BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019185
MLLQMNLCSSFSLKYHPLQQNGTVKTFQSPLTQIYGLANRRESNKYSVKGSIQSSFCLTN
NKIGNNEDMMNRYHKPLKKSTVPMALQDDSATKSQNENIVSTSFLDFLTKKLDAFYRLSR
PYAWTSIIVGILSSSLLPIQSLADLTPTFLIEVLKPIVPTIMMNIFVVAINQLSDIAIDK
SLAMGVMLRSPPLVIALVLRCILGAAYSIDLPLLRWKASPLMAAVAIVIGNGINNVLPYF
LHVQKYVLGRPVVFTKPLLFAVAFSAIFSIVLSLLKDIPDVEGDKKSGIRTLPVILGKER
VLSMSTGILLMAYASAALAGVFSPILLCKLVTMIGHSVLGFILWK

High Scoring Gene Products

Symbol, full name Information P value
HPT1
homogentisate phytyltransferase 1
protein from Arabidopsis thaliana 2.7e-36
SfN8DT-2
Naringenin 8-dimethylallyltransferase
protein from Sophora flavescens 4.6e-34
N8DT-1
Naringenin 8-dimethylallyltransferase 1, chloroplastic
protein from Sophora flavescens 1.1e-32
HST
homogentisate prenyltransferase
protein from Arabidopsis thaliana 6.2e-16

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019185
        (345 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044440 - symbol:HPT1 "homogentisate phytyltra...   391  2.7e-36   1
UNIPROTKB|B1B5P4 - symbol:SfN8DT-2 "Naringenin 8-dimethyl...   370  4.6e-34   1
UNIPROTKB|B1B3P3 - symbol:N8DT-1 "Naringenin 8-dimethylal...   357  1.1e-32   1
TAIR|locus:4010713740 - symbol:HST "homogentisate prenylt...   192  6.2e-16   2


>TAIR|locus:2044440 [details] [associations]
            symbol:HPT1 "homogentisate phytyltransferase 1"
            species:3702 "Arabidopsis thaliana" [GO:0004659 "prenyltransferase
            activity" evidence=IEA;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0010189 "vitamin E biosynthetic process"
            evidence=IMP;TAS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISS] [GO:0010176 "homogentisate
            phytyltransferase activity" evidence=IMP;IDA] [GO:0042362
            "fat-soluble vitamin biosynthetic process" evidence=TAS]
            [GO:0009266 "response to temperature stimulus" evidence=IMP]
            [GO:0009915 "phloem sucrose loading" evidence=IMP] [GO:0031347
            "regulation of defense response" evidence=IMP] [GO:0006636
            "unsaturated fatty acid biosynthetic process" evidence=RCA;IMP]
            [GO:0071555 "cell wall organization" evidence=IMP] [GO:0000096
            "sulfur amino acid metabolic process" evidence=RCA] [GO:0006546
            "glycine catabolic process" evidence=RCA] [GO:0006733
            "oxidoreduction coenzyme metabolic process" evidence=RCA]
            [GO:0006766 "vitamin metabolic process" evidence=RCA] [GO:0008652
            "cellular amino acid biosynthetic process" evidence=RCA]
            [GO:0009072 "aromatic amino acid family metabolic process"
            evidence=RCA] [GO:0009106 "lipoate metabolic process" evidence=RCA]
            [GO:0009108 "coenzyme biosynthetic process" evidence=RCA]
            [GO:0009117 "nucleotide metabolic process" evidence=RCA]
            [GO:0009416 "response to light stimulus" evidence=RCA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
            "leaf morphogenesis" evidence=RCA] [GO:0015994 "chlorophyll
            metabolic process" evidence=RCA] [GO:0019216 "regulation of lipid
            metabolic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019748 "secondary metabolic process"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            [GO:0031408 "oxylipin biosynthetic process" evidence=RCA]
            [GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR000537 Pfam:PF01040 UniPathway:UPA00160
            GO:GO:0016021 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006636 EMBL:AC003673 GO:GO:0071555 GO:GO:0009535
            GO:GO:0009266 GO:GO:0009915 GO:GO:0031347 eggNOG:COG0382
            GO:GO:0010189 EMBL:AF324344 EMBL:AY089963 EMBL:GU198365
            EMBL:AY063893 EMBL:AY113993 IPI:IPI00546170 PIR:T01623
            RefSeq:NP_849984.1 UniGene:At.27152 STRING:Q8VWJ1 PRIDE:Q8VWJ1
            GeneID:816412 KEGG:ath:AT2G18950 TAIR:At2g18950
            HOGENOM:HOG000264578 InParanoid:Q8VWJ1 KO:K09833 OMA:YQFIWKL
            PhylomeDB:Q8VWJ1 ProtClustDB:PLN02878 Genevestigator:Q8VWJ1
            GO:GO:0010176 Uniprot:Q8VWJ1
        Length = 393

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 84/194 (43%), Positives = 123/194 (63%)

Query:   152 EVLKPIVPTIMMNIFV-VAINQLSDIAIDKSLAMGVMLRSPPLVIALVLRCILGAAYSID 210
             +V KP +P       V   I  ++  +I  S  +G ++ S PL  AL +  +LG AYSI+
Sbjct:   165 KVNKPYLPLASGEYSVNTGIAIVASFSI-MSFWLGWIVGSWPLFWALFVSFMLGTAYSIN 223

Query:   211 LPLLRWKASPLMAAVAIVIGNGINNVLPYFLHVQKYVLGRPVVFTKPLLFAVAFSAIFSI 270
             LPLLRWK   L+AA+ I+    I   + ++LH+Q +V GRP++FT+PL+FA AF + FS+
Sbjct:   224 LPLLRWKRFALVAAMCILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSV 283

Query:   271 VLSLLKDIPDVEGDKKSGIRTLPVILGKERVLSMSTGILLMAYASAALAGVFSPILLCKL 330
             V++L KDIPD+EGDK  GIR+  V LG++RV      +L MAYA A L G  SP +  K+
Sbjct:   284 VIALFKDIPDIEGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKV 343

Query:   331 VTMIGHSVLGFILW 344
             ++++GH +L   LW
Sbjct:   344 ISVVGHVILATTLW 357

 Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 50/181 (27%), Positives = 82/181 (45%)

Query:    90 SATKSQNENIVSTSFLDFLTKKLDAFYRLSRPYAWTXXXXXXXXXXXXXXXXXADLTPTF 149
             +AT  Q E   S S        LDAFYR SRP+                    +D++P  
Sbjct:    75 NATAGQPEAFDSNSKQKSFRDSLDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISPLL 134

Query:   150 LIEVLKPIVPTIMMNIFVVAINQLSDIAIDKSLAMGVMLRSPPLVIALVLRCILGAAYSI 209
                +L+ +V  +MMNI++V +NQLSD+ IDK     + L S    +   +  +  A++SI
Sbjct:   135 FTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIV--ASFSI 192

Query:   210 DLPLLRWKAS--PLMAA--VAIVIGNGINNVLPYFLHVQKYVL--GRPVVFTKPLLFAVA 263
                 L W     PL  A  V+ ++G   +  LP  L  +++ L     ++  + ++  +A
Sbjct:   193 MSFWLGWIVGSWPLFWALFVSFMLGTAYSINLP-LLRWKRFALVAAMCILAVRAIIVQIA 251

Query:   264 F 264
             F
Sbjct:   252 F 252


>UNIPROTKB|B1B5P4 [details] [associations]
            symbol:SfN8DT-2 "Naringenin 8-dimethylallyltransferase"
            species:49840 "Sophora flavescens" [GO:0004659 "prenyltransferase
            activity" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR000537 Pfam:PF01040 GO:GO:0016021 GO:GO:0009507
            GO:GO:0004659 EMBL:AB370330 BioCyc:MetaCyc:MONOMER-16838
            Uniprot:B1B5P4
        Length = 407

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 72/193 (37%), Positives = 118/193 (61%)

Query:   152 EVLKPIVPTIMMNIFVVAINQLSDIAIDKSLAMGVMLRSPPLVIALVLRCILGAAYSIDL 211
             ++ KP +P    N+    +  ++  ++   L    ++ S PL   + + C+  AAY++DL
Sbjct:   179 KINKPDLPLASGNLSFRNVVIITASSLILGLGFAWIVGSWPLFWTVFICCMFAAAYNVDL 238

Query:   212 PLLRWKASPLMAAVAIVIGNGINNVLPYFLHVQKYVLGRPVVFTKPLLFAVAFSAIFSIV 271
             PLLRWK  P++ A++ +    +   L +FLH+Q  V  RP  F +PL+F  A  +I++IV
Sbjct:   239 PLLRWKKYPVLTAISFIANVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTAIVSIYAIV 298

Query:   272 LSLLKDIPDVEGDKKSGIRTLPVILGKERVLSMSTGILLMAYASAALAGVFSPILLCKLV 331
             ++L KDIPD+EGD+K GI++L + LG +RV  +   +L MAY    L G  SPIL  K++
Sbjct:   299 IALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMAYGVTILVGATSPILWSKII 358

Query:   332 TMIGHSVLGFILW 344
             T++GH++L  +LW
Sbjct:   359 TVLGHAILASVLW 371


>UNIPROTKB|B1B3P3 [details] [associations]
            symbol:N8DT-1 "Naringenin 8-dimethylallyltransferase 1,
            chloroplastic" species:49840 "Sophora flavescens" [GO:0004659
            "prenyltransferase activity" evidence=IDA] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 GO:GO:0009507 GO:GO:0031969 GO:GO:0004659
            EMBL:AB325579 BioCyc:MetaCyc:MONOMER-16837 Uniprot:B1B3P3
        Length = 410

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 67/163 (41%), Positives = 104/163 (63%)

Query:   182 LAMGVMLRSPPLVIALVLRCILGAAYSIDLPLLRWKASPLMAAVAIVIGNGINNVLPYFL 241
             L    ++ S PL   + + C++ +AY++DLPLLRWK  P++ A+  +    +   L +FL
Sbjct:   212 LGFAWIVDSWPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFL 271

Query:   242 HVQKYVLGRPVVFTKPLLFAVAFSAIFSIVLSLLKDIPDVEGDKKSGIRTLPVILGKERV 301
             H+Q  V  RP  F +PL+F  A  +I++IV++L KDIPD+EGD+K GI++L + LG +RV
Sbjct:   272 HMQTCVFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRV 331

Query:   302 LSMSTGILLMAYASAALAGVFSPILLCKLVTMIGHSVLGFILW 344
               +   +L M Y    L G  SPIL  K++T++GH+VL  +LW
Sbjct:   332 FWICVSLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLW 374

 Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 58/207 (28%), Positives = 89/207 (42%)

Query:    75 KPLKKSTVPMALQDDSATKSQNENIVSTSFLDFLTKKLDAFYRLSRPYAWTXXXXXXXXX 134
             K  +K  V  A+ + S  + + +     S  D +   LD FY+  RPYA           
Sbjct:    78 KECEKKYVVNAISEQSF-EYEPQTRDPESIWDSVNDALDIFYKFCRPYAMFTIVLGATFK 136

Query:   135 XXXXXXXXADLTPTFLIEVLKPIVPTIMMNIFVVAINQLSDIAIDK------SLAMGVM- 187
                     +DL+  F I  L+ +V  I ++IF V +NQL DI IDK       LA G + 
Sbjct:   137 SLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLS 196

Query:   188 LRSPPLVIALVLRCILGAAYSIDLPLLRWKASPLMAAVAIVIGNGINNVLPYFLHVQKYV 247
              R+  ++ A  L   LG A+ +D   L W        ++ ++ +  N  LP  L  +KY 
Sbjct:   197 FRNVVIITASSLILGLGFAWIVDSWPLFWTVF-----ISCMVASAYNVDLP-LLRWKKY- 249

Query:   248 LGRPVVFTKPLLFAVAFSAIFSIVLSL 274
                      P+L A+ F A  ++  SL
Sbjct:   250 ---------PVLTAINFIADVAVTRSL 267


>TAIR|locus:4010713740 [details] [associations]
            symbol:HST "homogentisate prenyltransferase"
            species:3702 "Arabidopsis thaliana" [GO:0004161
            "dimethylallyltranstransferase activity" evidence=NAS] [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0010236 "plastoquinone biosynthetic process"
            evidence=IMP] [GO:0010355 "homogentisate farnesyltransferase
            activity" evidence=IDA] [GO:0010356 "homogentisate
            geranylgeranyltransferase activity" evidence=IDA] [GO:0010357
            "homogentisate solanesyltransferase activity" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] [GO:0016117 "carotenoid biosynthetic
            process" evidence=IMP] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 EMBL:CP002686 GO:GO:0009941 GO:GO:0016117
            GO:GO:0010236 IPI:IPI00938788 RefSeq:NP_001154609.1
            UniGene:At.71046 PRIDE:F4J8K0 EnsemblPlants:AT3G11945.2
            GeneID:5007993 KEGG:ath:AT3G11945 KO:K12501 OMA:TIYSVPP
            GO:GO:0010355 GO:GO:0010356 GO:GO:0010357 Uniprot:F4J8K0
        Length = 393

 Score = 192 (72.6 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
 Identities = 49/150 (32%), Positives = 78/150 (52%)

Query:   192 PLVIALV-LRCILGAAYSIDLPLLRWKASPLMAAVAIVIGNG-INNVLPYFLHVQKYVLG 249
             P + +L  L   LG  YS+  P LR K  P+ A + I    G + N   Y  H  +  LG
Sbjct:   206 PFITSLYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY--HATRAALG 261

Query:   250 RPVVFTKPLLFAVAFSAIFSIVLSLLKDIPDVEGDKKSGIRTLPVILGKERVLSMSTGIL 309
              P  ++ P+ F  +F  +F++V+++ KD+PDVEGD+K  I TL   LG   +  + +G+L
Sbjct:   262 LPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLL 321

Query:   310 LMAYASAALAGVFSPILLCKLVTMIGHSVL 339
             L+ Y SA     + P +    + +  H +L
Sbjct:   322 LVNYVSAISLAFYMPQVFRGSLMIPAHVIL 351

 Score = 66 (28.3 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
 Identities = 19/77 (24%), Positives = 33/77 (42%)

Query:   105 LDFLTKKLDAFYRLSRPYAWTXXXXXXXXXXXXXXXXXADLTP-TFLIEVLKPIVPTIMM 163
             LD + +  +A +R  RP+                      L   + +++ L  ++  I  
Sbjct:    91 LDRIARFQNACWRFLRPHTIRGTALGSTALVTRALIENTHLIKWSLVLKALSGLLALICG 150

Query:   164 NIFVVAINQLSDIAIDK 180
             N ++V INQ+ DI IDK
Sbjct:   151 NGYIVGINQIYDIGIDK 167


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      345       328   0.00088  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  192 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.19u 0.11s 26.30t   Elapsed:  00:00:02
  Total cpu time:  26.19u 0.11s 26.30t   Elapsed:  00:00:02
  Start:  Sat May 11 01:32:19 2013   End:  Sat May 11 01:32:21 2013

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