Query 019181
Match_columns 345
No_of_seqs 217 out of 1691
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 12:09:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 4.8E-45 1.6E-49 345.0 21.7 227 70-343 52-295 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 2E-45 6.7E-50 348.5 16.0 225 70-344 57-305 (383)
3 3vla_A EDGP; extracellular, in 100.0 3E-44 1E-48 343.8 22.2 243 71-335 17-295 (413)
4 1b5f_A Protein (cardosin A); h 100.0 1E-44 3.5E-49 322.9 15.5 216 70-333 9-238 (239)
5 2apr_A Rhizopuspepsin; hydrola 100.0 6.4E-44 2.2E-48 332.0 20.0 225 70-342 11-253 (325)
6 1tzs_A Cathepsin E; hydrolase, 100.0 3.8E-43 1.3E-47 330.1 21.4 230 61-343 14-263 (351)
7 3cms_A Chymosin B; hydrolase, 100.0 9.9E-44 3.4E-48 330.4 16.2 226 70-344 10-253 (323)
8 4aa9_A Chymosin; hydrolase, as 100.0 1.9E-43 6.6E-48 328.1 16.7 225 70-343 7-249 (320)
9 1mpp_A Pepsin; hydrolase(acid 100.0 5.6E-43 1.9E-47 330.3 19.1 226 70-343 14-274 (361)
10 1dpj_A Proteinase A; proteinas 100.0 3.5E-43 1.2E-47 327.6 17.4 224 70-343 9-254 (329)
11 1am5_A Pepsin, acid proteinase 100.0 5E-43 1.7E-47 325.9 17.3 224 70-343 8-249 (324)
12 2qzx_A Candidapepsin-5; aspart 100.0 1.3E-42 4.5E-47 325.4 19.6 223 72-343 10-258 (342)
13 3k1w_A Renin; protease, altern 100.0 4.1E-43 1.4E-47 328.7 15.8 228 70-343 14-261 (341)
14 1qdm_A Prophytepsin; aspartic 100.0 1.1E-42 3.7E-47 338.3 18.5 223 61-335 43-283 (478)
15 1htr_B Gastricsin; aspartyl pr 100.0 1.9E-42 6.4E-47 322.6 19.2 225 71-343 9-253 (329)
16 1j71_A Candidapepsin, aspartic 100.0 2.1E-42 7E-47 323.0 19.5 223 72-343 10-256 (334)
17 3c9x_A Trichoderma reesei aspa 100.0 6.5E-43 2.2E-47 325.7 16.0 225 71-342 12-256 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 1.1E-42 3.7E-47 324.2 16.3 223 72-342 13-255 (329)
19 3pvk_A Candidapepsin-2; hydrol 100.0 6.4E-42 2.2E-46 320.7 19.5 224 72-343 10-258 (342)
20 3fv3_A SAPP1P-secreted asparti 100.0 8.7E-42 3E-46 319.4 20.3 216 72-343 10-260 (339)
21 3aup_A SBG7S, BG, basic 7S glo 100.0 1E-41 3.5E-46 326.0 21.0 241 71-334 18-288 (403)
22 1miq_A Plasmepsin; aspartic pr 100.0 3.2E-42 1.1E-46 326.2 15.1 219 70-343 58-299 (375)
23 3qvc_A Histo-aspartic protease 100.0 6.3E-42 2.2E-46 330.3 15.2 218 70-342 133-373 (451)
24 1yg9_A Aspartic protease BLA G 100.0 1.5E-41 5.2E-46 316.5 15.7 223 70-343 13-258 (330)
25 3lpj_A Beta-secretase 1; alzhe 100.0 8.2E-41 2.8E-45 324.5 21.4 219 72-335 72-314 (455)
26 2bju_A Plasmepsin II; aspartic 100.0 1.1E-41 3.7E-46 328.3 12.2 220 70-343 134-375 (453)
27 2ewy_A Beta-secretase 2; BACE2 100.0 2.2E-40 7.7E-45 314.9 19.2 221 71-335 10-250 (383)
28 1ibq_A Aspergillopepsin; aspar 100.0 1.7E-40 6E-45 308.8 17.4 220 72-342 12-251 (325)
29 2qp8_A Beta-secretase 1; BACE1 100.0 6.6E-40 2.3E-44 312.8 21.1 219 72-335 19-261 (395)
30 3vf3_A Beta-secretase 1; struc 100.0 1.3E-39 4.5E-44 311.5 22.3 219 72-335 26-268 (402)
31 1izd_A Aspartic proteinase; su 100.0 4.9E-40 1.7E-44 305.5 15.9 219 72-342 13-251 (323)
32 1t6e_X Xylanase inhibitor; two 100.0 3.4E-39 1.2E-43 306.4 21.0 232 70-335 10-259 (381)
33 1bxo_A Protein (penicillopepsi 100.0 5.7E-40 1.9E-44 305.1 12.9 218 72-342 13-250 (323)
34 1wkr_A Polyporopepsin; hydrola 100.0 6.5E-39 2.2E-43 300.1 17.4 206 73-342 11-248 (340)
35 1lya_A Cathepsin D; lysosomal 99.9 1.3E-23 4.5E-28 159.5 5.1 84 70-183 9-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.9 4E-22 1.4E-26 177.2 13.0 139 194-343 5-162 (241)
37 2hs1_A HIV-1 protease; ultra-h 87.5 0.69 2.3E-05 34.1 4.4 28 77-106 10-37 (99)
38 1fmb_A EIAV protease; hydrolas 86.5 0.68 2.3E-05 34.4 3.9 27 76-104 9-35 (104)
39 2i1a_A DNA damage-inducible pr 85.3 0.76 2.6E-05 36.3 4.0 31 72-104 23-53 (148)
40 3ec0_A Protease; HIV-2, inhibi 84.7 1.1 3.9E-05 32.8 4.3 28 77-106 10-37 (99)
41 2i1a_A DNA damage-inducible pr 80.6 1.8 6.1E-05 34.0 4.4 29 286-327 31-59 (148)
42 3s8i_A Protein DDI1 homolog 1; 80.3 1.3 4.5E-05 35.1 3.5 29 286-327 29-57 (148)
43 3s8i_A Protein DDI1 homolog 1; 78.6 1.7 6E-05 34.4 3.7 31 73-105 22-52 (148)
44 2hah_A Protease, retropepsin; 77.6 2.1 7.1E-05 32.4 3.7 26 76-104 15-40 (116)
45 3liy_A Protease; hydrolase, hy 76.8 2.1 7.2E-05 32.1 3.4 31 77-107 12-45 (116)
46 3sqf_A Protease; folded monome 73.0 3.5 0.00012 31.0 3.8 30 76-107 10-39 (114)
47 3slz_A GAG-Pro-POL polyprotein 69.4 5.5 0.00019 30.8 4.3 31 73-105 20-50 (132)
48 1lya_A Cathepsin D; lysosomal 67.5 4.4 0.00015 29.4 3.3 16 308-323 30-45 (97)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 59.9 7.6 0.00026 32.4 3.7 27 76-104 9-35 (203)
50 2rsp_A RSV protease; hydrolase 59.4 9 0.00031 29.2 3.8 23 82-106 27-49 (124)
51 1fmb_A EIAV protease; hydrolas 57.4 6.7 0.00023 29.0 2.7 34 278-324 5-38 (104)
52 2hs1_A HIV-1 protease; ultra-h 57.0 6.5 0.00022 28.8 2.5 30 279-321 6-35 (99)
53 2hah_A Protease, retropepsin; 56.8 7.5 0.00026 29.3 2.9 31 277-321 10-40 (116)
54 3ec0_A Protease; HIV-2, inhibi 54.6 7.7 0.00026 28.3 2.5 30 278-320 5-34 (99)
55 3slz_A GAG-Pro-POL polyprotein 46.5 17 0.00058 28.0 3.5 28 282-322 23-50 (132)
56 3fv3_A SAPP1P-secreted asparti 42.3 12 0.0004 33.5 2.4 15 308-322 29-43 (339)
57 1bxo_A Protein (penicillopepsi 41.6 19 0.00065 32.0 3.6 40 268-324 7-46 (323)
58 1j71_A Candidapepsin, aspartic 40.8 13 0.00044 33.3 2.4 15 308-322 29-43 (334)
59 1izd_A Aspartic proteinase; su 40.1 21 0.00071 31.7 3.6 40 268-324 7-46 (323)
60 1wkr_A Polyporopepsin; hydrola 38.6 17 0.00057 32.6 2.8 14 308-321 29-42 (340)
61 1yg9_A Aspartic protease BLA G 38.1 21 0.0007 31.9 3.3 30 277-322 17-46 (330)
62 2qzx_A Candidapepsin-5; aspart 37.7 15 0.00052 32.8 2.4 15 308-322 29-43 (342)
63 3ka2_A [L-Ala51;Gly51']HIV-1 p 37.6 36 0.0012 28.2 4.4 27 76-104 113-139 (203)
64 1ibq_A Aspergillopepsin; aspar 37.3 21 0.00073 31.7 3.2 40 268-324 6-45 (325)
65 3pvk_A Candidapepsin-2; hydrol 36.6 16 0.00056 32.6 2.4 15 308-322 29-43 (342)
66 1b5f_A Protein (cardosin A); h 35.1 28 0.00096 29.4 3.5 16 308-323 30-45 (239)
67 1htr_B Gastricsin; aspartyl pr 32.4 25 0.00085 31.2 2.8 16 308-323 29-44 (329)
68 3c9x_A Trichoderma reesei aspa 32.2 33 0.0011 30.4 3.6 17 308-324 32-48 (329)
69 1oew_A Endothiapepsin; hydrola 31.4 35 0.0012 30.3 3.6 16 308-323 32-47 (329)
70 2apr_A Rhizopuspepsin; hydrola 31.3 31 0.0011 30.5 3.3 15 308-322 32-46 (325)
71 3liy_A Protease; hydrolase, hy 30.5 26 0.00089 26.2 2.1 28 281-321 10-42 (116)
72 3sqf_A Protease; folded monome 30.1 45 0.0016 24.9 3.4 27 282-321 10-36 (114)
73 2rsp_A RSV protease; hydrolase 28.6 23 0.00079 26.9 1.6 14 308-321 34-47 (124)
74 1mpp_A Pepsin; hydrolase(acid 28.1 38 0.0013 30.5 3.3 15 308-322 35-49 (361)
75 1dpj_A Proteinase A; proteinas 27.8 42 0.0014 29.7 3.5 16 308-323 30-45 (329)
76 3aup_A SBG7S, BG, basic 7S glo 26.6 44 0.0015 30.6 3.5 15 308-322 38-52 (403)
77 3vla_A EDGP; extracellular, in 26.5 39 0.0013 31.2 3.1 14 308-321 37-50 (413)
78 2qp8_A Beta-secretase 1; BACE1 26.0 46 0.0016 30.3 3.5 15 308-322 38-52 (395)
79 3cms_A Chymosin B; hydrolase, 25.8 48 0.0016 29.2 3.5 16 308-323 31-46 (323)
80 1am5_A Pepsin, acid proteinase 25.2 57 0.0019 28.7 3.9 16 308-323 29-44 (324)
81 2ewy_A Beta-secretase 2; BACE2 24.9 50 0.0017 29.9 3.5 15 308-322 30-44 (383)
82 4aa9_A Chymosin; hydrolase, as 24.6 48 0.0016 29.1 3.3 15 308-322 28-42 (320)
83 3vf3_A Beta-secretase 1; struc 23.9 49 0.0017 30.2 3.3 15 308-322 45-59 (402)
84 2x0b_A Renin; hydrolase-hormon 23.7 54 0.0019 29.9 3.5 17 308-324 78-94 (383)
85 2bju_A Plasmepsin II; aspartic 23.4 50 0.0017 31.0 3.3 15 308-322 155-169 (453)
86 1lya_B Cathepsin D; lysosomal 22.8 72 0.0025 26.6 3.9 32 74-105 99-137 (241)
87 1tzs_A Cathepsin E; hydrolase, 21.6 51 0.0017 29.5 2.8 15 308-322 40-54 (351)
88 3qvc_A Histo-aspartic protease 21.4 59 0.002 30.5 3.3 15 308-322 154-168 (451)
89 1qdm_A Prophytepsin; aspartic 21.1 64 0.0022 30.4 3.5 15 308-322 69-83 (478)
90 3lpj_A Beta-secretase 1; alzhe 20.8 66 0.0022 30.0 3.5 15 308-322 91-105 (455)
91 3k1w_A Renin; protease, altern 20.2 66 0.0023 28.4 3.3 16 308-323 35-50 (341)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.8e-45 Score=344.98 Aligned_cols=227 Identities=26% Similarity=0.401 Sum_probs=192.7
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (345)
++.+..|+++|+||||+|+|.|+|||||+++||+|..|..| .|..++.|||++|+||+..
T Consensus 52 n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~-----~C~~~~~y~~~~SsT~~~~--------------- 111 (370)
T 3psg_A 52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSL-----ACSDHNQFNPDDSSTFEAT--------------- 111 (370)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSG-----GGTTSCCBCGGGCTTCEEE---------------
T ss_pred eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCc-----ccCCCCCCCCccCcCcEEC---------------
Confidence 77899999999999999999999999999999999999743 2334589999999999984
Q ss_pred CCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCC-CCCCCCCCcceeeecCCCCC
Q 019181 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSNS 228 (345)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg~~~~ 228 (345)
+|.|.+.|++|+ +.|.+++|+|++++.. ++++.|||+....+. |. ...+|||||||++..
T Consensus 112 -------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~~~---~~~~dGIlGLg~~~~ 172 (370)
T 3psg_A 112 -------SQELSITYGTGS-MTGILGYDTVQVGGIS--------DTNQIFGLSETEPGSFLY---YAPFDGILGLAYPSI 172 (370)
T ss_dssp -------EEEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGGG---GCSCSEEEECSCGGG
T ss_pred -------CcEEEEEeCCce-EEEEEEEEEEeeCCcc--------cCCeEEEEEEeecccccc---cCCccceeccCCccc
Confidence 467999999998 5999999999999854 568999999987653 32 256899999999754
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECCEEeeCC
Q 019181 229 ------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (345)
Q Consensus 229 ------s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 296 (345)
+++++|++||+| +++||+||.+. ..+|.|+|||+|+ +++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 173 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~- 250 (370)
T 3psg_A 173 SASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC- 250 (370)
T ss_dssp CGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC-
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEec-
Confidence 589999999999 79999999985 4589999999996 679999997 568999999999999987652
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc----ccccccCC
Q 019181 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI----EYIFWRSS 343 (345)
Q Consensus 297 ~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~----~~~~~~~~ 343 (345)
.++..+|+||||+++++|.+++++|.+++++.. .|.++|+.
T Consensus 251 ------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~ 295 (370)
T 3psg_A 251 ------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSS 295 (370)
T ss_dssp ------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGG
T ss_pred ------CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCC
Confidence 235679999999999999999999999998764 36778875
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=348.55 Aligned_cols=225 Identities=24% Similarity=0.401 Sum_probs=191.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC----CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~----~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~ 145 (345)
++.+..|+++|.||||+|+|.|+|||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 57 n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~-------~~~y~~~~SsT~~~~----------- 118 (383)
T 2x0b_A 57 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-------HKLFDASDSSSYKHN----------- 118 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT-------SCCBCGGGCTTCEEE-----------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC-------CCCCCCCCCCcEEEC-----------
Confidence 567889999999999999999999999999999999886 4654 479999999999983
Q ss_pred CCCCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCC-CCCCCCCCcceeeecC
Q 019181 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFG 224 (345)
Q Consensus 146 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg 224 (345)
+|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++...+. |.. ..+|||||||
T Consensus 119 -----------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~f~~---~~~dGIlGLg 174 (383)
T 2x0b_A 119 -----------GTELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALPFML---AEFDGVVGMG 174 (383)
T ss_dssp -----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHHHTT---CSSSEEEECS
T ss_pred -----------CcEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCccccc---CCCceEeccC
Confidence 567999999998 5999999999998753 56 999999987542 322 5689999999
Q ss_pred CCCC------cHHHHhhhcCCC-CCceEEeecCC-C----CcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEE
Q 019181 225 KSNS------SMISQLASSGGV-RKMFAHCLDGI-N----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQV 288 (345)
Q Consensus 225 ~~~~------s~~~ql~~~g~i-~~~Fs~~l~~~-~----~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v 288 (345)
++.. +++++|++||+| +++||+||.+. . .+|.|+|||+|+. ++.|+|+. ..++|.|.|++|+|
T Consensus 175 ~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v 253 (383)
T 2x0b_A 175 FIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSV 253 (383)
T ss_dssp CGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEE
T ss_pred CCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEe
Confidence 9764 589999999999 79999999886 2 2799999999974 58999997 56899999999999
Q ss_pred CCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc---ccccccCCC
Q 019181 289 GLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI---EYIFWRSSV 344 (345)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~---~~~~~~~~~ 344 (345)
+++.+. ...+..+|+||||+++++|.+++++|.+++++.. .|.++|+.+
T Consensus 254 ~~~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~g~~~v~C~~~ 305 (383)
T 2x0b_A 254 GSSTLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEG 305 (383)
T ss_dssp SSCCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGT
T ss_pred CCceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcccCCcEEEecccc
Confidence 987642 1345679999999999999999999999998753 466788753
No 3
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=3e-44 Score=343.81 Aligned_cols=243 Identities=23% Similarity=0.356 Sum_probs=201.1
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCC
Q 019181 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (345)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~ 150 (345)
..++.|+++|.||||+|+|.|+|||||+++||+|..| .+|+||+.++|+++.|.......+.
T Consensus 17 ~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s~~C~~~~~~~~~ 78 (413)
T 3vla_A 17 ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRTSQCSLSGSIACG 78 (413)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTSHHHHHTTCCEEE
T ss_pred CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCcccccccccCCCc
Confidence 4578999999999999999999999999999998764 3789999999999999876654332
Q ss_pred --------CCCCCCCCCCceee-CCCCcEEEEEEEEEEEEecccCCcc-ccccCceeEEeeeeeccCCCCCCCCCCccee
Q 019181 151 --------DCTANTSCPYLEIY-GDGSSTTGYFVQDVVQYDKVSGDLQ-TTSTNGSLIFGCGARQSGNLDSTNEEALDGI 220 (345)
Q Consensus 151 --------~C~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~i~~~~~~~~-~~~~~~~~~fg~~~~~~~~~~~~~~~~~~Gi 220 (345)
.|. ++.|.|.+.| ++|+.+.|.+++|+|+|++..+... ....++++.|||+........ ....|||
T Consensus 79 ~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~---~~~~dGI 154 (413)
T 3vla_A 79 DCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL---ASGVVGM 154 (413)
T ss_dssp CCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS---CTTCCEE
T ss_pred ccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc---ccccccc
Confidence 343 3579999999 4877779999999999986543221 013467899999998632111 2468999
Q ss_pred eecCCCCCcHHHHhhhcCCCCCceEEeecCC-CCcceEEeCCCCC---------CC-ceEecCCCCC-------------
Q 019181 221 IGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ---------PE-VNKTPLVPNQ------------- 276 (345)
Q Consensus 221 lGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~~-~~~G~l~~Gg~d~---------~~-~~~~p~~~~~------------- 276 (345)
||||++..|++.||.+++.|+++||+||.+. ..+|.|+||++|. ++ +.|+|++.++
T Consensus 155 lGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~ 234 (413)
T 3vla_A 155 AGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPS 234 (413)
T ss_dssp EECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCC
T ss_pred cccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCC
Confidence 9999999999999999998899999999984 5679999999874 35 9999998653
Q ss_pred CceEEEEeEEEECCEEeeCCCcccccC--CCccEEEcccccccccChHHHHHHHHHHHhhc
Q 019181 277 PHYSINMTAVQVGLDFLNLPTDVFGVG--DNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI 335 (345)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~--~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~ 335 (345)
.+|.|.|++|+||++.+.++...+..+ +.+.+||||||++++||+++|++|.++|.+..
T Consensus 235 ~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~ 295 (413)
T 3vla_A 235 VEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES 295 (413)
T ss_dssp CSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh
Confidence 699999999999999998877666532 35789999999999999999999999999865
No 4
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1e-44 Score=322.90 Aligned_cols=216 Identities=27% Similarity=0.406 Sum_probs=185.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~---~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 146 (345)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~------------ 69 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-------HSMYESSDSSTYKEN------------ 69 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-------SCCBCGGGCTTCEEE------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-------CCCCCCccCCCeeeC------------
Confidence 567889999999999999999999999999999999986 4654 378999999999974
Q ss_pred CCCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccC-CCCCCCCCCcceeeecCC
Q 019181 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGK 225 (345)
Q Consensus 147 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GilGLg~ 225 (345)
.|.|.+.|++|+ +.|.+++|+|++++.. ++++.||++....+ .|.. ...+||||||+
T Consensus 70 ----------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~f~~---~~~~GilGLg~ 127 (239)
T 1b5f_A 70 ----------GTFGAIIYGTGS-ITGFFSQDSVTIGDLV--------VKEQDFIEATDEADNVFLH---RLFDGILGLSF 127 (239)
T ss_dssp ----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHTT---CSCCEEEECSC
T ss_pred ----------CcEEEEEECCCc-EEEEEEEEEEEECCcE--------EccEEEEEEEeccCccccc---cCcceEEecCc
Confidence 456899999998 5999999999998754 55899999987643 2332 56899999999
Q ss_pred CCCc--HHHHhhhcCCC-CCceEEeecCC---CCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEEeeC
Q 019181 226 SNSS--MISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (345)
Q Consensus 226 ~~~s--~~~ql~~~g~i-~~~Fs~~l~~~---~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (345)
+..+ ++.+|++||+| +++||+||.+. ...|.|+||++|+. ++.|+|+. ..++|.|.+++|+|+++.+.+
T Consensus 128 ~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (239)
T 1b5f_A 128 QTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGF 206 (239)
T ss_dssp CSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCT
T ss_pred cccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecc
Confidence 8865 78899999999 79999999874 35799999999974 57899997 468999999999999988764
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHh
Q 019181 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCD 333 (345)
Q Consensus 296 ~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~ 333 (345)
.. ....+||||||++++||++++++|+++|++
T Consensus 207 ~~------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 207 CA------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TT------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cC------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 32 245699999999999999999999999875
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=6.4e-44 Score=331.98 Aligned_cols=225 Identities=26% Similarity=0.416 Sum_probs=191.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (345)
...+..|+++|.||||+|++.|+|||||+++||+|..|..| . ..++.|||++|+||+.
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~-----~~~~~y~~~~SsT~~~---------------- 68 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-G-----SGQTKYDPNQSSTYQA---------------- 68 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-C-----TTSCCBCGGGCTTCEE----------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-h-----cCCCCCCcccCCCeee----------------
Confidence 34678999999999999999999999999999999999988 2 2348999999999997
Q ss_pred CCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCCC-
Q 019181 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (345)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~- 228 (345)
..|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+...++.|.. ...+||||||++..
T Consensus 69 ------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~f~~---~~~~GilGLg~~~~s 131 (325)
T 2apr_A 69 ------DGRTWSISYGDGSSASGILAKDNVNLGGLL--------IKGQTIELAKREAASFAS---GPNDGLLGLGFDTIT 131 (325)
T ss_dssp ------EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHT---SSCSEEEECSCGGGC
T ss_pred ------CCCEEEEEECCCCCEEEEEEEEEEEECCEE--------ECcEEEEEEeccCccccc---CCCceEEEeCCcccc
Confidence 346799999999977999999999998754 558999999987654433 45899999999753
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCC--CCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECCEEeeC
Q 019181 229 ------SMISQLASSGGV-RKMFAHCLDGI--NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (345)
Q Consensus 229 ------s~~~ql~~~g~i-~~~Fs~~l~~~--~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (345)
+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+..+.++|.|.+++|+|+++ +.
T Consensus 132 ~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~- 209 (325)
T 2apr_A 132 TVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV- 209 (325)
T ss_dssp SSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE-
T ss_pred cccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec-
Confidence 589999999999 79999999653 5689999999985 568999997667899999999999983 31
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc----ccccccC
Q 019181 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI----EYIFWRS 342 (345)
Q Consensus 296 ~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~----~~~~~~~ 342 (345)
.....+||||||++++||+++|+++++++.+.. .+.++|+
T Consensus 210 -------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~g~~~~~C~ 253 (325)
T 2apr_A 210 -------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGDGTYTISCD 253 (325)
T ss_dssp -------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSSSCEEECSC
T ss_pred -------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCCCeEEEECC
Confidence 124569999999999999999999999998764 3566775
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=330.09 Aligned_cols=230 Identities=24% Similarity=0.390 Sum_probs=194.6
Q ss_pred CcCCCCCCCCCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCC
Q 019181 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQ 138 (345)
Q Consensus 61 ~~p~~~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~ 138 (345)
..|+. ++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 14 ~~~l~----n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~----- 77 (351)
T 1tzs_A 14 KEPLI----NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT-------HSRFQPSQSSTYSQ----- 77 (351)
T ss_dssp CCTTG----GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-------SCCBCGGGCTTCBC-----
T ss_pred ceece----ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC-------CCcCCcccCcceEE-----
Confidence 35665 567889999999999999999999999999999999997 5654 37899999999997
Q ss_pred cccCCCCCCCCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCC-CCCCCCCCc
Q 019181 139 EFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEAL 217 (345)
Q Consensus 139 ~~C~~~~~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~ 217 (345)
.+|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+. |. ....
T Consensus 78 -----------------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~~---~~~~ 128 (351)
T 1tzs_A 78 -----------------PGQSFSIQYGTGS-LSGIIGADQVSVEGLT--------VVGQQFGESVTEPGQTFV---DAEF 128 (351)
T ss_dssp -----------------CSCEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGGG---GCSC
T ss_pred -----------------CCCEEEEEeCCCC-eEEEEEEeEEEECCeE--------ECCeEEEEEEeccccccc---cCCC
Confidence 4678999999998 5999999999998754 558999999876543 22 2568
Q ss_pred ceeeecCCCCC------cHHHHhhhcCCC-CCceEEeecCCC---CcceEEeCCCCC----CCceEecCCCCCCceEEEE
Q 019181 218 DGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN---GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINM 283 (345)
Q Consensus 218 ~GilGLg~~~~------s~~~ql~~~g~i-~~~Fs~~l~~~~---~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l 283 (345)
+||||||++.. +++++|++||+| +++||+||.+.. ..|.|+|||+|+ +++.|+|+. ...+|.|.+
T Consensus 129 ~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l 207 (351)
T 1tzs_A 129 DGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIAL 207 (351)
T ss_dssp SEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEE
T ss_pred ceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEe
Confidence 99999999754 589999999999 799999998862 279999999996 568999997 468999999
Q ss_pred eEEEECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc---ccccccCC
Q 019181 284 TAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI---EYIFWRSS 343 (345)
Q Consensus 284 ~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~---~~~~~~~~ 343 (345)
++|+|+++.+.. .....+||||||++++||.+++++|++++++.. .+.++|+.
T Consensus 208 ~~i~v~~~~~~~-------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~g~~~~~C~~ 263 (351)
T 1tzs_A 208 DNIQVGGTVMFC-------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVDGEYAVECAN 263 (351)
T ss_dssp EEEEETTEEEEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSSEEECGGG
T ss_pred CEEEECCceEEc-------CCCceEEeccCCcceeCCHHHHHHHHHHhCCcccCCeEEEeCCC
Confidence 999999987532 234679999999999999999999999998764 35667764
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=9.9e-44 Score=330.44 Aligned_cols=226 Identities=22% Similarity=0.351 Sum_probs=191.7
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 69 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-------HQRFDPRKSSTFQNL------------- 69 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-------CCCCCCccCCCeEEC-------------
Confidence 567889999999999999999999999999999999984 5654 378999999999984
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccC-CCCCCCCCCcceeeecCCC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGKS 226 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GilGLg~~ 226 (345)
+|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+ .|.. ...+||||||++
T Consensus 70 ---------~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~~~---~~~~GilGLg~~ 128 (323)
T 3cms_A 70 ---------GKPLSIHYGTGS-MQGILGYDTVTVSNIV--------DIQQTVGLSTQEPGDFFTY---AEFDGILGMAYP 128 (323)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHHHH---SSCSEEEECSCG
T ss_pred ---------CcEEEEEeCCCC-eEEEEEEEEEEECCeE--------EeccEEEEEEecccccccc---cCCceEEecCcc
Confidence 467899999998 5999999999998754 55899999998754 2221 457999999997
Q ss_pred CC------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEEeeC
Q 019181 227 NS------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (345)
Q Consensus 227 ~~------s~~~ql~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (345)
.. +++++|++||+| +++||+||.+....|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 ~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (323)
T 3cms_A 129 SLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVAC 207 (323)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEES
T ss_pred hhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeec
Confidence 53 689999999999 8999999988644599999999974 58999997 468999999999999988753
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc----ccccccCCC
Q 019181 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI----EYIFWRSSV 344 (345)
Q Consensus 296 ~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~----~~~~~~~~~ 344 (345)
+ ....+||||||+++++|.+++++|++++++.. .+.++|+.+
T Consensus 208 ~-------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~~ 253 (323)
T 3cms_A 208 E-------GGCQAILDTGTSKLVGPSSDILNIQQAIGATQNQYGEFDIDCDNL 253 (323)
T ss_dssp T-------TCEEEEECTTCCSEEECHHHHHHHHHHHTCEEETTTEEEECTTCT
T ss_pred C-------CCcEEEEecCCccEeCCHHHHHHHHHHhCCeecCCCcEEEECCCC
Confidence 2 34569999999999999999999999998753 356788753
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.9e-43 Score=328.11 Aligned_cols=225 Identities=24% Similarity=0.397 Sum_probs=192.2
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
++.+..|+++|.||||+|+++|++||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 66 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKN-------HHRFDPRKSSTFRNL------------- 66 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCC-------CCCCCCCCCcCeEcC-------------
Confidence 677899999999999999999999999999999999997 3543 479999999999984
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCC-CCCCCCCCcceeeecCCC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKS 226 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg~~ 226 (345)
+|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+. +.. ...+||||||++
T Consensus 67 ---------~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~~~---~~~~GilGLg~~ 125 (320)
T 4aa9_A 67 ---------GKPLSIHYGTGS-MEGFLGYDTVTVSNIV--------DPNQTVGLSTEQPGEVFTY---SEFDGILGLAYP 125 (320)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHHHS---CCCSEEEECSCG
T ss_pred ---------CcEEEEEECCcE-EEEEEEEEEEEECCEe--------ecCeEEEEEEEcccccccc---cCcccEEecCcc
Confidence 467899999998 5999999999999854 568999999987652 322 457999999986
Q ss_pred C------CcHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEEeeC
Q 019181 227 N------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (345)
Q Consensus 227 ~------~s~~~ql~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (345)
. .+++++|++||+| +++||+||.+....|.|+|||+|+. ++.|+|+. +..+|.|.+++|+|+++.+..
T Consensus 126 ~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~ 204 (320)
T 4aa9_A 126 SLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVAC 204 (320)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEES
T ss_pred cccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEecc
Confidence 4 4599999999999 8999999998656899999999974 58999997 568999999999999988753
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc----ccccccCC
Q 019181 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI----EYIFWRSS 343 (345)
Q Consensus 296 ~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~----~~~~~~~~ 343 (345)
+ ....++|||||++++||.+++++|++++++.. .+.++|+.
T Consensus 205 ~-------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~g~~~~~C~~ 249 (320)
T 4aa9_A 205 V-------GGCQAILDTGTSVLFGPSSDILKIQMAIGATENRYGEFDVNCGN 249 (320)
T ss_dssp T-------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEECTTSCEEECGGG
T ss_pred C-------CCcEEEEECCCCcEECCHHHHHHHHHHhCCcccCCCcEEEeCCC
Confidence 2 34569999999999999999999999998753 25677764
No 9
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.6e-43 Score=330.26 Aligned_cols=226 Identities=23% Similarity=0.342 Sum_probs=192.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~---~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 146 (345)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+||+..
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~------------ 74 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKET------------ 74 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEEE------------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEec------------
Confidence 567889999999999999999999999999999999997 67643 78999999999984
Q ss_pred CCCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccC------CCCCCCCCCccee
Q 019181 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG------NLDSTNEEALDGI 220 (345)
Q Consensus 147 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~------~~~~~~~~~~~Gi 220 (345)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ .|.. ...+||
T Consensus 75 ----------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~~~~~~~~---~~~~Gi 132 (361)
T 1mpp_A 75 ----------DYNLNITYGTGG-ANGIYFRDSITVGGAT--------VKQQTLAYVDNVSGPTAEQSPDSE---LFLDGI 132 (361)
T ss_dssp ----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEESGGGSSCTTCS---SCCCEE
T ss_pred ----------CCeEEEEECCce-EEEEEEEEEEEECCEE--------EeceEEEEEEeccCcccccccccc---CCCCCE
Confidence 467899999999 5999999999999754 56899999998765 2332 568999
Q ss_pred eecCCCC------------CcHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCCCC----CCceEecCCCCCC---ceE
Q 019181 221 IGFGKSN------------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQP---HYS 280 (345)
Q Consensus 221 lGLg~~~------------~s~~~ql~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~---~w~ 280 (345)
||||++. .+++++|++||+| +++||+||.+....|.|+|||+|+ +++.|+|+....+ +|.
T Consensus 133 lGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~ 212 (361)
T 1mpp_A 133 FGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWD 212 (361)
T ss_dssp EECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEE
T ss_pred EEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEE
Confidence 9999963 4588899999999 799999998854589999999996 5689999986544 899
Q ss_pred EEEeEEEECCEEeeCCCcccccCCCccEE-EcccccccccChHHHHHHHHHHHhhcc-----cccccCC
Q 019181 281 INMTAVQVGLDFLNLPTDVFGVGDNKGTI-IDSGTTLAYLPEMVYEPLVSKVCDVIE-----YIFWRSS 343 (345)
Q Consensus 281 v~l~~i~v~~~~~~~~~~~~~~~~~~~~i-~DTGts~~~lp~~~~~~i~~~i~~~~~-----~~~~~~~ 343 (345)
|.+++|+|+++.+..+ ....+| |||||++++||.+++++|++++++..+ +.++|+.
T Consensus 213 v~l~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~ 274 (361)
T 1mpp_A 213 APVTGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATESQQGYTVPCSK 274 (361)
T ss_dssp EEEEEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEEETTEEEEEHHH
T ss_pred EEEeEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccCCCCcEEEECCC
Confidence 9999999999876421 235699 999999999999999999999988542 4566653
No 10
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.5e-43 Score=327.60 Aligned_cols=224 Identities=25% Similarity=0.450 Sum_probs=190.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCC--CCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~--C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
++.+..|+++|.||||+|++.|+|||||+++||+|..|.. |..+ +.|||++|+||+.
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~-------------- 67 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH-------SKYDHEASSSYKA-------------- 67 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEE--------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc-------CcCCcccCcCeEE--------------
Confidence 5667899999999999999999999999999999999986 6543 7899999999997
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccC-CCCCCCCCCcceeeecCCC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGKS 226 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GilGLg~~ 226 (345)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ .|.. ...+||||||++
T Consensus 68 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~f~~---~~~~GilGLg~~ 127 (329)
T 1dpj_A 68 --------NGTEFAIQYGTGS-LEGYISQDTLSIGDLT--------IPKQDFAEATSEPGLTFAF---GKFDGILGLGYD 127 (329)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCHHHHTT---CSCSEEEECSCG
T ss_pred --------CCcEEEEEECCce-EEEEEEEEEEEECCeE--------ECCeEEEEEEecCcccccc---CCcceEEEeCCc
Confidence 3568999999995 6999999999998754 55899999998754 2332 568999999997
Q ss_pred CC------cHHHHhhhcCCC-CCceEEeecCCC----CcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCE
Q 019181 227 NS------SMISQLASSGGV-RKMFAHCLDGIN----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (345)
Q Consensus 227 ~~------s~~~ql~~~g~i-~~~Fs~~l~~~~----~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (345)
.. +++++|++||+| +++||+||.+.. .+|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++
T Consensus 128 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 128 TISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTE
T ss_pred hhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCe
Confidence 64 478999999999 799999997642 3799999999964 58899997 56899999999999998
Q ss_pred EeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc----ccccccCC
Q 019181 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI----EYIFWRSS 343 (345)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~----~~~~~~~~ 343 (345)
.+.. .+..+||||||++++||.+++++|++++++.. .|.++|+.
T Consensus 207 ~~~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~ 254 (329)
T 1dpj_A 207 YAEL--------ESHGAAIDTGTSLITLPSGLAEMINAEIGAKKGWTGQYTLDCNT 254 (329)
T ss_dssp EEEC--------SSCEEEECTTCSCEEECHHHHHHHHHHHTCEECTTSSEEECGGG
T ss_pred EecC--------CCccEEeeCCCCcEECCHHHHHHHHHHhCCccCCCCeEEEECCC
Confidence 7752 24569999999999999999999999998652 35667764
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=5e-43 Score=325.87 Aligned_cols=224 Identities=23% Similarity=0.359 Sum_probs=191.2
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 67 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-------HNKFKPRQSSTYVET------------- 67 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-------CCcCCCccCCCeEeC-------------
Confidence 567889999999999999999999999999999999987 4654 378999999999984
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCC-CCCCCCCCcceeeecCCC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKS 226 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg~~ 226 (345)
+|.|.+.|++|+. .|.+++|+|++++.. ++++.|||+....+. |.. ...+||||||++
T Consensus 68 ---------~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~~~---~~~~GilGLg~~ 126 (324)
T 1am5_A 68 ---------GKTVDLTYGTGGM-RGILGQDTVSVGGGS--------DPNQELGESQTEPGPFQAA---APFDGILGLAYP 126 (324)
T ss_dssp ---------EEEEEEECSSCEE-EEEEEEEEEESSSSC--------EEEEEEEEEEECCSTTTTT---CSSSEEEECSCG
T ss_pred ---------CcEEEEEECCCCe-EEEEEECceeECCcE--------EcccEEEEEEecccccccC---CCCceEEecCCc
Confidence 4678999999986 999999999999754 558999999987653 322 578999999997
Q ss_pred CC------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECCEEee
Q 019181 227 NS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (345)
Q Consensus 227 ~~------s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 294 (345)
.. +++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.+++|+|+++.+.
T Consensus 127 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~ 205 (324)
T 1am5_A 127 SIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAA 205 (324)
T ss_dssp GGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECC
T ss_pred cccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceee
Confidence 53 589999999999 89999999885 3589999999996 568999997 46899999999999998753
Q ss_pred CCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh---cccccccCC
Q 019181 295 LPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDV---IEYIFWRSS 343 (345)
Q Consensus 295 ~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~---~~~~~~~~~ 343 (345)
. .+ ..+||||||++++||++++++|++++++. ..+.++|+.
T Consensus 206 ~-------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~g~~~~~C~~ 249 (324)
T 1am5_A 206 C-------EG-CQAIVDTGTSKIVAPVSALANIMKDIGASENQGEMMGNCAS 249 (324)
T ss_dssp C-------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCEECCCCEECCTTS
T ss_pred c-------cC-ceEEEecCCccEECCHHHHHHHHHHhCCcccCCcEEEeCCC
Confidence 1 12 56999999999999999999999999875 225677875
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.3e-42 Score=325.40 Aligned_cols=223 Identities=22% Similarity=0.341 Sum_probs=188.5
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCC--CCCCCCC--CCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~--~C~~C~~--~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
.+..|+++|.||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+||+..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNL------------- 76 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEE-------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccC-------------
Confidence 4678999999999999999999999999999976 6765432 1234556689999999999984
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (345)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 77 ---------NTRFDIKYGDGSYAKGKLYKDTVGIGGVS--------VRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp ---------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred ---------CCcEEEEeCCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEecC---------CCcCEEEEcccc
Confidence 46799999999977999999999999754 5689999999763 368999999975
Q ss_pred C--------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEEe
Q 019181 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (345)
Q Consensus 228 ~--------s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (345)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+.. ..+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS-EKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC-SSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC-CceEEEEEeEEEECCEec
Confidence 3 799999999999 79999999875 56899999999864 589999974 469999999999999887
Q ss_pred eCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc--------ccccccCC
Q 019181 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI--------EYIFWRSS 343 (345)
Q Consensus 294 ~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~--------~~~~~~~~ 343 (345)
.. ...+||||||++++||++++++|++++++.. .+.++|+.
T Consensus 210 ~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~ 258 (342)
T 2qzx_A 210 DA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVADCKT 258 (342)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEECTTC
T ss_pred CC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEEECCC
Confidence 53 2459999999999999999999999998864 24567753
No 13
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.1e-43 Score=328.70 Aligned_cols=228 Identities=23% Similarity=0.384 Sum_probs=191.8
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (345)
++.+..|+++|.||||+|++.|++||||+++||+|..|..|. ..|..++.|||++|+||+.
T Consensus 14 n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~---~~C~~~~~y~~~~SsT~~~---------------- 74 (341)
T 3k1w_A 14 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLY---TACVYHKLFDASDSSSYKH---------------- 74 (341)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTC---HHHHTSCCBCGGGCTTCEE----------------
T ss_pred EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCC---CcccCCCCCCCCcCcCeeE----------------
Confidence 567889999999999999999999999999999999987321 1122347999999999997
Q ss_pred CCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCC-CCCCCCCCcceeeecCCCCC
Q 019181 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSNS 228 (345)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg~~~~ 228 (345)
..|.|.+.|++|+ +.|.+++|+|+|++.. + ++.|||+....+. +.. ...+||||||++..
T Consensus 75 ------~~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~~~~---~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 75 ------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALPFML---AEFDGVVGMGFIEQ 135 (341)
T ss_dssp ------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHHHTT---CSSSEEEECSCGGG
T ss_pred ------CCCEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEcccccccc---CCcceEEECCchhh
Confidence 3567999999998 6999999999998753 5 8999999987653 332 56899999999764
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCC-----CcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEE
Q 019181 229 ------SMISQLASSGGV-RKMFAHCLDGIN-----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDF 292 (345)
Q Consensus 229 ------s~~~ql~~~g~i-~~~Fs~~l~~~~-----~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~ 292 (345)
+++++|++||+| +++||+||.+.. ..|.|+|||+|+. ++.|+|+. +..+|.|.+++|+|+++.
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSST 214 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEETTEE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEECCEE
Confidence 489999999999 799999998852 3799999999975 58999997 678999999999999987
Q ss_pred eeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhcc---cccccCC
Q 019181 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVIE---YIFWRSS 343 (345)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~~---~~~~~~~ 343 (345)
+.. .....++|||||++++||.+++++|++++++... |.++|+.
T Consensus 215 ~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~g~~~~C~~ 261 (341)
T 3k1w_A 215 LLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNE 261 (341)
T ss_dssp EEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGG
T ss_pred eec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeecCCCeEEeCCC
Confidence 532 2345699999999999999999999999987643 6677764
No 14
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.1e-42 Score=338.33 Aligned_cols=223 Identities=27% Similarity=0.398 Sum_probs=188.3
Q ss_pred CcCCCCCCCCCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCCCCCCccccccCCCCCCCcceecCC
Q 019181 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCD 137 (345)
Q Consensus 61 ~~p~~~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~---~C~~~~~~~~~~~~y~p~~Sst~~~~~c~ 137 (345)
..|+. ++.+..|+++|.||||+|+|.|+|||||+++||+|..|. .|. .++.|||++|+||+.
T Consensus 43 ~~~l~----n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~-------~~~~y~~~~SsT~~~---- 107 (478)
T 1qdm_A 43 IVALK----NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY-------LHSRYKAGASSTYKK---- 107 (478)
T ss_dssp SGGGC----CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG-------GSCCBCGGGCTTCBC----
T ss_pred eEEeE----eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc-------CCCCCCcccCCCeee----
Confidence 35555 567889999999999999999999999999999999885 454 347999999999987
Q ss_pred CcccCCCCCCCCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCC-CCCCCCCC
Q 019181 138 QEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEA 216 (345)
Q Consensus 138 ~~~C~~~~~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~ 216 (345)
.+|.|.+.|++|+ +.|.+++|+|+|++.. ++++.||+++...+. |.. ..
T Consensus 108 ------------------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~f~~---~~ 157 (478)
T 1qdm_A 108 ------------------NGKPAAIQYGTGS-IAGYFSEDSVTVGDLV--------VKDQEFIEATKEPGITFLV---AK 157 (478)
T ss_dssp ------------------CCCEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCBSHHHH---CS
T ss_pred ------------------CCcEEEEEcCCCC-eEEEEEEEEEEECCeE--------ECCEEEEEEEecCCccccc---cc
Confidence 4578999999998 5999999999999754 558999999876542 222 46
Q ss_pred cceeeecCCCCC------cHHHHhhhcCCC-CCceEEeecCC---CCcceEEeCCCCCC----CceEecCCCCCCceEEE
Q 019181 217 LDGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSIN 282 (345)
Q Consensus 217 ~~GilGLg~~~~------s~~~ql~~~g~i-~~~Fs~~l~~~---~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~ 282 (345)
+|||||||++.. +++++|++||+| .++||+||.+. ..+|.|+|||+|+. ++.|+|+. ..++|.|.
T Consensus 158 ~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~ 236 (478)
T 1qdm_A 158 FDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFD 236 (478)
T ss_dssp SSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEE
T ss_pred ccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEE
Confidence 799999999765 478999999999 79999999875 34799999999975 47899986 56899999
Q ss_pred EeEEEECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc
Q 019181 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI 335 (345)
Q Consensus 283 l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~ 335 (345)
+++|.|+++.+.+.. .+..+|+||||+++++|.+++++|.++|++..
T Consensus 237 l~~i~v~g~~~~~~~------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~ 283 (478)
T 1qdm_A 237 MGDVLVGGKSTGFCA------GGCAAIADSGTSLLAGPTAIITEINEKIGAAG 283 (478)
T ss_dssp ECCEEETTEECSTTT------TCEEEEECSSCCSEEECHHHHHHHHHHHTCCC
T ss_pred EeEEEECCEEEeecC------CCceEEEcCCCCceeCCHHHHHHHHHHhCccc
Confidence 999999998875432 35679999999999999999999999998754
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.9e-42 Score=322.65 Aligned_cols=225 Identities=24% Similarity=0.449 Sum_probs=190.8
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCC--CCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCC
Q 019181 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP 148 (345)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~--C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 148 (345)
+.+..|+++|.||||+|++.|+|||||+++||+|..|.. |.. ++.|||++|+||+..
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~-------------- 67 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS-------HSRFNPSESSTYSTN-------------- 67 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE--------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC-------CCcCCCccCCCeEEC--------------
Confidence 467899999999999999999999999999999999873 654 378999999999984
Q ss_pred CCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCC-CCCCCCCCcceeeecCCCC
Q 019181 149 LTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSN 227 (345)
Q Consensus 149 ~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg~~~ 227 (345)
+|.|.+.|++|+. .|.+++|+|+|++.. ++++.|||+....+. |.. ...+||||||++.
T Consensus 68 --------~~~~~i~Yg~gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~~~---~~~~GilGLg~~~ 127 (329)
T 1htr_B 68 --------GQTFSLQYGSGSL-TGFFGYDTLTVQSIQ--------VPNQEFGLSENEPGTNFVY---AQFDGIMGLAYPA 127 (329)
T ss_dssp --------EEEEEEEETTEEE-EEEEEEEEEEETTEE--------EEEEEEEEESSCSSGGGGG---CSCCEEEECCCCS
T ss_pred --------CcEEEEEeCCCCe-EEEEEeeeEEEcceE--------ECceEEEEEEEcccccccc---CCCceEEecCCCc
Confidence 4679999999986 999999999998754 558999999987553 322 5689999999976
Q ss_pred C------cHHHHhhhcCCC-CCceEEeecCCCC--cceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEEee
Q 019181 228 S------SMISQLASSGGV-RKMFAHCLDGING--GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (345)
Q Consensus 228 ~------s~~~ql~~~g~i-~~~Fs~~l~~~~~--~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 294 (345)
. +++++|++||+| +++||+||.+... .|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+.
T Consensus 128 ~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~ 206 (329)
T 1htr_B 128 LSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASG 206 (329)
T ss_dssp CCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECC
T ss_pred ccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceee
Confidence 4 589999999999 8999999988632 799999999974 58999997 46899999999999998754
Q ss_pred CCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc----ccccccCC
Q 019181 295 LPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI----EYIFWRSS 343 (345)
Q Consensus 295 ~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~----~~~~~~~~ 343 (345)
. ......+||||||++++||++++++|++++++.. .+.++|+.
T Consensus 207 ~------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~~g~~~~~C~~ 253 (329)
T 1htr_B 207 W------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDEYGQFLVNCNS 253 (329)
T ss_dssp T------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEECTTSCEEECGGG
T ss_pred e------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeecCCCeEEEeCCC
Confidence 1 1235679999999999999999999999998754 35677864
No 16
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-42 Score=323.02 Aligned_cols=223 Identities=21% Similarity=0.314 Sum_probs=187.9
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCC--CCCCCCC--CCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~--~C~~C~~--~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
.+..|+++|.||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+||+..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNL------------- 76 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEE-------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccC-------------
Confidence 3678999999999999999999999999999976 6765421 1223555689999999999984
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (345)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+.... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 77 ---------NQDFSIEYGDLTSSQGSFYKDTVGFGGIS--------IKNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp ---------EEEEEEEBTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ---------CCceEEEECCCCEEEEEEEEEEEEECCEE--------EccEEEEEEEecC---------CCccEEEEcCCc
Confidence 46799999999977999999999999754 5689999999763 368999999975
Q ss_pred C--------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCCCC----ceEecCCCCCCceEEEEeEEEECCEEe
Q 019181 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFL 293 (345)
Q Consensus 228 ~--------s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (345)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+.+ +.|+|+. ...+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEec
Confidence 3 799999999999 79999999875 568999999999764 7899997 4569999999999999887
Q ss_pred eCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhcc-----cc-cccCC
Q 019181 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVIE-----YI-FWRSS 343 (345)
Q Consensus 294 ~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~~-----~~-~~~~~ 343 (345)
.. ...+||||||++++||++++++|++++++..+ +. ++|+.
T Consensus 210 ~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~C~~ 256 (334)
T 1j71_A 210 ST---------NADVVLDSGTTITYFSQSTADKFARIVGATWDSRNEIYRLPSCDL 256 (334)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEETTTTEEECSSSCC
T ss_pred cC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCcccCCCceEEEEcCCC
Confidence 53 24599999999999999999999999987642 44 67753
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=6.5e-43 Score=325.70 Aligned_cols=225 Identities=25% Similarity=0.348 Sum_probs=187.8
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCC
Q 019181 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (345)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~ 150 (345)
..+..|+++|.||||+|++.|+|||||+++||+|..|..|..+ .++.|||++|+||+.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~-----~~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT-----GHAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCGGGCTTCEECT---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC-----CCCcCCcccCcCceEcC---------------
Confidence 4678899999999999999999999999999999999876422 34799999999999753
Q ss_pred CCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCCC--
Q 019181 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (345)
Q Consensus 151 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~-- 228 (345)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+...++.+.. ....+||||||++..
T Consensus 72 ------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 72 ------GASWSISYGDGSSSSGDVYTDKVTIGGFS--------VNTQGVESATRVSTEFVQ--DTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TCBEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHH--CTTCCEEEECSCGGGCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EcceEEEEEEecCccccc--cCCCceeEEeCcccccc
Confidence 46799999999977999999999999754 558999999987553321 135799999999642
Q ss_pred -------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECCEEeeCC
Q 019181 229 -------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (345)
Q Consensus 229 -------s~~~ql~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 296 (345)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.++.++|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~-- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS--LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN-- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT--SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--
T ss_pred cCCCCCCCHHHHHHHh--cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--
Confidence 489999986 6 7999999987 4689999999995 568999998667899999999999997653
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHH-hhc-----ccccccC
Q 019181 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVC-DVI-----EYIFWRS 342 (345)
Q Consensus 297 ~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~-~~~-----~~~~~~~ 342 (345)
.....+||||||++++||++++++|++++. +.. .+.++|+
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~~~~~~~~~~C~ 256 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQYDNQQEGVVFDCD 256 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEEETTTTEEEEETT
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEEcCCCCEEEEECC
Confidence 124569999999999999999999999984 332 2556775
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.1e-42 Score=324.24 Aligned_cols=223 Identities=24% Similarity=0.386 Sum_probs=186.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (345)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|.. .++.|||++|+||+.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 57789999999999999999999999999999999987753 34799999999999864
Q ss_pred CCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 019181 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (345)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 228 (345)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+.. ....+||||||++..
T Consensus 71 -----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 -----GATWSISYGDGSSSSGDVYTDTVSVGGLT--------VTGQAVESAKKVSSSFTE--DSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHH--CTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EeeeEEEEEEecCccccc--cCCCceEEEecccccccc
Confidence 35799999999977999999999999754 568999999987553321 135799999999643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECCEEeeCCC
Q 019181 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (345)
Q Consensus 229 ------s~~~ql~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (345)
+++++|+++ | +++||+||.+ ...|.|+|||+|+ +++.|+|+.++.++|.|.+++|+|+++.+. .
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~ 210 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--S 210 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--E
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--C
Confidence 488999986 7 7999999987 4689999999996 468999998667899999999999987653 1
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH-hhc-----ccccccC
Q 019181 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVC-DVI-----EYIFWRS 342 (345)
Q Consensus 298 ~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~-~~~-----~~~~~~~ 342 (345)
....+||||||++++||++++++|++++. +.. .+.++|+
T Consensus 211 ------~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~ 255 (329)
T 1oew_A 211 ------TSIDGIADTGTTLLYLPATVVSAYWAQVSGAKSSSSVGGYVFPCS 255 (329)
T ss_dssp ------EEEEEEECTTCCSEEECHHHHHHHHTTSTTCEEETTTTEEEEETT
T ss_pred ------CCceEEEeCCCCCEECCHHHHHHHHHhCCCcEEcCCCCEEEEECC
Confidence 23469999999999999999999999984 332 2556775
No 19
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=6.4e-42 Score=320.72 Aligned_cols=224 Identities=24% Similarity=0.364 Sum_probs=190.4
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC--CCCCCCC--CCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPRR--SSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~--C~~C~~~--~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
.++.|+++|.||||+|++.|++||||+++||++.. |..|..+ ...|..++.|||++|+|++.+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDL------------- 76 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEE-------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeec-------------
Confidence 46789999999999999999999999999999875 7655432 234555789999999999985
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (345)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 77 ---------NTPFKIGYGDGSSSQGTLYKDTVGFGGVS--------IKNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ---------EEEEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ---------CCeEEEEecCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEccC---------CCccEEEecCcc
Confidence 35789999999977999999999999854 5589999998763 368999999986
Q ss_pred -------CcHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECCEEee
Q 019181 228 -------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (345)
Q Consensus 228 -------~s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 294 (345)
.+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.+++|.|+++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEec
Confidence 4799999999999 79999999875 4579999999986 458999997 44699999999999999875
Q ss_pred CCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhcc--------cccccCC
Q 019181 295 LPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVIE--------YIFWRSS 343 (345)
Q Consensus 295 ~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~~--------~~~~~~~ 343 (345)
.+ ...+||||||++++||++++++|++++++... +.++|+.
T Consensus 210 ~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~ 258 (342)
T 3pvk_A 210 TD--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVDCNL 258 (342)
T ss_dssp EE--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEECSCC
T ss_pred CC--------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEEecCC
Confidence 32 24599999999999999999999999987652 6677764
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=8.7e-42 Score=319.44 Aligned_cols=216 Identities=23% Similarity=0.348 Sum_probs=184.7
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCC-----CCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI-----QCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~-----~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 146 (345)
.+..|+++|.||||+|++.|+|||||+++||++. .|..|.. ++.|||++|+||+.+
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~------------ 70 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS-------SGTFTPSSSSSYKNL------------ 70 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT-------TCCBCGGGCTTCEEE------------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC-------CCcCCCccCcceeeC------------
Confidence 4578999999999999999999999999999954 4445543 489999999999985
Q ss_pred CCCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCC
Q 019181 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKS 226 (345)
Q Consensus 147 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~ 226 (345)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++...+ .+||||||++
T Consensus 71 ----------~~~~~i~Yg~gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~---------~~GilGLg~~ 123 (339)
T 3fv3_A 71 ----------GAAFTIRYGDGSTSQGTWGKDTVTINGVS--------ITGQQIADVTQTSV---------DQGILGIGYT 123 (339)
T ss_dssp ----------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEESS---------SSCEEECSCG
T ss_pred ----------CceEEEEECCCceEEEEEEEEEEEECCEE--------ECceEEEEEEecCC---------CceeEEecCc
Confidence 35789999999878999999999999854 56899999998643 5899999997
Q ss_pred CC----------------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCC----CCceEecCCCCCCceEEEEe
Q 019181 227 NS----------------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMT 284 (345)
Q Consensus 227 ~~----------------s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~ 284 (345)
.. +|+++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~ 202 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVT-SSQALTISLA 202 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBC-CSSSCEEEEE
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecc-cCccEEEEEE
Confidence 53 389999999999 79999999875 4589999999986 458999997 4569999999
Q ss_pred EEEECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhcc--------cccccCC
Q 019181 285 AVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVIE--------YIFWRSS 343 (345)
Q Consensus 285 ~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~~--------~~~~~~~ 343 (345)
+|.|+++.+... ..++|||||++++||++++++|++++++... +.++|+.
T Consensus 203 ~i~v~g~~~~~~---------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~ 260 (339)
T 3fv3_A 203 SVNLKGSSFSFG---------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNT 260 (339)
T ss_dssp EEEESSCEEEEE---------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEECTTC
T ss_pred EEEECCEeecCC---------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEEecCC
Confidence 999999887532 4599999999999999999999999997653 5567764
No 21
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1e-41 Score=326.05 Aligned_cols=241 Identities=22% Similarity=0.357 Sum_probs=189.6
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCC--
Q 019181 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP-- 148 (345)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~-- 148 (345)
+.++.|+++|.||||+|++.|+|||||+++||+|..| .+|+||+.++|.++.|.......
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~~C~~~~~~~c~ 79 (403)
T 3aup_A 18 GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHSTQCSRANTHQCL 79 (403)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBHHHHHTTCCCEE
T ss_pred CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCccccCccccCcc
Confidence 4678999999999999999999999999999998653 47899999999999998765432
Q ss_pred ------CCCCCCCCCCCCceeeC-CCCcEEEEEEEEEEEEecccCCcc---ccccCceeEEeeeeeccCC-CCCCCCCCc
Q 019181 149 ------LTDCTANTSCPYLEIYG-DGSSTTGYFVQDVVQYDKVSGDLQ---TTSTNGSLIFGCGARQSGN-LDSTNEEAL 217 (345)
Q Consensus 149 ------~~~C~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~i~~~~~~~~---~~~~~~~~~fg~~~~~~~~-~~~~~~~~~ 217 (345)
...|. ++.|.|.+.|+ +|+.+.|.+++|+|+|++..+.++ ....++++.|||+...... +.. ...
T Consensus 80 ~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~---~~~ 155 (403)
T 3aup_A 80 SCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLP---RNT 155 (403)
T ss_dssp ECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSS---TTC
T ss_pred ccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCC---CCC
Confidence 23453 35799999998 777789999999999998543210 0124678999999987543 322 568
Q ss_pred ceeeecCCCCCcHHHHhhhcCCCCCceEEeecCC-CCcceEEeCCCCC-------C-----CceEecCCCC-CCceEEEE
Q 019181 218 DGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ-------P-----EVNKTPLVPN-QPHYSINM 283 (345)
Q Consensus 218 ~GilGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~~-~~~G~l~~Gg~d~-------~-----~~~~~p~~~~-~~~w~v~l 283 (345)
+||||||++..+++.||.+..+.+++||+||.+. ..+|.|+||+ |+ + ++.|+|++.+ .++|.|.|
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l 234 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRV 234 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEE
Confidence 9999999999999999976544489999999885 5689999999 63 3 7899999865 37999999
Q ss_pred eEEEECCEEe-eCCCcccc--cCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 019181 284 TAVQVGLDFL-NLPTDVFG--VGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDV 334 (345)
Q Consensus 284 ~~i~v~~~~~-~~~~~~~~--~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~ 334 (345)
++|+|+++.+ .++...+. ..+...+||||||++++||++++++|+++|.+.
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~ 288 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQ 288 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHT
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHH
Confidence 9999999988 66554442 123456999999999999999999999999654
No 22
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.2e-42 Score=326.23 Aligned_cols=219 Identities=21% Similarity=0.374 Sum_probs=186.8
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 117 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI-------KNLYDSSKSKSYEKD------------- 117 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG-------SCCBCGGGCTTCEEE-------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC-------CCcCCCccCCceEEC-------------
Confidence 457889999999999999999999999999999999986 4543 479999999999984
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeee----ccCCCCCCCCCCcceeeec
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GilGL 223 (345)
+|.|.+.|++|+ +.|.+++|+|+|++.. +++ .|||+.. .. .|.. ...+|||||
T Consensus 118 ---------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~-~Fg~~~~~~~~~~-~f~~---~~~dGilGL 174 (375)
T 1miq_A 118 ---------GTKVDITYGSGT-VKGFFSKDLVTLGHLS--------MPY-KFIEVTDTDDLEP-IYSS---VEFDGILGL 174 (375)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEE-EEEEEEECGGGTT-HHHH---SCCCEEEEC
T ss_pred ---------CcEEEEEeCCCe-EEEEEEEEEEEEcCce--------ECc-EEEEEEecccccc-cccc---CCCceEEeC
Confidence 467999999999 5999999999999754 458 9999998 43 3322 467999999
Q ss_pred CCCCC------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCE
Q 019181 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (345)
Q Consensus 224 g~~~~------s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (345)
|++.. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. ..++|.|.++ |+|+++
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQ 252 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCE
Confidence 99764 589999999999 79999999885 35899999999964 58999997 5689999999 999998
Q ss_pred EeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhcc-----cccccCC
Q 019181 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVIE-----YIFWRSS 343 (345)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~~-----~~~~~~~ 343 (345)
.+ ....+||||||+++++|.+++++|++++++..+ +.++|+.
T Consensus 253 ~~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~ 299 (375)
T 1miq_A 253 TM----------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDN 299 (375)
T ss_dssp EE----------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTC
T ss_pred Ec----------ccceEEecCCCccEEcCHHHHHHHHHHhCCcccCCCCeEEEECCC
Confidence 76 134699999999999999999999999987432 5667764
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=6.3e-42 Score=330.25 Aligned_cols=218 Identities=20% Similarity=0.320 Sum_probs=187.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
++.+..|+++|.||||+|++.|++||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 133 n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~-------~~~ydps~SsT~~~~------------- 192 (451)
T 3qvc_A 133 DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES-------KNHYDSSKSKTYEKD------------- 192 (451)
T ss_dssp GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT-------SCCBCGGGCTTCEEE-------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC-------CCCCCCCCCcccccC-------------
Confidence 567889999999999999999999999999999999994 5654 379999999999973
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeee----ccCCCCCCCCCCcceeeec
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GilGL 223 (345)
+|.|.+.|++|+ +.|.+++|+|++++.. ++ +.|||++. .++ |.. ...+|||||
T Consensus 193 ---------~~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f~~---~~~dGILGL 249 (451)
T 3qvc_A 193 ---------DTPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-YSE---SDVDGVFGL 249 (451)
T ss_dssp ---------EEEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-HHH---SCCCEEEEC
T ss_pred ---------CCEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-ccC---CCCCEEEec
Confidence 467999999999 6999999999998754 56 99999998 544 432 467999999
Q ss_pred CCCC------CcHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCE
Q 019181 224 GKSN------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (345)
Q Consensus 224 g~~~------~s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (345)
|++. .+++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. +.++|.|.++ |+|+++
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV 327 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc
Confidence 9975 3699999999999 79999999986 34899999999974 58999997 6789999999 999987
Q ss_pred EeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc-----ccccccC
Q 019181 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI-----EYIFWRS 342 (345)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~-----~~~~~~~ 342 (345)
. .....+++||||+++++|++++++|++++++.. .+.++|+
T Consensus 328 -~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~~~g~y~v~C~ 373 (451)
T 3qvc_A 328 -S---------SKKANVILDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCG 373 (451)
T ss_dssp -E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECTTSSCEEEETT
T ss_pred -c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeecCCCCeEEeeCC
Confidence 1 124569999999999999999999999998754 2567886
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.5e-41 Score=316.52 Aligned_cols=223 Identities=15% Similarity=0.194 Sum_probs=188.1
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
++.+..|+++|.|| +|++.|+|||||+++||+|..|. .|.. ..++.|||++| ||+..
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----~~~~~y~~~~S-T~~~~------------- 71 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVC-----PNLQKYEKLKP-KYISD------------- 71 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGS-----TTCCCCCCSSC-EEEEE-------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcc-----cccCccCCCCC-ceEEC-------------
Confidence 56678999999999 89999999999999999999997 5721 12379999999 99873
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (345)
++.|.+.|++|+. .|.+++|+|+|++.. ++++.|||++.....|.. ...+||||||++.
T Consensus 72 ---------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------~~~~~fg~~~~~~~~f~~---~~~~GilGLg~~~ 130 (330)
T 1yg9_A 72 ---------GNVQVKFFDTGSA-VGRGIEDSLTISQLT--------TSQQDIVLADELSQEVCI---LSADVVVGIAAPG 130 (330)
T ss_dssp ---------EEEEEEETTTEEE-EEEEEEEEEEETTEE--------EEEEEEEEEEEECTHHHH---TTCSEEEECSCTT
T ss_pred ---------CCEEEEEECCceE-EEEEEEEEEEECCEE--------EcCeEEEEEEEccccccc---ccCceEEEcCcch
Confidence 4579999999986 999999999999754 558999999987433322 4679999999987
Q ss_pred Cc-------HHHHhhhcCCCCCceEEeecCC-CC--cceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEEe
Q 019181 228 SS-------MISQLASSGGVRKMFAHCLDGI-NG--GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (345)
Q Consensus 228 ~s-------~~~ql~~~g~i~~~Fs~~l~~~-~~--~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (345)
.+ ++++|++||+|+++||+||.+. .. .|.|+|||+|+. ++.|+|+. ..++|.|.+++|+|+++.+
T Consensus 131 ~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 131 CPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp SCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEE
T ss_pred hccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEE
Confidence 55 9999999998889999999885 23 799999999974 58899997 6789999999999999876
Q ss_pred eCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc------cc-ccccCC
Q 019181 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI------EY-IFWRSS 343 (345)
Q Consensus 294 ~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~------~~-~~~~~~ 343 (345)
. ..+..+||||||+++++|++++++|++++++.. .| .++|+.
T Consensus 210 ~--------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~g~~~~~~~~C~~ 258 (330)
T 1yg9_A 210 A--------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEKTTTRRICKLDCSK 258 (330)
T ss_dssp E--------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEECSSCEEEEECGGG
T ss_pred c--------CCCcEEEEecCCccccCCHHHHHHHHHHhCCcccCCCceEEEEEECCC
Confidence 4 124569999999999999999999999998754 35 677864
No 25
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=8.2e-41 Score=324.53 Aligned_cols=219 Identities=22% Similarity=0.275 Sum_probs=182.9
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (345)
.+..|+++|.||||+|+|+|+|||||+++||+|..| |.. ++.|||++|+||+..
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~-------~~~y~~~~SsT~~~~----------------- 125 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDL----------------- 125 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEE-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc-------CCcccCCCCCCcccC-----------------
Confidence 455899999999999999999999999999999987 432 379999999999984
Q ss_pred CCCCCCCCCceeeCCCCcEEEEEEEEEEEEecc-cCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCC---
Q 019181 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKV-SGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (345)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~-~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~--- 227 (345)
.|.|.+.|++|+. .|.+++|+|+|++. .. ...+.|+++......|.. ....+||||||++.
T Consensus 126 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~dGIlGLg~~~~s~ 190 (455)
T 3lpj_A 126 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNV-------TVRANIAAITESDKFFIN--GSNWEGILGLAYAEIAR 190 (455)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSC-------EEEEEEEEEEEEESCSCT--TCCCCEEEECSCGGGCS
T ss_pred -----CccEEEEeCCeEE-EEEEEEEEEEECCCcce-------eeEEEEEEEEccCccccc--CCCcceEEEeCcccccc
Confidence 4679999999996 99999999999852 11 113668888877654431 25689999999964
Q ss_pred -----CcHHHHhhhcCCCCCceEEeecCC-----------CCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEE
Q 019181 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (345)
Q Consensus 228 -----~s~~~ql~~~g~i~~~Fs~~l~~~-----------~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (345)
.+|+++|++|+.|.++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.+++|+
T Consensus 191 ~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 269 (455)
T 3lpj_A 191 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 269 (455)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred ccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEE
Confidence 468999999999988999999752 45799999999974 58899987 4689999999999
Q ss_pred ECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc
Q 019181 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI 335 (345)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~ 335 (345)
|+++.+.++...+ ....+||||||++++||.+++++|+++|++..
T Consensus 270 v~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~ 314 (455)
T 3lpj_A 270 INGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 314 (455)
T ss_dssp ETTEECCCCGGGG---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHT
T ss_pred ECCEEcccccccc---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhc
Confidence 9999887654432 24579999999999999999999999999874
No 26
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.1e-41 Score=328.29 Aligned_cols=220 Identities=21% Similarity=0.365 Sum_probs=185.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 147 (345)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~-------~~~ydps~SsT~~~~------------- 193 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT-------KHLYDSSKSRTYEKD------------- 193 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG-------SCCBCGGGCTTCEEE-------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC-------CCcCCCccCCceeEC-------------
Confidence 456789999999999999999999999999999999986 4543 479999999999984
Q ss_pred CCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeecc--CC-CCCCCCCCcceeeecC
Q 019181 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQS--GN-LDSTNEEALDGIIGFG 224 (345)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~--~~-~~~~~~~~~~GilGLg 224 (345)
+|.|.+.|++|+ +.|.+++|+|++++.. ++ +.|||++... +. |. ....+||||||
T Consensus 194 ---------~~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f~---~~~~dGIlGLg 251 (453)
T 2bju_A 194 ---------GTKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTYT---ASTFDGILGLG 251 (453)
T ss_dssp ---------EEEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHHH---HSSCCEEEECS
T ss_pred ---------CcEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCcccc---ccCCceeEecc
Confidence 467999999999 5999999999998753 56 9999999876 32 21 14679999999
Q ss_pred CCC------CcHHHHhhhcCCC-CCceEEeecCC-CCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEE
Q 019181 225 KSN------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDF 292 (345)
Q Consensus 225 ~~~------~s~~~ql~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~ 292 (345)
++. .+++++|++||+| +++||+||.+. ..+|.|+|||+|+. ++.|+|+. ..++|.|.++ |+|+++
T Consensus 252 ~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg~- 328 (453)
T 2bju_A 252 WKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGNI- 328 (453)
T ss_dssp CGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETTE-
T ss_pred CCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECcE-
Confidence 965 3689999999999 79999999885 35799999999964 58999997 5689999999 999993
Q ss_pred eeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc-----ccccccCC
Q 019181 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI-----EYIFWRSS 343 (345)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~-----~~~~~~~~ 343 (345)
+ + .+..+|+||||+++++|++++++|++++++.. .+.++|+.
T Consensus 329 ~-~--------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~~~g~~~~v~C~~ 375 (453)
T 2bju_A 329 M-L--------EKANCIVDSGTSAITVPTDFLNKMLQNLDVIKVPFLPFYVTLCNN 375 (453)
T ss_dssp E-E--------EEEEEEECTTCCSEEECHHHHHHHTTTSSCEECTTSSCEEEETTC
T ss_pred E-e--------ccccEEEcCCCCeEecCHHHHHHHHHHhCCcccCCCceEEEecCC
Confidence 3 1 23569999999999999999999999998642 35667763
No 27
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=314.86 Aligned_cols=221 Identities=25% Similarity=0.349 Sum_probs=181.4
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCC
Q 019181 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (345)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~ 150 (345)
..+..|+++|.||||+|++.|+|||||+++||+|..|..|. +.|||++|+||+..
T Consensus 10 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~---------------- 64 (383)
T 2ewy_A 10 DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSK---------------- 64 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEE----------------
T ss_pred CCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeC----------------
Confidence 34567999999999999999999999999999999887663 68999999999985
Q ss_pred CCCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCCC--
Q 019181 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (345)
Q Consensus 151 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~-- 228 (345)
.|.|.+.|++|+. .|.+++|+|+|++.... ...+.|++.....+.|.. ....+||||||++..
T Consensus 65 ------~~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~dGilGLg~~~~s~ 129 (383)
T 2ewy_A 65 ------GFDVTVKYTQGSW-TGFVGEDLVTIPKGFNT------SFLVNIATIFESENFFLP--GIKWNGILGLAYATLAK 129 (383)
T ss_dssp ------EEEEEEECSSCEE-EEEEEEEEEEETTTEEE------EEEEEEEEEEEEESCSCT--TCCCCEEEECSCGGGCS
T ss_pred ------CceEEEEECCcEE-EEEEEEEEEEECCCccc------eeEEEEEEEEeecceeec--cCcCceEEecCchhccc
Confidence 4578999999985 99999999999863210 124668887765554421 246799999999653
Q ss_pred ------cHHHHhhhcCCCCCceEEeecC--------CCCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECC
Q 019181 229 ------SMISQLASSGGVRKMFAHCLDG--------INGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGL 290 (345)
Q Consensus 229 ------s~~~ql~~~g~i~~~Fs~~l~~--------~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~ 290 (345)
+++++|++|+.|+++||+||.+ ....|.|+|||+|+ +++.|+|+. ...+|.|.+++|+|++
T Consensus 130 ~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g 208 (383)
T 2ewy_A 130 PSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGG 208 (383)
T ss_dssp SCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETT
T ss_pred ccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECC
Confidence 5899999999998899999963 14579999999985 568999997 4589999999999999
Q ss_pred EEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc
Q 019181 291 DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI 335 (345)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~ 335 (345)
+.+.++...+. ...+||||||++++||++++++|++++++..
T Consensus 209 ~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~ 250 (383)
T 2ewy_A 209 QSLNLDCREYN---ADKAIVDSGTTLLRLPQKVFDAVVEAVARAS 250 (383)
T ss_dssp EECCCCTTTTT---SSCEEECTTCSSEEEEHHHHHHHHHHHHHTT
T ss_pred EEccccccccC---CccEEEEcCCccccCCHHHHHHHHHHHhhhc
Confidence 98876544332 4569999999999999999999999999864
No 28
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-40 Score=308.80 Aligned_cols=220 Identities=22% Similarity=0.330 Sum_probs=182.9
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (345)
.+..|+++|.|| +|++.|+|||||+++||+|..|..|.. ..++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c-----~~~~~y~~~~Ss-~~~------------------ 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQ-----TGHDLYTPSSSA-TKL------------------ 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHH-----TTSCCCBCCSSC-EEC------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCcccc-----CCCCCCCchhcC-Ccc------------------
Confidence 577899999999 899999999999999999999987642 234799999998 543
Q ss_pred CCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 019181 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (345)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 228 (345)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+...++.+.. ....+||||||++..
T Consensus 66 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 ----SGYSWDISYGDGSSASGDVYRDTVTVGGVT--------TNKQAVEAASKISSEFVQ--DTANDGLLGLAFSSINTV 131 (325)
T ss_dssp ----TTCBEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHT--STTCCEEEECSCGGGCCC
T ss_pred ----CCCEEEEEeCCCCEEEEEEEEeEEEECCEE--------EcceEEEEEEecCccccc--cCCCceEEEeCccccccc
Confidence 467899999999977999999999999754 558999999987553321 146799999999643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECCEEeeCCC
Q 019181 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (345)
Q Consensus 229 ------s~~~ql~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (345)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.++.++|.|.+++|+|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~--- 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ--LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS--- 205 (325)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB---
T ss_pred CcCCCCCHHHHHHHh--cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc---
Confidence 488999987 6 7999999987 4689999999995 568999998667899999999999987653
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHH-Hhhc-----ccccccC
Q 019181 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKV-CDVI-----EYIFWRS 342 (345)
Q Consensus 298 ~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i-~~~~-----~~~~~~~ 342 (345)
.....+||||||++++||++++++|++++ ++.. .+.++|+
T Consensus 206 -----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~~~~g~~~~~C~ 251 (325)
T 1ibq_A 206 -----SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQESYEAGGYVFSCS 251 (325)
T ss_dssp -----SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBCCSSSSSCEEETT
T ss_pred -----CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceEcCcCCeEEEEcC
Confidence 23457999999999999999999999999 4433 2556775
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=6.6e-40 Score=312.80 Aligned_cols=219 Identities=22% Similarity=0.278 Sum_probs=181.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (345)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|. +.|||++|+||+..
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~---------~~y~~~~SsT~~~~----------------- 72 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH---------RYYQRQLSSTYRDL----------------- 72 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS---------CCCCGGGCTTCEEE-----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc---------CCcCcccCCCceeC-----------------
Confidence 4568999999999999999999999999999999886553 68999999999984
Q ss_pred CCCCCCCCCceeeCCCCcEEEEEEEEEEEEe-cccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCC---
Q 019181 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYD-KVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (345)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~-~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~--- 227 (345)
.|.|.+.|++|+. .|.+++|+|+|+ +.... ..+.|++.....+.|.. ....+||||||++.
T Consensus 73 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~-------~~~~~~~~~~~~~~f~~--~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 73 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFIN--GSNWEGILGLAYAEIAR 137 (395)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSCT--TCCCCEEEECSCGGGCS
T ss_pred -----CceEEEEECCcEE-EEEEEeEEEEECCCCCce-------EEEEEEEEEccCccccc--ccCccceEEcCchhhcc
Confidence 4578999999986 999999999998 33221 13667877765554421 24689999999964
Q ss_pred -----CcHHHHhhhcCCCCCceEEeecCC-----------CCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEE
Q 019181 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (345)
Q Consensus 228 -----~s~~~ql~~~g~i~~~Fs~~l~~~-----------~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (345)
.+++++|++|+.|+++||+||.+. ...|.|+|||+|+. ++.|+|+. +..+|.|.+++|+
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 368999999999988999999752 35799999999964 58899997 4689999999999
Q ss_pred ECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc
Q 019181 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI 335 (345)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~ 335 (345)
|+++.+.++...+. ...+||||||++++||++++++|+++|++..
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~ 261 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 261 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHT
T ss_pred ECCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhc
Confidence 99998876544332 3569999999999999999999999999864
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.3e-39 Score=311.49 Aligned_cols=219 Identities=22% Similarity=0.277 Sum_probs=179.9
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (345)
.+..|+++|.||||+|+++|+|||||+++||+|..| |.. ++.|||++|+||+..
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~-------~~~y~~~~SsT~~~~----------------- 79 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDL----------------- 79 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEE-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc-------cCCcCcccCcccccC-----------------
Confidence 346899999999999999999999999999999987 432 378999999999984
Q ss_pred CCCCCCCCCceeeCCCCcEEEEEEEEEEEEec-ccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCC---
Q 019181 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (345)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~--- 227 (345)
.|.|.+.|++|+. .|.+++|+|+|++ .... ..+.|+++....+.+.. ....+||||||++.
T Consensus 80 -----~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 80 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFIN--GSNWEGILGLAYAEIAR 144 (402)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSCT--TCCCCEEEECSCGGGCS
T ss_pred -----CCEEEEEECcEEE-EEEEEEEEEEECCccccc-------eeeeEEEEEcccccccc--CCCccceEEcCchhhcc
Confidence 4679999999995 9999999999984 2211 13457887776654421 25689999999864
Q ss_pred -----CcHHHHhhhcCCCCCceEEeecCC-----------CCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEE
Q 019181 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (345)
Q Consensus 228 -----~s~~~ql~~~g~i~~~Fs~~l~~~-----------~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (345)
.+++++|++|+.|.++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.+++|+
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEE
Confidence 469999999999988999999642 34799999999974 57899997 4689999999999
Q ss_pred ECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc
Q 019181 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI 335 (345)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~ 335 (345)
|+++.+.++...+ +...+||||||++++||.+++++|+++|++..
T Consensus 224 v~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~ 268 (402)
T 3vf3_A 224 INGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 268 (402)
T ss_dssp ETTEECCCCGGGG---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHT
T ss_pred ECCEEeccccccc---CCCeEEEECCCCcccCCHHHHHHHHHHHhhhc
Confidence 9999887654432 24569999999999999999999999999884
No 31
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=4.9e-40 Score=305.47 Aligned_cols=219 Identities=25% Similarity=0.360 Sum_probs=181.2
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (345)
.+..|+++|.|| +|++.|+|||||+++||+|..|..|.. ..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c-----~~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSER-----SGHDYYTPGSSA-QKI------------------ 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHH-----TTCCCBCCCTTC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccc-----cCCCCCCccccC-Ccc------------------
Confidence 567899999999 899999999999999999999987632 234799999998 553
Q ss_pred CCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCCC---
Q 019181 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (345)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 228 (345)
++|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+.. ....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 ----DGATWSISYGDGSSASGDVYKDKVTVGGVS--------YDSQAVESAEKVSSEFTQ--DTANDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHH--CTTCCEEEECSCGGGCCC
T ss_pred ----CCCeEEEEcCCCCeEEEEEEEEEEEECCEE--------ECceEEEEEEeccccccc--cCCCceEEecCccccccc
Confidence 357899999999977999999999999754 558999999987543321 135799999999643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCCCCC----CceEecCCCCCCceEEEEeEEEECCEEeeCCC
Q 019181 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (345)
Q Consensus 229 ------s~~~ql~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (345)
+++++|+++ | +++||+||.+ +..|.|+|||+|+. ++.|+|+.++.++|.|.+++|+|++ .+.
T Consensus 133 ~p~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~--- 205 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS--LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS--- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE---
T ss_pred CCCCCCCHHHHHHHh--ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc---
Confidence 488999987 6 7999999987 46899999999975 4789999766789999999999999 442
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH-hhc-----ccccccC
Q 019181 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVC-DVI-----EYIFWRS 342 (345)
Q Consensus 298 ~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~-~~~-----~~~~~~~ 342 (345)
.....+|+||||+++++|++++++|++++. +.. .+.++|+
T Consensus 206 -----~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~~~~g~~~~~C~ 251 (323)
T 1izd_A 206 -----SDSITGIADTGTTLLLLDDSIVDAYYEQVNGASYDSSQGGYVFPSS 251 (323)
T ss_dssp -----CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEEETTTTEEEEETT
T ss_pred -----CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEEcCcCCEEEEECC
Confidence 234579999999999999999999999995 332 2567776
No 32
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.4e-39 Score=306.41 Aligned_cols=232 Identities=20% Similarity=0.361 Sum_probs=179.5
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~ 149 (345)
++.+..|+++|.|||| |+|||||+++||+|..|. +|+.++|+++.|........
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCC
Confidence 4567899999999998 999999999999986541 24456677777765443333
Q ss_pred CCCCC--------CCCC-CCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccC-CCCCCCCCCcce
Q 019181 150 TDCTA--------NTSC-PYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDG 219 (345)
Q Consensus 150 ~~C~~--------~~~~-~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~G 219 (345)
..|.. +..| .|.+.|++|+.+.|.+++|+|++++..+.........++.|||+..... .+ . ...||
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~---~~~dG 139 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-P---RGSTG 139 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-C---TTEEE
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-C---CCCce
Confidence 34542 2456 5999999999779999999999997532211000011246899987622 12 1 56899
Q ss_pred eeecCCCCCcHHHHhhhcCCCCCceEEeecCCCCcceEEeCCCCC------CCceEecCCCC--CCceEEEEeEEEECCE
Q 019181 220 IIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQ------PEVNKTPLVPN--QPHYSINMTAVQVGLD 291 (345)
Q Consensus 220 ilGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~~~~~G~l~~Gg~d~------~~~~~~p~~~~--~~~w~v~l~~i~v~~~ 291 (345)
|||||++..|++.||.++++++++||+||.+. .+|.|+||++|. +++.|+|++.+ ..+|+|.|++|+|+++
T Consensus 140 IlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~ 218 (381)
T 1t6e_X 140 VAGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDT 218 (381)
T ss_dssp EEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTE
T ss_pred EEEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCE
Confidence 99999999999999999996689999999884 689999999874 46999999864 2578899999999999
Q ss_pred EeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc
Q 019181 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI 335 (345)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~ 335 (345)
.+.++...+. ...+||||||++++||+++|++|.++|.+..
T Consensus 219 ~~~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~ 259 (381)
T 1t6e_X 219 RVPVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL 259 (381)
T ss_dssp ECCCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHH
T ss_pred EecCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhh
Confidence 8876655442 4569999999999999999999999998754
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=5.7e-40 Score=305.09 Aligned_cols=218 Identities=24% Similarity=0.366 Sum_probs=180.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCCC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (345)
.+..|+++|.|| +|++.|+|||||+++||+|..|..|.. ..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c-----~~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQ-----SGHSVYNPSATG-KEL------------------ 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHH-----TTSCCBCHHHHC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhc-----cCCCCCCcccCC-ccc------------------
Confidence 567899999999 899999999999999999999987642 234799999998 653
Q ss_pred CCCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCC----
Q 019181 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN---- 227 (345)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~---- 227 (345)
++|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+.. ....+||||||++.
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 ----SGYTWSISYGDGSSASGNVFTDSVTVGGVT--------AHGQAVQAAQQISAQFQQ--DTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHT--CTTCSEEEECSCGGGCCC
T ss_pred ----CCCeEEEEeCCCCeEEEEEEEEEEEECCEE--------ECcEEEEEEEecCccccc--CCCCceEEEeCccccccc
Confidence 357899999999977999999999999754 558999999987553321 14579999999964
Q ss_pred -----CcHHHHhhhcCCC-CCceEEeecCCCCcceEEeCCCCC----CCceEecCCCCCCceEEEEeEEEECCEEeeCCC
Q 019181 228 -----SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (345)
Q Consensus 228 -----~s~~~ql~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (345)
.+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.++.++|.|.+++|+|++ ..
T Consensus 133 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~---- 204 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS--LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS---- 204 (323)
T ss_dssp BSSCCCCHHHHHGGG--BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE----
T ss_pred ccCCCCCHHHHHHHh--cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc----
Confidence 3589999987 6 7999999987 4689999999995 56899999867789999999999998 21
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHH-Hhhc-----ccccccC
Q 019181 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKV-CDVI-----EYIFWRS 342 (345)
Q Consensus 298 ~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i-~~~~-----~~~~~~~ 342 (345)
.....+||||||+++++|++++++|+++| ++.. .+.++|+
T Consensus 205 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~ 250 (323)
T 1bxo_A 205 -----GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDSNAGGYVFDCS 250 (323)
T ss_dssp -----EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEEETTTTEEEECTT
T ss_pred -----CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceEcCcCCEEEEECC
Confidence 12356999999999999999999999999 4432 2557776
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.5e-39 Score=300.06 Aligned_cols=206 Identities=23% Similarity=0.407 Sum_probs=174.3
Q ss_pred ceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCCcccCCCCCCCCCCC
Q 019181 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDC 152 (345)
Q Consensus 73 ~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~C 152 (345)
+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++.
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~-------------------- 55 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSAT-------------------- 55 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEE--------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCcccc--------------------
Confidence 468999999999999999999999999999763 479998887643
Q ss_pred CCCCCCCCceeeCCCCcEEEEEEEEEEEEecccCCccccccCceeEEeeeeeccCCCCCCCCCCcceeeecCCCCC----
Q 019181 153 TANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS---- 228 (345)
Q Consensus 153 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~---- 228 (345)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ | ...+||||||++..
T Consensus 56 ----~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~--------v~~~~fg~~~~~~~-~-----~~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 56 ----SDKVSVTYGSGS-FSGTEYTDTVTLGSLT--------IPKQSIGVASRDSG-F-----DGVDGILGVGPVDLTVGT 116 (340)
T ss_dssp ----EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEES-C-----TTCSEEEECSCGGGGTTS
T ss_pred ----CceEEEEECCcE-EEEEEEEEEEEECCEE--------EcceEEEEEEccCC-C-----cCCCcEEECCcccccccc
Confidence 367999999998 6999999999998754 56899999998765 3 24799999998643
Q ss_pred ----------cHHHHhhhcCCC-CCceEEeecCC----CCcceEEeCCCCC----CCceEecCCCC---CCceEEEEeEE
Q 019181 229 ----------SMISQLASSGGV-RKMFAHCLDGI----NGGGIFAIGHVVQ----PEVNKTPLVPN---QPHYSINMTAV 286 (345)
Q Consensus 229 ----------s~~~ql~~~g~i-~~~Fs~~l~~~----~~~G~l~~Gg~d~----~~~~~~p~~~~---~~~w~v~l~~i 286 (345)
+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+..+ ..+|.|. .+|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 579999999999 79999999863 3479999999996 57899999864 5799999 999
Q ss_pred EECC-EEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhcc-----cccccC
Q 019181 287 QVGL-DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVIE-----YIFWRS 342 (345)
Q Consensus 287 ~v~~-~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~~-----~~~~~~ 342 (345)
+|++ +.+.. ...+||||||++++||.+++++|.+++++..+ +.++|+
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~~g~~~~~C~ 248 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVADNNTGLLRLTTA 248 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEECTTTSSEEECHH
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCCCCeEEeecc
Confidence 9998 77631 23599999999999999999999999987643 567775
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=1.3e-23 Score=159.48 Aligned_cols=84 Identities=39% Similarity=0.590 Sum_probs=75.2
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC----CCCCCCCCCccccccCCCCCCCcceecCCCcccCCCC
Q 019181 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (345)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C~----~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~ 145 (345)
++.+..|+++|.||||+|+|.|+|||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~-------~~~y~p~~SsT~~~~----------- 70 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI-------HHKYNSDKSSTYVKN----------- 70 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT-------SCCBCGGGCTTCEEE-----------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC-------CCCCCchhCCCceeC-----------
Confidence 557789999999999999999999999999999999986 4654 479999999999984
Q ss_pred CCCCCCCCCCCCCCCceeeCCCCcEEEEEEEEEEEEec
Q 019181 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK 183 (345)
Q Consensus 146 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~ 183 (345)
.|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 71 -----------~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 -----------GTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -----------EEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -----------CCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 467999999999 69999999999975
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.87 E-value=4e-22 Score=177.18 Aligned_cols=139 Identities=19% Similarity=0.301 Sum_probs=115.5
Q ss_pred CceeEEeeeeeccCC-CCCCCCCCcceeeecCCCCC------cHHHHhhhcCCC-CCceEEeecCCC-C--cceEEeCCC
Q 019181 194 NGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN-G--GGIFAIGHV 262 (345)
Q Consensus 194 ~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg~~~~------s~~~ql~~~g~i-~~~Fs~~l~~~~-~--~G~l~~Gg~ 262 (345)
++++.|||++..++. |.. ...|||||||++.. +++++|++||+| +++||+||.+.. . .|.|+|||+
T Consensus 5 v~~~~Fg~~~~~~~~~f~~---~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 5 VERQVFGEATKQPGITFIA---AKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp EEEEEEEEEEECCSSTTTS---CSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred ECCeEEEEEEEccCCcccc---ccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 568999999987653 332 57899999999753 589999999999 799999998862 2 799999999
Q ss_pred CCC----CceEecCCCCCCceEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhc---
Q 019181 263 VQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKVCDVI--- 335 (345)
Q Consensus 263 d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i~~~i~~~~--- 335 (345)
|+. ++.|+|+. +..+|.|.+++|+|+++.+.. .....+|+||||+++++|.+++++|++++++..
T Consensus 82 d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~-------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~ 153 (241)
T 1lya_B 82 DSKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTLC-------KEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQ 153 (241)
T ss_dssp CGGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEES-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEET
T ss_pred CHHHcCCceEEEECc-cccEEEEEEeEEEECCeeEec-------cCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccC
Confidence 974 58999997 568999999999999876421 235679999999999999999999999998754
Q ss_pred -ccccccCC
Q 019181 336 -EYIFWRSS 343 (345)
Q Consensus 336 -~~~~~~~~ 343 (345)
.+.++|+.
T Consensus 154 g~~~~~C~~ 162 (241)
T 1lya_B 154 GEYMIPCEK 162 (241)
T ss_dssp TEEEEEGGG
T ss_pred CcEEEECCC
Confidence 36678864
No 37
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=87.52 E-value=0.69 Score=34.06 Aligned_cols=28 Identities=25% Similarity=0.266 Sum_probs=24.6
Q ss_pred EEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 019181 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (345)
Q Consensus 77 ~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~ 106 (345)
++.+.|| +|.+.+++|||.+++-+...+
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 6789999 999999999999999986543
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=86.46 E-value=0.68 Score=34.44 Aligned_cols=27 Identities=22% Similarity=0.179 Sum_probs=24.3
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 019181 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (345)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~ 104 (345)
-++.+.|| +|.+.+++|||.+++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 46889999 9999999999999999873
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=85.30 E-value=0.76 Score=36.27 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=27.3
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 019181 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (345)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~ 104 (345)
..+.+++++.|+ ++++++++|||++.+.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 456789999999 8999999999999988864
No 40
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=84.74 E-value=1.1 Score=32.83 Aligned_cols=28 Identities=29% Similarity=0.191 Sum_probs=24.5
Q ss_pred EEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 019181 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (345)
Q Consensus 77 ~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~ 106 (345)
++.+.|| +|.+.+++|||.+++-+...+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 6789999 999999999999999986533
No 41
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=80.57 E-value=1.8 Score=34.01 Aligned_cols=29 Identities=7% Similarity=0.212 Sum_probs=24.3
Q ss_pred EEECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHH
Q 019181 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (345)
Q Consensus 286 i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i 327 (345)
+.|+|+.+. +++|||++.+.++.+..+.+
T Consensus 31 v~InG~~~~-------------~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEEE-------------EEEECCCCccccCHHHHHHc
Confidence 678888664 89999999999998877664
No 42
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=80.33 E-value=1.3 Score=35.14 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=24.7
Q ss_pred EEECCEEeeCCCcccccCCCccEEEcccccccccChHHHHHH
Q 019181 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (345)
Q Consensus 286 i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~~~i 327 (345)
++|||+.+. +++|||++.+.++.+..+++
T Consensus 29 ~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPLK-------------AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHc
Confidence 447888765 89999999999999988875
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=78.57 E-value=1.7 Score=34.39 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=27.2
Q ss_pred ceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 019181 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (345)
Q Consensus 73 ~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~ 105 (345)
...|+++..|. ++++++++|||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45689999998 99999999999999998664
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=77.60 E-value=2.1 Score=32.42 Aligned_cols=26 Identities=27% Similarity=0.189 Sum_probs=22.9
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 019181 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (345)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~ 104 (345)
=++ +.|| +|.+.+++|||.+++-+..
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 345 9999 9999999999999998864
No 45
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=76.80 E-value=2.1 Score=32.13 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=25.3
Q ss_pred EEEEEeC---CCCceEEEEEEcCCCeeeEeCCCC
Q 019181 77 YAKIGIG---TPPKDYYVQVDTGSDIMWVNCIQC 107 (345)
Q Consensus 77 ~~~i~vG---tP~q~~~v~~DTGS~~~wv~~~~C 107 (345)
.+.|.|| +|+|.+..++|||-+++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4556665 789999999999999999987554
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=72.99 E-value=3.5 Score=31.04 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=25.8
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeCCCC
Q 019181 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQC 107 (345)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~~C 107 (345)
=.+.+.|| +|.+..++|||-+++-+...+.
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 36789999 9999999999999999976543
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=69.39 E-value=5.5 Score=30.82 Aligned_cols=31 Identities=16% Similarity=0.050 Sum_probs=26.5
Q ss_pred ceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 019181 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (345)
Q Consensus 73 ~~~Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~~ 105 (345)
...-++.+.|+ +|.+.+++|||.+++-+...
T Consensus 20 ~~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 20 PPEPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp CCSSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred cCCCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 34568889999 99999999999999998654
No 48
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=67.49 E-value=4.4 Score=29.42 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=14.2
Q ss_pred EEEcccccccccChHH
Q 019181 308 TIIDSGTTLAYLPEMV 323 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~ 323 (345)
++||||++.+++|...
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (97)
T 1lya_A 30 VVFDTGSSNLWVPSIH 45 (97)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCCceEEeEcC
Confidence 9999999999998653
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=59.87 E-value=7.6 Score=32.36 Aligned_cols=27 Identities=26% Similarity=0.196 Sum_probs=24.2
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 019181 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (345)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~ 104 (345)
-.+.+.|| +|.+.+++|||.+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 47889999 9999999999999998854
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=59.45 E-value=9 Score=29.22 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=19.8
Q ss_pred eCCCCceEEEEEEcCCCeeeEeCCC
Q 019181 82 IGTPPKDYYVQVDTGSDIMWVNCIQ 106 (345)
Q Consensus 82 vGtP~q~~~v~~DTGS~~~wv~~~~ 106 (345)
+| +|.+..++|||-+++-+....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 66 788999999999999997644
No 51
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=57.38 E-value=6.7 Score=28.96 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=26.5
Q ss_pred ceEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccChHHH
Q 019181 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (345)
Q Consensus 278 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~ 324 (345)
.|+=.+..++|+|+... +++|||+-.+.+.....
T Consensus 5 l~~RP~v~v~I~Gq~~e-------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPLN-------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSSCCEEEEEETTEEEE-------------EEECTTCSSCEEEHHHH
T ss_pred ccCCCEEEEEECCEEEE-------------EEeccCCCcEEEccccC
Confidence 35555667899998764 89999999999986554
No 52
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=57.00 E-value=6.5 Score=28.77 Aligned_cols=30 Identities=13% Similarity=0.416 Sum_probs=24.1
Q ss_pred eEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccCh
Q 019181 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (345)
Q Consensus 279 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~ 321 (345)
|+-.+..++|+|+... +++|||+-.+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~e-------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEec
Confidence 5555667899998775 99999999988764
No 53
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=56.85 E-value=7.5 Score=29.32 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=26.0
Q ss_pred CceEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccCh
Q 019181 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (345)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~ 321 (345)
..|+=.+. ++|+|+.+. +++|||+-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~e-------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK-------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE-------------EEecCCCCcEEEcc
Confidence 35777778 999999775 99999999998875
No 54
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=54.56 E-value=7.7 Score=28.35 Aligned_cols=30 Identities=7% Similarity=0.166 Sum_probs=24.2
Q ss_pred ceEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccC
Q 019181 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLP 320 (345)
Q Consensus 278 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp 320 (345)
.|+-.+..++|+|+.+. +++|||+-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~e-------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE-------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE-------------EEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEEE-------------EEEecCCCceEEc
Confidence 45656777999999875 8999999988774
No 55
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=46.50 E-value=17 Score=28.00 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=22.4
Q ss_pred EEeEEEECCEEeeCCCcccccCCCccEEEcccccccccChH
Q 019181 282 NMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (345)
Q Consensus 282 ~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~ 322 (345)
.+..++|+|+.+. +++|||...+.|+..
T Consensus 23 P~v~i~I~G~~~~-------------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVGGQPVT-------------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEETTEEEE-------------EEECTTCSSCEECSC
T ss_pred CEEEEEECCEEEE-------------EEEeCCCCeEEEccc
Confidence 3455888998775 899999999998764
No 56
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=42.30 E-value=12 Score=33.51 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=13.3
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 29 VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEeCCCCceEEecC
Confidence 899999999999843
No 57
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=41.64 E-value=19 Score=31.95 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=26.7
Q ss_pred eEecCCCCCCceEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccChHHH
Q 019181 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (345)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~ 324 (345)
...|+. ....|.+ .|+||.+.+. +++|||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 7 TNTPTA-NDEEYIT---PVTIGGTTLN-------------LNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEEECG-GGSCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeecC-CCCEEEE---EEEECCEEEE-------------EEEeCCCcceEEecCCC
Confidence 344543 3445654 4667755553 89999999999997543
No 58
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=40.80 E-value=13 Score=33.26 Aligned_cols=15 Identities=20% Similarity=0.532 Sum_probs=13.4
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 29 VVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEcCCCCCEEEecC
Confidence 999999999999843
No 59
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=40.11 E-value=21 Score=31.72 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=26.6
Q ss_pred eEecCCCCCCceEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccChHHH
Q 019181 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (345)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~ 324 (345)
...|+. ....|.+ .|+||.+.+. +++|||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~---~i~iG~q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 7 TTNPTS-NDEEYIT---QVTVGDDTLG-------------LDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEECG-GGCCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeEcC-CCCEEEE---EEEECCEEEE-------------EEEcCCCcceEEecCCC
Confidence 344543 3445654 4667755543 89999999999997643
No 60
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=38.62 E-value=17 Score=32.56 Aligned_cols=14 Identities=21% Similarity=0.584 Sum_probs=13.0
Q ss_pred EEEcccccccccCh
Q 019181 308 TIIDSGTTLAYLPE 321 (345)
Q Consensus 308 ~i~DTGts~~~lp~ 321 (345)
++||||++.+++|.
T Consensus 29 v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 29 LLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEETTCCCCEECS
T ss_pred EEEeCCChhheecC
Confidence 99999999999985
No 61
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=38.07 E-value=21 Score=31.87 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=22.2
Q ss_pred CceEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccChH
Q 019181 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (345)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~ 322 (345)
..|.+ .|+||.+.+. +++|||++.+++|..
T Consensus 17 ~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAG---ITKIGNQNFL-------------TVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEE---EEEETTEEEE-------------EEEETTCCCEEEECT
T ss_pred CEEEE---EEEECCEEEE-------------EEEeCCCcceEEecC
Confidence 45654 4667755543 899999999999865
No 62
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=37.71 E-value=15 Score=32.84 Aligned_cols=15 Identities=27% Similarity=0.744 Sum_probs=13.4
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 29 VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEeCCCCCeEEecC
Confidence 999999999999843
No 63
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=37.63 E-value=36 Score=28.23 Aligned_cols=27 Identities=26% Similarity=0.196 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 019181 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (345)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGS~~~wv~~ 104 (345)
=.+++.+| +|.+..++|||.+++-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 46889999 8999999999999998854
No 64
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=37.32 E-value=21 Score=31.67 Aligned_cols=40 Identities=25% Similarity=0.268 Sum_probs=26.8
Q ss_pred eEecCCCCCCceEEEEeEEEECCEEeeCCCcccccCCCccEEEcccccccccChHHH
Q 019181 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (345)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~~~~ 324 (345)
..+|+. ....|.+ .|+||.+.+. +++|||++.+++|..-.
T Consensus 6 ~~~~~~-~~~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 6 VTTPQN-NDEEYLT---PVTVGKSTLH-------------LDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEECT-TTSCEEE---EEEEBTEEEE-------------EEEETTCCCEEEECTTS
T ss_pred EeEEcC-CCCEEEE---EEEECCEEEE-------------EEEeCCCccceEeeCCC
Confidence 344543 4456664 4667755553 89999999999987543
No 65
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=36.64 E-value=16 Score=32.57 Aligned_cols=15 Identities=27% Similarity=0.789 Sum_probs=13.4
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 29 VIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEECCCcceEEEcC
Confidence 899999999999753
No 66
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=35.10 E-value=28 Score=29.36 Aligned_cols=16 Identities=25% Similarity=0.667 Sum_probs=14.1
Q ss_pred EEEcccccccccChHH
Q 019181 308 TIIDSGTTLAYLPEMV 323 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~ 323 (345)
+++|||++.+++|..-
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (239)
T 1b5f_A 30 VIFDTGSSVLWVPSSK 45 (239)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCcceEEEcCC
Confidence 9999999999998643
No 67
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=32.36 E-value=25 Score=31.21 Aligned_cols=16 Identities=19% Similarity=0.617 Sum_probs=14.2
Q ss_pred EEEcccccccccChHH
Q 019181 308 TIIDSGTTLAYLPEMV 323 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~ 323 (345)
+++|||++.+++|..-
T Consensus 29 v~~DTGSs~lWv~~~~ 44 (329)
T 1htr_B 29 VLFDTGSSNLWVPSVY 44 (329)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEcCCCccEEEecCC
Confidence 9999999999998653
No 68
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=32.21 E-value=33 Score=30.43 Aligned_cols=17 Identities=12% Similarity=0.073 Sum_probs=14.9
Q ss_pred EEEcccccccccChHHH
Q 019181 308 TIIDSGTTLAYLPEMVY 324 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~~ 324 (345)
+++|||++.+++|..-.
T Consensus 32 v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 32 LDFDTGSSDLWVFSSET 48 (329)
T ss_dssp EEEETTCCCEEECBTTS
T ss_pred EEEcCCCCCeEEecCCC
Confidence 99999999999997643
No 69
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=31.40 E-value=35 Score=30.29 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=14.3
Q ss_pred EEEcccccccccChHH
Q 019181 308 TIIDSGTTLAYLPEMV 323 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~ 323 (345)
+++|||++.+++|..-
T Consensus 32 v~~DTGSs~lWv~~~~ 47 (329)
T 1oew_A 32 LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEETTCCCEEECBTT
T ss_pred EEECCCCCCeEEecCC
Confidence 9999999999998753
No 70
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=31.28 E-value=31 Score=30.55 Aligned_cols=15 Identities=13% Similarity=0.297 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 32 v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 32 LDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEETTCCCCEEEBT
T ss_pred EEEcCCCCCEEEccC
Confidence 899999999999864
No 71
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=30.54 E-value=26 Score=26.20 Aligned_cols=28 Identities=18% Similarity=0.393 Sum_probs=21.1
Q ss_pred EEEeEEEEC-----CEEeeCCCcccccCCCccEEEcccccccccCh
Q 019181 281 INMTAVQVG-----LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (345)
Q Consensus 281 v~l~~i~v~-----~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~ 321 (345)
-.+..|+|+ |+.+. +++|||.-.+.++.
T Consensus 10 RPlvtikI~~~~~~Gq~~e-------------aLLDTGADdTVl~~ 42 (116)
T 3liy_A 10 RPVIKAQVDTQTSHPKTIE-------------ALLDTGADMTVIPI 42 (116)
T ss_dssp CCEEEEEEECSSSCCEEEE-------------EEECTTBSSCEEEG
T ss_pred CCeEEEEEccccCCCeEeE-------------EEeccCCCccEEec
Confidence 345667777 66554 99999999998874
No 72
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=30.10 E-value=45 Score=24.87 Aligned_cols=27 Identities=7% Similarity=0.203 Sum_probs=21.2
Q ss_pred EEeEEEECCEEeeCCCcccccCCCccEEEcccccccccCh
Q 019181 282 NMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (345)
Q Consensus 282 ~l~~i~v~~~~~~~~~~~~~~~~~~~~i~DTGts~~~lp~ 321 (345)
.+..++++|+.+. +++|||.-.+.+..
T Consensus 10 P~vti~I~Gq~~e-------------aLLDTGADdTVi~~ 36 (114)
T 3sqf_A 10 PSLTLWLDDKMFT-------------GLINTGADVTIIKL 36 (114)
T ss_dssp CEEEEEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred CeEEEEECCEEEE-------------EEEccCCCceEEec
Confidence 3456888998775 99999999887753
No 73
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=28.56 E-value=23 Score=26.93 Aligned_cols=14 Identities=29% Similarity=0.710 Sum_probs=12.1
Q ss_pred EEEcccccccccCh
Q 019181 308 TIIDSGTTLAYLPE 321 (345)
Q Consensus 308 ~i~DTGts~~~lp~ 321 (345)
+++|||.-.+.++.
T Consensus 34 aLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 34 ALLDSGADITIISE 47 (124)
T ss_dssp EEECTTCSSCEEET
T ss_pred EEecCCCCcEEEec
Confidence 89999999988754
No 74
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=28.06 E-value=38 Score=30.46 Aligned_cols=15 Identities=20% Similarity=0.609 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
++||||++.+++|..
T Consensus 35 v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 35 LLFDTGSSDTWVPHK 49 (361)
T ss_dssp EEEETTCCCCEEEBT
T ss_pred EEEcCCCCCeEECCC
Confidence 899999999999875
No 75
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=27.82 E-value=42 Score=29.70 Aligned_cols=16 Identities=25% Similarity=0.584 Sum_probs=14.2
Q ss_pred EEEcccccccccChHH
Q 019181 308 TIIDSGTTLAYLPEMV 323 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~ 323 (345)
+++|||++.+++|..-
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (329)
T 1dpj_A 30 VILDTGSSNLWVPSNE 45 (329)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCcCeEEecCC
Confidence 8999999999998653
No 76
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=26.60 E-value=44 Score=30.62 Aligned_cols=15 Identities=7% Similarity=0.118 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
++||||++.+++|..
T Consensus 38 v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 38 VLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEETTCSSEEEECS
T ss_pred EEEECCCCceeECCC
Confidence 999999999999864
No 77
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=26.48 E-value=39 Score=31.22 Aligned_cols=14 Identities=14% Similarity=0.377 Sum_probs=13.3
Q ss_pred EEEcccccccccCh
Q 019181 308 TIIDSGTTLAYLPE 321 (345)
Q Consensus 308 ~i~DTGts~~~lp~ 321 (345)
+++|||++++|+|-
T Consensus 37 v~~DTGS~~lWv~c 50 (413)
T 3vla_A 37 LVVDLGGRFLWVDC 50 (413)
T ss_dssp EEEETTCSSEEEEC
T ss_pred EEEeCCChhhhccc
Confidence 99999999999985
No 78
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=26.00 E-value=46 Score=30.33 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
++||||++.+++|..
T Consensus 38 v~~DTGSs~lWv~~~ 52 (395)
T 2qp8_A 38 ILVDTGSSNFAVGAA 52 (395)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEecCCCceEEECC
Confidence 999999999999864
No 79
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=25.85 E-value=48 Score=29.24 Aligned_cols=16 Identities=19% Similarity=0.592 Sum_probs=14.3
Q ss_pred EEEcccccccccChHH
Q 019181 308 TIIDSGTTLAYLPEMV 323 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~ 323 (345)
+++|||++.+++|..-
T Consensus 31 v~~DTGSs~~Wv~~~~ 46 (323)
T 3cms_A 31 VLFDTGSSDFWVPSIY 46 (323)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCccceEEcCCC
Confidence 9999999999998753
No 80
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=25.23 E-value=57 Score=28.73 Aligned_cols=16 Identities=19% Similarity=0.412 Sum_probs=14.4
Q ss_pred EEEcccccccccChHH
Q 019181 308 TIIDSGTTLAYLPEMV 323 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~ 323 (345)
+++|||++.+++|..-
T Consensus 29 v~~DTGSs~~Wv~~~~ 44 (324)
T 1am5_A 29 VIFDTGSSNLWVSSSH 44 (324)
T ss_dssp EEEETTCCCEEECBTT
T ss_pred EEEeCCCcceEEecCC
Confidence 9999999999999753
No 81
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=24.88 E-value=50 Score=29.89 Aligned_cols=15 Identities=13% Similarity=0.319 Sum_probs=13.5
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (383)
T 2ewy_A 30 ILVDTGSSNFAVAGT 44 (383)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEecCCCceEEecC
Confidence 999999999999854
No 82
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=24.65 E-value=48 Score=29.10 Aligned_cols=15 Identities=20% Similarity=0.687 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 28 v~~DTGSs~~Wv~~~ 42 (320)
T 4aa9_A 28 VVFDTGSSDLWVPSI 42 (320)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEcCC
Confidence 899999999999874
No 83
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=23.87 E-value=49 Score=30.20 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
++||||++.+++|..
T Consensus 45 v~~DTGSs~lWv~~~ 59 (402)
T 3vf3_A 45 ILVDTGSSNFAVGAA 59 (402)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEeCCCCceEEccC
Confidence 999999999999864
No 84
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=23.74 E-value=54 Score=29.91 Aligned_cols=17 Identities=18% Similarity=0.532 Sum_probs=14.9
Q ss_pred EEEcccccccccChHHH
Q 019181 308 TIIDSGTTLAYLPEMVY 324 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~~ 324 (345)
+++|||++.+++|..-.
T Consensus 78 vi~DTGSs~lWV~s~~C 94 (383)
T 2x0b_A 78 VVFDTGSSNVWVPSSKC 94 (383)
T ss_dssp EEEETTCCCEEEEBTTS
T ss_pred EEEeCCCCCeEEeccCC
Confidence 99999999999997643
No 85
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=23.36 E-value=50 Score=30.98 Aligned_cols=15 Identities=27% Similarity=0.680 Sum_probs=14.0
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 155 vi~DTGSs~lWV~~~ 169 (453)
T 2bju_A 155 FILDTGSANLWVPSV 169 (453)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEECCCcceEEecc
Confidence 999999999999875
No 86
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=22.78 E-value=72 Score=26.56 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=23.4
Q ss_pred eeEEE---EEEeCCC----CceEEEEEEcCCCeeeEeCC
Q 019181 74 GLYYA---KIGIGTP----PKDYYVQVDTGSDIMWVNCI 105 (345)
Q Consensus 74 ~~Y~~---~i~vGtP----~q~~~v~~DTGS~~~wv~~~ 105 (345)
+.|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 44555 4678752 34578999999999999874
No 87
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=21.62 E-value=51 Score=29.49 Aligned_cols=15 Identities=27% Similarity=0.709 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 40 v~~DTGSs~lWv~~~ 54 (351)
T 1tzs_A 40 VIFDTGSSNLWVPSV 54 (351)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcceEEecC
Confidence 899999999999865
No 88
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=21.36 E-value=59 Score=30.46 Aligned_cols=15 Identities=7% Similarity=0.452 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
+++|||++.+++|..
T Consensus 154 vi~DTGSs~lWV~s~ 168 (451)
T 3qvc_A 154 FLFHTASSNVWVPSI 168 (451)
T ss_dssp EEEESSBCSEEEEBT
T ss_pred EEEcCCCccEEEecC
Confidence 899999999999975
No 89
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=21.11 E-value=64 Score=30.43 Aligned_cols=15 Identities=27% Similarity=0.658 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
++||||++.+++|..
T Consensus 69 v~~DTGSs~lWV~~~ 83 (478)
T 1qdm_A 69 VIFDTGSSNLWVPSA 83 (478)
T ss_dssp EEEETTCCCCEEEBT
T ss_pred EEEcCCCcceEEecC
Confidence 999999999999865
No 90
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=20.79 E-value=66 Score=29.99 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 019181 308 TIIDSGTTLAYLPEM 322 (345)
Q Consensus 308 ~i~DTGts~~~lp~~ 322 (345)
++||||++.+++|..
T Consensus 91 v~~DTGSs~lWV~~~ 105 (455)
T 3lpj_A 91 ILVDTGSSNFAVGAA 105 (455)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEcCCCcceEEecc
Confidence 999999999999864
No 91
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=20.21 E-value=66 Score=28.44 Aligned_cols=16 Identities=19% Similarity=0.576 Sum_probs=14.2
Q ss_pred EEEcccccccccChHH
Q 019181 308 TIIDSGTTLAYLPEMV 323 (345)
Q Consensus 308 ~i~DTGts~~~lp~~~ 323 (345)
+++|||++.+++|...
T Consensus 35 v~~DTGSs~~Wv~~~~ 50 (341)
T 3k1w_A 35 VVFDTGSSNVWVPSSK 50 (341)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCcceEEccCC
Confidence 8999999999998653
Done!