----FTVWLSQTEAMGKLLRVF 300 (345)
Q Consensus 256 ~~~VIAtGGG~~~avlr---~~~r~-~L~-~G----~VV~Ld~s~a~~~~~Rv~ 300 (345)
.+.||..|- +.. .+.+. .+. .| .+|||++++++. ..|..
T Consensus 83 ~~~~i~dg~-----~~~~~~~~~l~~~l~~~~~~~d~vi~L~~~~e~~-~~Rl~ 130 (217)
T 3be4_A 83 VNGFVLDGF-----PRTIPQAEGLAKILSEIGDSLTSVIYFEIDDSEI-IERIS 130 (217)
T ss_dssp TTCEEEESC-----CCSHHHHHHHHHHHHHHTCCCCEEEEEECCHHHH-HHHHH
T ss_pred CCCEEEeCC-----CCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHHH
Confidence 333444442 222 22223 332 33 799999999876 55543
No 19
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=99.38 E-value=5.3e-12 Score=110.82 Aligned_cols=139 Identities=9% Similarity=-0.026 Sum_probs=92.0
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHH------HHcCchhhhhhccChHHHHHHHHHHHHHHhcCCC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET------FAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVR 257 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~------~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~ 257 (345)
..+..|+|+|++||||||+++.|+..+|+.++|+|++... ..|..+.+ ..+..+++.+|..++..+.....
T Consensus 27 ~~g~~i~l~G~~GsGKSTl~~~L~~~~g~~~i~~d~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~g~~ 103 (200)
T 4eun_A 27 EPTRHVVVMGVSGSGKTTIAHGVADETGLEFAEADAFHSPENIATMQRGIPLTD---EDRWPWLRSLAEWMDARADAGVS 103 (200)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHHCCEEEEGGGGSCHHHHHHHHTTCCCCH---HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHhhCCeEEcccccccHHHHHHHhcCCCCCC---cccccHHHHHHHHHHHHHhcCCC
Confidence 3578899999999999999999999999999999998432 22333322 23455677777777766666566
Q ss_pred EEEEcCCCCCcccCcHHHHHHHhc----CcEEEEEcChhhhchhhhhhhcccccc---c--------cccceeeeeeccC
Q 019172 258 AVVATLGGQQGAAARADKWQHLYA----GFTVWLSQTEAMGKLLRVFVLSLHLRS---V--------TSYFVRLEFVSSF 322 (345)
Q Consensus 258 ~VIAtGGG~~~avlr~~~r~~L~~----G~VV~Ld~s~a~~~~~Rv~v~~~h~R~---~--------~~~~~~le~i~~~ 322 (345)
+||+++. +.+.+++.++. ..+|||+++.++. ..|...+..+... + .-|.....++.|-
T Consensus 104 viid~~~------~~~~~~~~l~~~~~~~~vv~l~~~~e~l-~~Rl~~R~~~~~~~~~l~~~~~~~~~~~~~~~~~~Id~ 176 (200)
T 4eun_A 104 TIITCSA------LKRTYRDVLREGPPSVDFLHLDGPAEVI-KGRMSKREGHFMPASLLQSQLATLEALEPDESGIVLDL 176 (200)
T ss_dssp EEEEECC------CCHHHHHHHTTSSSCCEEEEEECCHHHH-HHHHTTCSCCSSCGGGHHHHHHHCCCCCTTSCEEEEET
T ss_pred EEEEchh------hhHHHHHHHHHhCCceEEEEEeCCHHHH-HHHHHhcccCCCCHHHHHHHHHHhCCCCCCCCeEEEEC
Confidence 7777753 67888888873 5799999998865 4443222111110 0 1112223455666
Q ss_pred CCChHHHhhh
Q 019172 323 SRTNEHIMAR 332 (345)
Q Consensus 323 ~r~~~~~~~~ 332 (345)
+++.|++.++
T Consensus 177 ~~~~~e~~~~ 186 (200)
T 4eun_A 177 RQPPEQLIER 186 (200)
T ss_dssp TSCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 7788877653
No 20
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=99.35 E-value=3.3e-12 Score=111.62 Aligned_cols=136 Identities=15% Similarity=0.064 Sum_probs=82.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHH--HHcCchhhhhhc-cChHHHHHHHHHHHHHHhcCCCEEEEc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET--FAKQTIDSWMLA-EGSDSVVNGECDVLESLSSHVRAVVAT 262 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~--~~g~sI~ei~~~-~Gee~FRelE~~vL~~L~~~~~~VIAt 262 (345)
.+.|+|+|++||||||+|+.|++.+|+.++|+|+++.. ..++.....+.. ..+.+++.++.. +..+..+||.+
T Consensus 18 ~~~I~l~G~~GsGKSTla~~L~~~lg~~~i~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~----~~~~~~vivd~ 93 (202)
T 3t61_A 18 PGSIVVMGVSGSGKSSVGEAIAEACGYPFIEGDALHPPENIRKMSEGIPLTDDDRWPWLAAIGER----LASREPVVVSC 93 (202)
T ss_dssp SSCEEEECSTTSCHHHHHHHHHHHHTCCEEEGGGGCCHHHHHHHHHTCCCCHHHHHHHHHHHHHH----HTSSSCCEEEC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCEEEeCCcCcchhhHHHHhcCCCCCchhhHHHHHHHHHH----HhcCCCEEEEC
Confidence 46899999999999999999999999999999998532 111122222221 123334333322 23334456665
Q ss_pred CCCCCcccCcHHHHHHHhc-----CcEEEEEcChhhhchhhhhhhcccccc---ccc--------cceeeeeeccCCCCh
Q 019172 263 LGGQQGAAARADKWQHLYA-----GFTVWLSQTEAMGKLLRVFVLSLHLRS---VTS--------YFVRLEFVSSFSRTN 326 (345)
Q Consensus 263 GGG~~~avlr~~~r~~L~~-----G~VV~Ld~s~a~~~~~Rv~v~~~h~R~---~~~--------~~~~le~i~~~~r~~ 326 (345)
++ +.+..++.+.. ..+|||+++.++. ..|...+..+.++ +.. +.....++.|-++++
T Consensus 94 ~~------~~~~~~~~l~~~~~~~~~vi~l~~~~e~~-~~Rl~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~Id~~~~~ 166 (202)
T 3t61_A 94 SA------LKRSYRDKLRESAPGGLAFVFLHGSESVL-AERMHHRTGHFMPSSLLQTQLETLEDPRGEVRTVAVDVAQPL 166 (202)
T ss_dssp CC------CSHHHHHHHHHTSTTCCEEEEEECCHHHH-HHHHHHHHSSCCCHHHHHHHHHHCCCCTTSTTEEEEESSSCH
T ss_pred CC------CCHHHHHHHHHhcCCCeEEEEEeCCHHHH-HHHHHHhhccCCCHHHHHHHHHhcCCCCCCCCeEEEeCCCCH
Confidence 43 56777887762 4799999998865 4443333222111 011 112234456777888
Q ss_pred HHHhhh
Q 019172 327 EHIMAR 332 (345)
Q Consensus 327 ~~~~~~ 332 (345)
|++.++
T Consensus 167 ~e~~~~ 172 (202)
T 3t61_A 167 AEIVRE 172 (202)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 21
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=99.35 E-value=3e-12 Score=109.95 Aligned_cols=104 Identities=16% Similarity=0.184 Sum_probs=71.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHH----Hhc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLES----LSS 254 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~----L~~ 254 (345)
+++.|+|+|++||||||+|+.||+.||++++|+|+++.+. .|..+.+++. .|+..|++....++.+ ...
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~La~~l~~~~i~~d~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~i~~~~~ 86 (196)
T 2c95_A 8 KTNIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIME-KGQLVPLETVLDMLRDAMVAKVN 86 (196)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHTTCHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhCCeEEcHHHHHHHHHHcCChHHHHHHHHHH-cCCcCCHHHHHHHHHHHHHhccc
Confidence 4678999999999999999999999999999999998773 3455666665 4665555544443332 222
Q ss_pred CCCEEEEcCCCCCcccCcHHHHHHH----h-cCcEEEEEcChhhh
Q 019172 255 HVRAVVATLGGQQGAAARADKWQHL----Y-AGFTVWLSQTEAMG 294 (345)
Q Consensus 255 ~~~~VIAtGGG~~~avlr~~~r~~L----~-~G~VV~Ld~s~a~~ 294 (345)
....||..|- +...+.++.+ . .+.+|||++|+++.
T Consensus 87 ~~~~vi~d~~-----~~~~~~~~~~~~~~~~~~~vi~l~~~~e~~ 126 (196)
T 2c95_A 87 TSKGFLIDGY-----PREVQQGEEFERRIGQPTLLLYVDAGPETM 126 (196)
T ss_dssp TCSCEEEESC-----CCSHHHHHHHHHHTCCCSEEEEEECCHHHH
T ss_pred cCCcEEEeCC-----CCCHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence 3344555442 2333333332 2 46899999998865
No 22
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=99.33 E-value=2.3e-12 Score=114.30 Aligned_cols=107 Identities=12% Similarity=0.077 Sum_probs=74.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHHHhc----
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLESLSS---- 254 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~L~~---- 254 (345)
+++.|+|+|++||||||+|+.||+.||++++|+|+++++. .|..+.+++. .|+..+++.+..++.+...
T Consensus 3 ~~~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~~~~~~~~~~~~~g~~i~~~~~-~g~~~~~~~~~~~l~~~l~~~~~ 81 (220)
T 1aky_A 3 ESIRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMD-QGGLVSDDIMVNMIKDELTNNPA 81 (220)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHTTCHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHCGG
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHcCceEEehhHHHHHHHHcCChHHHHHHHHHH-CCCcCCHHHHHHHHHHHHHhccc
Confidence 4678999999999999999999999999999999999875 3555666665 4666667766666655332
Q ss_pred -CCCEEEEcCCCCCcccCcHHHHH----HHh-cC----cEEEEEcChhhhchhhh
Q 019172 255 -HVRAVVATLGGQQGAAARADKWQ----HLY-AG----FTVWLSQTEAMGKLLRV 299 (345)
Q Consensus 255 -~~~~VIAtGGG~~~avlr~~~r~----~L~-~G----~VV~Ld~s~a~~~~~Rv 299 (345)
+..+|+ .|- +...+.++ .+. .| .+|||+++.++. ..|.
T Consensus 82 ~~~~~i~-dg~-----~~~~~~~~~l~~~l~~~~~~~d~vi~L~~~~e~~-~~R~ 129 (220)
T 1aky_A 82 CKNGFIL-DGF-----PRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELL-VARI 129 (220)
T ss_dssp GGSCEEE-ESC-----CCSHHHHHHHHHHHHHHTCCCCEEEEEECCHHHH-HHHH
T ss_pred cCCCeEE-eCC-----CCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHH
Confidence 233444 332 22222222 232 23 799999999866 5553
No 23
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=99.31 E-value=5.2e-12 Score=106.63 Aligned_cols=106 Identities=11% Similarity=0.064 Sum_probs=74.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHH-hhCCceeeCcHHHHHHHcCchh--hhhhccChHHHHHHHHHHHHHHh---cCCCEEE
Q 019172 187 TSIFLVGDSTEVNEKVALELAV-GLGYTPLSTKELLETFAKQTID--SWMLAEGSDSVVNGECDVLESLS---SHVRAVV 260 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~-~Lg~~fID~D~lIE~~~g~sI~--ei~~~~Gee~FRelE~~vL~~L~---~~~~~VI 260 (345)
+.|+|+|++||||||+|+.|++ .+|+.++++|.+.+...+.+.. ..+...++..+++...++++.+. .....||
T Consensus 3 ~~I~i~G~~GsGKST~a~~L~~~~~~~~~i~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~vi 82 (181)
T 1ly1_A 3 KIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKGVI 82 (181)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHSTTEEEECHHHHHHHHTTSCCGGGCCCCHHHHHHHHHHHHHHHHHHHTSCSSCCEEE
T ss_pred eEEEEecCCCCCHHHHHHHHHhhcCCcEEecHHHHHHHhhCCCccchhhhchhhhhHHHHHHHHHHHHHHhhccCCCeEE
Confidence 4689999999999999999999 7999999999988877665332 12334466677777667777765 4455666
Q ss_pred EcCCCCCcccCcHHHHHHHh-----cC---cEEEEEcChhhhchhh
Q 019172 261 ATLGGQQGAAARADKWQHLY-----AG---FTVWLSQTEAMGKLLR 298 (345)
Q Consensus 261 AtGGG~~~avlr~~~r~~L~-----~G---~VV~Ld~s~a~~~~~R 298 (345)
..+. ......++.+. .| .+|||+++.++. ..|
T Consensus 83 ~d~~-----~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~-~~R 122 (181)
T 1ly1_A 83 ISDT-----NLNPERRLAWETFAKEYGWKVEHKVFDVPWTEL-VKR 122 (181)
T ss_dssp ECSC-----CCSHHHHHHHHHHHHHHTCEEEEEECCCCHHHH-HHH
T ss_pred EeCC-----CCCHHHHHHHHHHHHHcCCCEEEEEEeCCHHHH-HHH
Confidence 6554 24444444442 24 589999988755 344
No 24
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=99.31 E-value=4.3e-12 Score=107.99 Aligned_cols=106 Identities=12% Similarity=0.156 Sum_probs=72.7
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH------cCchhhhhhccChHHHHHHHHHHHHHHhc--CCC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA------KQTIDSWMLAEGSDSVVNGECDVLESLSS--HVR 257 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~------g~sI~ei~~~~Gee~FRelE~~vL~~L~~--~~~ 257 (345)
++.|+|+|++||||||+|+.||+.||++++|+|+++.+.. |..+.+++. .|+..+++.+..++.+... ...
T Consensus 6 ~~~I~l~G~~GsGKsT~~~~L~~~l~~~~i~~d~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~l~~~i~~~~~~ 84 (194)
T 1qf9_A 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIK-NGEIVPSIVTVKLLKNAIDANQGK 84 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHTTCTTHHHHHHHHH-TTCCCCHHHHHHHHHHHHHTSTTC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCeEeeHHHHHHHHHhcCCHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHhcCCC
Confidence 3579999999999999999999999999999999887653 334555554 3555556666666555432 233
Q ss_pred EEEEcCCCCCcccCcHHHHHHH----h----cCcEEEEEcChhhhchhh
Q 019172 258 AVVATLGGQQGAAARADKWQHL----Y----AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 258 ~VIAtGGG~~~avlr~~~r~~L----~----~G~VV~Ld~s~a~~~~~R 298 (345)
.||..|- +...+.++.+ . .+.+|||++|+++. ..|
T Consensus 85 ~vi~d~~-----~~~~~~~~~~~~~~~~~~~~~~vi~l~~~~e~~-~~R 127 (194)
T 1qf9_A 85 NFLVDGF-----PRNEENNNSWEENMKDFVDTKFVLFFDCPEEVM-TQR 127 (194)
T ss_dssp CEEEETC-----CCSHHHHHHHHHHHTTTCEEEEEEEEECCHHHH-HHH
T ss_pred CEEEeCc-----CCCHHHHHHHHHHHhccCCCCEEEEEECCHHHH-HHH
Confidence 4554443 4555555544 2 25699999998865 444
No 25
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=99.31 E-value=6.1e-12 Score=108.28 Aligned_cols=106 Identities=17% Similarity=0.140 Sum_probs=72.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH------cCchhhhhhccChHHHHHHHHHHHH----HHhcC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA------KQTIDSWMLAEGSDSVVNGECDVLE----SLSSH 255 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~------g~sI~ei~~~~Gee~FRelE~~vL~----~L~~~ 255 (345)
++.|+|+|++||||||+|+.||+.||++++|+|+++.+.. |..+.+++. .|+..+++....++. .....
T Consensus 12 ~~~I~l~G~~GsGKsT~a~~L~~~l~~~~i~~d~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~ 90 (199)
T 2bwj_A 12 CKIIFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESERSKLIRDIME-RGDLVPSGIVLELLKEAMVASLGD 90 (199)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHHHTCHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhCCeEEcHHHHHHHHHHhCCHHHHHHHHHHH-cCCcCCHHHHHHHHHHHHhccccc
Confidence 5789999999999999999999999999999999987654 445566664 355444443333332 22223
Q ss_pred CCEEEEcCCCCCcccCcHHHHHHHh-----cCcEEEEEcChhhhchhh
Q 019172 256 VRAVVATLGGQQGAAARADKWQHLY-----AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 256 ~~~VIAtGGG~~~avlr~~~r~~L~-----~G~VV~Ld~s~a~~~~~R 298 (345)
...||..|- +...+.+..+. .+.+|||++|+++. ..|
T Consensus 91 ~~~vi~dg~-----~~~~~~~~~l~~~~~~~~~~i~l~~~~~~~-~~R 132 (199)
T 2bwj_A 91 TRGFLIDGY-----PREVKQGEEFGRRIGDPQLVICMDCSADTM-TNR 132 (199)
T ss_dssp CSCEEEETC-----CSSHHHHHHHHHHTCCCSEEEEEECCHHHH-HHH
T ss_pred CccEEEeCC-----CCCHHHHHHHHHhcCCCCEEEEEECCHHHH-HHH
Confidence 445665543 45555555443 36799999998864 344
No 26
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=99.30 E-value=4.9e-12 Score=107.83 Aligned_cols=104 Identities=18% Similarity=0.237 Sum_probs=68.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH-------cCchhhhhhccChHHHHHHHHHHHHH----H-
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA-------KQTIDSWMLAEGSDSVVNGECDVLES----L- 252 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~-------g~sI~ei~~~~Gee~FRelE~~vL~~----L- 252 (345)
+++.|+|+|++||||||+|+.||+.+|++++|.|+++++.. |..+.+++. .|+..+++.+..++.+ .
T Consensus 2 ~~~~I~l~G~~GsGKsT~a~~L~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~l~~~~~~~~ 80 (196)
T 1tev_A 2 KPLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIK-EGKIVPVEITISLLKREMDQTM 80 (196)
T ss_dssp -CEEEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHCTTSTTHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHhCCeEEeHHHHHHHHHhccCChHHHHHHHHHH-CCCcCCHHHHHHHHHHHHHhhh
Confidence 46789999999999999999999999999999999987754 223444443 4655555443333221 1
Q ss_pred --hcCCCEEEEcCCCCCcccCcHHHHHHHh--------cCcEEEEEcChhhh
Q 019172 253 --SSHVRAVVATLGGQQGAAARADKWQHLY--------AGFTVWLSQTEAMG 294 (345)
Q Consensus 253 --~~~~~~VIAtGGG~~~avlr~~~r~~L~--------~G~VV~Ld~s~a~~ 294 (345)
......||..|- +...+.++.+. .+.+|||++|+++.
T Consensus 81 ~~~~~~~~vi~dg~-----~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~e~~ 127 (196)
T 1tev_A 81 AANAQKNKFLIDGF-----PRNQDNLQGWNKTMDGKADVSFVLFFDCNNEIC 127 (196)
T ss_dssp HHCTTCCEEEEESC-----CCSHHHHHHHHHHHTTTCEEEEEEEEECCHHHH
T ss_pred ccccCCCeEEEeCC-----CCCHHHHHHHHHHhcccCCCCEEEEEECCHHHH
Confidence 112345554433 45555544321 24699999998865
No 27
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=99.29 E-value=1.7e-12 Score=126.73 Aligned_cols=81 Identities=9% Similarity=0.069 Sum_probs=72.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHH--------------HHHHHcC-----chhhh-hhccChHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKEL--------------LETFAKQ-----TIDSW-MLAEGSDSVVNG 244 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~l--------------IE~~~g~-----sI~ei-~~~~Gee~FRel 244 (345)
+++.|+|+|++|+||||||..||++++.++||+|.+ .++..|. ++.++ .+..++..|++.
T Consensus 39 ~~~lIvI~GPTgsGKTtLa~~LA~~l~~eiIs~Ds~qvYr~mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F~~~ 118 (339)
T 3a8t_A 39 KEKLLVLMGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSL 118 (339)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHTTSCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHCCCcEEcccccccccceeeecCCCCHHHHcCCCEeeccccCcccCccCHHHHHHH
Confidence 345799999999999999999999999999999998 5666666 56677 788899999999
Q ss_pred HHHHHHHHhcCCCEEEEcCCC
Q 019172 245 ECDVLESLSSHVRAVVATLGG 265 (345)
Q Consensus 245 E~~vL~~L~~~~~~VIAtGGG 265 (345)
+.++++++....+.+|.+||+
T Consensus 119 a~~~i~~i~~~g~~pIlvGGt 139 (339)
T 3a8t_A 119 AGKAVSEITGRRKLPVLVGGS 139 (339)
T ss_dssp HHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHhcCCeEEEEcCH
Confidence 999999998888899999996
No 28
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=99.29 E-value=1.2e-11 Score=108.06 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=73.4
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHHHhcC
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLESLSSH 255 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~ 255 (345)
....++.|+|+|++||||||+|+.||+.||++++|+|+++++. .|..+.+++. .|+..|++.+..++.+....
T Consensus 16 ~~~~~~~I~l~G~~GsGKST~a~~La~~l~~~~i~~d~~~r~~~~~~~~~g~~i~~~~~-~g~~~~~~~~~~~~~~~~~~ 94 (201)
T 2cdn_A 16 PRGSHMRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLD-AGDLVPSDLTNELVDDRLNN 94 (201)
T ss_dssp CCCSCCEEEEECCTTSSHHHHHHHHHHHHTCCEEEHHHHHHHHHHTTCHHHHHHHHHHH-HTCCCCHHHHHHHHHHHTTS
T ss_pred CCCCCeEEEEECCCCCCHHHHHHHHHHHhCCcEEehhHHHHHHHHcCChHHHHHHHHHH-cCCcccHHHHHHHHHHHHhc
Confidence 3456789999999999999999999999999999999998773 2334555554 46666777666666554321
Q ss_pred ---CCEEEEcCCCCCcccCcHHHH----HHHh-----cCcEEEEEcChhhhchhh
Q 019172 256 ---VRAVVATLGGQQGAAARADKW----QHLY-----AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 256 ---~~~VIAtGGG~~~avlr~~~r----~~L~-----~G~VV~Ld~s~a~~~~~R 298 (345)
.+.||..|. ......+ +.+. .+.+|||++|+++. ..|
T Consensus 95 ~~~~~~vIldg~-----~~~~~~~~~l~~~l~~~~~~~~~vi~l~~~~e~~-~~R 143 (201)
T 2cdn_A 95 PDAANGFILDGY-----PRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVL-LER 143 (201)
T ss_dssp GGGTTCEEEESC-----CCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH-HHH
T ss_pred ccCCCeEEEECC-----CCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHH-HHH
Confidence 223443332 1222222 2343 24799999998865 444
No 29
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=99.28 E-value=2e-12 Score=118.53 Aligned_cols=101 Identities=11% Similarity=0.064 Sum_probs=67.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH--cCchhhhhhccChH------------------------
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA--KQTIDSWMLAEGSD------------------------ 239 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~--g~sI~ei~~~~Gee------------------------ 239 (345)
.+.|.|.|++||||||||+.||+.||++|+|.|.+.+... |++.. .+...++.
T Consensus 14 ~~iI~i~g~~gsGk~~i~~~la~~lg~~~~d~~~~~~~a~~~g~~~~-~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (223)
T 3hdt_A 14 NLIITIEREYGSGGRIVGKKLAEELGIHFYDDDILKLASEKSAVGEQ-FFRLADEKAGNNLLYRLGGGRKIDLHSKPSPN 92 (223)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHTCEEECHHHHHHHHHCC--------------------------------------
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHcCCcEEcHHHHHHHHHHcCCCHH-HHHHHHhhccccHHHHHhcccccccccccccc
Confidence 4579999999999999999999999999999766544332 44432 33333322
Q ss_pred -------HHHHHHHHHHHHHhcCCCEEEE-cCCCCCcccCc--HHHHHHHhcCcEEEEEcChhhh
Q 019172 240 -------SVVNGECDVLESLSSHVRAVVA-TLGGQQGAAAR--ADKWQHLYAGFTVWLSQTEAMG 294 (345)
Q Consensus 240 -------~FRelE~~vL~~L~~~~~~VIA-tGGG~~~avlr--~~~r~~L~~G~VV~Ld~s~a~~ 294 (345)
.....+.++++++....++||+ +||| ++++ +++ .++.+|||++|.+..
T Consensus 93 ~~~~~~~~~f~~~~~~i~~la~~~~~Vi~Grggg---~vl~~~~~~----~~~~~VfL~A~~e~r 150 (223)
T 3hdt_A 93 DKLTSPENLFKFQSEVMRELAESEPCIFVGRAAG---YVLDQDEDI----ERLIRIFVYTDKVKK 150 (223)
T ss_dssp -----HHHHHHHHHHHHHHHHHHSCEEEESTTHH---HHHHHCTTC----CEEEEEEEECCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHhCCCEEEEeCCcc---hhcccccCC----CCeEEEEEECCHHHH
Confidence 2235677888888877788887 8776 3453 222 247899999998855
No 30
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=99.27 E-value=1.6e-11 Score=105.10 Aligned_cols=104 Identities=12% Similarity=0.067 Sum_probs=65.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHH-------HHHHhcCCC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDV-------LESLSSHVR 257 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~v-------L~~L~~~~~ 257 (345)
.++.|+|+|++||||||+|+.||+.||++++|.|.+.+...+. + ...++++++.++... ++.+...+.
T Consensus 4 ~~~~I~l~G~~GsGKST~~~~L~~~l~~~~i~~D~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 78 (193)
T 2rhm_A 4 TPALIIVTGHPATGKTTLSQALATGLRLPLLSKDAFKEVMFDG-L----GWSDREWSRRVGATAIMMLYHTAATILQSGQ 78 (193)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHTCCEEEHHHHHHHHHHH-H----CCCSHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHcCCeEecHHHHHHHHHHh-c----CccchHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999999999999999999998776542 1 223445555554321 223232334
Q ss_pred EEEEcCCCCCcccCcHHHHHH--Hh-cC----cEEEEEcChhhhchhh
Q 019172 258 AVVATLGGQQGAAARADKWQH--LY-AG----FTVWLSQTEAMGKLLR 298 (345)
Q Consensus 258 ~VIAtGGG~~~avlr~~~r~~--L~-~G----~VV~Ld~s~a~~~~~R 298 (345)
.||..+.. ......+.+ |. .+ .+|||++|+++. ..|
T Consensus 79 ~vi~d~~~----~~~~~~~~~~~l~~~~~~~~~~v~l~~~~e~~-~~R 121 (193)
T 2rhm_A 79 SLIMESNF----RVDLDTERMQNLHTIAPFTPIQIRCVASGDVL-VER 121 (193)
T ss_dssp CEEEEECC----CHHHHHHHHHHHHHHSCCEEEEEEEECCHHHH-HHH
T ss_pred eEEEecCC----CCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHH-HHH
Confidence 45544431 011111222 44 33 699999998865 444
No 31
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=99.27 E-value=9e-12 Score=106.11 Aligned_cols=105 Identities=10% Similarity=0.031 Sum_probs=68.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcHHHHHHH---cC--chhhhhhccChHHHHHHHHHH---HHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKELLETFA---KQ--TIDSWMLAEGSDSVVNGECDV---LES 251 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~lIE~~~---g~--sI~ei~~~~Gee~FRelE~~v---L~~ 251 (345)
+++.|+|+|++||||||+++.||+.|| ++++++|+++.+.. |. +..++.. ...+.++..+..+ +..
T Consensus 2 ~~~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~~i~~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 80 (192)
T 1kht_A 2 KNKVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRK-MDPETQKRIQKMAGRKIAE 80 (192)
T ss_dssp -CCEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEEHHHHHHHHHHHTTSCSSGGGGSS-CCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhcCcceEEEehHHHHHHHHhccCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999 99999999876543 33 3444432 2344555555433 333
Q ss_pred HhcCCCEEEEcCCCCCcccCcHHHH------HHH---hcCcEEEEEcChhhh
Q 019172 252 LSSHVRAVVATLGGQQGAAARADKW------QHL---YAGFTVWLSQTEAMG 294 (345)
Q Consensus 252 L~~~~~~VIAtGGG~~~avlr~~~r------~~L---~~G~VV~Ld~s~a~~ 294 (345)
+.... .||.+|++ +..+...+ ..+ ..+.+|||++|+++.
T Consensus 81 ~~~~~-~viid~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~ 128 (192)
T 1kht_A 81 MAKES-PVAVDTHS---TVSTPKGYLPGLPSWVLNELNPDLIIVVETTGDEI 128 (192)
T ss_dssp HHTTS-CEEEECCS---EEEETTEEEESSCHHHHHHHCCSEEEEEECCHHHH
T ss_pred hccCC-eEEEccce---eccccccccccCcHHHHhccCCCEEEEEeCCHHHH
Confidence 44434 45556665 22222111 223 247799999999866
No 32
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=99.27 E-value=4.4e-13 Score=116.54 Aligned_cols=42 Identities=21% Similarity=0.293 Sum_probs=38.4
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHh-hCCceeeCcHHHHHH
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVG-LGYTPLSTKELLETF 224 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~-Lg~~fID~D~lIE~~ 224 (345)
..+++.|+|+|++||||||+|+.||+. +|++++|+|+++++.
T Consensus 7 ~~~~~~I~l~G~~GsGKSTv~~~La~~l~g~~~id~d~~~~~~ 49 (184)
T 1y63_A 7 QPKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKEN 49 (184)
T ss_dssp CCSSCEEEEECSTTSSHHHHHHHHHHHSTTEEEEEHHHHHHHT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHhcCCCEEeeHHHHHHHh
Confidence 345789999999999999999999999 899999999998874
No 33
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=99.26 E-value=1.2e-11 Score=113.78 Aligned_cols=97 Identities=11% Similarity=0.015 Sum_probs=74.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh---hCCcee--eCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEE
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG---LGYTPL--STKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVV 260 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~---Lg~~fI--D~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VI 260 (345)
++.|+|+|++||||||+|+.|++. +|++++ |.|.+.+...+ +...++..|+..+...++.+... ..||
T Consensus 4 ~~lIvl~G~pGSGKSTla~~La~~L~~~g~~~i~~~~D~~~~~l~~------~~~~~e~~~~~~~~~~i~~~l~~-~~vI 76 (260)
T 3a4m_A 4 IMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPV------WKEKYEEFIKKSTYRLIDSALKN-YWVI 76 (260)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEECTHHHHTTSSS------CCGGGHHHHHHHHHHHHHHHHTT-SEEE
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHHHhCCCEEEEECchHHHHHHhh------hhHHHHHHHHHHHHHHHHHHhhC-CEEE
Confidence 567999999999999999999998 899998 99988765443 34557888999888887776665 5566
Q ss_pred EcCCCCCcccCcHHHHHHHh-----c---CcEEEEEcChhhh
Q 019172 261 ATLGGQQGAAARADKWQHLY-----A---GFTVWLSQTEAMG 294 (345)
Q Consensus 261 AtGGG~~~avlr~~~r~~L~-----~---G~VV~Ld~s~a~~ 294 (345)
..+. .....+++.+. . ..+|||++|+++.
T Consensus 77 iD~~-----~~~~~~~~~l~~~a~~~~~~~~vi~l~~~~e~~ 113 (260)
T 3a4m_A 77 VDDT-----NYYNSMRRDLINIAKKYNKNYAIIYLKASLDVL 113 (260)
T ss_dssp ECSC-----CCSHHHHHHHHHHHHHTTCEEEEEEEECCHHHH
T ss_pred EeCC-----cccHHHHHHHHHHHHHcCCCEEEEEEeCCHHHH
Confidence 5553 35566666554 1 4699999998765
No 34
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=99.25 E-value=2.7e-12 Score=109.30 Aligned_cols=106 Identities=15% Similarity=0.037 Sum_probs=62.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCcee-eCcHHHHHHHcCchhhhhhccChHHHHH------HHHHHHHHHhc-CC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPL-STKELLETFAKQTIDSWMLAEGSDSVVN------GECDVLESLSS-HV 256 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fI-D~D~lIE~~~g~sI~ei~~~~Gee~FRe------lE~~vL~~L~~-~~ 256 (345)
+++.|+|+|++||||||+|+.||+.||++++ |.| ..|..+.+++. +|++.|+. ...++++.+.. ..
T Consensus 4 ~~~~I~l~G~~GsGKST~a~~La~~l~~~~i~d~~-----~~g~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~l~~~g 77 (183)
T 2vli_A 4 RSPIIWINGPFGVGKTHTAHTLHERLPGSFVFEPE-----EMGQALRKLTP-GFSGDPQEHPMWIPLMLDALQYASREAA 77 (183)
T ss_dssp -CCEEEEECCC----CHHHHHHHHHSTTCEECCTH-----HHHHHHHHTST-TCCSCGGGSTTHHHHHHHHHHHHHHHCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcCCCEEEchh-----hhHHHHHHhCc-cccchhhhhHHHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999999999 543 23445555555 45544432 22344555443 24
Q ss_pred CEEEEcCCCCCcccCcHHHHHHHh-cCcE---EEEEcChhhhchhh
Q 019172 257 RAVVATLGGQQGAAARADKWQHLY-AGFT---VWLSQTEAMGKLLR 298 (345)
Q Consensus 257 ~~VIAtGGG~~~avlr~~~r~~L~-~G~V---V~Ld~s~a~~~~~R 298 (345)
..||..+.-. .....++.++.++ .|.+ |||++++++. ..|
T Consensus 78 ~~vi~d~~~~-~~~~~~~~~~~l~~~~~~~~~i~l~~~~e~~-~~R 121 (183)
T 2vli_A 78 GPLIVPVSIS-DTARHRRLMSGLKDRGLSVHHFTLIAPLNVV-LER 121 (183)
T ss_dssp SCEEEEECCC-CHHHHHHHHHHHHHTTCCCEEEEEECCHHHH-HHH
T ss_pred CcEEEeeecc-CHHHHHHHHHHHHhcCCceEEEEEeCCHHHH-HHH
Confidence 5555443310 0013344555665 5655 9999998865 344
No 35
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=99.24 E-value=2.4e-11 Score=109.30 Aligned_cols=109 Identities=14% Similarity=0.090 Sum_probs=74.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHHHhcC---
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLESLSSH--- 255 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~--- 255 (345)
.++.|+|+|++||||||+|+.||+.||++++++|+++++. .|..+.+++. .|+..+++.+.+++......
T Consensus 15 ~~~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~li~~~~~~~~~~g~~i~~~~~-~g~~~~~~~~~~~i~~~l~~~~~ 93 (233)
T 1ak2_A 15 KGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMD-AGKLVSDEMVLELIEKNLETPPC 93 (233)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHHHTCHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHTSGGG
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCceecHHHHHHHHHHcCChhHHHHHHHHH-CCCcCCHHHHHHHHHHHHhcccc
Confidence 5678999999999999999999999999999999998874 3445666664 46666677777666654332
Q ss_pred CCEEEEcCCCCCcccCcHHHHH----HHh-----cCcEEEEEcChhhhchhhhh
Q 019172 256 VRAVVATLGGQQGAAARADKWQ----HLY-----AGFTVWLSQTEAMGKLLRVF 300 (345)
Q Consensus 256 ~~~VIAtGGG~~~avlr~~~r~----~L~-----~G~VV~Ld~s~a~~~~~Rv~ 300 (345)
.+.||..|- +......+ ++. .+.+|||+++.++. ..|..
T Consensus 94 ~~g~ildg~-----~~~~~~~~~l~~~l~~~~~~~d~vi~L~~~~e~~-~~Rl~ 141 (233)
T 1ak2_A 94 KNGFLLDGF-----PRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLL-IRRIT 141 (233)
T ss_dssp TTCEEEESC-----CCSHHHHHHHHHHHHHHTCCCCEEEEEECCHHHH-HHHHH
T ss_pred cCcEEEeCC-----CCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHHH
Confidence 123444442 12222122 232 25799999999876 55543
No 36
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=99.22 E-value=5.3e-12 Score=110.05 Aligned_cols=54 Identities=20% Similarity=0.206 Sum_probs=42.7
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH---cCchhhhhhccChHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA---KQTIDSWMLAEGSDSV 241 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~---g~sI~ei~~~~Gee~F 241 (345)
+.|.|+|++||||||+++.||+ +|++++|+|+++++.. +..+.++++..|++.|
T Consensus 2 ~~i~i~G~~GsGKSTl~~~L~~-~g~~~i~~d~~~~~~~~~~~~~~~~i~~~~g~~~~ 58 (204)
T 2if2_A 2 KRIGLTGNIGCGKSTVAQMFRE-LGAYVLDADKLIHSFYRKGHPVYEEVVKTFGKGIL 58 (204)
T ss_dssp CEEEEEECTTSSHHHHHHHHHH-TTCEEEEHHHHHHGGGSSSSHHHHHHHHHHCTTTT
T ss_pred eEEEEECCCCcCHHHHHHHHHH-CCCEEEEccHHHHHHhcCCHHHHHHHHHHhCHHhh
Confidence 4799999999999999999999 9999999999988655 2345555555554433
No 37
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=99.19 E-value=8.6e-11 Score=103.43 Aligned_cols=121 Identities=10% Similarity=0.065 Sum_probs=72.7
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH------cCchhhhhhccChHHHHHHHHHHHHH-Hhc---CC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA------KQTIDSWMLAEGSDSVVNGECDVLES-LSS---HV 256 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~------g~sI~ei~~~~Gee~FRelE~~vL~~-L~~---~~ 256 (345)
|+|+|+|++||||||+++.||+.+|++++|+|+++.+.. |..+.+++.. |.....+....++.+ +.. ..
T Consensus 1 m~I~l~G~~GsGKsT~a~~L~~~~~~~~i~~d~~~r~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~l~~~~~~~ 79 (216)
T 3dl0_A 1 MNLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDK-GELVPDEVTIGIVKERLGKDDCER 79 (216)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSSCCEEEHHHHHHHHHHTTCHHHHHHHHHHTT-TCCCCHHHHHHHHHHHHTSGGGTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCcEEeHHHHHHHHHhcCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHhcccccC
Confidence 579999999999999999999999999999999988743 2334444432 322222222233222 322 23
Q ss_pred CEEEEcCCCCCcccCcHHHHHHHh---------cCcEEEEEcChhhhchhhhhhhcccccccccccee
Q 019172 257 RAVVATLGGQQGAAARADKWQHLY---------AGFTVWLSQTEAMGKLLRVFVLSLHLRSVTSYFVR 315 (345)
Q Consensus 257 ~~VIAtGGG~~~avlr~~~r~~L~---------~G~VV~Ld~s~a~~~~~Rv~v~~~h~R~~~~~~~~ 315 (345)
++|+ .|- +........+. -..+|||++|.++. ..|..-++.|.-....|+..
T Consensus 80 ~~il-dg~-----p~~~~~~~~~~~~~~~~~~~~d~vi~l~~~~e~~-~~Rl~~R~~~~~~g~~y~~~ 140 (216)
T 3dl0_A 80 GFLL-DGF-----PRTVAQAEALEEILEEMGKPIDYVINIQVDKDVL-MERLTGRRICSVCGTTYHLV 140 (216)
T ss_dssp CEEE-ESC-----CCSHHHHHHHHHHHHHTTCCCSEEEEEECCGGGH-HHHHHTEEEETTTCCEEETT
T ss_pred CEEE-eCC-----CCCHHHHHHHHHHHHHcCCCCCEEEEEECCHHHH-HHHHHCCCcCCccCCccccc
Confidence 3444 332 33333333332 14699999999866 55644444444444444433
No 38
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=99.19 E-value=4.6e-11 Score=105.64 Aligned_cols=141 Identities=11% Similarity=0.067 Sum_probs=86.9
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhC------CceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCC
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLG------YTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHV 256 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg------~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~ 256 (345)
...++.|+|+|++||||||+++.|++.|+ +.++|.|.+.+...+ .. .++...+++.|+.++.. +..+...+
T Consensus 22 ~~~~~~i~~~G~~GsGKsT~~~~l~~~l~~~~g~~~~~~~~d~~r~~l~~-~~-~~~~~~r~~~~~~~~~~-~~~~l~~g 98 (211)
T 1m7g_A 22 NQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNK-DL-GFSEADRNENIRRIAEV-AKLFADSN 98 (211)
T ss_dssp TSSCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTTTTTT-TC-CSSHHHHHHHHHHHHHH-HHHHHHTT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHhccccCCcEEEECChHHhhhhcc-cc-CCCHHHHHHHHHHHHHH-HHHHHHCC
Confidence 34578899999999999999999999987 888888877543221 11 13335567777776643 44444445
Q ss_pred CEEEEcCCCCCcccCcHHHHHHHhc--------------CcEEEEEcChhhhchhhh------hhhccccc---cccccc
Q 019172 257 RAVVATLGGQQGAAARADKWQHLYA--------------GFTVWLSQTEAMGKLLRV------FVLSLHLR---SVTSYF 313 (345)
Q Consensus 257 ~~VIAtGGG~~~avlr~~~r~~L~~--------------G~VV~Ld~s~a~~~~~Rv------~v~~~h~R---~~~~~~ 313 (345)
..||+++. .....+++.++. ..+|||++|+++. ..|. ..+..+.. .+..++
T Consensus 99 ~~VI~d~~-----~~~~~~~~~l~~l~~~~~~~~~~~~p~~vi~Ld~~~e~~-~~R~~r~~~~~~r~~~~~~~~~~~~~y 172 (211)
T 1m7g_A 99 SIAITSFI-----SPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVEVA-EQRDPKGLYKKAREGVIKEFTGISAPY 172 (211)
T ss_dssp CEEEEECC-----CCCHHHHHHHHHHHHCCCTTCSCCCCEEEEEEECCHHHH-HTSCTTCHHHHHHHTSSSSCBTTTBCC
T ss_pred CEEEEecC-----CccHHHHHHHHHHhhhcccccccCCCeEEEEEeCCHHHH-HHhhhHHHHHHHHhcchhhhhhhhhhc
Confidence 67777633 233345555531 4699999999876 4441 11111111 122222
Q ss_pred e---eeeeeccCCC-ChHHHhhh
Q 019172 314 V---RLEFVSSFSR-TNEHIMAR 332 (345)
Q Consensus 314 ~---~le~i~~~~r-~~~~~~~~ 332 (345)
. ...++.|-+. +.|++..+
T Consensus 173 ~~~~~~~~~IDt~~~s~eev~~~ 195 (211)
T 1m7g_A 173 EAPANPEVHVKNYELPVQDAVKQ 195 (211)
T ss_dssp CCCSSCSEEEECSSSCHHHHHHH
T ss_pred cCCCCCeEEEECCCCCHHHHHHH
Confidence 2 3346678887 88888664
No 39
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=99.19 E-value=4.6e-11 Score=109.21 Aligned_cols=116 Identities=13% Similarity=0.062 Sum_probs=76.5
Q ss_pred HHHHHHhhhhhcCCceEEEEcCCCCChHHHHHHHHHhhC--CceeeCcHH---------HHHHHcCchhhhhhccChHHH
Q 019172 173 WESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLG--YTPLSTKEL---------LETFAKQTIDSWMLAEGSDSV 241 (345)
Q Consensus 173 ~~~l~a~~~~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg--~~fID~D~l---------IE~~~g~sI~ei~~~~Gee~F 241 (345)
|+.+..+......++.|+|+|+|||||||+|+.|++.++ +.++|.|.+ +.+..|+.+.++++. .+
T Consensus 19 ~~~~~~~~~~~~~~~~i~l~G~~GsGKSTla~~L~~~l~~~~~~~~~D~~r~~~~~~~~i~~~~g~~~~~~~~~----~~ 94 (253)
T 2p5t_B 19 LRSLTRGKKSSKQPIAILLGGQSGAGKTTIHRIKQKEFQGNIVIIDGDSFRSQHPHYLELQQEYGKDSVEYTKD----FA 94 (253)
T ss_dssp HHHHHTTCCCCSSCEEEEEESCGGGTTHHHHHHHHHHTTTCCEEECGGGGGTTSTTHHHHHTTCSSTTHHHHHH----HH
T ss_pred HHHHHccCCcccCCeEEEEECCCCCCHHHHHHHHHHhcCCCcEEEecHHHHHhchhHHHHHHHcCchHHHHhhH----HH
Confidence 333333333334567899999999999999999999997 678899997 444456666555432 24
Q ss_pred HHHHHHHHHHHhcC-CCEEEEcCCCCCcccCcHHHHHHHh-cCc---EEEEEcChhhh
Q 019172 242 VNGECDVLESLSSH-VRAVVATLGGQQGAAARADKWQHLY-AGF---TVWLSQTEAMG 294 (345)
Q Consensus 242 RelE~~vL~~L~~~-~~~VIAtGGG~~~avlr~~~r~~L~-~G~---VV~Ld~s~a~~ 294 (345)
+++...+++.+... .++||.++++. ...+..+++.++ .|. +|||+++.++.
T Consensus 95 ~~~~~~~~~~~~~~g~~vVid~~~~~--~~~~~~~~~~l~~~g~~v~lv~l~~~~e~~ 150 (253)
T 2p5t_B 95 GKMVESLVTKLSSLGYNLLIEGTLRT--VDVPKKTAQLLKNKGYEVQLALIATKPELS 150 (253)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTS--SHHHHHHHHHHHHTTCEEEEEEECCCHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCC--HHHHHHHHHHHHHCCCcEEEEEEeCCHHHH
Confidence 45556666666554 46777765542 234566677776 575 45668877754
No 40
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=99.18 E-value=5e-11 Score=105.45 Aligned_cols=106 Identities=12% Similarity=0.095 Sum_probs=67.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHH-HhcC--CC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLES-LSSH--VR 257 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~-L~~~--~~ 257 (345)
|+|+|+|++||||||+|+.||+.+|++++++|+++.+. .|..+.+++.. |.....+....++.. +... ..
T Consensus 1 m~I~l~G~~GsGKsT~a~~L~~~~g~~~i~~d~~~r~~~~~~~~~g~~i~~~~~~-g~~~~~~~~~~~i~~~l~~~~~~~ 79 (214)
T 1e4v_A 1 MRIILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDA-GKLVTDELVIALVKERIAQEDCRN 79 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHHHHTCTTTGGGHHHHHH-TCCCCHHHHHHHHHHHHTSGGGGG
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCeEEeHHHHHHHHHHcCChHHHHHHHHHHC-CCcCCHHHHHHHHHHHHhccccCC
Confidence 47999999999999999999999999999999999874 24445555543 322112222233332 2221 12
Q ss_pred EEEEcCCCCCcccCcHHHHHHHh-c----CcEEEEEcChhhhchhhh
Q 019172 258 AVVATLGGQQGAAARADKWQHLY-A----GFTVWLSQTEAMGKLLRV 299 (345)
Q Consensus 258 ~VIAtGGG~~~avlr~~~r~~L~-~----G~VV~Ld~s~a~~~~~Rv 299 (345)
.||..|- +........|. . +.+|||+++.++. ..|.
T Consensus 80 ~~i~dg~-----~~~~~~~~~l~~~~~~~d~vi~l~~~~e~~-~~R~ 120 (214)
T 1e4v_A 80 GFLLDGF-----PRTIPQADAMKEAGINVDYVLEFDVPDELI-VDRI 120 (214)
T ss_dssp CEEEESC-----CCSHHHHHHHHHTTCCCSEEEEEECCHHHH-HHHH
T ss_pred CEEEeCC-----CCCHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHH
Confidence 3554553 23334444453 2 4799999999866 4553
No 41
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=99.18 E-value=2.6e-11 Score=103.87 Aligned_cols=94 Identities=15% Similarity=0.059 Sum_probs=62.5
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHH--HHHH---HHHHhcCCCE
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNG--ECDV---LESLSSHVRA 258 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRel--E~~v---L~~L~~~~~~ 258 (345)
..++.|+|+|++||||||+++.||+.+|++++|+|+++++. .++...|+..|+.. +..+ ++.+....+.
T Consensus 9 ~~~~~i~i~G~~GsGKst~~~~l~~~~~~~~~~~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 82 (180)
T 3iij_A 9 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE------QLYDGYDEEYDCPILDEDRVVDELDNQMREGGV 82 (180)
T ss_dssp CCCCCEEEECSTTSSHHHHHHHHHHHHCCEEEEHHHHHHHH------TCEEEEETTTTEEEECHHHHHHHHHHHHHHCCE
T ss_pred ccCCeEEEEeCCCCCHHHHHHHHHHHhCCeEEEHHHHHhhc------chhhhhhhhhcCccCChHHHHHHHHHHHhcCCE
Confidence 35678999999999999999999999999999999998876 23333344433321 1112 2222222445
Q ss_pred EEEcCCCCCcccCcHHHHHHHh---cCcEEEEEcChhhh
Q 019172 259 VVATLGGQQGAAARADKWQHLY---AGFTVWLSQTEAMG 294 (345)
Q Consensus 259 VIAtGGG~~~avlr~~~r~~L~---~G~VV~Ld~s~a~~ 294 (345)
||...+ +..+. .+.+|||+++.++.
T Consensus 83 vv~~~~-----------~~~~~~~~~~~vi~L~~~~e~l 110 (180)
T 3iij_A 83 IVDYHG-----------CDFFPERWFHIVFVLRTDTNVL 110 (180)
T ss_dssp EEECSC-----------CTTSCGGGCSEEEEEECCHHHH
T ss_pred EEEech-----------hhhcchhcCCEEEEEECCHHHH
Confidence 554332 12222 57899999999865
No 42
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=99.18 E-value=2e-10 Score=100.70 Aligned_cols=106 Identities=15% Similarity=0.178 Sum_probs=66.0
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh---CCc--eeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCE
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL---GYT--PLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRA 258 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L---g~~--fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~ 258 (345)
.++..|+|+|++||||||+++.||..| |.. ++|+|++...... .+. +..+...+.++... .+...+......
T Consensus 23 ~~g~~i~l~G~sGsGKSTl~~~La~~l~~~G~~~~~~d~d~~~~~~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~ 99 (200)
T 3uie_A 23 QKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCYILDGDNVRHGLNR-DLS-FKAEDRAENIRRVG-EVAKLFADAGII 99 (200)
T ss_dssp SCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHTTTTTT-TCC-SSHHHHHHHHHHHH-HHHHHHHHTTCE
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCceEEEecCchhhhHhhc-ccC-cChHHHHHHHHHHH-HHHHHHHhCCce
Confidence 357889999999999999999999999 666 9999987542211 111 11111122233322 333444444556
Q ss_pred EEEcCCCCCcccCcHHHHHHHhc----C--cEEEEEcChhhhchhh
Q 019172 259 VVATLGGQQGAAARADKWQHLYA----G--FTVWLSQTEAMGKLLR 298 (345)
Q Consensus 259 VIAtGGG~~~avlr~~~r~~L~~----G--~VV~Ld~s~a~~~~~R 298 (345)
||+++++ ..++.|+.++. . .+|||+++.++. ..|
T Consensus 100 vi~~~~~-----~~~~~r~~~~~~~~~~~~~~v~L~a~~e~~-~~R 139 (200)
T 3uie_A 100 CIASLIS-----PYRTDRDACRSLLPEGDFVEVFMDVPLSVC-EAR 139 (200)
T ss_dssp EEEECCC-----CCHHHHHHHHHTSCTTSEEEEEECCCHHHH-HHH
T ss_pred EEEecCC-----chHHHHHHHHHhcCCCCEEEEEEeCCHHHH-HHh
Confidence 6655543 45666776652 1 469999999866 444
No 43
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=99.18 E-value=5.8e-11 Score=104.30 Aligned_cols=120 Identities=12% Similarity=0.045 Sum_probs=72.4
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH------cCchhhhhhccChHHHHHHHHHHHHH-Hh---cCC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA------KQTIDSWMLAEGSDSVVNGECDVLES-LS---SHV 256 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~------g~sI~ei~~~~Gee~FRelE~~vL~~-L~---~~~ 256 (345)
|+|+|+|++||||||+|+.||+.+|++++|+|+++.+.. |..+.+++.. |.....+....++.+ +. ...
T Consensus 1 m~I~l~G~~GsGKsT~a~~L~~~~~~~~i~~d~~~r~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~l~~~~~~~ 79 (216)
T 3fb4_A 1 MNIVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFRAAIKNGTELGLKAKSFMDQ-GNLVPDEVTIGIVHERLSKDDCQK 79 (216)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHHHTTCHHHHHHHHHHHH-TCCCCHHHHHHHHHHHHTSGGGTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCcEeeHHHHHHHHHhcCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHhcccCCC
Confidence 579999999999999999999999999999999988743 2234444432 322222333333333 22 223
Q ss_pred CEEEEcCCCCCcccCcHHHHHHHh---------cCcEEEEEcChhhhchhhhhhhccccccccccce
Q 019172 257 RAVVATLGGQQGAAARADKWQHLY---------AGFTVWLSQTEAMGKLLRVFVLSLHLRSVTSYFV 314 (345)
Q Consensus 257 ~~VIAtGGG~~~avlr~~~r~~L~---------~G~VV~Ld~s~a~~~~~Rv~v~~~h~R~~~~~~~ 314 (345)
.+|+ .|- +........+. -+.+|||++|.++. ..|..-++.|......|+.
T Consensus 80 ~~il-dg~-----p~~~~~~~~l~~~~~~~~~~~d~vi~l~~~~e~~-~~Rl~~R~~~~~~g~~y~~ 139 (216)
T 3fb4_A 80 GFLL-DGF-----PRTVAQADALDSLLTDLGKKLDYVLNIKVEQEEL-MKRLTGRWICKTCGATYHT 139 (216)
T ss_dssp CEEE-ESC-----CCSHHHHHHHHHHHHHTTCCCSEEEEEECCHHHH-HHHHHSEEEETTTCCEEET
T ss_pred cEEE-eCC-----CCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHHHcCCCCCccCCcccc
Confidence 3444 442 34443333332 24799999999865 5554444444444444443
No 44
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=99.18 E-value=5.3e-11 Score=106.73 Aligned_cols=106 Identities=7% Similarity=0.004 Sum_probs=70.0
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHHHhcC--CCE
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLESLSSH--VRA 258 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~--~~~ 258 (345)
+.|+|+|++||||||+++.||+.||++++++|+++.+. .|..+.+++. .|+..+++....++...... ...
T Consensus 1 m~I~l~G~~GsGKsT~a~~La~~lg~~~i~~dd~~r~~~~~~~~~g~~i~~~~~-~g~~~~~~~~~~~i~~~l~~~~g~~ 79 (223)
T 2xb4_A 1 MNILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFID-RGDLVPDDITIPMVLETLESKGKDG 79 (223)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTCEEEEHHHHHHHHTTTTCHHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHCTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCeEEchHHHHHHHHHcCCHHHHHHHHHHH-cCCcCcHHHHHHHHHHHHhcccCCe
Confidence 46999999999999999999999999999999998875 2344555554 45544555555555443322 334
Q ss_pred EEEcCCCCCcccCcHHHHHHH----h-c----CcEEEEEcChhhhchhhh
Q 019172 259 VVATLGGQQGAAARADKWQHL----Y-A----GFTVWLSQTEAMGKLLRV 299 (345)
Q Consensus 259 VIAtGGG~~~avlr~~~r~~L----~-~----G~VV~Ld~s~a~~~~~Rv 299 (345)
||..|- +......+.| . . ..+|||++|+++. ..|.
T Consensus 80 vIlDg~-----~~~~~~~~~l~~~~~~~~~~~d~vi~l~~~~e~~-~~Rl 123 (223)
T 2xb4_A 80 WLLDGF-----PRNTVQAQKLFEALQEKGMKINFVIEILLPREVA-KNRI 123 (223)
T ss_dssp EEEESC-----CCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH-HHHH
T ss_pred EEEeCC-----cCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHH
Confidence 554443 2322223333 2 2 3799999999865 4553
No 45
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=99.15 E-value=2.2e-11 Score=105.05 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=37.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH-cCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA-KQT 228 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~-g~s 228 (345)
+.+.|.|+|++||||||+|+.||+. |++++|+|+++++.. |.+
T Consensus 7 ~~~~I~i~G~~GsGKST~~~~La~~-g~~~id~d~~~~~~~~~~~ 50 (203)
T 1uf9_A 7 HPIIIGITGNIGSGKSTVAALLRSW-GYPVLDLDALAARARENKE 50 (203)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHHT-TCCEEEHHHHHHHHHHHTH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHC-CCEEEcccHHHHHhcCChH
Confidence 3567999999999999999999999 999999999987766 543
No 46
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=99.12 E-value=3.7e-10 Score=94.56 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=61.0
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEc----
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVAT---- 262 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAt---- 262 (345)
+.|+|+|++||||||+|+.||+.+|++++|.|.+.+... .+..+ |. ..+.+..+. .||+.
T Consensus 2 ~~i~l~G~~GsGKsT~~~~L~~~l~~~~i~~d~~~~~~~--~~~~~--------~~-----~~~~l~~~~-~vi~dr~~~ 65 (173)
T 3kb2_A 2 TLIILEGPDCCFKSTVAAKLSKELKYPIIKGSSFELAKS--GNEKL--------FE-----HFNKLADED-NVIIDRFVY 65 (173)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHCCCEEECCCHHHHTT--CHHHH--------HH-----HHHHHTTCC-SEEEESCHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCeeecCcccccchh--HHHHH--------HH-----HHHHHHhCC-CeEEeeeec
Confidence 468999999999999999999999999999999876533 11222 21 112233322 23321
Q ss_pred ------CCCCCcccCcHHHHHHHh-----cCcEEEEEcChhhhchhh
Q 019172 263 ------LGGQQGAAARADKWQHLY-----AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 263 ------GGG~~~avlr~~~r~~L~-----~G~VV~Ld~s~a~~~~~R 298 (345)
++|.....+...++..+. .+.+|||++++++. ..|
T Consensus 66 ~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~~~~e~~-~~R 111 (173)
T 3kb2_A 66 SNLVYAKKFKDYSILTERQLRFIEDKIKAKAKVVYLHADPSVI-KKR 111 (173)
T ss_dssp HHHHHTTTBTTCCCCCHHHHHHHHHHHTTTEEEEEEECCHHHH-HHH
T ss_pred chHHHHHHHHHhhHhhHHHHHHHhccCCCCCEEEEEeCCHHHH-HHH
Confidence 000000146677777665 35799999998865 444
No 47
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=99.11 E-value=1.4e-10 Score=118.09 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=72.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCcee-----eCcHHHHHHHcC-chhhhhhccChHHHHHHHHHHHHHH------h
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPL-----STKELLETFAKQ-TIDSWMLAEGSDSVVNGECDVLESL------S 253 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fI-----D~D~lIE~~~g~-sI~ei~~~~Gee~FRelE~~vL~~L------~ 253 (345)
+..|+|+|+|||||||+|+.||+.|++.++ +.|+++++..|. .+.++|...+++.|+..|..++..+ +
T Consensus 35 ~~lIvlvGlpGSGKSTia~~La~~L~~~~~d~~v~s~D~~r~~~~~~~~~~~~f~~~~~~~~~~re~~~~~~l~~~~~~L 114 (520)
T 2axn_A 35 PTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYL 114 (520)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHSCCCCGGGGCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHhhcCCCeEEecccHHHHHhccCCccccccCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 457999999999999999999999987775 559999888876 4678888889999987666543222 1
Q ss_pred --cCCCEEE--EcCCCCCcccCcHHHHHHHh-cCc-EEEEEcC
Q 019172 254 --SHVRAVV--ATLGGQQGAAARADKWQHLY-AGF-TVWLSQT 290 (345)
Q Consensus 254 --~~~~~VI--AtGGG~~~avlr~~~r~~L~-~G~-VV~Ld~s 290 (345)
.....|| +++++ ...+...++.++ .|. ++||...
T Consensus 115 ~~~~g~~VIvDat~~~---~~~R~~~~~~a~~~g~~v~~l~~~ 154 (520)
T 2axn_A 115 AKEGGQIAVFDATNTT---RERRHMILHFAKENDFKAFFIESV 154 (520)
T ss_dssp HHSCCCEEEEESCCCS---HHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred HhcCCceEEecCCCCC---HHHHHHHHHHHHHcCCeEEEEEEe
Confidence 3344555 45554 355666666665 464 6676653
No 48
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=99.11 E-value=1.2e-10 Score=99.30 Aligned_cols=107 Identities=15% Similarity=0.052 Sum_probs=63.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh---CCceeeCcHHHHHHHcCchhhhhhccChH------HHHHHHH-----HHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL---GYTPLSTKELLETFAKQTIDSWMLAEGSD------SVVNGEC-----DVLESL 252 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L---g~~fID~D~lIE~~~g~sI~ei~~~~Gee------~FRelE~-----~vL~~L 252 (345)
+.|+|+|++||||||+++.|++.| |++++++|+......|..+.+++.. |+- .|...++ +++..+
T Consensus 1 ~~I~l~G~~GsGKsT~~~~L~~~l~~~g~~~i~~d~~~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~~l~~~i~~~ 79 (195)
T 2pbr_A 1 MLIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILLT-EELDERTELLLFEASRSKLIEEKIIPD 79 (195)
T ss_dssp CEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEESSCSSHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCCchHHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999 9999999864322233334444432 321 1222221 122233
Q ss_pred hcCCCEEEEc----------CCCCCcccCcHHHHH----HHh----cCcEEEEEcChhhhchhh
Q 019172 253 SSHVRAVVAT----------LGGQQGAAARADKWQ----HLY----AGFTVWLSQTEAMGKLLR 298 (345)
Q Consensus 253 ~~~~~~VIAt----------GGG~~~avlr~~~r~----~L~----~G~VV~Ld~s~a~~~~~R 298 (345)
......||+. |++. ........ ++. .+.+|||++|+++. ..|
T Consensus 80 l~~~~~vi~dr~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~d~vi~l~~~~e~~-~~R 139 (195)
T 2pbr_A 80 LKRDKVVILDRFVLSTIAYQGYGK---GLDVEFIKNLNEFATRGVKPDITLLLDIPVDIA-LRR 139 (195)
T ss_dssp HHTTCEEEEESCHHHHHHHHTTTT---CCCHHHHHHHHHHHHTTCCCSEEEEEECCHHHH-HHH
T ss_pred HhCCCEEEECcchhHHHHHccccC---CCCHHHHHHHHHHhhcCCCCCEEEEEeCCHHHH-HHH
Confidence 3345567664 5442 23332222 222 36799999999865 444
No 49
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=99.11 E-value=8.2e-11 Score=102.83 Aligned_cols=55 Identities=11% Similarity=0.074 Sum_probs=42.9
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH---cCchhhhhhccChHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA---KQTIDSWMLAEGSDSVV 242 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~---g~sI~ei~~~~Gee~FR 242 (345)
+.|.|+|++||||||+++.||. +|++++|+|++..+.. +..+.++++..|++.|+
T Consensus 3 ~~i~l~G~~GsGKST~~~~La~-lg~~~id~d~~~~~~~~~~~~~~~~i~~~~g~~~~~ 60 (206)
T 1jjv_A 3 YIVGLTGGIGSGKTTIANLFTD-LGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQILT 60 (206)
T ss_dssp EEEEEECSTTSCHHHHHHHHHT-TTCCEEEHHHHHHHTTCSSCHHHHHHHHHHCTTCC-
T ss_pred cEEEEECCCCCCHHHHHHHHHH-CCCcccchHHHHHHHccCChHHHHHHHHHhCHHHhc
Confidence 3689999999999999999998 9999999999886643 23455666666665543
No 50
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=99.10 E-value=3.1e-11 Score=104.45 Aligned_cols=51 Identities=14% Similarity=0.153 Sum_probs=40.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh-CCceeeCcHHH-HHHHcCchhhhhhc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL-GYTPLSTKELL-ETFAKQTIDSWMLA 235 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L-g~~fID~D~lI-E~~~g~sI~ei~~~ 235 (345)
+++.|+|+|++||||||+++.||+.| |++++++++.. ....|..+.+++..
T Consensus 3 ~~~~I~l~G~~GsGKsT~~~~L~~~l~g~~~~~~~~~~~~~~~g~~i~~~~~~ 55 (204)
T 2v54_A 3 RGALIVFEGLDKSGKTTQCMNIMESIPANTIKYLNFPQRSTVTGKMIDDYLTR 55 (204)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHTSCGGGEEEEESSCTTSHHHHHHHHHHTS
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHCCCceEEEecCCCCCcHHHHHHHHHhc
Confidence 57889999999999999999999999 69999988654 33345556666654
No 51
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=99.10 E-value=1.5e-10 Score=106.56 Aligned_cols=98 Identities=8% Similarity=0.013 Sum_probs=66.6
Q ss_pred eEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCc--------------------hhhhhh-ccChHHHHHHHH
Q 019172 188 SIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQT--------------------IDSWML-AEGSDSVVNGEC 246 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~s--------------------I~ei~~-~~Gee~FRelE~ 246 (345)
.|+|+|++||||||+|+.||+.++++++++|++++. .|++ ..++.+ ..+...|++.+.
T Consensus 3 li~I~G~~GSGKSTla~~La~~~~~~~i~~D~~~~~-~~~~~~t~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 81 (253)
T 2ze6_A 3 LHLIYGPTCSGKTDMAIQIAQETGWPVVALDRVQCC-PQIATGSGRPLESELQSTRRIYLDSRPLTEGILDAESAHRRLI 81 (253)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCCEEECCSGGGC-GGGTTTTTCCCGGGGTTCCEECSCCCCGGGCSCCHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHhcCCCeEEeccHHhcc-CCCccccCCCCHHHHhCCCeEEEeeeccccccccHHHHHHHHH
Confidence 588999999999999999999999999999997632 1211 011122 356788988888
Q ss_pred HHHHHHhcCCCEEEEcCCCCCcccCcHHHHHHHhc-----C---cEEEEEcCh-hh
Q 019172 247 DVLESLSSHVRAVVATLGGQQGAAARADKWQHLYA-----G---FTVWLSQTE-AM 293 (345)
Q Consensus 247 ~vL~~L~~~~~~VIAtGGG~~~avlr~~~r~~L~~-----G---~VV~Ld~s~-a~ 293 (345)
..+ ++......||.+||+. . ..+..++. + .+|||+++. +.
T Consensus 82 ~~i-~~~~~g~~vIl~gg~~---~---~~~~~~~~~~~~~~~~~~~i~l~~~~~e~ 130 (253)
T 2ze6_A 82 FEV-DWRKSEEGLILEGGSI---S---LLNCMAKSPFWRSGFQWHVKRLRLGDSDA 130 (253)
T ss_dssp HHH-HTTTTSSEEEEEECCH---H---HHHHHHHCTTTTSSCEEEEEECCCCCHHH
T ss_pred HHH-HHHhCCCCeEEeccHH---H---HHHHHHhcccccccCceEEEEecchhHHH
Confidence 888 7665555566555531 1 22223322 2 689999987 53
No 52
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=99.09 E-value=4.3e-10 Score=117.53 Aligned_cols=108 Identities=15% Similarity=0.101 Sum_probs=75.3
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh---CCceeeCcHHHHHHHcCchhhhhh-ccChHHHHHHHHHHHHHHhcCCCEE
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL---GYTPLSTKELLETFAKQTIDSWML-AEGSDSVVNGECDVLESLSSHVRAV 259 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L---g~~fID~D~lIE~~~g~sI~ei~~-~~Gee~FRelE~~vL~~L~~~~~~V 259 (345)
.+++.|+|+|++||||||+|+.||+.| |++++++|..+.. .++.....+. +.+++.||++. ++++.+......|
T Consensus 50 ~~g~lIvLtGlsGSGKSTlAr~La~~L~~~G~~~v~lDgD~iR-~~L~~~~~fs~~dree~~r~i~-eva~~~l~~G~iV 127 (630)
T 1x6v_B 50 FRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIR-QGLNKNLGFSPEDREENVRRIA-EVAKLFADAGLVC 127 (630)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEESHHHHT-TTTTTTCCSSHHHHHHHHHHHH-HHHHHHHHTTCEE
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEechHHhh-hccCccccCChhhhHHHHHHHH-HHHHHHHhCCCEE
Confidence 367789999999999999999999999 9999999865443 2444444444 57888898874 3555555444555
Q ss_pred EEcCCCCCcccC---cHHHHHHHh-cC---cEEEEEcChhhhchhh
Q 019172 260 VATLGGQQGAAA---RADKWQHLY-AG---FTVWLSQTEAMGKLLR 298 (345)
Q Consensus 260 IAtGGG~~~avl---r~~~r~~L~-~G---~VV~Ld~s~a~~~~~R 298 (345)
|+. ++ .+. ++.++++++ .| .+|||+++.++. ..|
T Consensus 128 I~d-~~---s~~~~~r~~~r~ll~~~g~p~~vV~Ldap~Evl-~~R 168 (630)
T 1x6v_B 128 ITS-FI---SPYTQDRNNARQIHEGASLPFFEVFVDAPLHVC-EQR 168 (630)
T ss_dssp EEE-CC---CCCHHHHHHHHHHHHTTTCCEEEEEEECCHHHH-HHH
T ss_pred EEe-Cc---hhhHHHHHHHHHHHHhCCCCeEEEEEECCHHHH-HHH
Confidence 544 32 133 556666665 34 399999999876 444
No 53
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=99.09 E-value=1.7e-10 Score=101.96 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=41.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH---cCchhhhhhccChH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA---KQTIDSWMLAEGSD 239 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~---g~sI~ei~~~~Gee 239 (345)
++.|+|+|++||||||+++.||+ +|++++|+|+++.+.. +..+.++++..|+.
T Consensus 4 ~~~I~i~G~~GSGKST~~~~L~~-lg~~~id~D~~~~~~~~~~~~~~~~i~~~~g~~ 59 (218)
T 1vht_A 4 RYIVALTGGIGSGKSTVANAFAD-LGINVIDADIIARQVVEPGAPALHAIADHFGAN 59 (218)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHH-TTCEEEEHHHHHHHTTSTTCTHHHHHHHHHCGG
T ss_pred ceEEEEECCCCCCHHHHHHHHHH-cCCEEEEccHHHHHHhcCChHHHHHHHHHhHHH
Confidence 56799999999999999999999 9999999999987754 23445555444443
No 54
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=99.08 E-value=8.2e-10 Score=96.04 Aligned_cols=104 Identities=14% Similarity=0.172 Sum_probs=66.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH---cCc----hhhhhhccChHHHHHHHHHHHHH-----H
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA---KQT----IDSWMLAEGSDSVVNGECDVLES-----L 252 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~---g~s----I~ei~~~~Gee~FRelE~~vL~~-----L 252 (345)
+.+.|+|+|++||||||+++.||+.+|++++|+|+++++.. |.. +.+++. +|+..+++.+..++.+ +
T Consensus 14 ~~~~I~l~G~~GsGKsT~~~~L~~~~g~~~i~~d~~~~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~l~~~i~~~l 92 (203)
T 1ukz_A 14 QVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIK-EGQIVPQEITLALLRNAISDNV 92 (203)
T ss_dssp TCEEEEEECSTTSSHHHHHHHHHHHSSCEEEEHHHHHHHHHHSTTCSCHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHcCceEEeHHHHHHHHHhccCCHHHHHHHHHHH-cCCcCCHHHHHHHHHHHHHhhh
Confidence 34679999999999999999999999999999999987753 333 333433 4554444444433322 2
Q ss_pred hcCCCEEEEcCCCCCcccCcHHHHHHH----h-cCcEEEEEcChhhh
Q 019172 253 SSHVRAVVATLGGQQGAAARADKWQHL----Y-AGFTVWLSQTEAMG 294 (345)
Q Consensus 253 ~~~~~~VIAtGGG~~~avlr~~~r~~L----~-~G~VV~Ld~s~a~~ 294 (345)
..+.+.+|-.|- ....+....+ . .+.+|||++|+++.
T Consensus 93 ~~g~~~~i~dg~-----~~~~~~~~~~~~~~~~~~~~i~l~~~~e~~ 134 (203)
T 1ukz_A 93 KANKHKFLIDGF-----PRKMDQAISFERDIVESKFILFFDCPEDIM 134 (203)
T ss_dssp HTTCCEEEEETC-----CCSHHHHHHHHHHTCCCSEEEEEECCHHHH
T ss_pred ccCCCeEEEeCC-----CCCHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence 333234443333 1222222222 2 36799999999765
No 55
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=99.07 E-value=3.8e-10 Score=104.12 Aligned_cols=106 Identities=11% Similarity=0.085 Sum_probs=67.7
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh-CCceeeCcHHHHHHHcCchh---hhhhccChHHHHHHHHHHHHHHh---cCCCEE
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL-GYTPLSTKELLETFAKQTID---SWMLAEGSDSVVNGECDVLESLS---SHVRAV 259 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L-g~~fID~D~lIE~~~g~sI~---ei~~~~Gee~FRelE~~vL~~L~---~~~~~V 259 (345)
+.|+|+|++||||||+|+.|++.+ |+.++|+|.+.+...+++.. .+. ..++..+.+...+++.... .....|
T Consensus 3 ~~I~l~G~~GsGKST~a~~L~~~~~~~~~i~~D~~r~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~g~~v 81 (301)
T 1ltq_A 3 KIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYT-KKKEGIVTGMQFDTAKSILYGGDSVKGV 81 (301)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHSTTEEEECHHHHHHHHTTSCCCC---CC-HHHHHHHHHHHHHHHHHHTTSCTTCCEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHhCCCcEEecccHHHHHhccCCcccccccc-hhhhhHHHHHHHHHHHHHHhhccCCCEE
Confidence 469999999999999999999985 99999999877766553221 121 2233344443344455554 444556
Q ss_pred EEcCCCCCcccCcHHHHHHHh-----cC---cEEEEEcChhhhchhhh
Q 019172 260 VATLGGQQGAAARADKWQHLY-----AG---FTVWLSQTEAMGKLLRV 299 (345)
Q Consensus 260 IAtGGG~~~avlr~~~r~~L~-----~G---~VV~Ld~s~a~~~~~Rv 299 (345)
|..|.. .....++.+. .| .+|||+++.++. ..|.
T Consensus 82 i~d~~~-----~~~~~~~~l~~~~~~~~~~~~~i~l~~~~e~~-~~R~ 123 (301)
T 1ltq_A 82 IISDTN-----LNPERRLAWETFAKEYGWKVEHKVFDVPWTEL-VKRN 123 (301)
T ss_dssp EECSCC-----CCHHHHHHHHHHHHHTTCEEEEEECCCCHHHH-HHHH
T ss_pred EEeCCC-----CCHHHHHHHHHHHHHcCCcEEEEEEECCHHHH-HHHH
Confidence 655542 4444444432 24 689999988765 4443
No 56
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=99.07 E-value=2.8e-10 Score=97.53 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=66.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh---CCceeeCcHHHHHHHcCchhh-hhhccChHHHHHHHHHHHHHHhcCCCEEE
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL---GYTPLSTKELLETFAKQTIDS-WMLAEGSDSVVNGECDVLESLSSHVRAVV 260 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L---g~~fID~D~lIE~~~g~sI~e-i~~~~Gee~FRelE~~vL~~L~~~~~~VI 260 (345)
+++.|+|+|++||||||+++.|++.| |++++++|...... +..... +...++++.|++++... ..+.. .+.++
T Consensus 4 ~g~~i~l~G~~GsGKST~~~~L~~~l~~~g~~~i~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 80 (179)
T 2pez_A 4 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQ-GLNKNLGFSPEDREENVRRIAEVA-KLFAD-AGLVC 80 (179)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHTT-TTTTTCCSSHHHHHHHHHHHHHHH-HHHHH-TTCEE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHhhCCCcEEEECChHHHH-HHhhccccccccHHHHHHHHHHHH-HHHHH-CCCEE
Confidence 57889999999999999999999998 99999776544321 111111 12235667787776422 22223 23333
Q ss_pred EcCCCCCcccC---cHHHHHHHh-cC---cEEEEEcChhhhchhh
Q 019172 261 ATLGGQQGAAA---RADKWQHLY-AG---FTVWLSQTEAMGKLLR 298 (345)
Q Consensus 261 AtGGG~~~avl---r~~~r~~L~-~G---~VV~Ld~s~a~~~~~R 298 (345)
++++.+ +. +..+++.++ .| .+|||++|+++. ..|
T Consensus 81 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~l~~~~e~~-~~R 121 (179)
T 2pez_A 81 -ITSFIS--PYTQDRNNARQIHEGASLPFFEVFVDAPLHVC-EQR 121 (179)
T ss_dssp -EEECCC--CCHHHHHHHHHHHHHTTCCEEEEEEECCHHHH-HHH
T ss_pred -EEecCC--cchHHHHHHHHHhhccCCCeEEEEEeCCHHHH-HHH
Confidence 344431 22 344455554 45 689999999866 444
No 57
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=99.04 E-value=5.5e-12 Score=111.08 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=36.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET 223 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~ 223 (345)
+++.|+|+|++||||||+|+.||+.+|++++|+|+++++
T Consensus 2 ~~~~i~i~G~~gsGkst~~~~l~~~~g~~~~~~d~~~~~ 40 (219)
T 2h92_A 2 KAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRA 40 (219)
T ss_dssp -CCCEEEECCTTSSHHHHHHHHHHHTTCEEEEHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHhcCCceecCChHHHH
Confidence 457899999999999999999999999999999999875
No 58
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=99.04 E-value=1.2e-10 Score=112.90 Aligned_cols=78 Identities=17% Similarity=0.130 Sum_probs=66.2
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCc--------------------hhhhhhccChHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQT--------------------IDSWMLAEGSDSVVNGEC 246 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~s--------------------I~ei~~~~Gee~FRelE~ 246 (345)
+.|+|+|++||||||+|+.||+.++..+|++|.++... |++ +.++++..++..|++.+.
T Consensus 6 ~~i~i~GptGsGKTtla~~La~~l~~~iis~Ds~qvy~-~~~igTakp~~~e~~gvph~lid~~~~~~~~~~~~F~~~a~ 84 (323)
T 3crm_A 6 PAIFLMGPTAAGKTDLAMALADALPCELISVDSALIYR-GMDIGTAKPSRELLARYPHRLIDIRDPAESYSAAEFRADAL 84 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHSCEEEEEECTTTTBT-TCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHcCCcEEeccchhhhc-CCCcccCCCCHHHHcCCCEEEeeccCcccccCHHHHHHHHH
Confidence 47999999999999999999999999999999975322 333 345667789999999999
Q ss_pred HHHHHHhcCCCEEEEcCCC
Q 019172 247 DVLESLSSHVRAVVATLGG 265 (345)
Q Consensus 247 ~vL~~L~~~~~~VIAtGGG 265 (345)
++++++...++.+|.+||+
T Consensus 85 ~~i~~i~~~g~~~IlvGGt 103 (323)
T 3crm_A 85 AAMAKATARGRIPLLVGGT 103 (323)
T ss_dssp HHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHcCCeEEEECCc
Confidence 9999988878888888886
No 59
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=99.04 E-value=3.6e-10 Score=96.03 Aligned_cols=39 Identities=10% Similarity=-0.013 Sum_probs=35.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKELLETFA 225 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~lIE~~~ 225 (345)
+.|+|+|++||||||+++.|++.|+ +.++++|+++.+..
T Consensus 2 ~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~~~~~~~~~~~~~ 45 (194)
T 1nks_A 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATA 45 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhcCceEEEEECChHHHHHH
Confidence 4699999999999999999999998 89999999887655
No 60
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=99.00 E-value=1.6e-10 Score=105.12 Aligned_cols=38 Identities=18% Similarity=0.166 Sum_probs=34.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCc----------eeeCcHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYT----------PLSTKELLE 222 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~----------fID~D~lIE 222 (345)
+...|.|+|++||||||+|+.||+.||++ ++|+|+++.
T Consensus 21 ~~~iI~I~G~~GSGKST~a~~L~~~lg~~~~d~~~~~~~~i~~D~~~~ 68 (252)
T 1uj2_A 21 EPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYR 68 (252)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHTTGGGSCGGGCSEEEEEGGGGBC
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHHhhhhcccccCCceEEEecCcccc
Confidence 34679999999999999999999999998 799999875
No 61
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=98.96 E-value=2.2e-09 Score=100.89 Aligned_cols=109 Identities=8% Similarity=0.042 Sum_probs=68.9
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh--CCceeeCcHHHHHHHcC-----chhhhhhccChHHHHHHHHHHHHHHh-cC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL--GYTPLSTKELLETFAKQ-----TIDSWMLAEGSDSVVNGECDVLESLS-SH 255 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L--g~~fID~D~lIE~~~g~-----sI~ei~~~~Gee~FRelE~~vL~~L~-~~ 255 (345)
..++.|+|+|+|||||||+++.|++.+ ++.+||+|.+.....+. ...++.......++..+...+++++. .+
T Consensus 31 ~~~~livl~G~sGsGKSTla~~L~~~~~~~~~~Is~D~~R~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~v~~~l~~g 110 (287)
T 1gvn_B 31 ESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQG 110 (287)
T ss_dssp SSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTTSTTHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhCCCeEEEechHhHHhchhhHHHHHHccchhhhhhhHHHHHHHHHHHHHHHhcC
Confidence 346789999999999999999999999 89999999875322110 01111111113455665555666544 44
Q ss_pred CCEEEEcCCCCCcccCcHHHHHHHh-cCc---EEEEEcChhhh
Q 019172 256 VRAVVATLGGQQGAAARADKWQHLY-AGF---TVWLSQTEAMG 294 (345)
Q Consensus 256 ~~~VIAtGGG~~~avlr~~~r~~L~-~G~---VV~Ld~s~a~~ 294 (345)
.++||.+..+. +..+...++.++ .|. ++|+.+|+++.
T Consensus 111 ~~vIld~~~~~--~~~~~~~~~~~~~~g~~~~~i~~~~p~~~~ 151 (287)
T 1gvn_B 111 YNLVIEGTGRT--TDVPIQTATMLQAKGYETKMYVMAVPKINS 151 (287)
T ss_dssp CCEEECCCCCC--SHHHHHHHHHHHTTTCEEEEEEECCCHHHH
T ss_pred CeEEEECCCCC--HHHHHHHHHHHHhCCCcEEEEEEECCHHHH
Confidence 56677544431 222445566665 453 68899998866
No 62
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=98.95 E-value=2.8e-09 Score=97.13 Aligned_cols=112 Identities=13% Similarity=0.085 Sum_probs=68.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH------cCchhhhhhccChHHHHHHHHHHHHH-HhcC--
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA------KQTIDSWMLAEGSDSVVNGECDVLES-LSSH-- 255 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~------g~sI~ei~~~~Gee~FRelE~~vL~~-L~~~-- 255 (345)
+++.|+|+|++||||||+++.|++.+|++++++|+++.+.. |..+.+++.. |...-.+.-..++.+ +...
T Consensus 28 ~~~~I~l~G~~GsGKsT~a~~L~~~~g~~~is~~~~~r~~~~~~~~~g~~i~~~~~~-g~~~~~~~~~~~~~~~l~~~~~ 106 (243)
T 3tlx_A 28 PDGRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINE-GKLVDDQMVLSLVDEKLKTPQC 106 (243)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHTTSSSHHHHHHHHHHHT-TCCCCHHHHHHHHHHHTTSGGG
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhCCeEEecHHHHHHHHhccchHHHHHHHHHhc-CCCCcHHHHHHHHHHHHhcccc
Confidence 57889999999999999999999999999999999988753 2233344433 221111111223322 2221
Q ss_pred CCEEEEcCCCCCcccCcHHHHHH----Hh-----cCcEEEEEcChhhhchhhhhhhc
Q 019172 256 VRAVVATLGGQQGAAARADKWQH----LY-----AGFTVWLSQTEAMGKLLRVFVLS 303 (345)
Q Consensus 256 ~~~VIAtGGG~~~avlr~~~r~~----L~-----~G~VV~Ld~s~a~~~~~Rv~v~~ 303 (345)
...+|..|- +........ +. -..+|||++|+++. ..|..-+.
T Consensus 107 ~~~~ildg~-----p~~~~q~~~l~~~l~~~~~~~d~vi~l~~p~e~~-~~Rl~~R~ 157 (243)
T 3tlx_A 107 KKGFILDGY-----PRNVKQAEDLNKLLQKNQTKLDGVFYFNVPDEVL-VNRISGRL 157 (243)
T ss_dssp SSEEEEESC-----CCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH-HHHHHTEE
T ss_pred cCCEEecCC-----CCcHHHHHHHHHHHHHcCCCCceEEEEeCCHHHH-HHHHHcCC
Confidence 334554442 233332332 21 25799999999865 55544333
No 63
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=98.95 E-value=8e-10 Score=113.65 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=73.2
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhC------CceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLG------YTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVR 257 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg------~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~ 257 (345)
.++..|+|+|++|||||||++.||..|+ +.++|+|++.+.. +..+. +-..+++++++.+ ..+++.+....+
T Consensus 367 ~~G~iI~LiG~sGSGKSTLar~La~~L~~~~G~~i~~lDgD~~~~~l-~~~l~-f~~~~r~~~~r~i-~~v~q~l~~~~~ 443 (552)
T 3cr8_A 367 RQGFTVFFTGLSGAGKSTLARALAARLMEMGGRCVTLLDGDIVRRHL-SSELG-FSKAHRDVNVRRI-GFVASEITKNRG 443 (552)
T ss_dssp GSCEEEEEEESSCHHHHHHHHHHHHHHHTTCSSCEEEESSHHHHHHT-TSSCC-CSHHHHHHHHHHH-HHHHHHHHHTTC
T ss_pred ccceEEEEECCCCChHHHHHHHHHHhhcccCCceEEEECCcHHHHhh-ccccC-CCHHHHHHHHHHH-HHHHHHHHhcCC
Confidence 3678999999999999999999999995 5689999987642 22222 1122344556554 556666666677
Q ss_pred EEEEcCCCCCcccCcHHHHHHHh-cC--cEEEEEcChhhhchhh
Q 019172 258 AVVATLGGQQGAAARADKWQHLY-AG--FTVWLSQTEAMGKLLR 298 (345)
Q Consensus 258 ~VIAtGGG~~~avlr~~~r~~L~-~G--~VV~Ld~s~a~~~~~R 298 (345)
.||+++++. ....++.+++.|+ .| .+|||+++.++. ..|
T Consensus 444 ivi~~~~~~-~~~~r~~~r~lL~~~g~f~~V~L~~~~e~~-~~R 485 (552)
T 3cr8_A 444 IAICAPIAP-YRQTRRDVRAMIEAVGGFVEIHVATPIETC-ESR 485 (552)
T ss_dssp EEEECCCCC-CHHHHHHHHHHHHTTSEEEEEEECC---------
T ss_pred EEEEecCCc-cHHHHHHHHHHHHHcCCEEEEEEcCCHHHH-HHh
Confidence 888877641 1356777888887 47 899999998765 344
No 64
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=98.93 E-value=4.8e-09 Score=95.87 Aligned_cols=147 Identities=12% Similarity=0.041 Sum_probs=93.7
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH---cCchhhhhhccChHHHH--------------------
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA---KQTIDSWMLAEGSDSVV-------------------- 242 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~---g~sI~ei~~~~Gee~FR-------------------- 242 (345)
-+-|-|+|.+||||||++++|++ +|++++|+|.+..+.. +..+.++++..|++.|.
T Consensus 9 ~~~iglTGgigsGKStv~~~l~~-~g~~vidaD~ia~~l~~~~~~~~~~i~~~fG~~~~~~dg~ldR~~L~~~vF~d~~~ 87 (210)
T 4i1u_A 9 MYAIGLTGGIGSGKTTVADLFAA-RGASLVDTDLIAHRITAPAGLAMPAIEQTFGPAFVAADGSLDRARMRALIFSDEDA 87 (210)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHH-TTCEEEEHHHHHHHHTSTTCTTHHHHHHHHCGGGBCTTSSBCHHHHHHHHHHCHHH
T ss_pred eeEEEEECCCCCCHHHHHHHHHH-CCCcEEECcHHHHHHhcCCcHHHHHHHHHhChhhcCCCCCCcHHHHHHHHhCCHHH
Confidence 46799999999999999999998 9999999999887765 45677888877877652
Q ss_pred --HHHH--------HHHHHHhc-CCCEEEEcCCCCCcccCcH-HHHHHHhcCcEEEEEcChhhhchhhhhhhcc------
Q 019172 243 --NGEC--------DVLESLSS-HVRAVVATLGGQQGAAARA-DKWQHLYAGFTVWLSQTEAMGKLLRVFVLSL------ 304 (345)
Q Consensus 243 --elE~--------~vL~~L~~-~~~~VIAtGGG~~~avlr~-~~r~~L~~G~VV~Ld~s~a~~~~~Rv~v~~~------ 304 (345)
.+|. ++.+.+.. ....||.-.. .+-+ ..+.. .-+.+|||++|+++. ..|...++.
T Consensus 88 ~~~L~~i~HP~I~~~~~~~~~~~~~~~vv~d~p-----LL~E~~~~~~-~~D~vi~V~ap~e~r-~~Rl~~Rdg~s~eea 160 (210)
T 4i1u_A 88 RRRLEAITHPLIRAETEREARDAQGPYVIFVVP-----LLVESRNWKA-RCDRVLVVDCPVDTQ-IARVMQRNGFTREQV 160 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSSSEEEECT-----TCTTCHHHHH-HCSEEEEEECCHHHH-HHHHHHHHCCCHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCCCEEEEEEe-----cccccCCccc-cCCeEEEEECCHHHH-HHHHHhcCCCCHHHH
Confidence 1111 11222222 2334554433 3444 33432 258899999999865 344332211
Q ss_pred -----ccccccccceeeeeeccCC-CChHHHhhhcchhhhhh
Q 019172 305 -----HLRSVTSYFVRLEFVSSFS-RTNEHIMARKPAVMKTL 340 (345)
Q Consensus 305 -----h~R~~~~~~~~le~i~~~~-r~~~~~~~~~~~~~~~~ 340 (345)
.+++.........+|.+=+ .+.|++.+.=-.+++.+
T Consensus 161 ~~ri~~Q~~~eek~~~AD~VIdN~~gsle~l~~qV~~l~~~~ 202 (210)
T 4i1u_A 161 EAIIARQATREARLAAADDVIVNDAATPDALAVQVDALHQRY 202 (210)
T ss_dssp HHHHHHSCCHHHHHHTCSEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCChHHHHHhCCEEEECCCCCHHHHHHHHHHHHHHH
Confidence 1223333334566778878 78888887655555544
No 65
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=98.93 E-value=3e-09 Score=98.57 Aligned_cols=122 Identities=14% Similarity=0.071 Sum_probs=81.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH------HcCchhhhhhccChHHHHHHHHHHHHH-Hhc---
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF------AKQTIDSWMLAEGSDSVVNGECDVLES-LSS--- 254 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~------~g~sI~ei~~~~Gee~FRelE~~vL~~-L~~--- 254 (345)
-.+.+-|+|++||||||+++.||+.+|+++|++|+++.+. .|..+.+++. .|.....++..+++++ |.+
T Consensus 7 ~~~~~~~~G~pGsGKsT~a~~L~~~~g~~~is~gdllR~~~~~~t~lG~~i~~~~~-~G~lvpdei~~~ll~~~l~~~~~ 85 (230)
T 3gmt_A 7 HHMRLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMD-EGKLVPDSLIIGLVKERLKEADC 85 (230)
T ss_dssp --CEEEEECCTTSCHHHHHHHHHHHHTCCEECHHHHHHHHHHTTCHHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHSGGG
T ss_pred cccceeeECCCCCCHHHHHHHHHHHhCCCeeechHHHHHhccCCChHHHHHHHHHh-hccccccHHHHHHHHHHHhCccc
Confidence 4578999999999999999999999999999999998875 2344556655 3665566666555544 332
Q ss_pred CCCEEEEcCCCCCcccCcHHHHHHHh-c----CcEEEEEcChhhhchhhhhhhccccccccccce
Q 019172 255 HVRAVVATLGGQQGAAARADKWQHLY-A----GFTVWLSQTEAMGKLLRVFVLSLHLRSVTSYFV 314 (345)
Q Consensus 255 ~~~~VIAtGGG~~~avlr~~~r~~L~-~----G~VV~Ld~s~a~~~~~Rv~v~~~h~R~~~~~~~ 314 (345)
..++|+ .| + +-+....+.|. . ..||||++|.++. ..|..-+..+.-....|+.
T Consensus 86 ~~g~IL-DG--f---PRt~~Qa~~L~~~~~~~d~VI~Ldvp~e~l-~~Rl~~R~~~~~~G~~Yh~ 143 (230)
T 3gmt_A 86 ANGYLF-DG--F---PRTIAQADAMKEAGVAIDYVLEIDVPFSEI-IERMSGRRTHPASGRTYHV 143 (230)
T ss_dssp TTCEEE-ES--C---CCSHHHHHHHHHTTCCCSEEEEECCCHHHH-HHHHHTEEEETTTTEEEET
T ss_pred CCCeEe-cC--C---CCcHHHHHHHHHhCCCccEEEEEeCCHHHH-HHHHHcCCcccccCCcccc
Confidence 234554 33 2 55555555554 2 4799999999876 5664444444444444443
No 66
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=98.92 E-value=2.9e-11 Score=108.95 Aligned_cols=40 Identities=25% Similarity=0.335 Sum_probs=37.2
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET 223 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~ 223 (345)
..+..|.|+|++||||||+++.||+.||++++|+|+++..
T Consensus 14 ~~~~~i~i~G~~gsGKst~~~~l~~~lg~~~~d~d~~~~~ 53 (236)
T 1q3t_A 14 MKTIQIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRA 53 (236)
T ss_dssp CCCCEEEEECSSCSSHHHHHHHHHHHHCCEEEEHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHcCCceecCCCeeEc
Confidence 3578899999999999999999999999999999999865
No 67
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=98.92 E-value=4e-09 Score=98.53 Aligned_cols=39 Identities=23% Similarity=0.085 Sum_probs=34.5
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA 225 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~ 225 (345)
.+.|.|+|++||||||+|+.|+ .+|+++||+|++..+..
T Consensus 75 ~~iI~I~G~~GSGKSTva~~La-~lg~~~id~D~~~~~~~ 113 (281)
T 2f6r_A 75 LYVLGLTGISGSGKSSVAQRLK-NLGAYIIDSDHLGHRAY 113 (281)
T ss_dssp CEEEEEEECTTSCHHHHHHHHH-HHTCEEEEHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHH-HCCCcEEehhHHHHHHh
Confidence 4579999999999999999999 69999999999866543
No 68
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=98.91 E-value=2e-09 Score=106.02 Aligned_cols=89 Identities=19% Similarity=0.112 Sum_probs=64.6
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEEEEcCCC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VIAtGGG 265 (345)
++.|+|+|+|||||||+|+.|++.+|+.+||.|++- .++.+...+.+.+..+..+||.+.++
T Consensus 258 ~~lIil~G~pGSGKSTla~~L~~~~~~~~i~~D~~~------------------~~~~~~~~~~~~l~~g~~vIiD~~~~ 319 (416)
T 3zvl_A 258 PEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLG------------------SWQRCVSSCQAALRQGKRVVIDNTNP 319 (416)
T ss_dssp CCEEEEESCTTSSHHHHHHHHTGGGTCEECCGGGSC------------------SHHHHHHHHHHHHHTTCCEEEESCCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhcCcEEEccchHH------------------HHHHHHHHHHHHHhcCCcEEEeCCCC
Confidence 567999999999999999999999999999999961 24555555666666666677766553
Q ss_pred CCcccCcHHHHHHHh-cC---cEEEEEcChhhh
Q 019172 266 QQGAAARADKWQHLY-AG---FTVWLSQTEAMG 294 (345)
Q Consensus 266 ~~~avlr~~~r~~L~-~G---~VV~Ld~s~a~~ 294 (345)
. ...+...++.++ .| .+|||+++.++.
T Consensus 320 ~--~~~r~~~~~~~~~~~~~~~~v~l~~~~e~l 350 (416)
T 3zvl_A 320 D--VPSRARYIQCAKDAGVPCRCFNFCATIEQA 350 (416)
T ss_dssp S--HHHHHHHHHHHHHHTCCEEEEEECCCHHHH
T ss_pred C--HHHHHHHHHHHHHcCCeEEEEEEeCCHHHH
Confidence 1 233444444444 34 589999998755
No 69
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=98.89 E-value=5.1e-09 Score=94.50 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=69.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH--cC----chhhhhhccChHHHHHHHHHHHHHHhcCCCEEE
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA--KQ----TIDSWMLAEGSDSVVNGECDVLESLSSHVRAVV 260 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~--g~----sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~VI 260 (345)
|.|+|+|+|||||+|+|+.||+.+|+++|++.+++.+.. +. .+.+++. .|.-.=-++-..++++.....+.+|
T Consensus 1 M~Iil~GpPGsGKgTqa~~La~~~g~~~istGdllR~~i~~~t~lg~~~~~~~~-~G~lvpd~iv~~lv~~~l~~~~~~i 79 (206)
T 3sr0_A 1 MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYME-RGELVPDDLIIALIEEVFPKHGNVI 79 (206)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHHTCHHHHHHHHHHH-HTCCCCHHHHHHHHHHHCCSSSCEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCeEEcHHHHHHHHHHhcChhhhhHHHHHh-cCCcCCHHHHHHHHHHhhccCCceE
Confidence 679999999999999999999999999999999987643 22 2223322 2322222233344444333333444
Q ss_pred EcCCCCCcccCcHHHHHHH----h-c----CcEEEEEcChhhhchhhhhhhccc
Q 019172 261 ATLGGQQGAAARADKWQHL----Y-A----GFTVWLSQTEAMGKLLRVFVLSLH 305 (345)
Q Consensus 261 AtGGG~~~avlr~~~r~~L----~-~----G~VV~Ld~s~a~~~~~Rv~v~~~h 305 (345)
-.|- +-+....+.| . . ..||+|++|.+.. ..|..-++.+
T Consensus 80 lDGf-----PRt~~Qa~~l~~~l~~~~~~~~~vi~l~v~~e~l-~~Rl~~R~~~ 127 (206)
T 3sr0_A 80 FDGF-----PRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVV-IERLSGRRIN 127 (206)
T ss_dssp EESC-----CCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH-HHHHHTEEEC
T ss_pred ecCC-----chhHHHHHHHHhhHHHhccccceeeecCCCHHHH-HHHHhCCccc
Confidence 4443 5554444433 2 2 4699999999876 4454444333
No 70
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=98.88 E-value=7e-11 Score=116.16 Aligned_cols=63 Identities=16% Similarity=0.136 Sum_probs=59.4
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCce--------------------eeCcHHHHHHHcCchhhhhhccChHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTP--------------------LSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~f--------------------ID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~ 246 (345)
.+|+|+|+||+||||+|+.||..|+++| +|+|+.|++..|+++.++|+..|| .||+.|.
T Consensus 25 ~~i~l~G~~G~GKTTl~~~la~~l~~~f~~l~a~~~g~~~ir~~~~~a~d~D~~I~~~~g~~i~~if~~~ge-~fr~~E~ 103 (359)
T 2ga8_A 25 VCVILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDRLKPMVNLVDSLKTLQPNKVAEMIENQGL-FKDHVED 103 (359)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHHHHHHHHHSTTCCCEECTTSCCCCSSTTSEECCHHHHHHHHHTTTC-CGGGTTC
T ss_pred eEEEEECCCCCcHHHHHHHHHHHhCCCeeeecccccchHHHHHHHHhhhhhhhHHHHHhCccHHHHHHHhcc-cchHHHh
Confidence 4699999999999999999999999999 999999999999999999999999 9999998
Q ss_pred HHHH
Q 019172 247 DVLE 250 (345)
Q Consensus 247 ~vL~ 250 (345)
..++
T Consensus 104 ~~~~ 107 (359)
T 2ga8_A 104 VNFQ 107 (359)
T ss_dssp TTCC
T ss_pred hhcc
Confidence 6654
No 71
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=98.88 E-value=4.5e-09 Score=90.50 Aligned_cols=106 Identities=14% Similarity=0.013 Sum_probs=59.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCEE
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAV 259 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~V 259 (345)
+++.|+|+|++||||||+++.||+.|+ +.++|.|.+.+...+. . .+...+.+..++.+. .+.+.+......|
T Consensus 12 ~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~~~~~~~~-~-~~~~~~r~~~~~~~~-~~~~~~~~~g~~v 88 (186)
T 2yvu_A 12 KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGDWARTTVSEG-A-GFTREERLRHLKRIA-WIARLLARNGVIV 88 (186)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHTTTTTT-C-CCCHHHHHHHHHHHH-HHHHHHHTTTCEE
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHHHHHHHHhhc-c-CCChhhHHHHHHHHH-HHHHHHHhCCCEE
Confidence 577899999999999999999999986 4678988874432221 0 010111111222111 1222333434445
Q ss_pred EEcCCCCCcccCcHHHHHHHhc----CcEEEEEcChhhh
Q 019172 260 VATLGGQQGAAARADKWQHLYA----GFTVWLSQTEAMG 294 (345)
Q Consensus 260 IAtGGG~~~avlr~~~r~~L~~----G~VV~Ld~s~a~~ 294 (345)
|+ +++......++..++.+.. +.+|||++|+++.
T Consensus 89 i~-d~~~~~~~~r~~~~~~~~~~~~~~~~v~L~~~~e~~ 126 (186)
T 2yvu_A 89 IC-SFVSPYKQARNMVRRIVEEEGIPFLEIYVKASLEEV 126 (186)
T ss_dssp EE-ECCCCCHHHHHHHHHHHHHTTCCEEEEEEECCHHHH
T ss_pred EE-eCccccHHHHHHHHHHhhccCCCeEEEEEeCCHHHH
Confidence 54 3331000123344444442 4799999998865
No 72
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=98.88 E-value=3.5e-09 Score=88.77 Aligned_cols=93 Identities=22% Similarity=0.426 Sum_probs=78.2
Q ss_pred CCCCcceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeeccCCccceeeeccccccccCCCceeeeccc-ce
Q 019172 75 PANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDED-QL 153 (345)
Q Consensus 75 ~~~~~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~-~~ 153 (345)
-+.+++|.|+|+..||.++|+||.....+++++.|++...+|+|++++.. .+|+ ..||..|.|.++.|.+++. .+
T Consensus 13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~---~~~~-g~L~~~I~~deS~w~i~~~~~i 88 (121)
T 3qor_A 13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQP---AIID-GELYNEVKVEESSWLIADGAVV 88 (121)
T ss_dssp SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTSC---CSEE-EEBSSCBCGGGCEEEEETTTEE
T ss_pred CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCcc---eEEe-ccccccccccccEEEEcCCCEE
Confidence 34567999999999999999999855567899999999999999998753 3566 8999999999999999986 78
Q ss_pred eehccccCCCCCcchhHh
Q 019172 154 VINLKKQDPELKWPDIVE 171 (345)
Q Consensus 154 ~~~~k~~~~~~~~~~~~~ 171 (345)
.+.++|.....-|+.+..
T Consensus 89 ~i~L~K~~~~~~W~~L~~ 106 (121)
T 3qor_A 89 TVHLEKINKMEWWSRLVS 106 (121)
T ss_dssp EEEEEBSSSSCCCSCSBT
T ss_pred EEEEEECCCCCCChhhhc
Confidence 899988776666777643
No 73
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=98.85 E-value=5e-09 Score=92.15 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=35.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF 224 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~ 224 (345)
++.|.|+|++||||||+++.||+.+|++++|+|+++.+.
T Consensus 5 ~~~i~i~G~~GsGKSTl~~~L~~~~g~~~~d~g~i~~~~ 43 (227)
T 1cke_A 5 APVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVL 43 (227)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCcccCcceeehh
Confidence 467999999999999999999999999999999998753
No 74
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=98.85 E-value=8.1e-09 Score=102.82 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=69.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH-----HHHHHHcC-chhhhhhccChHHHHHHHHHHHHHH------
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE-----LLETFAKQ-TIDSWMLAEGSDSVVNGECDVLESL------ 252 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~-----lIE~~~g~-sI~ei~~~~Gee~FRelE~~vL~~L------ 252 (345)
.+..|+|+|+|||||||+|+.||+.|++.++|+|. +.++..|. ...++++..|++.|+..|..++..+
T Consensus 38 ~~~~IvlvGlpGsGKSTia~~La~~l~~~~~~t~~~~~d~~r~~~~g~~~~~~ifd~~g~~~~r~re~~~~~~l~~~~~~ 117 (469)
T 1bif_A 38 CPTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLKIRKQCALAALNDVRKF 117 (469)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHCSCCCGGGGCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHHHhccCCCceEEecchhhhhhccCCCcccccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999999999999988877776 66777776 4557889999988887777644333
Q ss_pred h--cCCCEEEEcCCCCCcccCcHHHHHHH----h-cC-cEEEEEc
Q 019172 253 S--SHVRAVVATLGGQQGAAARADKWQHL----Y-AG-FTVWLSQ 289 (345)
Q Consensus 253 ~--~~~~~VIAtGGG~~~avlr~~~r~~L----~-~G-~VV~Ld~ 289 (345)
. .....||.... ..+.+.|+.+ + .| .+|||+.
T Consensus 118 l~~~~G~~vV~D~t-----n~~~~~R~~~~~~~~~~~~~vv~l~~ 157 (469)
T 1bif_A 118 LSEEGGHVAVFDAT-----NTTRERRAMIFNFGEQNGYKTFFVES 157 (469)
T ss_dssp HHTTCCSEEEEESC-----CCSHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHhCCCCEEEEeCC-----CCCHHHHHHHHHHHHhcCCcEEEEEE
Confidence 1 22334443333 2345555544 3 35 5888883
No 75
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=98.83 E-value=1.9e-08 Score=91.97 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=67.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHHc------CchhhhhhccCh----HHHHHHHHHHHHHHhc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAK------QTIDSWMLAEGS----DSVVNGECDVLESLSS 254 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~g------~sI~ei~~~~Ge----e~FRelE~~vL~~L~~ 254 (345)
+.+.|+|+|+|||||+|+|+.||+.+|+++|++.+++.+... ..+.+++. .|. +..-++-.+.+.+...
T Consensus 28 k~kiI~llGpPGsGKgTqa~~L~~~~g~~hIstGdllR~~i~~~t~lg~~~~~~~~-~G~lVpde~~~~lv~~~l~~~~~ 106 (217)
T 3umf_A 28 KAKVIFVLGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAEVQSGSPKGKELKAMME-RGELVPLEVVLALLKEAMIKLVD 106 (217)
T ss_dssp SCEEEEEECCTTCCHHHHHHHHHHHHCCEEECHHHHHHHHHTTCCHHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHCCceEcHHHHHHHHHHcCCchHHHHHHHHh-cCCCCCHHHHHHHHHHHHhhccc
Confidence 456788899999999999999999999999999999876542 22333332 232 2233333333334333
Q ss_pred CCCEEEEcCCCCCcccCcHHHHHHHh-----cCcEEEEEcChhhh
Q 019172 255 HVRAVVATLGGQQGAAARADKWQHLY-----AGFTVWLSQTEAMG 294 (345)
Q Consensus 255 ~~~~VIAtGGG~~~avlr~~~r~~L~-----~G~VV~Ld~s~a~~ 294 (345)
..+.+|-.|- +-+......|. -+.||+|+++.++.
T Consensus 107 ~~~g~ilDGf-----PRt~~Qa~~l~~~~~~~~~vi~l~v~~e~~ 146 (217)
T 3umf_A 107 KNCHFLIDGY-----PRELDQGIKFEKEVCPCLCVINFDVSEEVM 146 (217)
T ss_dssp TCSEEEEETB-----CSSHHHHHHHHHHTCCCSEEEEEECCHHHH
T ss_pred cccCcccccC-----CCcHHHHHHHHHhCCccCEEEeccCCHHHH
Confidence 3445554442 55555555553 26799999998754
No 76
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=98.83 E-value=1.6e-08 Score=87.34 Aligned_cols=32 Identities=19% Similarity=0.017 Sum_probs=28.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCc--eee
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYT--PLS 216 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~--fID 216 (345)
+++.|+|+|++||||||+++.||+.|+.. +++
T Consensus 3 ~~~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~ 36 (213)
T 2plr_A 3 KGVLIAFEGIDGSGKSSQATLLKDWIELKRDVYL 36 (213)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHTTTSCEEE
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHhhcCCEEE
Confidence 56789999999999999999999999884 665
No 77
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=98.82 E-value=5e-09 Score=89.91 Aligned_cols=30 Identities=20% Similarity=0.356 Sum_probs=28.0
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceee
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLS 216 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID 216 (345)
+.|+|+|++||||||+++.||+.|++.+++
T Consensus 1 ~~I~i~G~~GsGKsT~~~~L~~~l~~~~~~ 30 (205)
T 2jaq_A 1 MKIAIFGTVGAGKSTISAEISKKLGYEIFK 30 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHCCEEEC
T ss_pred CEEEEECCCccCHHHHHHHHHHhcCCcEEc
Confidence 469999999999999999999999998875
No 78
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=98.81 E-value=2.3e-09 Score=93.21 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=30.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKEL 220 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~l 220 (345)
+++.|+|+|++||||||+++.||+.|+..+++.|.+
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v~~~ 43 (215)
T 1nn5_A 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 43 (215)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 578899999999999999999999988776665443
No 79
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=98.81 E-value=3.8e-09 Score=90.54 Aligned_cols=32 Identities=22% Similarity=0.079 Sum_probs=28.9
Q ss_pred eEEEEcCCCCChHHHHHHHHHhh---CCceeeCcH
Q 019172 188 SIFLVGDSTEVNEKVALELAVGL---GYTPLSTKE 219 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~L---g~~fID~D~ 219 (345)
-|+|+|++||||||+++.|++.| |++++.+++
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l~~~g~~v~~~~~ 36 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKRE 36 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHCCC-EEEEES
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEeeC
Confidence 58999999999999999999999 999998765
No 80
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=98.81 E-value=9.8e-09 Score=88.72 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=34.9
Q ss_pred eEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH
Q 019172 188 SIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF 224 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~ 224 (345)
.|.|+|++||||||+|+.||+.||++++|.|++.+..
T Consensus 4 ~i~i~G~~GsGKst~~~~la~~lg~~~~d~d~~~~~~ 40 (208)
T 3ake_A 4 IVTIDGPSASGKSSVARRVAAALGVPYLSSGLLYRAA 40 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTCCEEEHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCceeccchHHHhh
Confidence 7999999999999999999999999999999998664
No 81
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=98.80 E-value=7.8e-09 Score=94.65 Aligned_cols=39 Identities=18% Similarity=0.183 Sum_probs=36.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET 223 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~ 223 (345)
.+..|.|+|++||||||+++.||+.||+.++|.|+++..
T Consensus 26 ~g~~I~I~G~~GsGKSTl~k~La~~Lg~~~~d~g~i~r~ 64 (252)
T 4e22_A 26 IAPVITVDGPSGAGKGTLCKALAESLNWRLLDSGAIYRV 64 (252)
T ss_dssp TSCEEEEECCTTSSHHHHHHHHHHHTTCEEEEHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHhcCCCcCCCCceehH
Confidence 467899999999999999999999999999999999844
No 82
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=98.78 E-value=1.2e-08 Score=86.18 Aligned_cols=92 Identities=21% Similarity=0.437 Sum_probs=77.8
Q ss_pred CCCcceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeeccCCccceeeeccccccccCCCceeeeccc-cee
Q 019172 76 ANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDED-QLV 154 (345)
Q Consensus 76 ~~~~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~-~~~ 154 (345)
+.+++|.|+|+..||.++|+||..+..+++++.|++...+|.|++++.. .+++ ..||..|.|.++.|.+.+. .+.
T Consensus 5 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~---~~~~-~~L~~~I~~e~s~w~i~~~k~v~ 80 (131)
T 1wfi_A 5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQP---PVVD-GELYNEVKVEESSWLIEDGKVVT 80 (131)
T ss_dssp SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSC---CSBC-SCBSSCBCSTTCEEEEETTTEEE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCce---EEEe-cccccccccccCEEEEcCCCEEE
Confidence 3467999999999999999999755577899999999999999997653 3455 8999999999999999887 699
Q ss_pred ehccccCCCCCcchhHh
Q 019172 155 INLKKQDPELKWPDIVE 171 (345)
Q Consensus 155 ~~~k~~~~~~~~~~~~~ 171 (345)
+.++|......|+.+..
T Consensus 81 i~L~K~~~~~~W~~L~~ 97 (131)
T 1wfi_A 81 VHLEKINKMEWWNRLVT 97 (131)
T ss_dssp EEEEBSSSCCCCSCSBS
T ss_pred EEEEECCCCCCChhhhc
Confidence 99999776567777653
No 83
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.74 E-value=2.5e-08 Score=83.52 Aligned_cols=92 Identities=21% Similarity=0.423 Sum_probs=75.6
Q ss_pred CCCcceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeeccCCccceeeeccccccccCCCceeeecccc-ee
Q 019172 76 ANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQ-LV 154 (345)
Q Consensus 76 ~~~~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~~-~~ 154 (345)
+.+++|.|+|+..||.++|+||.. +.+++++.|++...+|.|++++......+++ ..||..|.|.++.|.+++.. +.
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~-~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~-~~L~~~I~~e~S~w~i~~~k~v~ 94 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKH-VVKGKQVSVALSSSSIRVAMLEENGERVLME-GKLTHKINTESSLWSLEPGKCVL 94 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTT-CCSGGGEEEEECSSEEEEEEECSSSEEEEEE-EEBSSCBCTTTCEEEECTTSEEE
T ss_pred CcCCcEEEEEcccEEEEEEEcCCC-CCchhheEEEEEcCEEEEEEEccCCCceEEc-ccccCcCCCcCCEEEEeCCCEEE
Confidence 346699999999999999999952 3368999999999999999986444445666 89999999999999998876 89
Q ss_pred ehccccCCCCCcchhH
Q 019172 155 INLKKQDPELKWPDIV 170 (345)
Q Consensus 155 ~~~k~~~~~~~~~~~~ 170 (345)
+.|+|... .-|+.+.
T Consensus 95 i~L~K~~~-~~W~~L~ 109 (124)
T 1wgv_A 95 VNLSKVGE-YWWNAIL 109 (124)
T ss_dssp EEECBSSS-CCCSCSB
T ss_pred EEEEECCC-CCCcCcc
Confidence 99988753 4677654
No 84
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=98.72 E-value=1.9e-08 Score=87.96 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=34.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh-CCceeeCcHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL-GYTPLSTKELLE 222 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L-g~~fID~D~lIE 222 (345)
.+..|.|+|++||||||+++.|++.+ ++.+++.|+++.
T Consensus 20 ~~~~i~i~G~~GsGKSTl~~~L~~~~~~~~~i~~D~~~~ 58 (207)
T 2qt1_A 20 KTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFK 58 (207)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTTSTTEEEEEGGGGBC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcCCcEEEeCCcccc
Confidence 35678899999999999999999999 899999999865
No 85
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=8.2e-08 Score=80.73 Aligned_cols=96 Identities=13% Similarity=0.215 Sum_probs=81.0
Q ss_pred CCcceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeeccCCccceeeeccccccccCCCceeeecccceeeh
Q 019172 77 NTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVIN 156 (345)
Q Consensus 77 ~~~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~~~~~~ 156 (345)
..++|.|.|+..+|.+.|++++.+....+++.|++...+|.|.+.......-.++-..||..|.|.++.|.+++..+.|.
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~ 98 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLIL 98 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEE
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEE
Confidence 34589999999999999999985444678999999999999999765545556775579999999999999999999999
Q ss_pred ccccCCCCCcchhHhh
Q 019172 157 LKKQDPELKWPDIVES 172 (345)
Q Consensus 157 ~k~~~~~~~~~~~~~~ 172 (345)
|+|.+.+..|+.+...
T Consensus 99 L~K~~~~~~W~~L~~~ 114 (127)
T 1x5m_A 99 CRKKVENTRWDYLTQV 114 (127)
T ss_dssp EECSSSSCCCSSSBHH
T ss_pred EEECCCCCCCCccccc
Confidence 9998876688887543
No 86
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=98.71 E-value=5.6e-08 Score=87.71 Aligned_cols=103 Identities=11% Similarity=0.024 Sum_probs=62.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHHH------cCchhhhhhccChHHHHHHHHHHH-HHHhc--C
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFA------KQTIDSWMLAEGSDSVVNGECDVL-ESLSS--H 255 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~~------g~sI~ei~~~~Gee~FRelE~~vL-~~L~~--~ 255 (345)
++..|+|+|++||||||+++.||+.+|+..++.|+++.... |..+..+++. |.........+.+ ..+.. .
T Consensus 26 ~~~~i~l~G~~GsGKSTl~k~La~~lg~~~~~~G~i~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~v~~~l~~~l~~~~~ 104 (246)
T 2bbw_A 26 KLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEK-SLLVPDHVITRLMMSELENRRG 104 (246)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHCCCCEEHHHHHHHHHHTTCHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHTCTT
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhCCeEecHHHHHHHHHhcCChHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999999876532 2223333332 3222222222222 22332 2
Q ss_pred CCEEEEcCCCCCcccCcHHHHHHH---h-cCcEEEEEcChhhh
Q 019172 256 VRAVVATLGGQQGAAARADKWQHL---Y-AGFTVWLSQTEAMG 294 (345)
Q Consensus 256 ~~~VIAtGGG~~~avlr~~~r~~L---~-~G~VV~Ld~s~a~~ 294 (345)
..+|+ .|.. ......+.+ . -+.+|||++++++.
T Consensus 105 ~~~il-~g~~-----~~~~~~~~l~~~~~~~~vi~L~~~~~~~ 141 (246)
T 2bbw_A 105 QHWLL-DGFP-----RTLGQAEALDKICEVDLVISLNIPFETL 141 (246)
T ss_dssp SCEEE-ESCC-----CSHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred CeEEE-ECCC-----CCHHHHHHHHhhcCCCEEEEEECCHHHH
Confidence 33444 3322 222222222 2 47899999998865
No 87
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=98.70 E-value=2.2e-08 Score=87.72 Aligned_cols=89 Identities=18% Similarity=0.352 Sum_probs=75.1
Q ss_pred CCCCcceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeeccCCccceeeeccccccccCCCceeeecccc-e
Q 019172 75 PANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQ-L 153 (345)
Q Consensus 75 ~~~~~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~~-~ 153 (345)
+..+++|.|+|+..||.++|+||. ..+++++.|++...+|.|++++. ++|+ ..||..|.|.++.|.+.+.. +
T Consensus 10 ~~~~~~y~W~Qt~~eV~v~I~lp~--~~~~kdv~V~i~~~~L~v~~kg~----~~l~-g~L~~~I~~eeS~w~i~~~k~v 82 (157)
T 2rh0_A 10 PCGTPWGQWYQTLEEVFIEVQVPP--GTRAQDIQCGLQSRHVALAVGGR----EILK-GKLFDSTIADEGTWTLEDRKMV 82 (157)
T ss_dssp CEECSSEEEEECSSEEEEEEECCT--TCCGGGEEEEECSSEEEEEETTE----EEEE-EEBSSCBCGGGCEEEEECCCEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCC--CCcccceEEEEecCEEEEEECCE----EEEe-eccccccCccccEEEEcCCcEE
Confidence 446779999999999999999986 25688999999999999999865 3566 89999999999999999876 8
Q ss_pred eehccccCC--CCCcchhH
Q 019172 154 VINLKKQDP--ELKWPDIV 170 (345)
Q Consensus 154 ~~~~k~~~~--~~~~~~~~ 170 (345)
.|.++|... ...|+.+.
T Consensus 83 ~I~L~K~~~~~~~~W~~L~ 101 (157)
T 2rh0_A 83 RIVLTKTKRDAANCWTSLL 101 (157)
T ss_dssp EEEEEBSSCSTTCCCSEEE
T ss_pred EEEEEEcCCCcCCcChhhh
Confidence 899988765 45676654
No 88
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=98.70 E-value=1.5e-08 Score=98.89 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=71.2
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHH--------------HHHHHcCc-----hhhhhhccChHHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKEL--------------LETFAKQT-----IDSWMLAEGSDSVVNGECD 247 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~l--------------IE~~~g~s-----I~ei~~~~Gee~FRelE~~ 247 (345)
..|+|+|++||||||+|+.||+.++..+|++|.+ .++..|.+ +.+..+..+...|++.+..
T Consensus 8 ~lI~I~GptgSGKTtla~~La~~l~~~iis~Ds~qvYr~~~i~Takp~~eE~~~v~hhl~di~~~~~~~~~~dF~~~a~~ 87 (340)
T 3d3q_A 8 FLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYEFKKRAEK 87 (340)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTEEEEECCSSTTBTTCCTTTTCCCTTTTTTCCEESSSCBCTTSCCCHHHHHHHHHH
T ss_pred ceEEEECCCcCcHHHHHHHHHHHcCCceeccccccccccccccccCCCHHHHHHHHHHHHHHhCCccccCHHHHHHHHHH
Confidence 4689999999999999999999999999999997 23333322 3333446677889998888
Q ss_pred HHHHHhcCCCEEEEcCCCCCcccCcHHHHHHHhcCcEEEEE-cChh
Q 019172 248 VLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEA 292 (345)
Q Consensus 248 vL~~L~~~~~~VIAtGGG~~~avlr~~~r~~L~~G~VV~Ld-~s~a 292 (345)
.+.++....+.||.+||+. -+.+.+..|..+|++ .+.+
T Consensus 88 ~i~~i~~~g~~~IlvGGt~-------ly~~~l~~~l~~~~~~~d~~ 126 (340)
T 3d3q_A 88 YIKDITRRGKVPIIAGGTG-------LYIQSLLYNYAFEDESISED 126 (340)
T ss_dssp HHHHHHHTTCEEEEECCCH-------HHHHHHHBCSCCC---CCHH
T ss_pred HHHHHHhCCCcEEEECChh-------hhHHHHHhcccccCCCCChH
Confidence 8888876677788888851 244455566657777 5554
No 89
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=98.70 E-value=1.2e-08 Score=88.71 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=31.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~ 219 (345)
+++.|+|+|++||||||+++.||+.|+.+++++|.
T Consensus 9 ~~~~I~l~G~~GsGKST~~~~L~~~l~~~~~~~~~ 43 (212)
T 2wwf_A 9 KGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKH 43 (212)
T ss_dssp CSCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEE
Confidence 47889999999999999999999999988887753
No 90
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=98.69 E-value=6.8e-09 Score=91.19 Aligned_cols=26 Identities=8% Similarity=0.082 Sum_probs=24.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.++.|+|+|++||||||+++.|++.+
T Consensus 11 ~~~~i~l~G~sGsGKsTl~~~L~~~~ 36 (204)
T 2qor_A 11 RIPPLVVCGPSGVGKGTLIKKVLSEF 36 (204)
T ss_dssp CCCCEEEECCTTSCHHHHHHHHHHHC
T ss_pred cCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 57889999999999999999999998
No 91
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=98.69 E-value=2.5e-08 Score=85.86 Aligned_cols=105 Identities=10% Similarity=-0.084 Sum_probs=58.7
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCC-ceeeCcHHHHHHHcCchhhhh-hccChHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGY-TPLSTKELLETFAKQTIDSWM-LAEGSDSVVNGECDVLESLSSHVRAVVATLG 264 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~-~fID~D~lIE~~~g~sI~ei~-~~~Gee~FRelE~~vL~~L~~~~~~VIAtGG 264 (345)
..|+|+|++||||||+++.|+..++. .++|.|++.+......+.++. ...+...++.++..+...+......|+....
T Consensus 3 ~ii~l~G~~GaGKSTl~~~L~~~~~g~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ild~~~ 82 (189)
T 2bdt_A 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNITDLTVNFLLAQNDVVLDYIA 82 (189)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEEEEEHHHHHTTCCTTCCCGGGCHHHHHHHHHHHHHHHHHHHHTTCEEEEESCC
T ss_pred eEEEEECCCCCcHHHHHHHHhcccCCeEEEcccchhhhhccccccCccchhHHHHHHHHHHHHHHHHHhcCCcEEEeecc
Confidence 46889999999999999999998876 899999876532211222221 1112233444443322222233344555322
Q ss_pred CCCcccCcHHHHHHHh------cCcEEEEEcChhhh
Q 019172 265 GQQGAAARADKWQHLY------AGFTVWLSQTEAMG 294 (345)
Q Consensus 265 G~~~avlr~~~r~~L~------~G~VV~Ld~s~a~~ 294 (345)
+ .......++.++ ...+|||+.+.+..
T Consensus 83 ~---~~~~~~~~~~~~s~g~~~~~~~i~L~~~~e~l 115 (189)
T 2bdt_A 83 F---PDEAEALAQTVQAKVDDVEIRFIILWTNREEL 115 (189)
T ss_dssp C---HHHHHHHHHHHHHHCSSEEEEEEEEECCHHHH
T ss_pred C---HHHHHHHHHHHHhcccCCCeEEEEEeCCHHHH
Confidence 2 122233344443 12368899888754
No 92
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=98.63 E-value=5e-08 Score=100.56 Aligned_cols=106 Identities=18% Similarity=0.182 Sum_probs=60.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC----Cc--eeeCcHHHHHHHcCchhhhhhccChHHHHHHHHHHHHHHhcCCCE
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG----YT--PLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRA 258 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg----~~--fID~D~lIE~~~g~sI~ei~~~~Gee~FRelE~~vL~~L~~~~~~ 258 (345)
+++.|+|+|++||||||+|+.|++.|+ ++ ++|.|.+.....+ ... +-..+..+.++.+ .++++.+......
T Consensus 395 ~~~~I~l~GlsGSGKSTiA~~La~~L~~~G~~~~~~lD~D~ir~~l~~-~~~-f~~~er~~~i~ri-~~v~~~~~~~g~~ 471 (573)
T 1m8p_A 395 QGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSS-ELG-FTREDRHTNIQRI-AFVATELTRAGAA 471 (573)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHHCSSCEEEEEHHHHHHHTCT-TCC-CSHHHHHHHHHHH-HHHHHHHHHTTCE
T ss_pred cceEEEeecCCCCCHHHHHHHHHHHhcccCCceEEEECcHHHHHHhcc-ccC-CChhHHHHHHHHH-HHHHHHHHhCCCE
Confidence 467899999999999999999999987 44 5555654332111 000 0011111122221 1355566555666
Q ss_pred EEEcCCCCCcccCcHHHHHHHhc-C--cEEEEEcChhhh
Q 019172 259 VVATLGGQQGAAARADKWQHLYA-G--FTVWLSQTEAMG 294 (345)
Q Consensus 259 VIAtGGG~~~avlr~~~r~~L~~-G--~VV~Ld~s~a~~ 294 (345)
||++.-... ...+..+++.++. | .+|||+++.++.
T Consensus 472 VI~~~is~~-~~~R~~~r~l~~~~g~~~~V~Lda~~ev~ 509 (573)
T 1m8p_A 472 VIAAPIAPY-EESRKFARDAVSQAGSFFLVHVATPLEHC 509 (573)
T ss_dssp EEEECCCCC-HHHHHHHHHHHHTTSEEEEEEECCCHHHH
T ss_pred EEEEcCCCc-HHHHHHHHHHHHhcCCeEEEEEeCCHHHH
Confidence 776533100 0123445555553 6 799999998865
No 93
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=98.58 E-value=3.8e-08 Score=83.27 Aligned_cols=87 Identities=17% Similarity=0.368 Sum_probs=71.3
Q ss_pred CCcceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeeccCCccceeeeccccccccCCCceeeecccceeeh
Q 019172 77 NTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVIN 156 (345)
Q Consensus 77 ~~~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~~~~~~ 156 (345)
.+++|.|+|+..||.++|+||. ...++++.|++...+|.|++++.. +++ ..||..|.|.++.|.+.+..+.+.
T Consensus 3 ~~~~y~W~Qt~~~V~i~I~lp~--~~~~kdv~V~i~~~~l~v~~~g~~----~~~-~~L~~~I~~e~S~w~i~~~kv~i~ 75 (131)
T 2o30_A 3 SEAKYTWDQELNEINIQFPVTG--DADSSAIKIRMVGKKICVKNQGEI----VID-GELLHEVDVSSLWWVINGDVVDVN 75 (131)
T ss_dssp --CCCEEEEETTEEEEEEECC-----CCSCEEEEEETTEEEEEETTEE----EEE-EEBSSCEEEEEEEEEEETTEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCC--CCCccceEEEEECCEEEEEECCEe----eEc-cccccccccccCEEEEeCCEEEEE
Confidence 4679999999999999999975 246889999999999999987542 566 899999999999999999889999
Q ss_pred ccccCCCCCcchhHh
Q 019172 157 LKKQDPELKWPDIVE 171 (345)
Q Consensus 157 ~k~~~~~~~~~~~~~ 171 (345)
++|. ...-|+.+..
T Consensus 76 L~K~-~~~~W~~L~~ 89 (131)
T 2o30_A 76 VTKK-RNEWWDSLLV 89 (131)
T ss_dssp EEES-SCCCCSCSBC
T ss_pred EEEC-CCCCCccccC
Confidence 9887 4455787754
No 94
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=98.52 E-value=2.5e-07 Score=83.94 Aligned_cols=33 Identities=21% Similarity=0.121 Sum_probs=28.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC--CceeeC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG--YTPLST 217 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg--~~fID~ 217 (345)
.++.|+|.|++||||||+++.|++.|+ +.++.+
T Consensus 25 ~g~~i~i~G~~GsGKsT~~~~l~~~l~~~~~~~~~ 59 (229)
T 4eaq_A 25 MSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMT 59 (229)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHTTTSCEEEE
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCceee
Confidence 578899999999999999999999996 566654
No 95
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=98.52 E-value=9.3e-08 Score=97.71 Aligned_cols=90 Identities=13% Similarity=0.046 Sum_probs=59.7
Q ss_pred hhHHHHHHhhh-hhcCCceEEEEcCCCCChHHHHHHHHHhhCC-------ceeeCcHHHHHHHcCchhhhhhccChHHHH
Q 019172 171 ESWESLTAGSM-QLLKGTSIFLVGDSTEVNEKVALELAVGLGY-------TPLSTKELLETFAKQTIDSWMLAEGSDSVV 242 (345)
Q Consensus 171 ~~~~~l~a~~~-~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~-------~fID~D~lIE~~~g~sI~ei~~~~Gee~FR 242 (345)
+.|+.+.+... ..-+++.|+|+|+|||||||||+.||++|+. .|+|+|. . .+ -
T Consensus 379 eV~~vLr~~~~~~~~~~~~I~l~GlsGsGKSTIa~~La~~L~~~~g~r~~~~lDgD~--~-------~e-------i--- 439 (511)
T 1g8f_A 379 EVVKILRESNPPRPKQGFSIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHNN--K-------TE-------L--- 439 (511)
T ss_dssp HHHHHHHHHSCCGGGCCEEEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCCTT--C-------HH-------H---
T ss_pred hhHHHHHHhcccccccceEEEecccCCCCHHHHHHHHHHHHHHhhcCcceEEecCCC--c-------HH-------H---
Confidence 44555555321 2335789999999999999999999999997 7999998 1 00 0
Q ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCcccCcHHHHHHHhcCcEEEEE
Q 019172 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288 (345)
Q Consensus 243 elE~~vL~~L~~~~~~VIAtGGG~~~avlr~~~r~~L~~G~VV~Ld 288 (345)
..++..+.+...+||++.-- . ..+|+.++.|.+++|.
T Consensus 440 ---~~va~~~~~~G~~Vv~~~~s----p--~~~R~~l~~g~fv~v~ 476 (511)
T 1g8f_A 440 ---LSLIQDFIGSGSGLIIPDQW----E--DDKDSVVGKQNVYLLD 476 (511)
T ss_dssp ---HTTHHHHHHTTCEEEESSCC----C--GGGGGGSCCTTEEEEE
T ss_pred ---HHHHHHHHhcCCeEEEecCC----H--HHHHHHhcCCCEEEEe
Confidence 11223344444555554321 2 4678888777788887
No 96
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=98.47 E-value=2.7e-07 Score=94.52 Aligned_cols=101 Identities=14% Similarity=0.131 Sum_probs=60.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCC-----ceeeCcHHHHHHHcCchhhhhh-ccChHHHHHHHHHHHHHHhcCCCE
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGY-----TPLSTKELLETFAKQTIDSWML-AEGSDSVVNGECDVLESLSSHVRA 258 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~-----~fID~D~lIE~~~g~sI~ei~~-~~Gee~FRelE~~vL~~L~~~~~~ 258 (345)
.++.|+|+|++||||||+|+.|++.|+. .++|.|.+.+...+. ..|. .+....++.+. .+.+.+.+....
T Consensus 371 ~~~~I~l~G~~GsGKSTia~~La~~L~~~G~~~~~ld~D~ir~~l~~~---~~f~~~er~~~l~~i~-~~~~~~l~~G~~ 446 (546)
T 2gks_A 371 QGFCVWLTGLPCAGKSTIAEILATMLQARGRKVTLLDGDVVRTHLSRG---LGFSKEDRITNILRVG-FVASEIVKHNGV 446 (546)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECHHHHHHHTCTT---CCSSHHHHHHHHHHHH-HHHHHHHHTTCE
T ss_pred cceEEEccCCCCCCHHHHHHHHHHHhhhcCCeEEEECchHhhhhhccc---ccccHHHHHHHHHHHH-HHHHHHHhCCCE
Confidence 4678999999999999999999999974 899999865432221 0011 11111111111 123344444455
Q ss_pred EEEcCCCCCcccCcHHHHHHH----h-cC-cEEEEEcChhhh
Q 019172 259 VVATLGGQQGAAARADKWQHL----Y-AG-FTVWLSQTEAMG 294 (345)
Q Consensus 259 VIAtGGG~~~avlr~~~r~~L----~-~G-~VV~Ld~s~a~~ 294 (345)
||..+. ...+..|+.+ + .+ .+|||+++.++.
T Consensus 447 VI~d~~-----~~~~~~r~~~~~~l~~~d~~vV~L~~~~e~~ 483 (546)
T 2gks_A 447 VICALV-----SPYRSARNQVRNMMEEGKFIEVFVDAPVEVC 483 (546)
T ss_dssp EEEECC-----CCCHHHHHHHHTTSCTTCEEEEEEECCGGGH
T ss_pred EEEEcC-----CCCHHHHHHHHHHhhcCCEEEEEEeCCHHHH
Confidence 665533 2344444433 2 25 799999998865
No 97
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=98.33 E-value=2.7e-07 Score=78.97 Aligned_cols=40 Identities=23% Similarity=0.269 Sum_probs=34.8
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCc--eeeCcHHHHH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYT--PLSTKELLET 223 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~--fID~D~lIE~ 223 (345)
.++..|+|+|++||||||+++.||..++.. ++|+|++.+.
T Consensus 7 ~~g~~i~l~G~~GsGKSTl~~~La~~~~~g~i~i~~d~~~~~ 48 (191)
T 1zp6_A 7 LGGNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGY 48 (191)
T ss_dssp CTTEEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHhccCCCeEEEcccchhhh
Confidence 357889999999999999999999988766 8899997654
No 98
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=98.30 E-value=1.4e-06 Score=84.59 Aligned_cols=80 Identities=15% Similarity=0.090 Sum_probs=60.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHH--------------HHHHHcCc-----hhhhhhccChHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKEL--------------LETFAKQT-----IDSWMLAEGSDSVVNGE 245 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~l--------------IE~~~g~s-----I~ei~~~~Gee~FRelE 245 (345)
++..|+|+|++|+||||++..||+.++..+|++|.. -++..|.+ +.++-+......|.+.-
T Consensus 2 ~~~~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~QvYr~~~igTakp~~~E~~gvphhlid~~~~~e~~s~~~F~~~a 81 (322)
T 3exa_A 2 KEKLVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQDLA 81 (322)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHTTTEEEEECCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHHHHHH
T ss_pred CCcEEEEECCCcCCHHHHHHHHHHhCccceeecCcccceeeeeecCCCCCHHHHcCCCEEEeccCChhhhccHHHHHHHH
Confidence 456789999999999999999999999999999986 12333321 23344455666788877
Q ss_pred HHHHHHHhcCCCEEEEcCC
Q 019172 246 CDVLESLSSHVRAVVATLG 264 (345)
Q Consensus 246 ~~vL~~L~~~~~~VIAtGG 264 (345)
...++++.+.++.+|-+||
T Consensus 82 ~~~i~~i~~~gk~pIlVGG 100 (322)
T 3exa_A 82 TPLITEIHERGRLPFLVGG 100 (322)
T ss_dssp HHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHhCCCcEEEEcC
Confidence 7888888777777777776
No 99
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=98.26 E-value=8.1e-07 Score=82.09 Aligned_cols=40 Identities=20% Similarity=0.152 Sum_probs=36.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETF 224 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lIE~~ 224 (345)
+++.|+|+|++||||||+++.||+.||++++|.|.++...
T Consensus 8 ~~~~i~i~G~~GsGKsTla~~la~~lg~~~~d~g~~~r~~ 47 (233)
T 3r20_A 8 GSLVVAVDGPAGTGKSSVSRGLARALGARYLDTGAMYRIA 47 (233)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCCcccCCcHHHHH
Confidence 4578999999999999999999999999999999987653
No 100
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.21 E-value=4.5e-06 Score=65.15 Aligned_cols=86 Identities=19% Similarity=0.329 Sum_probs=71.9
Q ss_pred cceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeeccCCccceeeeccccccccCCCceeeecccceeehcc
Q 019172 79 SQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLK 158 (345)
Q Consensus 79 ~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~~~~~~~k 158 (345)
.+|.|.|+..++.+.|++++. .++++.|++.+.+|.|++.+.....-.++ -.||..|.|.++.|.+.+..+.+.++
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v---~~~~v~v~~~~~~l~v~~~~~~~~~y~~~-~~L~~~I~~~~s~~~~~~~~l~i~L~ 78 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGI---PKQNVNIDFGEQILSVVIEVPGEDAYYLQ-PRLFGKIIPDKCKYEVLSTKIEICLA 78 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSC---CGGGEEEEECSSBEEEEECCTTSCCEEEC-CBBSSCBCGGGCEEEECSSCEEEEEE
T ss_pred ccccEEeCCCEEEEEEEECCC---ChHHeEEEEECCEEEEEEEcCCCcEEEEe-eEcCCccCchhEEEEEECCEEEEEEE
Confidence 589999999999999999872 46799999999999999886543333455 68999999999999999999999999
Q ss_pred ccCCCCCcchh
Q 019172 159 KQDPELKWPDI 169 (345)
Q Consensus 159 ~~~~~~~~~~~ 169 (345)
|.... .|+.+
T Consensus 79 K~~~~-~W~~L 88 (92)
T 2xcm_C 79 KADII-TWASL 88 (92)
T ss_dssp BSSSC-CCSCS
T ss_pred cCCCC-cchhc
Confidence 97764 77765
No 101
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=98.15 E-value=5.4e-06 Score=76.08 Aligned_cols=29 Identities=14% Similarity=0.029 Sum_probs=22.7
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
..+++-|+|.|++||||||+++.|++.|+
T Consensus 22 m~~g~~I~~eG~~GsGKsT~~~~l~~~l~ 50 (227)
T 3v9p_A 22 MARGKFITFEGIDGAGKTTHLQWFCDRLQ 50 (227)
T ss_dssp -CCCCEEEEECCC---CHHHHHHHHHHHH
T ss_pred ccCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 34688899999999999999999999993
No 102
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.10 E-value=8.6e-06 Score=66.41 Aligned_cols=90 Identities=16% Similarity=0.301 Sum_probs=74.3
Q ss_pred CCcceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeeccCCccceeeeccccccccCCCceeeecccceeeh
Q 019172 77 NTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVIN 156 (345)
Q Consensus 77 ~~~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~~~~~~ 156 (345)
+..+|.|.|+..+|.+.|++|+ ..++++.|++.+.+|.|++.......-.++ -.||..|.|.++.|.+.+..+.+.
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~---v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~-~~L~~~I~~e~s~~~~~~~~l~i~ 83 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKN---VQKNDVNVEFSEKELSALVKLPSGEDYNLK-LELLHPIIPEQSTFKVLSTKIEIK 83 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCS---CCGGGEEEECSSSCEEEEEECTTSSEEEEE-ECBSSCCCGGGEEEEECSSSEEEE
T ss_pred CCCCccEEeCCCEEEEEEEeCC---CCHHHCEEEEEcCEEEEEEEeCCCcEEEEE-eeCCCcCCccccEEEEECCEEEEE
Confidence 4568999999999999999997 246799999999999999876433333455 689999999999999999999999
Q ss_pred ccccCCCCCcchhHh
Q 019172 157 LKKQDPELKWPDIVE 171 (345)
Q Consensus 157 ~k~~~~~~~~~~~~~ 171 (345)
++|...+ .|+.+..
T Consensus 84 L~K~~~~-~W~~L~~ 97 (114)
T 1rl1_A 84 LKKPEAV-RWEKLEG 97 (114)
T ss_dssp EECSSCC-CCSSSBT
T ss_pred EEcCCCC-cCccccc
Confidence 9997765 7887643
No 103
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=98.08 E-value=6.2e-06 Score=79.88 Aligned_cols=79 Identities=18% Similarity=0.158 Sum_probs=58.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHH--------------HHHHHcC-----chhhhhhccChHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKEL--------------LETFAKQ-----TIDSWMLAEGSDSVVNGEC 246 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~l--------------IE~~~g~-----sI~ei~~~~Gee~FRelE~ 246 (345)
+..|+|+|++|+|||||+..||+.++..+|+.|.. -++..|. ++.++-+......|.+.-.
T Consensus 10 ~~~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~qvY~~~~igTakp~~~E~~~v~hhlid~~~~~e~~s~~~f~~~a~ 89 (316)
T 3foz_A 10 PKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDAL 89 (316)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHSCEEEEECCTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHHHH
T ss_pred CcEEEEECCCccCHHHHHHHHHHhCCCcEEecccccccccccccCCCCCHHHHcCCCEEEeccCCccccccHHHHHHHHH
Confidence 45688999999999999999999999999999985 1233331 2233444556667888777
Q ss_pred HHHHHHhcCCCEEEEcCC
Q 019172 247 DVLESLSSHVRAVVATLG 264 (345)
Q Consensus 247 ~vL~~L~~~~~~VIAtGG 264 (345)
..++++.+.++..|-+||
T Consensus 90 ~~i~~i~~~g~~pilVGG 107 (316)
T 3foz_A 90 AEMADITAAGRIPLLVGG 107 (316)
T ss_dssp HHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHhCCCcEEEEcC
Confidence 788888777776666666
No 104
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=98.03 E-value=5.7e-06 Score=82.63 Aligned_cols=78 Identities=12% Similarity=0.157 Sum_probs=58.9
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHH--------------HHHHHcC-----chhhhhhccChHHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKEL--------------LETFAKQ-----TIDSWMLAEGSDSVVNGECD 247 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~l--------------IE~~~g~-----sI~ei~~~~Gee~FRelE~~ 247 (345)
..|+|+|++|+|||||+..||+.++..+|++|.. .++..|. ++.++-+......|.+....
T Consensus 3 ~~i~i~GptgsGKttla~~La~~~~~~iis~Ds~QvYr~l~i~T~kp~~~E~~gv~hhlid~~~~~~~~s~~~F~~~a~~ 82 (409)
T 3eph_A 3 KVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMN 82 (409)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHHTEEEEECCTTTTBSSCTTTTTCCCGGGTTTCCEESCSCBCTTSCCCHHHHHHHHHH
T ss_pred cEEEEECcchhhHHHHHHHHHHHCCCeEeecCccceecccccccCCCCHHHHcCchhhcCCccChHhHhhHHHHHHHHHH
Confidence 4688999999999999999999999999999984 1122221 12233345566788888888
Q ss_pred HHHHHhcCCCEEEEcCC
Q 019172 248 VLESLSSHVRAVVATLG 264 (345)
Q Consensus 248 vL~~L~~~~~~VIAtGG 264 (345)
+++++...++.+|-+||
T Consensus 83 ~i~~i~~~g~~pilVGG 99 (409)
T 3eph_A 83 AIEDIHRRGKIPIVVGG 99 (409)
T ss_dssp HHHHHHTTTCEEEEECS
T ss_pred HHHHHHhcCCCEEEECC
Confidence 88998887777776776
No 105
>1dek_A Deoxynucleoside monophosphate kinase; transferase, phosphotransferase; HET: DGP; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 PDB: 1del_A*
Probab=98.02 E-value=4.3e-05 Score=70.83 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=30.7
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELL 221 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lI 221 (345)
+.|.|+|.+||||||+++.|++.+|++.+...+.+
T Consensus 2 ~~i~ltG~~~sGK~tv~~~l~~~~g~~~~~~~~~~ 36 (241)
T 1dek_A 2 KLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPI 36 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHSCEEECCTTHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHhcCCeEEecChHH
Confidence 35889999999999999999999999998876543
No 106
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=97.86 E-value=4.1e-05 Score=69.09 Aligned_cols=28 Identities=21% Similarity=0.100 Sum_probs=25.4
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
++++-|+|.|++||||||+++.|++.|+
T Consensus 4 m~g~~i~~eG~~gsGKsT~~~~l~~~l~ 31 (213)
T 4edh_A 4 MTGLFVTLEGPEGAGKSTNRDYLAERLR 31 (213)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 5688899999999999999999999985
No 107
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=97.83 E-value=1e-05 Score=71.37 Aligned_cols=27 Identities=22% Similarity=0.122 Sum_probs=24.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..|+|+|++||||||+++.|+..+.
T Consensus 7 ~g~~i~l~GpsGsGKsTl~~~L~~~~~ 33 (208)
T 3tau_A 7 RGLLIVLSGPSGVGKGTVREAVFKDPE 33 (208)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHSTT
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCC
Confidence 467899999999999999999999884
No 108
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=97.79 E-value=8.3e-05 Score=67.26 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=24.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
+++-|+|.|++||||||+++.|++.|.
T Consensus 2 ~g~~i~~eG~~gsGKsT~~~~l~~~l~ 28 (213)
T 4tmk_A 2 RSKYIVIEGLEGAGKTTARNVVVETLE 28 (213)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 578899999999999999999999884
No 109
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=97.75 E-value=1.3e-05 Score=69.82 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=34.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC--CceeeCcHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG--YTPLSTKELLE 222 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg--~~fID~D~lIE 222 (345)
++..|.|+|++||||||+++.|+..++ +.+++.|.++.
T Consensus 5 ~~~~i~i~G~~GsGKSTl~~~l~~~~~~~i~~v~~d~~~~ 44 (211)
T 3asz_A 5 KPFVIGIAGGTASGKTTLAQALARTLGERVALLPMDHYYK 44 (211)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHGGGEEEEEGGGCBC
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHHhCCCeEEEecCcccc
Confidence 467799999999999999999999999 99999998653
No 110
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.74 E-value=3.5e-05 Score=64.45 Aligned_cols=84 Identities=23% Similarity=0.351 Sum_probs=69.4
Q ss_pred ceEEeecccceeeeeeecCcccccccceeEecCCceEEEEeec-cCCccceeeeccccccccCCCceeeecccceeehcc
Q 019172 80 QYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNR-SGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLK 158 (345)
Q Consensus 80 ~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls-~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~~~~~~~k 158 (345)
.|.|.|+..+|.++|++++ .+++.|++..++|.|++.+ .....-.++ -.||..|.|.++.|.+-+..+.+.|+
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~-----~~~~~V~~~~~~l~~~~~~~~~~~~y~~~-l~L~~~I~~e~S~~~v~~~kiei~L~ 78 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVED-----SKDVNVNFEKSKLTFSCLGGSDNFKHLNE-IDLFHCIDPNDSKHKRTDRSILCCLR 78 (125)
T ss_dssp CEEEEECSSEEEEEECCTT-----EEEEEEEEETTEEEEEEEETTTTEEEEEE-EEBSSCEEEEEEEEEECSSCEEEEEE
T ss_pred ceeEEeCCCEEEEEEEecC-----CCceEEEEECCEEEEEEEeCCCCceEEEE-EEccceeccccCEEEECCCEEEEEEE
Confidence 8999999999999999998 5799999999999999875 222334455 68999999999999998888999999
Q ss_pred ccCCCCCcchh
Q 019172 159 KQDPELKWPDI 169 (345)
Q Consensus 159 ~~~~~~~~~~~ 169 (345)
|......||.+
T Consensus 79 K~~~~~~W~rL 89 (125)
T 1ejf_A 79 KGESGQSWPRL 89 (125)
T ss_dssp ESSTTCCCSSS
T ss_pred ECCCCCCCCce
Confidence 87654566665
No 111
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=97.72 E-value=1.2e-05 Score=69.23 Aligned_cols=28 Identities=11% Similarity=0.065 Sum_probs=24.9
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
+.++.|+|+|++||||||+.+.|+..+.
T Consensus 3 ~~g~~i~i~GpsGsGKSTL~~~L~~~~~ 30 (180)
T 1kgd_A 3 HMRKTLVLLGAHGVGRRHIKNTLITKHP 30 (180)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4678899999999999999999998763
No 112
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=97.71 E-value=9.1e-05 Score=68.25 Aligned_cols=31 Identities=10% Similarity=0.018 Sum_probs=25.7
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
..++++-|+|.|++||||||+++.|++.|+.
T Consensus 23 ~~~~~~~i~~eG~~GsGKsT~~~~l~~~l~~ 53 (236)
T 3lv8_A 23 NAMNAKFIVIEGLEGAGKSTAIQVVVETLQQ 53 (236)
T ss_dssp ---CCCEEEEEESTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 3456788999999999999999999999853
No 113
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=97.68 E-value=0.0001 Score=66.45 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=26.5
Q ss_pred hhhhcCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 180 ~~~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.++.++++.|+|+|++|+|||||.+.|++.+.
T Consensus 13 ~~~~~~g~~ivl~GPSGaGKsTL~~~L~~~~~ 44 (197)
T 3ney_A 13 NLYFQGRKTLVLIGASGVGRSHIKNALLSQNP 44 (197)
T ss_dssp ---CCSCCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred cCCCCCCCEEEEECcCCCCHHHHHHHHHhhCC
Confidence 34567889999999999999999999998864
No 114
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=97.64 E-value=6.7e-05 Score=68.25 Aligned_cols=32 Identities=9% Similarity=0.014 Sum_probs=28.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh-CCceee
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL-GYTPLS 216 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L-g~~fID 216 (345)
+++.|+|.|.+||||||+++.||+.| ++.++.
T Consensus 23 ~~~~I~ieG~~GsGKST~~~~L~~~l~~~~~i~ 55 (263)
T 1p5z_B 23 RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVP 55 (263)
T ss_dssp CCEEEEEECSTTSSHHHHHTTTGGGCTTEEEEC
T ss_pred CceEEEEECCCCCCHHHHHHHHHHhcCCCEEEe
Confidence 46789999999999999999999999 677774
No 115
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=97.63 E-value=2.5e-05 Score=78.56 Aligned_cols=50 Identities=16% Similarity=0.256 Sum_probs=37.5
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH--HHHH-HHcCchhhhh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE--LLET-FAKQTIDSWM 233 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~--lIE~-~~g~sI~ei~ 233 (345)
....+|+|+|++|+||||+|+.||+.++++|++.|. +.+. ..|.....++
T Consensus 48 ~~~~~iLl~GppGtGKT~lar~lA~~l~~~~~~v~~~~~~~~g~vG~d~e~~l 100 (444)
T 1g41_A 48 VTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSII 100 (444)
T ss_dssp CCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CCCCTHHHH
T ss_pred cCCceEEEEcCCCCCHHHHHHHHHHHcCCCceeecchhhcccceeeccHHHHH
Confidence 346789999999999999999999999999998874 3332 3454444333
No 116
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=97.62 E-value=1.5e-05 Score=75.08 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=30.2
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKELL 221 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~lI 221 (345)
...|.|.|++||||||+++.|++.|| +++||+|++.
T Consensus 5 ~~iIgItG~sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~ 45 (290)
T 1a7j_A 5 HPIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFH 45 (290)
T ss_dssp SCEEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGGB
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHhhcCCCeeEeecchhh
Confidence 45689999999999999999999998 8999999986
No 117
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=97.58 E-value=0.00014 Score=61.95 Aligned_cols=40 Identities=20% Similarity=0.288 Sum_probs=33.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh----C--CceeeCcHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL----G--YTPLSTKELLETF 224 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L----g--~~fID~D~lIE~~ 224 (345)
.+..++|+|++|+||||+++.++..+ | ..+++.+++++..
T Consensus 37 ~g~~~~l~G~~G~GKTtL~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 82 (180)
T 3ec2_A 37 EGKGLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFRL 82 (180)
T ss_dssp GCCEEEECCSSSSSHHHHHHHHHHHHHHHSCCCCCEEEHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHH
Confidence 47899999999999999999999887 4 4567777776653
No 118
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=97.57 E-value=9.7e-05 Score=66.41 Aligned_cols=33 Identities=12% Similarity=0.100 Sum_probs=30.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
+.+|+|+|++|+||||+++.+|..++.+++..+
T Consensus 45 ~~~vll~G~~GtGKT~la~~la~~~~~~~~~i~ 77 (257)
T 1lv7_A 45 PKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 77 (257)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHTCCEEEEC
T ss_pred CCeEEEECcCCCCHHHHHHHHHHHcCCCEEEEe
Confidence 568999999999999999999999999888765
No 119
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.50 E-value=0.00013 Score=62.44 Aligned_cols=89 Identities=10% Similarity=0.126 Sum_probs=70.8
Q ss_pred CCcceEEeec-ccceeeeeeecCcccccccceeEecCCceEEEEeeccCCc------------cceeeeccccccccCCC
Q 019172 77 NTSQYEFSDG-SAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF------------ITLIETNQLFDKIKPTE 143 (345)
Q Consensus 77 ~~~~y~~~~~-~~Ele~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~~~------------~tlIe~k~l~~~i~p~E 143 (345)
...+|.|.|+ ..+|.+.|++++ ....++.|++...+|.|.+...... .-.++ -.||..|.|.+
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~---v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~-~~L~~~I~pe~ 93 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKE---ICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQ-VKLRNLIEPEQ 93 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCS---BCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEE-EEBSSCEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCC---CCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEe-ccccccCCchh
Confidence 3559999999 999999999986 3357899999999999988754321 22233 56999999999
Q ss_pred ceeeecccceeehccccCCCCCcchhH
Q 019172 144 TIWYIDEDQLVINLKKQDPELKWPDIV 170 (345)
Q Consensus 144 tiw~~Dd~~~~~~~k~~~~~~~~~~~~ 170 (345)
+.|.+.+..+.|.|+|.+. ..|+.+.
T Consensus 94 S~~~v~~~kIeI~L~K~e~-~~W~~L~ 119 (134)
T 1wh0_A 94 CTFCFTASRIDICLRKRQS-QRWGGLE 119 (134)
T ss_dssp EEEEECSSEEEEEEEESSS-CCCSCSB
T ss_pred CEEEEeCCEEEEEEEECCC-Ccccccc
Confidence 9999999999999998753 5777653
No 120
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=97.49 E-value=0.00058 Score=61.09 Aligned_cols=29 Identities=21% Similarity=0.153 Sum_probs=24.6
Q ss_pred eEEEEcCCCCChHHHHHHHHHhh--CCceee
Q 019172 188 SIFLVGDSTEVNEKVALELAVGL--GYTPLS 216 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~L--g~~fID 216 (345)
=|+|-|..||||||.++.|++.| |++++-
T Consensus 4 FI~~EG~dGsGKsTq~~~L~~~L~~~~~v~~ 34 (205)
T 4hlc_A 4 FITFEGPEGSGKTTVINEVYHRLVKDYDVIM 34 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHTTTSCEEE
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHCCCCEEE
Confidence 37888999999999999999999 555553
No 121
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=97.45 E-value=0.00013 Score=70.29 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=29.7
Q ss_pred eEEEEcCCCCChHHHHHHHHHhhC-------CceeeCcHHH
Q 019172 188 SIFLVGDSTEVNEKVALELAVGLG-------YTPLSTKELL 221 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~Lg-------~~fID~D~lI 221 (345)
.|.|+|++||||||+++.|+..++ ..++..|.+.
T Consensus 94 iigI~GpsGSGKSTl~~~L~~ll~~~~~~~~v~~i~~D~f~ 134 (321)
T 3tqc_A 94 IIGIAGSVAVGKSTTSRVLKALLSRWPDHPNVEVITTDGFL 134 (321)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGB
T ss_pred EEEEECCCCCCHHHHHHHHHHHhcccCCCCeEEEEeecccc
Confidence 688999999999999999999986 5568888863
No 122
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=97.42 E-value=0.0011 Score=58.79 Aligned_cols=28 Identities=21% Similarity=0.048 Sum_probs=24.4
Q ss_pred EEEEcCCCCChHHHHHHHHHhh---CCceee
Q 019172 189 IFLVGDSTEVNEKVALELAVGL---GYTPLS 216 (345)
Q Consensus 189 IvLIG~~GSGKSTVAk~LA~~L---g~~fID 216 (345)
|+|-|.-||||||.++.|++.| |++++-
T Consensus 3 I~~EG~DGsGKsTq~~~L~~~L~~~g~~v~~ 33 (197)
T 3hjn_A 3 ITFEGIDGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEE
Confidence 7889999999999999999988 666663
No 123
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=97.42 E-value=8.3e-05 Score=63.82 Aligned_cols=27 Identities=26% Similarity=0.127 Sum_probs=24.7
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..++.|+|+|++||||||+++.|+..+
T Consensus 4 ~~g~~i~l~G~~GsGKSTl~~~L~~~~ 30 (207)
T 2j41_A 4 EKGLLIVLSGPSGVGKGTVRKRIFEDP 30 (207)
T ss_dssp CCCCEEEEECSTTSCHHHHHHHHHHCT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 357889999999999999999999987
No 124
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=97.37 E-value=0.00012 Score=66.04 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=32.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCc----------eeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYT----------PLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~----------fID~D~lI 221 (345)
.+..|.|+|++||||||+++.|+..+|.. +++.|.+.
T Consensus 24 ~g~iigI~G~~GsGKSTl~k~L~~~lG~~~~~~~~~~i~~v~~d~~~ 70 (245)
T 2jeo_A 24 RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFY 70 (245)
T ss_dssp CSEEEEEECSTTSSHHHHHHHHHHHHTGGGSCGGGCSEEEEEGGGGB
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhchhcccccCCceEEEeCCcCc
Confidence 46679999999999999999999999976 78888653
No 125
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=97.35 E-value=8.3e-05 Score=64.18 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=22.1
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
+.|.|+|++||||||+.++|+..+.
T Consensus 2 ~ii~l~GpsGaGKsTl~~~L~~~~~ 26 (186)
T 3a00_A 2 RPIVISGPSGTGKSTLLKKLFAEYP 26 (186)
T ss_dssp CCEEEESSSSSSHHHHHHHHHHHCG
T ss_pred CEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4688999999999999999997753
No 126
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=97.34 E-value=0.00013 Score=69.41 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=32.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~ 219 (345)
.+.+|+|.|++|+|||++|+.+|+.++.+|+..+-
T Consensus 50 ~~~~vll~GppGtGKT~la~~ia~~~~~~~~~~~~ 84 (363)
T 3hws_A 50 GKSNILLIGPTGSGKTLLAETLARLLDVPFTMADA 84 (363)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHcCCCEEEech
Confidence 46789999999999999999999999999998764
No 127
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=97.32 E-value=0.00016 Score=64.29 Aligned_cols=34 Identities=15% Similarity=0.045 Sum_probs=30.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.+|+|.|++|+|||++++.+|..++.+++..+
T Consensus 38 ~~~~vll~G~~GtGKT~la~~la~~~~~~~~~~~ 71 (262)
T 2qz4_A 38 VPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMA 71 (262)
T ss_dssp CCCEEEEESCTTSSHHHHHHHHHHHHTCCEEEEE
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHhCCCEEEec
Confidence 4578999999999999999999999999987643
No 128
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=97.32 E-value=0.00023 Score=66.22 Aligned_cols=41 Identities=20% Similarity=0.164 Sum_probs=34.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc--HHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK--ELLETFA 225 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D--~lIE~~~ 225 (345)
.+..|+|.|++|+|||++++.+|..++.+|+..+ ++..+..
T Consensus 48 ~~~~vLL~Gp~GtGKT~la~ala~~~~~~~i~v~~~~l~~~~~ 90 (301)
T 3cf0_A 48 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 90 (301)
T ss_dssp CCSEEEEECSSSSSHHHHHHHHHHHTTCEEEEECHHHHHHHHH
T ss_pred CCceEEEECCCCcCHHHHHHHHHHHhCCCEEEEEhHHHHhhhc
Confidence 4678999999999999999999999999998766 4444333
No 129
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=97.32 E-value=0.00015 Score=67.73 Aligned_cols=33 Identities=9% Similarity=0.027 Sum_probs=30.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
+..++|.|++|+|||++|+.+|+.+|++|+..+
T Consensus 36 p~~lLl~GppGtGKT~la~aiA~~l~~~~i~v~ 68 (293)
T 3t15_A 36 PLILGIWGGKGQGKSFQCELVFRKMGINPIMMS 68 (293)
T ss_dssp CSEEEEEECTTSCHHHHHHHHHHHHTCCCEEEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCEEEEe
Confidence 467888999999999999999999999998876
No 130
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.00067 Score=67.61 Aligned_cols=34 Identities=12% Similarity=0.080 Sum_probs=31.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.++.|+|.|+||+|||.+|+++|..+|++|+..+
T Consensus 181 ~prGvLL~GPPGTGKTllAkAiA~e~~~~f~~v~ 214 (405)
T 4b4t_J 181 QPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVS 214 (405)
T ss_dssp CCCCEEEESCSSSSHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCceEEeCCCCCCHHHHHHHHHHhhCCCceEEE
Confidence 3678999999999999999999999999998765
No 131
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.0002 Score=60.85 Aligned_cols=87 Identities=14% Similarity=0.296 Sum_probs=65.3
Q ss_pred CcceEEeecccc-------eeeeeeecCcccccccceeEecCCceEEEEeeccC------CccceeeeccccccccCCCc
Q 019172 78 TSQYEFSDGSAE-------IELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSG------SFITLIETNQLFDKIKPTET 144 (345)
Q Consensus 78 ~~~y~~~~~~~E-------le~rl~l~~~~~~~sr~i~I~~~d~~L~~~vls~~------~~~tlIe~k~l~~~i~p~Et 144 (345)
++.|.|.|+.++ |.++|++++ .+++.|++...+|.|++.+.+ ...-.++ -.||..|.|.++
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~-----~~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~-l~L~~~Idpe~S 79 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIAD-----CDAPELTIKPSYIELKAQSKPHVGDENVHHYQLH-IDLYKEIIPEKT 79 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSS-----EESCCCCBCSSEEEECCEEC-------CEEBCEE-EECSSCCCSSSE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecC-----CCceEEEEECCEEEEEEecccccCCccCceEEEE-EEChhhcccccc
Confidence 568999999999 999999998 458999998999999887754 1223444 579999999999
Q ss_pred eeeecccc-eeehccccCC-CCCcchhH
Q 019172 145 IWYIDEDQ-LVINLKKQDP-ELKWPDIV 170 (345)
Q Consensus 145 iw~~Dd~~-~~~~~k~~~~-~~~~~~~~ 170 (345)
.|.+-... +.+.|+|... +..||.+.
T Consensus 80 ~~~v~~~~~vei~L~K~~~~~~~W~rL~ 107 (134)
T 2cg9_X 80 MHKVANGQHYFLKLYKKDLESEYWPRLT 107 (134)
T ss_dssp EEEECCC--CEEEEEECSSSSCCCSCSS
T ss_pred EEEECCCEEEEEEEEECCCCCCCCCcee
Confidence 99987777 8999998763 56777764
No 132
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=97.28 E-value=0.00058 Score=59.00 Aligned_cols=37 Identities=8% Similarity=-0.048 Sum_probs=30.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~lI 221 (345)
.+.+++|.|++|+||||+++.+|+.++ +.+++.+++.
T Consensus 51 ~~~~~ll~G~~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~ 92 (242)
T 3bos_A 51 GVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIHA 92 (242)
T ss_dssp SCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGG
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHH
Confidence 578999999999999999999999876 3566766654
No 133
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=97.27 E-value=0.00018 Score=63.11 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=32.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~lI 221 (345)
.+..|.|+|++||||||+++.|+..+. ..+|..|.+.
T Consensus 21 ~g~~v~I~G~sGsGKSTl~~~l~~~~~~~g~~~g~v~~d~~~ 62 (208)
T 3c8u_A 21 GRQLVALSGAPGSGKSTLSNPLAAALSAQGLPAEVVPMDGFH 62 (208)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHHHHTTCCEEEEESGGGB
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhcCCceEEEecCCCc
Confidence 567899999999999999999999986 6788888763
No 134
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=97.26 E-value=0.00018 Score=68.67 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=31.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~ 219 (345)
.+.+|+|+|++|+|||++|+.+|+.++.+|+..|.
T Consensus 71 ~~~~ill~Gp~GtGKT~la~~la~~l~~~~~~~~~ 105 (376)
T 1um8_A 71 SKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDA 105 (376)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEG
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHhCCCEEEecc
Confidence 46789999999999999999999999999987663
No 135
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=97.23 E-value=0.00059 Score=61.88 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=30.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
...+++|.|++|+|||++|+.+|+.++.+|+..+
T Consensus 63 ~~~~vLl~G~~GtGKT~la~~ia~~~~~~~~~i~ 96 (272)
T 1d2n_A 63 PLVSVLLEGPPHSGKTALAAKIAEESNFPFIKIC 96 (272)
T ss_dssp SEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEE
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHhCCCEEEEe
Confidence 3568999999999999999999999999988764
No 136
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=97.23 E-value=0.00025 Score=63.47 Aligned_cols=27 Identities=4% Similarity=-0.016 Sum_probs=24.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
++..|.|+|++||||||+++.|+..-|
T Consensus 19 ~g~~i~i~G~~GsGKSTl~~~L~~~~g 45 (230)
T 2vp4_A 19 QPFTVLIEGNIGSGKTTYLNHFEKYKN 45 (230)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGTT
T ss_pred CceEEEEECCCCCCHHHHHHHHHhccC
Confidence 577899999999999999999998833
No 137
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=97.23 E-value=0.00022 Score=61.22 Aligned_cols=27 Identities=15% Similarity=0.143 Sum_probs=24.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..|.|+|++||||||+++.|+..+.
T Consensus 6 ~g~ii~l~Gp~GsGKSTl~~~L~~~~~ 32 (205)
T 3tr0_A 6 KANLFIISAPSGAGKTSLVRALVKALA 32 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHSS
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCC
Confidence 567899999999999999999998864
No 138
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=97.22 E-value=0.00021 Score=65.22 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=30.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.+|+|.|++|+||||+++.+|..++.+|+..+
T Consensus 53 ~~~~vll~Gp~GtGKT~la~~la~~~~~~~~~i~ 86 (297)
T 3b9p_A 53 PAKGLLLFGPPGNGKTLLARAVATECSATFLNIS 86 (297)
T ss_dssp CCSEEEEESSSSSCHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEECcCCCCHHHHHHHHHHHhCCCeEEee
Confidence 3678999999999999999999999998887543
No 139
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=97.22 E-value=0.00022 Score=64.56 Aligned_cols=34 Identities=18% Similarity=0.086 Sum_probs=30.8
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLST 217 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~ 217 (345)
..+.+|+|.|++|+|||++++.+|..++.+++..
T Consensus 49 ~~~~~~ll~G~~GtGKT~la~~la~~~~~~~~~v 82 (285)
T 3h4m_A 49 EPPKGILLYGPPGTGKTLLAKAVATETNATFIRV 82 (285)
T ss_dssp CCCSEEEEESSSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCeEEEECCCCCcHHHHHHHHHHHhCCCEEEE
Confidence 3567899999999999999999999999998765
No 140
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=97.17 E-value=0.00027 Score=64.09 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=30.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.+++|.|++|+|||++++.+|+.++.+++..|
T Consensus 49 ~~~~vll~G~~GtGKT~la~~la~~l~~~~~~i~ 82 (310)
T 1ofh_A 49 TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVE 82 (310)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEE
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHhCCCEEEEc
Confidence 4678999999999999999999999998887543
No 141
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=97.16 E-value=0.00032 Score=57.82 Aligned_cols=26 Identities=15% Similarity=0.194 Sum_probs=24.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+.+++|+|++|+|||++++.+++.+
T Consensus 42 ~~~~~ll~G~~G~GKT~l~~~~~~~~ 67 (195)
T 1jbk_A 42 TKNNPVLIGEPGVGKTAIVEGLAQRI 67 (195)
T ss_dssp SSCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCceEEECCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999997
No 142
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=97.10 E-value=0.00028 Score=66.30 Aligned_cols=36 Identities=17% Similarity=0.063 Sum_probs=31.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-------CceeeCcHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-------YTPLSTKEL 220 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-------~~fID~D~l 220 (345)
.+..|.|+|++||||||+++.|+..++ ..++++|.+
T Consensus 79 ~g~iigI~G~~GsGKSTl~~~L~~~l~~~~~~G~i~vi~~d~~ 121 (308)
T 1sq5_A 79 IPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHhhCCCCCeEEEEecCCc
Confidence 456789999999999999999999887 677888875
No 143
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.00029 Score=70.45 Aligned_cols=34 Identities=9% Similarity=0.050 Sum_probs=31.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.++.|+|.|+||+|||++|+++|..+|++|+..+
T Consensus 205 ~prGiLL~GPPGtGKT~lakAiA~~~~~~~~~v~ 238 (428)
T 4b4t_K 205 PPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVN 238 (428)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHHHTCEEEEEE
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHhCCCeEEEe
Confidence 3678999999999999999999999999998775
No 144
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=97.10 E-value=0.00029 Score=58.37 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=29.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh----------CCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL----------GYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L----------g~~fID~D 218 (345)
...+++|+|++|+|||++++.+|+.+ +.+++..+
T Consensus 42 ~~~~vll~G~~G~GKT~la~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (187)
T 2p65_A 42 TKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLD 85 (187)
T ss_dssp SSCEEEEESCGGGCHHHHHHHHHHHHHTTCSCTTTTTCEEEEEC
T ss_pred CCCceEEECCCCCCHHHHHHHHHHHHHhcCCcchhcCCeEEEEe
Confidence 46789999999999999999999998 67666554
No 145
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.09 E-value=0.00051 Score=58.23 Aligned_cols=36 Identities=11% Similarity=0.225 Sum_probs=30.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh---C--CceeeCcHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL---G--YTPLSTKEL 220 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L---g--~~fID~D~l 220 (345)
.+..++|+|++|+||||+++.++..+ | .-|++..++
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~~i~~~~~~~g~~~~~~~~~~~ 75 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASM 75 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHHHHHHHHHTTTCCEEEEETTTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHhcCCcEEEEcHHHh
Confidence 67899999999999999999999988 6 456665544
No 146
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=97.07 E-value=0.00034 Score=58.18 Aligned_cols=31 Identities=13% Similarity=-0.103 Sum_probs=27.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh---CCcee
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL---GYTPL 215 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L---g~~fI 215 (345)
.+.+|+|.|.+|+|||++|+.++... +.+|+
T Consensus 23 ~~~~vll~G~~GtGKt~lA~~i~~~~~~~~~~~v 56 (145)
T 3n70_A 23 TDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFV 56 (145)
T ss_dssp CCSCEEEESSTTSSHHHHHHHHHHSSTTTTSCCE
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhCCccCCCEE
Confidence 56789999999999999999999986 66665
No 147
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=97.05 E-value=0.00043 Score=62.05 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=29.6
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.++|+|++|+||||+++.+|..++.+++..+
T Consensus 49 ~~g~ll~G~~G~GKTtl~~~i~~~~~~~~i~~~ 81 (254)
T 1ixz_A 49 PKGVLLVGPPGVGKTHLARAVAGEARVPFITAS 81 (254)
T ss_dssp CSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhCCCEEEee
Confidence 456999999999999999999999998887765
No 148
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=97.05 E-value=0.00069 Score=62.99 Aligned_cols=35 Identities=11% Similarity=0.013 Sum_probs=31.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~ 219 (345)
...+|+|.|++|+|||++++.+|+.++.+|+..+.
T Consensus 54 ~~~~vll~G~~GtGKT~la~~ia~~~~~~~~~~~~ 88 (338)
T 3pfi_A 54 CLDHILFSGPAGLGKTTLANIISYEMSANIKTTAA 88 (338)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHTTCCEEEEEG
T ss_pred CCCeEEEECcCCCCHHHHHHHHHHHhCCCeEEecc
Confidence 44689999999999999999999999999887754
No 149
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.00035 Score=70.08 Aligned_cols=34 Identities=15% Similarity=0.020 Sum_probs=31.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.++.|+|.||||+|||.+|+++|..+|++|+..+
T Consensus 214 ~prGvLLyGPPGTGKTllAkAiA~e~~~~f~~v~ 247 (434)
T 4b4t_M 214 APKGALMYGPPGTGKTLLARACAAQTNATFLKLA 247 (434)
T ss_dssp CCCEEEEESCTTSSHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCeeEEECcCCCCHHHHHHHHHHHhCCCEEEEe
Confidence 3688999999999999999999999999998765
No 150
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=97.04 E-value=0.00018 Score=64.78 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=29.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
+..|+|.|++|+|||++++.+|..++.+|+..+
T Consensus 44 ~~~vll~G~~GtGKT~la~~la~~~~~~~~~v~ 76 (268)
T 2r62_A 44 PKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMG 76 (268)
T ss_dssp CSCCCCBCSSCSSHHHHHHHHHHHHTCCCCCCC
T ss_pred CceEEEECCCCCcHHHHHHHHHHHhCCCEEEec
Confidence 567999999999999999999999999888764
No 151
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.00036 Score=70.00 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=31.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.++.|+|.|+||+|||++|+++|..+|++|+..+
T Consensus 214 ~prGvLL~GPPGtGKTllAkAiA~e~~~~~~~v~ 247 (437)
T 4b4t_L 214 PPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSP 247 (437)
T ss_dssp CCCEEEEESCTTSSHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHhCCCEEEEe
Confidence 3689999999999999999999999999998765
No 152
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=97.03 E-value=0.00041 Score=64.33 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=28.7
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
++.+.|+|++|+||||+++.||..++..++..+
T Consensus 44 ~~GvlL~Gp~GtGKTtLakala~~~~~~~i~i~ 76 (274)
T 2x8a_A 44 PAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 76 (274)
T ss_dssp CSEEEEESSTTSCHHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHcCCCEEEEE
Confidence 456999999999999999999999998776543
No 153
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=97.01 E-value=0.00059 Score=58.38 Aligned_cols=35 Identities=14% Similarity=0.022 Sum_probs=28.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lI 221 (345)
.+..+.|+|++||||||+++.+. .|...++.|.+.
T Consensus 8 ~gei~~l~G~nGsGKSTl~~~~~--~~~~~~~~d~~~ 42 (171)
T 4gp7_A 8 ELSLVVLIGSSGSGKSTFAKKHF--KPTEVISSDFCR 42 (171)
T ss_dssp SSEEEEEECCTTSCHHHHHHHHS--CGGGEEEHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHc--cCCeEEccHHHH
Confidence 56789999999999999999864 466777777654
No 154
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=97.00 E-value=0.00043 Score=64.92 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=30.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
..+|+|.|++|+|||++|+.+|..++.+|+..+
T Consensus 51 ~~~vLl~GppGtGKT~la~aia~~~~~~~~~v~ 83 (322)
T 3eie_A 51 TSGILLYGPPGTGKSYLAKAVATEANSTFFSVS 83 (322)
T ss_dssp CCEEEEECSSSSCHHHHHHHHHHHHTCEEEEEE
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHHCCCEEEEc
Confidence 468999999999999999999999999998765
No 155
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=96.98 E-value=0.00047 Score=61.65 Aligned_cols=29 Identities=7% Similarity=0.011 Sum_probs=25.7
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh-CCce
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL-GYTP 214 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L-g~~f 214 (345)
++.|+|.|.+||||||+++.|++.| ++.+
T Consensus 2 ~~~i~~~G~~g~GKtt~~~~l~~~l~~~~~ 31 (241)
T 2ocp_A 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHcCCCee
Confidence 5779999999999999999999999 5543
No 156
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=96.94 E-value=0.00094 Score=67.51 Aligned_cols=33 Identities=18% Similarity=0.108 Sum_probs=30.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
++.|+|+|++|+|||++++.+|..++.+|+..+
T Consensus 49 p~gvLL~GppGtGKT~Laraia~~~~~~f~~is 81 (476)
T 2ce7_A 49 PKGILLVGPPGTGKTLLARAVAGEANVPFFHIS 81 (476)
T ss_dssp CSEEEEECCTTSSHHHHHHHHHHHHTCCEEEEE
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHcCCCeeeCC
Confidence 567999999999999999999999999998764
No 157
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=96.90 E-value=0.00072 Score=59.04 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=29.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh---CCc--eeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL---GYT--PLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L---g~~--fID~D~lI 221 (345)
.+..|.|+|++||||||+++.|+..+ |.. +++.|.+.
T Consensus 21 ~~~~i~i~G~~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~ 62 (201)
T 1rz3_A 21 GRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHI 62 (201)
T ss_dssp SSEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhcCCeEEEeccCccc
Confidence 45679999999999999999999976 544 44667754
No 158
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=96.89 E-value=0.0007 Score=61.82 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=29.6
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.|+|+|++|+||||+++.+|..++..++..+
T Consensus 73 ~~gvll~Gp~GtGKTtl~~~i~~~~~~~~i~~~ 105 (278)
T 1iy2_A 73 PKGVLLVGPPGVGKTHLARAVAGEARVPFITAS 105 (278)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEECCCcChHHHHHHHHHHHcCCCEEEec
Confidence 456999999999999999999999998888765
No 159
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=96.89 E-value=0.00056 Score=65.53 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=30.2
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
..+|+|.|++|+|||++|+.+|..++.+|+..+
T Consensus 84 ~~~iLL~GppGtGKT~la~ala~~~~~~~~~v~ 116 (355)
T 2qp9_X 84 TSGILLYGPPGTGKSYLAKAVATEANSTFFSVS 116 (355)
T ss_dssp CCCEEEECSTTSCHHHHHHHHHHHHTCEEEEEE
T ss_pred CceEEEECCCCCcHHHHHHHHHHHhCCCEEEee
Confidence 467999999999999999999999999998765
No 160
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=96.89 E-value=0.00066 Score=64.88 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=30.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
...+|+|.|++|+|||++++.+|..++.+|+..+
T Consensus 116 ~~~~vLl~GppGtGKT~la~aia~~~~~~~~~i~ 149 (357)
T 3d8b_A 116 PPKGILLFGPPGTGKTLIGKCIASQSGATFFSIS 149 (357)
T ss_dssp CCSEEEEESSTTSSHHHHHHHHHHHTTCEEEEEE
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHcCCeEEEEe
Confidence 4678999999999999999999999999987654
No 161
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=96.88 E-value=0.00023 Score=61.53 Aligned_cols=25 Identities=12% Similarity=0.064 Sum_probs=22.9
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
+.|+|+|++||||||+++.|++.|+
T Consensus 1 ~~I~i~G~~GsGKsTl~~~L~~~l~ 25 (214)
T 1gtv_A 1 MLIAIEGVDGAGKRTLVEKLSGAFR 25 (214)
T ss_dssp CEEEEEEEEEEEHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 3589999999999999999999985
No 162
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=96.87 E-value=0.0007 Score=65.14 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=30.5
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
+.+|+|.|++|+|||++|+.+|..++.+|+..+
T Consensus 148 ~~~vLL~GppGtGKT~la~aia~~~~~~~~~v~ 180 (389)
T 3vfd_A 148 ARGLLLFGPPGNGKTMLAKAVAAESNATFFNIS 180 (389)
T ss_dssp CSEEEEESSTTSCHHHHHHHHHHHTTCEEEEEC
T ss_pred CceEEEECCCCCCHHHHHHHHHHhhcCcEEEee
Confidence 579999999999999999999999999998654
No 163
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=96.85 E-value=0.00061 Score=59.46 Aligned_cols=28 Identities=14% Similarity=0.253 Sum_probs=25.0
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCce
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTP 214 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~f 214 (345)
+++.|+|++||||||+.+.|+..++..+
T Consensus 1 ~~i~l~G~nGsGKTTLl~~l~g~l~i~~ 28 (178)
T 1ye8_A 1 MKIIITGEPGVGKTTLVKKIVERLGKRA 28 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHGGGE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCcC
Confidence 4689999999999999999999998554
No 164
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.00056 Score=69.39 Aligned_cols=34 Identities=18% Similarity=0.047 Sum_probs=31.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.++.|+|.|+||+|||++|+++|..++++|+..+
T Consensus 242 pprGILLyGPPGTGKTlLAkAiA~e~~~~fi~vs 275 (467)
T 4b4t_H 242 PPKGILLYGPPGTGKTLCARAVANRTDATFIRVI 275 (467)
T ss_dssp CCSEEEECSCTTSSHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCceEeeCCCCCcHHHHHHHHHhccCCCeEEEE
Confidence 4689999999999999999999999999998765
No 165
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.0007 Score=68.19 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=30.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
++.|+|.|+||+|||.+|+++|..++++|+..+
T Consensus 216 prGvLLyGPPGTGKTlLAkAiA~e~~~~fi~v~ 248 (437)
T 4b4t_I 216 PKGVILYGAPGTGKTLLAKAVANQTSATFLRIV 248 (437)
T ss_dssp CSEEEEESSTTTTHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCceECCCCchHHHHHHHHHHHhCCCEEEEE
Confidence 688999999999999999999999999998765
No 166
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=96.81 E-value=0.00078 Score=63.69 Aligned_cols=32 Identities=22% Similarity=0.128 Sum_probs=28.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh-CCceeeC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL-GYTPLST 217 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L-g~~fID~ 217 (345)
.+.|+|.|++|+|||++++.+|..+ +.+|+..
T Consensus 45 ~~~iLL~GppGtGKT~la~ala~~~~~~~~~~i 77 (322)
T 1xwi_A 45 WRGILLFGPPGTGKSYLAKAVATEANNSTFFSI 77 (322)
T ss_dssp CSEEEEESSSSSCHHHHHHHHHHHTTSCEEEEE
T ss_pred CceEEEECCCCccHHHHHHHHHHHcCCCcEEEE
Confidence 4789999999999999999999999 7777643
No 167
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=96.80 E-value=0.00075 Score=61.75 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=32.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lI 221 (345)
.++.|+|+|++|+||||++..|+++.+ .+|..|...
T Consensus 33 ~g~~ilI~GpsGsGKStLA~~La~~g~-~iIsdDs~~ 68 (205)
T 2qmh_A 33 YGLGVLITGDSGVGKSETALELVQRGH-RLIADDRVD 68 (205)
T ss_dssp TTEEEEEECCCTTTTHHHHHHHHTTTC-EEEESSEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhCC-eEEecchhh
Confidence 578899999999999999999999977 999998753
No 168
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=96.78 E-value=0.00084 Score=66.34 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=31.8
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhC--CceeeCcH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLG--YTPLSTKE 219 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg--~~fID~D~ 219 (345)
..+.+|+|.|++|+|||++|+.+|+.+| ++|+..+.
T Consensus 61 ~~~~~iLl~GppGtGKT~la~ala~~l~~~~~~~~~~~ 98 (456)
T 2c9o_A 61 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98 (456)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHHHHCTTSCEEEEEG
T ss_pred CCCCeEEEECCCcCCHHHHHHHHHHHhCCCceEEEEeH
Confidence 3457899999999999999999999999 88887663
No 169
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=96.78 E-value=0.0013 Score=56.50 Aligned_cols=38 Identities=16% Similarity=0.221 Sum_probs=30.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh---CCce--eeCcHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL---GYTP--LSTKELLETF 224 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L---g~~f--ID~D~lIE~~ 224 (345)
.+|+|.|++|+|||++++.++..+ +.++ ++..+++.+.
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~~~~~~~~~~~~~~~~~~~~ 97 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYVPELFREL 97 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEhHHHHHHH
Confidence 789999999999999999999987 4444 6666665543
No 170
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=96.74 E-value=0.00044 Score=57.50 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=28.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.+|+|.|.+|+|||++|+.++...+ +|+..|
T Consensus 26 ~~~~vll~G~~GtGKt~lA~~i~~~~~-~~~~~~ 58 (143)
T 3co5_A 26 RTSPVFLTGEAGSPFETVARYFHKNGT-PWVSPA 58 (143)
T ss_dssp CSSCEEEEEETTCCHHHHHGGGCCTTS-CEECCS
T ss_pred CCCcEEEECCCCccHHHHHHHHHHhCC-CeEEec
Confidence 467899999999999999999999888 666554
No 171
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=96.72 E-value=0.00083 Score=58.89 Aligned_cols=26 Identities=15% Similarity=0.075 Sum_probs=22.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.++.++|+|++||||||+.+.|+..+
T Consensus 3 ~g~~i~lvGpsGaGKSTLl~~L~~~~ 28 (198)
T 1lvg_A 3 GPRPVVLSGPSGAGKSTLLKKLFQEH 28 (198)
T ss_dssp --CCEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhC
Confidence 36789999999999999999999865
No 172
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=96.71 E-value=0.00071 Score=61.80 Aligned_cols=27 Identities=22% Similarity=0.188 Sum_probs=24.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+.+|+|.|++|+|||++++.+|+.++
T Consensus 66 ~~~~vll~G~~GtGKT~la~~la~~l~ 92 (309)
T 3syl_A 66 PTLHMSFTGNPGTGKTTVALKMAGLLH 92 (309)
T ss_dssp CCCEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHH
Confidence 456899999999999999999999983
No 173
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=96.70 E-value=0.00092 Score=59.26 Aligned_cols=26 Identities=23% Similarity=0.083 Sum_probs=17.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHH-Hhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELA-VGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA-~~L 210 (345)
.+..|.|+|++||||||+++.|+ ..+
T Consensus 26 ~G~ii~l~Gp~GsGKSTl~~~L~~~~~ 52 (231)
T 3lnc_A 26 VGVILVLSSPSGCGKTTVANKLLEKQK 52 (231)
T ss_dssp CCCEEEEECSCC----CHHHHHHC---
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 57889999999999999999999 665
No 174
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=96.69 E-value=0.0015 Score=57.13 Aligned_cols=28 Identities=21% Similarity=0.160 Sum_probs=24.6
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
-.+..+.|+|++||||||+.+.|+..+.
T Consensus 18 ~~Gei~~l~GpnGsGKSTLl~~l~gl~~ 45 (207)
T 1znw_A 18 AVGRVVVLSGPSAVGKSTVVRCLRERIP 45 (207)
T ss_dssp -CCCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCC
Confidence 3578899999999999999999998874
No 175
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=96.67 E-value=0.0036 Score=62.34 Aligned_cols=33 Identities=15% Similarity=0.001 Sum_probs=30.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE 219 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~ 219 (345)
.+++|.|++|+||||+++.+|+.++.+|+..+.
T Consensus 51 ~~vLL~GppGtGKTtlAr~ia~~~~~~f~~l~a 83 (447)
T 3pvs_A 51 HSMILWGPPGTGKTTLAEVIARYANADVERISA 83 (447)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHTTCEEEEEET
T ss_pred cEEEEECCCCCcHHHHHHHHHHHhCCCeEEEEe
Confidence 689999999999999999999999999987653
No 176
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=96.66 E-value=0.0012 Score=66.37 Aligned_cols=33 Identities=24% Similarity=0.203 Sum_probs=30.5
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
...++|.|++|+||||+++.+|+.+|++++..+
T Consensus 77 ~~~lLL~GppGtGKTtla~~la~~l~~~~i~in 109 (516)
T 1sxj_A 77 FRAAMLYGPPGIGKTTAAHLVAQELGYDILEQN 109 (516)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHTTCEEEEEC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcCCCEEEEe
Confidence 368999999999999999999999999998765
No 177
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=96.63 E-value=0.0014 Score=62.02 Aligned_cols=29 Identities=17% Similarity=0.106 Sum_probs=26.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCcee
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPL 215 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fI 215 (345)
.+++|+|++|+||||+++.+|..++.++.
T Consensus 52 ~~~ll~Gp~G~GKTTLa~~ia~~l~~~~~ 80 (334)
T 1in4_A 52 DHVLLAGPPGLGKTTLAHIIASELQTNIH 80 (334)
T ss_dssp CCEEEESSTTSSHHHHHHHHHHHHTCCEE
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhCCCEE
Confidence 67999999999999999999999987653
No 178
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=96.56 E-value=0.0033 Score=67.50 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=30.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.|+|.|+||+|||.+|+++|..++.+|+..+
T Consensus 511 ~~gvLl~GPPGtGKT~lAkaiA~e~~~~f~~v~ 543 (806)
T 3cf2_A 511 SKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543 (806)
T ss_dssp CSCCEEESSTTSSHHHHHHHHHHTTTCEEEECC
T ss_pred CceEEEecCCCCCchHHHHHHHHHhCCceEEec
Confidence 467999999999999999999999999999876
No 179
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=96.56 E-value=0.0013 Score=60.39 Aligned_cols=33 Identities=21% Similarity=0.136 Sum_probs=29.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLST 217 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~ 217 (345)
...+++|.|++|+|||++++.+|+.++.+++..
T Consensus 37 ~~~~vll~G~~GtGKT~la~~i~~~~~~~~~~~ 69 (324)
T 1hqc_A 37 PLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVT 69 (324)
T ss_dssp CCCCCEEECCTTCCCHHHHHHHHHHHTCCEEEE
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHhCCCEEEE
Confidence 357899999999999999999999999988643
No 180
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=96.55 E-value=0.0016 Score=60.56 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=29.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh---CCcee--eCcHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL---GYTPL--STKELL 221 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L---g~~fI--D~D~lI 221 (345)
+.+++|.|++|+||||+++.++..+ +.+++ +.+++.
T Consensus 37 ~~~lll~G~~GtGKT~la~~i~~~~~~~~~~~~~i~~~~~~ 77 (324)
T 1l8q_A 37 YNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFA 77 (324)
T ss_dssp CSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHH
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEHHHHH
Confidence 4689999999999999999999988 66655 444443
No 181
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.51 E-value=0.0039 Score=53.98 Aligned_cols=84 Identities=14% Similarity=0.216 Sum_probs=67.3
Q ss_pred CcceEEeecccceeeeeeecCcccccccceeEecC-CceEEEEeeccCCccceeeeccccccccCCCceeeecccceeeh
Q 019172 78 TSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDAD-GTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVIN 156 (345)
Q Consensus 78 ~~~y~~~~~~~Ele~rl~l~~~~~~~sr~i~I~~~-d~~L~~~vls~~~~~tlIe~k~l~~~i~p~Etiw~~Dd~~~~~~ 156 (345)
++.|.|.|+..+|.+.|.+++ ..++.|++. ..+|.|+........-.++ -.||..|.|. +.|.+-...+.+.
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~-----~~~v~V~~~~~~~l~~~~~~~~~~~y~~~-l~L~~~Idpe-S~~~v~~~kIei~ 76 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPD-----AKDISVKCEPQGLFSFSALGAQGERFEFS-LELYGKIMTE-YRKNVGLRNIIFS 76 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSS-----EEEEEECCCTTEEEEEEEETTTTEEEEEE-EEBSSCEEEE-EEEEEESSSEEEE
T ss_pred CCcEEEEeCCCEEEEEEEeCC-----CCceEEEEecCCEEEEEEEcCCCceEEEE-eEhhhccccc-ceEEecCCEEEEE
Confidence 468999999999999999998 368999999 7899998874332333455 4799999999 9999988889999
Q ss_pred ccccCCCCCcchh
Q 019172 157 LKKQDPELKWPDI 169 (345)
Q Consensus 157 ~k~~~~~~~~~~~ 169 (345)
++|... ..||.+
T Consensus 77 L~K~e~-~~W~rL 88 (150)
T 2kmw_A 77 IQKEER-SWWTRL 88 (150)
T ss_dssp EEECCS-SCCSCS
T ss_pred EEECCC-CcCccc
Confidence 988764 466665
No 182
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=96.50 E-value=0.0012 Score=61.39 Aligned_cols=31 Identities=19% Similarity=0.098 Sum_probs=28.7
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceee
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLS 216 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID 216 (345)
+.+++|.|++|+|||++++.+|..++.+++.
T Consensus 46 ~~~vll~G~pGtGKT~la~~la~~~~~~~~~ 76 (331)
T 2r44_A 46 GGHILLEGVPGLAKTLSVNTLAKTMDLDFHR 76 (331)
T ss_dssp TCCEEEESCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHhCCCeEE
Confidence 6799999999999999999999999988764
No 183
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=96.49 E-value=0.0025 Score=54.02 Aligned_cols=27 Identities=22% Similarity=0.228 Sum_probs=24.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
+..++|.|++|+||||+++.+++.++.
T Consensus 45 ~~~~ll~G~~G~GKT~l~~~~~~~~~~ 71 (250)
T 1njg_A 45 HHAYLFSGTRGVGKTSIARLLAKGLNC 71 (250)
T ss_dssp CSEEEEECSTTSCHHHHHHHHHHHHHC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhcC
Confidence 347999999999999999999999865
No 184
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=96.49 E-value=0.0019 Score=60.43 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=28.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCC--ceeeC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGY--TPLST 217 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~--~fID~ 217 (345)
.+.+++|.|++|+|||++++.+|+.++. +|+..
T Consensus 69 ~~~~vLl~GppGtGKT~la~~la~~l~~~~~~~~~ 103 (368)
T 3uk6_A 69 AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAI 103 (368)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHHHHCSSCCEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhcccCCcccc
Confidence 3578999999999999999999999985 55443
No 185
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=96.48 E-value=0.0016 Score=57.92 Aligned_cols=26 Identities=12% Similarity=0.057 Sum_probs=24.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.|+..+
T Consensus 22 ~G~~~~lvGpsGsGKSTLl~~L~g~~ 47 (218)
T 1z6g_A 22 NIYPLVICGPSGVGKGTLIKKLLNEF 47 (218)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhC
Confidence 57889999999999999999999876
No 186
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=96.47 E-value=0.0018 Score=64.02 Aligned_cols=33 Identities=21% Similarity=0.118 Sum_probs=28.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh-CCceeeC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL-GYTPLST 217 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L-g~~fID~ 217 (345)
....|+|.|++|+|||++|+.+|..+ +.+|+..
T Consensus 166 ~~~~vLL~GppGtGKT~lA~aia~~~~~~~~~~v 199 (444)
T 2zan_A 166 PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSI 199 (444)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHCCSSEEEEE
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHcCCCCEEEE
Confidence 35789999999999999999999999 8777644
No 187
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=96.45 E-value=0.0019 Score=58.85 Aligned_cols=25 Identities=24% Similarity=0.230 Sum_probs=23.1
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+++|+|++|+|||++|+.+|+.+.
T Consensus 48 ~~~ll~G~~GtGKt~la~~la~~~~ 72 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELAKTLAATLF 72 (311)
T ss_dssp EEEEEESCSSSSHHHHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHHHHc
Confidence 4799999999999999999999983
No 188
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=96.43 E-value=0.0019 Score=54.39 Aligned_cols=25 Identities=20% Similarity=0.228 Sum_probs=22.6
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+++|.|++|+|||++++.+++.+
T Consensus 38 ~~~~ll~G~~G~GKT~l~~~l~~~~ 62 (226)
T 2chg_A 38 IPHLLFSGPPGTGKTATAIALARDL 62 (226)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 3469999999999999999999986
No 189
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=96.43 E-value=0.0014 Score=60.72 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=29.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh---------CCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL---------GYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L---------g~~fID~D 218 (345)
.+.+++|+|++|+||||+++.+++.+ +++++..+
T Consensus 43 ~~~~vll~G~~G~GKT~l~~~~~~~~~~~~~~~~~~~~~~~i~ 85 (387)
T 2v1u_A 43 KPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYVN 85 (387)
T ss_dssp CCCCEEECBCTTSSHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence 46789999999999999999999998 77776554
No 190
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=96.41 E-value=0.0022 Score=63.87 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=30.5
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh----------CCceeeCcH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL----------GYTPLSTKE 219 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L----------g~~fID~D~ 219 (345)
....+++|+|++|+|||++++.||+.+ +.+++..|-
T Consensus 199 ~~~~~~LL~G~pG~GKT~la~~la~~l~~~~~p~~l~~~~~~~l~~ 244 (468)
T 3pxg_A 199 RTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDM 244 (468)
T ss_dssp SSSCEEEEESCTTTTTHHHHHHHHHHHHSSCSCTTTSSCCEECC--
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHHHHHhCCCChhhcCCeEEEeeC
Confidence 356789999999999999999999997 788887774
No 191
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=96.40 E-value=0.0021 Score=65.35 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=30.5
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLST 217 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~ 217 (345)
..+..++|+|++|+||||+++.+|..++.+++..
T Consensus 106 ~~g~~vll~Gp~GtGKTtlar~ia~~l~~~~~~i 139 (543)
T 3m6a_A 106 LKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRI 139 (543)
T ss_dssp CCSCEEEEESSSSSSHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhcCCCeEEE
Confidence 3678899999999999999999999999887654
No 192
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=96.39 E-value=0.0021 Score=59.40 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=29.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh------CCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL------GYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L------g~~fID~D 218 (345)
.+..++|+|++|+||||+++.++..+ ++.++..+
T Consensus 44 ~~~~vli~G~~G~GKTtl~~~l~~~~~~~~~~~~~~~~i~ 83 (386)
T 2qby_A 44 KPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKHVYIN 83 (386)
T ss_dssp CCCCEEEEECTTSSHHHHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 46789999999999999999999988 77777665
No 193
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=96.39 E-value=0.0023 Score=59.82 Aligned_cols=34 Identities=9% Similarity=-0.058 Sum_probs=30.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh-----------CCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL-----------GYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L-----------g~~fID~D 218 (345)
.+.+++|.|++|+||||+++.+++.+ +++++..+
T Consensus 44 ~~~~vll~G~~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~i~ 88 (384)
T 2qby_B 44 VKFSNLFLGLTGTGKTFVSKYIFNEIEEVKKEDEEYKDVKQAYVN 88 (384)
T ss_dssp CCCEEEEEECTTSSHHHHHHHHHHHHHHHHHHSSSSTTCEEEEEE
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHHHHhhhhcCCCCceEEEEE
Confidence 35689999999999999999999988 88888766
No 194
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=96.39 E-value=0.012 Score=58.19 Aligned_cols=36 Identities=8% Similarity=0.174 Sum_probs=29.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh-----CCcee--eCcHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL-----GYTPL--STKELL 221 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L-----g~~fI--D~D~lI 221 (345)
..+++|.|++|+||||+++.+|..+ +.+++ +..++.
T Consensus 130 ~~~lll~Gp~G~GKTtLa~aia~~l~~~~~~~~v~~v~~~~~~ 172 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFL 172 (440)
T ss_dssp SCCEEEECSSSSSHHHHHHHHHHHHHHHCCSSCEEEEEHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEeeHHHHH
Confidence 5689999999999999999999988 65544 555543
No 195
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=96.33 E-value=0.0019 Score=69.44 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=31.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE 219 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~ 219 (345)
++.|+|.|+||+|||++|+.+|..+|.+|+..+-
T Consensus 238 p~GILL~GPPGTGKT~LAraiA~elg~~~~~v~~ 271 (806)
T 3cf2_A 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLING 271 (806)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHTTTTCEEEEEEH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhCCeEEEEEh
Confidence 5789999999999999999999999999998763
No 196
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=96.31 E-value=0.0025 Score=57.52 Aligned_cols=27 Identities=15% Similarity=0.058 Sum_probs=24.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..++|+|++||||||+.+.|+..+.
T Consensus 15 ~G~ii~l~GpsGsGKSTLlk~L~g~~~ 41 (219)
T 1s96_A 15 QGTLYIVSAPSGAGKSSLIQALLKTQP 41 (219)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCCCCHHHHHHHHhccCC
Confidence 578899999999999999999998764
No 197
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=96.29 E-value=0.0024 Score=60.19 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=30.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCC-------cee-eCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGY-------TPL-STKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~-------~fI-D~D~lI 221 (345)
++..|.|+|++||||||+++.|+..|+- ..+ ..|.++
T Consensus 30 ~~~ii~I~G~sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f~ 74 (290)
T 1odf_A 30 CPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFY 74 (290)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGB
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhhhcCCCCceEEEecccccc
Confidence 4567889999999999999999999862 345 888874
No 198
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=96.25 E-value=0.0022 Score=58.64 Aligned_cols=30 Identities=17% Similarity=-0.129 Sum_probs=26.0
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
..+++-|+|.|++||||||+++.|++.|+.
T Consensus 18 ~~~~~~i~~~G~~g~GKst~~~~l~~~l~~ 47 (223)
T 3ld9_A 18 GPGSMFITFEGIDGSGKTTQSHLLAEYLSE 47 (223)
T ss_dssp -CCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 346788999999999999999999998765
No 199
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=96.24 E-value=0.0028 Score=54.50 Aligned_cols=27 Identities=19% Similarity=0.291 Sum_probs=24.8
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
-.+..+.|+|++||||||+.+.|+..+
T Consensus 31 ~~Ge~v~L~G~nGaGKTTLlr~l~g~l 57 (158)
T 1htw_A 31 EKAIMVYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 457789999999999999999999988
No 200
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=96.21 E-value=0.0029 Score=63.84 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=31.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.+|+|.|++|+|||++|+.+|..++.+|+..+
T Consensus 237 ~~~~vLL~GppGtGKT~lAraia~~~~~~fv~vn 270 (489)
T 3hu3_A 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLIN 270 (489)
T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHCSSEEEEEE
T ss_pred CCCcEEEECcCCCCHHHHHHHHHHHhCCCEEEEE
Confidence 4578999999999999999999999999998765
No 201
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=96.21 E-value=0.0032 Score=55.95 Aligned_cols=24 Identities=17% Similarity=0.162 Sum_probs=21.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+.|+|+||+|+||+||.+.|.+.+
T Consensus 2 RpIVi~GPSG~GK~Tl~~~L~~~~ 25 (186)
T 1ex7_A 2 RPIVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHhC
Confidence 459999999999999999998765
No 202
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=96.20 E-value=0.0042 Score=57.44 Aligned_cols=32 Identities=13% Similarity=0.016 Sum_probs=27.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
..+++.|++|+|||++++.+|+.++.+++..+
T Consensus 49 ~~~L~~G~~G~GKT~la~~la~~l~~~~~~i~ 80 (324)
T 3u61_B 49 HIILHSPSPGTGKTTVAKALCHDVNADMMFVN 80 (324)
T ss_dssp SEEEECSSTTSSHHHHHHHHHHHTTEEEEEEE
T ss_pred eEEEeeCcCCCCHHHHHHHHHHHhCCCEEEEc
Confidence 44566677999999999999999999988766
No 203
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=96.18 E-value=0.0033 Score=63.90 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=29.6
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
++.|+|+|++|+||||+++.+|..++.+|+..+
T Consensus 64 p~GvLL~GppGtGKTtLaraIa~~~~~~~i~i~ 96 (499)
T 2dhr_A 64 PKGVLLVGPPGVGKTHLARAVAGEARVPFITAS 96 (499)
T ss_dssp CSEEEEECSSSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEECCCCCCHHHHHHHHHHHhCCCEEEEe
Confidence 456999999999999999999999998887665
No 204
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=96.17 E-value=0.0034 Score=56.48 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=27.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC---CceeeC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG---YTPLST 217 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg---~~fID~ 217 (345)
.+.+|+|.|.+|+|||++++.+++.++ .+|+..
T Consensus 28 ~~~~vll~G~~GtGKt~la~~i~~~~~~~~~~~~~v 63 (265)
T 2bjv_A 28 LDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISL 63 (265)
T ss_dssp SCSCEEEECCTTSCHHHHHHHHHHTSTTTTSCEEEE
T ss_pred CCCCEEEECCCCCcHHHHHHHHHHhcCccCCCeEEE
Confidence 467899999999999999999999875 456544
No 205
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=96.14 E-value=0.0032 Score=55.19 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=28.0
Q ss_pred cCCceEEEEcCCCCChHHHHHHHH--Hh----hCCceeeCcHH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELA--VG----LGYTPLSTKEL 220 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA--~~----Lg~~fID~D~l 220 (345)
-.+..+.|+|++||||||+.+.++ -. -+.-+++.+..
T Consensus 28 ~~G~~~~l~GpnGsGKSTLl~~i~~~~~~~~~~~~~~~~~~~~ 70 (251)
T 2ehv_A 28 PEGTTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEER 70 (251)
T ss_dssp ETTCEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSC
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 357889999999999999999888 22 23456666543
No 206
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=96.13 E-value=0.0027 Score=67.66 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=31.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.+|+|+|++|+||||+++.||..++.+++..+
T Consensus 237 ~~~~vLL~Gp~GtGKTtLarala~~l~~~~i~v~ 270 (806)
T 1ypw_A 237 PPRGILLYGPPGTGKTLIARAVANETGAFFFLIN 270 (806)
T ss_dssp CCCEEEECSCTTSSHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCeEEEECcCCCCHHHHHHHHHHHcCCcEEEEE
Confidence 4678999999999999999999999999988776
No 207
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=96.10 E-value=0.0039 Score=56.58 Aligned_cols=28 Identities=18% Similarity=0.082 Sum_probs=26.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
+++-|+|.|++||||||+++.|++.|+.
T Consensus 4 ~g~~i~~eG~~g~GKst~~~~l~~~l~~ 31 (216)
T 3tmk_A 4 RGKLILIEGLDRTGKTTQCNILYKKLQP 31 (216)
T ss_dssp CCCEEEEEECSSSSHHHHHHHHHHHHCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhcc
Confidence 4788999999999999999999999986
No 208
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=96.09 E-value=0.0041 Score=57.92 Aligned_cols=31 Identities=10% Similarity=-0.121 Sum_probs=27.1
Q ss_pred eEEEEcCCCCChHHHHHHHHHhh----CCceeeCc
Q 019172 188 SIFLVGDSTEVNEKVALELAVGL----GYTPLSTK 218 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~L----g~~fID~D 218 (345)
+++|+|++|+||||+++.++..+ ++.++..+
T Consensus 46 ~~li~G~~G~GKTtl~~~l~~~~~~~~~~~~~~i~ 80 (389)
T 1fnn_A 46 RATLLGRPGTGKTVTLRKLWELYKDKTTARFVYIN 80 (389)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEE
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhhhcCeeEEEEe
Confidence 89999999999999999999998 56666554
No 209
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=96.08 E-value=0.0038 Score=65.31 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=30.9
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh----------CCceeeCcH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL----------GYTPLSTKE 219 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L----------g~~fID~D~ 219 (345)
..+.+++|+|++|+|||++++.||+.+ +..++..|-
T Consensus 199 ~~~~~vLL~G~pGtGKT~la~~la~~l~~~~~p~~l~~~~~~~~~~ 244 (758)
T 3pxi_A 199 RTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDM 244 (758)
T ss_dssp SSSCEEEEESCTTTTTHHHHHHHHHHHHSSCSCTTTSSCCEECC--
T ss_pred CCCCCeEEECCCCCCHHHHHHHHHHHHhcCCCChhhcCCeEEEecc
Confidence 356789999999999999999999998 888888776
No 210
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=96.03 E-value=0.0049 Score=60.48 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=30.4
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhCCceeeC
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLST 217 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~ 217 (345)
...+..|.|+|++|+||||+++.|+..++..++..
T Consensus 166 i~~~~~i~l~G~~GsGKSTl~~~l~~~~~g~~~~~ 200 (377)
T 1svm_A 166 IPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNV 200 (377)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECC
T ss_pred cCCCCEEEEECCCCCCHHHHHHHHHhhcCCcEEEE
Confidence 34577899999999999999999999998877763
No 211
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=95.98 E-value=0.0047 Score=59.39 Aligned_cols=26 Identities=4% Similarity=0.143 Sum_probs=24.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+.+|+|.|+||+|||++++.+++.|
T Consensus 44 ~~~~lli~GpPGTGKT~~v~~v~~~L 69 (318)
T 3te6_A 44 QNKLFYITNADDSTKFQLVNDVMDEL 69 (318)
T ss_dssp CCCEEEEECCCSHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 67899999999999999999999999
No 212
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=95.96 E-value=0.004 Score=53.85 Aligned_cols=27 Identities=19% Similarity=0.092 Sum_probs=23.6
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+..+.|+|++||||||+++.|+..+
T Consensus 23 ~~G~~~~l~G~nGsGKSTll~~l~g~~ 49 (231)
T 4a74_A 23 ETQAITEVFGEFGSGKTQLAHTLAVMV 49 (231)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 357789999999999999999999743
No 213
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=95.96 E-value=0.0041 Score=59.09 Aligned_cols=37 Identities=19% Similarity=0.060 Sum_probs=30.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-------CceeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-------YTPLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-------~~fID~D~lI 221 (345)
.+..|.|+|++||||||+++.|+..+. ..++..|.++
T Consensus 89 ~g~ivgI~G~sGsGKSTL~~~L~gll~~~~G~~~v~~v~qd~~~ 132 (312)
T 3aez_A 89 VPFIIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGFL 132 (312)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHHTSTTCCCEEEEEGGGGB
T ss_pred CCEEEEEECCCCchHHHHHHHHHhhccccCCCCeEEEEecCccC
Confidence 466789999999999999999999873 4577777653
No 214
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=95.93 E-value=0.0053 Score=52.80 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=28.8
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhh-----CCceeeCcH
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGL-----GYTPLSTKE 219 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~L-----g~~fID~D~ 219 (345)
...+..+.|+|++|+||||+++.++..+ ..-|++.+.
T Consensus 20 i~~G~~~~i~G~~GsGKTtl~~~l~~~~~~~~~~v~~~~~~~ 61 (235)
T 2w0m_A 20 IPQGFFIALTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTTEE 61 (235)
T ss_dssp EETTCEEEEECSTTSSHHHHHHHHHHHHHHHTCCEEEEESSS
T ss_pred CcCCCEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 3457889999999999999999999543 345666654
No 215
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=95.91 E-value=0.0046 Score=54.62 Aligned_cols=25 Identities=16% Similarity=0.189 Sum_probs=22.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+..|.|+|++||||||+.+.|+..+
T Consensus 1 G~~i~i~G~nG~GKTTll~~l~g~~ 25 (189)
T 2i3b_A 1 ARHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCCEEEESCCSSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCChHHHHHHHHHhhc
Confidence 3568999999999999999999987
No 216
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=95.84 E-value=0.0068 Score=54.52 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=32.2
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELL 221 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lI 221 (345)
..++.|+|.|++|+||||++..|.++ |+.++.=|...
T Consensus 14 v~G~gvli~G~SGaGKStlal~L~~r-G~~lvaDD~v~ 50 (181)
T 3tqf_A 14 IDKMGVLITGEANIGKSELSLALIDR-GHQLVCDDVID 50 (181)
T ss_dssp ETTEEEEEEESSSSSHHHHHHHHHHT-TCEEEESSEEE
T ss_pred ECCEEEEEEcCCCCCHHHHHHHHHHc-CCeEecCCEEE
Confidence 36788999999999999999999985 99988877654
No 217
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=95.84 E-value=0.012 Score=55.42 Aligned_cols=44 Identities=11% Similarity=0.024 Sum_probs=34.0
Q ss_pred hhHHHHHHhhhhhcCCceEEEEcCCCCChHHHHHHHHHhhCCce
Q 019172 171 ESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTP 214 (345)
Q Consensus 171 ~~~~~l~a~~~~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~f 214 (345)
+.|+.+...+.....+..++|.|++|+|||++++.+|+.+....
T Consensus 9 ~~~~~l~~~i~~~~~~~a~L~~G~~G~GKt~~a~~la~~l~~~~ 52 (334)
T 1a5t_A 9 PDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQ 52 (334)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHcCCcceeEEEECCCCchHHHHHHHHHHHHhCCC
Confidence 55666666444443455699999999999999999999998764
No 218
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=95.83 E-value=0.0043 Score=56.33 Aligned_cols=27 Identities=11% Similarity=0.041 Sum_probs=23.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.|+-.+.
T Consensus 30 ~Ge~~~iiG~nGsGKSTLl~~l~Gl~~ 56 (235)
T 3tif_A 30 EGEFVSIMGPSGSGKSTMLNIIGCLDK 56 (235)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCCC
Confidence 477899999999999999999986653
No 219
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=95.77 E-value=0.0061 Score=57.46 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=32.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhC----Cc--eeeCcHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLG----YT--PLSTKELLETFA 225 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg----~~--fID~D~lIE~~~ 225 (345)
+.+++|.|++|+|||++++.+|..+. ++ |+.+.+++.+..
T Consensus 152 ~~~lll~G~~GtGKT~La~aia~~~~~~~g~~v~~~~~~~l~~~l~ 197 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVK 197 (308)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHhcCCcEEEEEHHHHHHHHH
Confidence 58999999999999999999998654 44 467777766543
No 220
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=95.71 E-value=0.0051 Score=55.40 Aligned_cols=27 Identities=19% Similarity=0.185 Sum_probs=23.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.|+-.+.
T Consensus 29 ~Ge~~~iiG~nGsGKSTLl~~l~Gl~~ 55 (224)
T 2pcj_A 29 KGEFVSIIGASGSGKSTLLYILGLLDA 55 (224)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 467899999999999999999986653
No 221
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=95.71 E-value=0.0088 Score=54.32 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=31.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhC---CceeeCcHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLG---YTPLSTKELLET 223 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg---~~fID~D~lIE~ 223 (345)
.+-|.|+|++||||+|+|+.|.+.+| ++.+.+-+.+.+
T Consensus 11 ~~II~itGk~~SGKd~va~~l~~~~g~~~~~vv~msD~iK~ 51 (202)
T 3ch4_B 11 RLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKE 51 (202)
T ss_dssp SEEEEEEECTTSSHHHHHHHHHHHHCTTTEEEECTHHHHHH
T ss_pred CEEEEEECCCCCChHHHHHHHHHHcCCCCceEEEccHHHHH
Confidence 34677899999999999999999885 778888777753
No 222
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=95.65 E-value=0.007 Score=57.84 Aligned_cols=29 Identities=14% Similarity=0.120 Sum_probs=25.9
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..-++..+.|+|++||||||+.+.|+..+
T Consensus 122 ~i~~Ge~vaIvGpsGsGKSTLl~lL~gl~ 150 (305)
T 2v9p_A 122 GIPKKNCLAFIGPPNTGKSMLCNSLIHFL 150 (305)
T ss_dssp TCTTCSEEEEECSSSSSHHHHHHHHHHHH
T ss_pred EecCCCEEEEECCCCCcHHHHHHHHhhhc
Confidence 34468899999999999999999999887
No 223
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=95.64 E-value=0.0062 Score=53.18 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=29.7
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHh--h---------CCceeeCcH
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVG--L---------GYTPLSTKE 219 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~--L---------g~~fID~D~ 219 (345)
...+..+.|+|++|+||||+++.+|.. + +.-|++++.
T Consensus 21 i~~G~~~~i~G~~GsGKTtl~~~l~~~~~~~~~~g~~~~~~~~i~~~~ 68 (243)
T 1n0w_A 21 IETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEG 68 (243)
T ss_dssp EETTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSS
T ss_pred CcCCeEEEEECCCCCcHHHHHHHHHHHHhCchhcCCCCCeEEEEECCC
Confidence 345788999999999999999999983 3 355777765
No 224
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=95.62 E-value=0.032 Score=52.96 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=28.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh---C--CceeeCcHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL---G--YTPLSTKEL 220 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L---g--~~fID~D~l 220 (345)
+..|.|+|++|+||||++..||..+ | .-++|.|.+
T Consensus 104 ~~vi~ivG~~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~ 143 (306)
T 1vma_A 104 PFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTF 143 (306)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred CeEEEEEcCCCChHHHHHHHHHHHHHhcCCEEEEEccccc
Confidence 4578899999999999999999876 2 456677753
No 225
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=95.60 E-value=0.0067 Score=55.36 Aligned_cols=34 Identities=9% Similarity=-0.055 Sum_probs=30.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCceeeCcH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKE 219 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~ 219 (345)
+..++|.|++|+||||+.+.+++.+++-+++.+.
T Consensus 31 ~~~v~i~G~~G~GKT~Ll~~~~~~~~~~~~~~~~ 64 (350)
T 2qen_A 31 YPLTLLLGIRRVGKSSLLRAFLNERPGILIDCRE 64 (350)
T ss_dssp CSEEEEECCTTSSHHHHHHHHHHHSSEEEEEHHH
T ss_pred CCeEEEECCCcCCHHHHHHHHHHHcCcEEEEeec
Confidence 4789999999999999999999999888888754
No 226
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=95.57 E-value=0.0063 Score=58.14 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=25.7
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCce
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYTP 214 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~f 214 (345)
+..+.|+|++||||||+.+.|+..+....
T Consensus 170 g~k~~IvG~nGsGKSTLlk~L~gl~~~~~ 198 (365)
T 1lw7_A 170 AKTVAILGGESSGKSVLVNKLAAVFNTTS 198 (365)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEE
T ss_pred hCeEEEECCCCCCHHHHHHHHHHHhCCCc
Confidence 67899999999999999999999986543
No 227
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=95.56 E-value=0.004 Score=66.40 Aligned_cols=34 Identities=15% Similarity=0.078 Sum_probs=30.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
.+.+++|+|++|+||||+++.+|..++.+|+..+
T Consensus 510 ~~~~vLL~GppGtGKT~Lakala~~~~~~~i~v~ 543 (806)
T 1ypw_A 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543 (806)
T ss_dssp CCCCCCCBCCTTSSHHHHHHHHHHHHTCCCCCCC
T ss_pred CCceeEEECCCCCCHHHHHHHHHHHhCCCEEEEe
Confidence 4577999999999999999999999999888754
No 228
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=95.55 E-value=0.0064 Score=55.27 Aligned_cols=26 Identities=15% Similarity=0.206 Sum_probs=23.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.|+-.+
T Consensus 30 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~ 55 (237)
T 2cbz_A 30 EGALVAVVGQVGCGKSSLLSALLAEM 55 (237)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 57889999999999999999998665
No 229
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=95.54 E-value=0.0075 Score=62.86 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=27.9
Q ss_pred eEEEEcCCCCChHHHHHHHHHhhCCceeeCc
Q 019172 188 SIFLVGDSTEVNEKVALELAVGLGYTPLSTK 218 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D 218 (345)
+++|+|++|+|||++|+.+|+.++.+++..|
T Consensus 490 ~~ll~G~~GtGKT~la~~la~~l~~~~~~i~ 520 (758)
T 1r6b_X 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFD 520 (758)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEECCCCCcHHHHHHHHHHHhcCCEEEEe
Confidence 7999999999999999999999998877443
No 230
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=95.53 E-value=0.0093 Score=52.07 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=21.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+++-++++|+||+||||++..++..+
T Consensus 2 ~g~i~vi~G~~gsGKTT~ll~~~~~~ 27 (184)
T 2orw_A 2 SGKLTVITGPMYSGKTTELLSFVEIY 27 (184)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHHH
Confidence 46678899999999999997666654
No 231
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=95.51 E-value=0.008 Score=54.97 Aligned_cols=25 Identities=24% Similarity=0.189 Sum_probs=22.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+..+.|+|++||||||+.+.|+-.
T Consensus 28 ~Ge~~~l~G~nGsGKSTLlk~l~Gl 52 (250)
T 2d2e_A 28 KGEVHALMGPNGAGKSTLGKILAGD 52 (250)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 5778999999999999999999875
No 232
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=95.51 E-value=0.016 Score=53.75 Aligned_cols=28 Identities=21% Similarity=0.218 Sum_probs=24.7
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGYT 213 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~~ 213 (345)
+..++|.|++|+||||+++.+|+.++..
T Consensus 38 ~~~~ll~G~~G~GKT~la~~la~~l~~~ 65 (373)
T 1jr3_A 38 HHAYLFSGTRGVGKTSIARLLAKGLNCE 65 (373)
T ss_dssp CSEEEEESCTTSSHHHHHHHHHHHHSCT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3468999999999999999999999763
No 233
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=95.50 E-value=0.0067 Score=56.03 Aligned_cols=27 Identities=15% Similarity=0.083 Sum_probs=23.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+-.+.
T Consensus 31 ~Ge~~~liG~nGsGKSTLlk~l~Gl~~ 57 (262)
T 1b0u_A 31 AGDVISIIGSSGSGKSTFLRCINFLEK 57 (262)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 467899999999999999999987653
No 234
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=95.50 E-value=0.0067 Score=56.32 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=23.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 36 ~Ge~~~liG~nGsGKSTLl~~l~Gl~ 61 (266)
T 4g1u_C 36 SGEMVAIIGPNGAGKSTLLRLLTGYL 61 (266)
T ss_dssp TTCEEEEECCTTSCHHHHHHHHTSSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCC
Confidence 47789999999999999999998765
No 235
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=95.48 E-value=0.0088 Score=56.69 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=23.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..|.|+|++||||||+.+.||..+
T Consensus 101 ~g~vi~lvG~nGsGKTTll~~Lagll 126 (304)
T 1rj9_A 101 KGRVVLVVGVNGVGKTTTIAKLGRYY 126 (304)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHH
Confidence 46789999999999999999999776
No 236
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=95.46 E-value=0.0072 Score=54.96 Aligned_cols=27 Identities=15% Similarity=0.176 Sum_probs=23.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+-.+.
T Consensus 31 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~~ 57 (240)
T 1ji0_A 31 RGQIVTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 477899999999999999999987653
No 237
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=95.46 E-value=0.0071 Score=55.54 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=23.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+-.+.
T Consensus 32 ~Ge~~~liG~nGsGKSTLlk~l~Gl~~ 58 (257)
T 1g6h_A 32 KGDVTLIIGPNGSGKSTLINVITGFLK 58 (257)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 477899999999999999999987653
No 238
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=95.46 E-value=0.0071 Score=55.37 Aligned_cols=27 Identities=19% Similarity=0.074 Sum_probs=23.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+-.+.
T Consensus 34 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~ 60 (247)
T 2ff7_A 34 QGEVIGIVGRSGSGKSTLTKLIQRFYI 60 (247)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 477899999999999999999987753
No 239
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=95.44 E-value=0.0074 Score=54.49 Aligned_cols=27 Identities=11% Similarity=0.214 Sum_probs=23.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+-.+.
T Consensus 33 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~ 59 (229)
T 2pze_A 33 RGQLLAVAGSTGAGKTSLLMMIMGELE 59 (229)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCc
Confidence 578899999999999999999987653
No 240
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=95.42 E-value=0.0091 Score=55.19 Aligned_cols=27 Identities=11% Similarity=0.033 Sum_probs=24.0
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+..+.|+|++||||||+.+.|+..+
T Consensus 23 ~~g~~v~i~Gp~GsGKSTll~~l~g~~ 49 (261)
T 2eyu_A 23 RKMGLILVTGPTGSGKSTTIASMIDYI 49 (261)
T ss_dssp CSSEEEEEECSTTCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHhC
Confidence 357789999999999999999999875
No 241
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=95.42 E-value=0.027 Score=53.99 Aligned_cols=26 Identities=27% Similarity=0.165 Sum_probs=23.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
++..|.|+|++||||||+.+.||..+
T Consensus 128 ~g~vi~lvG~nGaGKTTll~~Lag~l 153 (328)
T 3e70_C 128 KPYVIMFVGFNGSGKTTTIAKLANWL 153 (328)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999876
No 242
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=95.41 E-value=0.0076 Score=53.96 Aligned_cols=25 Identities=24% Similarity=0.266 Sum_probs=22.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+..+.|+|++||||||+.+.|+-.
T Consensus 21 ~Ge~~~liG~nGsGKSTLl~~l~Gl 45 (208)
T 3b85_A 21 TNTIVFGLGPAGSGKTYLAMAKAVQ 45 (208)
T ss_dssp HCSEEEEECCTTSSTTHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcC
Confidence 4788999999999999999999864
No 243
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=95.40 E-value=0.0099 Score=51.07 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=29.5
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhC--CceeeCcH
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLG--YTPLSTKE 219 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg--~~fID~D~ 219 (345)
...+..+.|+|++|+||||+++.+|..-+ .-|++++.
T Consensus 17 i~~G~~~~i~G~~GsGKTtl~~~l~~~~~~~v~~i~~~~ 55 (220)
T 2cvh_A 17 FAPGVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEG 55 (220)
T ss_dssp BCTTSEEEEECSTTSSHHHHHHHHHHHHCSEEEEEESSC
T ss_pred CcCCEEEEEECCCCCCHHHHHHHHHHHcCCcEEEEECCC
Confidence 34578899999999999999999987433 55777765
No 244
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=95.40 E-value=0.0075 Score=56.45 Aligned_cols=26 Identities=12% Similarity=0.118 Sum_probs=23.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 33 ~Ge~~~iiGpnGsGKSTLl~~l~Gl~ 58 (275)
T 3gfo_A 33 RGEVTAILGGNGVGKSTLFQNFNGIL 58 (275)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCC
Confidence 47789999999999999999998765
No 245
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=95.39 E-value=0.0072 Score=54.95 Aligned_cols=26 Identities=15% Similarity=0.003 Sum_probs=23.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 27 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~ 52 (243)
T 1mv5_A 27 PNSIIAFAGPSGGGKSTIFSLLERFY 52 (243)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 57789999999999999999998765
No 246
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=95.38 E-value=0.0092 Score=56.45 Aligned_cols=26 Identities=27% Similarity=0.197 Sum_probs=23.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..|.|+|++||||||+.+.||..+
T Consensus 99 ~g~vi~lvG~nGsGKTTll~~Lag~l 124 (302)
T 3b9q_A 99 KPAVIMIVGVNGGGKTTSLGKLAHRL 124 (302)
T ss_dssp SCEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 35678999999999999999999876
No 247
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=95.37 E-value=0.0094 Score=55.20 Aligned_cols=26 Identities=15% Similarity=0.123 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 45 ~Ge~~~l~G~NGsGKSTLlk~l~Gl~ 70 (267)
T 2zu0_C 45 PGEVHAIMGPNGSGKSTLSATLAGRE 70 (267)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 46789999999999999999998763
No 248
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=95.37 E-value=0.0053 Score=56.72 Aligned_cols=26 Identities=19% Similarity=0.156 Sum_probs=24.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
..+|+|.|++|+|||++++.+|+.++
T Consensus 45 ~~~vLl~G~~GtGKT~la~~la~~~~ 70 (350)
T 1g8p_A 45 IGGVLVFGDRGTGKSTAVRALAALLP 70 (350)
T ss_dssp GCCEEEECCGGGCTTHHHHHHHHHSC
T ss_pred CceEEEECCCCccHHHHHHHHHHhCc
Confidence 45699999999999999999999987
No 249
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=95.36 E-value=0.008 Score=55.86 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=23.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.|+-.+.
T Consensus 49 ~Gei~~liG~NGsGKSTLlk~l~Gl~~ 75 (263)
T 2olj_A 49 EGEVVVVIGPSGSGKSTFLRCLNLLED 75 (263)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEEcCCCCcHHHHHHHHHcCCC
Confidence 467799999999999999999987653
No 250
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=95.35 E-value=0.0081 Score=55.40 Aligned_cols=25 Identities=16% Similarity=0.178 Sum_probs=22.9
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+++|.|++|+||||+++.+|+.++
T Consensus 59 ~~~ll~G~~G~GKT~la~~la~~l~ 83 (353)
T 1sxj_D 59 PHMLFYGPPGTGKTSTILALTKELY 83 (353)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4599999999999999999999875
No 251
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=95.33 E-value=0.014 Score=53.61 Aligned_cols=33 Identities=9% Similarity=0.079 Sum_probs=27.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLST 217 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~ 217 (345)
+..+|+|.|++|+||||++..||+.++-..+..
T Consensus 57 kkn~ili~GPPGtGKTt~a~ala~~l~g~i~~f 89 (212)
T 1tue_A 57 KKNCLVFCGPANTGKSYFGMSFIHFIQGAVISF 89 (212)
T ss_dssp TCSEEEEESCGGGCHHHHHHHHHHHHTCEECCC
T ss_pred cccEEEEECCCCCCHHHHHHHHHHHhCCCeeeE
Confidence 345799999999999999999999987655543
No 252
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=95.31 E-value=0.0084 Score=55.70 Aligned_cols=27 Identities=26% Similarity=0.142 Sum_probs=23.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.|+-.+.
T Consensus 44 ~Ge~~~i~G~nGsGKSTLlk~l~Gl~~ 70 (271)
T 2ixe_A 44 PGKVTALVGPNGSGKSTVAALLQNLYQ 70 (271)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 577899999999999999999987663
No 253
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=95.31 E-value=0.0085 Score=55.27 Aligned_cols=26 Identities=27% Similarity=0.198 Sum_probs=23.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 45 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~ 70 (260)
T 2ghi_A 45 SGTTCALVGHTGSGKSTIAKLLYRFY 70 (260)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhccC
Confidence 57889999999999999999998765
No 254
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=95.31 E-value=0.0079 Score=54.22 Aligned_cols=26 Identities=15% Similarity=0.157 Sum_probs=23.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.|+-.+
T Consensus 34 ~Ge~~~iiG~NGsGKSTLlk~l~Gl~ 59 (214)
T 1sgw_A 34 KGNVVNFHGPNGIGKTTLLKTISTYL 59 (214)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 46779999999999999999998765
No 255
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=95.31 E-value=0.0067 Score=54.88 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=22.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+++|.|++|+|||++++.+|+.+
T Consensus 39 ~~~ll~G~~G~GKt~la~~l~~~l 62 (319)
T 2chq_A 39 PHLLFSGPPGTGKTATAIALARDL 62 (319)
T ss_dssp CCEEEESSSSSSHHHHHHHHHHHH
T ss_pred CeEEEECcCCcCHHHHHHHHHHHh
Confidence 359999999999999999999987
No 256
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=95.31 E-value=0.012 Score=54.70 Aligned_cols=24 Identities=13% Similarity=0.243 Sum_probs=21.7
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+++|+|++|+||||+++.+|..+
T Consensus 37 ~~~ll~Gp~G~GKTtl~~~la~~l 60 (354)
T 1sxj_E 37 PHLLLYGPNGTGKKTRCMALLESI 60 (354)
T ss_dssp CCEEEECSTTSSHHHHHHTHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 349999999999999999999965
No 257
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=95.28 E-value=0.024 Score=58.04 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=27.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh----CCcee-eCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL----GYTPL-STKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L----g~~fI-D~D~ 219 (345)
.+..|.|+|++||||||+.+.||..+ |-..+ +.|.
T Consensus 292 ~GeVI~LVGpNGSGKTTLl~~LAgll~~~~G~V~l~g~D~ 331 (503)
T 2yhs_A 292 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDT 331 (503)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEECCCT
T ss_pred CCeEEEEECCCcccHHHHHHHHHHHhhhcCCeEEEecCcc
Confidence 36689999999999999999999876 33444 4564
No 258
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=95.27 E-value=0.013 Score=53.10 Aligned_cols=24 Identities=17% Similarity=0.068 Sum_probs=22.2
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+++|.|++|+||||+++.+|+.+
T Consensus 43 ~~~ll~G~~G~GKt~la~~l~~~l 66 (323)
T 1sxj_B 43 PHMIISGMPGIGKTTSVHCLAHEL 66 (323)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHH
T ss_pred CeEEEECcCCCCHHHHHHHHHHHh
Confidence 349999999999999999999987
No 259
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=95.27 E-value=0.0093 Score=55.90 Aligned_cols=24 Identities=13% Similarity=0.162 Sum_probs=22.2
Q ss_pred eEEEEcCCCCChHHHHHHHHHhhC
Q 019172 188 SIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
+++|.|++|+||||+++.+|..+.
T Consensus 48 ~~ll~Gp~G~GKTtla~~la~~l~ 71 (340)
T 1sxj_C 48 HLLFYGPPGTGKTSTIVALAREIY 71 (340)
T ss_dssp CEEEECSSSSSHHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHc
Confidence 489999999999999999999974
No 260
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=95.26 E-value=0.019 Score=49.74 Aligned_cols=34 Identities=9% Similarity=-0.009 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh----CCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL----GYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L----g~~fID~D 218 (345)
+...|+|+|.+|+||||+...|+..+ ..+.++.|
T Consensus 37 ~~~~i~ivG~~gvGKTtl~~~l~~~~~~~~~~~~i~~d 74 (226)
T 2hf9_A 37 GVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGD 74 (226)
T ss_dssp TCEEEEEEESTTSSHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 45789999999999999999999875 23445544
No 261
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=95.26 E-value=0.0092 Score=63.54 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=29.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh----------CCceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL----------GYTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L----------g~~fID~D 218 (345)
...+++|+|++|+|||++++.||+.+ +.+++..|
T Consensus 190 ~~~~vlL~G~pG~GKT~la~~la~~l~~~~~p~~l~~~~~~~l~ 233 (854)
T 1qvr_A 190 TKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQ 233 (854)
T ss_dssp SCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEEC
T ss_pred CCCceEEEcCCCCCHHHHHHHHHHHHhcCCCchhhcCCeEEEee
Confidence 45689999999999999999999998 77776554
No 262
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=95.24 E-value=0.0092 Score=54.94 Aligned_cols=26 Identities=19% Similarity=0.192 Sum_probs=23.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 25 ~Ge~~~liG~NGsGKSTLlk~l~Gl~ 50 (249)
T 2qi9_C 25 AGEILHLVGPNGAGKSTLLARMAGMT 50 (249)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 57789999999999999999998765
No 263
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=95.24 E-value=0.0092 Score=55.12 Aligned_cols=26 Identities=12% Similarity=0.224 Sum_probs=23.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 32 ~Ge~~~liG~nGsGKSTLl~~i~Gl~ 57 (266)
T 2yz2_A 32 EGECLLVAGNTGSGKSTLLQIVAGLI 57 (266)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 47789999999999999999998765
No 264
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=95.24 E-value=0.016 Score=50.50 Aligned_cols=38 Identities=8% Similarity=0.004 Sum_probs=29.2
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhh-----CCceeeCcHH
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGL-----GYTPLSTKEL 220 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~L-----g~~fID~D~l 220 (345)
...+..+.|+|++|+||||++..+|..+ +.-|++++.-
T Consensus 20 l~~G~~~~i~G~~GsGKTtl~~~~~~~~~~~~~~v~~~~~e~~ 62 (247)
T 2dr3_A 20 IPERNVVLLSGGPGTGKTIFSQQFLWNGLKMGEPGIYVALEEH 62 (247)
T ss_dssp EETTCEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccCC
Confidence 3457889999999999999988876543 4567777643
No 265
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=95.23 E-value=0.0092 Score=55.83 Aligned_cols=27 Identities=19% Similarity=0.030 Sum_probs=23.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.|+-.+.
T Consensus 46 ~Ge~~~liG~NGsGKSTLlk~l~Gl~~ 72 (279)
T 2ihy_A 46 KGDKWILYGLNGAGKTTLLNILNAYEP 72 (279)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 467899999999999999999987653
No 266
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=95.20 E-value=0.0096 Score=55.02 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=23.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+-.+.
T Consensus 40 ~Gei~~l~G~NGsGKSTLlk~l~Gl~~ 66 (256)
T 1vpl_A 40 EGEIFGLIGPNGAGKTTTLRIISTLIK 66 (256)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CCcEEEEECCCCCCHHHHHHHHhcCCC
Confidence 467799999999999999999987653
No 267
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=95.15 E-value=0.0068 Score=52.83 Aligned_cols=25 Identities=16% Similarity=0.116 Sum_probs=22.2
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
+.|.|+|.+||||||+.+.|+..+.
T Consensus 3 ~~v~IvG~SGsGKSTL~~~L~~~~~ 27 (171)
T 2f1r_A 3 LILSIVGTSDSGKTTLITRMMPILR 27 (171)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhh
Confidence 4688999999999999999998864
No 268
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=95.10 E-value=0.012 Score=55.19 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=27.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh---CCceeeC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL---GYTPLST 217 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L---g~~fID~ 217 (345)
.+.+|+|+|.+|+|||++|+.++... +.+|+..
T Consensus 24 ~~~~vLi~Ge~GtGKt~lAr~i~~~~~~~~~~~v~v 59 (304)
T 1ojl_A 24 SDATVLIHGDSGTGKELVARALHACSARSDRPLVTL 59 (304)
T ss_dssp TTSCEEEESCTTSCHHHHHHHHHHHSSCSSSCCCEE
T ss_pred CCCcEEEECCCCchHHHHHHHHHHhCcccCCCeEEE
Confidence 46789999999999999999999965 4555433
No 269
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=95.08 E-value=0.014 Score=54.93 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=29.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh----C--CceeeCcHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL----G--YTPLSTKEL 220 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L----g--~~fID~D~l 220 (345)
++..|.|+|+.|+||||++..||..+ | .-++|.|..
T Consensus 104 ~g~vi~lvG~~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~ 145 (296)
T 2px0_A 104 HSKYIVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTY 145 (296)
T ss_dssp CSSEEEEEESTTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc
Confidence 46789999999999999999998655 3 357888863
No 270
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=95.08 E-value=0.011 Score=54.43 Aligned_cols=26 Identities=15% Similarity=0.017 Sum_probs=23.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 30 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~ 55 (253)
T 2nq2_C 30 KGDILAVLGQNGCGKSTLLDLLLGIH 55 (253)
T ss_dssp TTCEEEEECCSSSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 47789999999999999999998765
No 271
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=95.05 E-value=0.017 Score=60.26 Aligned_cols=26 Identities=27% Similarity=0.294 Sum_probs=24.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+.+++|+|++|+|||++++.||+.+
T Consensus 206 ~~~~vlL~G~~GtGKT~la~~la~~l 231 (758)
T 1r6b_X 206 RKNNPLLVGESGVGKTAIAEGLAWRI 231 (758)
T ss_dssp SSCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHHH
Confidence 57889999999999999999999988
No 272
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=95.05 E-value=0.015 Score=53.29 Aligned_cols=29 Identities=14% Similarity=0.065 Sum_probs=24.9
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
....+..++|+|++|+||||+++.+|..+
T Consensus 31 ~l~~G~~~~i~G~~G~GKTTl~~~ia~~~ 59 (296)
T 1cr0_A 31 GARGGEVIMVTSGSGMGKSTFVRQQALQW 59 (296)
T ss_dssp SBCTTCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 34467889999999999999999988765
No 273
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=95.04 E-value=0.018 Score=48.52 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=22.3
Q ss_pred eEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 188 SIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
..+|+|++||||||+.++|+-.|+-
T Consensus 28 ~~~i~G~NGsGKStll~ai~~~l~~ 52 (182)
T 3kta_A 28 FTAIVGANGSGKSNIGDAILFVLGG 52 (182)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHTTC
T ss_pred cEEEECCCCCCHHHHHHHHHHHHcC
Confidence 5779999999999999999988863
No 274
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=95.03 E-value=0.013 Score=53.52 Aligned_cols=24 Identities=13% Similarity=-0.029 Sum_probs=21.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+.|+|++||||||+.+.|+-.+
T Consensus 25 e~~~liG~nGsGKSTLl~~l~Gl~ 48 (240)
T 2onk_A 25 DYCVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEEECCCCCCHHHHHHHHhCCC
Confidence 568899999999999999999765
No 275
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=95.01 E-value=0.015 Score=51.04 Aligned_cols=24 Identities=8% Similarity=0.001 Sum_probs=21.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..|.|+|++||||||+...|+..|
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l 28 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAA 28 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhh
Confidence 468899999999999999999875
No 276
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=95.01 E-value=0.012 Score=56.75 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=24.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..|.|+|++||||||+.+.|+..+.
T Consensus 174 ~G~~i~ivG~sGsGKSTll~~l~~~~~ 200 (361)
T 2gza_A 174 LERVIVVAGETGSGKTTLMKALMQEIP 200 (361)
T ss_dssp TTCCEEEEESSSSCHHHHHHHHHTTSC
T ss_pred cCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 578999999999999999999998765
No 277
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=94.98 E-value=0.014 Score=46.61 Aligned_cols=24 Identities=13% Similarity=0.217 Sum_probs=21.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+++|.+|+||||+...|...
T Consensus 3 ~~~i~v~G~~~~GKssl~~~l~~~ 26 (166)
T 2ce2_X 3 EYKLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred eeEEEEECCCCCCHHHHHHHHHhC
Confidence 357999999999999999998764
No 278
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=94.97 E-value=0.018 Score=49.66 Aligned_cols=34 Identities=6% Similarity=0.040 Sum_probs=27.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC----CceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG----YTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg----~~fID~D 218 (345)
+...|+|+|.+|+||||+...|+..+. ...++.|
T Consensus 29 ~~~~i~i~G~~g~GKTTl~~~l~~~~~~~~~~~~i~~d 66 (221)
T 2wsm_A 29 GTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGD 66 (221)
T ss_dssp TCEEEEEEECTTSCHHHHHHHHHHHHTTTSCEEEEECS
T ss_pred CceEEEEEcCCCCCHHHHHHHHHHHhccCCeEEEEecC
Confidence 456899999999999999999998763 3445554
No 279
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=94.96 E-value=0.017 Score=52.42 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=23.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
..+++|.|++|+||||+++.+|+.+.
T Consensus 46 ~~~~ll~G~~G~GKT~la~~l~~~l~ 71 (327)
T 1iqp_A 46 MPHLLFAGPPGVGKTTAALALARELF 71 (327)
T ss_dssp CCEEEEESCTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEECcCCCCHHHHHHHHHHHhc
Confidence 34699999999999999999999974
No 280
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=94.87 E-value=0.014 Score=51.90 Aligned_cols=28 Identities=18% Similarity=0.172 Sum_probs=24.2
Q ss_pred EEEEcCCCCChHHHHHHHHHhhCCc--eeeC
Q 019172 189 IFLVGDSTEVNEKVALELAVGLGYT--PLST 217 (345)
Q Consensus 189 IvLIG~~GSGKSTVAk~LA~~Lg~~--fID~ 217 (345)
|+|+|.+||||||+|+.||.. |.+ |+++
T Consensus 2 ilV~Gg~~SGKS~~A~~la~~-~~~~~yiaT 31 (180)
T 1c9k_A 2 ILVTGGARSGKSRHAEALIGD-APQVLYIAT 31 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCS-CSSEEEEEC
T ss_pred EEEECCCCCcHHHHHHHHHhc-CCCeEEEec
Confidence 789999999999999999987 754 6666
No 281
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=94.82 E-value=0.012 Score=59.70 Aligned_cols=30 Identities=27% Similarity=0.407 Sum_probs=26.3
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
...+.+|+|+|++|+|||++|+.||..++.
T Consensus 38 l~~~~~VLL~GpPGtGKT~LAraLa~~l~~ 67 (500)
T 3nbx_X 38 ALSGESVFLLGPPGIAKSLIARRLKFAFQN 67 (500)
T ss_dssp HHHTCEEEEECCSSSSHHHHHHHGGGGBSS
T ss_pred HhcCCeeEeecCchHHHHHHHHHHHHHHhh
Confidence 345789999999999999999999998853
No 282
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=94.80 E-value=0.019 Score=52.31 Aligned_cols=27 Identities=30% Similarity=0.293 Sum_probs=23.3
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+..+.|+|++|+||||++..++..+
T Consensus 28 ~~G~i~~i~G~~GsGKTtl~~~l~~~~ 54 (279)
T 1nlf_A 28 VAGTVGALVSPGGAGKSMLALQLAAQI 54 (279)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 367889999999999999999988643
No 283
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=94.78 E-value=0.017 Score=56.39 Aligned_cols=26 Identities=27% Similarity=0.197 Sum_probs=23.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..|.|+|++||||||+.+.||..+
T Consensus 156 ~g~vi~lvG~nGsGKTTll~~Lag~l 181 (359)
T 2og2_A 156 KPAVIMIVGVNGGGKTTSLGKLAHRL 181 (359)
T ss_dssp SSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCChHHHHHHHHHhhc
Confidence 35678999999999999999999876
No 284
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=94.76 E-value=0.017 Score=56.47 Aligned_cols=26 Identities=23% Similarity=0.158 Sum_probs=23.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.+|-.+
T Consensus 29 ~Ge~~~llGpsGsGKSTLLr~iaGl~ 54 (359)
T 3fvq_A 29 PGEILFIIGASGCGKTTLLRCLAGFE 54 (359)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCchHHHHHHHHhcCC
Confidence 46779999999999999999999765
No 285
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=94.75 E-value=0.018 Score=46.24 Aligned_cols=25 Identities=8% Similarity=0.312 Sum_probs=21.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 2 ~~~~i~v~G~~~~GKSsli~~l~~~ 26 (167)
T 1kao_A 2 REYKVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHHS
T ss_pred cEEEEEEECCCCCCHHHHHHHHHcC
Confidence 3468999999999999999888754
No 286
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=94.74 E-value=0.016 Score=48.22 Aligned_cols=25 Identities=20% Similarity=0.197 Sum_probs=22.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|+..
T Consensus 6 ~~~~i~lvG~~gvGKStL~~~l~~~ 30 (188)
T 2wjg_A 6 KSYEIALIGNPNVGKSTIFNALTGE 30 (188)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 4568999999999999999999763
No 287
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=94.73 E-value=0.023 Score=54.75 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=31.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lI 221 (345)
.++.++|+|.+|+||||++..|.++ |..++.-|...
T Consensus 143 ~g~~vl~~G~sG~GKSt~a~~l~~~-g~~lv~dD~~~ 178 (314)
T 1ko7_A 143 YGVGVLITGDSGIGKSETALELIKR-GHRLVADDNVE 178 (314)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHT-TCEEEESSEEE
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHhc-CCceecCCeEE
Confidence 4788999999999999999999886 99998666543
No 288
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=94.70 E-value=0.017 Score=47.78 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=20.5
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
...|+|+|.+|+||||+...|+.
T Consensus 3 ~~~v~lvG~~gvGKStL~~~l~~ 25 (165)
T 2wji_A 3 SYEIALIGNPNVGKSTIFNALTG 25 (165)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHC
T ss_pred ccEEEEECCCCCCHHHHHHHHhC
Confidence 35799999999999999999975
No 289
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=94.70 E-value=0.015 Score=53.98 Aligned_cols=25 Identities=12% Similarity=0.232 Sum_probs=22.5
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+..+.|+|++||||||+.+.|+-.+
T Consensus 30 Ge~~~i~G~NGsGKSTLlk~l~Gl~ 54 (263)
T 2pjz_A 30 GEKVIILGPNGSGKTTLLRAISGLL 54 (263)
T ss_dssp SSEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEEECCCCCCHHHHHHHHhCCC
Confidence 6779999999999999999998664
No 290
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=94.68 E-value=0.025 Score=50.26 Aligned_cols=35 Identities=11% Similarity=0.109 Sum_probs=27.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh--C--CceeeCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL--G--YTPLSTKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L--g--~~fID~D~ 219 (345)
+...++++|..|+||||++..||..+ | ...+|.|-
T Consensus 13 ~~~i~~~~GkgGvGKTTl~~~La~~l~~g~~v~vvd~D~ 51 (262)
T 1yrb_A 13 ASMIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDT 51 (262)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHTTTSCEEEEECCS
T ss_pred ceEEEEEeCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45568889999999999999999765 3 44678773
No 291
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=94.65 E-value=0.016 Score=54.58 Aligned_cols=26 Identities=12% Similarity=0.233 Sum_probs=23.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 63 ~Ge~~~i~G~NGsGKSTLlk~l~Gl~ 88 (290)
T 2bbs_A 63 RGQLLAVAGSTGAGKTSLLMMIMGEL 88 (290)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCC
Confidence 57889999999999999999998665
No 292
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=94.62 E-value=0.02 Score=58.67 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=26.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYT 213 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~ 213 (345)
.+..++|+|++|+||||+++.+|..+...
T Consensus 59 ~g~~vll~Gp~GtGKTtlar~ia~~l~~~ 87 (604)
T 3k1j_A 59 QKRHVLLIGEPGTGKSMLGQAMAELLPTE 87 (604)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHHHTSCCS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHhccCCcc
Confidence 56899999999999999999999998654
No 293
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=94.62 E-value=0.019 Score=53.21 Aligned_cols=24 Identities=21% Similarity=0.136 Sum_probs=21.7
Q ss_pred eEEEEcCCCCChHHHHHHHHHhhC
Q 019172 188 SIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
++.|+|++||||||+-+.|+..+.
T Consensus 4 ~v~lvG~nGaGKSTLln~L~g~~~ 27 (270)
T 3sop_A 4 NIMVVGQSGLGKSTLVNTLFKSQV 27 (270)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhCCCC
Confidence 688999999999999999998763
No 294
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=94.61 E-value=0.021 Score=59.71 Aligned_cols=29 Identities=17% Similarity=0.219 Sum_probs=25.0
Q ss_pred eEEEEcCCCCChHHHHHHHHHhh---CCceee
Q 019172 188 SIFLVGDSTEVNEKVALELAVGL---GYTPLS 216 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~L---g~~fID 216 (345)
+++|.|++|+|||++|+.+|+.+ +.+|+.
T Consensus 523 ~~Ll~Gp~GtGKT~lA~ala~~l~~~~~~~i~ 554 (758)
T 3pxi_A 523 SFIFLGPTGVGKTELARALAESIFGDEESMIR 554 (758)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHHSCTTCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhcCCCcceEE
Confidence 69999999999999999999998 455543
No 295
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=94.60 E-value=0.01 Score=56.56 Aligned_cols=27 Identities=22% Similarity=0.146 Sum_probs=23.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.|+..+.
T Consensus 79 ~Ge~vaivG~sGsGKSTLl~ll~gl~~ 105 (306)
T 3nh6_A 79 PGQTLALVGPSGAGKSTILRLLFRFYD 105 (306)
T ss_dssp TTCEEEEESSSCHHHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCchHHHHHHHHHcCCC
Confidence 477899999999999999999987664
No 296
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=94.60 E-value=0.02 Score=55.82 Aligned_cols=26 Identities=19% Similarity=0.083 Sum_probs=23.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.||-.+
T Consensus 40 ~Ge~~~llGpnGsGKSTLLr~iaGl~ 65 (355)
T 1z47_A 40 EGEMVGLLGPSGSGKTTILRLIAGLE 65 (355)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 46779999999999999999999665
No 297
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=94.59 E-value=0.02 Score=45.92 Aligned_cols=25 Identities=12% Similarity=0.209 Sum_probs=21.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 3 ~~~~i~v~G~~~~GKssl~~~l~~~ 27 (168)
T 1u8z_A 3 ALHKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred ceEEEEEECCCCCCHHHHHHHHHhC
Confidence 3468999999999999999988754
No 298
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=94.58 E-value=0.02 Score=56.48 Aligned_cols=27 Identities=19% Similarity=0.068 Sum_probs=23.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.||-.+.
T Consensus 28 ~Ge~~~llGpsGsGKSTLLr~iaGl~~ 54 (381)
T 3rlf_A 28 EGEFVVFVGPSGCGKSTLLRMIAGLET 54 (381)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEEcCCCchHHHHHHHHHcCCC
Confidence 467799999999999999999997663
No 299
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=94.57 E-value=0.073 Score=53.48 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=28.7
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh---C--CceeeCcHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL---G--YTPLSTKEL 220 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L---g--~~fID~D~l 220 (345)
+..|+++|++|+||||++..||..| | .-++++|.+
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~ 139 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTW 139 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5678999999999999999999765 3 346888865
No 300
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=94.56 E-value=0.044 Score=49.89 Aligned_cols=32 Identities=9% Similarity=-0.007 Sum_probs=26.9
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhCC--ceeeCc
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLGY--TPLSTK 218 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg~--~fID~D 218 (345)
..++|.|++|+||||+.+.+++.++. .++++.
T Consensus 31 ~~v~i~G~~G~GKT~L~~~~~~~~~~~~~~~~~~ 64 (357)
T 2fna_A 31 PITLVLGLRRTGKSSIIKIGINELNLPYIYLDLR 64 (357)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGG
T ss_pred CcEEEECCCCCCHHHHHHHHHHhcCCCEEEEEch
Confidence 68999999999999999999998764 456654
No 301
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=94.55 E-value=0.021 Score=55.73 Aligned_cols=26 Identities=27% Similarity=0.152 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.||-.+
T Consensus 28 ~Ge~~~llGpnGsGKSTLLr~iaGl~ 53 (359)
T 2yyz_A 28 DGEFVALLGPSGCGKTTTLLMLAGIY 53 (359)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEEcCCCchHHHHHHHHHCCC
Confidence 46779999999999999999999765
No 302
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=94.54 E-value=0.18 Score=43.77 Aligned_cols=33 Identities=12% Similarity=0.072 Sum_probs=27.2
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKE 219 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~ 219 (345)
|+|.+.|-.|+||||++..||..|. .-.||+|-
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4578899999999999999999884 34678775
No 303
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=94.53 E-value=0.021 Score=55.76 Aligned_cols=27 Identities=19% Similarity=0.150 Sum_probs=23.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.||-.+.
T Consensus 28 ~Ge~~~llGpnGsGKSTLLr~iaGl~~ 54 (362)
T 2it1_A 28 DGEFMALLGPSGSGKSTLLYTIAGIYK 54 (362)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEECCCCchHHHHHHHHhcCCC
Confidence 467799999999999999999997653
No 304
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=94.51 E-value=0.022 Score=48.52 Aligned_cols=24 Identities=17% Similarity=0.201 Sum_probs=21.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..|.|+|++|+||||+.+.|+...
T Consensus 30 ~kv~lvG~~g~GKSTLl~~l~~~~ 53 (191)
T 1oix_A 30 FKVVLIGDSGVGKSNLLSRFTRNE 53 (191)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHSC
T ss_pred eEEEEECcCCCCHHHHHHHHhcCC
Confidence 478999999999999999998654
No 305
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=94.50 E-value=0.023 Score=45.65 Aligned_cols=23 Identities=13% Similarity=0.135 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 2 ~ki~v~G~~~~GKSsli~~l~~~ 24 (161)
T 2dyk_A 2 HKVVIVGRPNVGKSSLFNRLLKK 24 (161)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47999999999999999998764
No 306
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=94.45 E-value=0.024 Score=48.34 Aligned_cols=23 Identities=17% Similarity=0.250 Sum_probs=20.8
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|.|+|.+|+||||+.+.|+..
T Consensus 6 ~kv~lvG~~g~GKSTLl~~l~~~ 28 (199)
T 2f9l_A 6 FKVVLIGDSGVGKSNLLSRFTRN 28 (199)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEEECcCCCCHHHHHHHHhcC
Confidence 46899999999999999999865
No 307
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=94.45 E-value=0.023 Score=47.64 Aligned_cols=24 Identities=17% Similarity=0.237 Sum_probs=21.6
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+.+|+|+|.+|+||||+...|+..
T Consensus 4 ~~ki~ivG~~g~GKStLl~~l~~~ 27 (172)
T 2gj8_A 4 GMKVVIAGRPNAGKSSLLNALAGR 27 (172)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 568999999999999999999864
No 308
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=94.45 E-value=0.022 Score=55.75 Aligned_cols=26 Identities=19% Similarity=0.050 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.||-.+
T Consensus 36 ~Ge~~~llGpnGsGKSTLLr~iaGl~ 61 (372)
T 1v43_A 36 DGEFLVLLGPSGCGKTTTLRMIAGLE 61 (372)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCChHHHHHHHHHcCC
Confidence 46779999999999999999999765
No 309
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=94.44 E-value=0.022 Score=55.61 Aligned_cols=26 Identities=19% Similarity=0.058 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.||-.+
T Consensus 28 ~Ge~~~llGpnGsGKSTLLr~iaGl~ 53 (372)
T 1g29_1 28 DGEFMILLGPSGCGKTTTLRMIAGLE 53 (372)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHcCC
Confidence 46779999999999999999999665
No 310
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=94.43 E-value=0.022 Score=55.15 Aligned_cols=27 Identities=11% Similarity=0.065 Sum_probs=23.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..|.|+|++||||||+.+.|+..+.
T Consensus 135 ~g~~i~ivG~~GsGKTTll~~l~~~~~ 161 (372)
T 2ewv_A 135 KMGLILVTGPTGSGKSTTIASMIDYIN 161 (372)
T ss_dssp SSEEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhcC
Confidence 467899999999999999999998764
No 311
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=94.42 E-value=0.026 Score=49.32 Aligned_cols=24 Identities=13% Similarity=0.003 Sum_probs=21.2
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..|.|+|++||||||+.+.|...+
T Consensus 7 ~~i~i~G~sGsGKTTl~~~l~~~l 30 (174)
T 1np6_A 7 PLLAFAAWSGTGKTTLLKKLIPAL 30 (174)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhc
Confidence 468899999999999999998764
No 312
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=94.40 E-value=0.024 Score=45.71 Aligned_cols=24 Identities=8% Similarity=0.263 Sum_probs=21.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 3 ~~ki~v~G~~~~GKssli~~l~~~ 26 (167)
T 1c1y_A 3 EYKLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHC
T ss_pred eeEEEEECCCCCCHHHHHHHHHcC
Confidence 457999999999999999998753
No 313
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=94.38 E-value=0.023 Score=55.69 Aligned_cols=27 Identities=11% Similarity=-0.004 Sum_probs=23.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+-.+.
T Consensus 53 ~Gei~~IiGpnGaGKSTLlr~i~GL~~ 79 (366)
T 3tui_C 53 AGQIYGVIGASGAGKSTLIRCVNLLER 79 (366)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCC
Confidence 467799999999999999999987653
No 314
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=94.35 E-value=0.031 Score=52.45 Aligned_cols=29 Identities=24% Similarity=0.271 Sum_probs=24.9
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
..+.+..+.|+|++|+||||+.+.|+ .+.
T Consensus 161 ~~l~G~i~~l~G~sG~GKSTLln~l~-~~~ 189 (302)
T 2yv5_A 161 DYLEGFICILAGPSGVGKSSILSRLT-GEE 189 (302)
T ss_dssp HHTTTCEEEEECSTTSSHHHHHHHHH-SCC
T ss_pred hhccCcEEEEECCCCCCHHHHHHHHH-Hhh
Confidence 45668889999999999999999998 543
No 315
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=94.31 E-value=0.018 Score=54.91 Aligned_cols=27 Identities=7% Similarity=0.108 Sum_probs=24.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+.|+|++||||||+.+.|+..+.
T Consensus 170 ~g~~v~i~G~~GsGKTTll~~l~g~~~ 196 (330)
T 2pt7_A 170 IGKNVIVCGGTGSGKTTYIKSIMEFIP 196 (330)
T ss_dssp HTCCEEEEESTTSCHHHHHHHGGGGSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCc
Confidence 478899999999999999999998764
No 316
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=94.29 E-value=0.017 Score=55.95 Aligned_cols=26 Identities=12% Similarity=0.004 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.||-.+
T Consensus 25 ~Ge~~~llGpnGsGKSTLLr~iaGl~ 50 (348)
T 3d31_A 25 SGEYFVILGPTGAGKTLFLELIAGFH 50 (348)
T ss_dssp TTCEEEEECCCTHHHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCccHHHHHHHHHcCC
Confidence 46779999999999999999999665
No 317
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=94.29 E-value=0.029 Score=45.27 Aligned_cols=24 Identities=13% Similarity=0.259 Sum_probs=21.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 5 ~~~i~v~G~~~~GKssl~~~l~~~ 28 (168)
T 1z2a_A 5 AIKMVVVGNGAVGKSSMIQRYCKG 28 (168)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHC
T ss_pred eEEEEEECcCCCCHHHHHHHHHcC
Confidence 357999999999999999998764
No 318
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=94.28 E-value=0.018 Score=57.31 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=28.7
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcH
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKE 219 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~ 219 (345)
..|.|+|++|+||||++..||..+. .-++|+|.
T Consensus 100 ~vI~ivG~~GvGKTTla~~La~~l~~~G~kVllv~~D~ 137 (432)
T 2v3c_C 100 NVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADT 137 (432)
T ss_dssp CCEEEECCSSSSTTHHHHHHHHHHHHHHCCEEEECCSC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 5799999999999999999998863 67888884
No 319
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=94.22 E-value=0.026 Score=55.54 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=23.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.++||-.+
T Consensus 46 ~Ge~~~llGpsGsGKSTLLr~iaGl~ 71 (390)
T 3gd7_A 46 PGQRVGLLGRTGSGKSTLLSAFLRLL 71 (390)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTCS
T ss_pred CCCEEEEECCCCChHHHHHHHHhCCC
Confidence 57889999999999999999998654
No 320
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=94.21 E-value=0.029 Score=53.59 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=27.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh---C--CceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL---G--YTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L---g--~~fID~D 218 (345)
...|.|+|.+|+||||+...|+..+ | ..++|.|
T Consensus 79 ~~~I~i~G~~G~GKSTl~~~L~~~l~~~g~kV~vi~~D 116 (355)
T 3p32_A 79 AHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVD 116 (355)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHHhCCCceEEEecC
Confidence 4579999999999999999999876 3 4567777
No 321
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=94.18 E-value=0.036 Score=45.57 Aligned_cols=26 Identities=12% Similarity=0.061 Sum_probs=22.0
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+..+|+|+|.+|+||||+...+...
T Consensus 6 ~~~~ki~v~G~~~~GKssl~~~~~~~ 31 (182)
T 3bwd_D 6 SRFIKCVTVGDGAVGKTCLLISYTSN 31 (182)
T ss_dssp -CCCEEEEECSTTSSHHHHHHHHHHS
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcC
Confidence 34678999999999999999988754
No 322
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=94.14 E-value=0.027 Score=56.50 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=29.3
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhh----C-C-ceeeCc
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGL----G-Y-TPLSTK 218 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~L----g-~-~fID~D 218 (345)
.-.|..+.|+|++||||||+.|.|+-.+ | - -++|.|
T Consensus 135 i~~Ge~v~IvGpnGsGKSTLlr~L~Gl~~p~~G~~pI~vdg~ 176 (460)
T 2npi_A 135 NFEGPRVVIVGGSQTGKTSLSRTLCSYALKFNAYQPLYINLD 176 (460)
T ss_dssp SSSCCCEEEEESTTSSHHHHHHHHHHTTHHHHCCCCEEEECC
T ss_pred eCCCCEEEEECCCCCCHHHHHHHHhCcccccCCceeEEEcCC
Confidence 3368899999999999999999998875 4 4 566664
No 323
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=94.10 E-value=0.031 Score=59.52 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=27.0
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh---CCceeeCc
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL---GYTPLSTK 218 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L---g~~fID~D 218 (345)
.+++|+|++|+|||++|+.||+.+ +.+|+..|
T Consensus 589 ~~vLl~Gp~GtGKT~lA~~la~~~~~~~~~~i~i~ 623 (854)
T 1qvr_A 589 GSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRID 623 (854)
T ss_dssp EEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEEC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhcCCCCcEEEEe
Confidence 479999999999999999999998 66665443
No 324
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=94.06 E-value=0.017 Score=49.24 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=21.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
.+..|.|+|.+|+||||+.+.|+.
T Consensus 25 ~~~~v~lvG~~g~GKSTLl~~l~g 48 (210)
T 1pui_A 25 TGIEVAFAGRSNAGKSSALNTLTN 48 (210)
T ss_dssp CSEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCcEEEEECCCCCCHHHHHHHHhC
Confidence 467899999999999999998753
No 325
>3vqt_A RF-3, peptide chain release factor 3; translation, GTPase; HET: GDP; 1.80A {Desulfovibrio vulgaris} PDB: 3vr1_A*
Probab=94.02 E-value=0.079 Score=54.12 Aligned_cols=98 Identities=8% Similarity=0.059 Sum_probs=54.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCC---------------ceeeCcHHHHHHHcCchh-------------hhhhcc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGY---------------TPLSTKELLETFAKQTID-------------SWMLAE 236 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~---------------~fID~D~lIE~~~g~sI~-------------ei~~~~ 236 (345)
+-+||.|||..++||||+...|-..-|. .+.|.++ .|+.-|.+|. .++++.
T Consensus 30 r~RNiaIiaHvdaGKTTLtE~lL~~tG~i~~~G~V~~~~~~~~~~~D~~~-~EreRGITI~s~~~~~~~~~~~iNlIDTP 108 (548)
T 3vqt_A 30 RRRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGSVKARKAARHATSDWMA-MERERGISVTTSVMQFPYRDRVVNLLDTP 108 (548)
T ss_dssp TEEEEEEECCTTSSHHHHHHHHHHHTTCHHHHHHHHHC---------------------CTTTEEEEEETTEEEEEECCC
T ss_pred ccceEEEEeCCCCCHHHHHHHHHHhcCcccccceeecCccccccccCChH-HHHHCCCcEeeceEEEEECCEEEEEEeCC
Confidence 4689999999999999999998644432 5666665 5666676654 357788
Q ss_pred ChHHHHH-HHHHHHHHHhcCCC--EEEEcCCCCCcccCcHHHHHHHh-cC--cEEEEEc
Q 019172 237 GSDSVVN-GECDVLESLSSHVR--AVVATLGGQQGAAARADKWQHLY-AG--FTVWLSQ 289 (345)
Q Consensus 237 Gee~FRe-lE~~vL~~L~~~~~--~VIAtGGG~~~avlr~~~r~~L~-~G--~VV~Ld~ 289 (345)
|-..|-. .|+ .|..-+. .||+.-.|+ .+-++..|+.+. .+ ++++|..
T Consensus 109 GHvDF~~Ev~r----aL~~~DgAvlVvda~~GV--~~qT~~v~~~a~~~~lp~i~fINK 161 (548)
T 3vqt_A 109 GHQDFSEDTYR----VLTAVDSALVVIDAAKGV--EAQTRKLMDVCRMRATPVMTFVNK 161 (548)
T ss_dssp CGGGCSHHHHH----HHHSCSEEEEEEETTTBS--CHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CcHHHHHHHHH----HHHhcCceEEEeecCCCc--ccccHHHHHHHHHhCCceEEEEec
Confidence 8766644 333 2333333 455566675 366777777665 44 4777765
No 326
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=94.02 E-value=0.039 Score=46.15 Aligned_cols=25 Identities=16% Similarity=0.170 Sum_probs=21.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 47 ~~~~i~vvG~~g~GKSsll~~l~~~ 71 (193)
T 2ged_A 47 YQPSIIIAGPQNSGKTSLLTLLTTD 71 (193)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcC
Confidence 4468999999999999999998764
No 327
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=94.01 E-value=0.03 Score=52.75 Aligned_cols=33 Identities=21% Similarity=0.060 Sum_probs=28.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh-----CCceeeCc
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL-----GYTPLSTK 218 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L-----g~~fID~D 218 (345)
+..|.++|.+|+||||++..||..+ ..-++|.|
T Consensus 98 ~~vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D 135 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGAD 135 (297)
T ss_dssp SEEEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5678899999999999999999777 35678888
No 328
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=93.99 E-value=0.027 Score=47.44 Aligned_cols=22 Identities=14% Similarity=0.294 Sum_probs=20.1
Q ss_pred ceEEEEcCCCCChHHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
.+|+|+|.+|+||||+.+.|+.
T Consensus 3 ~kv~ivG~~gvGKStLl~~l~~ 24 (184)
T 2zej_A 3 MKLMIVGNTGSGKTTLLQQLMK 24 (184)
T ss_dssp CEEEEESCTTSSHHHHHHHHTC
T ss_pred eEEEEECCCCCCHHHHHHHHhc
Confidence 4799999999999999999875
No 329
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=93.97 E-value=0.35 Score=40.90 Aligned_cols=88 Identities=11% Similarity=0.128 Sum_probs=51.3
Q ss_pred eEEEE-cCCCCChHHHHHHHHHhhC-----CceeeCcHHHHHHHcCchhhhhhc---------cChHHHHHHHHHHHHHH
Q 019172 188 SIFLV-GDSTEVNEKVALELAVGLG-----YTPLSTKELLETFAKQTIDSWMLA---------EGSDSVVNGECDVLESL 252 (345)
Q Consensus 188 ~IvLI-G~~GSGKSTVAk~LA~~Lg-----~~fID~D~lIE~~~g~sI~ei~~~---------~Gee~FRelE~~vL~~L 252 (345)
.|.++ +-.|+||||++..||..|. .-++|+|.- .+...++.. -+.+.+ .+.++++
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~------~~~~~~~~~~~~~~~~~~~~~~~l----~~~l~~l 72 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ------MSLTNWSKAGKAAFDVFTAASEKD----VYGIRKD 72 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT------CHHHHHHTTSCCSSEEEECCSHHH----HHTHHHH
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC------CCHHHHHhcCCCCCcEEecCcHHH----HHHHHHh
Confidence 35555 5678999999999988764 567888842 112222211 112222 2445566
Q ss_pred hcCCC-EEEEcCCCCCcccCcHHHHHHHh-cCcEEEEEcC
Q 019172 253 SSHVR-AVVATLGGQQGAAARADKWQHLY-AGFTVWLSQT 290 (345)
Q Consensus 253 ~~~~~-~VIAtGGG~~~avlr~~~r~~L~-~G~VV~Ld~s 290 (345)
....+ +||.|++| ........+. .+.+|..-.+
T Consensus 73 ~~~yD~viiD~~~~-----~~~~~~~~l~~ad~viiv~~~ 107 (206)
T 4dzz_A 73 LADYDFAIVDGAGS-----LSVITSAAVMVSDLVIIPVTP 107 (206)
T ss_dssp TTTSSEEEEECCSS-----SSHHHHHHHHHCSEEEEEECS
T ss_pred cCCCCEEEEECCCC-----CCHHHHHHHHHCCEEEEEecC
Confidence 55555 45567765 4666677776 5666665544
No 330
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=93.95 E-value=0.018 Score=55.86 Aligned_cols=26 Identities=15% Similarity=0.003 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.||-.+
T Consensus 30 ~Ge~~~llGpnGsGKSTLLr~iaGl~ 55 (353)
T 1oxx_K 30 NGERFGILGPSGAGKTTFMRIIAGLD 55 (353)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 46779999999999999999999655
No 331
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=93.94 E-value=0.027 Score=47.04 Aligned_cols=26 Identities=12% Similarity=0.238 Sum_probs=22.6
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
++..+|+|+|.+|+||||+...|+..
T Consensus 19 ~~~~ki~vvG~~~~GKSsli~~l~~~ 44 (190)
T 3con_A 19 MTEYKLVVVGAGGVGKSALTIQLIQN 44 (190)
T ss_dssp CEEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred cceeEEEEECcCCCCHHHHHHHHHcC
Confidence 34568999999999999999999865
No 332
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=93.93 E-value=0.031 Score=54.36 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=28.6
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhC--CceeeC
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLG--YTPLST 217 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg--~~fID~ 217 (345)
...+..++|.|++|+||||++..+|...| ..|+++
T Consensus 120 i~~gsviLI~GpPGsGKTtLAlqlA~~~G~~VlyIs~ 156 (331)
T 2vhj_A 120 RYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATV 156 (331)
T ss_dssp EEESEEEEEECSCSSSHHHHHHHHHHHHHTTSCCEEE
T ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHHhCCCCEEEEEe
Confidence 33456788999999999999999998655 458888
No 333
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=93.92 E-value=0.038 Score=44.50 Aligned_cols=23 Identities=13% Similarity=0.352 Sum_probs=20.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 4 ~~i~v~G~~~~GKssli~~l~~~ 26 (170)
T 1ek0_A 4 IKLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 57999999999999999988654
No 334
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=93.89 E-value=0.051 Score=48.22 Aligned_cols=26 Identities=12% Similarity=0.014 Sum_probs=23.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+++-++++|+||+||||.+-.+|.++
T Consensus 7 ~g~i~v~~G~mgsGKTT~ll~~a~r~ 32 (191)
T 1xx6_A 7 HGWVEVIVGPMYSGKSEELIRRIRRA 32 (191)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 46778899999999999999998887
No 335
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=93.89 E-value=0.025 Score=53.09 Aligned_cols=26 Identities=8% Similarity=0.038 Sum_probs=22.7
Q ss_pred CCceEEE--EcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFL--VGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvL--IG~~GSGKSTVAk~LA~~L 210 (345)
.+..++| .|++|+||||+++.+++.+
T Consensus 49 ~~~~~li~i~G~~G~GKT~L~~~~~~~~ 76 (412)
T 1w5s_A 49 SDVNMIYGSIGRVGIGKTTLAKFTVKRV 76 (412)
T ss_dssp CCEEEEEECTTCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcCCCCHHHHHHHHHHHH
Confidence 3557888 8999999999999999877
No 336
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=93.87 E-value=0.036 Score=52.84 Aligned_cols=35 Identities=11% Similarity=0.006 Sum_probs=28.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKEL 220 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~l 220 (345)
+..|.|+|++|+||||++..||..+. .-++|.|-.
T Consensus 105 ~~vI~ivG~~G~GKTT~~~~LA~~l~~~g~kVllid~D~~ 144 (320)
T 1zu4_A 105 LNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTF 144 (320)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 56788999999999999999998763 446788753
No 337
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=93.85 E-value=0.038 Score=53.04 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=29.6
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhh----------CC-ceeeCcH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGL----------GY-TPLSTKE 219 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~L----------g~-~fID~D~ 219 (345)
..+..+.|+|++||||||++..++... |- -|||+.+
T Consensus 129 ~~G~i~~I~G~~GsGKTTL~~~l~~~~~~~~~~Gg~~G~vi~i~~e~ 175 (349)
T 1pzn_A 129 ETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTEN 175 (349)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSS
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhccchhcCCCCCeEEEEeCCC
Confidence 356789999999999999999999876 22 5788754
No 338
>1p6x_A Thymidine kinase; P-loop, LID, transferase; HET: THM; 2.00A {Equid herpesvirus 4} SCOP: c.37.1.1 PDB: 1p72_A* 1p73_A* 1p75_A*
Probab=93.83 E-value=0.02 Score=55.49 Aligned_cols=29 Identities=14% Similarity=-0.036 Sum_probs=26.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYT 213 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~ 213 (345)
+++-|+|-|+-||||||+++.|++.|+..
T Consensus 6 ~~~fI~~EG~dGaGKTT~~~~La~~L~~~ 34 (334)
T 1p6x_A 6 TIVRIYLDGVYGIGKSTTGRVMASAASGG 34 (334)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHSGGGCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhccC
Confidence 46789999999999999999999999753
No 339
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=93.83 E-value=0.038 Score=44.62 Aligned_cols=23 Identities=9% Similarity=0.131 Sum_probs=20.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
..+|+|+|.+|+||||+...|..
T Consensus 3 ~~~i~v~G~~~~GKssli~~l~~ 25 (172)
T 2erx_A 3 DYRVAVFGAGGVGKSSLVLRFVK 25 (172)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHc
Confidence 35799999999999999998875
No 340
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=93.82 E-value=0.043 Score=44.91 Aligned_cols=24 Identities=4% Similarity=0.088 Sum_probs=21.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
+..+|+|+|.+|+||||+...|..
T Consensus 7 ~~~~i~v~G~~~~GKssl~~~l~~ 30 (178)
T 2lkc_A 7 RPPVVTIMGHVDHGKTTLLDAIRH 30 (178)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHhC
Confidence 457899999999999999998864
No 341
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=93.79 E-value=0.036 Score=53.68 Aligned_cols=27 Identities=7% Similarity=0.041 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..|.|+|++||||||+.+.|+..+.
T Consensus 122 ~~g~i~I~GptGSGKTTlL~~l~g~~~ 148 (356)
T 3jvv_A 122 PRGLVLVTGPTGSGKSTTLAAMLDYLN 148 (356)
T ss_dssp SSEEEEEECSTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhccc
Confidence 345799999999999999999987763
No 342
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=93.79 E-value=0.025 Score=58.29 Aligned_cols=29 Identities=10% Similarity=0.163 Sum_probs=26.0
Q ss_pred eEEEEcCCCCChHHHHHHHHHhhCCceee
Q 019172 188 SIFLVGDSTEVNEKVALELAVGLGYTPLS 216 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~Lg~~fID 216 (345)
+|+|+|++|+|||++|+.+|+.++..++.
T Consensus 329 ~vLL~GppGtGKT~LAr~la~~~~r~~~~ 357 (595)
T 3f9v_A 329 HILIIGDPGTAKSQMLQFISRVAPRAVYT 357 (595)
T ss_dssp CEEEEESSCCTHHHHHHSSSTTCSCEECC
T ss_pred ceEEECCCchHHHHHHHHHHHhCCCceec
Confidence 89999999999999999999999865544
No 343
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=93.78 E-value=0.039 Score=47.40 Aligned_cols=24 Identities=13% Similarity=0.209 Sum_probs=20.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
+..+|+|+|.+|+||||+...+..
T Consensus 29 ~~~ki~vvG~~~~GKSsLi~~l~~ 52 (204)
T 4gzl_A 29 QAIKCVVVGDGAVGKTCLLISYTT 52 (204)
T ss_dssp -CEEEEEEESTTSSHHHHHHHHHH
T ss_pred CeEEEEEECcCCCCHHHHHHHHHh
Confidence 456899999999999999988875
No 344
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=93.77 E-value=0.041 Score=50.13 Aligned_cols=26 Identities=15% Similarity=0.045 Sum_probs=22.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
++.-++++|+||+||||.+..++.++
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~ 36 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRL 36 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHH
Confidence 46778889999999999999888776
No 345
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=93.76 E-value=0.039 Score=44.91 Aligned_cols=23 Identities=22% Similarity=0.134 Sum_probs=20.2
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
..+|+|+|.+|+||||+...|..
T Consensus 4 ~~ki~i~G~~~vGKSsl~~~l~~ 26 (175)
T 2nzj_A 4 LYRVVLLGDPGVGKTSLASLFAG 26 (175)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEEEECCCCccHHHHHHHHhc
Confidence 35799999999999999998864
No 346
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=93.75 E-value=0.07 Score=51.68 Aligned_cols=50 Identities=12% Similarity=0.156 Sum_probs=36.9
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhh-----CCceeeC----cHHHHHHHcCchhhh
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGL-----GYTPLST----KELLETFAKQTIDSW 232 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~L-----g~~fID~----D~lIE~~~g~sI~ei 232 (345)
...+..+.|.|.+|+||||++..+|..+ ..-|+|+ |....+..|.....+
T Consensus 60 l~~G~ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~~~~~a~~~g~~~~~l 118 (356)
T 1u94_A 60 LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNL 118 (356)
T ss_dssp EETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGC
T ss_pred ccCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCccHHHHHHcCCChhhe
Confidence 4467889999999999999999988653 4668998 555544556554443
No 347
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=93.74 E-value=0.037 Score=45.44 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=22.0
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+...+|+|+|.+|+||||+...|...
T Consensus 15 ~~~~~ki~v~G~~~~GKSsli~~l~~~ 41 (187)
T 2a9k_A 15 SLALHKVIMVGSGGVGKSALTLQFMYD 41 (187)
T ss_dssp --CEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred CCCceEEEEECCCCCCHHHHHHHHhhC
Confidence 345578999999999999999988754
No 348
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=93.73 E-value=0.04 Score=44.70 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=19.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
.+|+|+|.+|+||||+...|..
T Consensus 3 ~ki~ivG~~~~GKSsli~~l~~ 24 (169)
T 3q85_A 3 FKVMLVGESGVGKSTLAGTFGG 24 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHC
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 4699999999999999998863
No 349
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=93.73 E-value=0.043 Score=44.33 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=21.2
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 6 ~~~i~v~G~~~~GKSsli~~l~~~ 29 (170)
T 1z0j_A 6 ELKVCLLGDTGVGKSSIMWRFVED 29 (170)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHS
T ss_pred ceEEEEECcCCCCHHHHHHHHHcC
Confidence 468999999999999999998765
No 350
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=93.72 E-value=0.042 Score=44.49 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 7 ~~i~v~G~~~~GKssli~~l~~~ 29 (170)
T 1z08_A 7 FKVVLLGEGCVGKTSLVLRYCEN 29 (170)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHC
T ss_pred eEEEEECcCCCCHHHHHHHHHcC
Confidence 57999999999999999998754
No 351
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=93.72 E-value=0.036 Score=56.40 Aligned_cols=26 Identities=23% Similarity=0.197 Sum_probs=23.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 46 ~Ge~~~LvG~NGaGKSTLlk~l~Gl~ 71 (538)
T 1yqt_A 46 EGMVVGIVGPNGTGKSTAVKILAGQL 71 (538)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 57889999999999999999998765
No 352
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=93.69 E-value=0.038 Score=44.69 Aligned_cols=21 Identities=14% Similarity=0.191 Sum_probs=19.0
Q ss_pred ceEEEEcCCCCChHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELA 207 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA 207 (345)
.+|+|+|.+|+||||+...|.
T Consensus 3 ~ki~~vG~~~~GKSsli~~l~ 23 (166)
T 3q72_A 3 YKVLLLGAPGVGKSALARIFG 23 (166)
T ss_dssp CEEEEEESTTSSHHHHHHHHC
T ss_pred EEEEEECCCCCCHHHHHHHHc
Confidence 579999999999999999874
No 353
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=93.67 E-value=0.049 Score=46.72 Aligned_cols=26 Identities=15% Similarity=0.137 Sum_probs=22.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
...+|+|+|++|+||||+...|....
T Consensus 11 ~~~~i~~~G~~g~GKTsl~~~l~~~~ 36 (218)
T 1nrj_B 11 YQPSIIIAGPQNSGKTSLLTLLTTDS 36 (218)
T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 45689999999999999999998764
No 354
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=93.65 E-value=0.044 Score=44.75 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=20.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 8 ~~~i~v~G~~~~GKSsli~~l~~~ 31 (182)
T 1ky3_A 8 ILKVIILGDSGVGKTSLMHRYVND 31 (182)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHS
T ss_pred eEEEEEECCCCCCHHHHHHHHHhC
Confidence 468999999999999999988654
No 355
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=93.62 E-value=0.044 Score=45.27 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=21.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 6 ~~~ki~v~G~~~~GKSsli~~l~~~ 30 (208)
T 3clv_A 6 SSYKTVLLGESSVGKSSIVLRLTKD 30 (208)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHS
T ss_pred cceEEEEECCCCCCHHHHHHHHHhC
Confidence 3468999999999999999998765
No 356
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=93.62 E-value=0.044 Score=45.40 Aligned_cols=26 Identities=8% Similarity=-0.088 Sum_probs=22.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
..+|+|+|.+|+||||+.+.|.....
T Consensus 14 ~~ki~vvG~~~~GKssL~~~l~~~~~ 39 (198)
T 3t1o_A 14 NFKIVYYGPGLSGKTTNLKWIYSKVP 39 (198)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHTSC
T ss_pred ccEEEEECCCCCCHHHHHHHHHhhcc
Confidence 35799999999999999988876543
No 357
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=93.61 E-value=0.049 Score=44.17 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=21.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 6 ~~~~i~v~G~~~~GKssl~~~l~~~ 30 (171)
T 1upt_A 6 REMRILILGLDGAGKTTILYRLQVG 30 (171)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHS
T ss_pred CccEEEEECCCCCCHHHHHHHHhcC
Confidence 3568999999999999999998653
No 358
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=93.60 E-value=0.045 Score=44.65 Aligned_cols=25 Identities=8% Similarity=0.221 Sum_probs=21.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 8 ~~~~i~v~G~~~~GKssli~~l~~~ 32 (181)
T 2fn4_A 8 ETHKLVVVGGGGVGKSALTIQFIQS 32 (181)
T ss_dssp CEEEEEEEECTTSSHHHHHHHHHHS
T ss_pred CceEEEEECCCCCCHHHHHHHHHhC
Confidence 3468999999999999999998765
No 359
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=93.58 E-value=0.036 Score=51.82 Aligned_cols=29 Identities=24% Similarity=0.245 Sum_probs=24.3
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+.+..+.|+|++|+||||+.+.|+..+
T Consensus 165 ~~l~geiv~l~G~sG~GKSTll~~l~g~~ 193 (301)
T 1u0l_A 165 EYLKGKISTMAGLSGVGKSSLLNAINPGL 193 (301)
T ss_dssp HHHSSSEEEEECSTTSSHHHHHHHHSTTC
T ss_pred HHhcCCeEEEECCCCCcHHHHHHHhcccc
Confidence 34567889999999999999999987544
No 360
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=93.57 E-value=0.046 Score=46.39 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=20.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
+..+|+|+|.+|+||||+...|..
T Consensus 22 ~~~ki~~vG~~~vGKSsli~~l~~ 45 (190)
T 1m2o_B 22 KHGKLLFLGLDNAGKTTLLHMLKN 45 (190)
T ss_dssp --CEEEEEESTTSSHHHHHHHHHH
T ss_pred CccEEEEECCCCCCHHHHHHHHhc
Confidence 356899999999999999999986
No 361
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=93.56 E-value=0.047 Score=44.06 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=19.8
Q ss_pred ceEEEEcCCCCChHHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
.+|+|+|.+|+||||+...|..
T Consensus 4 ~~i~v~G~~~~GKssli~~l~~ 25 (170)
T 1g16_A 4 MKILLIGDSGVGKSCLLVRFVE 25 (170)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECcCCCCHHHHHHHHHh
Confidence 5799999999999999998874
No 362
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=93.55 E-value=0.047 Score=44.63 Aligned_cols=24 Identities=13% Similarity=0.126 Sum_probs=20.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 7 ~~~i~v~G~~~~GKSsli~~l~~~ 30 (177)
T 1wms_A 7 LFKVILLGDGGVGKSSLMNRYVTN 30 (177)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHS
T ss_pred eeEEEEECCCCCCHHHHHHHHHcC
Confidence 357999999999999999988653
No 363
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=93.53 E-value=0.049 Score=43.84 Aligned_cols=24 Identities=21% Similarity=0.375 Sum_probs=20.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 6 ~~~i~v~G~~~~GKssli~~l~~~ 29 (170)
T 1r2q_A 6 QFKLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEEECCCCCCHHHHHHHHHcC
Confidence 357999999999999999988753
No 364
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=93.52 E-value=0.5 Score=43.30 Aligned_cols=34 Identities=9% Similarity=0.141 Sum_probs=27.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh---C--CceeeCc
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL---G--YTPLSTK 218 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L---g--~~fID~D 218 (345)
..+.|.++|-.|+||||++-.||..| | .-.||+|
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45678888999999999999888876 3 4568888
No 365
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=93.52 E-value=0.036 Score=56.29 Aligned_cols=27 Identities=11% Similarity=0.119 Sum_probs=24.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+.+|.|+|++||||||+.+.|+..+.
T Consensus 259 ~g~~i~I~GptGSGKTTlL~aL~~~i~ 285 (511)
T 2oap_1 259 HKFSAIVVGETASGKTTTLNAIMMFIP 285 (511)
T ss_dssp TTCCEEEEESTTSSHHHHHHHHGGGSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCC
Confidence 577899999999999999999988774
No 366
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=93.51 E-value=0.048 Score=44.90 Aligned_cols=24 Identities=21% Similarity=0.209 Sum_probs=21.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 11 ~~ki~v~G~~~~GKSsli~~l~~~ 34 (195)
T 3bc1_A 11 LIKFLALGDSGVGKTSVLYQYTDG 34 (195)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEEECCCCCCHHHHHHHHhcC
Confidence 358999999999999999998753
No 367
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=93.46 E-value=0.046 Score=51.21 Aligned_cols=35 Identities=20% Similarity=0.122 Sum_probs=28.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~ 219 (345)
.+..|.|+|.+|+||||++..||..+. .-++|.|-
T Consensus 97 ~~~~i~i~g~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~ 136 (295)
T 1ls1_A 97 DRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADT 136 (295)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEecCCc
Confidence 467889999999999999999997763 44667763
No 368
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=93.43 E-value=0.04 Score=56.18 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh----CCceeeC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL----GYTPLST 217 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L----g~~fID~ 217 (345)
.|..+.|+|++||||||+.+.|+..+ |--.+|+
T Consensus 368 ~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g 404 (582)
T 3b5x_A 368 QGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDG 404 (582)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECC
Confidence 57889999999999999999998775 3344554
No 369
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=93.43 E-value=0.051 Score=44.24 Aligned_cols=25 Identities=8% Similarity=-0.007 Sum_probs=21.6
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+|+|+|.+|+||||+...|...-
T Consensus 15 ~~~i~v~G~~~~GKSsli~~l~~~~ 39 (179)
T 1z0f_A 15 IFKYIIIGDMGVGKSCLLHQFTEKK 39 (179)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHSC
T ss_pred ceEEEEECCCCCCHHHHHHHHHcCC
Confidence 3679999999999999999987643
No 370
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=93.42 E-value=0.03 Score=46.14 Aligned_cols=25 Identities=12% Similarity=0.207 Sum_probs=21.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 6 ~~~ki~~vG~~~vGKTsli~~l~~~ 30 (178)
T 2iwr_A 6 PELRLGVLGDARSGKSSLIHRFLTG 30 (178)
T ss_dssp CEEEEEEECCGGGCHHHHHHHHHHS
T ss_pred CceEEEEECCCCCCHHHHHHHHHhC
Confidence 4568999999999999999998764
No 371
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=93.41 E-value=0.047 Score=52.10 Aligned_cols=26 Identities=12% Similarity=0.006 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.|+..+
T Consensus 54 ~g~~v~i~G~~GaGKSTLl~~l~g~~ 79 (337)
T 2qm8_A 54 RAIRVGITGVPGVGKSTTIDALGSLL 79 (337)
T ss_dssp CSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhh
Confidence 56789999999999999999998764
No 372
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=93.40 E-value=0.051 Score=44.48 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=21.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 6 ~~ki~v~G~~~~GKssl~~~l~~~ 29 (178)
T 2hxs_A 6 QLKIVVLGDGASGKTSLTTCFAQE 29 (178)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHGG
T ss_pred eEEEEEECcCCCCHHHHHHHHHhC
Confidence 467999999999999999998754
No 373
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=93.38 E-value=0.14 Score=52.03 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=27.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh---C--CceeeCcH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL---G--YTPLSTKE 219 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L---g--~~fID~D~ 219 (345)
...|.|+|.+|+||||++..||..| | .-++|.|.
T Consensus 101 ~~vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~ 139 (504)
T 2j37_W 101 QNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADT 139 (504)
T ss_dssp -EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 4579999999999999999999765 4 44677774
No 374
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=93.38 E-value=0.038 Score=56.33 Aligned_cols=27 Identities=22% Similarity=0.228 Sum_probs=24.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+..+.
T Consensus 368 ~G~~~~ivG~sGsGKSTLl~~l~g~~~ 394 (582)
T 3b60_A 368 AGKTVALVGRSGSGKSTIASLITRFYD 394 (582)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhhccC
Confidence 578899999999999999999988764
No 375
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=93.37 E-value=0.059 Score=50.78 Aligned_cols=27 Identities=22% Similarity=0.377 Sum_probs=23.6
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
...|+|.|++|+|||.++..||..+++
T Consensus 104 ~n~~~l~GppgtGKt~~a~ala~~~~l 130 (267)
T 1u0j_A 104 RNTIWLFGPATTGKTNIAEAIAHTVPF 130 (267)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSSC
T ss_pred CcEEEEECCCCCCHHHHHHHHHhhhcc
Confidence 346999999999999999999997654
No 376
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=93.37 E-value=0.037 Score=45.11 Aligned_cols=25 Identities=8% Similarity=0.230 Sum_probs=21.5
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
++..+|+|+|.+|+||||+...|..
T Consensus 12 ~~~~~i~v~G~~~~GKssli~~l~~ 36 (179)
T 2y8e_A 12 LRKFKLVFLGEQSVGKTSLITRFMY 36 (179)
T ss_dssp CEEEEEEEEESTTSSHHHHHHHHHH
T ss_pred CcceEEEEECCCCCCHHHHHHHHHc
Confidence 3446899999999999999998874
No 377
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=93.36 E-value=0.057 Score=43.58 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=19.9
Q ss_pred eEEEEcCCCCChHHHHHHHHHh
Q 019172 188 SIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+|+|+|.+|+||||+...|...
T Consensus 2 ki~~~G~~~~GKssl~~~l~~~ 23 (164)
T 1r8s_A 2 RILMVGLDAAGKTTILYKLKLG 23 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 6899999999999999998754
No 378
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=93.33 E-value=0.047 Score=44.55 Aligned_cols=21 Identities=24% Similarity=0.419 Sum_probs=19.2
Q ss_pred ceEEEEcCCCCChHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELA 207 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA 207 (345)
.+|+|+|.+|+||||+...|.
T Consensus 10 ~~i~v~G~~~~GKssl~~~l~ 30 (181)
T 3tw8_B 10 FKLLIIGDSGVGKSSLLLRFA 30 (181)
T ss_dssp EEEEEECCTTSCHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHh
Confidence 579999999999999999875
No 379
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=93.31 E-value=0.054 Score=44.64 Aligned_cols=23 Identities=13% Similarity=0.239 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 5 ~ki~v~G~~~~GKSsli~~l~~~ 27 (189)
T 4dsu_A 5 YKLVVVGADGVGKSALTIQLIQN 27 (189)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 57999999999999999998754
No 380
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=93.28 E-value=0.044 Score=51.57 Aligned_cols=22 Identities=9% Similarity=-0.025 Sum_probs=19.8
Q ss_pred eEEEEcCCCCChHHHHHHHHHh
Q 019172 188 SIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.++|+|+.||||||+.+.|+..
T Consensus 6 v~~i~G~~GaGKTTll~~l~~~ 27 (318)
T 1nij_A 6 VTLLTGFLGAGKTTLLRHILNE 27 (318)
T ss_dssp EEEEEESSSSSCHHHHHHHHHS
T ss_pred EEEEEecCCCCHHHHHHHHHhh
Confidence 4778999999999999999964
No 381
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=93.28 E-value=0.04 Score=45.30 Aligned_cols=25 Identities=12% Similarity=0.206 Sum_probs=21.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 4 ~~~~i~~~G~~~~GKssl~~~l~~~ 28 (186)
T 1mh1_A 4 QAIKCVVVGDGAVGKTCLLISYTTN 28 (186)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred cEEEEEEECCCCCCHHHHHHHHHcC
Confidence 3467999999999999999988753
No 382
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=93.28 E-value=0.058 Score=45.05 Aligned_cols=25 Identities=20% Similarity=0.029 Sum_probs=21.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 22 ~~~~i~v~G~~~~GKSsli~~l~~~ 46 (195)
T 1svi_A 22 GLPEIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp CCCEEEEEEBTTSSHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 4578999999999999999988643
No 383
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=93.25 E-value=0.045 Score=54.48 Aligned_cols=34 Identities=12% Similarity=0.009 Sum_probs=27.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhhC------CceeeCcH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGLG------YTPLSTKE 219 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~Lg------~~fID~D~ 219 (345)
++.|.++|..|+||||++..||..|. .-++|+|.
T Consensus 100 ~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~ 139 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADV 139 (433)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCC
Confidence 45788999999999999999996663 34788884
No 384
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=93.20 E-value=0.055 Score=52.83 Aligned_cols=29 Identities=17% Similarity=0.058 Sum_probs=24.7
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+.+..+.|+|++|+||||+.+.|+..+.
T Consensus 212 ~~~G~~~~lvG~sG~GKSTLln~L~g~~~ 240 (358)
T 2rcn_A 212 ALTGRISIFAGQSGVGKSSLLNALLGLQN 240 (358)
T ss_dssp HHTTSEEEEECCTTSSHHHHHHHHHCCSS
T ss_pred hcCCCEEEEECCCCccHHHHHHHHhcccc
Confidence 45688999999999999999999985543
No 385
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=93.20 E-value=0.056 Score=44.77 Aligned_cols=24 Identities=17% Similarity=0.075 Sum_probs=21.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 23 ~~~i~v~G~~~~GKSsli~~l~~~ 46 (195)
T 3pqc_A 23 KGEVAFVGRSNVGKSSLLNALFNR 46 (195)
T ss_dssp TCEEEEEEBTTSSHHHHHHHHHTS
T ss_pred CeEEEEECCCCCCHHHHHHHHHcC
Confidence 468999999999999999988654
No 386
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=93.15 E-value=0.054 Score=44.80 Aligned_cols=23 Identities=17% Similarity=0.229 Sum_probs=20.1
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 2 ~ki~v~G~~~~GKSsli~~l~~~ 24 (190)
T 2cxx_A 2 ATIIFAGRSNVGKSTLIYRLTGK 24 (190)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHSC
T ss_pred cEEEEECCCCCCHHHHHHHHhCc
Confidence 36899999999999999988753
No 387
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=93.12 E-value=0.062 Score=51.81 Aligned_cols=31 Identities=13% Similarity=-0.034 Sum_probs=27.2
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
..-+|..+.|+|++|+||||+.+.|+..+.-
T Consensus 67 ~i~~Gq~~gIiG~nGaGKTTLl~~I~g~~~~ 97 (347)
T 2obl_A 67 TCGIGQRIGIFAGSGVGKSTLLGMICNGASA 97 (347)
T ss_dssp CEETTCEEEEEECTTSSHHHHHHHHHHHSCC
T ss_pred eecCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 4447899999999999999999999998763
No 388
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=93.11 E-value=0.056 Score=53.57 Aligned_cols=27 Identities=11% Similarity=0.033 Sum_probs=23.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..|.|+|++||||||+.+.|+..+.
T Consensus 166 ~ggii~I~GpnGSGKTTlL~allg~l~ 192 (418)
T 1p9r_A 166 PHGIILVTGPTGSGKSTTLYAGLQELN 192 (418)
T ss_dssp SSEEEEEECSTTSCHHHHHHHHHHHHC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHhhcC
Confidence 456789999999999999999998875
No 389
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=93.09 E-value=0.07 Score=51.37 Aligned_cols=49 Identities=18% Similarity=0.131 Sum_probs=34.5
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhh-----CCceeeCcHH----HHHHHcCchhh
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGL-----GYTPLSTKEL----LETFAKQTIDS 231 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~L-----g~~fID~D~l----IE~~~g~sI~e 231 (345)
...+..+.|.|++|+||||++..++... ...|+|++.- ..+..|.....
T Consensus 58 l~~G~iv~I~G~pGsGKTtLal~la~~~~~~g~~vlyi~~E~~~~~~~a~~lG~~~~~ 115 (349)
T 2zr9_A 58 LPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDS 115 (349)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGG
T ss_pred ccCCeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEECCCCcCHHHHHHcCCCHHH
Confidence 3457889999999999999999988653 3667887643 33344544443
No 390
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=93.09 E-value=0.061 Score=44.45 Aligned_cols=23 Identities=4% Similarity=0.118 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 11 ~ki~v~G~~~~GKSsli~~l~~~ 33 (186)
T 2bme_A 11 FKFLVIGNAGTGKSCLLHQFIEK 33 (186)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHcC
Confidence 57999999999999999988754
No 391
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=93.05 E-value=0.061 Score=44.94 Aligned_cols=24 Identities=25% Similarity=0.209 Sum_probs=21.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 7 ~~ki~v~G~~~vGKSsli~~l~~~ 30 (184)
T 1m7b_A 7 KCKIVVVGDSQCGKTALLHVFAKD 30 (184)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEEECCCCCCHHHHHHHHhcC
Confidence 467999999999999999998764
No 392
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=93.02 E-value=0.063 Score=53.40 Aligned_cols=31 Identities=13% Similarity=-0.023 Sum_probs=27.3
Q ss_pred hhhcCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 181 ~~~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
...-+|..+.|+|++||||||+.+.||..+.
T Consensus 152 l~i~~Gq~~~IvG~sGsGKSTLl~~Iag~~~ 182 (438)
T 2dpy_A 152 LTVGRGQRMGLFAGSGVGKSVLLGMMARYTR 182 (438)
T ss_dssp SCCBTTCEEEEEECTTSSHHHHHHHHHHHSC
T ss_pred EEecCCCEEEEECCCCCCHHHHHHHHhcccC
Confidence 3455788999999999999999999999875
No 393
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=93.02 E-value=0.056 Score=47.80 Aligned_cols=24 Identities=17% Similarity=0.140 Sum_probs=20.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
...+|+|+|.+|+||||+...|..
T Consensus 28 ~~~~i~lvG~~g~GKStlin~l~g 51 (239)
T 3lxx_A 28 SQLRIVLVGKTGAGKSATGNSILG 51 (239)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHT
T ss_pred CceEEEEECCCCCCHHHHHHHHcC
Confidence 346899999999999999998764
No 394
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=93.01 E-value=0.065 Score=43.92 Aligned_cols=24 Identities=25% Similarity=0.331 Sum_probs=21.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 10 ~~~i~v~G~~~~GKssli~~l~~~ 33 (180)
T 2g6b_A 10 AFKVMLVGDSGVGKTCLLVRFKDG 33 (180)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred ceEEEEECcCCCCHHHHHHHHHhC
Confidence 357999999999999999988654
No 395
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=92.97 E-value=0.065 Score=44.26 Aligned_cols=26 Identities=15% Similarity=0.240 Sum_probs=22.2
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
....+|+|+|.+|+||||+...|...
T Consensus 16 ~~~~ki~v~G~~~~GKSsl~~~l~~~ 41 (183)
T 3kkq_A 16 LPTYKLVVVGDGGVGKSALTIQFFQK 41 (183)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhC
Confidence 34568999999999999999998754
No 396
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=92.95 E-value=0.065 Score=44.90 Aligned_cols=23 Identities=13% Similarity=0.216 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 26 ~ki~v~G~~~~GKSsLi~~l~~~ 48 (193)
T 2oil_A 26 FKVVLIGESGVGKTNLLSRFTRN 48 (193)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHS
T ss_pred eEEEEECcCCCCHHHHHHHHhcC
Confidence 57999999999999999988764
No 397
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=92.94 E-value=0.066 Score=43.90 Aligned_cols=24 Identities=17% Similarity=0.329 Sum_probs=20.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 12 ~~ki~v~G~~~~GKSsli~~l~~~ 35 (181)
T 2efe_B 12 NAKLVLLGDVGAGKSSLVLRFVKD 35 (181)
T ss_dssp EEEEEEECCTTSCHHHHHHHHHHC
T ss_pred ceEEEEECcCCCCHHHHHHHHHcC
Confidence 468999999999999999988753
No 398
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=92.93 E-value=0.044 Score=45.24 Aligned_cols=23 Identities=9% Similarity=0.215 Sum_probs=20.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
..+|+|+|.+|+||||+...|..
T Consensus 6 ~~ki~~~G~~~~GKSsli~~l~~ 28 (181)
T 3t5g_A 6 SRKIAILGYRSVGKSSLTIQFVE 28 (181)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEEECcCCCCHHHHHHHHHc
Confidence 46799999999999999998874
No 399
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=92.89 E-value=0.058 Score=45.87 Aligned_cols=25 Identities=12% Similarity=0.214 Sum_probs=21.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 23 ~~~ki~vvG~~~~GKSsli~~l~~~ 47 (201)
T 3oes_A 23 RYRKVVILGYRCVGKTSLAHQFVEG 47 (201)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHS
T ss_pred CcEEEEEECCCCcCHHHHHHHHHhC
Confidence 4568999999999999999998764
No 400
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=92.89 E-value=0.072 Score=44.51 Aligned_cols=24 Identities=8% Similarity=0.170 Sum_probs=21.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
...+|+|+|.+|+||||+...|..
T Consensus 7 ~~~ki~vvG~~~~GKSsli~~l~~ 30 (199)
T 2gf0_A 7 NDYRVVVFGAGGVGKSSLVLRFVK 30 (199)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHH
T ss_pred CeeEEEEECCCCCcHHHHHHHHHc
Confidence 456899999999999999999875
No 401
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=92.88 E-value=0.071 Score=45.01 Aligned_cols=25 Identities=4% Similarity=0.106 Sum_probs=22.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 27 ~~~ki~v~G~~~vGKSsli~~l~~~ 51 (196)
T 2atv_A 27 AEVKLAIFGRAGVGKSALVVRFLTK 51 (196)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHS
T ss_pred CceEEEEECCCCCCHHHHHHHHHhC
Confidence 4578999999999999999998764
No 402
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=92.88 E-value=0.063 Score=51.67 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=30.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCceeeCcHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELL 221 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~fID~D~lI 221 (345)
.++.|+|+|.+|+||||+|-.|.+ .|+.++.=|...
T Consensus 146 ~g~gvli~G~sG~GKStlal~l~~-~G~~lv~DD~v~ 181 (312)
T 1knx_A 146 FGVGVLLTGRSGIGKSECALDLIN-KNHLFVGDDAIE 181 (312)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHT-TTCEEEEEEEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHH-cCCEEEeCCEEE
Confidence 578899999999999999999976 589888777653
No 403
>1osn_A Thymidine kinase, VZV-TK; chickenpox, BVDU-MP, transferase; HET: BVP ADP; 3.20A {Human herpesvirus 3} SCOP: c.37.1.1
Probab=92.88 E-value=0.034 Score=54.12 Aligned_cols=33 Identities=15% Similarity=-0.170 Sum_probs=28.1
Q ss_pred hhhcCCceEEEEcCCCCChHHHH-HHHHHhhCCc
Q 019172 181 MQLLKGTSIFLVGDSTEVNEKVA-LELAVGLGYT 213 (345)
Q Consensus 181 ~~~l~~~~IvLIG~~GSGKSTVA-k~LA~~Lg~~ 213 (345)
+...+++-|+|-|.-|+||||+. +.|++.|+-.
T Consensus 7 ~~~~~~~~I~iEG~~GaGKTT~~~~~L~~~l~~~ 40 (341)
T 1osn_A 7 DVKMGVLRIYLDGAYGIGKTTAAEEFLHHFAITP 40 (341)
T ss_dssp -CCEEEEEEEEEESSSSCTTHHHHHHHHTTTTSG
T ss_pred cccCCceEEEEeCCCCCCHHHHHHHHHHHHHhhC
Confidence 34456788999999999999999 9999998854
No 404
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=92.87 E-value=0.046 Score=45.05 Aligned_cols=23 Identities=17% Similarity=0.250 Sum_probs=20.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELA 207 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA 207 (345)
+..+|+|+|.+|+||||+...|.
T Consensus 17 ~~~~i~v~G~~~~GKssli~~l~ 39 (183)
T 1moz_A 17 KELRILILGLDGAGKTTILYRLQ 39 (183)
T ss_dssp SCEEEEEEEETTSSHHHHHHHTC
T ss_pred CccEEEEECCCCCCHHHHHHHHh
Confidence 45689999999999999998775
No 405
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=92.87 E-value=0.05 Score=54.39 Aligned_cols=35 Identities=23% Similarity=0.111 Sum_probs=28.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh---C--CceeeCcHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL---G--YTPLSTKEL 220 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L---g--~~fID~D~l 220 (345)
+..|+++|++|+||||++..||..| | .-++++|.+
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 5678999999999999999999766 3 336788843
No 406
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=92.76 E-value=0.066 Score=48.64 Aligned_cols=25 Identities=16% Similarity=0.052 Sum_probs=21.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|.|+|.+|+||||+...|...
T Consensus 2 ~~~~i~lvG~~g~GKTTL~n~l~g~ 26 (271)
T 3k53_A 2 VLKTVALVGNPNVGKTTIFNALTGL 26 (271)
T ss_dssp CCEEEEEEECSSSSHHHHHHHHHTT
T ss_pred ceeEEEEECCCCCCHHHHHHHHhCC
Confidence 3468999999999999999998643
No 407
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=92.75 E-value=0.044 Score=56.00 Aligned_cols=27 Identities=26% Similarity=0.132 Sum_probs=24.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+..+.
T Consensus 369 ~G~~~~ivG~sGsGKSTLl~~l~g~~~ 395 (595)
T 2yl4_A 369 SGSVTALVGPSGSGKSTVLSLLLRLYD 395 (595)
T ss_dssp TTCEEEEECCTTSSSTHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCcC
Confidence 478899999999999999999987764
No 408
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=92.74 E-value=0.072 Score=44.73 Aligned_cols=25 Identities=12% Similarity=0.209 Sum_probs=21.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 13 ~~~ki~v~G~~~~GKSsli~~l~~~ 37 (206)
T 2bov_A 13 ALHKVIMVGSGGVGKSALTLQFMYD 37 (206)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred ceEEEEEECCCCCCHHHHHHHHHhC
Confidence 4568999999999999999988754
No 409
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=92.73 E-value=0.063 Score=45.43 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=22.3
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+..+|+|+|.+|+||||+...+...
T Consensus 17 ~~~~~ki~ivG~~~vGKSsL~~~~~~~ 43 (184)
T 3ihw_A 17 QGPELKVGIVGNLSSGKSALVHRYLTG 43 (184)
T ss_dssp CCCEEEEEEECCTTSCHHHHHHHHHHS
T ss_pred CCCeeEEEEECCCCCCHHHHHHHHhcC
Confidence 345568999999999999999877654
No 410
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=92.68 E-value=0.076 Score=45.35 Aligned_cols=25 Identities=16% Similarity=0.266 Sum_probs=21.0
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 6 ~~~ki~vvG~~~~GKTsli~~l~~~ 30 (214)
T 2fh5_B 6 SQRAVLFVGLCDSGKTLLFVRLLTG 30 (214)
T ss_dssp --CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 4578999999999999999998764
No 411
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=92.66 E-value=0.066 Score=54.49 Aligned_cols=26 Identities=27% Similarity=0.096 Sum_probs=23.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 311 ~Ge~~~i~G~NGsGKSTLlk~l~Gl~ 336 (538)
T 1yqt_A 311 KGEVIGIVGPNGIGKTTFVKMLAGVE 336 (538)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 57889999999999999999998765
No 412
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=92.65 E-value=0.075 Score=44.80 Aligned_cols=24 Identities=13% Similarity=0.109 Sum_probs=21.2
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 8 ~~ki~v~G~~~~GKSsli~~l~~~ 31 (207)
T 1vg8_A 8 LLKVIILGDSGVGKTSLMNQYVNK 31 (207)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHS
T ss_pred ceEEEEECcCCCCHHHHHHHHHcC
Confidence 468999999999999999998754
No 413
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=92.63 E-value=0.077 Score=44.20 Aligned_cols=23 Identities=26% Similarity=0.317 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 17 ~ki~v~G~~~~GKSsli~~l~~~ 39 (196)
T 3tkl_A 17 FKLLLIGDSGVGKSCLLLRFADD 39 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECcCCCCHHHHHHHHHcC
Confidence 57999999999999999998753
No 414
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=92.61 E-value=0.046 Score=56.03 Aligned_cols=27 Identities=19% Similarity=0.149 Sum_probs=24.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+..+.
T Consensus 380 ~G~~~~ivG~sGsGKSTll~~l~g~~~ 406 (598)
T 3qf4_B 380 PGQKVALVGPTGSGKTTIVNLLMRFYD 406 (598)
T ss_dssp TTCEEEEECCTTSSTTHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCcC
Confidence 478899999999999999999987664
No 415
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=92.61 E-value=0.071 Score=44.77 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=21.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 15 ~~~ki~ivG~~~vGKSsL~~~l~~~ 39 (181)
T 1fzq_A 15 QEVRILLLGLDNAGKTTLLKQLASE 39 (181)
T ss_dssp SCEEEEEEESTTSSHHHHHHHHCCS
T ss_pred CceEEEEECCCCCCHHHHHHHHhcC
Confidence 3568999999999999999988654
No 416
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=92.56 E-value=0.075 Score=44.11 Aligned_cols=25 Identities=4% Similarity=0.129 Sum_probs=21.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 17 ~~~~i~v~G~~~~GKssl~~~l~~~ 41 (186)
T 1ksh_A 17 RELRLLMLGLDNAGKTTILKKFNGE 41 (186)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHTTC
T ss_pred CeeEEEEECCCCCCHHHHHHHHhcC
Confidence 4578999999999999999988753
No 417
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=92.50 E-value=0.056 Score=55.16 Aligned_cols=26 Identities=19% Similarity=0.106 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 24 ~Gei~gLiGpNGaGKSTLlkiL~Gl~ 49 (538)
T 3ozx_A 24 NNTILGVLGKNGVGKTTVLKILAGEI 49 (538)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCC
Confidence 46778999999999999999998765
No 418
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=92.48 E-value=0.077 Score=50.41 Aligned_cols=26 Identities=8% Similarity=0.017 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
++..|.|+|.+|+||||+...|+..+
T Consensus 55 ~~~~i~i~G~~g~GKSTl~~~l~~~~ 80 (341)
T 2p67_A 55 NTLRLGVTGTPGAGKSTFLEAFGMLL 80 (341)
T ss_dssp CSEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 46789999999999999999998765
No 419
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=92.48 E-value=0.085 Score=44.33 Aligned_cols=25 Identities=12% Similarity=0.173 Sum_probs=21.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+|+|+|.+|+||||+...|...-
T Consensus 23 ~~ki~v~G~~~~GKSsli~~l~~~~ 47 (191)
T 3dz8_A 23 MFKLLIIGNSSVGKTSFLFRYADDT 47 (191)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eeEEEEECCCCcCHHHHHHHHhcCC
Confidence 4689999999999999999988654
No 420
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=92.47 E-value=0.06 Score=55.77 Aligned_cols=26 Identities=23% Similarity=0.184 Sum_probs=23.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 116 ~Ge~~~LiG~NGsGKSTLlkiL~Gll 141 (607)
T 3bk7_A 116 DGMVVGIVGPNGTGKTTAVKILAGQL 141 (607)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCChHHHHHHHHhCCC
Confidence 57889999999999999999998655
No 421
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=92.47 E-value=0.069 Score=45.70 Aligned_cols=25 Identities=12% Similarity=0.058 Sum_probs=21.3
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
.+..+|+|+|.+|+||||+...|..
T Consensus 23 ~~~~ki~lvG~~~vGKSsLi~~l~~ 47 (198)
T 1f6b_A 23 KKTGKLVFLGLDNAGKTTLLHMLKD 47 (198)
T ss_dssp TCCEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhc
Confidence 3456899999999999999998853
No 422
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=92.45 E-value=0.073 Score=53.43 Aligned_cols=36 Identities=14% Similarity=0.078 Sum_probs=27.2
Q ss_pred cCCceEEEEcCCCCChHHHHHHH--HHhh----CCceeeCcH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALEL--AVGL----GYTPLSTKE 219 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~L--A~~L----g~~fID~D~ 219 (345)
..+..+.|+|++||||||+++.+ +-.+ |--+++..+
T Consensus 37 ~~Ge~~~l~G~nGsGKSTL~~~~ll~Gl~~~~~g~i~v~g~~ 78 (525)
T 1tf7_A 37 PIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEE 78 (525)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSS
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHHHHHHhCCCCEEEEEEeC
Confidence 36788999999999999999994 3332 455676654
No 423
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=92.45 E-value=0.084 Score=44.18 Aligned_cols=23 Identities=17% Similarity=0.274 Sum_probs=20.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 23 ~ki~vvG~~~~GKSsli~~l~~~ 45 (189)
T 2gf9_A 23 FKLLLIGNSSVGKTSFLFRYADD 45 (189)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHcC
Confidence 57999999999999999988754
No 424
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=92.42 E-value=0.085 Score=43.76 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=21.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 14 ~~~~i~v~G~~~~GKssli~~l~~~ 38 (195)
T 1x3s_A 14 TTLKILIIGESGVGKSSLLLRFTDD 38 (195)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred CceEEEEECCCCCCHHHHHHHHHcC
Confidence 4468999999999999999998754
No 425
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=92.40 E-value=0.063 Score=54.79 Aligned_cols=26 Identities=19% Similarity=0.133 Sum_probs=23.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.+..+.|+|++||||||+.+.|+-.+
T Consensus 293 ~Gei~~i~G~nGsGKSTLl~~l~Gl~ 318 (538)
T 3ozx_A 293 EGEIIGILGPNGIGKTTFARILVGEI 318 (538)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 57889999999999999999998755
No 426
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=92.40 E-value=0.073 Score=55.24 Aligned_cols=26 Identities=23% Similarity=0.079 Sum_probs=23.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 102 ~Gei~~LvGpNGaGKSTLLkiL~Gll 127 (608)
T 3j16_B 102 PGQVLGLVGTNGIGKSTALKILAGKQ 127 (608)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCC
Confidence 57889999999999999999999765
No 427
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=92.38 E-value=0.072 Score=51.71 Aligned_cols=28 Identities=14% Similarity=0.211 Sum_probs=23.1
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+..+|+|+|.+||||||+++.+.-..+
T Consensus 31 ~~~~killlG~~~SGKST~~kq~~i~~~ 58 (362)
T 1zcb_A 31 ARLVKILLLGAGESGKSTFLKQMRIIHG 58 (362)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHHHHS
T ss_pred cCccEEEEECCCCCcHHHHHHHHHHHhC
Confidence 3457899999999999999999864444
No 428
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=92.38 E-value=0.084 Score=44.51 Aligned_cols=24 Identities=13% Similarity=0.231 Sum_probs=21.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 23 ~~ki~vvG~~~~GKSsli~~l~~~ 46 (192)
T 2fg5_A 23 ELKVCLLGDTGVGKSSIVCRFVQD 46 (192)
T ss_dssp EEEEEEEECTTSSHHHHHHHHHHC
T ss_pred ceEEEEECcCCCCHHHHHHHHhcC
Confidence 468999999999999999998754
No 429
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=92.37 E-value=0.086 Score=44.72 Aligned_cols=25 Identities=24% Similarity=0.326 Sum_probs=21.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 27 ~~~ki~v~G~~~~GKSsli~~l~~~ 51 (199)
T 2p5s_A 27 KAYKIVLAGDAAVGKSSFLMRLCKN 51 (199)
T ss_dssp -CEEEEEESSTTSSHHHHHHHHHHC
T ss_pred CCeEEEEECcCCCCHHHHHHHHHhC
Confidence 4578999999999999999998754
No 430
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=92.34 E-value=0.031 Score=53.30 Aligned_cols=28 Identities=7% Similarity=0.099 Sum_probs=23.5
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+.+..+.|+|++|+||||+.+.|+..
T Consensus 169 ~~~~G~~~~lvG~sG~GKSTLln~L~g~ 196 (307)
T 1t9h_A 169 PHFQDKTTVFAGQSGVGKSSLLNAISPE 196 (307)
T ss_dssp GGGTTSEEEEEESHHHHHHHHHHHHCC-
T ss_pred hhcCCCEEEEECCCCCCHHHHHHHhccc
Confidence 4457889999999999999999998643
No 431
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=92.32 E-value=0.088 Score=44.05 Aligned_cols=25 Identities=20% Similarity=0.331 Sum_probs=21.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 19 ~~~ki~v~G~~~~GKSsli~~l~~~ 43 (189)
T 1z06_A 19 RIFKIIVIGDSNVGKTCLTYRFCAG 43 (189)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHHS
T ss_pred ceEEEEEECCCCCCHHHHHHHHHcC
Confidence 4468999999999999999988653
No 432
>1of1_A Thymidine kinase; transferase, antiviral drug, enzyme- prodrug gene, DNA synthesis, ATP-binding; HET: SCT; 1.95A {Herpes simplex virus} SCOP: c.37.1.1
Probab=92.31 E-value=0.041 Score=54.29 Aligned_cols=28 Identities=7% Similarity=-0.091 Sum_probs=22.7
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.+++-|+|-|.-||||||+++.|++.|.
T Consensus 47 ~~~~fIt~EG~dGsGKTT~~~~Lae~L~ 74 (376)
T 1of1_A 47 PTLLRVYIDGPHGMGKTTTTQLLVALGS 74 (376)
T ss_dssp CEEEEEEECSSTTSSHHHHHHHHHC---
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHhh
Confidence 3556799999999999999999999886
No 433
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=92.30 E-value=0.084 Score=44.59 Aligned_cols=23 Identities=17% Similarity=0.274 Sum_probs=20.3
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 9 ~ki~v~G~~~~GKSsli~~l~~~ 31 (203)
T 1zbd_A 9 FKILIIGNSSVGKTSFLFRYADD 31 (203)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTC
T ss_pred eEEEEECCCCCCHHHHHHHHhcC
Confidence 57999999999999999988653
No 434
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=92.28 E-value=0.089 Score=43.95 Aligned_cols=24 Identities=8% Similarity=0.282 Sum_probs=21.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
+..+|+|+|.+|+||||+...|..
T Consensus 15 ~~~~i~v~G~~~~GKssl~~~l~~ 38 (187)
T 1zj6_A 15 QEHKVIIVGLDNAGKTTILYQFSM 38 (187)
T ss_dssp SCEEEEEEESTTSSHHHHHHHHHT
T ss_pred CccEEEEECCCCCCHHHHHHHHhc
Confidence 457899999999999999999874
No 435
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=92.25 E-value=0.078 Score=54.92 Aligned_cols=26 Identities=27% Similarity=0.096 Sum_probs=23.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
.|..+.|+|++||||||+.+.|+-.+
T Consensus 381 ~Gei~~i~G~NGsGKSTLlk~l~Gl~ 406 (607)
T 3bk7_A 381 KGEVIGIVGPNGIGKTTFVKMLAGVE 406 (607)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 57889999999999999999999754
No 436
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=92.25 E-value=0.091 Score=44.15 Aligned_cols=24 Identities=13% Similarity=0.131 Sum_probs=21.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 21 ~~ki~v~G~~~~GKSsli~~l~~~ 44 (191)
T 2a5j_A 21 LFKYIIIGDTGVGKSCLLLQFTDK 44 (191)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHS
T ss_pred ceEEEEECcCCCCHHHHHHHHhcC
Confidence 357999999999999999988753
No 437
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=92.22 E-value=0.091 Score=44.31 Aligned_cols=25 Identities=4% Similarity=0.142 Sum_probs=21.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 20 ~~~ki~vvG~~~vGKTsLi~~l~~~ 44 (187)
T 3c5c_A 20 LEVNLAILGRRGAGKSALTVKFLTK 44 (187)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHHS
T ss_pred ceEEEEEECCCCCcHHHHHHHHHhC
Confidence 4568999999999999999888754
No 438
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=92.21 E-value=0.085 Score=47.08 Aligned_cols=25 Identities=16% Similarity=0.151 Sum_probs=21.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 21 ~~~~I~lvG~~g~GKStl~n~l~~~ 45 (260)
T 2xtp_A 21 SELRIILVGKTGTGKSAAGNSILRK 45 (260)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHTS
T ss_pred CceEEEEECCCCCCHHHHHHHHhCC
Confidence 4578999999999999999988643
No 439
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=92.20 E-value=0.091 Score=44.58 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=20.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 9 ~ki~v~G~~~~GKSsli~~l~~~ 31 (206)
T 2bcg_Y 9 FKLLLIGNSGVGKSCLLLRFSDD 31 (206)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHhcC
Confidence 57999999999999999998753
No 440
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=92.19 E-value=0.093 Score=44.08 Aligned_cols=25 Identities=28% Similarity=0.393 Sum_probs=21.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
+..+|+|+|.+|+||||+...|...
T Consensus 22 ~~~ki~~vG~~~~GKSsl~~~l~~~ 46 (194)
T 3reg_A 22 KALKIVVVGDGAVGKTCLLLAFSKG 46 (194)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHHS
T ss_pred eeeEEEEECcCCCCHHHHHHHHhcC
Confidence 3468999999999999999998764
No 441
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=92.19 E-value=0.096 Score=49.24 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=30.0
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhh-----------CCceeeCcH
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGL-----------GYTPLSTKE 219 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~L-----------g~~fID~D~ 219 (345)
...+..+.|.|++|+||||++..+|... +.-|+|++.
T Consensus 104 l~~G~i~~i~G~~GsGKT~la~~la~~~~~~~~~gg~~~~vlyi~~e~ 151 (324)
T 2z43_A 104 IETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEG 151 (324)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHHTTSCGGGTCCSCEEEEEESSS
T ss_pred CCCCcEEEEECCCCCCHhHHHHHHHHHHhcccccCCCCCeEEEEECCC
Confidence 3457889999999999999999999764 245888775
No 442
>1e2k_A Thymidine kinase; transferase, antiviral drug, enzyme-prodrug gene therapy, sugar ring pucker; HET: TMC; 1.7A {Herpes simplex virus} SCOP: c.37.1.1 PDB: 1e2i_A* 1e2h_A* 1e2m_A* 1e2n_A* 1e2p_A* 1ki2_A* 1ki3_A* 1ki4_A* 1ki6_B* 1ki7_A* 1ki8_A* 3rdp_A* 2ki5_A* 1kim_A* 1qhi_A* 1p7c_A* 1vtk_A* 2vtk_A* 3vtk_A* 3f0t_A* ...
Probab=92.18 E-value=0.037 Score=53.54 Aligned_cols=27 Identities=7% Similarity=-0.066 Sum_probs=21.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
+++-|+|-|.-||||||+++.|++.|.
T Consensus 3 ~~~fI~~EG~dGsGKTT~~~~La~~L~ 29 (331)
T 1e2k_A 3 TLLRVYIDGPHGMGKTTTTQLLVALGS 29 (331)
T ss_dssp EEEEEEECSCTTSSHHHHHHHHTC---
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 356799999999999999999999886
No 443
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=92.16 E-value=0.095 Score=44.03 Aligned_cols=24 Identities=21% Similarity=0.162 Sum_probs=21.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 22 ~~ki~v~G~~~~GKSsli~~l~~~ 45 (188)
T 1zd9_A 22 EMELTLVGLQYSGKTTFVNVIASG 45 (188)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred ccEEEEECCCCCCHHHHHHHHHcC
Confidence 458999999999999999998753
No 444
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=92.16 E-value=0.041 Score=56.10 Aligned_cols=27 Identities=19% Similarity=0.129 Sum_probs=23.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+..+.
T Consensus 366 ~G~~~~ivG~sGsGKSTll~~l~g~~~ 392 (578)
T 4a82_A 366 KGETVAFVGMSGGGKSTLINLIPRFYD 392 (578)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTTSSC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCCC
Confidence 478899999999999999999987664
No 445
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=92.05 E-value=0.075 Score=49.76 Aligned_cols=22 Identities=18% Similarity=0.244 Sum_probs=19.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
-+|.|+|++|+||||+.+.|+.
T Consensus 19 ~~I~lvG~nG~GKSTLl~~L~g 40 (301)
T 2qnr_A 19 FTLMVVGESGLGKSTLINSLFL 40 (301)
T ss_dssp EEEEEEEETTSSHHHHHHHHHC
T ss_pred EEEEEECCCCCCHHHHHHHHhC
Confidence 4689999999999999999764
No 446
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=92.03 E-value=0.095 Score=50.16 Aligned_cols=25 Identities=12% Similarity=-0.036 Sum_probs=22.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+..|.|+|++||||||+-..|...+
T Consensus 74 ~~~v~lvG~pgaGKSTLln~L~~~~ 98 (349)
T 2www_A 74 AFRVGLSGPPGAGKSTFIEYFGKML 98 (349)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHh
Confidence 5679999999999999999998764
No 447
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=92.03 E-value=0.14 Score=47.27 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=27.5
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh---CCc--eeeCcH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL---GYT--PLSTKE 219 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L---g~~--fID~D~ 219 (345)
..+|++.|.+|+||||++-.+|..+ |+. ++|+|.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4579999999999999988887665 555 568885
No 448
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=92.02 E-value=0.085 Score=43.93 Aligned_cols=27 Identities=7% Similarity=0.176 Sum_probs=21.5
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+..+|+|+|.+|+||||+...|...
T Consensus 18 ~~~~~~i~v~G~~~~GKSsli~~l~~~ 44 (181)
T 2h17_A 18 GSQEHKVIIVGLDNAGKTTILYQFSMN 44 (181)
T ss_dssp ---CEEEEEEEETTSSHHHHHHHHHTT
T ss_pred CCceeEEEEECCCCCCHHHHHHHHhcC
Confidence 335678999999999999999988753
No 449
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=92.01 E-value=0.1 Score=49.98 Aligned_cols=26 Identities=8% Similarity=-0.032 Sum_probs=22.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
...+++|+|++|+||||+.+.++..+
T Consensus 34 ~~~~~~i~G~~G~GKs~~~~~~~~~~ 59 (392)
T 4ag6_A 34 TNSNWTILAKPGAGKSFTAKMLLLRE 59 (392)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHH
T ss_pred ccCceEEEcCCCCCHHHHHHHHHHHH
Confidence 56789999999999999999887653
No 450
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=91.98 E-value=0.097 Score=44.11 Aligned_cols=24 Identities=21% Similarity=0.393 Sum_probs=20.8
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
...+|+|+|.+|+||||+...|..
T Consensus 19 ~~~ki~~~G~~~~GKssl~~~l~~ 42 (201)
T 2q3h_A 19 RGVKCVLVGDGAVGKTSLVVSYTT 42 (201)
T ss_dssp -CEEEEEECSTTSSHHHHHHHHHC
T ss_pred cceEEEEECCCCCCHHHHHHHHHh
Confidence 467899999999999999998864
No 451
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=91.92 E-value=0.052 Score=55.56 Aligned_cols=27 Identities=7% Similarity=0.155 Sum_probs=24.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
.|..+.|+|++||||||+.+.|+..+.
T Consensus 368 ~Ge~~~ivG~sGsGKSTll~~l~g~~~ 394 (587)
T 3qf4_A 368 PGSLVAVLGETGSGKSTLMNLIPRLID 394 (587)
T ss_dssp TTCEEEEECSSSSSHHHHHHTTTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCcc
Confidence 478899999999999999999987664
No 452
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=91.90 E-value=0.096 Score=44.47 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=20.4
Q ss_pred CCceEEEEcCCCCChHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELA 207 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA 207 (345)
+..+|+|+|.+|+||||+...|.
T Consensus 28 ~~~ki~v~G~~~vGKSsLi~~l~ 50 (192)
T 2b6h_A 28 KQMRILMVGLDAAGKTTILYKLK 50 (192)
T ss_dssp SCEEEEEEESTTSSHHHHHHHHC
T ss_pred CccEEEEECCCCCCHHHHHHHHH
Confidence 35689999999999999999885
No 453
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=91.88 E-value=0.1 Score=45.12 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=21.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 26 ~~ki~lvG~~~vGKSsLi~~l~~~ 49 (201)
T 2ew1_A 26 LFKIVLIGNAGVGKTCLVRRFTQG 49 (201)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred ceEEEEECcCCCCHHHHHHHHHhC
Confidence 358999999999999999988754
No 454
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=91.88 E-value=0.084 Score=52.78 Aligned_cols=26 Identities=19% Similarity=0.155 Sum_probs=21.8
Q ss_pred cCCce--EEEEcCCCCChHHHHHHHHHh
Q 019172 184 LKGTS--IFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 184 l~~~~--IvLIG~~GSGKSTVAk~LA~~ 209 (345)
-.|.. |.|+|++||||||+.+.|+..
T Consensus 38 ~~Gei~~vaLvG~nGaGKSTLln~L~G~ 65 (427)
T 2qag_B 38 SQGFCFNILCVGETGLGKSTLMDTLFNT 65 (427)
T ss_dssp C-CCEEEEEEECSTTSSSHHHHHHHHTS
T ss_pred cCCCeeEEEEECCCCCCHHHHHHHHhCc
Confidence 35666 999999999999999999755
No 455
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=91.87 E-value=0.1 Score=45.17 Aligned_cols=24 Identities=25% Similarity=0.209 Sum_probs=21.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 28 ~~ki~vvG~~~vGKSsLi~~l~~~ 51 (205)
T 1gwn_A 28 KCKIVVVGDSQCGKTALLHVFAKD 51 (205)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred eeEEEEECCCCCCHHHHHHHHhcC
Confidence 468999999999999999999764
No 456
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=91.87 E-value=0.089 Score=44.61 Aligned_cols=24 Identities=13% Similarity=0.101 Sum_probs=20.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
+..+|+|+|.+|+||||+.+.+..
T Consensus 19 ~~~ki~~vG~~~vGKTsLi~~l~~ 42 (196)
T 3llu_A 19 SKPRILLMGLRRSGKSSIQKVVFH 42 (196)
T ss_dssp -CCEEEEEESTTSSHHHHHHHHHS
T ss_pred cceEEEEECCCCCCHHHHHHHHHh
Confidence 457899999999999999887655
No 457
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=91.86 E-value=0.11 Score=46.14 Aligned_cols=24 Identities=4% Similarity=0.084 Sum_probs=19.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+-++++|.+|+|||+++..++..
T Consensus 5 ~mi~l~tG~pGsGKT~~a~~~~~~ 28 (199)
T 2r2a_A 5 AEICLITGTPGSGKTLKMVSMMAN 28 (199)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHH
T ss_pred eeEEEEEeCCCCCHHHHHHHHHHH
Confidence 457889999999999999886544
No 458
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=91.83 E-value=0.096 Score=44.26 Aligned_cols=23 Identities=4% Similarity=0.112 Sum_probs=20.0
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
..+|+|+|.+|+||||+...|..
T Consensus 26 ~~ki~vvG~~~~GKSsLi~~l~~ 48 (192)
T 2il1_A 26 KLQVIIIGSRGVGKTSLMERFTD 48 (192)
T ss_dssp EEEEEEECSTTSSHHHHHHHHCC
T ss_pred ceEEEEECCCCCCHHHHHHHHhc
Confidence 35799999999999999998853
No 459
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=91.83 E-value=0.096 Score=43.73 Aligned_cols=25 Identities=4% Similarity=0.052 Sum_probs=20.9
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHH
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
....+|+|+|.+|+||||+...|..
T Consensus 15 ~~~~ki~v~G~~~~GKSsl~~~l~~ 39 (199)
T 4bas_A 15 KTKLQVVMCGLDNSGKTTIINQVKP 39 (199)
T ss_dssp -CEEEEEEECCTTSCHHHHHHHHSC
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhc
Confidence 3567899999999999999998753
No 460
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=91.83 E-value=0.14 Score=59.21 Aligned_cols=62 Identities=10% Similarity=0.166 Sum_probs=45.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhCCc-----eeeCcH----HHHHHHcCchhhhhhc---cChHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLGYT-----PLSTKE----LLETFAKQTIDSWMLA---EGSDSVVNGEC 246 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg~~-----fID~D~----lIE~~~g~sI~ei~~~---~Gee~FRelE~ 246 (345)
+++.+.|.|++|||||++|+.++..-... ||+.++ ++.+..|..+++|+.+ .+|..++.+..
T Consensus 1081 ~g~~~l~~G~~g~GKT~la~~~~~~~~~~g~~~~fi~~~~~~~~~~~~~~G~d~~~~~~~~~~~~e~~l~~~~~ 1154 (1706)
T 3cmw_A 1081 MGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDA 1154 (1706)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCChHHHHHHHHHHhhhcCCceeEEEcccchHHHHHHHhCCCHHHHhhccccchHHHHHHHHH
Confidence 46668889999999999999988755444 888765 4555668888888754 26666666554
No 461
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=91.80 E-value=0.15 Score=48.51 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=29.3
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHh--h---------CCceeeCcH
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVG--L---------GYTPLSTKE 219 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~--L---------g~~fID~D~ 219 (345)
...+..+.|.|++|+||||++..+|.. + +.-|||++.
T Consensus 119 l~~G~i~~I~G~~GsGKTtla~~la~~~~~~~~~gg~~~~vlyi~~E~ 166 (343)
T 1v5w_A 119 IESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTEN 166 (343)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSS
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHhcccccCCCCCeEEEEECCC
Confidence 335678899999999999999999986 2 244888765
No 462
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=91.76 E-value=0.1 Score=44.46 Aligned_cols=23 Identities=4% Similarity=0.046 Sum_probs=20.2
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
..+|+|+|.+|+||||+...|..
T Consensus 25 ~~ki~v~G~~~~GKSsLi~~l~~ 47 (200)
T 2o52_A 25 LFKFLVIGSAGTGKSCLLHQFIE 47 (200)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHC
T ss_pred ceEEEEECcCCCCHHHHHHHHHh
Confidence 46899999999999999998863
No 463
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=91.76 E-value=0.11 Score=43.93 Aligned_cols=25 Identities=20% Similarity=0.224 Sum_probs=21.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 19 ~~~~i~v~G~~~~GKSsli~~l~~~ 43 (213)
T 3cph_A 19 SIMKILLIGDSGVGKSCLLVRFVED 43 (213)
T ss_dssp -CEEEEEECSTTSSHHHHHHHHHHC
T ss_pred cceEEEEECCCCCCHHHHHHHHHhC
Confidence 3568999999999999999988743
No 464
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=91.72 E-value=0.12 Score=44.95 Aligned_cols=26 Identities=19% Similarity=0.363 Sum_probs=21.9
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHH
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
...+..++|.|.+|+|||+++-.+|.
T Consensus 27 l~~G~l~~i~G~pG~GKT~l~l~~~~ 52 (251)
T 2zts_A 27 FPEGTTVLLTGGTGTGKTTFAAQFIY 52 (251)
T ss_dssp EETTCEEEEECCTTSSHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 44578899999999999999987653
No 465
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=91.72 E-value=0.11 Score=44.42 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=21.2
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 25 ~~ki~vvG~~~~GKSsli~~l~~~ 48 (207)
T 2fv8_A 25 RKKLVVVGDGACGKTCLLIVFSKD 48 (207)
T ss_dssp EEEEEEEECTTSSHHHHHHHHHHS
T ss_pred CcEEEEECcCCCCHHHHHHHHhcC
Confidence 458999999999999999988763
No 466
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=91.71 E-value=0.095 Score=44.68 Aligned_cols=25 Identities=16% Similarity=0.053 Sum_probs=21.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+|+|+|.+|+||||+...|...
T Consensus 8 ~~~ki~i~G~~~~GKTsli~~l~~~ 32 (212)
T 2j0v_A 8 KFIKCVTVGDGAVGKTCMLICYTSN 32 (212)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHS
T ss_pred ceEEEEEECCCCCCHHHHHHHHhcC
Confidence 3468999999999999999988754
No 467
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=91.65 E-value=0.084 Score=45.14 Aligned_cols=23 Identities=22% Similarity=0.189 Sum_probs=20.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELA 207 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA 207 (345)
...+|+|+|.+|+||||+...|.
T Consensus 22 ~~~ki~vvG~~~vGKSsLi~~l~ 44 (195)
T 3cbq_A 22 GIFKVMLVGESGVGKSTLAGTFG 44 (195)
T ss_dssp CEEEEEEECSTTSSHHHHHHHTC
T ss_pred cEEEEEEECCCCCCHHHHHHHHH
Confidence 34689999999999999999874
No 468
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=91.63 E-value=0.12 Score=43.36 Aligned_cols=23 Identities=17% Similarity=0.175 Sum_probs=20.9
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 19 ~ki~v~G~~~~GKssli~~l~~~ 41 (194)
T 2atx_A 19 LKCVVVGDGAVGKTCLLMSYAND 41 (194)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 58999999999999999999865
No 469
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=91.62 E-value=0.11 Score=44.46 Aligned_cols=22 Identities=14% Similarity=0.152 Sum_probs=20.0
Q ss_pred ceEEEEcCCCCChHHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
.+|+|+|.+|+||||+...|..
T Consensus 26 ~ki~vvG~~~~GKSsLi~~l~~ 47 (217)
T 2f7s_A 26 IKLLALGDSGVGKTTFLYRYTD 47 (217)
T ss_dssp EEEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEEECcCCCCHHHHHHHHhc
Confidence 5799999999999999998874
No 470
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=91.59 E-value=0.1 Score=54.14 Aligned_cols=25 Identities=16% Similarity=0.215 Sum_probs=22.1
Q ss_pred CceEEEEcCCCCChHHHHHHHHHhh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+..+.|+|++||||||+.+.|+-.+
T Consensus 378 GEiv~iiG~NGsGKSTLlk~l~Gl~ 402 (608)
T 3j16_B 378 SEILVMMGENGTGKTTLIKLLAGAL 402 (608)
T ss_dssp TCEEEEESCTTSSHHHHHHHHHTSS
T ss_pred ceEEEEECCCCCcHHHHHHHHhcCC
Confidence 4668999999999999999998765
No 471
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=91.59 E-value=0.11 Score=50.50 Aligned_cols=49 Identities=12% Similarity=0.178 Sum_probs=34.9
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhh---C--CceeeCcH----HHHHHHcCchhh
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGL---G--YTPLSTKE----LLETFAKQTIDS 231 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~L---g--~~fID~D~----lIE~~~g~sI~e 231 (345)
...+..+.|.|++|+||||++..+|..+ | .-|+|++. ...+..|.....
T Consensus 58 i~~G~i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~~~ra~rlgv~~~~ 115 (356)
T 3hr8_A 58 YPRGRIVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKS 115 (356)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHHTCCGGG
T ss_pred ccCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccchHHHHHcCCchhh
Confidence 3356789999999999999999998764 3 34788765 334445555443
No 472
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=91.58 E-value=0.13 Score=50.55 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=27.5
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-----------CceeeCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-----------YTPLSTKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-----------~~fID~D~ 219 (345)
.+..+.|+|++|+||||++..|+-..- .-|+|+..
T Consensus 177 ~Gei~~I~G~sGsGKTTLl~~la~~~~~p~~~Gg~~~~viyid~E~ 222 (400)
T 3lda_A 177 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEG 222 (400)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSS
T ss_pred CCcEEEEEcCCCCChHHHHHHHHHHhccCcccCCCCCcEEEEeCCC
Confidence 577899999999999999997763322 45788765
No 473
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=91.56 E-value=0.11 Score=46.94 Aligned_cols=24 Identities=13% Similarity=0.138 Sum_probs=20.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
...+|+|+|.+|+||||+...|..
T Consensus 20 ~~l~I~lvG~~g~GKSSlin~l~~ 43 (247)
T 3lxw_A 20 STRRLILVGRTGAGKSATGNSILG 43 (247)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHT
T ss_pred CceEEEEECCCCCcHHHHHHHHhC
Confidence 456899999999999999988753
No 474
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=91.55 E-value=0.12 Score=44.00 Aligned_cols=24 Identities=13% Similarity=0.213 Sum_probs=21.2
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 25 ~~ki~vvG~~~~GKSsli~~l~~~ 48 (201)
T 2gco_A 25 RKKLVIVGDGACGKTCLLIVFSKD 48 (201)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred ceEEEEECCCCCCHHHHHHHHHhC
Confidence 357999999999999999998764
No 475
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=91.52 E-value=0.067 Score=44.21 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=10.2
Q ss_pred ceEEEEcCCCCChHHHHHHHHH
Q 019172 187 TSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
.+|+|+|.+|+||||+...|..
T Consensus 9 ~ki~v~G~~~~GKssl~~~l~~ 30 (183)
T 2fu5_C 9 FKLLLIGDSGVGKTCVLFRFSE 30 (183)
T ss_dssp EEEEEECCCCC-----------
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 5799999999999999988763
No 476
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=91.47 E-value=0.091 Score=43.98 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=21.6
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+..+|+|+|.+|+||||+...|...-
T Consensus 20 ~~~ki~v~G~~~~GKSsli~~l~~~~ 45 (190)
T 2h57_A 20 KEVHVLCLGLDNSGKTTIINKLKPSN 45 (190)
T ss_dssp -CEEEEEEECTTSSHHHHHHHTSCGG
T ss_pred CccEEEEECCCCCCHHHHHHHHhcCC
Confidence 45789999999999999999886543
No 477
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=91.45 E-value=0.11 Score=48.24 Aligned_cols=27 Identities=11% Similarity=0.024 Sum_probs=23.2
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
...+..+.|.|.+|+|||+++..+|..
T Consensus 95 l~~g~i~~i~G~~gsGKT~la~~la~~ 121 (322)
T 2i1q_A 95 LESQSVTEFAGVFGSGKTQIMHQSCVN 121 (322)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHH
T ss_pred ccCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 335678999999999999999999864
No 478
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=91.40 E-value=0.31 Score=44.82 Aligned_cols=52 Identities=19% Similarity=0.221 Sum_probs=35.8
Q ss_pred chhHhhHHHHHHhhhhhc---CCceEEEEcC-CCCChHHHHHHHHHhh---C--CceeeCc
Q 019172 167 PDIVESWESLTAGSMQLL---KGTSIFLVGD-STEVNEKVALELAVGL---G--YTPLSTK 218 (345)
Q Consensus 167 ~~~~~~~~~l~a~~~~~l---~~~~IvLIG~-~GSGKSTVAk~LA~~L---g--~~fID~D 218 (345)
....|..+.|...+.-.. ..+.|.++|. +|+||||++..||..| | .-+||+|
T Consensus 60 ~~~~Ea~r~lrt~l~~~~~~~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 60 SPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp SHHHHHHHHHHHHHHHSSTTCCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHHHhhccCCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 345566776666443322 2456777765 7999999999998876 3 4578988
No 479
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=91.30 E-value=0.13 Score=43.99 Aligned_cols=24 Identities=25% Similarity=0.292 Sum_probs=20.8
Q ss_pred CceEEEEcCCCCChHHHHHHHHHh
Q 019172 186 GTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
..+|+|+|.+|+||||+...|...
T Consensus 29 ~~ki~vvG~~~vGKSsli~~l~~~ 52 (201)
T 2hup_A 29 LFKLVLVGDASVGKTCVVQRFKTG 52 (201)
T ss_dssp EEEEEEEECTTSSHHHHHHHHHHS
T ss_pred ceEEEEECcCCCCHHHHHHHHhhC
Confidence 357999999999999999988653
No 480
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=91.26 E-value=0.13 Score=51.66 Aligned_cols=28 Identities=11% Similarity=0.160 Sum_probs=24.2
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
...+..+.|+|++|+||||+++.++..+
T Consensus 278 i~~G~i~~i~G~~GsGKSTLl~~l~g~~ 305 (525)
T 1tf7_A 278 FFKDSIILATGATGTGKTLLVSRFVENA 305 (525)
T ss_dssp EESSCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4467889999999999999999998654
No 481
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=91.23 E-value=0.13 Score=44.53 Aligned_cols=26 Identities=23% Similarity=0.211 Sum_probs=21.5
Q ss_pred cCCceEEEEcCCCCChHHHHHHHHHh
Q 019172 184 LKGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 184 l~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
....+|+|+|.+|+||||+...|...
T Consensus 25 ~~~~ki~vvG~~~vGKSsL~~~l~~~ 50 (214)
T 3q3j_B 25 VARCKLVLVGDVQCGKTAMLQVLAKD 50 (214)
T ss_dssp --CEEEEEECSTTSSHHHHHHHHHHS
T ss_pred cceEEEEEECcCCCCHHHHHHHHhcC
Confidence 35678999999999999999988754
No 482
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=91.22 E-value=0.12 Score=51.40 Aligned_cols=35 Identities=20% Similarity=0.122 Sum_probs=28.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhhC-----CceeeCcH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGLG-----YTPLSTKE 219 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~Lg-----~~fID~D~ 219 (345)
.+..|.++|+.|+||||++..||..+. .-++|.|-
T Consensus 97 ~~~vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~ 136 (425)
T 2ffh_A 97 DRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADT 136 (425)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccc
Confidence 356788999999999999999998763 45678774
No 483
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=91.22 E-value=0.12 Score=44.54 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=20.9
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
+..+|+|+|.+|+||||+...|..
T Consensus 33 ~~~ki~vvG~~~vGKSsli~~l~~ 56 (214)
T 2j1l_A 33 RSVKVVLVGDGGCGKTSLLMVFAD 56 (214)
T ss_dssp CEEEEEEEECTTSSHHHHHHHHHC
T ss_pred ceEEEEEECcCCCCHHHHHHHHHc
Confidence 346899999999999999998864
No 484
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=91.20 E-value=0.12 Score=45.01 Aligned_cols=23 Identities=13% Similarity=0.092 Sum_probs=20.3
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
..+|+|+|.+|+||||+...|..
T Consensus 29 ~~kI~vvG~~~vGKSsLin~l~~ 51 (228)
T 2qu8_A 29 KKTIILSGAPNVGKSSFMNIVSR 51 (228)
T ss_dssp SEEEEEECSTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 46899999999999999998754
No 485
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=91.16 E-value=0.13 Score=43.29 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=19.8
Q ss_pred eEEEEcCCCCChHHHHHHHHHhh
Q 019172 188 SIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 188 ~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
-.+|+|+.|+|||||-.++.-.|
T Consensus 25 ~~~I~G~NGsGKStil~Ai~~~l 47 (149)
T 1f2t_A 25 INLIIGQNGSGKSSLLDAILVGL 47 (149)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 45789999999999999887666
No 486
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=91.16 E-value=0.13 Score=43.82 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=20.4
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+|||||-..+...
T Consensus 7 ~kv~lvG~~~vGKSsL~~~~~~~ 29 (192)
T 2cjw_A 7 YRVVLIGEQGVGKSTLANIFAGV 29 (192)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 57999999999999999998753
No 487
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=91.14 E-value=0.096 Score=43.68 Aligned_cols=23 Identities=9% Similarity=0.250 Sum_probs=20.1
Q ss_pred CCceEEEEcCCCCChHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELA 207 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA 207 (345)
+..+|+|+|.+|+||||+...|.
T Consensus 21 ~~~~i~v~G~~~~GKssli~~l~ 43 (189)
T 2x77_A 21 RKIRVLMLGLDNAGKTSILYRLH 43 (189)
T ss_dssp SCEEEEEEEETTSSHHHHHHHTC
T ss_pred CceEEEEECCCCCCHHHHHHHHH
Confidence 35689999999999999999873
No 488
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=91.11 E-value=0.26 Score=46.07 Aligned_cols=52 Identities=13% Similarity=0.129 Sum_probs=35.9
Q ss_pred hhHhhHHHHHHhhhhhc---CCceEEEEcC-CCCChHHHHHHHHHhhC-----CceeeCcH
Q 019172 168 DIVESWESLTAGSMQLL---KGTSIFLVGD-STEVNEKVALELAVGLG-----YTPLSTKE 219 (345)
Q Consensus 168 ~~~~~~~~l~a~~~~~l---~~~~IvLIG~-~GSGKSTVAk~LA~~Lg-----~~fID~D~ 219 (345)
...|....|...+...+ ..+.|.++|. +|+||||++..||..|. .-+||+|-
T Consensus 83 ~~~Ea~r~lrt~l~~~~~~~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 83 SAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp HHHHHHHHHHHHHHHHTSSCSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34566666655433222 3467888886 79999999999988763 45788885
No 489
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=91.10 E-value=0.22 Score=43.41 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=27.1
Q ss_pred CceEEEEc-CCCCChHHHHHHHHHhhCCc------eeeCcHH
Q 019172 186 GTSIFLVG-DSTEVNEKVALELAVGLGYT------PLSTKEL 220 (345)
Q Consensus 186 ~~~IvLIG-~~GSGKSTVAk~LA~~Lg~~------fID~D~l 220 (345)
++.|.+++ -.|+||||++-.||..|... +||+|--
T Consensus 4 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 34566654 57899999999999988765 8899843
No 490
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=91.09 E-value=0.1 Score=51.73 Aligned_cols=25 Identities=8% Similarity=-0.017 Sum_probs=21.7
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+..+.|+|++||||||+.+.|+-.
T Consensus 68 ~~~~valvG~nGaGKSTLln~L~Gl 92 (413)
T 1tq4_A 68 SVLNVAVTGETGSGKSSFINTLRGI 92 (413)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHTC
T ss_pred CCeEEEEECCCCCcHHHHHHHHhCC
Confidence 3448899999999999999999874
No 491
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=90.94 E-value=0.15 Score=46.50 Aligned_cols=26 Identities=8% Similarity=-0.015 Sum_probs=22.3
Q ss_pred CCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
+++-++++|.||+||||.+-.+|.++
T Consensus 27 ~G~l~vitG~MgsGKTT~lL~~a~r~ 52 (214)
T 2j9r_A 27 NGWIEVICGSMFSGKSEELIRRVRRT 52 (214)
T ss_dssp SCEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 45667889999999999999888776
No 492
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=90.88 E-value=0.14 Score=51.95 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=22.0
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhhC
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGLG 211 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~Lg 211 (345)
..+.|+|++||||||+.+.|+-.+.
T Consensus 30 e~~~liG~nGsGKSTLl~~l~Gl~~ 54 (483)
T 3euj_A 30 LVTTLSGGNGAGKSTTMAGFVTALI 54 (483)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred ceEEEECCCCCcHHHHHHHHhcCCC
Confidence 5688999999999999999997763
No 493
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=90.86 E-value=0.16 Score=52.02 Aligned_cols=29 Identities=17% Similarity=0.069 Sum_probs=24.5
Q ss_pred hhcCCceEEEEcCCCCChHHHHHHHHHhh
Q 019172 182 QLLKGTSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 182 ~~l~~~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..+....++|.|++|+||||+.+.++..+
T Consensus 200 ~~~~~~~~~I~G~pGTGKTt~i~~l~~~l 228 (574)
T 3e1s_A 200 QLAGHRLVVLTGGPGTGKSTTTKAVADLA 228 (574)
T ss_dssp HHTTCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHhCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 34567889999999999999999988754
No 494
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=90.72 E-value=0.16 Score=51.04 Aligned_cols=23 Identities=17% Similarity=0.167 Sum_probs=20.9
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
...|.|+||.|.||||+|+.++.
T Consensus 152 ~~vv~I~G~gGvGKTtLA~~v~~ 174 (549)
T 2a5y_B 152 SFFLFLHGRAGSGKSVIASQALS 174 (549)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHH
Confidence 36788999999999999999995
No 495
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=90.68 E-value=0.14 Score=56.31 Aligned_cols=24 Identities=8% Similarity=0.032 Sum_probs=22.2
Q ss_pred CCceEEEEcCCCCChHHHHHHHHH
Q 019172 185 KGTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 185 ~~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
.|..+.|+|++||||||+.+.|+.
T Consensus 460 ~Ge~v~LiGpNGsGKSTLLk~Lag 483 (986)
T 2iw3_A 460 RARRYGICGPNGCGKSTLMRAIAN 483 (986)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhC
Confidence 578899999999999999999994
No 496
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=90.66 E-value=0.16 Score=44.02 Aligned_cols=23 Identities=22% Similarity=0.267 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCChHHHHHHHHHh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVG 209 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~ 209 (345)
.+|+|+|.+|+||||+...|...
T Consensus 14 ~ki~v~G~~~vGKSsli~~l~~~ 36 (223)
T 3cpj_B 14 FKIVLIGDSGVGKSNLLSRFTKN 36 (223)
T ss_dssp EEEEEESCTTSSHHHHHHHHHHC
T ss_pred eEEEEECcCCCCHHHHHHHHhcC
Confidence 57999999999999999998754
No 497
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=90.55 E-value=0.15 Score=50.09 Aligned_cols=24 Identities=8% Similarity=0.061 Sum_probs=22.1
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
..++|.|++|+||||+...++..|
T Consensus 46 ~~~li~G~aGTGKT~ll~~~~~~l 69 (459)
T 3upu_A 46 HHVTINGPAGTGATTLTKFIIEAL 69 (459)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHH
Confidence 389999999999999999999877
No 498
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=90.41 E-value=0.12 Score=51.17 Aligned_cols=24 Identities=17% Similarity=0.153 Sum_probs=20.5
Q ss_pred ceEEEEcCCCCChHHHHHHHHHhh
Q 019172 187 TSIFLVGDSTEVNEKVALELAVGL 210 (345)
Q Consensus 187 ~~IvLIG~~GSGKSTVAk~LA~~L 210 (345)
-+|.|+|.+|+||||+.+.|+...
T Consensus 32 f~I~lvG~sGaGKSTLln~L~g~~ 55 (418)
T 2qag_C 32 FTLMVVGESGLGKSTLINSLFLTD 55 (418)
T ss_dssp EEEEEECCTTSSHHHHHHHHTTCC
T ss_pred EEEEEECCCCCcHHHHHHHHhCCC
Confidence 358999999999999999987543
No 499
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=90.37 E-value=0.32 Score=43.60 Aligned_cols=30 Identities=17% Similarity=0.026 Sum_probs=25.4
Q ss_pred hcCCceEEEEcCCCCChHHHHHHHHHhhCC
Q 019172 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGY 212 (345)
Q Consensus 183 ~l~~~~IvLIG~~GSGKSTVAk~LA~~Lg~ 212 (345)
.+.+.+++|+|++|+|||.++..++..++.
T Consensus 105 ~~~~~~~ll~~~tG~GKT~~a~~~~~~~~~ 134 (237)
T 2fz4_A 105 WLVDKRGCIVLPTGSGKTHVAMAAINELST 134 (237)
T ss_dssp HTTTSEEEEEESSSTTHHHHHHHHHHHSCS
T ss_pred HHhCCCEEEEeCCCCCHHHHHHHHHHHcCC
Confidence 445667999999999999999999988753
No 500
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens}
Probab=90.32 E-value=0.15 Score=50.74 Aligned_cols=23 Identities=13% Similarity=-0.058 Sum_probs=20.4
Q ss_pred CceEEEEcCCCCChHHHHHHHHH
Q 019172 186 GTSIFLVGDSTEVNEKVALELAV 208 (345)
Q Consensus 186 ~~~IvLIG~~GSGKSTVAk~LA~ 208 (345)
...|.|+|+.|.||||+++.++.
T Consensus 147 ~~~v~I~G~~GiGKTtLa~~~~~ 169 (591)
T 1z6t_A 147 PGWVTIHGMAGCGKSVLAAEAVR 169 (591)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHC
T ss_pred CceEEEEcCCCCCHHHHHHHHHh
Confidence 45788999999999999999864
Done!