Query 019179
Match_columns 345
No_of_seqs 240 out of 1735
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 12:07:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019179.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019179hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 3.5E-46 1.2E-50 353.9 26.8 231 80-341 47-370 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 4E-45 1.4E-49 347.5 18.8 231 81-341 53-383 (383)
3 1tzs_A Cathepsin E; hydrolase, 100.0 7.6E-44 2.6E-48 335.9 22.8 233 83-344 17-345 (351)
4 4aa9_A Chymosin; hydrolase, as 100.0 4.1E-44 1.4E-48 333.6 20.2 229 82-341 4-320 (320)
5 3cms_A Chymosin B; hydrolase, 100.0 3.8E-44 1.3E-48 334.2 19.4 229 82-341 7-323 (323)
6 3c9x_A Trichoderma reesei aspa 100.0 1.4E-43 4.8E-48 331.2 22.3 228 84-340 10-329 (329)
7 2apr_A Rhizopuspepsin; hydrola 100.0 2.1E-43 7.3E-48 329.4 23.1 231 80-341 6-324 (325)
8 1mpp_A Pepsin; hydrolase(acid 100.0 2.4E-43 8E-48 333.8 21.6 233 83-344 12-358 (361)
9 3vla_A EDGP; extracellular, in 100.0 2.4E-43 8.3E-48 338.6 21.5 242 85-341 16-399 (413)
10 1htr_B Gastricsin; aspartyl pr 100.0 3.5E-43 1.2E-47 328.5 21.9 226 85-341 8-329 (329)
11 1am5_A Pepsin, acid proteinase 100.0 3.5E-43 1.2E-47 327.8 21.5 227 84-341 7-324 (324)
12 1oew_A Endothiapepsin; hydrola 100.0 2.4E-43 8.2E-48 329.6 20.0 226 85-340 11-329 (329)
13 1dpj_A Proteinase A; proteinas 100.0 4.4E-43 1.5E-47 327.8 21.4 228 83-341 7-329 (329)
14 2bju_A Plasmepsin II; aspartic 100.0 6.5E-43 2.2E-47 337.9 21.0 228 83-341 132-450 (453)
15 1j71_A Candidapepsin, aspartic 100.0 8.7E-43 3E-47 326.5 20.6 226 81-344 4-327 (334)
16 3k1w_A Renin; protease, altern 100.0 6E-43 2.1E-47 328.4 18.7 231 81-341 10-340 (341)
17 3fv3_A SAPP1P-secreted asparti 100.0 3.4E-42 1.1E-46 323.1 22.1 225 81-344 4-332 (339)
18 1qdm_A Prophytepsin; aspartic 100.0 6.1E-42 2.1E-46 334.2 24.6 234 82-341 45-478 (478)
19 1miq_A Plasmepsin; aspartic pr 100.0 3.5E-42 1.2E-46 327.0 21.6 228 82-341 55-374 (375)
20 3qvc_A Histo-aspartic protease 100.0 2.9E-42 1E-46 333.7 21.2 229 81-341 129-449 (451)
21 2qzx_A Candidapepsin-5; aspart 100.0 2.7E-42 9.2E-47 324.2 19.0 226 81-344 4-334 (342)
22 3aup_A SBG7S, BG, basic 7S glo 100.0 1.2E-41 4E-46 326.6 23.2 245 85-344 17-396 (403)
23 1yg9_A Aspartic protease BLA G 100.0 1.4E-41 4.9E-46 317.7 22.2 228 82-341 10-329 (330)
24 3pvk_A Candidapepsin-2; hydrol 100.0 8.3E-42 2.8E-46 320.8 20.3 226 81-344 4-334 (342)
25 1ibq_A Aspergillopepsin; aspar 100.0 2.1E-41 7.1E-46 316.0 22.4 224 85-341 10-325 (325)
26 1izd_A Aspartic proteinase; su 100.0 2E-41 7E-46 315.7 20.2 224 85-341 11-323 (323)
27 1bxo_A Protein (penicillopepsi 100.0 1.8E-41 6.3E-46 316.1 15.6 224 85-341 11-323 (323)
28 3lpj_A Beta-secretase 1; alzhe 100.0 2.6E-39 8.8E-44 314.9 25.0 232 86-345 71-424 (455)
29 2ewy_A Beta-secretase 2; BACE2 100.0 9.3E-39 3.2E-43 304.6 24.1 232 83-344 7-358 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 1.4E-38 4.9E-43 305.1 22.0 228 87-344 26-377 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 8.1E-38 2.8E-42 299.2 25.4 228 86-344 18-370 (395)
32 1wkr_A Polyporopepsin; hydrola 100.0 2.6E-38 8.9E-43 296.8 19.7 219 83-344 6-336 (340)
33 1t6e_X Xylanase inhibitor; two 100.0 4.4E-37 1.5E-41 292.7 16.6 233 85-341 10-373 (381)
34 1b5f_A Protein (cardosin A); h 99.9 1.4E-26 4.8E-31 206.4 10.6 123 82-230 6-131 (239)
35 1lya_A Cathepsin D; lysosomal 99.9 1.4E-24 4.8E-29 165.5 8.3 89 82-191 6-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.9 2.3E-21 7.8E-26 172.8 15.0 142 197-341 3-241 (241)
37 1b5f_B Protein (cardosin A); h 99.8 1.1E-18 3.8E-23 130.4 9.1 78 261-341 3-87 (87)
38 2i1a_A DNA damage-inducible pr 93.8 0.056 1.9E-06 43.2 4.2 31 87-119 23-53 (148)
39 1fmb_A EIAV protease; hydrolas 87.9 0.54 1.9E-05 35.1 4.1 25 92-118 10-34 (104)
40 2hs1_A HIV-1 protease; ultra-h 87.2 0.64 2.2E-05 34.4 4.1 27 92-120 10-36 (99)
41 3ec0_A Protease; HIV-2, inhibi 84.4 1 3.4E-05 33.3 3.9 27 92-120 10-36 (99)
42 3liy_A Protease; hydrolase, hy 82.1 1.3 4.4E-05 33.5 3.7 32 92-123 12-46 (116)
43 2hah_A Protease, retropepsin; 81.0 1.5 5.2E-05 33.3 3.8 26 92-120 16-41 (116)
44 3sqf_A Protease; folded monome 77.3 2.6 8.9E-05 31.9 4.1 29 92-122 11-39 (114)
45 3s8i_A Protein DDI1 homolog 1; 76.8 2.3 7.7E-05 33.8 3.9 31 88-120 22-52 (148)
46 3slz_A GAG-Pro-POL polyprotein 66.8 5.6 0.00019 30.9 3.9 27 91-119 23-49 (132)
47 3ka2_A [L-Ala51;Gly51']HIV-1 p 64.4 6 0.00021 33.1 3.9 26 92-119 10-35 (203)
48 2rsp_A RSV protease; hydrolase 61.9 6.4 0.00022 30.2 3.3 24 97-122 27-50 (124)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 42.7 22 0.00077 29.6 3.9 26 92-119 114-139 (203)
50 3c9x_A Trichoderma reesei aspa 41.7 26 0.00088 31.3 4.5 34 87-120 191-230 (329)
51 1bxo_A Protein (penicillopepsi 38.1 27 0.00091 31.1 4.0 34 87-120 187-224 (323)
52 2i1a_A DNA damage-inducible pr 36.0 11 0.00038 29.3 1.0 28 312-339 108-135 (148)
53 1oew_A Endothiapepsin; hydrola 35.9 30 0.001 30.8 4.0 34 87-120 190-229 (329)
54 1ibq_A Aspergillopepsin; aspar 35.5 37 0.0013 30.1 4.6 34 87-120 186-225 (325)
55 1b5f_A Protein (cardosin A); h 34.7 40 0.0014 28.5 4.4 32 89-120 188-227 (239)
56 2apr_A Rhizopuspepsin; hydrola 34.7 33 0.0011 30.4 4.1 34 87-120 191-229 (325)
57 1izd_A Aspartic proteinase; su 31.3 39 0.0013 30.0 4.0 34 87-120 187-225 (323)
58 1lya_B Cathepsin D; lysosomal 30.3 46 0.0016 27.9 4.1 32 89-120 99-137 (241)
59 3s8i_A Protein DDI1 homolog 1; 26.3 27 0.00092 27.4 1.7 30 311-340 106-135 (148)
60 1qdm_A Prophytepsin; aspartic 20.6 88 0.003 29.5 4.4 32 89-120 231-270 (478)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=3.5e-46 Score=353.88 Aligned_cols=231 Identities=24% Similarity=0.455 Sum_probs=188.2
Q ss_pred cccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCC
Q 019179 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (345)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~ 159 (345)
.+++.++.+.+|+++|.||||||+|+|+|||||+++||+|..|....| +.++.|||++|+||+..+
T Consensus 47 ~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C--~~~~~y~~~~SsT~~~~~------------ 112 (370)
T 3psg_A 47 DEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLAC--SDHNQFNPDDSSTFEATS------------ 112 (370)
T ss_dssp CCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE------------
T ss_pred eecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCccc--CCCCCCCCccCcCcEECC------------
Confidence 345567889999999999999999999999999999999999985556 678999999999999987
Q ss_pred CCCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCC-C-CCCCceeeecCCCCCh------h
Q 019179 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------L 231 (345)
Q Consensus 160 ~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~ 231 (345)
+.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. | ...++||||||++.++ +
T Consensus 113 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 180 (370)
T 3psg_A 113 ------QELSITYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPV 180 (370)
T ss_dssp ------EEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCH
T ss_pred ------cEEEEEeCCceE-EEEEEEEEEeeCCc-----ccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCH
Confidence 999999999985 59999999999986 9999999999988763 4 5778999999998765 3
Q ss_pred HHHhhhh-----------------------cCCe----------------------e-----e-----cCCCCCcEEEcC
Q 019179 232 ISQMRTT-----------------------IAGN----------------------Q-----R-----LGVSTPDIVIDS 256 (345)
Q Consensus 232 ~~ql~~~-----------------------~g~~----------------------k-----~-----~~~~~~~~iiDs 256 (345)
+.+|.++ +|+. + . .......+||||
T Consensus 181 ~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~aiiDT 260 (370)
T 3psg_A 181 FDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDT 260 (370)
T ss_dssp HHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEECTTCEEEEECT
T ss_pred HHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEecCCCceEEEcC
Confidence 3333321 2222 0 0 112356899999
Q ss_pred ------------------------CCccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecC-
Q 019179 257 ------------------------DPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT- 310 (345)
Q Consensus 257 ------------------------~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~- 310 (345)
....+..+|.... .+|+|+|+|+|++|+||+++|+++ .+ ..|++ |...+
T Consensus 261 GTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~-~~-~~C~~~~~~~~~ 335 (370)
T 3psg_A 261 GTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSID---SLPDIVFTIDGVQYPLSPSAYILQ-DD-DSCTSGFEGMDV 335 (370)
T ss_dssp TCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGG---GCCCEEEEETTEEEEECHHHHEEE-CS-SCEEESEEEECC
T ss_pred CCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCCcc---cCCcEEEEECCEEEEECHHHhccc-CC-CEEEEEEEeCCC
Confidence 1112345677654 799999999999999999999998 33 36997 76642
Q ss_pred ----CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 311 ----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 311 ----~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
+..||||++|||++|+|||++++|||||+++
T Consensus 336 ~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 336 PTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp CTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 2369999999999999999999999999975
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=4e-45 Score=347.54 Aligned_cols=231 Identities=22% Similarity=0.397 Sum_probs=186.6
Q ss_pred ccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCCCcceecCCCCccccCCCC
Q 019179 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPP--SQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ 158 (345)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~--~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~ 158 (345)
.++.++.+.+|+++|.||||||+|+|+|||||+++||+|..|.. ..| ..++.|||++|+||+..+
T Consensus 53 ~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C--~~~~~y~~~~SsT~~~~~----------- 119 (383)
T 2x0b_A 53 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG----------- 119 (383)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHH--HTSCCBCGGGCTTCEEEE-----------
T ss_pred EeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccc--cCCCCCCCCCCCcEEECC-----------
Confidence 34446789999999999999999999999999999999999963 368 467899999999999987
Q ss_pred CCCCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCC-C-CCCCceeeecCCCCChh-----
Q 019179 159 KSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDISL----- 231 (345)
Q Consensus 159 ~~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s~----- 231 (345)
|.|.+.|++|+.. |.+++|+|+|++. .++ +.|||++...+. | ...+|||||||++.++.
T Consensus 120 -------~~~~i~Yg~Gs~~-G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~ 185 (383)
T 2x0b_A 120 -------TELTLRYSTGTVS-GFLSQDIITVGGI-----TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 185 (383)
T ss_dssp -------EEEEEECSSCEEE-EEEEEEEEEETTE-----EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------cEEEEEcCCccEE-EEEEeeEEEEcCc-----eEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCc
Confidence 9999999999854 9999999999986 888 999999987663 4 57789999999987752
Q ss_pred -HHHhhhh---------------------------cCCe---------------------------eec-----CCCCCc
Q 019179 232 -ISQMRTT---------------------------IAGN---------------------------QRL-----GVSTPD 251 (345)
Q Consensus 232 -~~ql~~~---------------------------~g~~---------------------------k~~-----~~~~~~ 251 (345)
+.+|.++ ||+. ... ......
T Consensus 186 ~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~ 265 (383)
T 2x0b_A 186 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCL 265 (383)
T ss_dssp HHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCBSTTCEE
T ss_pred HHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceEEcCCCcE
Confidence 2333221 1221 001 123467
Q ss_pred EEEcC-------------------C----CccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCC--CeEEEE-
Q 019179 252 IVIDS-------------------D----PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV- 305 (345)
Q Consensus 252 ~iiDs-------------------~----~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~--~~~C~~- 305 (345)
+|||| . ...+..+|+... .+|+|+|+|+|++|+||+++|+++... +..|+.
T Consensus 266 aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~g~~~v~C~~~~---~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~ 342 (383)
T 2x0b_A 266 ALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGP---TLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLA 342 (383)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGTT---TCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBS
T ss_pred EEEcCCCceEEcCHHHHHHHHHHhCCcccCCcEEEeccccc---cCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEE
Confidence 99999 1 112345788654 799999999999999999999987653 458996
Q ss_pred EEecC-----CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 306 FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 306 ~~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
|...+ ...||||++|||++|+|||++++|||||+++
T Consensus 343 ~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 343 IHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 87642 4689999999999999999999999999974
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.6e-44 Score=335.87 Aligned_cols=233 Identities=25% Similarity=0.449 Sum_probs=186.2
Q ss_pred ccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCC
Q 019179 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (345)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 162 (345)
..++.+..|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 17 l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~--------------- 79 (351)
T 1tzs_A 17 LINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPAC--KTHSRFQPSQSSTYSQPG--------------- 79 (351)
T ss_dssp TGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCBCCS---------------
T ss_pred ceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--CCCCcCCcccCcceEECC---------------
Confidence 335678899999999999999999999999999999999985567 567999999999999987
Q ss_pred CCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCC-C-CCCCceeeecCCCCCh------hHHH
Q 019179 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQ 234 (345)
Q Consensus 163 ~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~q 234 (345)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+. | ....+||||||++.++ ++.+
T Consensus 80 ---~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 150 (351)
T 1tzs_A 80 ---QSFSIQYGTGSL-SGIIGADQVSVEGL-----TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDN 150 (351)
T ss_dssp ---CEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHH
T ss_pred ---CEEEEEeCCCCe-EEEEEEeEEEECCe-----EECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHH
Confidence 999999999985 59999999999986 8999999999987663 4 5678999999998765 3344
Q ss_pred hhhh-------------------------cCCe-------------------------------ee-cCCCCCcEEEcC-
Q 019179 235 MRTT-------------------------IAGN-------------------------------QR-LGVSTPDIVIDS- 256 (345)
Q Consensus 235 l~~~-------------------------~g~~-------------------------------k~-~~~~~~~~iiDs- 256 (345)
|.++ +|+. +. .......+||||
T Consensus 151 l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSG 230 (351)
T 1tzs_A 151 MMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFCSEGCQAIVDTG 230 (351)
T ss_dssp HHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEECTTCEEEEECTT
T ss_pred HHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEEcCCCceEEeccC
Confidence 4321 1211 00 112346799999
Q ss_pred ----------------------CCccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCC--CeEEEE-EEecC-
Q 019179 257 ----------------------DPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT- 310 (345)
Q Consensus 257 ----------------------~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~- 310 (345)
....+..+|+... .+|+|+|+|+|++|+||+++|+++... +..|+. |.+.+
T Consensus 231 Ts~~~lP~~~~~~l~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~ 307 (351)
T 1tzs_A 231 TSLITGPSDKIKQLQNAIGAAPVDGEYAVECANLN---VMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDI 307 (351)
T ss_dssp CSSEEECHHHHHHHHHHHTCEECSSSEEECGGGGG---GSCCEEEEETTEEEEECTTTSEECC-----CCEEESEEECCC
T ss_pred CcceeCCHHHHHHHHHHhCCcccCCeEEEeCCCCc---cCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCC
Confidence 1122345787654 789999999999999999999987642 357996 87642
Q ss_pred ----CCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 311 ----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 311 ----~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
.+.||||+.|||++|+|||++++|||||+++|..
T Consensus 308 ~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 308 HPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp CTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred CCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 4689999999999999999999999999999964
No 4
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=4.1e-44 Score=333.60 Aligned_cols=229 Identities=28% Similarity=0.430 Sum_probs=185.0
Q ss_pred cccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCC
Q 019179 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (345)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c 161 (345)
++.++.+..|+++|.||||||+++|++||||+++||+|..|....| ..++.|||++|+|++..+
T Consensus 4 ~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 67 (320)
T 4aa9_A 4 PLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVC--KNHHRFDPRKSSTFRNLG-------------- 67 (320)
T ss_dssp ----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE--------------
T ss_pred cceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCcccc--CCCCCCCCCCCcCeEcCC--------------
Confidence 3456778999999999999999999999999999999999984456 567999999999999987
Q ss_pred CCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCC-C-CCCCceeeecCCCCCh------hHH
Q 019179 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LIS 233 (345)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~ 233 (345)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+. | ....+||||||++..+ ++.
T Consensus 68 ----~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 137 (320)
T 4aa9_A 68 ----KPLSIHYGTGSM-EGFLGYDTVTVSNI-----VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFD 137 (320)
T ss_dssp ----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHH
T ss_pred ----cEEEEEECCcEE-EEEEEEEEEEECCE-----eecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHH
Confidence 999999999985 59999999999986 8999999999988763 4 5678999999997654 444
Q ss_pred Hhhhh----------------------cCCe---------------------------ee-----cCCCCCcEEEcC---
Q 019179 234 QMRTT----------------------IAGN---------------------------QR-----LGVSTPDIVIDS--- 256 (345)
Q Consensus 234 ql~~~----------------------~g~~---------------------------k~-----~~~~~~~~iiDs--- 256 (345)
+|.++ +|+. +. .......+||||
T Consensus 138 ~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt 217 (320)
T 4aa9_A 138 NMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACVGGCQAILDTGTS 217 (320)
T ss_dssp HHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEESTTCEEEEECTTCS
T ss_pred HHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccCCCcEEEEECCCC
Confidence 44322 2221 00 112346799999
Q ss_pred ---------------------CCccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecC-CCc
Q 019179 257 ---------------------DPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-NSV 313 (345)
Q Consensus 257 ---------------------~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~-~~~ 313 (345)
....+..+|+... .+|+|+|+|+|++|+||+++|+.+. +..|+. |.... .+.
T Consensus 218 ~~~lP~~~~~~i~~~~~~~~~~~g~~~~~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~--~~~C~~~i~~~~~~~~ 292 (320)
T 4aa9_A 218 VLFGPSSDILKIQMAIGATENRYGEFDVNCGNLR---SMPTVVFEINGRDYPLSPSAYTSKD--QGFCTSGFQGDNNSEL 292 (320)
T ss_dssp SEEEEHHHHHHHHHHTTCEECTTSCEEECGGGGG---GCCCEEEEETTEEEEECHHHHEEEE--TTEEEESEEEETTCCC
T ss_pred cEECCHHHHHHHHHHhCCcccCCCcEEEeCCCCC---cCceEEEEECCEEEEECHHHhccCC--CCeEEEEEEcCCCCCc
Confidence 1122345677654 7899999999999999999999873 358997 77654 467
Q ss_pred ceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 314 PIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 314 ~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
||||++|||++|+|||++++|||||+++
T Consensus 293 ~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 293 WILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEChHHhcceEEEEECCCCEEEEEecC
Confidence 9999999999999999999999999975
No 5
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=3.8e-44 Score=334.24 Aligned_cols=229 Identities=23% Similarity=0.380 Sum_probs=185.4
Q ss_pred cccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCC
Q 019179 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (345)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c 161 (345)
++.++.+..|+++|.||||+|+++|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 7 ~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 70 (323)
T 3cms_A 7 PLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNAC--KNHQRFDPRKSSTFQNLG-------------- 70 (323)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE--------------
T ss_pred eeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccc--cCCCCCCCccCCCeEECC--------------
Confidence 3445678999999999999999999999999999999999964478 467899999999999987
Q ss_pred CCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCC-CC-CCCCceeeecCCCCCh------hHH
Q 019179 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS------LIS 233 (345)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------~~~ 233 (345)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+ .| ....+||||||++.++ ++.
T Consensus 71 ----~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 140 (323)
T 3cms_A 71 ----KPLSIHYGTGSM-QGILGYDTVTVSNI-----VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFD 140 (323)
T ss_dssp ----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHH
T ss_pred ----cEEEEEeCCCCe-EEEEEEEEEEECCe-----EEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHH
Confidence 999999999985 59999999999986 899999999998766 34 4678999999998664 334
Q ss_pred Hhhhh----------------------cCCe-------------------------------ee-cCCCCCcEEEcCC--
Q 019179 234 QMRTT----------------------IAGN-------------------------------QR-LGVSTPDIVIDSD-- 257 (345)
Q Consensus 234 ql~~~----------------------~g~~-------------------------------k~-~~~~~~~~iiDs~-- 257 (345)
+|.++ +|+. +. .......+||||+
T Consensus 141 ~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt 220 (323)
T 3cms_A 141 NMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACEGGCQAILDTGTS 220 (323)
T ss_dssp HHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEESTTCEEEEECTTCC
T ss_pred HHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecCCCcEEEEecCCc
Confidence 44321 2221 00 1123467999991
Q ss_pred ----------------------CccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecC-CCc
Q 019179 258 ----------------------PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-NSV 313 (345)
Q Consensus 258 ----------------------~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~-~~~ 313 (345)
...+..+|+... .+|+|+|+|+|++|+||+++|+++ ++..|+. |++.+ .+.
T Consensus 221 ~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~--~~~~C~~~i~~~~~~~~ 295 (323)
T 3cms_A 221 KLVGPSSDILNIQQAIGATQNQYGEFDIDCDNLS---YMPTVVFEINGKMYPLTPSAYTSQ--DQGFCTSGFQSENHSQK 295 (323)
T ss_dssp SEEECHHHHHHHHHHHTCEEETTTEEEECTTCTT---TSCCEEEEETTEEEEECHHHHEEE--ETTEEEESEEEC---CC
T ss_pred cEeCCHHHHHHHHHHhCCeecCCCcEEEECCCCc---cCceEEEEECCEEEEECHHHhccC--CCCEEEEEEEeCCCCCc
Confidence 112345677654 799999999999999999999998 3458997 88764 578
Q ss_pred ceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 314 PIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 314 ~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
||||+.|||++|+|||++++|||||+++
T Consensus 296 ~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 296 WILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhhceEEEEECCCCEEEEEECC
Confidence 9999999999999999999999999975
No 6
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.4e-43 Score=331.21 Aligned_cols=228 Identities=21% Similarity=0.347 Sum_probs=184.4
Q ss_pred cccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCC
Q 019179 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (345)
Q Consensus 84 ~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~ 163 (345)
..+.+..|+++|.||||+|+++|+|||||+++||+|.+|. .|.++.++.|||++|+|++.+.|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~~~~~~y~~~~SsT~~~~~~--------------- 72 (329)
T 3c9x_A 10 SDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP--KSSATGHAIYTPSKSSTSKKVSG--------------- 72 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCGGGCTTCEECTT---------------
T ss_pred CCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC--ccccCCCCcCCcccCcCceEcCC---------------
Confidence 4567889999999999999999999999999999999998 67667889999999999998642
Q ss_pred CCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCC--CCCCceeeecCCCCCh---------hH
Q 019179 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LI 232 (345)
Q Consensus 164 ~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~ 232 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++...+.| ....+||||||++.++ ++
T Consensus 73 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 145 (329)
T 3c9x_A 73 --ASWSISYGDGSSSSGDVYTDKVTIGGF-----SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWF 145 (329)
T ss_dssp --CBEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHH
Confidence 899999999997779999999999986 89999999999876644 3678999999997654 34
Q ss_pred HHhhhh-------------------cCCe----------------------------eec----CCCCCcEEEcCC----
Q 019179 233 SQMRTT-------------------IAGN----------------------------QRL----GVSTPDIVIDSD---- 257 (345)
Q Consensus 233 ~ql~~~-------------------~g~~----------------------------k~~----~~~~~~~iiDs~---- 257 (345)
.+|..+ +|+. +.. ......+||||+
T Consensus 146 ~~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 225 (329)
T 3c9x_A 146 SNAASSLAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLL 225 (329)
T ss_dssp HHHHTTSSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSE
T ss_pred HHHHHhcCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCcE
Confidence 444322 2221 001 123457999990
Q ss_pred ------------C----------ccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCC--CeEEEE-EEecC-C
Q 019179 258 ------------P----------TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT-N 311 (345)
Q Consensus 258 ------------~----------~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~-~ 311 (345)
. ..+..+|+ ..+|+|+|+|+|++|+||+++|++...+ ...|++ |.+.+ .
T Consensus 226 ~lp~~~~~~i~~~i~~a~~~~~~~~~~~~C~-----~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~ 300 (329)
T 3c9x_A 226 LLDDNVVDAYYANVQSAQYDNQQEGVVFDCD-----EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSSSGI 300 (329)
T ss_dssp EECHHHHHHHHTTCTTCEEETTTTEEEEETT-----CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEECTTT
T ss_pred eCCHHHHHHHHHhCCCcEEcCCCCEEEEECC-----CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcCCCC
Confidence 0 11223455 3789999999999999999999987632 368998 77654 5
Q ss_pred CcceechhhhceeEEEEECCCCEEEEeeC
Q 019179 312 SVPIYGNIMQTNFLVGYDIEQQTVSFKPT 340 (345)
Q Consensus 312 ~~~ilG~~fl~~~y~vfD~~~~riGfA~~ 340 (345)
+.||||+.|||++|+|||++++|||||+.
T Consensus 301 ~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 301 GINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp TSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 78999999999999999999999999984
No 7
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.1e-43 Score=329.40 Aligned_cols=231 Identities=24% Similarity=0.364 Sum_probs=187.3
Q ss_pred cccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCC
Q 019179 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (345)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~ 159 (345)
+.......+..|+++|.||||+|++.|+|||||+++||+|.+|. .| ++.++.|||++|+||+...
T Consensus 6 v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~c-~~~~~~y~~~~SsT~~~~~------------ 70 (325)
T 2apr_A 6 VPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT--NC-GSGQTKYDPNQSSTYQADG------------ 70 (325)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS--SC-CTTSCCBCGGGCTTCEEEE------------
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc--hH-hcCCCCCCcccCCCeeeCC------------
Confidence 34455778899999999999999999999999999999999998 67 6788999999999999876
Q ss_pred CCCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCC-CCCCceeeecCCCCCh-------h
Q 019179 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF-NSKTTGIVGLGGGDIS-------L 231 (345)
Q Consensus 160 ~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGLg~~~~s-------~ 231 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++...+.| ....+||||||++.++ +
T Consensus 71 ------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~ 139 (325)
T 2apr_A 71 ------RTWSISYGDGSSASGILAKDNVNLGGL-----LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTP 139 (325)
T ss_dssp ------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCH
T ss_pred ------CEEEEEECCCCCEEEEEEEEEEEECCE-----EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCH
Confidence 999999999997779999999999986 89999999999877655 4558999999997654 4
Q ss_pred HHHhhhh------------------------cCCe---e---------e----------------c---CCCCCcEEEcC
Q 019179 232 ISQMRTT------------------------IAGN---Q---------R----------------L---GVSTPDIVIDS 256 (345)
Q Consensus 232 ~~ql~~~------------------------~g~~---k---------~----------------~---~~~~~~~iiDs 256 (345)
+.+|.++ +|+. + . . ......+||||
T Consensus 140 ~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~~~~~~~~~iiDS 219 (325)
T 2apr_A 140 MDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDT 219 (325)
T ss_dssp HHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTEEEECCEEEEECT
T ss_pred HHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCEecCCCceEEEec
Confidence 4454322 1221 0 0 0 01235789999
Q ss_pred C------------------------CccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecCC
Q 019179 257 D------------------------PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGITN 311 (345)
Q Consensus 257 ~------------------------~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~~ 311 (345)
+ ...+..+|+.. .+|+|+|+|+|.+++||+++|+++.. +..|++ |...+.
T Consensus 220 GTs~~~lP~~~~~~~~~~~~~~~~~~g~~~~~C~~~----~~p~i~f~f~g~~~~ip~~~~~~~~~-~~~C~~~i~~~~~ 294 (325)
T 2apr_A 220 GTTLLILPNNIAASVARAYGASDNGDGTYTISCDTS----AFKPLVFSINGASFQVSPDSLVFEEF-QGQCIAGFGYGNW 294 (325)
T ss_dssp TCSSEEEEHHHHHHHHHHHTCEECSSSCEEECSCGG----GCCCEEEEETTEEEEECGGGGEEEEE-TTEEEESEEEESS
T ss_pred CCccEECCHHHHHHHHHHHhcccCCCCeEEEECCCC----CCCcEEEEECCEEEEECHHHEEEcCC-CCeEEEEEEcCCC
Confidence 1 01233467641 48999999999899999999998764 458998 666546
Q ss_pred CcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 312 SVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 312 ~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
+.||||+.|||++|+|||++++|||||+++
T Consensus 295 ~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 295 GFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp SSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 789999999999999999999999999974
No 8
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.4e-43 Score=333.76 Aligned_cols=233 Identities=24% Similarity=0.366 Sum_probs=189.1
Q ss_pred ccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC-CCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCC
Q 019179 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (345)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~-~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c 161 (345)
+.++.+..|+++|.||||+|+++|+|||||+++||+|..|. ...| ..++.|||++|+||+..+
T Consensus 12 l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~-------------- 75 (361)
T 1mpp_A 12 LYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGC--VGKRFFDPSSSSTFKETD-------------- 75 (361)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTC--CSSCCBCGGGCTTCEEEE--------------
T ss_pred eecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccC--CCCCcCCCccCCceEecC--------------
Confidence 34567899999999999999999999999999999999997 5678 457899999999999987
Q ss_pred CCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCC------CC-CCCCceeeecCCCCChhH--
Q 019179 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG------LF-NSKTTGIVGLGGGDISLI-- 232 (345)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~------~~-~~~~~GilGLg~~~~s~~-- 232 (345)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+ .| ....+||||||++.++..
T Consensus 76 ----~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 145 (361)
T 1mpp_A 76 ----YNLNITYGTGGA-NGIYFRDSITVGGA-----TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEA 145 (361)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHH
T ss_pred ----CeEEEEECCceE-EEEEEEEEEEECCE-----EEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccc
Confidence 999999999995 59999999999986 899999999998765 34 567899999999866543
Q ss_pred ----------HHhhhh----------------------cCCe---------------e------e----------cC---
Q 019179 233 ----------SQMRTT----------------------IAGN---------------Q------R----------LG--- 246 (345)
Q Consensus 233 ----------~ql~~~----------------------~g~~---------------k------~----------~~--- 246 (345)
.+|.++ +|+. + . ..
T Consensus 146 ~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~ 225 (361)
T 1mpp_A 146 EYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDA 225 (361)
T ss_dssp HHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEE
T ss_pred cccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeee
Confidence 344321 1221 0 0 00
Q ss_pred --CCCCcEE-EcC-------------------CC------ccccccccccccCCCc-CeEEEEE--c-----CcEEEeCC
Q 019179 247 --VSTPDIV-IDS-------------------DP------TGSLELCYSFNSLSQV-PEVTIHF--R-----GADVKLSR 290 (345)
Q Consensus 247 --~~~~~~i-iDs-------------------~~------~~~~~~C~~~~~~~~~-P~i~f~f--~-----g~~~~l~~ 290 (345)
.....+| ||| .. ..+..+|+... .+ |+|+|+| + |++|+||+
T Consensus 226 ~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~~~---~~~p~i~f~f~~g~~~~~g~~~~i~~ 302 (361)
T 1mpp_A 226 VSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATESQQGYTVPCSKYQ---DSKTTFSLVLQKSGSSSDTIDVSVPI 302 (361)
T ss_dssp EEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEEETTEEEEEHHHHT---TCCCEEEEEEECTTCSSCEEEEEEEG
T ss_pred ccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccCCCCcEEEECCCcc---cCCCcEEEEEEcCCcCCCCeEEEECH
Confidence 1235689 999 11 12345787654 67 9999999 7 89999999
Q ss_pred cceEEEeC-CCeEEEE-EEecCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 291 SNFFVKVS-EDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 291 ~~y~~~~~-~~~~C~~-~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
++|+++.. ++..|+. |.+...+.||||++|||++|+|||++++|||||+++|+.
T Consensus 303 ~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 303 SKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp GGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred HHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 99999875 3468985 877545789999999999999999999999999999985
No 9
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.4e-43 Score=338.58 Aligned_cols=242 Identities=23% Similarity=0.399 Sum_probs=193.3
Q ss_pred ccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCC-----
Q 019179 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK----- 159 (345)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~----- 159 (345)
+..+++|+++|.||||||+|.|+|||||+++||+|.+| .+|+||+.+.|.++.|......
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c---------------~~Sst~~~v~C~s~~C~~~~~~~~~~c 80 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN---------------YVSSTYRPVRCRTSQCSLSGSIACGDC 80 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS---------------CCCTTCEECBTTSHHHHHTTCCEEECC
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC---------------CCCCCcCccCCCcccccccccCCCccc
Confidence 45688999999999999999999999999999999854 2699999999999999866432
Q ss_pred ------CCCCCCceeEEEe-CCCCeEeeeEEEEEEEecCCCCC----ccccCCeEEEeEEecCC-CCCCCCceeeecCCC
Q 019179 160 ------SCSGVNCQYSVSY-GDGSFSNGNLATETVTLGSTTGQ----AVALPGITFGCGTNNGG-LFNSKTTGIVGLGGG 227 (345)
Q Consensus 160 ------~c~~~~~~~~~~Y-~~gs~~~G~~~~D~v~~~~~~~~----~~~~~~~~fg~~~~~~~-~~~~~~~GilGLg~~ 227 (345)
.|.++.|.|.+.| ++|+.+.|++++|+|+|+..+|. .+.++++.|||++.... .+...++||||||++
T Consensus 81 ~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~ 160 (413)
T 3vla_A 81 FNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRT 160 (413)
T ss_dssp SSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSS
T ss_pred ccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCC
Confidence 3444579999999 58888889999999999865443 36889999999998632 123678999999999
Q ss_pred CChhHHHhhhh----------------------cCC---------------e-------e--------------e-----
Q 019179 228 DISLISQMRTT----------------------IAG---------------N-------Q--------------R----- 244 (345)
Q Consensus 228 ~~s~~~ql~~~----------------------~g~---------------~-------k--------------~----- 244 (345)
.+|+++||..+ ||+ . + .
T Consensus 161 ~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~ 240 (413)
T 3vla_A 161 RIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240 (413)
T ss_dssp SSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred CcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence 99999997642 121 0 0 0
Q ss_pred -----------cC---------CCCCcEEEcC-----------------------C--------CccccccccccccC--
Q 019179 245 -----------LG---------VSTPDIVIDS-----------------------D--------PTGSLELCYSFNSL-- 271 (345)
Q Consensus 245 -----------~~---------~~~~~~iiDs-----------------------~--------~~~~~~~C~~~~~~-- 271 (345)
.. .+.+++|||| . ....++.||..++.
T Consensus 241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 320 (413)
T 3vla_A 241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILS 320 (413)
T ss_dssp CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCE
T ss_pred EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCccc
Confidence 00 0236799999 1 11235789987533
Q ss_pred ----CCcCeEEEEEcC--cEEEeCCcceEEEeCCCeEEEEEEecC---CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 272 ----SQVPEVTIHFRG--ADVKLSRSNFFVKVSEDIVCSVFKGIT---NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 272 ----~~~P~i~f~f~g--~~~~l~~~~y~~~~~~~~~C~~~~~~~---~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
..+|+|+|+|+| ++|+|++++|+++..++..|++|...+ ...||||+.|||++|+|||++++|||||++.
T Consensus 321 ~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~ 399 (413)
T 3vla_A 321 TRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTL 399 (413)
T ss_dssp ETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEG
T ss_pred cccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEec
Confidence 269999999998 899999999999876677899977654 2689999999999999999999999999954
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.5e-43 Score=328.51 Aligned_cols=226 Identities=28% Similarity=0.487 Sum_probs=185.1
Q ss_pred ccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCC
Q 019179 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (345)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (345)
.+.+..|+++|.||||+|+++|+|||||+++||+|..|....| ..++.|||++|+|++..+
T Consensus 8 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~----------------- 68 (329)
T 1htr_B 8 AYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQAC--TSHSRFNPSESSTYSTNG----------------- 68 (329)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE-----------------
T ss_pred EEcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCccc--CCCCcCCCccCCCeEECC-----------------
Confidence 3778899999999999999999999999999999999974457 467899999999999987
Q ss_pred CceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCC-C-CCCCceeeecCCCCCh------hHHHhh
Q 019179 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQMR 236 (345)
Q Consensus 165 ~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~ql~ 236 (345)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+. | ....+||||||++.++ ++.+|.
T Consensus 69 -~~~~i~Yg~gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 141 (329)
T 1htr_B 69 -QTFSLQYGSGSL-TGFFGYDTLTVQSI-----QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMV 141 (329)
T ss_dssp -EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHH
T ss_pred -cEEEEEeCCCCe-EEEEEeeeEEEcce-----EECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHH
Confidence 999999999987 59999999999986 8999999999987663 4 5678999999998765 344443
Q ss_pred hh------------------------cCCe-------------------------------ee-c-CCCCCcEEEcC---
Q 019179 237 TT------------------------IAGN-------------------------------QR-L-GVSTPDIVIDS--- 256 (345)
Q Consensus 237 ~~------------------------~g~~-------------------------------k~-~-~~~~~~~iiDs--- 256 (345)
++ +|+. +. . ......+||||
T Consensus 142 ~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt 221 (329)
T 1htr_B 142 QEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTS 221 (329)
T ss_dssp HTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCC
T ss_pred hcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCc
Confidence 21 1221 00 0 12345799999
Q ss_pred ---------------------CCccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecC----
Q 019179 257 ---------------------DPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT---- 310 (345)
Q Consensus 257 ---------------------~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~---- 310 (345)
....+..+|+... .+|+|+|+|+|++|+||+++|+++.. + .|+. |.+.+
T Consensus 222 ~~~lp~~~~~~l~~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~-g-~C~~~~~~~~~~~~ 296 (329)
T 1htr_B 222 LLTVPQQYMSALLQATGAQEDEYGQFLVNCNSIQ---NLPSLTFIINGVEFPLPPSSYILSNN-G-YCTVGVEPTYLSSQ 296 (329)
T ss_dssp SEEEEGGGHHHHHHHHTCEECTTSCEEECGGGGG---GSCCEEEEETTEEEEECHHHHEEECS-S-CEEESEEEECCCCT
T ss_pred cEECCHHHHHHHHHHhCCeecCCCeEEEeCCCcc---cCCcEEEEECCEEEEECHHHhcccCC-C-EEEEEEEECCCCCC
Confidence 1112345788654 78999999999999999999999876 3 8996 77642
Q ss_pred -CC-cceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 311 -NS-VPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 311 -~~-~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
.+ .||||+.|||++|+|||++++|||||+++
T Consensus 297 ~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 297 NGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp TSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 34 89999999999999999999999999975
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-43 Score=327.81 Aligned_cols=227 Identities=25% Similarity=0.462 Sum_probs=184.5
Q ss_pred cccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCC
Q 019179 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (345)
Q Consensus 84 ~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~ 163 (345)
.++.+..|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+|++..+
T Consensus 7 ~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~---------------- 68 (324)
T 1am5_A 7 KNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQAC--SNHNKFKPRQSSTYVETG---------------- 68 (324)
T ss_dssp EEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHH--HTSCCBCGGGCTTCEEEE----------------
T ss_pred ecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--cCCCcCCCccCCCeEeCC----------------
Confidence 34678999999999999999999999999999999999974457 467899999999999987
Q ss_pred CCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCC-C-CCCCceeeecCCCCCh------hHHHh
Q 019179 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQM 235 (345)
Q Consensus 164 ~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~ql 235 (345)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+. | ....+||||||++.++ ++.+|
T Consensus 69 --~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (324)
T 1am5_A 69 --KTVDLTYGTGGM-RGILGQDTVSVGGG-----SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNM 140 (324)
T ss_dssp --EEEEEECSSCEE-EEEEEEEEEESSSS-----CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHH
T ss_pred --cEEEEEECCCCe-EEEEEECceeECCc-----EEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhH
Confidence 999999999987 59999999999986 8999999999988663 4 5678999999998765 34444
Q ss_pred hhh-----------------------cCCe---------------------------eec----CCCCCcEEEcC-----
Q 019179 236 RTT-----------------------IAGN---------------------------QRL----GVSTPDIVIDS----- 256 (345)
Q Consensus 236 ~~~-----------------------~g~~---------------------------k~~----~~~~~~~iiDs----- 256 (345)
.++ +|+. +.. ......+||||
T Consensus 141 ~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 220 (324)
T 1am5_A 141 GSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAACEGCQAIVDTGTSKI 220 (324)
T ss_dssp HHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCCCCEEEEECTTCSSE
T ss_pred HhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeeccCceEEEecCCccE
Confidence 321 2221 000 11126799999
Q ss_pred --------------CC----ccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecC-----CC
Q 019179 257 --------------DP----TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-----NS 312 (345)
Q Consensus 257 --------------~~----~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~-----~~ 312 (345)
.. ..+..+|+... .+|+|+|+|+|++|+||+++|+++. +..|+. |.+.+ .+
T Consensus 221 ~lp~~~~~~l~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~ 295 (324)
T 1am5_A 221 VAPVSALANIMKDIGASENQGEMMGNCASVQ---SLPDITFTINGVKQPLPPSAYIEGD--QAFCTSGLGSSGVPSNTSE 295 (324)
T ss_dssp EECTTTHHHHHHHHTCEECCCCEECCTTSSS---SSCCEEEEETTEEEEECHHHHEEES--SSCEEECEEECCSCCSSSC
T ss_pred ECCHHHHHHHHHHhCCcccCCcEEEeCCCcc---cCCcEEEEECCEEEEECHHHhcccC--CCeEEEEEEECccCCCCCC
Confidence 11 12345676543 7999999999999999999999987 457996 87642 46
Q ss_pred cceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 313 VPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 313 ~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
.||||+.|||++|+|||++++|||||+++
T Consensus 296 ~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 296 LWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 89999999999999999999999999975
No 12
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.4e-43 Score=329.60 Aligned_cols=226 Identities=21% Similarity=0.338 Sum_probs=181.3
Q ss_pred ccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCC
Q 019179 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (345)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (345)
...+..|+++|.||||+|+++|+|||||+++||+|.+|. .|.+ .++.|||++|+||+.+.|
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~-~~~~y~~~~SsT~~~~~~---------------- 71 (329)
T 1oew_A 11 DSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT--ASEV-XQTIYTPSKSTTAKLLSG---------------- 71 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--GGGC--CCCBCGGGCTTCEEEEE----------------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC--cccc-ccCccCCccCccceecCC----------------
Confidence 457889999999999999999999999999999999998 6755 788999999999998631
Q ss_pred CceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCC--CCCCceeeecCCCCCh---------hHH
Q 019179 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LIS 233 (345)
Q Consensus 165 ~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~~ 233 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++...+.+ ....+||||||++.++ ++.
T Consensus 72 -~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~ 145 (329)
T 1oew_A 72 -ATWSISYGDGSSSSGDVYTDTVSVGGL-----TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFD 145 (329)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHH
Confidence 899999999997779999999999986 89999999999876644 3678999999997654 344
Q ss_pred Hhhhh-------------------cCCe----------------------------eecC----CCCCcEEEcCC-----
Q 019179 234 QMRTT-------------------IAGN----------------------------QRLG----VSTPDIVIDSD----- 257 (345)
Q Consensus 234 ql~~~-------------------~g~~----------------------------k~~~----~~~~~~iiDs~----- 257 (345)
+|.++ +|+. +... .....+||||+
T Consensus 146 ~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~ 225 (329)
T 1oew_A 146 NAKASLDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLY 225 (329)
T ss_dssp HHTTTSSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEE
T ss_pred HHHHhccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEE
Confidence 44332 2221 0011 12346899990
Q ss_pred -----------C----------ccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeC--CCeEEEE-EEecC-CC
Q 019179 258 -----------P----------TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKGIT-NS 312 (345)
Q Consensus 258 -----------~----------~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~--~~~~C~~-~~~~~-~~ 312 (345)
. ..+..+|+ ..+|+|+|+|+|++|+||+++|+++.. +...|++ |.+.+ .+
T Consensus 226 lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~-----~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~ 300 (329)
T 1oew_A 226 LPATVVSAYWAQVSGAKSSSSVGGYVFPCS-----ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIG 300 (329)
T ss_dssp ECHHHHHHHHTTSTTCEEETTTTEEEEETT-----CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEESTTTS
T ss_pred CCHHHHHHHHHhCCCcEEcCCCCEEEEECC-----CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCCCCC
Confidence 0 11223455 378999999999999999999998763 2468998 77654 57
Q ss_pred cceechhhhceeEEEEEC-CCCEEEEeeC
Q 019179 313 VPIYGNIMQTNFLVGYDI-EQQTVSFKPT 340 (345)
Q Consensus 313 ~~ilG~~fl~~~y~vfD~-~~~riGfA~~ 340 (345)
.||||+.|||++|+|||+ +++|||||+.
T Consensus 301 ~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 301 INIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 899999999999999999 9999999984
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=4.4e-43 Score=327.83 Aligned_cols=228 Identities=24% Similarity=0.449 Sum_probs=182.2
Q ss_pred ccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCC
Q 019179 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (345)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 162 (345)
+.++.+..|+++|.||||+|+++|+|||||+++||+|.+|....| ..++.|||++|+||+...
T Consensus 7 l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~--------------- 69 (329)
T 1dpj_A 7 LTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLAC--FLHSKYDHEASSSYKANG--------------- 69 (329)
T ss_dssp CEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE---------------
T ss_pred eeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCccc--CCcCcCCcccCcCeEECC---------------
Confidence 345678899999999999999999999999999999999983347 467899999999999877
Q ss_pred CCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCC-CC-CCCCceeeecCCCCChh------HHH
Q 019179 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDISL------ISQ 234 (345)
Q Consensus 163 ~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s~------~~q 234 (345)
|.|.+.|++|+ +.|.+++|+|+|++. +++++.|||++...+ .| ....+||||||++.+++ +.+
T Consensus 70 ---~~~~i~Yg~Gs-~~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 140 (329)
T 1dpj_A 70 ---TEFAIQYGTGS-LEGYISQDTLSIGDL-----TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYN 140 (329)
T ss_dssp ---EEEEEEETTEE-EEEEEEEEEEEETTE-----EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred ---cEEEEEECCce-EEEEEEEEEEEECCe-----EECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHH
Confidence 99999999995 459999999999986 899999999998765 34 46789999999987653 222
Q ss_pred hhhh--------------------------cCCe-------------------------------eecCCCCCcEEEcC-
Q 019179 235 MRTT--------------------------IAGN-------------------------------QRLGVSTPDIVIDS- 256 (345)
Q Consensus 235 l~~~--------------------------~g~~-------------------------------k~~~~~~~~~iiDs- 256 (345)
|.++ +|+. +........+||||
T Consensus 141 l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSG 220 (329)
T 1dpj_A 141 AIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTG 220 (329)
T ss_dssp HHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEECSSCEEEECTT
T ss_pred HHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEecCCCccEEeeCC
Confidence 2211 1221 00112457899999
Q ss_pred ------------------CC-----ccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecC--
Q 019179 257 ------------------DP-----TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-- 310 (345)
Q Consensus 257 ------------------~~-----~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~-- 310 (345)
.. ..+..+|.... .+|+|+|+|+|.+|+||+++|+++.. ..|++ |.+.+
T Consensus 221 Tt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~--~~C~~~~~~~~~~ 295 (329)
T 1dpj_A 221 TSLITLPSGLAEMINAEIGAKKGWTGQYTLDCNTRD---NLPDLIFNFNGYNFTIGPYDYTLEVS--GSCISAITPMDFP 295 (329)
T ss_dssp CSCEEECHHHHHHHHHHHTCEECTTSSEEECGGGGG---GCCCEEEEETTEEEEECTTTSEEEET--TEEEECEEECCCC
T ss_pred CCcEECCHHHHHHHHHHhCCccCCCCeEEEECCCCC---cCCcEEEEECCEEEEECHHHhEecCC--CEEEEEEEecccC
Confidence 11 11223565443 78999999999999999999999875 47996 77642
Q ss_pred ---CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 311 ---NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 311 ---~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
.+.||||+.|||++|+|||++++|||||+++
T Consensus 296 ~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 296 EPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 4689999999999999999999999999975
No 14
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=6.5e-43 Score=337.93 Aligned_cols=228 Identities=21% Similarity=0.368 Sum_probs=184.7
Q ss_pred ccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCC
Q 019179 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (345)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 162 (345)
..++.+..|+++|.||||||++.|++||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 132 L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C--~~~~~ydps~SsT~~~~~--------------- 194 (453)
T 2bju_A 132 LVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGC--LTKHLYDSSKSRTYEKDG--------------- 194 (453)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTG--GGSCCBCGGGCTTCEEEE---------------
T ss_pred eEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCcccc--CCCCcCCCccCCceeECC---------------
Confidence 335678999999999999999999999999999999999985677 567999999999999987
Q ss_pred CCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecC--CC-C-CCCCceeeecCCCCCh------hH
Q 019179 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNG--GL-F-NSKTTGIVGLGGGDIS------LI 232 (345)
Q Consensus 163 ~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~--~~-~-~~~~~GilGLg~~~~s------~~ 232 (345)
|.|.+.|++|+. .|.+++|+|+|++. +++ +.|||++... +. | ....+||||||++.++ ++
T Consensus 195 ---~~~~i~YgdGs~-~G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~ 264 (453)
T 2bju_A 195 ---TKVEMNYVSGTV-SGFFSKDLVTVGNL-----SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIV 264 (453)
T ss_dssp ---EEEEEECSSSEE-EEEEEEEEEEETTE-----EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHH
T ss_pred ---cEEEEEcCCCCe-EEEEEEEEEEEeCc-----EEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHH
Confidence 999999999995 59999999999986 888 9999999986 53 3 4678999999997655 33
Q ss_pred HHhhhh-----------------------cCCe---e---------e----------c-CC-----CCCcEEEcCC----
Q 019179 233 SQMRTT-----------------------IAGN---Q---------R----------L-GV-----STPDIVIDSD---- 257 (345)
Q Consensus 233 ~ql~~~-----------------------~g~~---k---------~----------~-~~-----~~~~~iiDs~---- 257 (345)
.+|.++ +|+. + . . .. ....+||||+
T Consensus 265 ~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~I~Vgg~~~~~~~aIiDSGTsl~ 344 (453)
T 2bju_A 265 VELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLDAHVGNIMLEKANCIVDSGTSAI 344 (453)
T ss_dssp HHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEEEEETTEEEEEEEEEECTTCCSE
T ss_pred HHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEEEEECcEEeccccEEEcCCCCeE
Confidence 444322 2221 0 0 0 00 1246899990
Q ss_pred --------------------Cc-cccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeC--CCeEEEE-EEecC--C
Q 019179 258 --------------------PT-GSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKGIT--N 311 (345)
Q Consensus 258 --------------------~~-~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~--~~~~C~~-~~~~~--~ 311 (345)
.. .+..+|+. ..+|+|+|+|+|++|+|||++|+++.. ++..|++ |.+.+ .
T Consensus 345 ~lP~~~~~~l~~~i~~~~~~~g~~~~v~C~~----~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~ 420 (453)
T 2bju_A 345 TVPTDFLNKMLQNLDVIKVPFLPFYVTLCNN----SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPV 420 (453)
T ss_dssp EECHHHHHHHTTTSSCEECTTSSCEEEETTC----TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECEEECCCSS
T ss_pred ecCHHHHHHHHHHhCCcccCCCceEEEecCC----CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEEEEEeCCCCC
Confidence 11 23456765 279999999999999999999999875 3458986 87765 3
Q ss_pred CcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 312 SVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 312 ~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
+.||||++|||++|+|||++++|||||+++
T Consensus 421 ~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 421 PTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 589999999999999999999999999975
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=8.7e-43 Score=326.51 Aligned_cols=226 Identities=23% Similarity=0.423 Sum_probs=181.7
Q ss_pred ccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCC--CCCC-------CCCCCCCCCCCCCCCCCcceecCCCCc
Q 019179 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCE--PCPP-------SQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (345)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~--~C~~-------~~C~~~~~~~y~~~~SsT~~~~~c~~~ 151 (345)
..++...+..|+++|.||||+|+++|+|||||+++||+|. +|.. ..| +.++.|||++|+||+...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (334)
T 1j71_A 4 PTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFC--KQEGTFDPSSSSSAQNLN---- 77 (334)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GSSCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccc--cCCCcCCcccCCCcccCC----
Confidence 3455566889999999999999999999999999999876 6752 246 567899999999999987
Q ss_pred cccCCCCCCCCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCCCCCCceeeecCCCCC--
Q 019179 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (345)
Q Consensus 152 ~C~~~~~~~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (334)
T 1j71_A 78 --------------QDFSIEYGDLTSSQGSFYKDTVGFGGI-----SIKNQQFADVTTTS-----VDQGIMGIGFTADEA 133 (334)
T ss_dssp --------------EEEEEEBTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGSS
T ss_pred --------------CceEEEECCCCEEEEEEEEEEEEECCE-----EEccEEEEEEEecC-----CCccEEEEcCCcccC
Confidence 999999999998779999999999986 89999999999863 4689999999765
Q ss_pred ------hhHHHhhhh-----------------------cCCe---e------------------------ecC---CCCC
Q 019179 230 ------SLISQMRTT-----------------------IAGN---Q------------------------RLG---VSTP 250 (345)
Q Consensus 230 ------s~~~ql~~~-----------------------~g~~---k------------------------~~~---~~~~ 250 (345)
+++.+|.++ +|+. | ... ....
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~ 213 (334)
T 1j71_A 134 GYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVSTNA 213 (334)
T ss_dssp TTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEEEE
T ss_pred ccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccCCc
Confidence 456666432 1221 0 000 1124
Q ss_pred cEEEcC-------------------CC------cccc-ccccccccCCCcCeEEEEE-cCcEEEeCCcceEEEeCCCeEE
Q 019179 251 DIVIDS-------------------DP------TGSL-ELCYSFNSLSQVPEVTIHF-RGADVKLSRSNFFVKVSEDIVC 303 (345)
Q Consensus 251 ~~iiDs-------------------~~------~~~~-~~C~~~~~~~~~P~i~f~f-~g~~~~l~~~~y~~~~~~~~~C 303 (345)
.+|||| .. ..+. .+|+ .+|.|+|+| +|++|+||+++|+++..++..|
T Consensus 214 ~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~C~------~~p~i~f~f~~g~~~~i~~~~y~~~~~~~~~C 287 (334)
T 1j71_A 214 DVVLDSGTTITYFSQSTADKFARIVGATWDSRNEIYRLPSCD------LSGDAVFNFDQGVKITVPLSELILKDSDSSIC 287 (334)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHHTCEEETTTTEEECSSSC------CCSEEEEEESTTCEEEEEGGGGEEECSSSSCE
T ss_pred cEEEeCCCCcEecCHHHHHHHHHHcCCcccCCCceEEEEcCC------CCCceEEEEcCCcEEEECHHHheeecCCCCee
Confidence 689999 10 1223 5665 479999999 5799999999999987554469
Q ss_pred EE-EEecCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 304 SV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 304 ~~-~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
++ |.+. +.||||+.|||++|+|||++++|||||+++|++
T Consensus 288 ~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 288 YFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp EESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred EEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 98 6664 579999999999999999999999999999974
No 16
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=6e-43 Score=328.44 Aligned_cols=231 Identities=23% Similarity=0.408 Sum_probs=186.3
Q ss_pred ccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCCCcceecCCCCccccCCCC
Q 019179 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP--PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ 158 (345)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~--~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~ 158 (345)
.++.++.+.+|+++|.||||+|+++|++||||+++||+|..|. ...| ..++.|||++|+|++...
T Consensus 10 ~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C--~~~~~y~~~~SsT~~~~~----------- 76 (341)
T 3k1w_A 10 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG----------- 76 (341)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHH--HTSCCBCGGGCTTCEEEE-----------
T ss_pred ccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcc--cCCCCCCCCcCcCeeECC-----------
Confidence 4445677999999999999999999999999999999999997 3357 467899999999999887
Q ss_pred CCCCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCC-C-CCCCceeeecCCCCCh------
Q 019179 159 KSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------ 230 (345)
Q Consensus 159 ~~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------ 230 (345)
|.|.+.|++|+ +.|.+++|+|+|++. ++ ++.|||++...+. | ....+||||||++..+
T Consensus 77 -------~~~~i~Yg~gs-~~G~~~~D~v~ig~~-----~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 142 (341)
T 3k1w_A 77 -------TELTLRYSTGT-VSGFLSQDIITVGGI-----TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 142 (341)
T ss_dssp -------EEEEEEETTEE-EEEEEEEEEEEETTE-----EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------CEEEEEECCcE-EEEEEEEEEEEECCc-----ee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCC
Confidence 99999999998 559999999999986 88 9999999988764 4 5678999999998765
Q ss_pred hHHHhhhh---------------------------cCCe-------------------------------e-ecCCCCCc
Q 019179 231 LISQMRTT---------------------------IAGN-------------------------------Q-RLGVSTPD 251 (345)
Q Consensus 231 ~~~ql~~~---------------------------~g~~-------------------------------k-~~~~~~~~ 251 (345)
++.+|.++ +|+. + ........
T Consensus 143 ~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 222 (341)
T 3k1w_A 143 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCL 222 (341)
T ss_dssp HHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEECTTCEE
T ss_pred HHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEeecCCCCE
Confidence 34444321 1221 0 01123457
Q ss_pred EEEcC-----------------------CCccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeC--CCeEEEE-
Q 019179 252 IVIDS-----------------------DPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV- 305 (345)
Q Consensus 252 ~iiDs-----------------------~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~--~~~~C~~- 305 (345)
+|||| ...++..+|.... .+|+|+|+|+|++|+||+++|+++.. ++..|+.
T Consensus 223 ~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~g~~~~C~~~~---~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~~ 299 (341)
T 3k1w_A 223 ALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGP---TLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLA 299 (341)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGGG---GCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEBS
T ss_pred EEEECCCChhcCCHHHHHHHHHHcCCeecCCCeEEeCCCCC---cCCcEEEEECCEEEEECHHHheeEccCCCCCeEEeE
Confidence 99999 1112445677544 78999999999999999999998754 2568997
Q ss_pred EEec-----CCCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 306 FKGI-----TNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 306 ~~~~-----~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
|... ....||||++|||++|+|||++++|||||+++
T Consensus 300 i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 300 IHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 7763 25689999999999999999999999999975
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3.4e-42 Score=323.14 Aligned_cols=225 Identities=22% Similarity=0.412 Sum_probs=182.2
Q ss_pred ccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEe-----CCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccC
Q 019179 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQ-----CEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCAS 155 (345)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~-----~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~ 155 (345)
..++...++.|+++|.||||+|++.|+|||||+++||+ |.+|. .| ..++.|||++|+||+..+
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~--~C--~~~~~y~~~~SsT~~~~~-------- 71 (339)
T 3fv3_A 4 SLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV--DC--KSSGTFTPSSSSSYKNLG-------- 71 (339)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC--CT--TTTCCBCGGGCTTCEEEE--------
T ss_pred eeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC--CC--CCCCcCCCccCcceeeCC--------
Confidence 45667778899999999999999999999999999998 55444 78 467899999999999987
Q ss_pred CCCCCCCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCCCCCCceeeecCCCCCh-----
Q 019179 156 LNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDIS----- 230 (345)
Q Consensus 156 ~~~~~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~s----- 230 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++...+ .+||||||++..+
T Consensus 72 ----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~-----~~GilGLg~~~~~~~~~~ 131 (339)
T 3fv3_A 72 ----------AAFTIRYGDGSTSQGTWGKDTVTINGV-----SITGQQIADVTQTSV-----DQGILGIGYTSNEAVYDT 131 (339)
T ss_dssp ----------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEESS-----SSCEEECSCGGGCCCBCT
T ss_pred ----------ceEEEEECCCceEEEEEEEEEEEECCE-----EECceEEEEEEecCC-----CceeEEecCccccccccc
Confidence 999999999988889999999999986 899999999998753 5899999997653
Q ss_pred -----------hHHHhhhh-----------------------cCCe---e------------------------ecC---
Q 019179 231 -----------LISQMRTT-----------------------IAGN---Q------------------------RLG--- 246 (345)
Q Consensus 231 -----------~~~ql~~~-----------------------~g~~---k------------------------~~~--- 246 (345)
++.||.++ +|+. + ...
T Consensus 132 ~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~ 211 (339)
T 3fv3_A 132 SGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSF 211 (339)
T ss_dssp TSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEE
T ss_pred cccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEee
Confidence 56666432 2221 0 000
Q ss_pred CCCCcEEEcC-------------------C---------CccccccccccccCCCcCeEEEEEc-CcEEEeCCcceEEEe
Q 019179 247 VSTPDIVIDS-------------------D---------PTGSLELCYSFNSLSQVPEVTIHFR-GADVKLSRSNFFVKV 297 (345)
Q Consensus 247 ~~~~~~iiDs-------------------~---------~~~~~~~C~~~~~~~~~P~i~f~f~-g~~~~l~~~~y~~~~ 297 (345)
.....+|||| . ...+..+|+.. .+|+|+|+|+ |++|+||+++|+++.
T Consensus 212 ~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~----~~p~i~f~f~~g~~~~v~~~~~~~~~ 287 (339)
T 3fv3_A 212 SFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNTD----TSGTTVFNFGNGAKITVPNTEYVYQN 287 (339)
T ss_dssp EEEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEECTTCC----CCSEEEEEETTSCEEEEEGGGGEEEC
T ss_pred cCCccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEEecCCC----CCCcEEEEECCCCEEEECHHHheeeC
Confidence 1124689999 1 11133466642 6899999995 799999999999986
Q ss_pred CCCeEEEE-EEecCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 298 SEDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 298 ~~~~~C~~-~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
.+ ..|+. |.+ .+.||||+.|||++|+|||++++|||||+++|++
T Consensus 288 ~~-~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 288 GD-GTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp SS-SCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CC-CeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 44 46966 877 4689999999999999999999999999999974
No 18
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=6.1e-42 Score=334.15 Aligned_cols=234 Identities=26% Similarity=0.442 Sum_probs=182.1
Q ss_pred cccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC-CCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCC
Q 019179 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (345)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~-~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~ 160 (345)
++.++.+..|+++|.||||+|+|.|+|||||+++||+|..|. ...|. .++.|||++|+||+..+
T Consensus 45 ~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------------- 109 (478)
T 1qdm_A 45 ALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY--LHSRYKAGASSTYKKNG------------- 109 (478)
T ss_dssp GGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG--GSCCBCGGGCTTCBCCC-------------
T ss_pred EeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc--CCCCCCcccCCCeeeCC-------------
Confidence 334557889999999999999999999999999999999996 34684 56899999999999887
Q ss_pred CCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCC-C-CCCCceeeecCCCCChh------H
Q 019179 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDISL------I 232 (345)
Q Consensus 161 c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s~------~ 232 (345)
+.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. | ...++||||||++.++. +
T Consensus 110 -----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~ 178 (478)
T 1qdm_A 110 -----KPAAIQYGTGSI-AGYFSEDSVTVGDL-----VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVW 178 (478)
T ss_dssp -----CEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHH
T ss_pred -----cEEEEEcCCCCe-EEEEEEEEEEECCe-----EECCEEEEEEEecCCcccccccccceecccccccccCCCCcHH
Confidence 999999999985 59999999999986 8999999999987653 4 56789999999987763 2
Q ss_pred HHhhhh-------------------------cCCe---------------------------eec------CCCCCcEEE
Q 019179 233 SQMRTT-------------------------IAGN---------------------------QRL------GVSTPDIVI 254 (345)
Q Consensus 233 ~ql~~~-------------------------~g~~---------------------------k~~------~~~~~~~ii 254 (345)
.+|.++ ||+. ... ......+||
T Consensus 179 ~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~~aii 258 (478)
T 1qdm_A 179 YKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIA 258 (478)
T ss_dssp HHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTTTCEEEEE
T ss_pred HHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecCCCceEEE
Confidence 222211 2221 000 123467999
Q ss_pred cCC-------------------Cccc------------------------------------------------------
Q 019179 255 DSD-------------------PTGS------------------------------------------------------ 261 (345)
Q Consensus 255 Ds~-------------------~~~~------------------------------------------------------ 261 (345)
||+ ....
T Consensus 259 DTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~ 338 (478)
T 1qdm_A 259 DSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDD 338 (478)
T ss_dssp CSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC------------------
T ss_pred cCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccccccccccccc
Confidence 991 0000
Q ss_pred -----------------------------------------ccccccc---------ccC--CCcCeEEEEEcCcEEEeC
Q 019179 262 -----------------------------------------LELCYSF---------NSL--SQVPEVTIHFRGADVKLS 289 (345)
Q Consensus 262 -----------------------------------------~~~C~~~---------~~~--~~~P~i~f~f~g~~~~l~ 289 (345)
...|+.. +|. ..+|+|+|+|+|++|+|+
T Consensus 339 ~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~gg~~~~l~ 418 (478)
T 1qdm_A 339 EPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALK 418 (478)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEEEEETTEEEEEC
T ss_pred cccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEEEEECCEEEEEC
Confidence 0123222 222 268999999999999999
Q ss_pred CcceEEEeCC--CeEEEE-EEecC-----CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 290 RSNFFVKVSE--DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 290 ~~~y~~~~~~--~~~C~~-~~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
|++|+++... +..|++ |...+ +..||||++|||++|+|||++++|||||+++
T Consensus 419 p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 419 PEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp HHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 9999998754 357998 76532 4689999999999999999999999999974
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.5e-42 Score=326.98 Aligned_cols=228 Identities=20% Similarity=0.398 Sum_probs=184.5
Q ss_pred cccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCC
Q 019179 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (345)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c 161 (345)
++.++.+..|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 55 pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 118 (375)
T 1miq_A 55 ELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGC--SIKNLYDSSKSKSYEKDG-------------- 118 (375)
T ss_dssp CGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGG--GGSCCBCGGGCTTCEEEE--------------
T ss_pred EcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccc--cCCCcCCCccCCceEECC--------------
Confidence 3334578899999999999999999999999999999999975567 567999999999999987
Q ss_pred CCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEe----cCCCC-CCCCceeeecCCCCCh------
Q 019179 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTN----NGGLF-NSKTTGIVGLGGGDIS------ 230 (345)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGLg~~~~s------ 230 (345)
|.|.+.|++|+. .|.+++|+|+|++. ++++ .|||++. .. .| ....+||||||++.++
T Consensus 119 ----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~ 186 (375)
T 1miq_A 119 ----TKVDITYGSGTV-KGFFSKDLVTLGHL-----SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDP 186 (375)
T ss_dssp ----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCC
T ss_pred ----cEEEEEeCCCeE-EEEEEEEEEEEcCc-----eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCC
Confidence 999999999995 59999999999986 8899 9999998 54 44 4678999999998765
Q ss_pred hHHHhhhh-----------------------cCCe---e---------ecC------------C----CCCcEEEcC---
Q 019179 231 LISQMRTT-----------------------IAGN---Q---------RLG------------V----STPDIVIDS--- 256 (345)
Q Consensus 231 ~~~ql~~~-----------------------~g~~---k---------~~~------------~----~~~~~iiDs--- 256 (345)
++.+|.++ +|+. + ... . ....+||||
T Consensus 187 ~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~i~v~g~~~~~~~aiiDSGTs 266 (375)
T 1miq_A 187 IVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTT 266 (375)
T ss_dssp HHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEEEEETTEEEEEEEEEECTTBS
T ss_pred HHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEEEEECCEEcccceEEecCCCc
Confidence 33444322 2221 0 000 0 135689999
Q ss_pred ----------------C------CccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeC--CCeEEEE-EEecC-
Q 019179 257 ----------------D------PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKGIT- 310 (345)
Q Consensus 257 ----------------~------~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~--~~~~C~~-~~~~~- 310 (345)
. ...+..+|+. . .+|+|+|+|+|++|+|||++|+++.. ++..|+. |++.+
T Consensus 267 ~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~-~---~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~ 342 (375)
T 1miq_A 267 TITAPSEFLNKFFANLNVIKVPFLPFYVTTCDN-K---EMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDI 342 (375)
T ss_dssp SEEECHHHHHHHHHHHTCEECTTSSCEEEETTC-T---TCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESEEECCS
T ss_pred cEEcCHHHHHHHHHHhCCcccCCCCeEEEECCC-C---CCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCC
Confidence 1 1123456775 2 79999999999999999999999875 3458985 88765
Q ss_pred -CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 311 -NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 311 -~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
.+.||||++|||++|+|||++++|||||+++
T Consensus 343 ~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 343 DSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp SSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 3789999999999999999999999999975
No 20
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.9e-42 Score=333.68 Aligned_cols=229 Identities=19% Similarity=0.299 Sum_probs=186.0
Q ss_pred ccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCC
Q 019179 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (345)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~ 160 (345)
.++.++.+..|+++|.||||||++.|++||||+++||+|..|....| ..++.|||++|+|++..+
T Consensus 129 ~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C--~~~~~ydps~SsT~~~~~------------- 193 (451)
T 3qvc_A 129 VELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESC--ESKNHYDSSKSKTYEKDD------------- 193 (451)
T ss_dssp CCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-------------
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCcccc--CCCCCCCCCCCcccccCC-------------
Confidence 44446678999999999999999999999999999999999975578 567999999999999987
Q ss_pred CCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEe----cCCCC-CCCCceeeecCCCCCh-----
Q 019179 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTN----NGGLF-NSKTTGIVGLGGGDIS----- 230 (345)
Q Consensus 161 c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGLg~~~~s----- 230 (345)
+.|.+.|++|+ +.|.+++|+|+|++. +++ +.|||++. .++ | ....+||||||++.++
T Consensus 194 -----~~f~i~YgdGs-~~G~~~~Dtv~igg~-----~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~ 260 (451)
T 3qvc_A 194 -----TPVKLTSKAGT-ISGIFSKDLVTIGKL-----SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSID 260 (451)
T ss_dssp -----EEEEEECSSEE-EEEEEEEEEEEETTE-----EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCC
T ss_pred -----CEEEEEECCCE-EEEEEEEEEEEECCE-----EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCC
Confidence 99999999999 569999999999986 888 99999998 655 5 4678999999997654
Q ss_pred -hHHHhhhh-----------------------cCCe---e---------ecC----------------CCCCcEEEcC--
Q 019179 231 -LISQMRTT-----------------------IAGN---Q---------RLG----------------VSTPDIVIDS-- 256 (345)
Q Consensus 231 -~~~ql~~~-----------------------~g~~---k---------~~~----------------~~~~~~iiDs-- 256 (345)
++.+|.++ +|+. + ... .....+||||
T Consensus 261 ~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~I~Vgg~~~~~~~aiiDSGT 340 (451)
T 3qvc_A 261 PYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSAT 340 (451)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEEEEETTEEEEEEEEEECTTB
T ss_pred CHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEEEEECCccCCCceEEEeCCC
Confidence 45555432 2222 0 000 0234689999
Q ss_pred ---------------------C--CccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeC--CCeEEEE-EEecC
Q 019179 257 ---------------------D--PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKGIT 310 (345)
Q Consensus 257 ---------------------~--~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~--~~~~C~~-~~~~~ 310 (345)
. ...+..+|. . ..+|+|+|+|+|.+++|||++|+++.. ++..|++ |.+.+
T Consensus 341 t~i~lP~~~~~~i~~~i~a~~~~~~g~y~v~C~-~---~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~ 416 (451)
T 3qvc_A 341 SVITVPTEFFNQFVESASVFKVPFLSLYVTTCG-N---TKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPID 416 (451)
T ss_dssp SSEEECHHHHHHHHTTTTCEECTTSSCEEEETT-C---TTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEECEEECC
T ss_pred ccccCCHHHHHHHHHHcCCeecCCCCeEEeeCC-c---CcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEEEEEeCC
Confidence 0 122334565 2 379999999999999999999999875 2468987 87765
Q ss_pred --CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 311 --NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 311 --~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
.+.||||++|||++|+|||++++|||||+++
T Consensus 417 ~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 417 LEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 4789999999999999999999999999985
No 21
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.7e-42 Score=324.19 Aligned_cols=226 Identities=21% Similarity=0.406 Sum_probs=179.7
Q ss_pred ccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCC--CCC-------CCCCCCCCCCCCCCCCCCcceecCCCCc
Q 019179 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCE--PCP-------PSQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (345)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~--~C~-------~~~C~~~~~~~y~~~~SsT~~~~~c~~~ 151 (345)
..++...+..|+++|.||||+|+++|+|||||+++||+|. +|. ...| ..++.|||++|+||+..+
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 2qzx_A 4 AVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFC--KSAGSYSPASSRTSQNLN---- 77 (342)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccc--cCCCcCCcccCCCcccCC----
Confidence 3455557889999999999999999999999999999865 675 1246 567899999999999987
Q ss_pred cccCCCCCCCCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCCCCCCceeeecCCCCC--
Q 019179 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (345)
Q Consensus 152 ~C~~~~~~~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 2qzx_A 78 --------------TRFDIKYGDGSYAKGKLYKDTVGIGGV-----SVRDQLFANVWSTS-----ARKGILGIGFQSGEA 133 (342)
T ss_dssp --------------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEEC-----SSSCEEECSCGGGCS
T ss_pred --------------CcEEEEeCCCCeEEEEEEEEEEEECCE-----EecceEEEEEEecC-----CCcCEEEEccccccC
Confidence 999999999998789999999999986 89999999999864 4689999999764
Q ss_pred ------hhHHHhhhh-----------------------cCCe---e------------------------ecC---CCCC
Q 019179 230 ------SLISQMRTT-----------------------IAGN---Q------------------------RLG---VSTP 250 (345)
Q Consensus 230 ------s~~~ql~~~-----------------------~g~~---k------------------------~~~---~~~~ 250 (345)
+++.+|.++ +|+. | ... ....
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~ 213 (342)
T 2qzx_A 134 TEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDANT 213 (342)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEEE
T ss_pred CCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCCCc
Confidence 566666432 1211 0 000 1124
Q ss_pred cEEEcC-------------------CC--------c-cccccccccccCCCcCeEEEEE-cCcEEEeCCcceEEEeC---
Q 019179 251 DIVIDS-------------------DP--------T-GSLELCYSFNSLSQVPEVTIHF-RGADVKLSRSNFFVKVS--- 298 (345)
Q Consensus 251 ~~iiDs-------------------~~--------~-~~~~~C~~~~~~~~~P~i~f~f-~g~~~~l~~~~y~~~~~--- 298 (345)
.+|||| .. . .+..+|+ .+|.|+|+| +|++|+||+++|+++..
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~------~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~ 287 (342)
T 2qzx_A 214 NVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVADCK------TSGTIDFQFGNNLKISVPVSEFLFQTYYTS 287 (342)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEECTT------CCCEEEEEETTTEEEEEEGGGGEECCBCTT
T ss_pred CEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEEECC------CCCcEEEEECCCcEEEEcHHHhcccccccC
Confidence 689999 11 0 1233454 489999999 57999999999998742
Q ss_pred --CCeEEEE-EEecCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 299 --EDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 299 --~~~~C~~-~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
++..|++ +.+. +.||||+.|||++|+|||++++|||||+++|.+
T Consensus 288 ~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 288 GKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp SCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 2357998 6654 479999999999999999999999999999974
No 22
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.2e-41 Score=326.60 Aligned_cols=245 Identities=20% Similarity=0.377 Sum_probs=188.8
Q ss_pred ccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCC------
Q 019179 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ------ 158 (345)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~------ 158 (345)
++.+++|+++|.||||+|++.|+|||||+++||+|.+| .+|+||+.+.|.++.|.....
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~---------------~~Sst~~~~~C~s~~C~~~~~~~c~~c 81 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ---------------YSSKTYQAPFCHSTQCSRANTHQCLSC 81 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC---------------CCCSSCBCCCTTBHHHHHTTCCCEEEC
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC---------------CCCCCCCccCCCCccccCccccCcccc
Confidence 45788999999999999999999999999999998754 368999999999999976543
Q ss_pred -----CCCCCCCceeEEEeC-CCCeEeeeEEEEEEEecCCCCCc------cccCCeEEEeEEecCCC-C-CCCCceeeec
Q 019179 159 -----KSCSGVNCQYSVSYG-DGSFSNGNLATETVTLGSTTGQA------VALPGITFGCGTNNGGL-F-NSKTTGIVGL 224 (345)
Q Consensus 159 -----~~c~~~~~~~~~~Y~-~gs~~~G~~~~D~v~~~~~~~~~------~~~~~~~fg~~~~~~~~-~-~~~~~GilGL 224 (345)
..|....|.|.+.|+ +|+.+.|.+++|+|+|++.++.. +.++++.|||++..... + ....+|||||
T Consensus 82 ~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGL 161 (403)
T 3aup_A 82 PAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGL 161 (403)
T ss_dssp SSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEEC
T ss_pred CCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEEC
Confidence 235445799999998 78888899999999999854433 68899999999987533 3 4678999999
Q ss_pred CCCCChhHHHhhhh----------------------cC----------C-----e-------------------------
Q 019179 225 GGGDISLISQMRTT----------------------IA----------G-----N------------------------- 242 (345)
Q Consensus 225 g~~~~s~~~ql~~~----------------------~g----------~-----~------------------------- 242 (345)
|++.++++.||++. || | .
T Consensus 162 g~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~g 241 (403)
T 3aup_A 162 GHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQ 241 (403)
T ss_dssp SSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEETT
T ss_pred CCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCCCcceEEEEEEEECC
Confidence 99999998887531 11 1 1
Q ss_pred eec-C-C---------CCCcEEEcCC----------------------Cc-------cccccccccccCCCcCeEEEEEc
Q 019179 243 QRL-G-V---------STPDIVIDSD----------------------PT-------GSLELCYSFNSLSQVPEVTIHFR 282 (345)
Q Consensus 243 k~~-~-~---------~~~~~iiDs~----------------------~~-------~~~~~C~~~~~~~~~P~i~f~f~ 282 (345)
+.. . . +.+++||||+ .. .....|+.......+|+|+|+|+
T Consensus 242 ~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i~f~f~ 321 (403)
T 3aup_A 242 HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMD 321 (403)
T ss_dssp EEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCEEEEES
T ss_pred EEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcEEEEEc
Confidence 001 1 0 1235999990 10 12335665432237999999999
Q ss_pred Cc---EEEeCCcceEEEeCCCeEEEEEEecC---CCcceechhhhceeEEEEECCCCEEEE-------eeCCCCC
Q 019179 283 GA---DVKLSRSNFFVKVSEDIVCSVFKGIT---NSVPIYGNIMQTNFLVGYDIEQQTVSF-------KPTDCTK 344 (345)
Q Consensus 283 g~---~~~l~~~~y~~~~~~~~~C~~~~~~~---~~~~ilG~~fl~~~y~vfD~~~~riGf-------A~~~C~~ 344 (345)
|. +|+||+++|+++..++..|++|+..+ .+.||||+.|||++|+|||++++|||| ++++|++
T Consensus 322 g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~ 396 (403)
T 3aup_A 322 KPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCAD 396 (403)
T ss_dssp STTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGGG
T ss_pred CCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccccCCCccc
Confidence 84 99999999999876566899988764 258999999999999999999999999 7788875
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.4e-41 Score=317.69 Aligned_cols=228 Identities=15% Similarity=0.198 Sum_probs=184.8
Q ss_pred cccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCC
Q 019179 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (345)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c 161 (345)
++.++.+..|+++|.|| +|+++|+|||||+++||+|..|....|....++.|||++| ||+..+
T Consensus 10 ~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~-------------- 72 (330)
T 1yg9_A 10 LVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG-------------- 72 (330)
T ss_dssp CEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE--------------
T ss_pred eeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC--------------
Confidence 34456788999999999 8999999999999999999999755785456789999999 999887
Q ss_pred CCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCC-CCCCceeeecCCCCCh-------hHH
Q 019179 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF-NSKTTGIVGLGGGDIS-------LIS 233 (345)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGLg~~~~s-------~~~ 233 (345)
+.|.+.|++|+. .|.+++|+|+|++. +++++.|||++.....| ....+||||||++.++ ++.
T Consensus 73 ----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 142 (330)
T 1yg9_A 73 ----NVQVKFFDTGSA-VGRGIEDSLTISQL-----TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLE 142 (330)
T ss_dssp ----EEEEEETTTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHH
T ss_pred ----CEEEEEECCceE-EEEEEEEEEEECCE-----EEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHH
Confidence 999999999988 69999999999986 89999999999884334 4678999999998776 445
Q ss_pred Hhhhh------------------------cCCe---------------------------eec----CCCCCcEEEcC--
Q 019179 234 QMRTT------------------------IAGN---------------------------QRL----GVSTPDIVIDS-- 256 (345)
Q Consensus 234 ql~~~------------------------~g~~---------------------------k~~----~~~~~~~iiDs-- 256 (345)
+|.++ +|+. +.. ......+||||
T Consensus 143 ~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGT 222 (330)
T 1yg9_A 143 NFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVAPAGTQAIIDTSK 222 (330)
T ss_dssp HHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEECTTCEEEECTTC
T ss_pred HHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEcCCCcEEEEecCC
Confidence 54322 1221 000 12356899999
Q ss_pred -----------------CC-----c--cc-cccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecC
Q 019179 257 -----------------DP-----T--GS-LELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT 310 (345)
Q Consensus 257 -----------------~~-----~--~~-~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~ 310 (345)
.. . .+ ..+|+... .+|+|+|+|+|++|+||+++|+++. +..|++ |.+.+
T Consensus 223 s~~~lP~~~~~~l~~~~~~~~~~~g~~~~~~~~C~~~~---~~p~i~f~fgg~~~~l~~~~y~~~~--~~~C~~~i~~~~ 297 (330)
T 1yg9_A 223 AIIVGPKAYVNPINEAIGCVVEKTTTRRICKLDCSKIP---SLPDVTFVINGRNFNISSQYYIQQN--GNLCYSGFQPCG 297 (330)
T ss_dssp SSEEEEHHHHHHHHHHHTCEEEECSSCEEEEECGGGGG---GSCCEEEEETTEEEEECHHHHEEEE--TTEEEESEEEET
T ss_pred ccccCCHHHHHHHHHHhCCcccCCCceEEEEEECCCcc---ccCcEEEEECCEEEEECHHHhcccC--CCcEEEEEEeCC
Confidence 11 1 23 45677543 7899999999999999999999987 358997 77643
Q ss_pred -CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 311 -NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 311 -~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
.+.||||++|||++|+|||++++|||||+++
T Consensus 298 ~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 298 HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 5689999999999999999999999999975
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=8.3e-42 Score=320.82 Aligned_cols=226 Identities=22% Similarity=0.401 Sum_probs=179.2
Q ss_pred ccccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCC--CC-------CCCCCCCCCCCCCCCCCCcceecCCCCc
Q 019179 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEP--CP-------PSQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (345)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~--C~-------~~~C~~~~~~~y~~~~SsT~~~~~c~~~ 151 (345)
..++...++.|+++|.||||+|+++|++||||+++||+|.. |. ...| ..++.|||++|+|++..+
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 3pvk_A 4 PVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFC--KQKGTYDPSGSSASQDLN---- 77 (342)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred ceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCC--CCCCcCCCccCcceeecC----
Confidence 34556678899999999999999999999999999998653 52 2357 467899999999999987
Q ss_pred cccCCCCCCCCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCCCCCCceeeecCCCCC--
Q 019179 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (345)
Q Consensus 152 ~C~~~~~~~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 3pvk_A 78 --------------TPFKIGYGDGSSSQGTLYKDTVGFGGV-----SIKNQVLADVDSTS-----IDQGILGVGYKTNEA 133 (342)
T ss_dssp --------------EEEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGCS
T ss_pred --------------CeEEEEecCCCeEEEEEEEEEEEECCE-----EecceEEEEEEccC-----CCccEEEecCccccc
Confidence 999999999997779999999999986 89999999998864 4699999999863
Q ss_pred -----hhHHHhhhh-----------------------cCCe---------------------------eec----CCCCC
Q 019179 230 -----SLISQMRTT-----------------------IAGN---------------------------QRL----GVSTP 250 (345)
Q Consensus 230 -----s~~~ql~~~-----------------------~g~~---------------------------k~~----~~~~~ 250 (345)
+++.+|.++ ||+. ... .....
T Consensus 134 ~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~ 213 (342)
T 3pvk_A 134 GGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTDNV 213 (342)
T ss_dssp SCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEEEE
T ss_pred cccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecCCCc
Confidence 466676542 1221 000 01125
Q ss_pred cEEEcC-------------------------CCc---cccccccccccCCCcCeEEEEEc-CcEEEeCCcceEEEeC--C
Q 019179 251 DIVIDS-------------------------DPT---GSLELCYSFNSLSQVPEVTIHFR-GADVKLSRSNFFVKVS--E 299 (345)
Q Consensus 251 ~~iiDs-------------------------~~~---~~~~~C~~~~~~~~~P~i~f~f~-g~~~~l~~~~y~~~~~--~ 299 (345)
.+|||| ... .+..+|+ ..|+|+|+|+ |.+|+||+++|+++.. +
T Consensus 214 ~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~ 287 (342)
T 3pvk_A 214 DVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVDCN------LSGDVVFNFSKNAKISVPASEFAASLQGDD 287 (342)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEECSC------CCSEEEEEESTTCEEEEEGGGGEEC-----
T ss_pred eEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEEecC------CCCceEEEECCCCEEEEcHHHheeeccccC
Confidence 789999 001 1345566 4599999998 7999999999998732 2
Q ss_pred C---eEEEE-EEecCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 300 D---IVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 300 ~---~~C~~-~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
+ ..|++ +.+. +.||||+.|||++|+|||++++|||||+++|+.
T Consensus 288 g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 288 GQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp -----CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 2 57988 6663 689999999999999999999999999999974
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-41 Score=315.96 Aligned_cols=224 Identities=19% Similarity=0.316 Sum_probs=180.3
Q ss_pred ccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCC
Q 019179 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (345)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (345)
...+..|+++|.|| +|+++|+|||||+++||+|.+|. .|.++.++.|||++|+ ++...
T Consensus 10 ~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~----------------- 67 (325)
T 1ibq_A 10 QNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP--SSEQTGHDLYTPSSSA-TKLSG----------------- 67 (325)
T ss_dssp CTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC--HHHHTTSCCCBCCSSC-EECTT-----------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC--ccccCCCCCCCchhcC-CccCC-----------------
Confidence 45788999999999 89999999999999999999998 6655788999999999 65444
Q ss_pred CceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCC--CCCCceeeecCCCCCh---------hHH
Q 019179 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LIS 233 (345)
Q Consensus 165 ~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~~ 233 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++...+.+ ....+||||||++.++ ++.
T Consensus 68 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 141 (325)
T 1ibq_A 68 -YSWDISYGDGSSASGDVYRDTVTVGGV-----TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFD 141 (325)
T ss_dssp -CBEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CEEEEEeCCCCEEEEEEEEeEEEECCE-----EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHH
Confidence 999999999997779999999999986 89999999999876644 3578999999997654 345
Q ss_pred Hhhhh-------------------cCCe----------------------------eec----CCCCCcEEEcC------
Q 019179 234 QMRTT-------------------IAGN----------------------------QRL----GVSTPDIVIDS------ 256 (345)
Q Consensus 234 ql~~~-------------------~g~~----------------------------k~~----~~~~~~~iiDs------ 256 (345)
+|.++ +|+. +.. ......+||||
T Consensus 142 ~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~ 221 (325)
T 1ibq_A 142 TVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLIL 221 (325)
T ss_dssp HHGGGSSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEE
T ss_pred HHHHhcCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCCcEe
Confidence 65432 2221 001 12345799999
Q ss_pred -----------C--C-------ccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeC--CCeEEEE-EEecC-CC
Q 019179 257 -----------D--P-------TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKGIT-NS 312 (345)
Q Consensus 257 -----------~--~-------~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~--~~~~C~~-~~~~~-~~ 312 (345)
. . ..+..+|+ ..+|+|+|+|+|++|+||+++|+++.. +...|++ |.+.+ .+
T Consensus 222 lP~~~~~~i~~~i~~a~~~~~~g~~~~~C~-----~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~~~ 296 (325)
T 1ibq_A 222 LDDEIVSAYYEQVSGAQESYEAGGYVFSCS-----TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLG 296 (325)
T ss_dssp ECHHHHHHHHTTSTTCBCCSSSSSCEEETT-----CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECTTTC
T ss_pred CCHHHHHHHHHhCCCceEcCcCCeEEEEcC-----CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCCCCC
Confidence 0 0 11223455 378999999999999999999998763 2368998 77754 57
Q ss_pred cceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 313 VPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 313 ~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
.||||++|||++|+|||++++|||||+++
T Consensus 297 ~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 297 LSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 89999999999999999999999999974
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2e-41 Score=315.71 Aligned_cols=224 Identities=16% Similarity=0.283 Sum_probs=180.1
Q ss_pred ccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCC
Q 019179 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (345)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (345)
...+..|+++|.|| +|+++|+|||||+++||+|.+|. .|.++.++.|||++|+ ++...
T Consensus 11 ~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~----------------- 68 (323)
T 1izd_A 11 TSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP--SSERSGHDYYTPGSSA-QKIDG----------------- 68 (323)
T ss_dssp CGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--HHHHTTCCCBCCCTTC-EEEEE-----------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC--cccccCCCCCCccccC-CccCC-----------------
Confidence 34678899999999 89999999999999999999998 6655788999999999 66555
Q ss_pred CceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCC--CCCCceeeecCCCCCh---------hHH
Q 019179 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LIS 233 (345)
Q Consensus 165 ~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~~ 233 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++...+.+ ....+||||||++.++ ++.
T Consensus 69 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 142 (323)
T 1izd_A 69 -ATWSISYGDGSSASGDVYKDKVTVGGV-----SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFD 142 (323)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CeEEEEcCCCCeEEEEEEEEEEEECCE-----EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHH
Confidence 999999999997779999999999986 89999999999876644 3678999999997654 344
Q ss_pred Hhhhh-------------------cCCe---e---------e----------------c---CCCCCcEEEcCC------
Q 019179 234 QMRTT-------------------IAGN---Q---------R----------------L---GVSTPDIVIDSD------ 257 (345)
Q Consensus 234 ql~~~-------------------~g~~---k---------~----------------~---~~~~~~~iiDs~------ 257 (345)
+|.++ +|+. + . . ......+||||+
T Consensus 143 ~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~l 222 (323)
T 1izd_A 143 NVKSSLSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLL 222 (323)
T ss_dssp HHGGGSSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEE
T ss_pred HHHHhccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECCcccCCCceEEEeCCCcceeC
Confidence 44332 2221 0 0 0 022457899990
Q ss_pred ----------C----------ccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCCCeEEEE-EEecC-CCcce
Q 019179 258 ----------P----------TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-NSVPI 315 (345)
Q Consensus 258 ----------~----------~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~C~~-~~~~~-~~~~i 315 (345)
. ..+..+|+ ..+|+|+|+|+|++|+||+++|+++..++..|++ |.+.+ .+.||
T Consensus 223 p~~~~~~i~~~i~ga~~~~~~g~~~~~C~-----~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~~~i~~~~~~~~~I 297 (323)
T 1izd_A 223 DDSIVDAYYEQVNGASYDSSQGGYVFPSS-----ASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNSGIGFSI 297 (323)
T ss_dssp CHHHHHHHHTTSTTCEEETTTTEEEEETT-----CCCCCEEEEETTEEEEECHHHHEEEECSTTEEEESEEECTTTSSEE
T ss_pred CHHHHHHHHHhCCCcEEcCcCCEEEEECC-----CCCceEEEEECCEEEecCHHHeEEecCCCCeEEEEEEcCCCCCcEE
Confidence 0 01123455 3789999999999999999999988755568998 87764 57899
Q ss_pred echhhhceeEEEEECCCCEEEEeeCC
Q 019179 316 YGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 316 lG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
||+.|||++|+|||++++|||||+++
T Consensus 298 lG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 298 FGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EChHHhcCEEEEEECCCCEEEEeeCC
Confidence 99999999999999999999999974
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.8e-41 Score=316.05 Aligned_cols=224 Identities=21% Similarity=0.359 Sum_probs=179.0
Q ss_pred ccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCC
Q 019179 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (345)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (345)
...+..|+++|.|| +|+++|+|||||+++||+|.+|. .|.++.++.|||++|+ ++...
T Consensus 11 ~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~----------------- 68 (323)
T 1bxo_A 11 TANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP--ASQQSGHSVYNPSATG-KELSG----------------- 68 (323)
T ss_dssp CGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCHHHHC-EEEEE-----------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC--chhccCCCCCCcccCC-cccCC-----------------
Confidence 44678899999999 89999999999999999999998 6655788999999999 76555
Q ss_pred CceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCC--CCCCceeeecCCCCCh---------hHH
Q 019179 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LIS 233 (345)
Q Consensus 165 ~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~~ 233 (345)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++..++.+ ....+||||||++.++ ++.
T Consensus 69 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~ 142 (323)
T 1bxo_A 69 -YTWSISYGDGSSASGNVFTDSVTVGGV-----TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFD 142 (323)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CeEEEEeCCCCeEEEEEEEEEEEECCE-----EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHH
Confidence 999999999997779999999999986 89999999999876644 3578999999997654 344
Q ss_pred Hhhhh-------------------cCCe---e---------e----------------cC--CCCCcEEEcCC-------
Q 019179 234 QMRTT-------------------IAGN---Q---------R----------------LG--VSTPDIVIDSD------- 257 (345)
Q Consensus 234 ql~~~-------------------~g~~---k---------~----------------~~--~~~~~~iiDs~------- 257 (345)
+|.++ +|+. + . .. .....+||||+
T Consensus 143 ~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP 222 (323)
T 1bxo_A 143 TVKSSLAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLD 222 (323)
T ss_dssp HHGGGBSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEEC
T ss_pred HHHHhcCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCC
Confidence 54432 2221 0 0 00 11246899990
Q ss_pred ---------C----------ccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCC-CeEEEE-EEecC-CCcce
Q 019179 258 ---------P----------TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE-DIVCSV-FKGIT-NSVPI 315 (345)
Q Consensus 258 ---------~----------~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~-~~~C~~-~~~~~-~~~~i 315 (345)
. ..+..+|+ ..+|+|+|+|+|++|+||+++|+++..+ +..|++ |.+.+ .+.||
T Consensus 223 ~~~~~~l~~~i~~a~~~~~~g~~~~~C~-----~~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~~i~~~~~~~~~I 297 (323)
T 1bxo_A 223 DSVVSQYYSQVSGAQQDSNAGGYVFDCS-----TNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSI 297 (323)
T ss_dssp HHHHHHHHTTSTTCEEETTTTEEEECTT-----CCCCCEEEEETTEEEEECHHHHEEEECSSSSCEEESEEECTTCSSEE
T ss_pred HHHHHHHHHhCCCceEcCcCCEEEEECC-----CCCceEEEEECCEEEEECHHHeEEeccCCCCeEEEEEECCCCCCcEE
Confidence 0 01123455 3789999999999999999999987643 368998 77764 56899
Q ss_pred echhhhceeEEEEECCCCEEEEeeCC
Q 019179 316 YGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 316 lG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
||++|||++|+|||++++|||||+++
T Consensus 298 LG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 298 FGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EChHHHcCEEEEEECCCCEEEEecCC
Confidence 99999999999999999999999974
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.6e-39 Score=314.94 Aligned_cols=232 Identities=21% Similarity=0.408 Sum_probs=177.0
Q ss_pred cCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCC
Q 019179 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (345)
Q Consensus 86 ~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~ 165 (345)
..+..|+++|.||||+|+++|+|||||+++||+|.+| | +.++.|||++|+||+..+
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c----c--~~~~~y~~~~SsT~~~~~------------------ 126 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH----P--FLHRYYQRQLSSTYRDLR------------------ 126 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC----T--TCSCCCCGGGCTTCEEEE------------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc----c--ccCCcccCCCCCCcccCC------------------
Confidence 3556899999999999999999999999999999887 4 467899999999999987
Q ss_pred ceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCC--CCCCceeeecCCCCCh--------hHHHh
Q 019179 166 CQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS--------LISQM 235 (345)
Q Consensus 166 ~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s--------~~~ql 235 (345)
|.|.+.|++|+. .|.+++|+|+|++.. .+.+ .+.|+++......| ....+||||||++.++ ++.+|
T Consensus 127 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 127 KGVYVPYTQGKW-EGELGTDLVSIPHGP--NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSC--SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred ccEEEEeCCeEE-EEEEEEEEEEECCCc--ceee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 999999999998 599999999998521 0122 36788888776655 3678999999997654 23333
Q ss_pred hhh--------------------------------cCCe-------------------------------eecCC-----
Q 019179 236 RTT--------------------------------IAGN-------------------------------QRLGV----- 247 (345)
Q Consensus 236 ~~~--------------------------------~g~~-------------------------------k~~~~----- 247 (345)
.++ ||+. +....
T Consensus 203 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~ 282 (455)
T 3lpj_A 203 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEY 282 (455)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGG
T ss_pred HHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEcccccccc
Confidence 211 2221 00000
Q ss_pred CCCcEEEcC----------------------CC---------ccccccccccccC--CCcCeEEEEEcCc------EEEe
Q 019179 248 STPDIVIDS----------------------DP---------TGSLELCYSFNSL--SQVPEVTIHFRGA------DVKL 288 (345)
Q Consensus 248 ~~~~~iiDs----------------------~~---------~~~~~~C~~~~~~--~~~P~i~f~f~g~------~~~l 288 (345)
....+|||| .. ..+..+|+..... ..+|+|+|+|+|. +|+|
T Consensus 283 ~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 362 (455)
T 3lpj_A 283 NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 362 (455)
T ss_dssp GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEE
Confidence 145799999 10 1125688876421 1489999999986 4999
Q ss_pred CCcceEEEeCCC----eEEEEEEec-CCCcceechhhhceeEEEEECCCCEEEEeeCCCCCC
Q 019179 289 SRSNFFVKVSED----IVCSVFKGI-TNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTKQ 345 (345)
Q Consensus 289 ~~~~y~~~~~~~----~~C~~~~~~-~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~~ 345 (345)
+|++|+++..+. ..|++|... ..+.||||++|||++|+|||++++|||||+++|++.
T Consensus 363 ~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 424 (455)
T 3lpj_A 363 LPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 424 (455)
T ss_dssp CHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred CHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccccc
Confidence 999999987542 489974221 257899999999999999999999999999999763
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=304.56 Aligned_cols=232 Identities=24% Similarity=0.381 Sum_probs=175.8
Q ss_pred ccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCC
Q 019179 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (345)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 162 (345)
+....+..|+++|.||||+|+++|+|||||+++||+|.+|. .| ++.|||++|+||+..+
T Consensus 7 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~~----~~~f~~~~SsT~~~~~--------------- 65 (383)
T 2ewy_A 7 LQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS--YI----DTYFDTERSSTYRSKG--------------- 65 (383)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT--TB----SCCCCGGGCTTCEEEE---------------
T ss_pred ccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC--cc----ccCcccccCccceeCC---------------
Confidence 33445668999999999999999999999999999999886 45 5789999999999987
Q ss_pred CCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccC-CeEEEeEEecCCCC--CCCCceeeecCCCCCh---------
Q 019179 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS--------- 230 (345)
Q Consensus 163 ~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s--------- 230 (345)
|.|.+.|++|+. .|.+++|+|+|++.. ... .+.|++..+..+.| ....+||||||++.++
T Consensus 66 ---~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~ 137 (383)
T 2ewy_A 66 ---FDVTVKYTQGSW-TGFVGEDLVTIPKGF----NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETF 137 (383)
T ss_dssp ---EEEEEECSSCEE-EEEEEEEEEEETTTE----EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCH
T ss_pred ---ceEEEEECCcEE-EEEEEEEEEEECCCc----cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCH
Confidence 999999999987 599999999998641 111 35688877655544 3568999999997653
Q ss_pred ---hHHHhhh--h-----------------------cCCe-------------------------------eecC---C-
Q 019179 231 ---LISQMRT--T-----------------------IAGN-------------------------------QRLG---V- 247 (345)
Q Consensus 231 ---~~~ql~~--~-----------------------~g~~-------------------------------k~~~---~- 247 (345)
+++|..- . ||+. +... .
T Consensus 138 ~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~ 217 (383)
T 2ewy_A 138 FDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCRE 217 (383)
T ss_dssp HHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTT
T ss_pred HHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccc
Confidence 2333210 0 1111 0000 0
Q ss_pred -CCCcEEEcC---------------------CC----------ccccccccccccC--CCcCeEEEEEcCc------EEE
Q 019179 248 -STPDIVIDS---------------------DP----------TGSLELCYSFNSL--SQVPEVTIHFRGA------DVK 287 (345)
Q Consensus 248 -~~~~~iiDs---------------------~~----------~~~~~~C~~~~~~--~~~P~i~f~f~g~------~~~ 287 (345)
....+|||| .. ..+..+|+..... ..+|+|+|+|+|. +|+
T Consensus 218 ~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 297 (383)
T 2ewy_A 218 YNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRIT 297 (383)
T ss_dssp TTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEE
T ss_pred cCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEE
Confidence 135799999 10 0124678865321 2689999999874 799
Q ss_pred eCCcceEEEeC---CCeEEEE--EEecCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 288 LSRSNFFVKVS---EDIVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 288 l~~~~y~~~~~---~~~~C~~--~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
|||++|+++.. ++..|++ +.+. .+.||||+.|||++|+|||++++|||||+++|++
T Consensus 298 l~~~~yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 298 ILPQLYIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp ECHHHHEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred EChHHheeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 99999998864 2458986 4444 5689999999999999999999999999999964
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.4e-38 Score=305.12 Aligned_cols=228 Identities=21% Similarity=0.413 Sum_probs=174.8
Q ss_pred CCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCCc
Q 019179 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNC 166 (345)
Q Consensus 87 ~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~~ 166 (345)
.+..|+++|.||||+|+++|+|||||+++||+|.+|. +.++.|||++|+||+..+ |
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~------~~~~~y~~~~SsT~~~~~------------------~ 81 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP------FLHRYYQRQLSSTYRDLR------------------K 81 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT------TCSCCCCGGGCTTCEEEE------------------E
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCCC------cccCCcCcccCcccccCC------------------C
Confidence 3467999999999999999999999999999999873 467899999999999987 9
Q ss_pred eeEEEeCCCCeEeeeEEEEEEEecCCCCCccccC-CeEEEeEEecCCCC--CCCCceeeecCCCCCh--------hHHHh
Q 019179 167 QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS--------LISQM 235 (345)
Q Consensus 167 ~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s--------~~~ql 235 (345)
.|.+.|++|+. .|.+++|+|+|++.. .++ .+.|+++....+.| ....+||||||++.++ ++.+|
T Consensus 82 ~~~i~Yg~Gs~-~G~~~~D~v~ig~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 82 GVYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEEECcEEE-EEEEEEEEEEECCcc----ccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 99999999997 599999999998521 233 24578877766544 3678999999997654 23333
Q ss_pred hhh--------------------------------cCCe-------------------------------eecCC-----
Q 019179 236 RTT--------------------------------IAGN-------------------------------QRLGV----- 247 (345)
Q Consensus 236 ~~~--------------------------------~g~~-------------------------------k~~~~----- 247 (345)
.++ +|+. +....
T Consensus 157 ~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~ 236 (402)
T 3vf3_A 157 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEY 236 (402)
T ss_dssp HHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGG
T ss_pred HHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEeccccccc
Confidence 211 1221 00000
Q ss_pred CCCcEEEcC----------------------C----C-----ccccccccccccC--CCcCeEEEEEcCc------EEEe
Q 019179 248 STPDIVIDS----------------------D----P-----TGSLELCYSFNSL--SQVPEVTIHFRGA------DVKL 288 (345)
Q Consensus 248 ~~~~~iiDs----------------------~----~-----~~~~~~C~~~~~~--~~~P~i~f~f~g~------~~~l 288 (345)
....+|||| . . ..+..+|+..... ..+|+|+|+|+|. +|+|
T Consensus 237 ~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 316 (402)
T 3vf3_A 237 NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 316 (402)
T ss_dssp GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEE
Confidence 245799999 1 0 1124688875321 2589999999985 5999
Q ss_pred CCcceEEEeCCC----eEEEE--EEecCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 289 SRSNFFVKVSED----IVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 289 ~~~~y~~~~~~~----~~C~~--~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
+|++|+++..+. ..|++ +.+. .+.||||++|||++|+|||++++|||||+++|++
T Consensus 317 ~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 317 LPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp CHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred CHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 999999987542 48996 3333 5789999999999999999999999999999985
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=8.1e-38 Score=299.24 Aligned_cols=228 Identities=21% Similarity=0.422 Sum_probs=174.3
Q ss_pred cCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCCCCC
Q 019179 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (345)
Q Consensus 86 ~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~ 165 (345)
..+..|+++|.||||+|+++|+|||||+++||+|.+|. . .++.|||++|+||+..+
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~--~----~~~~y~~~~SsT~~~~~------------------ 73 (395)
T 2qp8_A 18 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP--F----LHRYYQRQLSSTYRDLR------------------ 73 (395)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT--T----CSCCCCGGGCTTCEEEE------------------
T ss_pred CCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc--c----ccCCcCcccCCCceeCC------------------
Confidence 35678999999999999999999999999999999886 3 46889999999999987
Q ss_pred ceeEEEeCCCCeEeeeEEEEEEEecC-CCCCccccC-CeEEEeEEecCCCC--CCCCceeeecCCCCCh--------hHH
Q 019179 166 CQYSVSYGDGSFSNGNLATETVTLGS-TTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS--------LIS 233 (345)
Q Consensus 166 ~~~~~~Y~~gs~~~G~~~~D~v~~~~-~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s--------~~~ 233 (345)
|.|.+.|++|+. .|.+++|+|+|++ . .++ .+.|++.....+.| ....+||||||++.++ ++.
T Consensus 74 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~-----~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 147 (395)
T 2qp8_A 74 KGVYVPYTQGKW-EGELGTDLVSIPHGP-----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFD 147 (395)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSC-----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred ceEEEEECCcEE-EEEEEeEEEEECCCC-----CceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHH
Confidence 999999999987 5999999999984 3 332 36688877655544 3578999999997653 222
Q ss_pred Hhhhh--------------------------------cCCe-------------------------------eecC--C-
Q 019179 234 QMRTT--------------------------------IAGN-------------------------------QRLG--V- 247 (345)
Q Consensus 234 ql~~~--------------------------------~g~~-------------------------------k~~~--~- 247 (345)
+|.++ ||+. +... .
T Consensus 148 ~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~ 227 (395)
T 2qp8_A 148 SLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCK 227 (395)
T ss_dssp HHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGG
T ss_pred HHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCcc
Confidence 22110 1221 0000 0
Q ss_pred --CCCcEEEcC-----------------------CC--------ccccccccccccC--CCcCeEEEEEcCc------EE
Q 019179 248 --STPDIVIDS-----------------------DP--------TGSLELCYSFNSL--SQVPEVTIHFRGA------DV 286 (345)
Q Consensus 248 --~~~~~iiDs-----------------------~~--------~~~~~~C~~~~~~--~~~P~i~f~f~g~------~~ 286 (345)
....+|||| .. ..+..+|+..... ..+|+|+|+|+|. +|
T Consensus 228 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 307 (395)
T 2qp8_A 228 EYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 307 (395)
T ss_dssp GGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred ccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEE
Confidence 135799999 01 0124678875321 2589999999974 69
Q ss_pred EeCCcceEEEeCC----CeEEEE--EEecCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 287 KLSRSNFFVKVSE----DIVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 287 ~l~~~~y~~~~~~----~~~C~~--~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
+|+|++|+++..+ ...|++ +.+. ...||||+.|||++|+|||++++|||||+++|++
T Consensus 308 ~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 308 TILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred EECHHHhEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 9999999998643 348974 5544 5789999999999999999999999999999985
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-38 Score=296.82 Aligned_cols=219 Identities=21% Similarity=0.354 Sum_probs=167.8
Q ss_pred ccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCCCC
Q 019179 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (345)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 162 (345)
++...+..|+++|.||||+|+++|+|||||+++||+|. +.|||++|+++..
T Consensus 6 ~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~------------~~y~~s~Ss~~~~----------------- 56 (340)
T 1wkr_A 6 PATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD------------KSYVKTSTSSATS----------------- 56 (340)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS------------SCCCCCTTCEEEE-----------------
T ss_pred eeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC------------CccCCcCCccccC-----------------
Confidence 44445679999999999999999999999999999653 4799988886643
Q ss_pred CCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCCCCCCCCceeeecCCCCChh-----------
Q 019179 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISL----------- 231 (345)
Q Consensus 163 ~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~s~----------- 231 (345)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+ | ...+||||||++.+++
T Consensus 57 ---~~~~i~Yg~Gs~-~G~~~~Dtv~~g~~-----~v~~~~fg~~~~~~~-~-~~~~GilGLg~~~~s~~~~~~~~~~~~ 125 (340)
T 1wkr_A 57 ---DKVSVTYGSGSF-SGTEYTDTVTLGSL-----TIPKQSIGVASRDSG-F-DGVDGILGVGPVDLTVGTLSPHTSTSI 125 (340)
T ss_dssp ---EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEEES-C-TTCSEEEECSCGGGGTTSEESCTTCCC
T ss_pred ---ceEEEEECCcEE-EEEEEEEEEEECCE-----EEcceEEEEEEccCC-C-cCCCcEEECCccccccccccccccccC
Confidence 999999999984 59999999999986 899999999998755 4 4689999999976543
Q ss_pred ---HHHhhhh--------------------------cCCe---------------e----e-----c-----CC-----C
Q 019179 232 ---ISQMRTT--------------------------IAGN---------------Q----R-----L-----GV-----S 248 (345)
Q Consensus 232 ---~~ql~~~--------------------------~g~~---------------k----~-----~-----~~-----~ 248 (345)
+.+|.++ +|+. + . . .. .
T Consensus 126 ~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~~~i~v~~~~~l~~ 205 (340)
T 1wkr_A 126 PTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGINQSIRYGSSTSILS 205 (340)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEEEEEEETTTEEEEE
T ss_pred CCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEEeeEEECCCeEccC
Confidence 3333211 1111 0 0 0 00 0
Q ss_pred CCcEEEcC-------------------C------CccccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeC-----
Q 019179 249 TPDIVIDS-------------------D------PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS----- 298 (345)
Q Consensus 249 ~~~~iiDs-------------------~------~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~----- 298 (345)
...+|||| . ...+..+|.... .+|+|+|+|+|.+|+|+|++|+++..
T Consensus 206 ~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~~g~~~~~C~~~~---~~p~i~f~f~g~~~~i~~~~yi~~~~~~~~~ 282 (340)
T 1wkr_A 206 STAGIVDTGTTLTLIASDAFAKYKKATGAVADNNTGLLRLTTAQYA---NLQSLFFTIGGQTFELTANAQIWPRNLNTAI 282 (340)
T ss_dssp EEEEEECTTBCSEEECHHHHHHHHHHHTCEECTTTSSEEECHHHHH---TCCCEEEEETTEEEEECTGGGBCCGGGGGGG
T ss_pred CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCCCCeEEeeccccc---cCCcEEEEECCEEEEEcHHHhcccccccccc
Confidence 13589999 1 112345666433 78999999999999999999998753
Q ss_pred --CCeEEEE-EEecC-----CCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 019179 299 --EDIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 344 (345)
Q Consensus 299 --~~~~C~~-~~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~C~~ 344 (345)
....|+. |.+.+ +..||||+.|||++|+|||++++|||||+++|++
T Consensus 283 g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 283 GGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp TCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred CCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 1246765 66532 2469999999999999999999999999999975
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.4e-37 Score=292.70 Aligned_cols=233 Identities=22% Similarity=0.481 Sum_probs=173.7
Q ss_pred ccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCccccCCC---CCCC
Q 019179 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLN---QKSC 161 (345)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~---~~~c 161 (345)
++.+.+|+++|.|||| |+|||||+++||+|.+|. +|+.+.|.++.|.... ...|
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~------------------~~~~~~C~s~~C~~~~~~~~~sc 66 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ------------------PPAEIPCSSPTCLLANAYPAPGC 66 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC------------------CCCCCBTTSHHHHHHHSSCCTTC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC------------------CCCccCCCCchhccccCCCCCCC
Confidence 5678899999999998 999999999999987542 2445667777675321 2234
Q ss_pred CC---------CCc-eeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCe----EEEeEEecCC-CCCCCCceeeecCC
Q 019179 162 SG---------VNC-QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGI----TFGCGTNNGG-LFNSKTTGIVGLGG 226 (345)
Q Consensus 162 ~~---------~~~-~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~----~fg~~~~~~~-~~~~~~~GilGLg~ 226 (345)
.. ..| .|.+.|++|+.+.|.+++|+|+|++.++. +.++++ .|||++.... .+....|||||||+
T Consensus 67 ~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~-~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~ 145 (381)
T 1t6e_X 67 PAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGS-KPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLAN 145 (381)
T ss_dssp CCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSS-SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSS
T ss_pred CCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCC-ccccceeeeeEeecCcccccCCCCCCCceEEEeCC
Confidence 31 246 59999999998779999999999964321 255555 5799987622 22367899999999
Q ss_pred CCChhHHHhhhh--------------------cCCe------------------------------------eecC--CC
Q 019179 227 GDISLISQMRTT--------------------IAGN------------------------------------QRLG--VS 248 (345)
Q Consensus 227 ~~~s~~~ql~~~--------------------~g~~------------------------------------k~~~--~~ 248 (345)
+.+++++||..+ ||+. +... ..
T Consensus 146 ~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 146 SGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp STTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred CcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 999999988642 2221 0000 01
Q ss_pred ---CCcEEEcC-----------------------C-------------C-ccccccccccccC------CCcCeEEEEEc
Q 019179 249 ---TPDIVIDS-----------------------D-------------P-TGSLELCYSFNSL------SQVPEVTIHFR 282 (345)
Q Consensus 249 ---~~~~iiDs-----------------------~-------------~-~~~~~~C~~~~~~------~~~P~i~f~f~ 282 (345)
.+++|||| . . ...+..|+..++. ..+|+|+|+|+
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~ 305 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLD 305 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEET
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEEEEEC
Confidence 35699999 1 0 1235679876532 26899999998
Q ss_pred C-cEEEeCCcceEEEeCCCeEEEEEEecCC--------CcceechhhhceeEEEEECCCCEEEEeeCC
Q 019179 283 G-ADVKLSRSNFFVKVSEDIVCSVFKGITN--------SVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 341 (345)
Q Consensus 283 g-~~~~l~~~~y~~~~~~~~~C~~~~~~~~--------~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 341 (345)
| ++|+||+++|+++..++..|++|+..+. ..||||+.|||++|+|||++++|||||+++
T Consensus 306 gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 306 GGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp TSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred CCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 5 9999999999998766678999877542 589999999999999999999999999865
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.93 E-value=1.4e-26 Score=206.39 Aligned_cols=123 Identities=30% Similarity=0.512 Sum_probs=108.0
Q ss_pred cccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC-CCCCCCCCCCCCCCCCCCcceecCCCCccccCCCCCC
Q 019179 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (345)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~-~~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~ 160 (345)
++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|. +..|. .++.|||++|+||+..+
T Consensus 6 ~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------------- 70 (239)
T 1b5f_A 6 ALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACR--AHSMYESSDSSTYKENG------------- 70 (239)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHH--TSCCBCGGGCTTCEEEE-------------
T ss_pred eeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccC--CCCCCCCccCCCeeeCC-------------
Confidence 344668899999999999999999999999999999999996 23574 56899999999999987
Q ss_pred CCCCCceeEEEeCCCCeEeeeEEEEEEEecCCCCCccccCCeEEEeEEecCC-CC-CCCCceeeecCCCCCh
Q 019179 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS 230 (345)
Q Consensus 161 c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s 230 (345)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+ .| ....+||||||++.++
T Consensus 71 -----~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s 131 (239)
T 1b5f_A 71 -----TFGAIIYGTGSI-TGFFSQDSVTIGDL-----VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS 131 (239)
T ss_dssp -----EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS
T ss_pred -----cEEEEEECCCcE-EEEEEEEEEEECCc-----EEccEEEEEEEeccCccccccCcceEEecCccccc
Confidence 899999999985 59999999999986 899999999998765 24 4678999999999876
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.91 E-value=1.4e-24 Score=165.50 Aligned_cols=89 Identities=31% Similarity=0.476 Sum_probs=79.7
Q ss_pred cccccCCccEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCCCCCCCCCcceecCCCCccccCCCCC
Q 019179 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPP--SQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (345)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C~~--~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~ 159 (345)
++.++.+..|+++|.||||+|+|.|+|||||+++||+|..|.. ..| ..++.|||++|+||+...
T Consensus 6 ~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C--~~~~~y~p~~SsT~~~~~------------ 71 (97)
T 1lya_A 6 VLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIAC--WIHHKYNSDKSSTYVKNG------------ 71 (97)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHH--HTSCCBCGGGCTTCEEEE------------
T ss_pred eeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCccccc--CCCCCCCchhCCCceeCC------------
Confidence 3345688999999999999999999999999999999999963 357 457899999999999987
Q ss_pred CCCCCCceeEEEeCCCCeEeeeEEEEEEEecC
Q 019179 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGS 191 (345)
Q Consensus 160 ~c~~~~~~~~~~Y~~gs~~~G~~~~D~v~~~~ 191 (345)
|.|.+.|++|+. .|.+++|+|+|++
T Consensus 72 ------~~~~i~Yg~Gs~-~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------TSFDIHYGSGSL-SGYLSQDTVSVPC 96 (97)
T ss_dssp ------EEEEEECSSCEE-EEEEEEEEEEESC
T ss_pred ------CcEEEEECCcEE-EEEEEEEEEEECC
Confidence 999999999995 5999999999986
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.86 E-value=2.3e-21 Score=172.76 Aligned_cols=142 Identities=23% Similarity=0.450 Sum_probs=107.0
Q ss_pred cccCCeEEEeEEecCCC-C-CCCCceeeecCCCCCh------hHHHhhhh-------------------------cCCe-
Q 019179 197 VALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQMRTT-------------------------IAGN- 242 (345)
Q Consensus 197 ~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~ql~~~-------------------------~g~~- 242 (345)
++++++.|||++...+. | ....+||||||++.++ ++.+|.++ +|+.
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 47899999999998763 4 5689999999998765 33444321 1211
Q ss_pred --------------------------eec-----CCCCCcEEEcCC------------------------Cccccccccc
Q 019179 243 --------------------------QRL-----GVSTPDIVIDSD------------------------PTGSLELCYS 267 (345)
Q Consensus 243 --------------------------k~~-----~~~~~~~iiDs~------------------------~~~~~~~C~~ 267 (345)
+.. ......+||||+ ...+..+|+.
T Consensus 83 ~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~ 162 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIPCEK 162 (241)
T ss_dssp GGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEETTEEEEEGGG
T ss_pred HHHcCCceEEEECccccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccCCcEEEECCC
Confidence 001 123457999991 1123456876
Q ss_pred cccCCCcCeEEEEEcCcEEEeCCcceEEEeCC--CeEEEE-EEecC-----CCcceechhhhceeEEEEECCCCEEEEee
Q 019179 268 FNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKP 339 (345)
Q Consensus 268 ~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfA~ 339 (345)
.. .+|+|+|+|+|++|+|||++|+++... +..|++ |.+.+ .+.||||++|||++|+|||++++|||||+
T Consensus 163 ~~---~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~ 239 (241)
T 1lya_B 163 VS---TLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAE 239 (241)
T ss_dssp GG---GSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred Cc---cCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEEECCCCEEEEEE
Confidence 54 789999999999999999999998753 458997 87642 46899999999999999999999999999
Q ss_pred CC
Q 019179 340 TD 341 (345)
Q Consensus 340 ~~ 341 (345)
++
T Consensus 240 ~~ 241 (241)
T 1lya_B 240 AA 241 (241)
T ss_dssp EC
T ss_pred cC
Confidence 74
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.77 E-value=1.1e-18 Score=130.36 Aligned_cols=78 Identities=18% Similarity=0.402 Sum_probs=67.0
Q ss_pred ccccccccccCCCcCeEEEEEcCcEEEeCCcceEEEeCC--CeEEEE-EEecC----CCcceechhhhceeEEEEECCCC
Q 019179 261 SLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT----NSVPIYGNIMQTNFLVGYDIEQQ 333 (345)
Q Consensus 261 ~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~--~~~C~~-~~~~~----~~~~ilG~~fl~~~y~vfD~~~~ 333 (345)
+..+|.... .+|+|+|+|+|++++|+|++|+++... +..|++ |++.+ .+.||||++|||++|+|||++++
T Consensus 3 y~v~C~~~~---~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 3 LQVDCNTLS---SMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CEECGGGGG---GCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTT
T ss_pred EEEECCCCC---cCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCC
Confidence 456788654 799999999999999999999998653 358997 87642 46899999999999999999999
Q ss_pred EEEEeeCC
Q 019179 334 TVSFKPTD 341 (345)
Q Consensus 334 riGfA~~~ 341 (345)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999974
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.78 E-value=0.056 Score=43.19 Aligned_cols=31 Identities=23% Similarity=0.173 Sum_probs=26.8
Q ss_pred CCccEEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019179 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQC 119 (345)
Q Consensus 87 ~~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~ 119 (345)
..+.+++++.|+ ++++++++|||++.+.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 456789999998 7899999999999988854
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=87.90 E-value=0.54 Score=35.12 Aligned_cols=25 Identities=24% Similarity=0.142 Sum_probs=23.0
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEe
Q 019179 92 LIRISIGTPPTERLAVADTGSDLIWTQ 118 (345)
Q Consensus 92 ~~~i~vGtP~q~~~l~~DTGS~~~wv~ 118 (345)
++.|.|| .|.+.+++|||.+++-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 6789999 799999999999999996
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=87.23 E-value=0.64 Score=34.36 Aligned_cols=27 Identities=33% Similarity=0.364 Sum_probs=23.7
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 019179 92 LIRISIGTPPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 92 ~~~i~vGtP~q~~~l~~DTGS~~~wv~~~ 120 (345)
++.|.|| .|.+.+++|||.+++-+.-.
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5679999 79999999999999999644
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=84.36 E-value=1 Score=33.26 Aligned_cols=27 Identities=19% Similarity=0.078 Sum_probs=23.7
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 019179 92 LIRISIGTPPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 92 ~~~i~vGtP~q~~~l~~DTGS~~~wv~~~ 120 (345)
++.|.|| .|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5679999 89999999999999999543
No 42
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=82.09 E-value=1.3 Score=33.46 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=26.1
Q ss_pred EEEEEeC---CCCceEEEEEEcCCCceeEeCCCCC
Q 019179 92 LIRISIG---TPPTERLAVADTGSDLIWTQCEPCP 123 (345)
Q Consensus 92 ~~~i~vG---tP~q~~~l~~DTGS~~~wv~~~~C~ 123 (345)
.+.|.|| +|+|.+..++|||.+++-+.-..+.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4566666 7899999999999999999876544
No 43
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=81.00 E-value=1.5 Score=33.34 Aligned_cols=26 Identities=19% Similarity=0.218 Sum_probs=22.5
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 019179 92 LIRISIGTPPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 92 ~~~i~vGtP~q~~~l~~DTGS~~~wv~~~ 120 (345)
++ |.|| .|.+.+++|||.+++-+.-.
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 44 9999 79999999999999998643
No 44
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=77.33 E-value=2.6 Score=31.86 Aligned_cols=29 Identities=14% Similarity=0.175 Sum_probs=24.9
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCCCC
Q 019179 92 LIRISIGTPPTERLAVADTGSDLIWTQCEPC 122 (345)
Q Consensus 92 ~~~i~vGtP~q~~~l~~DTGS~~~wv~~~~C 122 (345)
.+.|.|| .|.+..++|||.+++-+.-.+.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 5678999 7999999999999999976543
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=76.77 E-value=2.3 Score=33.84 Aligned_cols=31 Identities=13% Similarity=0.124 Sum_probs=26.7
Q ss_pred CccEEEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 019179 88 NANYLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 88 ~~~Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~~ 120 (345)
...|++++.|. .+++++++|||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45689999998 79999999999999998553
No 46
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=66.85 E-value=5.6 Score=30.91 Aligned_cols=27 Identities=19% Similarity=0.139 Sum_probs=23.6
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019179 91 YLIRISIGTPPTERLAVADTGSDLIWTQC 119 (345)
Q Consensus 91 Y~~~i~vGtP~q~~~l~~DTGS~~~wv~~ 119 (345)
-++.+.|+ .|.+.+++|||.+++-+.-
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 46789999 7999999999999999854
No 47
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=64.39 E-value=6 Score=33.10 Aligned_cols=26 Identities=35% Similarity=0.390 Sum_probs=23.3
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019179 92 LIRISIGTPPTERLAVADTGSDLIWTQC 119 (345)
Q Consensus 92 ~~~i~vGtP~q~~~l~~DTGS~~~wv~~ 119 (345)
.+.|.|| .|.+.+++|||.+++-+.-
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 6789999 7999999999999999853
No 48
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=61.89 E-value=6.4 Score=30.18 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=19.6
Q ss_pred eCCCCceEEEEEEcCCCceeEeCCCC
Q 019179 97 IGTPPTERLAVADTGSDLIWTQCEPC 122 (345)
Q Consensus 97 vGtP~q~~~l~~DTGS~~~wv~~~~C 122 (345)
|| .|.+..++|||.+++-+.-...
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 55 6888999999999999975433
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.67 E-value=22 Score=29.61 Aligned_cols=26 Identities=35% Similarity=0.390 Sum_probs=23.2
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019179 92 LIRISIGTPPTERLAVADTGSDLIWTQC 119 (345)
Q Consensus 92 ~~~i~vGtP~q~~~l~~DTGS~~~wv~~ 119 (345)
.+.+.|| .|.+..++|||.+++-+..
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred cEEEEEC--CEEEeeeecccCCceeeec
Confidence 6789999 7999999999999999853
No 50
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=41.65 E-value=26 Score=31.26 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=25.7
Q ss_pred CCccEEEE---EEeCC---CCceEEEEEEcCCCceeEeCC
Q 019179 87 NNANYLIR---ISIGT---PPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 87 ~~~~Y~~~---i~vGt---P~q~~~l~~DTGS~~~wv~~~ 120 (345)
..+.|.+. |.||. +.....+++|||++++++|..
T Consensus 191 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 191 SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 45567665 56775 246789999999999999775
No 51
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=38.11 E-value=27 Score=31.06 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=24.6
Q ss_pred CCccEEEE---EEeCC-CCceEEEEEEcCCCceeEeCC
Q 019179 87 NNANYLIR---ISIGT-PPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 87 ~~~~Y~~~---i~vGt-P~q~~~l~~DTGS~~~wv~~~ 120 (345)
..+.|.++ |.||. +.....+++|||++++++|..
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 187 SQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp TTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred CCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 34556554 56764 235578999999999999875
No 52
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=35.96 E-value=11 Score=29.35 Aligned_cols=28 Identities=14% Similarity=0.147 Sum_probs=25.1
Q ss_pred CcceechhhhceeEEEEECCCCEEEEee
Q 019179 312 SVPIYGNIMQTNFLVGYDIEQQTVSFKP 339 (345)
Q Consensus 312 ~~~ilG~~fl~~~y~vfD~~~~riGfA~ 339 (345)
...|||..||+++-+..|+.+++|-|..
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 4589999999999999999999998853
No 53
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=35.92 E-value=30 Score=30.81 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=24.9
Q ss_pred CCccEEEE---EEeCCC---CceEEEEEEcCCCceeEeCC
Q 019179 87 NNANYLIR---ISIGTP---PTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 87 ~~~~Y~~~---i~vGtP---~q~~~l~~DTGS~~~wv~~~ 120 (345)
..+.|.+. |.||.- .....+++|||++++++|..
T Consensus 190 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 190 KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 34556554 678762 24578999999999999775
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=35.50 E-value=37 Score=30.11 Aligned_cols=34 Identities=32% Similarity=0.374 Sum_probs=25.1
Q ss_pred CCccEEEE---EEeCCC---CceEEEEEEcCCCceeEeCC
Q 019179 87 NNANYLIR---ISIGTP---PTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 87 ~~~~Y~~~---i~vGtP---~q~~~l~~DTGS~~~wv~~~ 120 (345)
..+.|.++ |.||.- .....+++|||++++++|..
T Consensus 186 ~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 186 SQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp TTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred CCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 44556554 567752 35688999999999999775
No 55
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=34.73 E-value=40 Score=28.47 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=23.2
Q ss_pred ccEEEE---EEeCCC-----CceEEEEEEcCCCceeEeCC
Q 019179 89 ANYLIR---ISIGTP-----PTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 89 ~~Y~~~---i~vGtP-----~q~~~l~~DTGS~~~wv~~~ 120 (345)
+.|.+. |.||.. .....++||||++++++|..
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 456554 677752 34578999999999999753
No 56
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=34.67 E-value=33 Score=30.43 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=24.6
Q ss_pred CCccEEEE---EEeCC--CCceEEEEEEcCCCceeEeCC
Q 019179 87 NNANYLIR---ISIGT--PPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 87 ~~~~Y~~~---i~vGt--P~q~~~l~~DTGS~~~wv~~~ 120 (345)
..+.|.+. |.||. +.....+++|||++++++|..
T Consensus 191 ~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 191 SRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp TTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred CCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 34556554 56775 234578999999999999875
No 57
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=31.30 E-value=39 Score=29.96 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=24.4
Q ss_pred CCccEEEE---EEeCC--CCceEEEEEEcCCCceeEeCC
Q 019179 87 NNANYLIR---ISIGT--PPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 87 ~~~~Y~~~---i~vGt--P~q~~~l~~DTGS~~~wv~~~ 120 (345)
..+.|.++ |.||. +.....+++|||++++++|..
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 187 SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDS 225 (323)
T ss_dssp TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHH
T ss_pred CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHH
Confidence 34556554 45665 235578999999999999775
No 58
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=30.34 E-value=46 Score=27.93 Aligned_cols=32 Identities=19% Similarity=0.367 Sum_probs=23.5
Q ss_pred ccEEE---EEEeCCC----CceEEEEEEcCCCceeEeCC
Q 019179 89 ANYLI---RISIGTP----PTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 89 ~~Y~~---~i~vGtP----~q~~~l~~DTGS~~~wv~~~ 120 (345)
+.|.+ .|.||.- .....+++|||++++++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 45554 4668752 24578999999999999775
No 59
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=26.33 E-value=27 Score=27.42 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=26.4
Q ss_pred CCcceechhhhceeEEEEECCCCEEEEeeC
Q 019179 311 NSVPIYGNIMQTNFLVGYDIEQQTVSFKPT 340 (345)
Q Consensus 311 ~~~~ilG~~fl~~~y~vfD~~~~riGfA~~ 340 (345)
....|||..||+.+-.+.|+++++|-|...
T Consensus 106 ~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 106 PMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 446899999999999999999999988654
No 60
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=20.61 E-value=88 Score=29.54 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=23.4
Q ss_pred ccEEEE---EEeCC-----CCceEEEEEEcCCCceeEeCC
Q 019179 89 ANYLIR---ISIGT-----PPTERLAVADTGSDLIWTQCE 120 (345)
Q Consensus 89 ~~Y~~~---i~vGt-----P~q~~~l~~DTGS~~~wv~~~ 120 (345)
+.|.+. |.||. +.....+++|||++++++|..
T Consensus 231 ~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 231 GYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp TTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred CeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 456554 56764 235678999999999999754
Done!