Query 019186
Match_columns 345
No_of_seqs 163 out of 2160
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 12:13:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019186.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019186hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 1.1E-45 3.7E-50 327.2 29.9 273 47-343 16-308 (308)
2 3ii7_A Kelch-like protein 7; p 100.0 4.3E-45 1.5E-49 323.0 31.0 262 55-344 11-294 (306)
3 2xn4_A Kelch-like protein 2; s 100.0 7.2E-45 2.5E-49 321.0 31.0 263 54-344 14-299 (302)
4 2vpj_A Kelch-like protein 12; 100.0 5.2E-44 1.8E-48 315.3 29.6 263 54-344 13-300 (301)
5 4asc_A Kelch repeat and BTB do 100.0 1.4E-42 4.8E-47 308.2 27.2 271 55-343 4-296 (315)
6 2woz_A Kelch repeat and BTB do 100.0 8.6E-42 2.9E-46 303.5 26.2 271 55-343 15-306 (318)
7 2uvk_A YJHT; unknown function, 100.0 6.2E-41 2.1E-45 302.7 21.4 261 54-333 18-354 (357)
8 1zgk_A Kelch-like ECH-associat 100.0 4.3E-37 1.5E-41 272.0 24.9 227 92-343 15-261 (308)
9 2uvk_A YJHT; unknown function, 100.0 1.1E-36 3.8E-41 274.9 27.3 241 81-343 2-315 (357)
10 2xn4_A Kelch-like protein 2; s 100.0 5.3E-38 1.8E-42 277.0 16.7 248 23-290 30-302 (302)
11 4asc_A Kelch repeat and BTB do 100.0 8E-38 2.7E-42 277.6 15.8 256 24-296 14-306 (315)
12 3ii7_A Kelch-like protein 7; p 100.0 1.9E-37 6.5E-42 274.0 17.5 248 22-288 23-295 (306)
13 2woz_A Kelch repeat and BTB do 100.0 1.3E-37 4.4E-42 276.6 16.3 254 25-295 26-315 (318)
14 2vpj_A Kelch-like protein 12; 100.0 3.9E-35 1.3E-39 258.5 25.9 221 99-343 12-252 (301)
15 1k3i_A Galactose oxidase precu 100.0 1.2E-35 4E-40 288.6 12.5 292 25-343 168-518 (656)
16 2zwa_A Leucine carboxyl methyl 100.0 9.2E-33 3.1E-37 268.9 22.8 243 54-319 396-694 (695)
17 2zwa_A Leucine carboxyl methyl 100.0 1.4E-30 4.8E-35 253.5 24.8 215 92-327 389-641 (695)
18 1k3i_A Galactose oxidase precu 100.0 2.6E-29 8.7E-34 244.1 19.9 253 68-343 167-464 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.4E-07 4.7E-12 86.7 23.7 271 3-320 17-349 (445)
20 1p22_A F-BOX/WD-repeat protein 99.0 3.3E-08 1.1E-12 90.7 18.9 271 4-319 10-365 (435)
21 3v7d_B Cell division control p 98.9 1.8E-07 6.2E-12 86.2 20.0 273 4-320 14-382 (464)
22 3dsm_A Uncharacterized protein 98.5 3.3E-05 1.1E-09 67.9 23.3 214 66-320 16-254 (328)
23 3mbr_X Glutamine cyclotransfer 98.5 2.5E-05 8.5E-10 65.0 19.5 180 92-295 21-223 (243)
24 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00037 1.3E-08 62.1 26.6 224 54-327 52-304 (376)
25 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.0002 6.7E-09 63.9 24.2 221 55-327 103-345 (376)
26 1fs1_A SKP2 F-BOX, cyclin A/CD 98.3 5.2E-07 1.8E-11 56.4 3.9 42 3-44 7-48 (53)
27 3nol_A Glutamine cyclotransfer 98.3 4.9E-05 1.7E-09 63.8 16.8 179 93-295 44-244 (262)
28 3nok_A Glutaminyl cyclase; bet 98.1 0.00029 1E-08 59.2 18.3 176 93-295 56-254 (268)
29 3dsm_A Uncharacterized protein 98.1 0.00084 2.9E-08 58.8 22.1 183 127-325 16-216 (328)
30 3mbr_X Glutamine cyclotransfer 98.1 0.0003 1E-08 58.5 17.3 148 55-230 30-181 (243)
31 2iwa_A Glutamine cyclotransfer 98.0 0.00048 1.7E-08 58.3 17.7 178 95-296 24-226 (266)
32 1l0q_A Surface layer protein; 98.0 0.00047 1.6E-08 61.5 18.0 221 56-320 2-234 (391)
33 3nol_A Glutamine cyclotransfer 97.9 0.00056 1.9E-08 57.4 15.8 149 55-231 52-204 (262)
34 2e31_A FBS1, F-box only protei 97.9 5.7E-06 1.9E-10 70.7 3.6 49 3-51 49-98 (297)
35 3nok_A Glutaminyl cyclase; bet 97.9 0.00049 1.7E-08 57.8 14.5 146 55-230 64-212 (268)
36 1l0q_A Surface layer protein; 97.8 0.00047 1.6E-08 61.5 15.0 219 55-320 43-276 (391)
37 1rwi_B Serine/threonine-protei 97.8 0.0085 2.9E-07 50.1 21.9 222 55-320 34-265 (270)
38 3vgz_A Uncharacterized protein 97.7 0.011 3.7E-07 51.5 21.7 224 55-320 52-304 (353)
39 2iwa_A Glutamine cyclotransfer 97.6 0.0046 1.6E-07 52.3 17.4 147 56-230 32-183 (266)
40 1k8k_C P40, ARP2/3 complex 41 97.6 0.0039 1.3E-07 54.7 18.1 237 55-331 19-286 (372)
41 4ery_A WD repeat-containing pr 97.6 0.018 6.3E-07 49.3 21.7 220 57-320 36-269 (312)
42 1q7f_A NHL, brain tumor CG1071 97.6 0.025 8.7E-07 47.7 23.5 213 55-294 40-268 (286)
43 2ovr_B FBW7, F-BOX/WD repeat p 97.5 0.012 4E-07 53.5 20.0 173 129-320 260-443 (445)
44 1ri6_A Putative isomerase YBHE 97.5 0.0055 1.9E-07 53.0 17.2 240 55-336 49-325 (343)
45 1gxr_A ESG1, transducin-like e 97.5 0.0095 3.3E-07 51.3 18.1 225 55-320 62-297 (337)
46 4aez_A CDC20, WD repeat-contai 97.5 0.0074 2.5E-07 54.1 17.4 229 56-330 104-345 (401)
47 2qc5_A Streptogramin B lactona 97.4 0.041 1.4E-06 46.5 21.9 205 55-294 72-289 (300)
48 3i2n_A WD repeat-containing pr 97.4 0.013 4.5E-07 50.9 18.5 184 55-265 30-243 (357)
49 2z2n_A Virginiamycin B lyase; 97.4 0.047 1.6E-06 46.0 23.0 219 55-320 67-296 (299)
50 3bws_A Protein LP49; two-domai 97.4 0.029 9.9E-07 50.4 20.6 236 55-320 133-391 (433)
51 4ery_A WD repeat-containing pr 97.3 0.025 8.6E-07 48.4 18.4 208 58-296 79-299 (312)
52 2qc5_A Streptogramin B lactona 97.3 0.064 2.2E-06 45.2 22.8 218 55-318 30-259 (300)
53 3jrp_A Fusion protein of prote 97.3 0.0032 1.1E-07 55.4 12.7 237 56-331 23-298 (379)
54 3ow8_A WD repeat-containing pr 97.3 0.015 5.1E-07 50.5 16.7 202 66-297 101-311 (321)
55 1gxr_A ESG1, transducin-like e 97.3 0.017 5.9E-07 49.6 17.1 202 66-297 118-327 (337)
56 1rwi_B Serine/threonine-protei 97.2 0.055 1.9E-06 45.1 19.5 179 55-265 77-264 (270)
57 3dwl_C Actin-related protein 2 97.2 0.0029 9.9E-08 55.9 11.9 150 55-229 22-178 (377)
58 3no2_A Uncharacterized protein 97.2 0.076 2.6E-06 45.0 22.2 209 55-294 4-230 (276)
59 3ow8_A WD repeat-containing pr 97.2 0.012 4E-07 51.1 15.3 170 128-320 102-280 (321)
60 1p22_A F-BOX/WD-repeat protein 97.2 0.011 3.8E-07 53.5 15.6 183 97-320 138-326 (435)
61 3bws_A Protein LP49; two-domai 97.2 0.017 5.7E-07 52.0 16.8 224 55-318 180-431 (433)
62 3vgz_A Uncharacterized protein 97.2 0.094 3.2E-06 45.4 23.8 215 55-295 100-333 (353)
63 2ynn_A Coatomer subunit beta'; 97.2 0.051 1.7E-06 46.5 18.7 222 56-320 25-260 (304)
64 3v7d_B Cell division control p 97.2 0.049 1.7E-06 49.5 19.6 133 128-270 290-426 (464)
65 3u4y_A Uncharacterized protein 97.1 0.014 4.8E-07 50.4 15.2 225 54-325 8-256 (331)
66 4aez_A CDC20, WD repeat-contai 97.1 0.04 1.4E-06 49.2 18.3 211 67-320 156-381 (401)
67 3vl1_A 26S proteasome regulato 97.1 0.12 4.2E-06 45.9 21.4 222 56-319 109-365 (420)
68 1npe_A Nidogen, entactin; glyc 97.1 0.1 3.4E-06 43.7 20.9 190 55-273 47-246 (267)
69 2hqs_A Protein TOLB; TOLB, PAL 97.1 0.12 4.1E-06 46.5 21.1 222 67-330 159-396 (415)
70 1q7f_A NHL, brain tumor CG1071 97.1 0.044 1.5E-06 46.3 17.1 180 55-262 88-277 (286)
71 3odt_A Protein DOA1; ubiquitin 97.0 0.057 1.9E-06 45.8 17.5 150 159-332 154-307 (313)
72 3fvz_A Peptidyl-glycine alpha- 97.0 0.15 5E-06 44.2 24.6 214 68-319 70-322 (329)
73 3v9f_A Two-component system se 97.0 0.12 4.2E-06 50.6 21.8 184 55-269 417-617 (781)
74 1r5m_A SIR4-interacting protei 97.0 0.018 6.2E-07 51.2 14.6 127 128-265 227-361 (425)
75 3mkq_A Coatomer beta'-subunit; 97.0 0.028 9.6E-07 55.1 17.1 222 57-320 26-260 (814)
76 2z2n_A Virginiamycin B lyase; 96.9 0.14 4.8E-06 43.0 24.2 206 55-294 25-242 (299)
77 3v9f_A Two-component system se 96.9 0.099 3.4E-06 51.3 20.6 225 55-327 373-617 (781)
78 3k26_A Polycomb protein EED; W 96.9 0.072 2.4E-06 46.2 17.8 149 55-230 34-194 (366)
79 1got_B GT-beta; complex (GTP-b 96.9 0.024 8.2E-07 49.5 14.5 160 128-298 164-334 (340)
80 4gga_A P55CDC, cell division c 96.9 0.11 3.8E-06 46.6 19.2 136 66-229 124-262 (420)
81 3jrp_A Fusion protein of prote 96.9 0.048 1.6E-06 47.6 16.5 95 128-229 33-135 (379)
82 4g56_B MGC81050 protein; prote 96.9 0.12 3.9E-06 45.5 18.8 225 55-320 105-344 (357)
83 3hfq_A Uncharacterized protein 96.9 0.029 9.8E-07 48.9 14.7 195 55-273 50-282 (347)
84 1pjx_A Dfpase, DIISOPROPYLFLUO 96.9 0.11 3.8E-06 44.2 18.2 228 55-320 28-300 (314)
85 1vyh_C Platelet-activating fac 96.9 0.064 2.2E-06 48.2 17.3 136 66-232 129-269 (410)
86 2aq5_A Coronin-1A; WD40 repeat 96.8 0.1 3.5E-06 46.5 18.3 182 59-265 49-254 (402)
87 1r5m_A SIR4-interacting protei 96.8 0.051 1.8E-06 48.2 16.1 223 56-320 120-362 (425)
88 4a11_B DNA excision repair pro 96.8 0.078 2.7E-06 46.8 17.1 214 66-320 121-366 (408)
89 4a2l_A BT_4663, two-component 96.7 0.29 1E-05 48.0 22.4 226 55-327 367-620 (795)
90 1sq9_A Antiviral protein SKI8; 96.7 0.037 1.3E-06 48.9 14.6 191 57-272 82-329 (397)
91 2ojh_A Uncharacterized protein 96.7 0.18 6.3E-06 41.9 18.3 230 65-328 20-265 (297)
92 3jro_A Fusion protein of prote 96.7 0.0088 3E-07 58.6 11.0 237 56-331 21-296 (753)
93 3no2_A Uncharacterized protein 96.7 0.071 2.4E-06 45.1 15.4 183 100-327 3-203 (276)
94 1jmx_B Amine dehydrogenase; ox 96.7 0.031 1.1E-06 48.4 13.4 153 55-231 10-178 (349)
95 2ad6_A Methanol dehydrogenase 96.7 0.45 1.6E-05 44.8 22.4 115 97-234 58-193 (571)
96 1got_B GT-beta; complex (GTP-b 96.7 0.14 4.6E-06 44.6 17.4 213 66-320 76-302 (340)
97 2dg1_A DRP35, lactonase; beta 96.6 0.17 6E-06 43.5 17.8 190 55-265 55-263 (333)
98 2pm9_A Protein WEB1, protein t 96.6 0.078 2.7E-06 47.1 15.7 225 58-320 81-338 (416)
99 3vl1_A 26S proteasome regulato 96.6 0.033 1.1E-06 49.8 13.0 137 66-231 77-215 (420)
100 1sq9_A Antiviral protein SKI8; 96.5 0.23 7.9E-06 43.7 18.4 100 208-320 197-323 (397)
101 3odt_A Protein DOA1; ubiquitin 96.5 0.13 4.3E-06 43.5 16.1 211 66-320 38-256 (313)
102 1k8k_C P40, ARP2/3 complex 41 96.5 0.02 6.7E-07 50.2 11.2 140 101-263 19-171 (372)
103 2pm7_B Protein transport prote 96.5 0.27 9.1E-06 41.7 18.0 235 56-330 21-295 (297)
104 4aow_A Guanine nucleotide-bind 96.5 0.12 4E-06 44.4 15.9 140 160-320 185-338 (340)
105 3bg1_A Protein SEC13 homolog; 96.5 0.055 1.9E-06 46.6 13.7 240 56-336 25-309 (316)
106 3g4e_A Regucalcin; six bladed 96.5 0.13 4.5E-06 43.8 15.9 211 55-297 24-263 (297)
107 1nir_A Nitrite reductase; hemo 96.4 0.16 5.5E-06 47.6 17.4 288 1-331 88-417 (543)
108 2pbi_B Guanine nucleotide-bind 96.4 0.36 1.2E-05 42.2 18.7 214 66-320 85-316 (354)
109 4gqb_B Methylosome protein 50; 96.4 0.21 7.2E-06 43.7 17.1 217 66-320 102-332 (344)
110 4g56_B MGC81050 protein; prote 96.4 0.11 3.9E-06 45.6 15.4 171 128-320 115-302 (357)
111 3hfq_A Uncharacterized protein 96.4 0.021 7.3E-07 49.7 10.6 172 68-262 19-215 (347)
112 4a2l_A BT_4663, two-component 96.4 0.24 8.1E-06 48.7 18.9 180 58-269 420-620 (795)
113 3v65_B Low-density lipoprotein 96.4 0.51 1.7E-05 42.0 22.0 195 67-294 96-305 (386)
114 4e54_B DNA damage-binding prot 96.3 0.072 2.4E-06 48.2 13.9 183 56-267 132-329 (435)
115 3jro_A Fusion protein of prote 96.3 0.035 1.2E-06 54.4 12.5 95 128-229 31-133 (753)
116 3l2o_B F-box only protein 4; s 96.3 0.0012 4E-08 56.0 1.6 47 4-50 4-50 (312)
117 1nir_A Nitrite reductase; hemo 96.3 0.1 3.6E-06 48.9 15.2 231 55-320 190-459 (543)
118 1npe_A Nidogen, entactin; glyc 96.3 0.39 1.3E-05 40.0 25.0 215 67-320 10-239 (267)
119 1n7d_A LDL receptor, low-densi 96.2 0.22 7.5E-06 48.3 17.5 195 67-294 386-601 (699)
120 3dwl_C Actin-related protein 2 96.2 0.032 1.1E-06 49.0 10.8 96 128-230 33-133 (377)
121 3ei3_B DNA damage-binding prot 96.2 0.092 3.1E-06 46.3 13.7 181 57-266 87-283 (383)
122 3zwl_B Eukaryotic translation 96.2 0.11 3.7E-06 45.1 14.0 217 66-320 95-347 (369)
123 3f3f_A Nucleoporin SEH1; struc 96.2 0.5 1.7E-05 40.2 18.1 32 287-331 317-348 (351)
124 3scy_A Hypothetical bacterial 96.1 0.59 2E-05 40.6 19.8 108 208-328 221-346 (361)
125 2pm9_A Protein WEB1, protein t 96.1 0.24 8.2E-06 43.8 16.3 186 56-265 126-337 (416)
126 1yfq_A Cell cycle arrest prote 96.1 0.39 1.3E-05 41.1 17.1 134 66-228 32-179 (342)
127 4gqb_B Methylosome protein 50; 96.1 0.14 4.9E-06 44.8 14.1 171 128-320 103-290 (344)
128 3k26_A Polycomb protein EED; W 96.1 0.6 2.1E-05 40.2 18.3 105 56-187 85-194 (366)
129 3e5z_A Putative gluconolactona 96.0 0.51 1.7E-05 39.8 17.2 183 55-265 39-246 (296)
130 1ri6_A Putative isomerase YBHE 96.0 0.096 3.3E-06 45.0 12.7 183 55-264 4-208 (343)
131 1kb0_A Quinohemoprotein alcoho 96.0 0.34 1.2E-05 46.7 17.5 108 154-269 72-207 (677)
132 3m0c_C LDL receptor, low-densi 96.0 1.3 4.5E-05 43.4 23.1 194 67-294 404-619 (791)
133 3v64_C Agrin; beta propeller, 96.0 0.73 2.5E-05 40.3 23.5 194 66-294 52-262 (349)
134 2hes_X YDR267CP; beta-propelle 96.0 0.26 8.8E-06 42.6 15.2 153 58-234 26-190 (330)
135 1kv9_A Type II quinohemoprotei 95.9 1.3 4.3E-05 42.6 22.7 114 97-234 62-195 (668)
136 1vyh_C Platelet-activating fac 95.9 0.2 6.7E-06 44.9 14.6 59 209-267 308-371 (410)
137 3sfz_A APAF-1, apoptotic pepti 95.9 0.06 2.1E-06 55.7 12.5 201 66-297 1024-1239(1249)
138 1yiq_A Quinohemoprotein alcoho 95.9 1.3 4.5E-05 42.7 23.1 114 97-234 66-200 (689)
139 1pby_B Quinohemoprotein amine 95.9 0.61 2.1E-05 39.7 17.1 105 66-189 10-128 (337)
140 4ggc_A P55CDC, cell division c 95.9 0.5 1.7E-05 39.9 16.4 147 55-230 36-183 (318)
141 3u4y_A Uncharacterized protein 95.9 0.73 2.5E-05 39.3 18.1 234 55-331 51-314 (331)
142 4aow_A Guanine nucleotide-bind 95.8 0.38 1.3E-05 41.1 15.7 171 128-320 108-287 (340)
143 1qhu_A Protein (hemopexin); be 95.8 0.35 1.2E-05 44.0 15.6 159 101-295 158-375 (460)
144 2hz6_A Endoplasmic reticulum t 95.8 0.0087 3E-07 53.3 5.0 166 128-327 19-200 (369)
145 1yfq_A Cell cycle arrest prote 95.8 0.57 2E-05 40.0 16.7 210 58-299 71-315 (342)
146 2ojh_A Uncharacterized protein 95.8 0.56 1.9E-05 38.8 16.2 155 56-236 53-214 (297)
147 2pbi_B Guanine nucleotide-bind 95.8 0.35 1.2E-05 42.2 15.3 159 128-297 176-347 (354)
148 3zwl_B Eukaryotic translation 95.8 0.51 1.7E-05 40.7 16.4 216 57-297 45-280 (369)
149 3mmy_A MRNA export factor; mRN 95.8 0.61 2.1E-05 40.1 16.8 202 66-298 107-337 (368)
150 3fm0_A Protein CIAO1; WDR39,SG 95.7 0.099 3.4E-06 45.6 11.6 153 57-234 29-187 (345)
151 4gga_A P55CDC, cell division c 95.7 0.44 1.5E-05 42.6 16.1 100 208-319 288-395 (420)
152 1erj_A Transcriptional repress 95.7 0.2 7E-06 44.4 13.7 145 56-229 135-288 (393)
153 1pjx_A Dfpase, DIISOPROPYLFLUO 95.7 0.82 2.8E-05 38.6 17.9 196 56-265 83-299 (314)
154 3p5b_L Low density lipoprotein 95.7 1.1 3.8E-05 40.0 24.0 196 66-294 91-307 (400)
155 3g4e_A Regucalcin; six bladed 95.7 0.85 2.9E-05 38.6 19.1 189 101-332 24-240 (297)
156 3ei3_B DNA damage-binding prot 95.7 0.81 2.8E-05 40.0 17.4 132 128-265 96-236 (383)
157 3hxj_A Pyrrolo-quinoline quino 95.6 0.72 2.5E-05 39.3 16.4 191 55-293 107-311 (330)
158 2hqs_A Protein TOLB; TOLB, PAL 95.5 1.2 4.2E-05 39.8 18.2 143 67-236 203-352 (415)
159 4e54_B DNA damage-binding prot 95.5 0.58 2E-05 42.0 16.2 148 96-265 124-282 (435)
160 2vdu_B TRNA (guanine-N(7)-)-me 95.5 1.3 4.5E-05 39.8 18.6 103 159-267 160-273 (450)
161 1qhu_A Protein (hemopexin); be 95.5 1.4 4.9E-05 40.0 23.7 199 55-295 158-428 (460)
162 3ott_A Two-component system se 95.4 1.7 5.7E-05 42.4 20.0 180 55-265 383-586 (758)
163 1ijq_A LDL receptor, low-densi 95.4 1.1 3.9E-05 38.4 24.2 195 67-294 10-225 (316)
164 3sfz_A APAF-1, apoptotic pepti 95.4 0.54 1.9E-05 48.5 17.2 171 128-320 983-1159(1249)
165 2ad6_A Methanol dehydrogenase 95.3 0.28 9.5E-06 46.3 13.6 117 204-327 58-193 (571)
166 3scy_A Hypothetical bacterial 95.3 0.77 2.6E-05 39.9 15.7 140 69-230 31-188 (361)
167 1kv9_A Type II quinohemoprotei 95.2 0.19 6.4E-06 48.4 12.5 116 204-327 62-195 (668)
168 1jmx_B Amine dehydrogenase; ox 95.2 0.34 1.2E-05 41.6 13.2 144 100-266 9-176 (349)
169 2xbg_A YCF48-like protein; pho 95.2 1.4 4.7E-05 38.1 22.7 211 55-295 46-268 (327)
170 3frx_A Guanine nucleotide-bind 95.2 1 3.6E-05 38.4 16.1 134 66-230 86-229 (319)
171 2pm7_B Protein transport prote 95.2 0.81 2.8E-05 38.6 15.1 106 101-229 20-133 (297)
172 1w6s_A Methanol dehydrogenase 95.0 1 3.4E-05 42.7 16.5 112 153-271 56-201 (599)
173 2p4o_A Hypothetical protein; p 95.0 1.4 4.9E-05 37.4 24.2 213 55-295 42-277 (306)
174 3azo_A Aminopeptidase; POP fam 95.0 2.5 8.6E-05 40.1 21.7 249 55-327 90-375 (662)
175 3v65_B Low-density lipoprotein 94.9 1.9 6.3E-05 38.3 19.2 167 67-263 138-316 (386)
176 4ggc_A P55CDC, cell division c 94.9 1.4 4.9E-05 36.9 17.0 223 56-319 79-315 (318)
177 3lrv_A PRE-mRNA-splicing facto 94.9 1.7 5.7E-05 37.4 19.3 100 159-265 138-244 (343)
178 2ynn_A Coatomer subunit beta'; 94.8 0.55 1.9E-05 39.8 13.1 177 66-273 76-267 (304)
179 1kb0_A Quinohemoprotein alcoho 94.8 0.29 9.9E-06 47.2 12.3 116 204-327 73-207 (677)
180 3e5z_A Putative gluconolactona 94.8 1.6 5.4E-05 36.7 16.5 194 55-265 79-286 (296)
181 1yiq_A Quinohemoprotein alcoho 94.8 0.3 1E-05 47.2 12.3 116 204-327 66-200 (689)
182 2ghs_A AGR_C_1268P; regucalcin 94.7 1.8 6.2E-05 37.2 19.3 181 55-265 60-260 (326)
183 2ast_B S-phase kinase-associat 94.7 0.01 3.4E-07 51.8 1.7 40 3-42 7-46 (336)
184 3fm0_A Protein CIAO1; WDR39,SG 94.7 0.12 4.2E-06 45.0 8.8 153 159-331 27-191 (345)
185 1ijq_A LDL receptor, low-densi 94.6 1.9 6.5E-05 36.9 18.8 180 55-265 41-238 (316)
186 2p4o_A Hypothetical protein; p 94.6 1.9 6.3E-05 36.7 19.0 146 95-264 35-197 (306)
187 3iz6_a 40S ribosomal protein R 94.5 2.2 7.6E-05 37.4 19.9 143 160-320 170-330 (380)
188 3hxj_A Pyrrolo-quinoline quino 94.5 0.35 1.2E-05 41.3 11.3 123 129-269 41-173 (330)
189 1flg_A Protein (quinoprotein e 94.5 0.82 2.8E-05 43.2 14.3 115 204-326 64-200 (582)
190 1flg_A Protein (quinoprotein e 94.4 2.1 7.1E-05 40.4 17.1 108 153-268 62-200 (582)
191 3v64_C Agrin; beta propeller, 94.4 2.3 7.9E-05 37.1 21.0 178 55-263 84-273 (349)
192 2vdu_B TRNA (guanine-N(7)-)-me 94.4 2.7 9.2E-05 37.7 22.6 237 55-325 114-397 (450)
193 1qks_A Cytochrome CD1 nitrite 94.4 1.1 3.6E-05 42.3 14.8 185 55-269 166-377 (567)
194 3sov_A LRP-6, low-density lipo 94.4 2.2 7.7E-05 36.6 20.7 193 66-293 12-224 (318)
195 2hes_X YDR267CP; beta-propelle 94.3 0.94 3.2E-05 38.9 13.6 63 159-228 164-230 (330)
196 3gre_A Serine/threonine-protei 94.3 0.69 2.4E-05 41.3 13.1 99 159-265 181-292 (437)
197 2dg1_A DRP35, lactonase; beta 94.2 0.65 2.2E-05 39.8 12.3 143 101-264 55-212 (333)
198 3mmy_A MRNA export factor; mRN 94.2 0.95 3.2E-05 38.9 13.5 129 128-265 64-199 (368)
199 1w6s_A Methanol dehydrogenase 94.2 0.52 1.8E-05 44.7 12.3 118 204-328 58-200 (599)
200 1pgu_A Actin interacting prote 94.1 2.3 8E-05 39.5 16.9 139 160-319 456-614 (615)
201 3dm0_A Maltose-binding peripla 94.1 2.2 7.6E-05 40.9 17.0 182 101-320 441-633 (694)
202 3ott_A Two-component system se 94.1 2.1 7.3E-05 41.6 17.0 137 101-265 482-626 (758)
203 3mkq_A Coatomer beta'-subunit; 94.0 0.82 2.8E-05 44.6 14.0 183 58-269 69-263 (814)
204 3i2n_A WD repeat-containing pr 94.0 0.62 2.1E-05 40.0 11.7 129 128-265 44-199 (357)
205 2fp8_A Strictosidine synthase; 93.9 1.4 4.7E-05 37.7 13.7 194 55-264 91-312 (322)
206 1erj_A Transcriptional repress 93.7 1.4 4.8E-05 38.9 13.8 98 159-265 134-238 (393)
207 3dm0_A Maltose-binding peripla 93.6 2 7E-05 41.1 15.7 96 161-265 532-632 (694)
208 3fvz_A Peptidyl-glycine alpha- 93.6 3.1 0.00011 35.6 26.7 181 128-320 69-278 (329)
209 3dr2_A Exported gluconolactona 93.6 2.8 9.4E-05 35.5 14.9 183 55-265 56-267 (305)
210 2z3z_A Dipeptidyl aminopeptida 93.5 5.4 0.00018 38.1 18.7 150 66-235 234-398 (706)
211 2aq5_A Coronin-1A; WD40 repeat 93.5 3.5 0.00012 36.3 16.0 185 56-265 94-299 (402)
212 3m0c_C LDL receptor, low-densi 93.5 6.3 0.00021 38.6 19.5 142 96-264 475-631 (791)
213 4a11_B DNA excision repair pro 93.4 0.36 1.2E-05 42.4 9.3 98 159-265 111-218 (408)
214 3hrp_A Uncharacterized protein 93.4 4 0.00014 36.4 16.3 156 55-234 182-360 (409)
215 2hz6_A Endoplasmic reticulum t 93.4 0.077 2.6E-06 47.0 4.8 139 156-326 6-156 (369)
216 3b7f_A Glycosyl hydrolase, BNR 93.3 4 0.00014 36.0 24.0 213 55-294 22-297 (394)
217 1n7d_A LDL receptor, low-densi 93.2 1.6 5.6E-05 42.1 14.2 147 100-272 463-621 (699)
218 3hrp_A Uncharacterized protein 93.2 4.4 0.00015 36.1 19.5 145 96-265 135-298 (409)
219 2bkl_A Prolyl endopeptidase; m 93.1 6.2 0.00021 37.8 18.2 187 66-264 146-350 (695)
220 2xyi_A Probable histone-bindin 93.0 2.6 8.8E-05 37.7 14.5 97 162-265 196-309 (430)
221 2ymu_A WD-40 repeat protein; u 92.9 2.7 9.1E-05 38.9 14.9 209 67-320 325-540 (577)
222 3p5b_L Low density lipoprotein 92.9 4.9 0.00017 35.8 17.9 144 96-265 163-320 (400)
223 2xdw_A Prolyl endopeptidase; a 92.7 7.3 0.00025 37.4 22.8 190 68-265 152-368 (710)
224 3frx_A Guanine nucleotide-bind 92.6 1 3.6E-05 38.4 10.9 140 159-320 76-228 (319)
225 2fp8_A Strictosidine synthase; 92.5 4.4 0.00015 34.5 20.4 228 56-320 31-314 (322)
226 3bg1_A Protein SEC13 homolog; 92.5 0.54 1.9E-05 40.2 8.9 99 128-233 35-142 (316)
227 2p1m_B Transport inhibitor res 92.4 0.04 1.4E-06 52.1 1.6 36 3-38 4-40 (594)
228 2bkl_A Prolyl endopeptidase; m 92.3 8.3 0.00028 36.9 23.4 241 55-319 79-351 (695)
229 2ymu_A WD-40 repeat protein; u 92.2 6.3 0.00022 36.3 16.5 127 128-265 284-416 (577)
230 3f3f_A Nucleoporin SEH1; struc 92.2 3.1 0.00011 35.0 13.4 96 128-230 33-145 (351)
231 3iuj_A Prolyl endopeptidase; h 91.6 9.8 0.00034 36.5 20.8 187 66-265 154-359 (693)
232 1itv_A MMP9; adaptive molecula 91.6 4.2 0.00014 32.2 13.9 136 96-265 11-174 (195)
233 1qks_A Cytochrome CD1 nitrite 91.6 8.8 0.0003 36.0 16.6 138 175-320 319-478 (567)
234 3c5m_A Oligogalacturonate lyas 91.4 5.4 0.00018 34.6 14.3 147 66-234 167-335 (396)
235 3oyo_A Hemopexin fold protein 91.3 5.1 0.00017 32.5 12.8 55 208-264 127-197 (225)
236 3dr2_A Exported gluconolactona 91.2 6.1 0.00021 33.2 14.1 196 55-262 96-303 (305)
237 1pby_B Quinohemoprotein amine 91.1 2.8 9.5E-05 35.4 11.9 93 176-269 11-128 (337)
238 3azo_A Aminopeptidase; POP fam 90.9 7.4 0.00025 36.8 15.8 146 67-235 217-376 (662)
239 1pgu_A Actin interacting prote 90.9 8 0.00027 35.8 15.8 143 58-228 458-614 (615)
240 3vu4_A KMHSV2; beta-propeller 90.9 7.4 0.00025 33.6 16.2 167 128-320 81-272 (355)
241 3iz6_a 40S ribosomal protein R 90.8 7.7 0.00026 33.8 19.5 143 65-231 178-332 (380)
242 3c5m_A Oligogalacturonate lyas 90.7 1.9 6.6E-05 37.5 10.8 134 127-265 167-329 (396)
243 2mad_H Methylamine dehydrogena 90.7 8.1 0.00028 33.9 24.4 61 247-320 278-351 (373)
244 2xbg_A YCF48-like protein; pho 90.7 7.3 0.00025 33.4 22.8 208 55-295 89-311 (327)
245 3c75_H MADH, methylamine dehyd 90.5 7.2 0.00025 35.1 14.2 60 247-320 330-403 (426)
246 2ecf_A Dipeptidyl peptidase IV 90.5 13 0.00043 35.7 17.9 99 68-192 65-188 (741)
247 3pe7_A Oligogalacturonate lyas 90.4 8.1 0.00028 33.4 15.1 159 55-234 47-231 (388)
248 3sov_A LRP-6, low-density lipo 90.4 7.8 0.00027 33.2 20.0 144 96-265 83-238 (318)
249 3pe7_A Oligogalacturonate lyas 90.2 7.9 0.00027 33.5 14.3 153 67-235 168-336 (388)
250 2xzm_R RACK1; ribosome, transl 89.9 8.6 0.00029 32.8 14.8 21 208-228 224-244 (343)
251 3iuj_A Prolyl endopeptidase; h 89.8 13 0.00044 35.7 16.5 183 127-327 154-365 (693)
252 4a0p_A LRP6, LRP-6, low-densit 89.8 14 0.00047 35.1 18.9 177 55-264 48-236 (628)
253 1fwx_A Nitrous oxide reductase 89.8 4.7 0.00016 37.9 12.6 275 55-343 101-452 (595)
254 3gre_A Serine/threonine-protei 89.7 10 0.00035 33.5 15.7 95 128-230 192-294 (437)
255 1pex_A Collagenase-3, MMP-13; 89.6 6.8 0.00023 31.3 19.3 140 96-265 28-192 (207)
256 3tc9_A Hypothetical hydrolase; 89.4 12 0.0004 33.7 16.9 145 55-227 149-300 (430)
257 4a0p_A LRP6, LRP-6, low-densit 89.2 15 0.00052 34.8 25.2 195 66-294 14-224 (628)
258 1su3_A Interstitial collagenas 89.0 13 0.00044 33.7 15.4 135 96-265 267-432 (450)
259 3sjl_D Methylamine dehydrogena 88.7 12 0.00042 33.0 15.7 60 247-320 291-364 (386)
260 2xdw_A Prolyl endopeptidase; a 88.6 18 0.0006 34.7 20.4 241 55-320 83-369 (710)
261 1k32_A Tricorn protease; prote 88.5 15 0.00051 37.1 16.5 141 66-235 316-468 (1045)
262 2ghs_A AGR_C_1268P; regucalcin 88.3 11 0.00038 32.0 16.5 151 55-229 100-261 (326)
263 3ogk_B Coronatine-insensitive 87.4 0.16 5.4E-06 47.9 1.1 34 5-38 13-47 (592)
264 3o4h_A Acylamino-acid-releasin 87.4 3.7 0.00012 38.3 10.6 170 68-265 133-315 (582)
265 2z3z_A Dipeptidyl aminopeptida 86.7 22 0.00076 33.8 20.5 139 175-328 234-398 (706)
266 3c7x_A Matrix metalloproteinas 86.6 10 0.00035 29.9 12.6 143 97-273 11-183 (196)
267 1mda_H Methylamine dehydrogena 86.5 8.1 0.00028 34.0 11.6 240 53-341 74-363 (368)
268 2ece_A 462AA long hypothetical 85.4 21 0.00072 32.3 18.1 73 55-139 95-175 (462)
269 1nr0_A Actin interacting prote 84.5 26 0.00091 32.7 17.0 181 58-265 162-355 (611)
270 3o4h_A Acylamino-acid-releasin 83.8 27 0.00093 32.3 16.3 134 175-327 89-233 (582)
271 4h5i_A Guanine nucleotide-exch 83.7 21 0.00071 30.9 13.6 171 128-319 157-343 (365)
272 2qe8_A Uncharacterized protein 83.5 8.2 0.00028 33.2 10.2 76 55-143 77-161 (343)
273 1hxn_A Hemopexin, HPX; heme, b 82.3 18 0.00061 29.1 14.6 97 158-265 71-197 (219)
274 3lrv_A PRE-mRNA-splicing facto 81.8 23 0.00079 30.0 20.5 93 128-230 149-246 (343)
275 1yr2_A Prolyl oligopeptidase; 81.8 38 0.0013 32.6 20.7 188 67-264 189-394 (741)
276 2xyi_A Probable histone-bindin 81.4 18 0.00061 32.0 11.9 144 58-228 196-353 (430)
277 2xzm_R RACK1; ribosome, transl 81.1 25 0.00084 29.9 19.0 128 128-264 98-243 (343)
278 3c7x_A Matrix metalloproteinas 80.7 19 0.00065 28.3 11.1 98 207-320 60-176 (196)
279 1yr2_A Prolyl oligopeptidase; 80.6 38 0.0013 32.6 14.7 156 55-235 279-448 (741)
280 1k32_A Tricorn protease; prote 77.9 61 0.0021 32.6 19.5 144 177-328 318-468 (1045)
281 3lp9_A LS-24; SEED albumin, pl 77.5 27 0.00091 28.2 11.7 61 159-229 129-202 (227)
282 3lp9_A LS-24; SEED albumin, pl 77.0 23 0.00079 28.6 10.1 20 208-229 129-148 (227)
283 3tc9_A Hypothetical hydrolase; 76.7 11 0.00037 33.9 8.9 128 128-264 159-300 (430)
284 2p9w_A MAL S 1 allergenic prot 76.2 37 0.0013 29.2 23.9 232 55-298 24-306 (334)
285 1nr0_A Actin interacting prote 75.9 51 0.0018 30.7 20.7 97 128-232 170-274 (611)
286 1pex_A Collagenase-3, MMP-13; 75.9 28 0.00096 27.6 12.3 103 202-320 27-146 (207)
287 2ecf_A Dipeptidyl peptidase IV 75.7 56 0.0019 31.1 20.1 89 177-265 264-369 (741)
288 4h5i_A Guanine nucleotide-exch 74.4 41 0.0014 28.9 17.9 183 56-263 146-341 (365)
289 1su3_A Interstitial collagenas 73.7 52 0.0018 29.7 14.5 135 155-320 268-433 (450)
290 2oaj_A Protein SNI1; WD40 repe 73.5 67 0.0023 31.8 14.4 92 128-231 39-132 (902)
291 3s94_A LRP-6, low-density lipo 73.3 63 0.0021 30.5 22.6 196 67-294 326-538 (619)
292 3s94_A LRP-6, low-density lipo 73.0 64 0.0022 30.4 20.5 178 56-265 361-551 (619)
293 1hxn_A Hemopexin, HPX; heme, b 71.2 38 0.0013 27.1 15.7 121 158-295 27-187 (219)
294 1gen_A Gelatinase A; hydrolase 70.8 22 0.00077 28.5 8.5 100 202-320 34-154 (218)
295 4hw6_A Hypothetical protein, I 69.1 63 0.0022 28.8 18.7 184 55-265 152-374 (433)
296 1jof_A Carboxy-CIS,CIS-muconat 67.3 59 0.002 27.8 13.0 27 55-82 156-183 (365)
297 2qe8_A Uncharacterized protein 66.4 60 0.002 27.5 14.9 224 55-296 27-310 (343)
298 2cn3_A Xyloglucanase, beta-1,4 66.1 97 0.0033 29.8 17.2 124 136-271 554-695 (737)
299 1itv_A MMP9; adaptive molecula 64.2 50 0.0017 25.8 13.7 102 203-320 11-128 (195)
300 4hw6_A Hypothetical protein, I 64.0 80 0.0027 28.1 12.8 20 208-227 354-373 (433)
301 3sjl_D Methylamine dehydrogena 63.8 36 0.0012 30.0 9.0 72 159-232 291-367 (386)
302 2be1_A Serine/threonine-protei 60.9 30 0.001 29.9 7.8 108 207-327 9-138 (339)
303 1ck7_A Protein (gelatinase A); 60.6 32 0.0011 32.5 8.5 134 96-265 448-615 (631)
304 2oiz_A Aromatic amine dehydrog 59.9 83 0.0028 27.0 19.4 71 247-336 265-350 (361)
305 3c75_H MADH, methylamine dehyd 59.1 47 0.0016 29.7 9.1 110 159-273 84-217 (426)
306 3ba0_A Macrophage metalloelast 57.8 96 0.0033 27.0 17.1 138 96-265 185-350 (365)
307 1gen_A Gelatinase A; hydrolase 57.8 71 0.0024 25.5 17.8 97 159-265 87-202 (218)
308 3b7f_A Glycosyl hydrolase, BNR 56.9 97 0.0033 26.8 23.2 156 55-236 67-270 (394)
309 2xe4_A Oligopeptidase B; hydro 56.6 1.4E+02 0.0049 28.7 16.0 158 55-235 282-465 (751)
310 2dae_A KIAA0733 protein; mitog 53.2 14 0.00047 23.5 3.1 30 5-34 21-50 (75)
311 2oit_A Nucleoporin 214KDA; NH2 53.0 97 0.0033 27.4 10.3 60 160-227 162-222 (434)
312 3dw8_B Serine/threonine-protei 51.8 66 0.0022 28.0 9.0 23 159-187 39-61 (447)
313 2gop_A Trilobed protease; beta 50.0 1.1E+02 0.0038 25.4 13.1 174 66-269 42-257 (347)
314 3dw8_B Serine/threonine-protei 48.9 1.3E+02 0.0045 26.0 11.6 28 207-234 352-379 (447)
315 4d9s_A UVB-resistance protein 48.3 1.4E+02 0.0048 26.1 12.6 17 279-295 338-355 (406)
316 3ju4_A Endo-N-acetylneuraminid 48.2 1.5E+02 0.0051 26.4 20.2 119 136-255 268-405 (670)
317 3vu4_A KMHSV2; beta-propeller 45.8 1.4E+02 0.0047 25.3 21.9 176 55-264 70-270 (355)
318 1ck7_A Protein (gelatinase A); 45.4 34 0.0012 32.4 6.0 91 202-295 447-556 (631)
319 3sre_A PON1, serum paraoxonase 44.5 1.6E+02 0.0053 25.5 13.7 175 129-318 84-297 (355)
320 2oaj_A Protein SNI1; WD40 repe 44.4 1.9E+02 0.0065 28.5 11.6 25 208-232 222-246 (902)
321 2cn3_A Xyloglucanase, beta-1,4 40.5 2.5E+02 0.0087 26.9 22.4 230 76-332 10-294 (737)
322 2p9w_A MAL S 1 allergenic prot 39.6 1.8E+02 0.0062 24.9 14.8 135 97-255 142-303 (334)
323 2mad_H Methylamine dehydrogena 39.1 1.9E+02 0.0064 24.9 22.4 78 208-286 278-370 (373)
324 1xfd_A DIP, dipeptidyl aminope 38.4 2.5E+02 0.0087 26.3 14.8 111 66-191 36-149 (723)
325 4gq1_A NUP37; propeller, trans 36.5 2E+02 0.007 24.6 9.9 105 57-187 102-220 (393)
326 3kya_A Putative phosphatase; s 35.6 2.6E+02 0.0088 25.5 11.9 112 96-227 143-277 (496)
327 3oyo_A Hemopexin fold protein 35.1 1E+02 0.0036 24.6 6.7 58 247-318 127-197 (225)
328 2be1_A Serine/threonine-protei 32.0 48 0.0016 28.6 4.4 91 178-270 22-139 (339)
329 3qhy_B Beta-lactamase inhibito 31.5 75 0.0026 26.4 5.5 18 152-169 34-51 (282)
330 1sqj_A OXG-RCBH, oligoxylogluc 30.6 3.8E+02 0.013 25.9 24.6 227 77-332 4-280 (789)
331 3ba0_A Macrophage metalloelast 30.1 2.7E+02 0.0092 24.1 15.3 62 159-233 284-355 (365)
332 1xfd_A DIP, dipeptidyl aminope 29.9 3.5E+02 0.012 25.3 12.0 59 176-234 228-295 (723)
333 3ei3_A DNA damage-binding prot 25.9 5.5E+02 0.019 26.3 15.1 103 127-239 863-968 (1158)
334 3amr_A 3-phytase; beta-propell 25.9 3.2E+02 0.011 23.6 13.7 135 128-270 99-269 (355)
335 2lyd_A Decapping protein 1; DC 25.7 54 0.0018 24.0 3.1 28 218-255 37-64 (134)
336 3ei3_A DNA damage-binding prot 24.0 6E+02 0.02 26.0 12.7 133 66-226 863-999 (1158)
337 3kya_A Putative phosphatase; s 22.6 4.4E+02 0.015 24.0 13.0 100 159-264 151-277 (496)
338 2qkl_A DCP1 protein, SPBC3B9.2 21.5 31 0.0011 25.0 1.1 28 218-255 32-59 (127)
339 4d9s_A UVB-resistance protein 20.9 4.1E+02 0.014 23.0 8.8 16 94-109 183-199 (406)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-45 Score=327.22 Aligned_cols=273 Identities=21% Similarity=0.374 Sum_probs=236.2
Q ss_pred HHHhcCCCCcEEEEEec---CCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCC
Q 019186 47 ARQEVGSSENLLCVCAF---DPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDG 123 (345)
Q Consensus 47 ~~~~~~~~~~~l~v~gg---~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 123 (345)
...+....++.||++|| ...+++++||+.+++|+.++++|.+ |.++++++.+++|||+||..... ..
T Consensus 16 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~-------~~ 85 (308)
T 1zgk_A 16 RGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVP---RSGLAGCVVGGLLYAVGGRNNSP-------DG 85 (308)
T ss_dssp -----CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCEEEET-------TE
T ss_pred CCccccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcc---cccceEEEECCEEEEECCCcCCC-------CC
Confidence 33444456899999999 3467899999999999999998876 88999999999999999973100 01
Q ss_pred CcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee
Q 019186 124 SFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT 203 (345)
Q Consensus 124 ~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 203 (345)
....+++++||+.+++|+++++++.+|..+++++++++||++||.... ...+++++||+.+++|+.++++|.+ +..++
T Consensus 86 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~ 163 (308)
T 1zgk_A 86 NTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLTR-RIGVG 163 (308)
T ss_dssp EEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSSC-CBSCE
T ss_pred CeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCcc-ccceE
Confidence 124688999999999999999999999999999999999999998753 4578899999999999999999999 88999
Q ss_pred EEEECCEEEEEec-----CcceEEEEECCCCCeeeccCCCC---CCceEEEcCeEEEEeC-------cEEEEecCCc--e
Q 019186 204 GVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--R 266 (345)
Q Consensus 204 ~~~~~~~iyv~gG-----~~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~~~~l~~~~~-------~~i~~~d~~~--W 266 (345)
+++++++||++|| ..+++++||+.+++|+.++.++. .++++.++++||++|| ..++.||+++ |
T Consensus 164 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 164 VAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 9999999999999 36789999999999999876655 6788889999999998 6799999987 9
Q ss_pred EEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCCCcceeEEeeeee
Q 019186 267 KVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 343 (345)
Q Consensus 267 ~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~~r~~~~~~~~~ 343 (345)
++++.+| .+|..|+++.++++|||+||.+.. ...+++++||++++ +|.++++||.+|.. ++||++
T Consensus 244 ~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~--~W~~~~~~p~~r~~-~~~~~l 308 (308)
T 1zgk_A 244 TFVAPMK--HRRSALGITVHQGRIYVLGGYDGH-------TFLDSVECYDPDTD--TWSEVTRMTSGRSG-VGVAVT 308 (308)
T ss_dssp EECCCCS--SCCBSCEEEEETTEEEEECCBCSS-------CBCCEEEEEETTTT--EEEEEEECSSCCBS-CEEEEC
T ss_pred EECCCCC--CCccceEEEEECCEEEEEcCcCCC-------cccceEEEEcCCCC--EEeecCCCCCCccc-ceeEeC
Confidence 9999887 688999999999999999998764 46789999999999 99999999999998 788764
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.3e-45 Score=323.03 Aligned_cols=262 Identities=17% Similarity=0.246 Sum_probs=235.7
Q ss_pred CcEEEEEecCC-CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDP-ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
.+.||++||.. .++++.||+.+++|+.++++|.+ |.+|++++++++|||+||.. . ...+++++|
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~-~-----------~~~~~~~~~ 75 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEK---RRDAACVFWDNVVYILGGSQ-L-----------FPIKRMDCY 75 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCC---CBSCEEEEETTEEEEECCBS-S-----------SBCCEEEEE
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcc---cceeEEEEECCEEEEEeCCC-C-----------CCcceEEEE
Confidence 57899999843 78999999999999999999886 89999999999999999975 1 157899999
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHV 213 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv 213 (345)
|+.+++|+.++++|.+|..|++++++++||++||.+......+++++||+.+++|+.++++|.+ +..++++.++++||+
T Consensus 76 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv 154 (306)
T 3ii7_A 76 NVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ-RCSHGMVEANGLIYV 154 (306)
T ss_dssp ETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEE
T ss_pred eCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC-cceeEEEEECCEEEE
Confidence 9999999999999999999999999999999999874456688999999999999999999999 889999999999999
Q ss_pred Eec-----C----cceEEEEECCCCCeeeccCCCC---CCceEEEcCeEEEEeC-------cEEEEecCCc--eEEeccc
Q 019186 214 LHK-----G----LSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVASA 272 (345)
Q Consensus 214 ~gG-----~----~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~~~~l~~~~~-------~~i~~~d~~~--W~~~~~~ 272 (345)
+|| . .+++++||+.+++|+.+++++. .+.++.++++||++|| ..++.||+++ |++++.+
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 234 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM 234 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC
T ss_pred ECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC
Confidence 999 2 7889999999999999987665 7788889999999998 5789999987 9999988
Q ss_pred hhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCCCcceeEEeeeeee
Q 019186 273 SEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQLR 344 (345)
Q Consensus 273 p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~~r~~~~~~~~~~ 344 (345)
| .+|..|+++.++++|||+||.++. ...+++++||++++ +|.++++||.+|.. |++++++
T Consensus 235 p--~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~~~~yd~~~~--~W~~~~~~~~~r~~-~~~~~~~ 294 (306)
T 3ii7_A 235 P--WKGVTVKCAAVGSIVYVLAGFQGV-------GRLGHILEYNTETD--KWVANSKVRAFPVT-SCLICVV 294 (306)
T ss_dssp S--CCBSCCEEEEETTEEEEEECBCSS-------SBCCEEEEEETTTT--EEEEEEEEECCSCT-TCEEEEE
T ss_pred C--CCccceeEEEECCEEEEEeCcCCC-------eeeeeEEEEcCCCC--eEEeCCCcccccce-eEEEEEC
Confidence 8 689999999999999999998765 36789999999999 99999999999998 6777653
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.2e-45 Score=321.01 Aligned_cols=263 Identities=23% Similarity=0.357 Sum_probs=233.5
Q ss_pred CCcEEEEEecCC---CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCce
Q 019186 54 SENLLCVCAFDP---ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEV 130 (345)
Q Consensus 54 ~~~~l~v~gg~~---~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (345)
.++.||++||.. .+++++||+.+++|+.++++|.+ |.+|++++.+++|||+||..... ..+++
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~-----------~~~~~ 79 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSR---RCRAGMVYMAGLVFAVGGFNGSL-----------RVRTV 79 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEESCBCSSS-----------BCCCE
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcc---cccceEEEECCEEEEEeCcCCCc-----------cccce
Confidence 478999999943 57899999999999999999876 88999999999999999975322 46899
Q ss_pred EEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCE
Q 019186 131 WSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGK 210 (345)
Q Consensus 131 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 210 (345)
++||+.+++|+.+++++.+|..|++++++++||++||.... ...+++++||+.+++|+.++++|.+ +..+++++++++
T Consensus 80 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~ 157 (302)
T 2xn4_A 80 DSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTR-RSSVGVGVVGGL 157 (302)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSC-CBSCEEEEETTE
T ss_pred EEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCc-ccCceEEEECCE
Confidence 99999999999999999999999999999999999998753 4568999999999999999999999 889999999999
Q ss_pred EEEEecC-------cceEEEEECCCCCeeeccCCCC---CCceEEEcCeEEEEeC-------cEEEEecCCc--eEEecc
Q 019186 211 VHVLHKG-------LSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVAS 271 (345)
Q Consensus 211 iyv~gG~-------~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~~~~l~~~~~-------~~i~~~d~~~--W~~~~~ 271 (345)
||++||. .+++++||+.+++|+.++.++. .++++.++++||++|| ..++.||+++ |++++.
T Consensus 158 iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 158 LYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp EEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC
Confidence 9999991 5789999999999999876655 6788889999999998 5799999987 999998
Q ss_pred chhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcC-CCCCcceeEEeeeeee
Q 019186 272 ASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVS-PMTRCRGTILGCTQLR 344 (345)
Q Consensus 272 ~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~-~~~~~r~~~~~~~~~~ 344 (345)
+| .+|..|+++.++++||++||.++. ...+++++||++++ +|.+++ +||.+|.. |+++++.
T Consensus 238 ~~--~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~--~W~~~~~~~~~~r~~-~~~~~~~ 299 (302)
T 2xn4_A 238 MN--MCRRNAGVCAVNGLLYVVGGDDGS-------CNLASVEYYNPTTD--KWTVVSSCMSTGRSY-AGVTVID 299 (302)
T ss_dssp CS--SCCBSCEEEEETTEEEEECCBCSS-------SBCCCEEEEETTTT--EEEECSSCCSSCCBS-CEEEEEE
T ss_pred CC--CccccCeEEEECCEEEEECCcCCC-------cccccEEEEcCCCC--eEEECCcccCccccc-ceEEEec
Confidence 87 688899999999999999998764 36789999999999 999997 89999998 7887763
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.2e-44 Score=315.33 Aligned_cols=263 Identities=24% Similarity=0.352 Sum_probs=234.8
Q ss_pred CCcEEEEEec-C----CCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 54 SENLLCVCAF-D----PENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 54 ~~~~l~v~gg-~----~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
.++.||++|| . ..++++.||+.+++|+.++++|.+ |.+|++++.+++||++||.... ...+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~l~v~GG~~~~-----------~~~~ 78 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRK---RRYVASVSLHDRIYVIGGYDGR-----------SRLS 78 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCBCSS-----------CBCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChh---hccccEEEECCEEEEEcCCCCC-----------ccCc
Confidence 4789999999 3 267899999999999999988876 8899999999999999997532 2578
Q ss_pred ceEEEeCCCCC---cccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE
Q 019186 129 EVWSYDPVTRQ---WSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV 205 (345)
Q Consensus 129 ~~~~yd~~t~~---W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~ 205 (345)
++++||+.+++ |+.++++|.+|..|++++++++||++||..+. ...+++++||+.+++|+.++++|.+ +..++++
T Consensus 79 ~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~ 156 (301)
T 2vpj_A 79 SVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTA-REGAGLV 156 (301)
T ss_dssp CEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSC-CBSCEEE
T ss_pred eEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCC-cccceEE
Confidence 99999999999 99999999999999999999999999998754 4478999999999999999999988 8889999
Q ss_pred EECCEEEEEec-----CcceEEEEECCCCCeeeccCCCC---CCceEEEcCeEEEEeC-------cEEEEecCCc--eEE
Q 019186 206 VIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKV 268 (345)
Q Consensus 206 ~~~~~iyv~gG-----~~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~~~~l~~~~~-------~~i~~~d~~~--W~~ 268 (345)
+++++||++|| ..+++++||+.+++|+.++.++. .++++..+++||++|| ..++.||+++ |++
T Consensus 157 ~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 157 VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred EECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 99999999999 36789999999999999876655 6788889999999998 5799999987 999
Q ss_pred eccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCCCcceeEEeeeeee
Q 019186 269 VASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQLR 344 (345)
Q Consensus 269 ~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~~r~~~~~~~~~~ 344 (345)
++.+| .+|..|+++.++++||++||.++. ...+++++||++++ +|.++++||.+|.. |+|+++.
T Consensus 237 ~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~--~W~~~~~~~~~r~~-~~~~~~~ 300 (301)
T 2vpj_A 237 VTSMT--TPRCYVGATVLRGRLYAIAGYDGN-------SLLSSIECYDPIID--SWEVVTSMGTQRCD-AGVCVLR 300 (301)
T ss_dssp ECCCS--SCCBSCEEEEETTEEEEECCBCSS-------SBEEEEEEEETTTT--EEEEEEEEEEEEES-CEEEEEE
T ss_pred CCCCC--CcccceeEEEECCEEEEEcCcCCC-------cccccEEEEcCCCC--eEEEcCCCCccccc-ceEEEeC
Confidence 99887 688999999999999999997765 36679999999999 99999999999998 7888764
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=308.21 Aligned_cols=271 Identities=16% Similarity=0.180 Sum_probs=225.3
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
++.|+++|| ++++.|||.+++|+. +++|.+ .+|.+|++++.+++|||+||.....+ .......+++++||
T Consensus 4 ~~~l~~~GG---~~~~~yd~~~~~W~~-~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~-----~~~~~~~~~~~~~d 73 (315)
T 4asc_A 4 QDLIFMISE---EGAVAYDPAANECYC-ASLSSQ-VPKNHVSLVTKENQVFVAGGLFYNED-----NKEDPMSAYFLQFD 73 (315)
T ss_dssp EEEEEEEET---TEEEEEETTTTEEEE-EECCCC-SCSSEEEEECTTCCEEEEEEEEECSS-----CSSSCEEEEEEEEE
T ss_pred ceEEEEEcC---CceEEECCCCCeEec-CCCCCC-CCccceEEEEECCEEEEEcCcccCCC-----CCccccccceEEec
Confidence 568999998 789999999999987 666543 24899999999999999999621110 01122356699999
Q ss_pred CCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcC--CCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEE
Q 019186 135 PVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFT--SCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVH 212 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~--~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iy 212 (345)
+.+++|+.++++|.+|..|++++++++||++||.. ......+++++||+.+++|+.++++|.+ |..+++++++++||
T Consensus 74 ~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iy 152 (315)
T 4asc_A 74 HLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV-VYGHTVLSHMDLVY 152 (315)
T ss_dssp TTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTEEE
T ss_pred CCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc-ccceeEEEECCEEE
Confidence 99999999999999999999999999999999975 2345688999999999999999999999 89999999999999
Q ss_pred EEec------CcceEEEEECCCCCeeeccCCCC---CCceEEEcCeEEEEeC-------cEEEEecCCc--eEEeccchh
Q 019186 213 VLHK------GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVASASE 274 (345)
Q Consensus 213 v~gG------~~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~~~~l~~~~~-------~~i~~~d~~~--W~~~~~~p~ 274 (345)
++|| ..+++++||+.+++|+.+++++. .++++.++++||++|| ..++.||+++ |++++.+|
T Consensus 153 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p- 231 (315)
T 4asc_A 153 VIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFP- 231 (315)
T ss_dssp EECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCS-
T ss_pred EEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCC-
Confidence 9999 35789999999999999987665 6788889999999998 4899999987 99999887
Q ss_pred hcccceeEEEEECCeEEEEcceecCCC--CcccccccCceeeeccCCCCCceeEcCCCCCcceeEEeeeee
Q 019186 275 FRRRIGFAMIGMGDDIYVIGGVIGPDR--WNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 343 (345)
Q Consensus 275 ~~~r~~~~~~~~~~~l~i~GG~~~~~~--~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~~r~~~~~~~~~ 343 (345)
.+|..|+++.++++||++||.+.... .......++++++||++++ +|.++ +|.+|.. ++++++
T Consensus 232 -~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~--~~~~r~~-~~~~~~ 296 (315)
T 4asc_A 232 -QERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK--KWEGV--LREIAYA-AGATFL 296 (315)
T ss_dssp -SCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT--EEEEE--ESCSSCC-SSCEEE
T ss_pred -CcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC--hhhhh--ccCCcCc-cceEEe
Confidence 68999999999999999999865211 0011135689999999999 99999 5666766 566554
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8.6e-42 Score=303.53 Aligned_cols=271 Identities=15% Similarity=0.221 Sum_probs=223.2
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
.+.||++|| .++++|||.+++|.. .+++.+ .+|.++++++.+++|||+||.....+ .......+++++||
T Consensus 15 ~~~i~~~GG---~~~~~yd~~~~~W~~-~~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~~~-----~~~~~~~~~~~~~d 84 (318)
T 2woz_A 15 KDLILLVND---TAAVAYDPMENECYL-TALAEQ-IPRNHSSIVTQQNQVYVVGGLYVDEE-----NKDQPLQSYFFQLD 84 (318)
T ss_dssp EEEEEEECS---SEEEEEETTTTEEEE-EEECTT-SCSSEEEEECSSSCEEEEESSCC------------CCCBEEEEEE
T ss_pred cchhhhccc---cceEEECCCCCceec-ccCCcc-CCccceEEEEECCEEEEECCcccCcc-----ccCCCccccEEEEe
Confidence 678999998 358999999999998 344432 24889999999999999999632110 00111245699999
Q ss_pred CCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCC-CCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEE
Q 019186 135 PVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTS-CRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHV 213 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~-~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv 213 (345)
+.+++|++++++|.+|..|++++++++||++||... .....+++++||+.+++|+.++++|.+ +..+++++++++||+
T Consensus 85 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv 163 (318)
T 2woz_A 85 NVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK-VYGHNVISHNGMIYC 163 (318)
T ss_dssp TTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC-EESCEEEEETTEEEE
T ss_pred CCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc-ccccEEEEECCEEEE
Confidence 999999999999999999999999999999999863 335578999999999999999999999 888999999999999
Q ss_pred Eec------CcceEEEEECCCCCeeeccCCCC---CCceEEEcCeEEEEeC-------cEEEEecCCc--eEEeccchhh
Q 019186 214 LHK------GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVASASEF 275 (345)
Q Consensus 214 ~gG------~~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~~~~l~~~~~-------~~i~~~d~~~--W~~~~~~p~~ 275 (345)
+|| ..+++++||+.+++|+.++.++. .+++++++++||++|| ..++.||+++ |++++.+|
T Consensus 164 ~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-- 241 (318)
T 2woz_A 164 LGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFP-- 241 (318)
T ss_dssp ECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCS--
T ss_pred EcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCC--
Confidence 999 35789999999999999976655 6788889999999998 5788999987 99999888
Q ss_pred cccceeEEEEECCeEEEEcceecCCCCcc--cccccCceeeeccCCCCCceeEcCCCCCcceeEEeeeee
Q 019186 276 RRRIGFAMIGMGDDIYVIGGVIGPDRWNW--DIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 343 (345)
Q Consensus 276 ~~r~~~~~~~~~~~l~i~GG~~~~~~~~~--~~~~~~~v~~yd~~~~~~~W~~v~~~~~~r~~~~~~~~~ 343 (345)
.+|..|+++.++++||++||.+....... .....+++++||++++ +|.++ +|.+|.. |+|+++
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~--~~~~r~~-~~~~~~ 306 (318)
T 2woz_A 242 QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK--EWAGM--LKEIRYA-SGASCL 306 (318)
T ss_dssp SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT--EEEEE--ESCCGGG-TTCEEE
T ss_pred CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC--Eehhh--ccccccc-ccceee
Confidence 58999999999999999999865321100 1135789999999999 99999 8888887 677765
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=6.2e-41 Score=302.72 Aligned_cols=261 Identities=18% Similarity=0.187 Sum_probs=214.5
Q ss_pred CCcEEEEEecCCCCeEEEEeCC--CCCEEeCCCCC-ccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCce
Q 019186 54 SENLLCVCAFDPENLWQLYDPL--RDLWITLPVLP-SKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEV 130 (345)
Q Consensus 54 ~~~~l~v~gg~~~~~~~~yd~~--~~~W~~~~~~~-~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (345)
.++.||++||...+++++||+. +++|+.++++| .+ |.+|++++++++|||+||.....+ ......+++
T Consensus 18 ~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~---R~~~~~~~~~~~lyv~GG~~~~~~------~~~~~~~~v 88 (357)
T 2uvk_A 18 DNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGP---RDQATSAFIDGNLYVFGGIGKNSE------GLTQVFNDV 88 (357)
T ss_dssp ETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCC---CBSCEEEEETTEEEEECCEEECTT------SCEEECCCE
T ss_pred ECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCc---CccceEEEECCEEEEEcCCCCCCC------ccceeeccE
Confidence 3899999999777899999998 49999999998 55 899999999999999999721000 122357899
Q ss_pred EEEeCCCCCcccCCCCC-CCceeeeeeEeCCeEEEEcCcCCCC---------------------------------CCCc
Q 019186 131 WSYDPVTRQWSPRASML-VPRAMFACCALKEKIVVAGGFTSCR---------------------------------KSIS 176 (345)
Q Consensus 131 ~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~gG~~~~~---------------------------------~~~~ 176 (345)
++||+.+++|+++++++ .+|..|++++.+++||++||..... ...+
T Consensus 89 ~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (357)
T 2uvk_A 89 HKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNK 168 (357)
T ss_dssp EEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCC
T ss_pred EEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcc
Confidence 99999999999999988 8999999999999999999976321 2468
Q ss_pred eEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEec------CcceEEEEEC--CCCCeeeccCCCC-----CCce
Q 019186 177 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK------GLSTVQVLDH--MGLGWTVEDYGWL-----QGPM 243 (345)
Q Consensus 177 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG------~~~~i~~yd~--~~~~W~~~~~~~~-----~~~~ 243 (345)
++++||+.+++|+.++++|.+++.++++++++++||++|| ....+++||+ .+++|+.++.++. .+++
T Consensus 169 ~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~ 248 (357)
T 2uvk_A 169 FLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFA 248 (357)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEE
T ss_pred cEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceE
Confidence 9999999999999999999874555888999999999999 2567888986 8999999876643 4558
Q ss_pred EEEcCeEEEEeCc------------------------EEEEecCCc--eEEeccchhhcccceeEEEEECCeEEEEccee
Q 019186 244 AIVHDSVYLMSHG------------------------LIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVI 297 (345)
Q Consensus 244 ~~~~~~l~~~~~~------------------------~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~ 297 (345)
+.++++||++||. .++.||+++ |++++.+| .+|..|+++.++++|||+||.+
T Consensus 249 ~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~ 326 (357)
T 2uvk_A 249 GISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS--QGRAYGVSLPWNNSLLIIGGET 326 (357)
T ss_dssp EEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS--SCCBSSEEEEETTEEEEEEEEC
T ss_pred EEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC--CCcccceeEEeCCEEEEEeeeC
Confidence 8899999999981 578899887 99999888 6888999999999999999988
Q ss_pred cCCCCcccccccCceeeeccCCCCCceeEcCCCCCc
Q 019186 298 GPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRC 333 (345)
Q Consensus 298 ~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~~ 333 (345)
..+ ..+++|++|+.+++ +|.++.++|..
T Consensus 327 ~~~------~~~~~v~~l~~~~~--~~~~~~~~~~~ 354 (357)
T 2uvk_A 327 AGG------KAVTDSVLITVKDN--KVTVQNLEHHH 354 (357)
T ss_dssp GGG------CEEEEEEEEEC-CC--SCEEEC-----
T ss_pred CCC------CEeeeEEEEEEcCc--EeEeeeccccc
Confidence 764 35789999999999 99999888754
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=4.3e-37 Score=271.98 Aligned_cols=227 Identities=19% Similarity=0.298 Sum_probs=196.1
Q ss_pred cceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcC--
Q 019186 92 LAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFT-- 169 (345)
Q Consensus 92 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~-- 169 (345)
|..++.+..+++||++||... . ..+++++||+.+++|+.++++|.+|..+++++++++||++||..
T Consensus 15 ~~~~~~~~~~~~i~v~GG~~~--~----------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~ 82 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGYFR--Q----------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNS 82 (308)
T ss_dssp ------CCCCCCEEEECCBSS--S----------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEE
T ss_pred eCCccccCCCCEEEEEeCcCC--C----------CcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCC
Confidence 778888889999999999721 1 46889999999999999999999999999999999999999983
Q ss_pred -CCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEec-----CcceEEEEECCCCCeeeccCCCC---C
Q 019186 170 -SCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---Q 240 (345)
Q Consensus 170 -~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG-----~~~~i~~yd~~~~~W~~~~~~~~---~ 240 (345)
......+++++||+.+++|+.++++|.+ |..+++++++++||++|| ..+++++||+.+++|+.+++.+. .
T Consensus 83 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 161 (308)
T 1zgk_A 83 PDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG 161 (308)
T ss_dssp TTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred CCCCeecceEEEECCCCCeEeECCCCCcC-ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccc
Confidence 2234568899999999999999999999 889999999999999999 35789999999999999977665 7
Q ss_pred CceEEEcCeEEEEeC-------cEEEEecCCc--eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCc
Q 019186 241 GPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSD 311 (345)
Q Consensus 241 ~~~~~~~~~l~~~~~-------~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~ 311 (345)
++++.++++||++|| ..++.||+++ |++++.+| .+|..|+++.++++||++||.++. ...++
T Consensus 162 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-------~~~~~ 232 (308)
T 1zgk_A 162 VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN--TIRSGAGVCVLHNCIYAAGGYDGQ-------DQLNS 232 (308)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEEETTEEEEECCBCSS-------SBCCC
T ss_pred eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC--CccccceEEEECCEEEEEeCCCCC-------Cccce
Confidence 788889999999998 5799999987 99999887 689999999999999999998765 35789
Q ss_pred eeeeccCCCCCceeEcCCCCCcceeEEeeeee
Q 019186 312 VDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 343 (345)
Q Consensus 312 v~~yd~~~~~~~W~~v~~~~~~r~~~~~~~~~ 343 (345)
+++||++++ +|.+++++|.+|.. ++++++
T Consensus 233 v~~yd~~~~--~W~~~~~~p~~r~~-~~~~~~ 261 (308)
T 1zgk_A 233 VERYDVETE--TWTFVAPMKHRRSA-LGITVH 261 (308)
T ss_dssp EEEEETTTT--EEEECCCCSSCCBS-CEEEEE
T ss_pred EEEEeCCCC--cEEECCCCCCCccc-eEEEEE
Confidence 999999999 99999999999987 676654
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.1e-36 Score=274.88 Aligned_cols=241 Identities=14% Similarity=0.161 Sum_probs=196.6
Q ss_pred eCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCC--CCCcccCCCCC-CCceeeeeeE
Q 019186 81 TLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPV--TRQWSPRASML-VPRAMFACCA 157 (345)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~--t~~W~~~~~~~-~~r~~~~~~~ 157 (345)
.+++||.+ |.++++++++++|||+||.. .+++++||+. +++|+.++++| .+|..|++++
T Consensus 2 ~l~~lP~~---r~~~~~~~~~~~iyv~GG~~---------------~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~ 63 (357)
T 2uvk_A 2 VLPETPVP---FKSGTGAIDNDTVYIGLGSA---------------GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF 63 (357)
T ss_dssp CSCCCSSC---CCSCEEEEETTEEEEECGGG---------------TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE
T ss_pred CCCCCCcc---ccceEEEEECCEEEEEeCcC---------------CCeEEEEccccCCCCeeECCCCCCCcCccceEEE
Confidence 46778876 88888888899999999973 3579999998 48999999999 8999999999
Q ss_pred eCCeEEEEcCc-C---CCCCCCceEEEEeCCCCceEeCCCCC-ccCCCceeEEEECCEEEEEecC---------------
Q 019186 158 LKEKIVVAGGF-T---SCRKSISQAEMYDPEKDVWVPIPDLH-RTHNSACTGVVIGGKVHVLHKG--------------- 217 (345)
Q Consensus 158 ~~~~iyv~gG~-~---~~~~~~~~v~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~~~iyv~gG~--------------- 217 (345)
++++||++||. . ......+++++||+.+++|+.+++++ .+ |..+++++++++||++||.
T Consensus 64 ~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 64 IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMG-MAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp ETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSC-CSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcc-cccceEEEECCEEEEEeCcCCCcCcccccchhhc
Confidence 99999999998 2 22345789999999999999999988 77 8888888899999999992
Q ss_pred ------------------------cceEEEEECCCCCeeeccCCCC----CCceEEEcCeEEEEeC--------cEEEEe
Q 019186 218 ------------------------LSTVQVLDHMGLGWTVEDYGWL----QGPMAIVHDSVYLMSH--------GLIIKQ 261 (345)
Q Consensus 218 ------------------------~~~i~~yd~~~~~W~~~~~~~~----~~~~~~~~~~l~~~~~--------~~i~~~ 261 (345)
.+++++||+.+++|+.+++++. .++++..+++||++|| ..++.|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEE
Confidence 3689999999999999876653 3788889999999998 467777
Q ss_pred cC--Cc--eEEeccchhhcccceeEEEEECCeEEEEcceecCCCC----------cccccccCceeeeccCCCCCceeEc
Q 019186 262 HR--DV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRW----------NWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 262 d~--~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~----------~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
|. ++ |++++.+|.+..|..|+++.++++|||+||.+..+.. ......+.++++||++++ +|+++
T Consensus 223 d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~--~W~~~ 300 (357)
T 2uvk_A 223 DFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG--KWDKS 300 (357)
T ss_dssp ECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEE
T ss_pred EecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC--ceeeC
Confidence 64 54 9999998766667888899999999999998643210 001134568999999999 99999
Q ss_pred CCCCCcceeEEeeeee
Q 019186 328 SPMTRCRGTILGCTQL 343 (345)
Q Consensus 328 ~~~~~~r~~~~~~~~~ 343 (345)
++||.+|.. |+|+++
T Consensus 301 ~~~p~~r~~-~~~~~~ 315 (357)
T 2uvk_A 301 GELSQGRAY-GVSLPW 315 (357)
T ss_dssp EECSSCCBS-SEEEEE
T ss_pred CCCCCCccc-ceeEEe
Confidence 999999998 677654
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=277.02 Aligned_cols=248 Identities=16% Similarity=0.252 Sum_probs=210.2
Q ss_pred cchhhHHHhhHHHHHhhcChhhHHHHHhcC--CCCcEEEEEecCC----CCeEEEEeCCCCCEEeCCCCCccccccceeE
Q 019186 23 FLHPKLELVSRSWRAAIRSPELFKARQEVG--SSENLLCVCAFDP----ENLWQLYDPLRDLWITLPVLPSKIRHLAHFG 96 (345)
Q Consensus 23 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~--~~~~~l~v~gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 96 (345)
.+...+++..+.|..+.. ++..|..++ ..++.||++||.. .++++.||+.+++|++++++|.+ |..|+
T Consensus 30 ~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~ 103 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAE---LPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR---RSTLG 103 (302)
T ss_dssp CCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC---CBSCE
T ss_pred CcEEEEcCcCCcEeEccc---CCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc---ccceE
Confidence 456667778889987743 333444333 3489999999832 56899999999999999999886 89999
Q ss_pred EEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCC-CCC
Q 019186 97 VVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCR-KSI 175 (345)
Q Consensus 97 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~-~~~ 175 (345)
+++++++|||+||..... ..+++++||+.+++|+.+++++.+|..+++++++++||++||..... ...
T Consensus 104 ~~~~~~~iyv~GG~~~~~-----------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 104 AAVLNGLLYAVGGFDGST-----------GLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp EEEETTEEEEEEEECSSC-----------EEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEEC
T ss_pred EEEECCEEEEEcCCCCCc-----------cCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccc
Confidence 999999999999974322 46899999999999999999999999999999999999999987543 347
Q ss_pred ceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEec-----CcceEEEEECCCCCeeeccCCCC---CCceEEEc
Q 019186 176 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVH 247 (345)
Q Consensus 176 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG-----~~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~~ 247 (345)
++++.||+++++|+.++++|.+ +..+++++++++||++|| ..+++++||+.+++|+.++.++. .+.++.++
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 251 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTR-RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVN 251 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred cEEEEEeCCCCcEEECCCCccc-cccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEEC
Confidence 8899999999999999999999 888999999999999999 25789999999999999876665 67788899
Q ss_pred CeEEEEeC-------cEEEEecCCc--eEEec-cchhhcccceeEEEEECCeE
Q 019186 248 DSVYLMSH-------GLIIKQHRDV--RKVVA-SASEFRRRIGFAMIGMGDDI 290 (345)
Q Consensus 248 ~~l~~~~~-------~~i~~~d~~~--W~~~~-~~p~~~~r~~~~~~~~~~~l 290 (345)
++||++|| ..++.||+++ |+.++ .+| .+|..|+++.++++|
T Consensus 252 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~--~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 252 GLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMS--TGRSYAGVTVIDKRL 302 (302)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCS--SCCBSCEEEEEEC--
T ss_pred CEEEEECCcCCCcccccEEEEcCCCCeEEECCcccC--cccccceEEEecccC
Confidence 99999998 4699999987 99997 676 689999999998865
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=277.56 Aligned_cols=256 Identities=17% Similarity=0.213 Sum_probs=211.6
Q ss_pred chhhHHHhhHHHHHhhcCh-hhHHHHHhcCCCCcEEEEEecC-----C-----CCeEEEEeCCCCCEEeCCCCCcccccc
Q 019186 24 LHPKLELVSRSWRAAIRSP-ELFKARQEVGSSENLLCVCAFD-----P-----ENLWQLYDPLRDLWITLPVLPSKIRHL 92 (345)
Q Consensus 24 ~~~~~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~l~v~gg~-----~-----~~~~~~yd~~~~~W~~~~~~~~~~~~~ 92 (345)
.+..+++..++|.. ...| +.++...+....++.||++||. . .++++.||+.+++|+.++++|.+ |
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r 89 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP---R 89 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC---E
T ss_pred ceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc---h
Confidence 44556677888874 2222 1223333334569999999992 1 23489999999999999999876 8
Q ss_pred ceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCC
Q 019186 93 AHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCR 172 (345)
Q Consensus 93 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~ 172 (345)
.+|++++++++|||+||.... ......+++++||+.+++|+.++++|.+|..|++++++++||++||.....
T Consensus 90 ~~~~~~~~~~~lyv~GG~~~~--------~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 90 CLFGLGEALNSIYVVGGREIK--------DGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDR 161 (315)
T ss_dssp ESCEEEEETTEEEEECCEESS--------TTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTS
T ss_pred hceeEEEECCEEEEEeCCcCC--------CCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCC
Confidence 999999999999999996421 012257899999999999999999999999999999999999999996555
Q ss_pred CCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEec-----CcceEEEEECCCCCeeeccCCCC---CCceE
Q 019186 173 KSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMA 244 (345)
Q Consensus 173 ~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG-----~~~~i~~yd~~~~~W~~~~~~~~---~~~~~ 244 (345)
...+++++||+.+++|+.++++|.+ |..+++++++++||++|| ..+++++||+.+++|+.+++++. .++++
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTA-RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred cccceEEEEeCCCCeEEECCCCCCc-hhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 6789999999999999999999999 889999999999999999 35689999999999999987655 67888
Q ss_pred EEcCeEEEEeC----------------cEEEEecCCc--eEEeccchhhcccceeEEEEECCeEEEEcce
Q 019186 245 IVHDSVYLMSH----------------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGV 296 (345)
Q Consensus 245 ~~~~~l~~~~~----------------~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~ 296 (345)
.++++||++|| ..++.||+++ |+++. + .+|..|+++.++++||++...
T Consensus 241 ~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--~--~~r~~~~~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 241 SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL--R--EIAYAAGATFLPVRLNVLRLT 306 (315)
T ss_dssp EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE--S--CSSCCSSCEEEEEEECGGGSE
T ss_pred EECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc--c--CCcCccceEEeCCEEEEEEeh
Confidence 89999999998 2478999987 99993 3 578889999999999999764
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=273.97 Aligned_cols=248 Identities=19% Similarity=0.274 Sum_probs=211.3
Q ss_pred CcchhhHHHhhHHHHHhhcChhhHHHHHhcC--CCCcEEEEEecC---CCCeEEEEeCCCCCEEeCCCCCccccccceeE
Q 019186 22 FFLHPKLELVSRSWRAAIRSPELFKARQEVG--SSENLLCVCAFD---PENLWQLYDPLRDLWITLPVLPSKIRHLAHFG 96 (345)
Q Consensus 22 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~--~~~~~l~v~gg~---~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 96 (345)
...+..+++..++|..+.. ++..|..++ ..++.||++||. ..++++.||+.+++|+.++++|.+ |.+|+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~ 96 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP---RDSLA 96 (306)
T ss_dssp TTSEEEEETTTTEEEECCC---CSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC---CBSCE
T ss_pred CceEEEecCCCCCEecCCC---CCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc---cccee
Confidence 3456677788899987743 333444443 348999999994 367899999999999999999876 89999
Q ss_pred EEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCC--
Q 019186 97 VVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKS-- 174 (345)
Q Consensus 97 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~-- 174 (345)
+++++++|||+||..... ...+++++||+.+++|+.++++|.+|..|++++++++||++||.......
T Consensus 97 ~~~~~~~iyv~GG~~~~~----------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 97 ACAAEGKIYTSGGSEVGN----------SALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp EEEETTEEEEECCBBTTB----------SCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCE
T ss_pred EEEECCEEEEECCCCCCC----------cEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccc
Confidence 999999999999975222 25789999999999999999999999999999999999999998754332
Q ss_pred -CceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEec-----CcceEEEEECCCCCeeeccCCCC---CCceEE
Q 019186 175 -ISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAI 245 (345)
Q Consensus 175 -~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG-----~~~~i~~yd~~~~~W~~~~~~~~---~~~~~~ 245 (345)
.+++++||+++++|+.++++|.+ +..++++.++++||++|| ..+++++||+.+++|+.++..+. .+.++.
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEA-RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred ccceEEEeCCCCCeEEECCCccch-hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 78999999999999999999999 889999999999999999 35789999999999999977665 678888
Q ss_pred EcCeEEEEeC-------cEEEEecCCc--eEEeccchhhcccceeEEEEECC
Q 019186 246 VHDSVYLMSH-------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGD 288 (345)
Q Consensus 246 ~~~~l~~~~~-------~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~ 288 (345)
++++||++|| ..++.||+++ |+.++.+| .+|..|+++.+.+
T Consensus 246 ~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~--~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 246 VGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR--AFPVTSCLICVVD 295 (306)
T ss_dssp ETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE--CCSCTTCEEEEEE
T ss_pred ECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc--cccceeEEEEECC
Confidence 9999999998 7899999987 99999888 6788888877644
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-37 Score=276.57 Aligned_cols=254 Identities=17% Similarity=0.223 Sum_probs=210.5
Q ss_pred hhhHHHhhHHHHHhhcChhhHHHHHhcCCCCcEEEEEecCC----------CCeEEEEeCCCCCEEeCCCCCccccccce
Q 019186 25 HPKLELVSRSWRAAIRSPELFKARQEVGSSENLLCVCAFDP----------ENLWQLYDPLRDLWITLPVLPSKIRHLAH 94 (345)
Q Consensus 25 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~l~v~gg~~----------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~ 94 (345)
...+++..++|.......+.++...+....++.||++||.. .+.++.||+.+++|++++++|.+ |..
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~ 102 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA---RCL 102 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC---BCS
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc---ccc
Confidence 45566778888763111112233333445689999999931 22489999999999999999886 889
Q ss_pred eEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCC
Q 019186 95 FGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKS 174 (345)
Q Consensus 95 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~ 174 (345)
|++++++++|||+||.... .....+++++||+.+++|+.++++|.+|..|++++++++||++||.......
T Consensus 103 ~~~~~~~~~iyv~GG~~~~---------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQ---------TEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp CEEEEETTEEEEEEEEBTT---------TCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCB
T ss_pred cceEEECCEEEEEcCccCC---------CCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCc
Confidence 9999999999999997521 1125789999999999999999999999999999999999999998655566
Q ss_pred CceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEec-----CcceEEEEECCCCCeeeccCCCC---CCceEEE
Q 019186 175 ISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIV 246 (345)
Q Consensus 175 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG-----~~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~ 246 (345)
.+++++||+++++|+.++++|.+ +..+++++++++||++|| ..+++++||+.+++|+.++..+. .++++.+
T Consensus 174 ~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 252 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLAPMKTP-RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL 252 (318)
T ss_dssp CCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE
T ss_pred cceEEEEcCCCCEEEECCCCCCC-cccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE
Confidence 88999999999999999999999 888999999999999999 35789999999999999987665 6788899
Q ss_pred cCeEEEEeC----------------cEEEEecCCc--eEEeccchhhcccceeEEEEECCeEEEEcc
Q 019186 247 HDSVYLMSH----------------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGG 295 (345)
Q Consensus 247 ~~~l~~~~~----------------~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG 295 (345)
+++||++|| ..++.||+++ |+++ +| .+|..|+++.++++||++..
T Consensus 253 ~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~--~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 253 AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LK--EIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ES--CCGGGTTCEEEEEEEEGGGC
T ss_pred CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cc--cccccccceeeCCEEEEEEe
Confidence 999999987 2588999987 9999 44 57889999999999998753
No 14
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=258.47 Aligned_cols=221 Identities=23% Similarity=0.367 Sum_probs=194.0
Q ss_pred EECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceE
Q 019186 99 STAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQA 178 (345)
Q Consensus 99 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v 178 (345)
..+++||++||..... ...+++++||+.+++|+.++++|.+|..|++++.+++||++||..+. ...+++
T Consensus 12 ~~~~~i~~~GG~~~~~----------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-~~~~~~ 80 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQ----------SPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGR-SRLSSV 80 (301)
T ss_dssp -CCEEEEEECCEETTT----------EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCCE
T ss_pred cCCCEEEEEeCccCCC----------cceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCC-ccCceE
Confidence 4678999999942211 25789999999999999999999999999999999999999998743 557899
Q ss_pred EEEeCCCCc---eEeCCCCCccCCCceeEEEECCEEEEEec-----CcceEEEEECCCCCeeeccCCCC---CCceEEEc
Q 019186 179 EMYDPEKDV---WVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVH 247 (345)
Q Consensus 179 ~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~~iyv~gG-----~~~~i~~yd~~~~~W~~~~~~~~---~~~~~~~~ 247 (345)
++||+.+++ |+.++++|.+ |..++++.++++||++|| ..+++++||+.+++|+.+++.+. .++++.++
T Consensus 81 ~~~d~~~~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 159 (301)
T 2vpj_A 81 ECLDYTADEDGVWYSVAPMNVR-RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVAS 159 (301)
T ss_dssp EEEETTCCTTCCCEEECCCSSC-CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEET
T ss_pred EEEECCCCCCCeeEECCCCCCC-ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEEC
Confidence 999999999 9999999999 889999999999999999 35789999999999999876554 67888899
Q ss_pred CeEEEEeC-------cEEEEecCCc--eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccC
Q 019186 248 DSVYLMSH-------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVG 318 (345)
Q Consensus 248 ~~l~~~~~-------~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~ 318 (345)
++||++|| ..++.||+++ |++++.+| .+|..|+++.++++||++||.+.. ...+++++||++
T Consensus 160 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~ 230 (301)
T 2vpj_A 160 GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA--TKRSGAGVALLNDHIYVVGGFDGT-------AHLSSVEAYNIR 230 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS--SCCBSCEEEEETTEEEEECCBCSS-------SBCCCEEEEETT
T ss_pred CEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC--cccccceEEEECCEEEEEeCCCCC-------cccceEEEEeCC
Confidence 99999998 6799999877 99998887 688999999999999999998765 257899999999
Q ss_pred CCCCceeEcCCCCCcceeEEeeeee
Q 019186 319 AERPTWRQVSPMTRCRGTILGCTQL 343 (345)
Q Consensus 319 ~~~~~W~~v~~~~~~r~~~~~~~~~ 343 (345)
++ +|.+++++|.+|.. ++++++
T Consensus 231 ~~--~W~~~~~~p~~r~~-~~~~~~ 252 (301)
T 2vpj_A 231 TD--SWTTVTSMTTPRCY-VGATVL 252 (301)
T ss_dssp TT--EEEEECCCSSCCBS-CEEEEE
T ss_pred CC--cEEECCCCCCcccc-eeEEEE
Confidence 99 99999999999988 666654
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.2e-35 Score=288.61 Aligned_cols=292 Identities=15% Similarity=0.187 Sum_probs=220.7
Q ss_pred hhhHHHhhHHHHHhhcChhhHHHHHhcCCC--CcEEEEEecCC----------CCeEEEEeCCCCCEEeCCCCCcccccc
Q 019186 25 HPKLELVSRSWRAAIRSPELFKARQEVGSS--ENLLCVCAFDP----------ENLWQLYDPLRDLWITLPVLPSKIRHL 92 (345)
Q Consensus 25 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~----------~~~~~~yd~~~~~W~~~~~~~~~~~~~ 92 (345)
...+++..++|..+...|. ........ +++||++||.. ...+++||+.+++|+.++.++.+.. .
T Consensus 168 ~~~~dp~~~~W~~~~~~P~---~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~-~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI---VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD-M 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS---CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC-C
T ss_pred cccCCCCCCeeeeeccCCC---CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC-C
Confidence 4556677888987755543 11222222 88999999843 1368999999999999988876511 2
Q ss_pred ceeEEE-EECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCC
Q 019186 93 AHFGVV-STAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTS 170 (345)
Q Consensus 93 ~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~ 170 (345)
..++++ ..+++||++||.. ..++++||+.+++|+++++|+.+|..|+++++ +++||++||...
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~---------------~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~ 308 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGND---------------AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWS 308 (656)
T ss_dssp SSCEEEECTTSCEEEECSSS---------------TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCC
T ss_pred ccccccCCCCCCEEEeCCCC---------------CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCccc
Confidence 222344 4589999999973 23799999999999999999999999999999 999999999644
Q ss_pred CCCCCceEEEEeCCCCceEeCC-----CCCccCCCceeEEEECCEEEEEec---------CcceEEEEECCCCCeeeccC
Q 019186 171 CRKSISQAEMYDPEKDVWVPIP-----DLHRTHNSACTGVVIGGKVHVLHK---------GLSTVQVLDHMGLGWTVEDY 236 (345)
Q Consensus 171 ~~~~~~~v~~yd~~~~~W~~~~-----~~~~~~~~~~~~~~~~~~iyv~gG---------~~~~i~~yd~~~~~W~~~~~ 236 (345)
.....+++++||+++++|+.++ +++.. +. .+++..++++|++|| ....++.||+.++.|.....
T Consensus 309 ~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~-~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~ 386 (656)
T 1k3i_A 309 GGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA-DK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 386 (656)
T ss_dssp SSSCCCCEEEEETTTTEEEEETTSCSGGGCCC-CT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred CCcccccceEeCCCCCcceeCCCccccccccc-cc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC
Confidence 4456789999999999999874 34444 33 245567899999997 35678999999999875322
Q ss_pred CC---------CCCceEE----EcCeEEEEeCc-------------EEEEecCCc--eEEec--cchhhcccceeEEEEE
Q 019186 237 GW---------LQGPMAI----VHDSVYLMSHG-------------LIIKQHRDV--RKVVA--SASEFRRRIGFAMIGM 286 (345)
Q Consensus 237 ~~---------~~~~~~~----~~~~l~~~~~~-------------~i~~~d~~~--W~~~~--~~p~~~~r~~~~~~~~ 286 (345)
.+ .....++ .+++||++||. .+..||+++ |+++. .+| .+|..|+++.+
T Consensus 387 ~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp--~~R~~~~~~~l 464 (656)
T 1k3i_A 387 KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY--FARTFHTSVVL 464 (656)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS--SCCBSCEEEEC
T ss_pred ccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC--CCcccCCeEEC
Confidence 11 1123333 48999999981 788999987 99986 666 68988998888
Q ss_pred -CCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCCCcceeEEeeeee
Q 019186 287 -GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 343 (345)
Q Consensus 287 -~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~~r~~~~~~~~~ 343 (345)
+++|||+||.+...... +.....++++||+.++ +|.+++++|.+|.. |++|++
T Consensus 465 ~~g~i~v~GG~~~~~~~~-~~~~~~~v~~ydp~t~--~W~~~~~~~~~R~~-hs~a~l 518 (656)
T 1k3i_A 465 PDGSTFITGGQRRGIPFE-DSTPVFTPEIYVPEQD--TFYKQNPNSIVRVY-HSISLL 518 (656)
T ss_dssp TTSCEEEECCBSBCCTTC-CCSBCCCCEEEEGGGT--EEEECCCCSSCCCT-TEEEEE
T ss_pred CCCCEEEECCcccCcCcC-CCCcccceEEEcCCCC--ceeecCCCCCcccc-ccHhhc
Confidence 99999999975321100 1246789999999999 99999999999998 677665
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=9.2e-33 Score=268.87 Aligned_cols=243 Identities=14% Similarity=0.148 Sum_probs=196.5
Q ss_pred CCcEEEEEecC---CCCeEEEEeCCCCCEEeCC-C-----CCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCC
Q 019186 54 SENLLCVCAFD---PENLWQLYDPLRDLWITLP-V-----LPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQD 122 (345)
Q Consensus 54 ~~~~l~v~gg~---~~~~~~~yd~~~~~W~~~~-~-----~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 122 (345)
.++.||++||. ..+++++||+.+++|+.++ + +|.+ |.+|+++++ +++|||+||......
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~---R~~hs~~~~~~~~~lyv~GG~~~~~~------- 465 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVA---RMCHTFTTISRNNQLLLIGGRKAPHQ------- 465 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCC---CBSCEEEEETTTTEEEEECCBSSTTC-------
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcc---ccceEEEEEccCCEEEEEcCCCCCCC-------
Confidence 58899999994 4678999999999999998 6 4444 899999999 999999999854321
Q ss_pred CCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCC---CCccC
Q 019186 123 GSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPD---LHRTH 198 (345)
Q Consensus 123 ~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~---~~~~~ 198 (345)
..+++++||+.+++|+.++++|.+|..|+++++ +++||++||..... ++++||+.+++|+.+++ +|.+
T Consensus 466 ---~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~- 537 (695)
T 2zwa_A 466 ---GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQN- 537 (695)
T ss_dssp ---BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGS-
T ss_pred ---ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCc-
Confidence 578999999999999999999999999999997 99999999987543 89999999999999986 7888
Q ss_pred CCceeEEEEC---CEEEEEecC-------cceEEEEECCCCC------eeeccCCC----CCCceEEEc-CeEEEEeC--
Q 019186 199 NSACTGVVIG---GKVHVLHKG-------LSTVQVLDHMGLG------WTVEDYGW----LQGPMAIVH-DSVYLMSH-- 255 (345)
Q Consensus 199 ~~~~~~~~~~---~~iyv~gG~-------~~~i~~yd~~~~~------W~~~~~~~----~~~~~~~~~-~~l~~~~~-- 255 (345)
+..+++++++ ++||++||. .+++++||+.+++ |+.+...+ ..++++.++ ++||++||
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 8888877777 899999992 5789999999999 88875532 267888889 99999998
Q ss_pred --------cEEEEecCCc--eEEeccchhh------cccceeEEEEECC-eEEEEcceecC-CCCcccccccCceeeecc
Q 019186 256 --------GLIIKQHRDV--RKVVASASEF------RRRIGFAMIGMGD-DIYVIGGVIGP-DRWNWDIKPMSDVDVLTV 317 (345)
Q Consensus 256 --------~~i~~~d~~~--W~~~~~~p~~------~~r~~~~~~~~~~-~l~i~GG~~~~-~~~~~~~~~~~~v~~yd~ 317 (345)
..++.||+++ |+.+. +|.. ..+.+|+++.+++ +|||+||...- +.. ...+++|.+|+
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfG----t~~n~i~~ldl 692 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFG----SVTNVGLKLIA 692 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSC----EEECCCEEEEE
T ss_pred CCCCCCCCCeEEEEECCCCeEEEee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCcc----ccccceEEEEE
Confidence 4699999987 99653 3321 2456788887766 99999996421 100 24568888887
Q ss_pred CC
Q 019186 318 GA 319 (345)
Q Consensus 318 ~~ 319 (345)
.+
T Consensus 693 ~~ 694 (695)
T 2zwa_A 693 IA 694 (695)
T ss_dssp CC
T ss_pred Ec
Confidence 64
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=1.4e-30 Score=253.49 Aligned_cols=215 Identities=13% Similarity=0.133 Sum_probs=178.7
Q ss_pred cceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC-C-----CCCCceeeeeeEe--CCeEE
Q 019186 92 LAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA-S-----MLVPRAMFACCAL--KEKIV 163 (345)
Q Consensus 92 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~-~-----~~~~r~~~~~~~~--~~~iy 163 (345)
|.+++ ++.+++|||+||... ...+++++||+.+++|+.++ + +|.+|..|+++++ +++||
T Consensus 389 r~g~~-~~~~~~iyv~GG~~~------------~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly 455 (695)
T 2zwa_A 389 KFGDV-DVAGNDVFYMGGSNP------------YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL 455 (695)
T ss_dssp BSCEE-EECSSCEEEECCBSS------------SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE
T ss_pred ceeEE-EEECCEEEEECCCCC------------CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEE
Confidence 55544 448999999999743 25789999999999999887 5 7899999999999 99999
Q ss_pred EEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-CCEEEEEecC--cceEEEEECCCCCeeeccC---C
Q 019186 164 VAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GGKVHVLHKG--LSTVQVLDHMGLGWTVEDY---G 237 (345)
Q Consensus 164 v~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~gG~--~~~i~~yd~~~~~W~~~~~---~ 237 (345)
++||.......++++++||+.+++|+.++++|.+ |..++++++ +++||++||. ..++++||+.+++|+.++. .
T Consensus 456 v~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~ 534 (695)
T 2zwa_A 456 LIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEF 534 (695)
T ss_dssp EECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGG
T ss_pred EEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCC
Confidence 9999986555688999999999999999999999 888998886 9999999992 2289999999999999875 2
Q ss_pred CC---CCceEEEc---CeEEEEeC---------cEEEEecCCc--------eEEeccchhhcccceeEEEEEC-CeEEEE
Q 019186 238 WL---QGPMAIVH---DSVYLMSH---------GLIIKQHRDV--------RKVVASASEFRRRIGFAMIGMG-DDIYVI 293 (345)
Q Consensus 238 ~~---~~~~~~~~---~~l~~~~~---------~~i~~~d~~~--------W~~~~~~p~~~~r~~~~~~~~~-~~l~i~ 293 (345)
+. .+++++++ ++||++|| ..++.||+++ |+++..+| +.+|.+|+++.++ ++|||+
T Consensus 535 p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p-~~~R~~~~~~~~~~~~iyv~ 613 (695)
T 2zwa_A 535 FQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP-LFQRYGSQIKYITPRKLLIV 613 (695)
T ss_dssp GGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG-GGCCBSCEEEEEETTEEEEE
T ss_pred CCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC-CCCcccceEEEeCCCEEEEE
Confidence 22 56656667 89999998 4688888754 68887754 4689999999999 999999
Q ss_pred cceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 294 GGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 294 GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
||.+.... ....+++++||+.++ +|..+
T Consensus 614 GG~~~~~~----~~~~~~v~~yd~~t~--~W~~~ 641 (695)
T 2zwa_A 614 GGTSPSGL----FDRTNSIISLDPLSE--TLTSI 641 (695)
T ss_dssp CCBCSSCC----CCTTTSEEEEETTTT--EEEEC
T ss_pred CCccCCCC----CCCCCeEEEEECCCC--eEEEe
Confidence 99865431 025789999999999 99965
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=2.6e-29 Score=244.11 Aligned_cols=253 Identities=15% Similarity=0.148 Sum_probs=186.4
Q ss_pred eEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC
Q 019186 68 LWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS 145 (345)
Q Consensus 68 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 145 (345)
++..|||.+++|+.++++|. ..+++++. +++||++||...... .........+++||+.+++|+.++.
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~-----~~~~~av~~~~g~l~v~GG~~~~~~-----~~~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPI-----VPAAAAIEPTSGRVLMWSSYRNDAF-----GGSPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSS-----CCSEEEEETTTTEEEEEEECCCTTT-----CSCCCSEEEEEEECTTTCCBCCCEE
T ss_pred ccccCCCCCCeeeeeccCCC-----CceeEEEEecCCEEEEEeccccccc-----ccCCCCeEEEEEEeCCCCcEEeCcc
Confidence 46679999999999988774 33344455 899999999753210 0011234579999999999999998
Q ss_pred CCCCceeee--ee-EeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-CCEEEEEec-----
Q 019186 146 MLVPRAMFA--CC-ALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GGKVHVLHK----- 216 (345)
Q Consensus 146 ~~~~r~~~~--~~-~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~gG----- 216 (345)
++.+|..++ ++ ..+++||++||.... ++++||+.+++|+.+++|+.+ |..++++++ +++||++||
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~~~dg~iyv~GG~~~~~ 310 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGG 310 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSS
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCcc-ccccceEEecCCeEEEEeCcccCC
Confidence 888776654 33 358999999997642 699999999999999999999 888888888 999999999
Q ss_pred -CcceEEEEECCCCCeeeccC-----CCC--CCceEEEcCeEEEEeC-----------cEEEEecCCc--eEEe-ccchh
Q 019186 217 -GLSTVQVLDHMGLGWTVEDY-----GWL--QGPMAIVHDSVYLMSH-----------GLIIKQHRDV--RKVV-ASASE 274 (345)
Q Consensus 217 -~~~~i~~yd~~~~~W~~~~~-----~~~--~~~~~~~~~~l~~~~~-----------~~i~~~d~~~--W~~~-~~~p~ 274 (345)
..+++++||+.+++|+.++. ++. ...++..++++|++++ ..+..||+++ |... ...+.
T Consensus 311 ~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~ 390 (656)
T 1k3i_A 311 VFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 390 (656)
T ss_dssp SCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE
T ss_pred cccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc
Confidence 34789999999999999742 222 2344557899999986 5678899887 5543 22221
Q ss_pred ----hcccceeEEEE---ECCeEEEEcceecCCCCcccccccC---ceeeeccCCCCCceeEcC--CCCCcceeEEeeee
Q 019186 275 ----FRRRIGFAMIG---MGDDIYVIGGVIGPDRWNWDIKPMS---DVDVLTVGAERPTWRQVS--PMTRCRGTILGCTQ 342 (345)
Q Consensus 275 ----~~~r~~~~~~~---~~~~l~i~GG~~~~~~~~~~~~~~~---~v~~yd~~~~~~~W~~v~--~~~~~r~~~~~~~~ 342 (345)
...+..++++. .+++||++||.+.... . ..++ ++++||+.++ +|.++. +||.+|.. +++++
T Consensus 391 ~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~-~---~~~~~~~~v~~yd~~~~--~W~~~~~~~mp~~R~~-~~~~~ 463 (656)
T 1k3i_A 391 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD-S---DATTNAHIITLGEPGTS--PNTVFASNGLYFARTF-HTSVV 463 (656)
T ss_dssp TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS-S---BCCCCEEEEECCSTTSC--CEEEECTTCCSSCCBS-CEEEE
T ss_pred ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC-C---CcCCcceEEEcCCCCCC--CeeEEccCCCCCCccc-CCeEE
Confidence 01233344443 5899999999753211 0 2334 7899999999 999987 99999987 56555
Q ss_pred e
Q 019186 343 L 343 (345)
Q Consensus 343 ~ 343 (345)
+
T Consensus 464 l 464 (656)
T 1k3i_A 464 L 464 (656)
T ss_dssp C
T ss_pred C
Confidence 4
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.99 E-value=1.4e-07 Score=86.67 Aligned_cols=271 Identities=14% Similarity=0.124 Sum_probs=149.5
Q ss_pred cCCCCChHHHHHHhhccCCCcchhhHHHhhHHHHHhhcChhhHHHHHh--------------------------------
Q 019186 3 ELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSPELFKARQE-------------------------------- 50 (345)
Q Consensus 3 ~~~~~lp~~~~~~~l~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~-------------------------------- 50 (345)
.++..||+|+++.||++++..++.++..||++|+.+..++.+-+....
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~ 96 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQ 96 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhh
Confidence 467889999999999999999999999999999988776533322110
Q ss_pred --------c----------CCCCcE---------EEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCE
Q 019186 51 --------V----------GSSENL---------LCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGK 103 (345)
Q Consensus 51 --------~----------~~~~~~---------l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 103 (345)
. +..+.. +++.| .....+.+||..+++-.. .+... ...-.+++. ++.
T Consensus 97 ~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg-~~dg~i~vwd~~~~~~~~--~~~~h--~~~v~~~~~-~~~ 170 (445)
T 2ovr_B 97 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSG-SDDNTLKVWSAVTGKCLR--TLVGH--TGGVWSSQM-RDN 170 (445)
T ss_dssp HHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEE-ETTSCEEEEETTTCCEEE--ECCCC--SSCEEEEEE-ETT
T ss_pred hhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEE-ECCCcEEEEECCCCcEEE--EEcCC--CCCEEEEEe-cCC
Confidence 0 001111 11112 224577888887765332 22221 012223333 355
Q ss_pred EEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeC
Q 019186 104 LFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDP 183 (345)
Q Consensus 104 lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~ 183 (345)
+++.|+. ...+.+||..+++-... +............++..++.|+.+ ..+.+||.
T Consensus 171 ~l~s~~~----------------dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d------g~i~~wd~ 226 (445)
T 2ovr_B 171 IIISGST----------------DRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD------ATLRVWDI 226 (445)
T ss_dssp EEEEEET----------------TSCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT------SEEEEEES
T ss_pred EEEEEeC----------------CCeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC------CEEEEEEC
Confidence 6666654 24688899887653221 111111222233345555666544 35899998
Q ss_pred CCCceEeCCCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCeee-ccCCCCCCceEEEcCeEEEEeC--cEEEE
Q 019186 184 EKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQGPMAIVHDSVYLMSH--GLIIK 260 (345)
Q Consensus 184 ~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~l~~~~~--~~i~~ 260 (345)
.+.+-... +... ......+..++..++.|+....+..||+.+.+-.. +............++..++.++ +.+..
T Consensus 227 ~~~~~~~~--~~~~-~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i 303 (445)
T 2ovr_B 227 ETGQCLHV--LMGH-VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRV 303 (445)
T ss_dssp SSCCEEEE--EECC-SSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEE
T ss_pred CCCcEEEE--EcCC-cccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEE
Confidence 87653221 1111 22233444577777777777889999987764322 2111112222334666655554 78888
Q ss_pred ecCCceEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 261 QHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 261 ~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+|..+.+.+..+.. ..........++..++.|+.++ .|.+||+.+.
T Consensus 304 ~d~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg------------~i~vwd~~~~ 349 (445)
T 2ovr_B 304 WDVETGNCIHTLTG--HQSLTSGMELKDNILVSGNADS------------TVKIWDIKTG 349 (445)
T ss_dssp EETTTCCEEEEECC--CCSCEEEEEEETTEEEEEETTS------------CEEEEETTTC
T ss_pred EECCCCCEEEEEcC--CcccEEEEEEeCCEEEEEeCCC------------eEEEEECCCC
Confidence 88877444433321 1111222334566667666332 5788888765
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.98 E-value=3.3e-08 Score=90.68 Aligned_cols=271 Identities=14% Similarity=0.119 Sum_probs=148.4
Q ss_pred CCCCChHH----HHHHhhccCCCcchhhHHHhhHHHHHhhcChhhHHH--------------------------------
Q 019186 4 LIEGLPDA----VALRCLARVPFFLHPKLELVSRSWRAAIRSPELFKA-------------------------------- 47 (345)
Q Consensus 4 ~~~~lp~~----~~~~~l~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~-------------------------------- 47 (345)
++..||+| +++.||+.|+..++.++..||++|+.+..++.+-+.
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 89 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPD 89 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC------
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCC
Confidence 34579999 999999999999999999999999977654321110
Q ss_pred -----------------------HH--hcCC-----------C---------CcEEEEEecCCCCeEEEEeCCCCCEEeC
Q 019186 48 -----------------------RQ--EVGS-----------S---------ENLLCVCAFDPENLWQLYDPLRDLWITL 82 (345)
Q Consensus 48 -----------------------~~--~~~~-----------~---------~~~l~v~gg~~~~~~~~yd~~~~~W~~~ 82 (345)
.. ..+. . ++..++.|+ ....+.+||..+.+-...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~-~dg~i~iwd~~~~~~~~~ 168 (435)
T 1p22_A 90 GNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGL-RDNTIKIWDKNTLECKRI 168 (435)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEE-SSSCEEEEESSSCCEEEE
T ss_pred CCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEe-CCCeEEEEeCCCCeEEEE
Confidence 00 0000 0 111222332 345788899877654332
Q ss_pred CCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeE
Q 019186 83 PVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKI 162 (345)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~i 162 (345)
+... .........++.+++.|+. ...+.+||..+++-... +............++..
T Consensus 169 --~~~h---~~~v~~l~~~~~~l~sg~~----------------dg~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~ 225 (435)
T 1p22_A 169 --LTGH---TGSVLCLQYDERVIITGSS----------------DSTVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGM 225 (435)
T ss_dssp --ECCC---SSCEEEEECCSSEEEEEET----------------TSCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTE
T ss_pred --EcCC---CCcEEEEEECCCEEEEEcC----------------CCeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCE
Confidence 1111 1222233347777777765 24688899887753221 11111222233334556
Q ss_pred EEEcCcCCCCCCCceEEEEeCCCCceEeC-CCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCeeec-cCCCCC
Q 019186 163 VVAGGFTSCRKSISQAEMYDPEKDVWVPI-PDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQ 240 (345)
Q Consensus 163 yv~gG~~~~~~~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~~ 240 (345)
++.|+.++ .+.+||..+..-... ..+... ......+..++..++.|+....+..||..+.+-... ......
T Consensus 226 l~s~s~dg------~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 298 (435)
T 1p22_A 226 MVTCSKDR------SIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 298 (435)
T ss_dssp EEEEETTS------CEEEEECSSSSCCEEEEEECCC-SSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEeeCCC------cEEEEeCCCCCCceeeeEecCC-CCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc
Confidence 66666543 488999877542211 111111 222333444666666776778899999987754322 111112
Q ss_pred CceEEEcCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccC
Q 019186 241 GPMAIVHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVG 318 (345)
Q Consensus 241 ~~~~~~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~ 318 (345)
......++.+++.++ +.+..+|..+.+.+..+.. ....-....+++..++.|+.++ .|.+||+.
T Consensus 299 v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~l~sg~~dg------------~i~vwd~~ 364 (435)
T 1p22_A 299 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG--HEELVRCIRFDNKRIVSGAYDG------------KIKVWDLV 364 (435)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEECCSSEEEEEETTS------------CEEEEEHH
T ss_pred EEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeC--CcCcEEEEEecCCEEEEEeCCC------------cEEEEECC
Confidence 223334555555554 7888888877444433321 1111222344777777777443 46677764
Q ss_pred C
Q 019186 319 A 319 (345)
Q Consensus 319 ~ 319 (345)
+
T Consensus 365 ~ 365 (435)
T 1p22_A 365 A 365 (435)
T ss_dssp H
T ss_pred C
Confidence 4
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.88 E-value=1.8e-07 Score=86.24 Aligned_cols=273 Identities=14% Similarity=0.122 Sum_probs=142.4
Q ss_pred CCCCChHHHHHHhhccCCCcchhhHHHhhHHHHHhhcC-hhhHHHHH---------------------------------
Q 019186 4 LIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRS-PELFKARQ--------------------------------- 49 (345)
Q Consensus 4 ~~~~lp~~~~~~~l~~~p~~~~~~~~~~~~~w~~~~~~-~~~~~~~~--------------------------------- 49 (345)
+|..||+|++++||+.|+..++.++..||++|+.+..+ +.+-+...
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPKLSQQDRLRL 93 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTTSCCTTTHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccccccccchhhhhhhhhccCCCcccchhhHH
Confidence 45679999999999999999999999999999998887 53221110
Q ss_pred ------------hc-----------CCCCcEE---------EEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEE
Q 019186 50 ------------EV-----------GSSENLL---------CVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGV 97 (345)
Q Consensus 50 ------------~~-----------~~~~~~l---------~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 97 (345)
.. +..+..+ ++.| .....+.+||..+++-.. .+... ...-.++
T Consensus 94 ~~~~~~~~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~~~~~l~sg-s~dg~i~vwd~~~~~~~~--~~~~h--~~~V~~l 168 (464)
T 3v7d_B 94 SFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITG-ADDKMIRVYDSINKKFLL--QLSGH--DGGVWAL 168 (464)
T ss_dssp HHHHHHHHHHHHHCTTCCCEEEEEECCSSSCEEEEEEETTEEEEE-ETTSCEEEEETTTTEEEE--EECCC--SSCEEEE
T ss_pred HHHHhhhhHhhhcCCCcCcceEEEcCCCCCcEEEEEECCCEEEEE-cCCCcEEEEECCCCcEEE--EEeCC--CcCEEEE
Confidence 00 0111111 1111 224567888887764222 12211 1222334
Q ss_pred EEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccC-CCCCCCceeeeeeEe---CCeEEEEcCcCCCCC
Q 019186 98 VSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPR-ASMLVPRAMFACCAL---KEKIVVAGGFTSCRK 173 (345)
Q Consensus 98 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~---~~~iyv~gG~~~~~~ 173 (345)
+..++.+++.|+. ...+.+||..+++-... ...... -.++... ++..++.|+.++
T Consensus 169 ~~~~~~~l~s~s~----------------dg~i~vwd~~~~~~~~~~~~h~~~--v~~l~~~~~~~~~~l~s~s~d~--- 227 (464)
T 3v7d_B 169 KYAHGGILVSGST----------------DRTVRVWDIKKGCCTHVFEGHNST--VRCLDIVEYKNIKYIVTGSRDN--- 227 (464)
T ss_dssp EECSTTEEEEEET----------------TSCEEEEETTTTEEEEEECCCSSC--EEEEEEEESSSCEEEEEEETTS---
T ss_pred EEcCCCEEEEEeC----------------CCCEEEEECCCCcEEEEECCCCCc--cEEEEEecCCCCCEEEEEcCCC---
Confidence 4444446666654 24688899987753221 111111 1222222 456666666543
Q ss_pred CCceEEEEeCCCCceEeCC---------------------CCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCee
Q 019186 174 SISQAEMYDPEKDVWVPIP---------------------DLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWT 232 (345)
Q Consensus 174 ~~~~v~~yd~~~~~W~~~~---------------------~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~ 232 (345)
.+.+||..+..-.... .+... ......+..++.+++.|+....+..||..+.+-.
T Consensus 228 ---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~ 303 (464)
T 3v7d_B 228 ---TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH-MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCL 303 (464)
T ss_dssp ---CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC-SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE
T ss_pred ---cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc-cceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 3788887765421100 00111 1122223445556666667778999999876543
Q ss_pred ec-cCCCC-CCceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEEEECCeEEEEcceecCCCCccccc
Q 019186 233 VE-DYGWL-QGPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIK 307 (345)
Q Consensus 233 ~~-~~~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~ 307 (345)
.. ..... ...++. .++..++.++ +.+..+|..+.+.+..+.. ....-....+.+..++.|+.++
T Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~l~s~s~dg--------- 372 (464)
T 3v7d_B 304 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG--HTALVGLLRLSDKFLVSAAADG--------- 372 (464)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECSSEEEEEETTS---------
T ss_pred EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC--CCCcEEEEEEcCCEEEEEeCCC---------
Confidence 22 11111 111222 2444444444 7788888876444433321 1112223344566666666432
Q ss_pred ccCceeeeccCCC
Q 019186 308 PMSDVDVLTVGAE 320 (345)
Q Consensus 308 ~~~~v~~yd~~~~ 320 (345)
.+.+||+.+.
T Consensus 373 ---~v~vwd~~~~ 382 (464)
T 3v7d_B 373 ---SIRGWDANDY 382 (464)
T ss_dssp ---EEEEEETTTC
T ss_pred ---cEEEEECCCC
Confidence 4566666554
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.55 E-value=3.3e-05 Score=67.92 Aligned_cols=214 Identities=14% Similarity=0.016 Sum_probs=128.1
Q ss_pred CCeEEEEeCCCCCEEeCCCC---CccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCc-c
Q 019186 66 ENLWQLYDPLRDLWITLPVL---PSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQW-S 141 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~---~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W-~ 141 (345)
..++..+|+.+++...--.. ..+ ....-..++..++++|+.... ...+.++|+.+.+- .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~-lg~~~~~i~~~~~~lyv~~~~----------------~~~v~viD~~t~~~~~ 78 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFK-LGDVAQSMVIRDGIGWIVVNN----------------SHVIFAIDINTFKEVG 78 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSC-CBSCEEEEEEETTEEEEEEGG----------------GTEEEEEETTTCCEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcc-cCccceEEEEECCEEEEEEcC----------------CCEEEEEECcccEEEE
Confidence 57899999999987542100 111 112334566789999999753 45799999998875 2
Q ss_pred cCCCCCCCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEe-C--CCCCccCCCceeEEEECCEEEEEec-
Q 019186 142 PRASMLVPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVP-I--PDLHRTHNSACTGVVIGGKVHVLHK- 216 (345)
Q Consensus 142 ~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~-~--~~~~~~~~~~~~~~~~~~~iyv~gG- 216 (345)
.++... .-..+++ -++++|+.... ...+.++|+++.+-.. + +...........++..++++|+..-
T Consensus 79 ~i~~~~---~p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~ 149 (328)
T 3dsm_A 79 RITGFT---SPRYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS 149 (328)
T ss_dssp EEECCS---SEEEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT
T ss_pred EcCCCC---CCcEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC
Confidence 343222 2234444 57899998642 2569999999886432 2 2211000022234447899999863
Q ss_pred CcceEEEEECCCCCeee-ccCCCCCCceEE-EcCeEEEEeC------------cEEEEecCCceEEeccchhhcccceeE
Q 019186 217 GLSTVQVLDHMGLGWTV-EDYGWLQGPMAI-VHDSVYLMSH------------GLIIKQHRDVRKVVASASEFRRRIGFA 282 (345)
Q Consensus 217 ~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~-~~~~l~~~~~------------~~i~~~d~~~W~~~~~~p~~~~r~~~~ 282 (345)
..+.+..+|+++++... +.....+..++. .+|++|+... ..++.+|+++-+.+..+..+......+
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~ 229 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSE 229 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEE
T ss_pred CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCcee
Confidence 46789999999887543 222222233333 4688888865 369999998733332222111222344
Q ss_pred EEEE--CCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 283 MIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 283 ~~~~--~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
++.- ++.+|+..+ .|+++|++++
T Consensus 230 la~~~d~~~lyv~~~---------------~v~~~d~~t~ 254 (328)
T 3dsm_A 230 VQLNGTRDTLYWINN---------------DIWRMPVEAD 254 (328)
T ss_dssp EEECTTSCEEEEESS---------------SEEEEETTCS
T ss_pred EEEecCCCEEEEEcc---------------EEEEEECCCC
Confidence 5544 566777532 5778888776
No 23
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.49 E-value=2.5e-05 Score=65.03 Aligned_cols=180 Identities=12% Similarity=0.018 Sum_probs=120.0
Q ss_pred cceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCC
Q 019186 92 LAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSC 171 (345)
Q Consensus 92 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~ 171 (345)
.+..++...++.||+.+|..+ .+.+.++|+.+++-...-.++......+++..+++||+....
T Consensus 21 ~ftqGL~~~~~~LyestG~~g--------------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~--- 83 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETG--------------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR--- 83 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTT--------------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS---
T ss_pred cccccEEEECCEEEEECCCCC--------------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee---
Confidence 455678888999999998642 467999999999865544555555567788889999999653
Q ss_pred CCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCeee-c--cCCCC----CCceE
Q 019186 172 RKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV-E--DYGWL----QGPMA 244 (345)
Q Consensus 172 ~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~-~--~~~~~----~~~~~ 244 (345)
.+.+.+||+++.+-. ..++.+ ..+.+.+..+++||+.-| .+.+..+|+.+.+-.. + ..... ..-+.
T Consensus 84 ---~~~v~v~D~~tl~~~--~ti~~~-~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 84 ---NHEGFVYDLATLTPR--ARFRYP-GEGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp ---SSEEEEEETTTTEEE--EEEECS-SCCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred ---CCEEEEEECCcCcEE--EEEeCC-CCceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeE
Confidence 356999999886533 222223 234555566778999986 7889999999875422 1 11111 11344
Q ss_pred EEcCeEEEEeC--cEEEEecCCc-----eEEeccchhhc-------ccceeEEEEE--CCeEEEEcc
Q 019186 245 IVHDSVYLMSH--GLIIKQHRDV-----RKVVASASEFR-------RRIGFAMIGM--GDDIYVIGG 295 (345)
Q Consensus 245 ~~~~~l~~~~~--~~i~~~d~~~-----W~~~~~~p~~~-------~r~~~~~~~~--~~~l~i~GG 295 (345)
..+|+||+-.. +.|...|+++ |..+..+.... .-...+++.. ++++||.|-
T Consensus 157 ~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 157 WVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 56999997775 8999999987 55554432111 1133555554 467887765
No 24
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.40 E-value=0.00037 Score=62.13 Aligned_cols=224 Identities=13% Similarity=0.150 Sum_probs=135.4
Q ss_pred CCcEEEEEecCCCCeEEEEeCCCCC--EEeCCCCCcc----ccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCc
Q 019186 54 SENLLCVCAFDPENLWQLYDPLRDL--WITLPVLPSK----IRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFAT 127 (345)
Q Consensus 54 ~~~~l~v~gg~~~~~~~~yd~~~~~--W~~~~~~~~~----~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 127 (345)
.++.+|+... ...++.||+.+++ |+.-...... .........+..++.||+... .
T Consensus 52 ~~~~v~~~~~--~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-----------------~ 112 (376)
T 3q7m_A 52 ADNVVYAADR--AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-----------------K 112 (376)
T ss_dssp ETTEEEEECT--TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-----------------T
T ss_pred ECCEEEEEcC--CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-----------------C
Confidence 3778888753 4589999998774 6653321100 001223445667888998653 2
Q ss_pred CceEEEeCCCCC--cccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCc-cCCCce
Q 019186 128 NEVWSYDPVTRQ--WSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHR-THNSAC 202 (345)
Q Consensus 128 ~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~-~~~~~~ 202 (345)
..++.+|..+++ |+.-..-. .....++.++.+|+... ...+..||+++.+ |+.-...+. ..+...
T Consensus 113 g~l~a~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~ 182 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSLRGES 182 (376)
T ss_dssp SEEEEEETTTCCEEEEEECSSC---CCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----CCCC
T ss_pred CEEEEEECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceeecCCC
Confidence 468999998876 76532211 12233455788877543 2358999998775 875432211 101123
Q ss_pred eEEEECCEEEEEecCcceEEEEECCCC--CeeeccCCC-----------CCCceEEEcCeEEEEeC-cEEEEecCCc---
Q 019186 203 TGVVIGGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGW-----------LQGPMAIVHDSVYLMSH-GLIIKQHRDV--- 265 (345)
Q Consensus 203 ~~~~~~~~iyv~gG~~~~i~~yd~~~~--~W~~~~~~~-----------~~~~~~~~~~~l~~~~~-~~i~~~d~~~--- 265 (345)
+.+..++.+|+.. ....+.++|++++ .|+.....+ .....+..++.+|+.+. +.++.+|.++
T Consensus 183 ~~~~~~~~v~~g~-~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 183 APTTAFGAAVVGG-DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI 261 (376)
T ss_dssp CCEEETTEEEECC-TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE
T ss_pred CcEEECCEEEEEc-CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE
Confidence 3455688877643 4567999999866 576543221 12344567888988875 7899999865
Q ss_pred -eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 266 -RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 266 -W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
|+.-.. .....+..++.||+... . ..+.+||+++++..|+.-
T Consensus 262 ~w~~~~~-------~~~~~~~~~~~l~~~~~---~----------g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 262 MWKRELG-------SVNDFIVDGNRIYLVDQ---N----------DRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp EEEECCC-------CEEEEEEETTEEEEEET---T----------CCEEEEETTTCCEEEEEC
T ss_pred EeeccCC-------CCCCceEECCEEEEEcC---C----------CeEEEEECCCCcEEEeec
Confidence 775421 12345556888888743 1 268899998886678763
No 25
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.38 E-value=0.0002 Score=63.93 Aligned_cols=221 Identities=14% Similarity=0.099 Sum_probs=133.2
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCC--EEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDL--WITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.+|+... ...++.+|+.+++ |+.-. +.. .....+..++.||+... ...++.
T Consensus 103 ~~~v~v~~~--~g~l~a~d~~tG~~~W~~~~--~~~----~~~~p~~~~~~v~v~~~-----------------~g~l~~ 157 (376)
T 3q7m_A 103 GGHVYIGSE--KAQVYALNTSDGTVAWQTKV--AGE----ALSRPVVSDGLVLIHTS-----------------NGQLQA 157 (376)
T ss_dssp TTEEEEEET--TSEEEEEETTTCCEEEEEEC--SSC----CCSCCEEETTEEEEECT-----------------TSEEEE
T ss_pred CCEEEEEcC--CCEEEEEECCCCCEEEEEeC--CCc----eEcCCEEECCEEEEEcC-----------------CCeEEE
Confidence 677777653 4679999998875 65532 211 12223455788887653 236899
Q ss_pred EeCCCCC--cccCCCCCC--CceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCccC-------C
Q 019186 133 YDPVTRQ--WSPRASMLV--PRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHRTH-------N 199 (345)
Q Consensus 133 yd~~t~~--W~~~~~~~~--~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~-------~ 199 (345)
+|+.+++ |+.-...+. .+.....++.++.+|+. .. ...+..||+++.+ |+.-...+... .
T Consensus 158 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g-~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~ 230 (376)
T 3q7m_A 158 LNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVG-GD------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSD 230 (376)
T ss_dssp EETTTCCEEEEEECCC-----CCCCCCEEETTEEEEC-CT------TTEEEEEETTTCCEEEEEECCC-----------C
T ss_pred EECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEE-cC------CCEEEEEECCCCcEEEEEecccCCCCcccccccc
Confidence 9998876 765432221 12223445557777663 22 1358999988764 76432222110 0
Q ss_pred CceeEEEECCEEEEEecCcceEEEEECCCC--CeeeccCCCCCCceEEEcCeEEEEeC-cEEEEecCCc----eEEeccc
Q 019186 200 SACTGVVIGGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGWLQGPMAIVHDSVYLMSH-GLIIKQHRDV----RKVVASA 272 (345)
Q Consensus 200 ~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~l~~~~~-~~i~~~d~~~----W~~~~~~ 272 (345)
.....+..++.+|+.+ ....+.++|++++ .|+.... .....+..++.+|+... +.++.+|.++ |+.-. .
T Consensus 231 ~~~~p~~~~~~v~~~~-~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~-~ 306 (376)
T 3q7m_A 231 VDTTPVVVNGVVFALA-YNGNLTALDLRSGQIMWKRELG--SVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSD-L 306 (376)
T ss_dssp CCCCCEEETTEEEEEC-TTSCEEEEETTTCCEEEEECCC--CEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECT-T
T ss_pred cCCCcEEECCEEEEEe-cCcEEEEEECCCCcEEeeccCC--CCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecc-c
Confidence 1223356688998876 4567999999876 4765422 12345667889999887 6899999876 77642 1
Q ss_pred hhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 273 SEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 273 p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
+ .+.....+..++.||+... . ..++++|+++.+..|+.-
T Consensus 307 ~---~~~~~~~~~~~~~l~v~~~---~----------g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 307 L---HRLLTSPVLYNGNLVVGDS---E----------GYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp T---TSCCCCCEEETTEEEEECT---T----------SEEEEEETTTCCEEEEEE
T ss_pred C---CCcccCCEEECCEEEEEeC---C----------CeEEEEECCCCcEEEEEe
Confidence 1 2222334556888887532 1 268899998886667653
No 26
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.31 E-value=5.2e-07 Score=56.35 Aligned_cols=42 Identities=19% Similarity=0.220 Sum_probs=37.4
Q ss_pred cCCCCChHHHHHHhhccCCCcchhhHHHhhHHHHHhhcChhh
Q 019186 3 ELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSPEL 44 (345)
Q Consensus 3 ~~~~~lp~~~~~~~l~~~p~~~~~~~~~~~~~w~~~~~~~~~ 44 (345)
..|..||+|++.+|++++|..++.++..||++|+.+..++.+
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 457789999999999999999999999999999999887765
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.29 E-value=4.9e-05 Score=63.82 Aligned_cols=179 Identities=9% Similarity=-0.043 Sum_probs=116.3
Q ss_pred ceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCC
Q 019186 93 AHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCR 172 (345)
Q Consensus 93 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~ 172 (345)
+..++...++.||+..|..+ .+.+.++|+.+++-...-.++......+++..+++||+....
T Consensus 44 ftqGL~~~~~~LyestG~~g--------------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~---- 105 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG--------------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK---- 105 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT--------------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS----
T ss_pred ccceEEEECCEEEEECCCCC--------------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee----
Confidence 44567777899999998642 467999999999854433444444456678889999999653
Q ss_pred CCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCeee-ccC---CCCCC---ceEE
Q 019186 173 KSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV-EDY---GWLQG---PMAI 245 (345)
Q Consensus 173 ~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~-~~~---~~~~~---~~~~ 245 (345)
.+.+.+||+++.+-. ..++.+ ..+.+.+.-++.+|+..| .+.+..+|+.+.+=.. +.- ..... -+..
T Consensus 106 --~~~v~v~D~~t~~~~--~ti~~~-~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 106 --NGLGFVWNIRNLRQV--RSFNYD-GEGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp --SSEEEEEETTTCCEE--EEEECS-SCCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE
T ss_pred --CCEEEEEECccCcEE--EEEECC-CCceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEE
Confidence 356999999887643 222223 234455556677998886 7889999999875432 211 11111 2556
Q ss_pred EcCeEEEEeC--cEEEEecCCc-----eEEeccchhhc------ccceeEEEEE--CCeEEEEcc
Q 019186 246 VHDSVYLMSH--GLIIKQHRDV-----RKVVASASEFR------RRIGFAMIGM--GDDIYVIGG 295 (345)
Q Consensus 246 ~~~~l~~~~~--~~i~~~d~~~-----W~~~~~~p~~~------~r~~~~~~~~--~~~l~i~GG 295 (345)
.+|+||+-.. +.|...|+++ |..++.+.... .-...+++.- ++++||.|.
T Consensus 180 ~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 180 VDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 7999998775 8999999988 44444332111 1133556654 467777765
No 28
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.14 E-value=0.00029 Score=59.18 Aligned_cols=176 Identities=8% Similarity=-0.060 Sum_probs=114.5
Q ss_pred ceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCC
Q 019186 93 AHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCR 172 (345)
Q Consensus 93 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~ 172 (345)
+..++...++.||+..|.. ..+.++|+.+++-...- ++......+++..+++||+....
T Consensus 56 ftqGL~~~~~~Ly~stG~~----------------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~---- 114 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQ----------------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT---- 114 (268)
T ss_dssp CEEEEEEETTEEEEEETTT----------------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS----
T ss_pred ccceEEEECCEEEEEcCCC----------------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc----
Confidence 3457777899999999863 23889999998754433 44433446688889999999653
Q ss_pred CCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCeee-c--cCCCC----CCceEE
Q 019186 173 KSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV-E--DYGWL----QGPMAI 245 (345)
Q Consensus 173 ~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~-~--~~~~~----~~~~~~ 245 (345)
.+.+.+||+++.+-.. .++.+ ..+.+.+..++.||+..| .+.+..+|+++.+=.. + ..... ..-+..
T Consensus 115 --~~~v~V~D~~Tl~~~~--ti~~~-~eGwGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 115 --EGLLFTWSGMPPQRER--TTRYS-GEGWGLCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp --SCEEEEEETTTTEEEE--EEECS-SCCCCEEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred --CCEEEEEECCcCcEEE--EEeCC-CceeEEecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE
Confidence 3569999998876432 22222 234566677889999986 8899999999875432 1 11111 112345
Q ss_pred EcCeEEEEeC--cEEEEecCCc-----eEEeccchhhcc-------cceeEEEEE--CCeEEEEcc
Q 019186 246 VHDSVYLMSH--GLIIKQHRDV-----RKVVASASEFRR-------RIGFAMIGM--GDDIYVIGG 295 (345)
Q Consensus 246 ~~~~l~~~~~--~~i~~~d~~~-----W~~~~~~p~~~~-------r~~~~~~~~--~~~l~i~GG 295 (345)
.+|+||+-.. +.|...|+++ |..+..+..... -...+++.- ++++||.|.
T Consensus 189 ~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 189 ANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred eCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6999997764 8999999987 445443321111 123455544 467888765
No 29
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.12 E-value=0.00084 Score=58.78 Aligned_cols=183 Identities=10% Similarity=-0.050 Sum_probs=111.1
Q ss_pred cCceEEEeCCCCCcccCC-----CCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCce-EeCCCCCccCCC
Q 019186 127 TNEVWSYDPVTRQWSPRA-----SMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVW-VPIPDLHRTHNS 200 (345)
Q Consensus 127 ~~~~~~yd~~t~~W~~~~-----~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~~~~ 200 (345)
...+..+|+.+++....- ..+.......++..++++|+....+ +.+.++|+++.+- ..++....
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~------~~v~viD~~t~~~~~~i~~~~~---- 85 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNS------HVIFAIDINTFKEVGRITGFTS---- 85 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGG------TEEEEEETTTCCEEEEEECCSS----
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCC------CEEEEEECcccEEEEEcCCCCC----
Confidence 467999999998875421 1122233355667799999997532 4699999998875 33432222
Q ss_pred ceeEEE-ECCEEEEEecCcceEEEEECCCCCee-eccCCC------CCCceEEEcCeEEEEe---CcEEEEecCCceEEe
Q 019186 201 ACTGVV-IGGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGW------LQGPMAIVHDSVYLMS---HGLIIKQHRDVRKVV 269 (345)
Q Consensus 201 ~~~~~~-~~~~iyv~gG~~~~i~~yd~~~~~W~-~~~~~~------~~~~~~~~~~~l~~~~---~~~i~~~d~~~W~~~ 269 (345)
...++. .++++|+.......+.++|+.+++-. .++... .+..++..++++|+.+ ...+..+|+++-+.+
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 233344 68899998755688999999988653 222222 3455666899999996 378999999873333
Q ss_pred ccchhhcccceeEEE-EECCeEEEEcceecCCCCcccccccCceeeeccCCCCCcee
Q 019186 270 ASASEFRRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWR 325 (345)
Q Consensus 270 ~~~p~~~~r~~~~~~-~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~ 325 (345)
..++. ....+.++ .-++++|+.......... .. .....|.++|+++. +..
T Consensus 166 ~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~-~~-~~~~~v~~id~~t~--~v~ 216 (328)
T 3dsm_A 166 DELTI--GIQPTSLVMDKYNKMWTITDGGYEGSP-YG-YEAPSLYRIDAETF--TVE 216 (328)
T ss_dssp EEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCS-SC-BCCCEEEEEETTTT--EEE
T ss_pred EEEEc--CCCccceEEcCCCCEEEEECCCccCCc-cc-cCCceEEEEECCCC--eEE
Confidence 33221 11112233 336788887542211100 00 01257999999887 544
No 30
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.09 E-value=0.0003 Score=58.50 Aligned_cols=148 Identities=16% Similarity=0.084 Sum_probs=102.6
Q ss_pred CcEEEEEecCC-CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDP-ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.||+..|.. .+++..+|+.+++=..--+++.. .+..+++..+++||+.... .+.+++|
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~---~fgeGi~~~~~~ly~ltw~----------------~~~v~v~ 90 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP---YFGAGIVAWRDRLIQLTWR----------------NHEGFVY 90 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT---CCEEEEEEETTEEEEEESS----------------SSEEEEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC---cceeEEEEeCCEEEEEEee----------------CCEEEEE
Confidence 57899988854 67899999999986555455543 4566788889999999753 5689999
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceE---eCCCCCccCCCceeEEEECCE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWV---PIPDLHRTHNSACTGVVIGGK 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~---~~~~~~~~~~~~~~~~~~~~~ 210 (345)
|+.+.+- +..++.+..+.+++.-++++|+.-| .+.+..+|+++.+-. .+..-+.+...-......+++
T Consensus 91 D~~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~ 161 (243)
T 3mbr_X 91 DLATLTP--RARFRYPGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGE 161 (243)
T ss_dssp ETTTTEE--EEEEECSSCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTE
T ss_pred ECCcCcE--EEEEeCCCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCE
Confidence 9987653 2233333355677766788998865 245999999987532 222222231122334456999
Q ss_pred EEEEecCcceEEEEECCCCC
Q 019186 211 VHVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~ 230 (345)
||+---..+.|.+.|+++++
T Consensus 162 lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp EEEEETTTTEEEEECTTTCB
T ss_pred EEEEECCCCeEEEEECCCCC
Confidence 99765467899999999885
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.03 E-value=0.00048 Score=58.27 Aligned_cols=178 Identities=12% Similarity=0.001 Sum_probs=111.6
Q ss_pred eEEEEEC-CEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCC
Q 019186 95 FGVVSTA-GKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRK 173 (345)
Q Consensus 95 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~ 173 (345)
++++..+ +.||+..|.. ..+.+.++|+.+++-...-+++......+++..++++|+....
T Consensus 24 ~Gl~~~~dg~Lyvstg~~--------------~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~----- 84 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY--------------GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL----- 84 (266)
T ss_dssp EEEEECSTTEEEEEECST--------------TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----
T ss_pred ccEEEeCCCeEEEECCCC--------------CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----
Confidence 5677765 8999987742 2468999999998854432333333445677778999999643
Q ss_pred CCceEEEEeCCCCceE-eCCCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCee-ecc--CCCC----CCceEE
Q 019186 174 SISQAEMYDPEKDVWV-PIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWT-VED--YGWL----QGPMAI 245 (345)
Q Consensus 174 ~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~-~~~--~~~~----~~~~~~ 245 (345)
.+.+.+||+++.+=. +++ .+ . ..+.+.+.-++++|+..| .+.+..+|+++.+=. .+. .... ...+..
T Consensus 85 -~~~v~viD~~t~~v~~~i~-~g-~-~~g~glt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 85 -KNIGFIYDRRTLSNIKNFT-HQ-M-KDGWGLATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp -CSEEEEEETTTTEEEEEEE-CC-S-SSCCEEEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred -CCEEEEEECCCCcEEEEEE-CC-C-CCeEEEEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECCCCcccccceeEEE
Confidence 356999999876532 222 11 1 123334444567998875 789999999886532 222 1101 123445
Q ss_pred EcCeEEEEeC--cEEEEecCCceEEeccchhhc------------ccceeEEEEE--CCeEEEEcce
Q 019186 246 VHDSVYLMSH--GLIIKQHRDVRKVVASASEFR------------RRIGFAMIGM--GDDIYVIGGV 296 (345)
Q Consensus 246 ~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~------------~r~~~~~~~~--~~~l~i~GG~ 296 (345)
.++++|+-.. +.|...|+++++.++.++... .-...+++.- ++++||.|+.
T Consensus 160 ~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 160 INGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp ETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred ECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 5899998875 899999999855554443210 0122566655 4578888773
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.98 E-value=0.00047 Score=61.47 Aligned_cols=221 Identities=13% Similarity=0.052 Sum_probs=116.9
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
+.+++.++ ....+.++|..+++-...-... ..-.+++.. ++ .||+.++. ...+.+|
T Consensus 2 ~~l~vs~~-~d~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~----------------d~~i~v~ 59 (391)
T 1l0q_A 2 TFAYIANS-ESDNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAH----------------SNDVSII 59 (391)
T ss_dssp EEEEEEET-TTTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGG----------------GTEEEEE
T ss_pred CEEEEEcC-CCCEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCC----------------CCeEEEE
Confidence 35566654 3468999999887644321111 112334443 44 46677653 3478999
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-C-C
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-G-G 209 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~-~ 209 (345)
|..+++....-.... .-.+++.. +..||+.+..+ ..+.+||+.+++-...-. .. ......+.. + .
T Consensus 60 d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~--~~-~~~~~~~~s~dg~ 128 (391)
T 1l0q_A 60 DTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVK--TG-KSPLGLALSPDGK 128 (391)
T ss_dssp ETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEE--CS-SSEEEEEECTTSS
T ss_pred ECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEe--CC-CCcceEEECCCCC
Confidence 998876433222222 22233333 34566665432 459999999876543211 11 112222222 3 3
Q ss_pred EEEEEecCcceEEEEECCCCCeeeccCCCC-CCceEEE-cC-eEEEEeC--cEEEEecCCceEEeccchhhcccceeEEE
Q 019186 210 KVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QGPMAIV-HD-SVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMI 284 (345)
Q Consensus 210 ~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~~-~~-~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~ 284 (345)
.+|+.++....+..+|+.+++....-.... ...++.. ++ .+|+.+. +.+..+|..+.+.+..++. ......++
T Consensus 129 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~ 206 (391)
T 1l0q_A 129 KLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV--EAAPSGIA 206 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec--CCCccceE
Confidence 577887667889999998876544321111 1122222 34 5666655 7899999887544433331 11112222
Q ss_pred E-ECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 285 G-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 285 ~-~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
. -+++.+++++.+... ..+.+||+.+.
T Consensus 207 ~~~~g~~l~~~~~~~~~---------~~v~~~d~~~~ 234 (391)
T 1l0q_A 207 VNPEGTKAYVTNVDKYF---------NTVSMIDTGTN 234 (391)
T ss_dssp ECTTSSEEEEEEECSSC---------CEEEEEETTTT
T ss_pred ECCCCCEEEEEecCcCC---------CcEEEEECCCC
Confidence 2 245545554432111 36788888765
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.91 E-value=0.00056 Score=57.41 Aligned_cols=149 Identities=9% Similarity=-0.045 Sum_probs=99.3
Q ss_pred CcEEEEEecCC-CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDP-ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.||+..|.. .+.+..+|+.+++=..--+++.. .+..+++..+++||+.... .+.+++|
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~---~FgeGit~~g~~ly~ltw~----------------~~~v~v~ 112 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR---YFGEGISDWKDKIVGLTWK----------------NGLGFVW 112 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT---CCEEEEEEETTEEEEEESS----------------SSEEEEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc---cceeEEEEeCCEEEEEEee----------------CCEEEEE
Confidence 67899988754 56899999999975444344432 4556688889999999653 4689999
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceE-eCC--CCCccCCCceeEEEECCE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-PIP--DLHRTHNSACTGVVIGGK 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~~~--~~~~~~~~~~~~~~~~~~ 210 (345)
|+.+.+-. ..++.+-.+.+++.-++.+|+.-| .+.+..+|+++.+-. .++ .-..+...-......+++
T Consensus 113 D~~t~~~~--~ti~~~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~ 183 (262)
T 3nol_A 113 NIRNLRQV--RSFNYDGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGE 183 (262)
T ss_dssp ETTTCCEE--EEEECSSCCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTE
T ss_pred ECccCcEE--EEEECCCCceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCE
Confidence 99887632 222323345666666778888755 246999999987633 221 111220111124456999
Q ss_pred EEEEecCcceEEEEECCCCCe
Q 019186 211 VHVLHKGLSTVQVLDHMGLGW 231 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~W 231 (345)
||+---..+.|.+.|+++++=
T Consensus 184 lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp EEEEETTSSEEEEECTTTCBE
T ss_pred EEEEEccCCeEEEEECCCCcE
Confidence 997654678999999998853
No 34
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=97.90 E-value=5.7e-06 Score=70.71 Aligned_cols=49 Identities=24% Similarity=0.421 Sum_probs=43.9
Q ss_pred cCCCCChHHHHHHhhccCCCcchh-hHHHhhHHHHHhhcChhhHHHHHhc
Q 019186 3 ELIEGLPDAVALRCLARVPFFLHP-KLELVSRSWRAAIRSPELFKARQEV 51 (345)
Q Consensus 3 ~~~~~lp~~~~~~~l~~~p~~~~~-~~~~~~~~w~~~~~~~~~~~~~~~~ 51 (345)
..+..||+|++++||++||..++. ++++||++|+.++.++.|-+.+...
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhc
Confidence 467799999999999999999999 9999999999999999887766544
No 35
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.86 E-value=0.00049 Score=57.83 Aligned_cols=146 Identities=10% Similarity=0.016 Sum_probs=97.3
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
++.||+..|... .+..+|+.+++=..-- ++.. .+..+++..+++||+.... .+.+++||
T Consensus 64 ~~~Ly~stG~~g-~v~~iD~~Tgkv~~~~-l~~~---~FgeGit~~g~~Ly~ltw~----------------~~~v~V~D 122 (268)
T 3nok_A 64 QGHFFESTGHQG-TLRQLSLESAQPVWME-RLGN---IFAEGLASDGERLYQLTWT----------------EGLLFTWS 122 (268)
T ss_dssp TTEEEEEETTTT-EEEECCSSCSSCSEEE-ECTT---CCEEEEEECSSCEEEEESS----------------SCEEEEEE
T ss_pred CCEEEEEcCCCC-EEEEEECCCCcEEeEE-CCCC---cceeEEEEeCCEEEEEEcc----------------CCEEEEEE
Confidence 688998888653 3999999998643322 3322 3455688889999999653 46899999
Q ss_pred CCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceE-e--CCCCCccCCCceeEEEECCEE
Q 019186 135 PVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-P--IPDLHRTHNSACTGVVIGGKV 211 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~--~~~~~~~~~~~~~~~~~~~~i 211 (345)
+.+.+-. ..++....+.+++.-++.+|+.-| .+.+..+|+++.+-. . +..-+.+...-......+++|
T Consensus 123 ~~Tl~~~--~ti~~~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~l 193 (268)
T 3nok_A 123 GMPPQRE--RTTRYSGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVI 193 (268)
T ss_dssp TTTTEEE--EEEECSSCCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEE
T ss_pred CCcCcEE--EEEeCCCceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEE
Confidence 9876632 222223345677777888999865 246999999997643 2 222222211122344569999
Q ss_pred EEEecCcceEEEEECCCCC
Q 019186 212 HVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 212 yv~gG~~~~i~~yd~~~~~ 230 (345)
|+---..+.|.+.|+++++
T Consensus 194 yanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp EEEETTCSEEEEECTTTCB
T ss_pred EEEECCCCeEEEEeCCCCc
Confidence 9765457899999999885
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.82 E-value=0.00047 Score=61.48 Aligned_cols=219 Identities=12% Similarity=0.080 Sum_probs=116.8
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
+..+++.++. ...+.++|..+++....-... ..-.+++.. ++ .||+.+.. ...+.+
T Consensus 43 g~~l~~~~~~-d~~i~v~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~----------------~~~v~v 100 (391)
T 1l0q_A 43 GTKVYVANAH-SNDVSIIDTATNNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMA----------------SSTLSV 100 (391)
T ss_dssp SSEEEEEEGG-GTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEETT----------------TTEEEE
T ss_pred CCEEEEECCC-CCeEEEEECCCCeEEEEEECC-----CCccceEECCCCCEEEEEECC----------------CCEEEE
Confidence 5567666642 368999999888654432222 122234443 34 46666542 346999
Q ss_pred EeCCCCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--C
Q 019186 133 YDPVTRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G 208 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~ 208 (345)
||+.+++-...-.. .....+++.. ++ .+|+.++.+ ..+.+||..+.+....-..... ....+.. +
T Consensus 101 ~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~dg 169 (391)
T 1l0q_A 101 IDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVGRS---PKGIAVTPDG 169 (391)
T ss_dssp EETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECCSS---EEEEEECTTS
T ss_pred EECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecCCC---cceEEECCCC
Confidence 99988764332211 1122333333 33 566666433 3699999988765433211111 1222222 3
Q ss_pred CEEEEEecCcceEEEEECCCCCeeeccCCCC-CCceEE-EcC-eEEEEe---C-cEEEEecCCceEEeccchhhccccee
Q 019186 209 GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QGPMAI-VHD-SVYLMS---H-GLIIKQHRDVRKVVASASEFRRRIGF 281 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~-~~~-~l~~~~---~-~~i~~~d~~~W~~~~~~p~~~~r~~~ 281 (345)
..+|+.++....+..+|+.+++....-.... ...++. .++ .+++.+ . ..+..+|.++.+.+..++. .....
T Consensus 170 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~ 247 (391)
T 1l0q_A 170 TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV--GPDPA 247 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC--CSSEE
T ss_pred CEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec--CCCcc
Confidence 4677777666789999998876543321111 111222 133 566665 2 7899999887554444431 11122
Q ss_pred EEEEE-CC-eEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 282 AMIGM-GD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 282 ~~~~~-~~-~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.++.. ++ .+|+.++.+ ..+.+||+.+.
T Consensus 248 ~~~~s~dg~~l~~s~~~d------------~~v~v~d~~~~ 276 (391)
T 1l0q_A 248 GIAVTPDGKKVYVALSFX------------NTVSVIDTATN 276 (391)
T ss_dssp EEEECTTSSEEEEEETTT------------TEEEEEETTTT
T ss_pred EEEEccCCCEEEEEcCCC------------CEEEEEECCCC
Confidence 33322 34 465665422 25788888765
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.80 E-value=0.0085 Score=50.13 Aligned_cols=222 Identities=14% Similarity=0.002 Sum_probs=117.1
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+.+......+..||+.+........... ..-.+++.. ++.+|+... ...+++|
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~-----------------~~~i~~~ 92 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAGTVYVTDF-----------------NNRVVTL 92 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC-----EECCCCSC----CSCCCEEECTTCCEEEEET-----------------TTEEEEE
T ss_pred CCCEEEEccCCCCcEEEecCCCcccceEeeCCc----CCcceeEECCCCCEEEEcC-----------------CCEEEEE
Confidence 456887332335678899987776554432211 112234444 567888764 1368899
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-CCEE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GGKV 211 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~i 211 (345)
|+.++.......... ..-.++++. ++++|+..... ..+.+||..+........... .....++.. ++++
T Consensus 93 d~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~~~~g~l 163 (270)
T 1rwi_B 93 AAGSNNQTVLPFDGL-NYPEGLAVDTQGAVYVADRGN------NRVVKLAAGSKTQTVLPFTGL--NDPDGVAVDNSGNV 163 (270)
T ss_dssp CTTCSCCEECCCCSC-SSEEEEEECTTCCEEEEEGGG------TEEEEECTTCCSCEECCCCSC--CSCCCEEECTTCCE
T ss_pred eCCCceEeeeecCCc-CCCcceEECCCCCEEEEECCC------CEEEEEECCCceeEeeccccC--CCceeEEEeCCCCE
Confidence 998766444322111 112333333 67888875422 358888877665443321111 111223332 5789
Q ss_pred EEEecCcceEEEEECCCCCeeeccCCC-C-CCceEEE-cCeEEEEeC--cEEEEecCCc-eEEeccchhhcccceeEEEE
Q 019186 212 HVLHKGLSTVQVLDHMGLGWTVEDYGW-L-QGPMAIV-HDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFAMIG 285 (345)
Q Consensus 212 yv~gG~~~~i~~yd~~~~~W~~~~~~~-~-~~~~~~~-~~~l~~~~~--~~i~~~d~~~-W~~~~~~p~~~~r~~~~~~~ 285 (345)
|+.......+..||+....-....... . ...++.- +|.+|+... ..+..|+++. ........ ......+++.
T Consensus 164 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~--~~~~p~~i~~ 241 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFT--GLNTPLAVAV 241 (270)
T ss_dssp EEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCC--SCSCEEEEEE
T ss_pred EEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccC--CCCCceeEEE
Confidence 988755578999998876544332111 1 2233332 568999885 6899999876 22211111 1112234443
Q ss_pred E-CCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 286 M-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 286 ~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
- ++.||+....+ ..|.+|++...
T Consensus 242 ~~~g~l~v~~~~~------------~~v~~~~~~~~ 265 (270)
T 1rwi_B 242 DSDRTVYVADRGN------------DRVVKLTSLEH 265 (270)
T ss_dssp CTTCCEEEEEGGG------------TEEEEECCCGG
T ss_pred CCCCCEEEEECCC------------CEEEEEcCCCc
Confidence 3 56788875422 26778877654
No 38
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.70 E-value=0.011 Score=51.47 Aligned_cols=224 Identities=11% Similarity=0.001 Sum_probs=115.8
Q ss_pred CcEEEEEecCC-----CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCc
Q 019186 55 ENLLCVCAFDP-----ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFAT 127 (345)
Q Consensus 55 ~~~l~v~gg~~-----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~ 127 (345)
++.+|+..... ...++++|+.+++-...-+... . -.+++.. ++ .+|+.+.. .
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~-~~~~~~s~dg~~l~v~~~~----------------~ 110 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL----K-PFGATINNTTQTLWFGNTV----------------N 110 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS----C-CCSEEEETTTTEEEEEETT----------------T
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC----C-cceEEECCCCCEEEEEecC----------------C
Confidence 56777766432 4579999998886443322221 1 1223333 44 58877653 3
Q ss_pred CceEEEeCCCCCcccCCCCCC--------CceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCcc
Q 019186 128 NEVWSYDPVTRQWSPRASMLV--------PRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRT 197 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~--------~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~ 197 (345)
..++++|+.+++-...-.... +..-..++.. ++.+|+.+... ...+.+||+++.+-...-+....
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~ 185 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTGK 185 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCCT
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecCCCC
Confidence 479999998876422111111 0111233332 35577765221 24599999988764322111111
Q ss_pred CCCceeEEEEC-CEEEEEecCcceEEEEECCCCCeeec-cC--C-CCC--CceEEE--cCeEEEEeC--cEEEEecCCce
Q 019186 198 HNSACTGVVIG-GKVHVLHKGLSTVQVLDHMGLGWTVE-DY--G-WLQ--GPMAIV--HDSVYLMSH--GLIIKQHRDVR 266 (345)
Q Consensus 198 ~~~~~~~~~~~-~~iyv~gG~~~~i~~yd~~~~~W~~~-~~--~-~~~--~~~~~~--~~~l~~~~~--~~i~~~d~~~W 266 (345)
........-+ +.+|+.. ....+..+|+.+++-... .. . +.. ..++.. ++.+|+.+. +.++.+|.++.
T Consensus 186 -~~~~~~~s~dg~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 186 -MSTGLALDSEGKRLYTTN-ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp -TCCCCEEETTTTEEEEEC-TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred -ccceEEECCCCCEEEEEc-CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 1111122223 4577665 467889999987754322 11 1 111 112332 345777765 79999999874
Q ss_pred EEeccchhhcccceeEEEEECC-eEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 267 KVVASASEFRRRIGFAMIGMGD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 267 ~~~~~~p~~~~r~~~~~~~~~~-~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.+..++...+ ......-++ .+|+.+..+ ..+.+||+.+.
T Consensus 264 ~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~------------~~v~~~d~~~~ 304 (353)
T 3vgz_A 264 NILAKVAAPES--LAVLFNPARNEAYVTHRQA------------GKVSVIDAKSY 304 (353)
T ss_dssp CEEEEEECSSC--CCEEEETTTTEEEEEETTT------------TEEEEEETTTT
T ss_pred cEEEEEEcCCC--ceEEECCCCCEEEEEECCC------------CeEEEEECCCC
Confidence 44443332122 122222344 477764311 36888898776
No 39
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.65 E-value=0.0046 Score=52.27 Aligned_cols=147 Identities=10% Similarity=-0.092 Sum_probs=96.0
Q ss_pred cEEEEEecC-CCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 56 NLLCVCAFD-PENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 56 ~~l~v~gg~-~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
+.||+..|. ..+.+..+|+.+++=..--+++.. .+..+++..+++||+..-. .+.+++||
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~---~fgeGi~~~g~~lyv~t~~----------------~~~v~viD 92 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS---YFGEGLTLLNEKLYQVVWL----------------KNIGFIYD 92 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT---CCEEEEEEETTEEEEEETT----------------CSEEEEEE
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC---cceEEEEEeCCEEEEEEec----------------CCEEEEEE
Confidence 689998774 468999999999975443333322 3445677788999999753 46899999
Q ss_pred CCCCCcccCCCCCCC-ceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceE-eC--CCCCccCCCceeEEEECCE
Q 019186 135 PVTRQWSPRASMLVP-RAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-PI--PDLHRTHNSACTGVVIGGK 210 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~-r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~~--~~~~~~~~~~~~~~~~~~~ 210 (345)
+.+.+= +..++.. ....+++.-++++|+..| .+.+.++|+++.+=. .+ ...+.+...-......+++
T Consensus 93 ~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~ 163 (266)
T 2iwa_A 93 RRTLSN--IKNFTHQMKDGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGE 163 (266)
T ss_dssp TTTTEE--EEEEECCSSSCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTE
T ss_pred CCCCcE--EEEEECCCCCeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCE
Confidence 987652 2222222 234455555778998754 356999999986532 22 2222221112233445899
Q ss_pred EEEEecCcceEEEEECCCCC
Q 019186 211 VHVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~ 230 (345)
+|+--...+.+.+.|+++++
T Consensus 164 lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp EEEEETTSSEEEEEETTTCC
T ss_pred EEEecCCCCeEEEEECCCCc
Confidence 99876567899999999885
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.64 E-value=0.0039 Score=54.74 Aligned_cols=237 Identities=11% Similarity=0.053 Sum_probs=117.9
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+++.|+. ...+.+||..++++..+..+... ...-.+++.. ++.+++.|+. ...+.+|
T Consensus 19 ~~~~l~~~~~-d~~v~i~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~~~~~----------------dg~i~vw 79 (372)
T 1k8k_C 19 DRTQIAICPN-NHEVHIYEKSGNKWVQVHELKEH--NGQVTGVDWAPDSNRIVTCGT----------------DRNAYVW 79 (372)
T ss_dssp TSSEEEEECS-SSEEEEEEEETTEEEEEEEEECC--SSCEEEEEEETTTTEEEEEET----------------TSCEEEE
T ss_pred CCCEEEEEeC-CCEEEEEeCCCCcEEeeeeecCC--CCcccEEEEeCCCCEEEEEcC----------------CCeEEEE
Confidence 3344444432 46899999998876655444322 1222334444 5666666664 2358888
Q ss_pred eCCCCCcccCCCCC-CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCc-eEeCCCCCccCCCceeEEEE--C
Q 019186 134 DPVTRQWSPRASML-VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDV-WVPIPDLHRTHNSACTGVVI--G 208 (345)
Q Consensus 134 d~~t~~W~~~~~~~-~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~--~ 208 (345)
|..++++.....+. ....-.+++.. ++..++.|+.++ .+.+||..+.. |................+.. +
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 153 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC
Confidence 98887755432222 11112222322 566666665442 36777766554 33222211110112222222 5
Q ss_pred CEEEEEecCcceEEEEECCC------------------CCe-eeccCCCCC-CceEE-EcCeEEEEeC--cEEEEecCCc
Q 019186 209 GKVHVLHKGLSTVQVLDHMG------------------LGW-TVEDYGWLQ-GPMAI-VHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~~------------------~~W-~~~~~~~~~-~~~~~-~~~~l~~~~~--~~i~~~d~~~ 265 (345)
+..++.|+....+..||... ++- ......... ..++. .++.+++.++ +.+..||..+
T Consensus 154 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 154 SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGG
T ss_pred CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 66777776677889999642 111 111111011 11111 2454444444 6888888876
Q ss_pred eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCC--CCCceeEcCCCC
Q 019186 266 RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA--ERPTWRQVSPMT 331 (345)
Q Consensus 266 W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~--~~~~W~~v~~~~ 331 (345)
.+.+..+.............-++.+++.| .+ ..+.+||... + +|..+..+.
T Consensus 234 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d------------~~i~i~~~~~~~~--~~~~~~~~~ 286 (372)
T 1k8k_C 234 KMAVATLASETLPLLAVTFITESSLVAAG-HD------------CFPVLFTYDSAAG--KLSFGGRLD 286 (372)
T ss_dssp TTEEEEEECSSCCEEEEEEEETTEEEEEE-TT------------SSCEEEEEETTTT--EEEECCCCC
T ss_pred CceeEEEccCCCCeEEEEEecCCCEEEEE-eC------------CeEEEEEccCcCc--eEEEeeccC
Confidence 43333332111112222223366655554 22 1567888877 7 887775553
No 41
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.62 E-value=0.018 Score=49.28 Aligned_cols=220 Identities=11% Similarity=0.066 Sum_probs=109.8
Q ss_pred EEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeC
Q 019186 57 LLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDP 135 (345)
Q Consensus 57 ~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~ 135 (345)
.+++.|+ ....+.++|..+++....-.-.. ..-.+++.. ++++++.|+. ...+.+||.
T Consensus 36 ~~l~s~~-~dg~i~iw~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~~~----------------d~~i~vwd~ 94 (312)
T 4ery_A 36 EWLASSS-ADKLIKIWGAYDGKFEKTISGHK----LGISDVAWSSDSNLLVSASD----------------DKTLKIWDV 94 (312)
T ss_dssp SEEEEEE-TTSCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSEEEEEET----------------TSEEEEEET
T ss_pred CEEEEee-CCCeEEEEeCCCcccchhhccCC----CceEEEEEcCCCCEEEEECC----------------CCEEEEEEC
Confidence 3344443 23468888988776644211111 122234433 5667777764 246888998
Q ss_pred CCCCcccCCCCCCCcee-eeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEE
Q 019186 136 VTRQWSPRASMLVPRAM-FACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKV 211 (345)
Q Consensus 136 ~t~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~i 211 (345)
.+++-... +...... .++... ++.+++.|+.++ .+.+||..+.+-... +... ......+.. ++.+
T Consensus 95 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~ 163 (312)
T 4ery_A 95 SSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLKT--LPAH-SDPVSAVHFNRDGSL 163 (312)
T ss_dssp TTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETTS------CEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSE
T ss_pred CCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEEE--ecCC-CCcEEEEEEcCCCCE
Confidence 87652211 1111111 122222 456666666543 489999887653221 1111 111222222 5667
Q ss_pred EEEecCcceEEEEECCCCCeeeccCCCC--CCc-eEE-EcCeEEEEeC--cEEEEecCCceEEeccchhh---cccceeE
Q 019186 212 HVLHKGLSTVQVLDHMGLGWTVEDYGWL--QGP-MAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEF---RRRIGFA 282 (345)
Q Consensus 212 yv~gG~~~~i~~yd~~~~~W~~~~~~~~--~~~-~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~---~~r~~~~ 282 (345)
++.|+....+..||..+++-...-.... ... ++. .++..++.++ +.+..||..+.+.+..+... .......
T Consensus 164 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 243 (312)
T 4ery_A 164 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 243 (312)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEE
T ss_pred EEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEE
Confidence 7777777789999998776432211111 111 111 2455555544 78888887763333222110 1111112
Q ss_pred EEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 283 MIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 283 ~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
...-++.+++.|+.++ .|.+||+.+.
T Consensus 244 ~~~~~~~~l~sg~~dg------------~i~vwd~~~~ 269 (312)
T 4ery_A 244 FSVTGGKWIVSGSEDN------------LVYIWNLQTK 269 (312)
T ss_dssp EECSSSCEEEECCTTS------------CEEEEETTTC
T ss_pred EEeCCCcEEEEECCCC------------EEEEEECCCc
Confidence 2223566777776433 5778888765
No 42
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.59 E-value=0.025 Score=47.74 Aligned_cols=213 Identities=12% Similarity=0.097 Sum_probs=111.5
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccc-cceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRH-LAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVW 131 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~ 131 (345)
++.+|+... ....+..||+.......+......... ..-.+++.. ++.+|+.+.. ....+.
T Consensus 40 ~g~l~v~~~-~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~---------------~~~~i~ 103 (286)
T 1q7f_A 40 QNDIIVADT-NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS---------------PTHQIQ 103 (286)
T ss_dssp TCCEEEEEG-GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG---------------GGCEEE
T ss_pred CCCEEEEEC-CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC---------------CCCEEE
Confidence 456777653 235788999885544443321110000 122345552 6789988642 134688
Q ss_pred EEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--C
Q 019186 132 SYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G 208 (345)
Q Consensus 132 ~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~ 208 (345)
+||...+.-..+..... ..-..+++. ++++|+.... ...+.+||+.......+.... . ......+.+ +
T Consensus 104 ~~d~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~-~-~~~p~~i~~~~~ 174 (286)
T 1q7f_A 104 IYNQYGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSK-H-LEFPNGVVVNDK 174 (286)
T ss_dssp EECTTSCEEEEECTTTC-SCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTT-T-CSSEEEEEECSS
T ss_pred EECCCCcEEEEecCccC-CCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCC-c-cCCcEEEEECCC
Confidence 89964443332322111 112233332 6788887542 245899998765444332111 1 112233333 5
Q ss_pred CEEEEEecCcceEEEEECCCCCeeeccCC---CCCCceEE-EcCeEEEEeC--c-EEEEecCCc--eEEeccchhhcccc
Q 019186 209 GKVHVLHKGLSTVQVLDHMGLGWTVEDYG---WLQGPMAI-VHDSVYLMSH--G-LIIKQHRDV--RKVVASASEFRRRI 279 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~~~~W~~~~~~---~~~~~~~~-~~~~l~~~~~--~-~i~~~d~~~--W~~~~~~p~~~~r~ 279 (345)
+.+|+.......+.+||+.......+... .....++. .+|.+|+.+. . .+..||++. -..+.... ....
T Consensus 175 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~--~~~~ 252 (286)
T 1q7f_A 175 QEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV--KHAQ 252 (286)
T ss_dssp SEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS--CCSC
T ss_pred CCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccC--CCCc
Confidence 78999875567899999866544444321 11223333 3678999885 4 899999765 22221111 0111
Q ss_pred eeEEEEE-CCeEEEEc
Q 019186 280 GFAMIGM-GDDIYVIG 294 (345)
Q Consensus 280 ~~~~~~~-~~~l~i~G 294 (345)
..+++.- ++++|+..
T Consensus 253 ~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 253 CFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEEEEEETTTEEEEEE
T ss_pred ceeEEECCCCcEEEEC
Confidence 2344433 67888873
No 43
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.53 E-value=0.012 Score=53.52 Aligned_cols=173 Identities=13% Similarity=0.091 Sum_probs=87.8
Q ss_pred ceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEEC
Q 019186 129 EVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIG 208 (345)
Q Consensus 129 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 208 (345)
.+.+||..+.+-.. .+............++..++.|+.++ .+.+||..+.+-... +... ......+..+
T Consensus 260 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~--~~~~-~~~v~~~~~~ 328 (445)
T 2ovr_B 260 MVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLDT------SIRVWDVETGNCIHT--LTGH-QSLTSGMELK 328 (445)
T ss_dssp CEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETTS------CEEEEETTTCCEEEE--ECCC-CSCEEEEEEE
T ss_pred EEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCCC------eEEEEECCCCCEEEE--EcCC-cccEEEEEEe
Confidence 46667765543211 11111111222333666666666543 489999887653221 1111 2223334445
Q ss_pred CEEEEEecCcceEEEEECCCCCeee-ccC---CCCCCceEEEcCeEEEEeC--cEEEEecCCceEEeccch----hhccc
Q 019186 209 GKVHVLHKGLSTVQVLDHMGLGWTV-EDY---GWLQGPMAIVHDSVYLMSH--GLIIKQHRDVRKVVASAS----EFRRR 278 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~~~~W~~-~~~---~~~~~~~~~~~~~l~~~~~--~~i~~~d~~~W~~~~~~p----~~~~r 278 (345)
+..++.|+....+..||..+++-.. +.. ..........++.+++.++ +.+..+|..+.+.+..+. .....
T Consensus 329 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 408 (445)
T 2ovr_B 329 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG 408 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCc
Confidence 6666677677889999998765432 221 1112222334566655555 788889887744333321 00111
Q ss_pred ceeEEEE-ECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 279 IGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 279 ~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.-.+++. -++.++++|+.++.. -..+++||...+
T Consensus 409 ~v~~~~~s~~~~~la~~~~dg~~--------~~~l~v~df~~~ 443 (445)
T 2ovr_B 409 VVWRIRASNTKLVCAVGSRNGTE--------ETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEEECSSEEEEEEECSSSSS--------CCEEEEEECCCC
T ss_pred eEEEEEecCCEEEEEEcccCCCC--------ccEEEEEECCCC
Confidence 1122222 255667777766542 235788887654
No 44
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.53 E-value=0.0055 Score=53.02 Aligned_cols=240 Identities=10% Similarity=-0.036 Sum_probs=116.5
Q ss_pred CcEEEEEecCCCCeEEEEeCC--CCCEEeCCCCCccccccceeEEEEE-CCE-EEEEcCCCCCCCCCCCCCCCCcCcCce
Q 019186 55 ENLLCVCAFDPENLWQLYDPL--RDLWITLPVLPSKIRHLAHFGVVST-AGK-LFVLGGGSDAVDPLTGDQDGSFATNEV 130 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~--~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (345)
+..+|+.+.. ...+.+|+.. +++++.+..++.. ..-..++.. +++ ||+.+.. ...+
T Consensus 49 g~~l~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~----------------~~~i 108 (343)
T 1ri6_A 49 KRYLYVGVRP-EFRVLAYRIAPDDGALTFAAESALP---GSLTHISTDHQGQFVFVGSYN----------------AGNV 108 (343)
T ss_dssp SSEEEEEETT-TTEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECTTSSEEEEEETT----------------TTEE
T ss_pred CCEEEEeecC-CCeEEEEEecCCCCceeeccccccC---CCCcEEEEcCCCCEEEEEecC----------------CCeE
Confidence 5567666543 3678787776 7777765444332 112233333 444 6665532 2357
Q ss_pred EEEeCCCCC-cccCCCCCCCceeeeeeEe-C-CeEEEEcCcCCCCCCCceEEEEeCCC-CceEeCC--CCCccCCCceeE
Q 019186 131 WSYDPVTRQ-WSPRASMLVPRAMFACCAL-K-EKIVVAGGFTSCRKSISQAEMYDPEK-DVWVPIP--DLHRTHNSACTG 204 (345)
Q Consensus 131 ~~yd~~t~~-W~~~~~~~~~r~~~~~~~~-~-~~iyv~gG~~~~~~~~~~v~~yd~~~-~~W~~~~--~~~~~~~~~~~~ 204 (345)
.+||...+. ............-..++.. + ..+|+.+..+ ..+.+||..+ .+...+. ............
T Consensus 109 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
T 1ri6_A 109 SVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH 182 (343)
T ss_dssp EEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEE
T ss_pred EEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC------CEEEEEEecCCCceeeecccccccCCCCCcce
Confidence 778773221 1111111111112223333 3 3566654222 3589999887 5554322 111110111222
Q ss_pred EEE--CC-EEEEEecCcceEEEEECC--CCCeeec---cCCCCC------C-ceEEE-cC-eEEEEeC--cEEEEecCC-
Q 019186 205 VVI--GG-KVHVLHKGLSTVQVLDHM--GLGWTVE---DYGWLQ------G-PMAIV-HD-SVYLMSH--GLIIKQHRD- 264 (345)
Q Consensus 205 ~~~--~~-~iyv~gG~~~~i~~yd~~--~~~W~~~---~~~~~~------~-~~~~~-~~-~l~~~~~--~~i~~~d~~- 264 (345)
+.. ++ .+|+.+.....+..||.. ++++... ...+.. . .++.. ++ .||+.+. +.+..||.+
T Consensus 183 ~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 183 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 323 34 477777566788999984 3444322 111111 1 12222 34 5776654 677777766
Q ss_pred ---ceEEeccchhhcccceeEEEE-ECCe-EEEEcceecCCCCcccccccCceeee--ccCCCCCceeEcCCCCCccee
Q 019186 265 ---VRKVVASASEFRRRIGFAMIG-MGDD-IYVIGGVIGPDRWNWDIKPMSDVDVL--TVGAERPTWRQVSPMTRCRGT 336 (345)
Q Consensus 265 ---~W~~~~~~p~~~~r~~~~~~~-~~~~-l~i~GG~~~~~~~~~~~~~~~~v~~y--d~~~~~~~W~~v~~~~~~r~~ 336 (345)
+++.+..++.... ...++. -+++ ||+.++.+ ..+.+| |++++ ++.++..++.....
T Consensus 263 ~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~------------~~v~v~~~d~~~g--~~~~~~~~~~g~~p 325 (343)
T 1ri6_A 263 DGSVLSKEGFQPTETQ--PRGFNVDHSGKYLIAAGQKS------------HHISVYEIVGEQG--LLHEKGRYAVGQGP 325 (343)
T ss_dssp TSCCEEEEEEEECSSS--CCCEEECTTSSEEEEECTTT------------CEEEEEEEETTTT--EEEEEEEEECSSSC
T ss_pred CCCceEEeeeecCCCc--cceEEECCCCCEEEEecCCC------------CeEEEEEEcCCCc--eeeEccccccCCCC
Confidence 3666655442111 122332 2454 55544311 134455 77777 88888877765444
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.49 E-value=0.0095 Score=51.29 Aligned_cols=225 Identities=9% Similarity=-0.034 Sum_probs=111.1
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeC-CCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITL-PVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.+++.++ ...+.+||..+++.... ..+........-.+++.. +++.++.|+. ...+.+
T Consensus 62 ~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------------d~~i~~ 123 (337)
T 1gxr_A 62 PTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE----------------ASTLSI 123 (337)
T ss_dssp SSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----------------SSEEEE
T ss_pred CCcEEEEcC--CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC----------------CCcEEE
Confidence 444555554 57889999877642111 111000001122233333 4566666654 346889
Q ss_pred EeCCCCCcccCCCCCCCce-eeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--C
Q 019186 133 YDPVTRQWSPRASMLVPRA-MFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G 208 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~-~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~ 208 (345)
||..+++......+..... -.+++.. ++..++.|+.++ .+.+||..+.+.... +... ......+.. +
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~v~~~d~~~~~~~~~--~~~~-~~~i~~~~~~~~ 194 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG------NIAVWDLHNQTLVRQ--FQGH-TDGASCIDISND 194 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEE--ECCC-SSCEEEEEECTT
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC------cEEEEeCCCCceeee--eecc-cCceEEEEECCC
Confidence 9998876433322221111 1222222 566666665442 489999988764322 1111 112222223 5
Q ss_pred CEEEEEecCcceEEEEECCCCCeeeccCCCC-CCceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEE
Q 019186 209 GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QGPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMI 284 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~ 284 (345)
+..++.++....+..||+.+.+-........ ...++. .++.+++.+. +.+..||..+.+...... ..... ..+.
T Consensus 195 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~v-~~~~ 272 (337)
T 1gxr_A 195 GTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL-HESCV-LSLK 272 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC-CSSCE-EEEE
T ss_pred CCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC-Cccce-eEEE
Confidence 6666676677889999998775432211111 111111 2555555554 678888876622221111 01111 2222
Q ss_pred -EECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 285 -GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 285 -~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.-++++++.|+.+ ..+.+||..++
T Consensus 273 ~~~~~~~l~~~~~d------------g~i~~~~~~~~ 297 (337)
T 1gxr_A 273 FAYCGKWFVSTGKD------------NLLNAWRTPYG 297 (337)
T ss_dssp ECTTSSEEEEEETT------------SEEEEEETTTC
T ss_pred ECCCCCEEEEecCC------------CcEEEEECCCC
Confidence 2256777776633 25788888776
No 46
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.45 E-value=0.0074 Score=54.06 Aligned_cols=229 Identities=12% Similarity=0.053 Sum_probs=116.6
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
+.+++.+. ...+.+||..+++.......... ..-.+++.. ++.+++.|+. ...+.+||
T Consensus 104 ~~l~~~~~--d~~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~~----------------dg~i~iwd 162 (401)
T 4aez_A 104 LNVVAVAL--ERNVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGLG----------------NGLVDIYD 162 (401)
T ss_dssp TSEEEEEE--TTEEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEET----------------TSCEEEEE
T ss_pred CCEEEEEC--CCeEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEECC----------------CCeEEEEE
Confidence 33444432 46799999999887655433221 222334443 5666677664 23688899
Q ss_pred CCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEE
Q 019186 135 PVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVH 212 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iy 212 (345)
..+++-... +............++.+++.|+.+ ..+.+||..+..-. +..+... ......+.. ++.++
T Consensus 163 ~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~-~~~~~~~-~~~v~~~~~~~~~~~l 232 (401)
T 4aez_A 163 VESQTKLRT--MAGHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQ-IGTLQGH-SSEVCGLAWRSDGLQL 232 (401)
T ss_dssp TTTCCEEEE--ECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCE-EEEEECC-SSCEEEEEECTTSSEE
T ss_pred CcCCeEEEE--ecCCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcce-eeEEcCC-CCCeeEEEEcCCCCEE
Confidence 887653221 111122222333466666776654 35889998743211 1111111 112222222 56677
Q ss_pred EEecCcceEEEEECCCCCeee-ccCCCC-CCceEEE--cCeEEEEeC----cEEEEecCCceEEeccchhhcccceeEEE
Q 019186 213 VLHKGLSTVQVLDHMGLGWTV-EDYGWL-QGPMAIV--HDSVYLMSH----GLIIKQHRDVRKVVASASEFRRRIGFAMI 284 (345)
Q Consensus 213 v~gG~~~~i~~yd~~~~~W~~-~~~~~~-~~~~~~~--~~~l~~~~~----~~i~~~d~~~W~~~~~~p~~~~r~~~~~~ 284 (345)
+.|+....+..||..+.+-.. ...... ...++.. +..+++.++ +.+..+|..+.+.+..+.. .... ..++
T Consensus 233 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-~~~v-~~~~ 310 (401)
T 4aez_A 233 ASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-GSQV-TSLI 310 (401)
T ss_dssp EEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-SSCE-EEEE
T ss_pred EEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-CCcE-EEEE
Confidence 777777889999998764332 211111 2222222 345666642 7888888877433333321 1111 2222
Q ss_pred E-ECCeEEEE-cceecCCCCcccccccCceeeeccCCCCCceeEcCCC
Q 019186 285 G-MGDDIYVI-GGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPM 330 (345)
Q Consensus 285 ~-~~~~l~i~-GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~ 330 (345)
. -+++.+++ +|... ..+.+||..+. ....+..+
T Consensus 311 ~s~~~~~l~~~~g~~d-----------g~i~v~~~~~~--~~~~~~~~ 345 (401)
T 4aez_A 311 WSPHSKEIMSTHGFPD-----------NNLSIWSYSSS--GLTKQVDI 345 (401)
T ss_dssp ECSSSSEEEEEECTTT-----------CEEEEEEEETT--EEEEEEEE
T ss_pred ECCCCCeEEEEeecCC-----------CcEEEEecCCc--cceeEEEe
Confidence 2 24444444 34222 26778888776 55554433
No 47
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.45 E-value=0.041 Score=46.48 Aligned_cols=205 Identities=6% Similarity=-0.023 Sum_probs=111.0
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+... ....+..||+. ++...... +.. ...-.+++.. ++.+|+.... ...+++|
T Consensus 72 ~g~l~v~~~-~~~~v~~~d~~-g~~~~~~~-~~~--~~~~~~i~~~~~g~l~v~~~~----------------~~~i~~~ 130 (300)
T 2qc5_A 72 LGDIWFTEN-GANKIGKLSKK-GGFTEYPL-PQP--DSGPYGITEGLNGDIWFTQLN----------------GDRIGKL 130 (300)
T ss_dssp TSCEEEEET-TTTEEEEECTT-SCEEEEEC-SST--TCCEEEEEECSTTCEEEEETT----------------TTEEEEE
T ss_pred CCCEEEEec-CCCeEEEECCC-CCeEEecC-CCC--CCCCccceECCCCCEEEEccC----------------CCeEEEE
Confidence 456776542 24578999998 77665432 211 1223344444 6788887542 2468889
Q ss_pred eCCCCCcccCCCCC-CCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CC
Q 019186 134 DPVTRQWSPRASML-VPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GG 209 (345)
Q Consensus 134 d~~t~~W~~~~~~~-~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~ 209 (345)
|+. ++..... ++ ....-.+++. -++++|+.... ...+..||+ +.+..... .+.. ......+.. ++
T Consensus 131 ~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~-~~~~~~i~~d~~g 199 (300)
T 2qc5_A 131 TAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYP-LPTN-AAAPVGITSGNDG 199 (300)
T ss_dssp CTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEE-CSST-TCCEEEEEECTTS
T ss_pred CCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC------CCeEEEECC-CCcEEEee-CCCC-CCCcceEEECCCC
Confidence 987 5544322 11 1112233333 25778876532 245889998 56655432 2222 122333333 57
Q ss_pred EEEEEecCcceEEEEECCCCCeeeccCC--CC-CCceEE-EcCeEEEEeC--cEEEEecCCc-eEEeccchhhcccceeE
Q 019186 210 KVHVLHKGLSTVQVLDHMGLGWTVEDYG--WL-QGPMAI-VHDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFA 282 (345)
Q Consensus 210 ~iyv~gG~~~~i~~yd~~~~~W~~~~~~--~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~-W~~~~~~p~~~~r~~~~ 282 (345)
.+|+.......+.+||+ ++++...... .. ...++. -+|.||+... ..+..||++. .+... ++..... ..+
T Consensus 200 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~-~~~~~~~-~~~ 276 (300)
T 2qc5_A 200 ALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQ-LQTENAE-PHG 276 (300)
T ss_dssp SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEE-CCSTTCC-CCC
T ss_pred CEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEE-CCccCCc-cce
Confidence 89988644567999998 5666554211 11 222333 2678999884 7999999855 44332 1211111 233
Q ss_pred EEEE-CCeEEEEc
Q 019186 283 MIGM-GDDIYVIG 294 (345)
Q Consensus 283 ~~~~-~~~l~i~G 294 (345)
++.- +++||+.+
T Consensus 277 i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 277 ITFGKDGSVWFAL 289 (300)
T ss_dssp EEECTTSCEEEEC
T ss_pred eEeCCCCCEEEEc
Confidence 4433 56787764
No 48
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.43 E-value=0.013 Score=50.91 Aligned_cols=184 Identities=9% Similarity=-0.025 Sum_probs=94.7
Q ss_pred CcEEEEEecC--CCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEEC----CEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAFD--PENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTA----GKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg~--~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~----~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
+..+++.|+. ....+.+||..+++.......... ..-.+++... +.+++.|+. ..
T Consensus 30 ~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~----------------dg 90 (357)
T 3i2n_A 30 SAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA---KPIKCGTFGATSLQQRYLATGDF----------------GG 90 (357)
T ss_dssp SSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES---SCEEEEECTTCCTTTCCEEEEET----------------TS
T ss_pred CceEEEecCccCCCcEEEEEeCCCCcccceeeeccc---CcEEEEEEcCCCCCCceEEEecC----------------CC
Confidence 4466666654 256889999998876543322211 2222333333 366666664 24
Q ss_pred ceEEEeCCCCC--cccCCCCCCCceeeeee-------EeCCeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCcc
Q 019186 129 EVWSYDPVTRQ--WSPRASMLVPRAMFACC-------ALKEKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHRT 197 (345)
Q Consensus 129 ~~~~yd~~t~~--W~~~~~~~~~r~~~~~~-------~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~ 197 (345)
.+.+||..+.+ -..+...... -.++. .-++..++.|+.++ .+.+||..+.. ...+......
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~~ 162 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPVQGE 162 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETTS------CEEEECTTSCSSCSEEECCCTTS
T ss_pred eEEEEeCCCCCccEEEEEecccc--eEEEeeccccccCCCccEEEEEeCCC------eEEEEeCCCCCCcceeccccCCC
Confidence 68889988765 1111111111 11111 12455666665443 48899988764 3333322221
Q ss_pred -CCCceeEE-----EECCEEEEEecCcceEEEEECCCCCeeeccCCCC-CCceEEE----cCeEEEEeC--cEEEEecCC
Q 019186 198 -HNSACTGV-----VIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QGPMAIV----HDSVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 198 -~~~~~~~~-----~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~~----~~~l~~~~~--~~i~~~d~~ 264 (345)
.....+.+ .-++.+++.|+....+..||..+.+-........ ...++.. ++..++.++ +.+..||..
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 01122222 1467777777667889999998876433221111 1122222 455555554 678888876
Q ss_pred c
Q 019186 265 V 265 (345)
Q Consensus 265 ~ 265 (345)
+
T Consensus 243 ~ 243 (357)
T 3i2n_A 243 T 243 (357)
T ss_dssp E
T ss_pred C
Confidence 5
No 49
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.39 E-value=0.047 Score=46.02 Aligned_cols=219 Identities=7% Similarity=-0.050 Sum_probs=118.3
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+... ....+..||+. ++...+. ++.. ...-.+++.. ++.+|+.... ...++++
T Consensus 67 ~g~l~v~~~-~~~~i~~~~~~-g~~~~~~-~~~~--~~~~~~i~~~~~g~l~v~~~~----------------~~~i~~~ 125 (299)
T 2z2n_A 67 DGEVWFTEN-AANKIGRITKK-GIIKEYT-LPNP--DSAPYGITEGPNGDIWFTEMN----------------GNRIGRI 125 (299)
T ss_dssp TSCEEEEET-TTTEEEEECTT-SCEEEEE-CSST--TCCEEEEEECTTSCEEEEETT----------------TTEEEEE
T ss_pred CCCEEEeCC-CCCeEEEECCC-CcEEEEe-CCCc--CCCceeeEECCCCCEEEEecC----------------CceEEEE
Confidence 455666542 23568899986 5555443 2211 1223345544 5788887542 2468889
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGK 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ 210 (345)
|+ +++............-.+++.- ++.+|+.... ...+..||+ +.+..... .+.. ......+.. ++.
T Consensus 126 d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~-~~~~~~i~~~~~g~ 195 (299)
T 2z2n_A 126 TD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ------NNAIGRITE-SGDITEFK-IPTP-ASGPVGITKGNDDA 195 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEE-CSST-TCCEEEEEECTTSS
T ss_pred CC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC------CCEEEEEcC-CCcEEEee-CCCC-CCcceeEEECCCCC
Confidence 98 6555433211111222333333 6788886431 245899999 66665431 1222 112223333 567
Q ss_pred EEEEecCcceEEEEECCCCCeeeccCCC--C-CCceEE-EcCeEEEEeC--cEEEEecCCc-eEEeccchhhcccceeEE
Q 019186 211 VHVLHKGLSTVQVLDHMGLGWTVEDYGW--L-QGPMAI-VHDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFAM 283 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~W~~~~~~~--~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~-W~~~~~~p~~~~r~~~~~ 283 (345)
+|+.......+.+||+ +++........ . ...++. .+|.+|+... ..+..||++. ..... .+.. ...-.++
T Consensus 196 l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~-~~~~-~~~~~~i 272 (299)
T 2z2n_A 196 LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIEEYP-IQIK-SAEPHGI 272 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEEEEE-CSSS-SCCEEEE
T ss_pred EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCceEEEe-CCCC-CCccceE
Confidence 9888755678999999 77776542211 1 222333 2678998863 7899999854 33332 1111 1122344
Q ss_pred EEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 284 IGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 284 ~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.-++.||+... . +.+.+||++++
T Consensus 273 ~~~~g~l~v~~~---~----------~~l~~~~~~~~ 296 (299)
T 2z2n_A 273 CFDGETIWFAME---C----------DKIGKLTLIKD 296 (299)
T ss_dssp EECSSCEEEEET---T----------TEEEEEEEC--
T ss_pred EecCCCEEEEec---C----------CcEEEEEcCcc
Confidence 445677887643 1 25778888765
No 50
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.39 E-value=0.029 Score=50.42 Aligned_cols=236 Identities=9% Similarity=0.010 Sum_probs=117.3
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccce-eEEEE-ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAH-FGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.+++.++ ....+.++|+.+++............+... .+++. .++.+++.++. ...+.+
T Consensus 133 ~~~~~~~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~----------------d~~v~~ 195 (433)
T 3bws_A 133 NTRLAIPLL-EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ----------------ANAVHV 195 (433)
T ss_dssp SSEEEEEBT-TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG----------------GTEEEE
T ss_pred CCeEEEEeC-CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC----------------CCEEEE
Confidence 566666654 335699999998877654333211001111 22333 26778888764 347899
Q ss_pred EeCCCCCcccCCCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--C
Q 019186 133 YDPVTRQWSPRASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G 208 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~ 208 (345)
||+.+.+....-.. ....-.+++.. +..+|+.++.+ ..+.+||+.+.+....-. .. . ....+.. +
T Consensus 196 ~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~--~~-~-~~~~~~~~~~ 264 (433)
T 3bws_A 196 FDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKTD--KI-G-LPRGLLLSKD 264 (433)
T ss_dssp EETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEECC--CC-S-EEEEEEECTT
T ss_pred EECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEec--CC-C-CceEEEEcCC
Confidence 99987653221111 11111223332 44566666433 358999998876543222 12 1 1222332 4
Q ss_pred C-EEEEEec-------CcceEEEEECCCCCeeeccCCCC-CCceEE-EcC-eEEEEeC--cEEEEecCCceEEeccchhh
Q 019186 209 G-KVHVLHK-------GLSTVQVLDHMGLGWTVEDYGWL-QGPMAI-VHD-SVYLMSH--GLIIKQHRDVRKVVASASEF 275 (345)
Q Consensus 209 ~-~iyv~gG-------~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~-~~~-~l~~~~~--~~i~~~d~~~W~~~~~~p~~ 275 (345)
+ .+++.+. ....+..||+.+++-........ ...++. .++ .+|+.+. +.+..||.++.+.+..++.
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~- 343 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV- 343 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-
Confidence 4 4554431 13578899998775433211111 111222 234 5777755 7899999887554444431
Q ss_pred cccceeEEEEE-CCeEEEEcceecCCC---CcccccccCceeeeccCCC
Q 019186 276 RRRIGFAMIGM-GDDIYVIGGVIGPDR---WNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 276 ~~r~~~~~~~~-~~~l~i~GG~~~~~~---~~~~~~~~~~v~~yd~~~~ 320 (345)
......++.- +++.+++++...... --.....-..+++||+.+.
T Consensus 344 -~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 344 -FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp -SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred -CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC
Confidence 1112233332 455444444322100 0000001137899999776
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.30 E-value=0.025 Score=48.41 Aligned_cols=208 Identities=12% Similarity=0.042 Sum_probs=100.8
Q ss_pred EEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCC
Q 019186 58 LCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPV 136 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~ 136 (345)
+++.|+. ...+.+||..+++-... +... ...-.+++.. ++.+++.|+. ...+.+||..
T Consensus 79 ~l~s~~~-d~~i~vwd~~~~~~~~~--~~~~--~~~v~~~~~~~~~~~l~s~~~----------------d~~i~iwd~~ 137 (312)
T 4ery_A 79 LLVSASD-DKTLKIWDVSSGKCLKT--LKGH--SNYVFCCNFNPQSNLIVSGSF----------------DESVRIWDVK 137 (312)
T ss_dssp EEEEEET-TSEEEEEETTTCCEEEE--EECC--SSCEEEEEECSSSSEEEEEET----------------TSCEEEEETT
T ss_pred EEEEECC-CCEEEEEECCCCcEEEE--EcCC--CCCEEEEEEcCCCCEEEEEeC----------------CCcEEEEECC
Confidence 3344432 35788999887753221 1111 0111223332 4566666664 2468889988
Q ss_pred CCCcccCCCCCCCcee-eeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE--ECCEEE
Q 019186 137 TRQWSPRASMLVPRAM-FACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVH 212 (345)
Q Consensus 137 t~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~~iy 212 (345)
+++-.. .+...... .+++.. ++.+++.|+.++ .+.+||..+.+-...-.... ......+. -++..+
T Consensus 138 ~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 138 TGKCLK--TLPAHSDPVSAVHFNRDGSLIVSSSYDG------LCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYI 207 (312)
T ss_dssp TCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCSS--CCCEEEEEECTTSSEE
T ss_pred CCEEEE--EecCCCCcEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCceeeEEeccC--CCceEEEEECCCCCEE
Confidence 765321 11111111 122222 566777776543 48999988765432111111 11112222 256666
Q ss_pred EEecCcceEEEEECCCCCeeec-cCCCC--C--Cc-eEEEcCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEE
Q 019186 213 VLHKGLSTVQVLDHMGLGWTVE-DYGWL--Q--GP-MAIVHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMI 284 (345)
Q Consensus 213 v~gG~~~~i~~yd~~~~~W~~~-~~~~~--~--~~-~~~~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~ 284 (345)
+.++....+..||..+.+-... ..... . .. ....++.+++.++ +.+..+|.++-+.+..+............
T Consensus 208 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 287 (312)
T 4ery_A 208 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC 287 (312)
T ss_dssp EEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEee
Confidence 6666778899999987753322 11111 1 11 1113556666665 67888888764444333211111212222
Q ss_pred EECCeEEEEcce
Q 019186 285 GMGDDIYVIGGV 296 (345)
Q Consensus 285 ~~~~~l~i~GG~ 296 (345)
.-++.+++.++.
T Consensus 288 ~p~~~~l~s~~~ 299 (312)
T 4ery_A 288 HPTENIIASAAL 299 (312)
T ss_dssp CSSSSEEEEEEC
T ss_pred cCcCCceEEEEc
Confidence 235666666654
No 52
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.28 E-value=0.064 Score=45.21 Aligned_cols=218 Identities=6% Similarity=-0.018 Sum_probs=118.8
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+... ....+..||+. ++...... +.. ...-.+++.. ++.+|+.... ...+.+|
T Consensus 30 ~g~l~v~~~-~~~~v~~~~~~-~~~~~~~~-~~~--~~~~~~i~~~~~g~l~v~~~~----------------~~~v~~~ 88 (300)
T 2qc5_A 30 DGKVWFTQH-KANKISSLDQS-GRIKEFEV-PTP--DAKVMCLIVSSLGDIWFTENG----------------ANKIGKL 88 (300)
T ss_dssp TSCEEEEET-TTTEEEEECTT-SCEEEEEC-SST--TCCEEEEEECTTSCEEEEETT----------------TTEEEEE
T ss_pred CCCEEEEcC-CCCeEEEECCC-CceEEEEC-CCC--CCcceeEEECCCCCEEEEecC----------------CCeEEEE
Confidence 566777653 34678999998 77665432 211 0222344443 5778887542 3468899
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGK 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ 210 (345)
|+. ++............-.++++- ++.+|+.... ...+..||++ .+..... ++.. ......+.. +++
T Consensus 89 d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~~d~~g~ 158 (300)
T 2qc5_A 89 SKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYD-LPNK-GSYPAFITLGSDNA 158 (300)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEE-CSST-TCCEEEEEECTTSS
T ss_pred CCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEcc-CCCC-CCCceeEEECCCCC
Confidence 987 665543211111222334433 6788887532 2358889987 5554332 2212 122233333 577
Q ss_pred EEEEecCcceEEEEECCCCCeeeccCCC--C-CCceEE-EcCeEEEEeC--cEEEEecCCc-eEEeccchhhcccceeEE
Q 019186 211 VHVLHKGLSTVQVLDHMGLGWTVEDYGW--L-QGPMAI-VHDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFAM 283 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~W~~~~~~~--~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~-W~~~~~~p~~~~r~~~~~ 283 (345)
+|+.......+.+||+ +++........ . ...++. .+|.+|+... ..+..|++.. ...... +... ....++
T Consensus 159 l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~-~~~~-~~~~~i 235 (300)
T 2qc5_A 159 LWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDI-PTPN-ARPHAI 235 (300)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEEC-SSTT-CCEEEE
T ss_pred EEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEEC-CCCC-CCceEE
Confidence 8887644567999998 66665542211 1 222332 2678999875 6899999854 444321 1111 122334
Q ss_pred EEE-CCeEEEEcceecCCCCcccccccCceeeeccC
Q 019186 284 IGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVG 318 (345)
Q Consensus 284 ~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~ 318 (345)
+.- +++||+.... ...+.+||++
T Consensus 236 ~~d~~g~l~v~~~~------------~~~i~~~~~~ 259 (300)
T 2qc5_A 236 TAGKNSEIWFTEWG------------ANQIGRITND 259 (300)
T ss_dssp EECSTTCEEEEETT------------TTEEEEECTT
T ss_pred EECCCCCEEEeccC------------CCeEEEECCC
Confidence 332 5678886421 1256777773
No 53
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.0032 Score=55.37 Aligned_cols=237 Identities=9% Similarity=0.020 Sum_probs=116.5
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-C--CEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-A--GKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
+.+++.|+. ...+.+||...+++..+..+... ...-.+++.. + +.+++.|+. ...+.+
T Consensus 23 ~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~l~s~~~----------------dg~v~i 83 (379)
T 3jrp_A 23 GKRLATCSS-DKTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSY----------------DGKVLI 83 (379)
T ss_dssp SSEEEEEET-TSCEEEEEEETTEEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEET----------------TSCEEE
T ss_pred CCEEEEEEC-CCcEEEEecCCCcceeeeEecCC--CCcEEEEEeCCCCCCCEEEEecc----------------CCEEEE
Confidence 334444432 35688888876666655444322 1122234432 2 566777664 236888
Q ss_pred EeCCCCCcccCCCCCCCcee-eeeeEe-C--CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-
Q 019186 133 YDPVTRQWSPRASMLVPRAM-FACCAL-K--EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI- 207 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~-~~~~~~-~--~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~- 207 (345)
||..+++|..+..+...... .+++.. + +.+++.|+.+ ..+.+||..+..-.....+......-.++...
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECC
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCCCCceEEEEEcC
Confidence 99988877655443322222 222222 3 5666666644 34888988776321110111110111122221
Q ss_pred -------------CCEEEEEecCcceEEEEECCCCC--eeeccCCCC----CCceEE-Ec---CeEEEEeC--cEEEEec
Q 019186 208 -------------GGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL----QGPMAI-VH---DSVYLMSH--GLIIKQH 262 (345)
Q Consensus 208 -------------~~~iyv~gG~~~~i~~yd~~~~~--W~~~~~~~~----~~~~~~-~~---~~l~~~~~--~~i~~~d 262 (345)
++.+++.|+....+..||..++. +........ ...++. .+ +.+++.++ +.+..||
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp CC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred ccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 46777777767788899886553 433321111 111222 23 55555554 5666666
Q ss_pred CCc----eEEe-ccchhhcccceeEEE-EECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCC
Q 019186 263 RDV----RKVV-ASASEFRRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMT 331 (345)
Q Consensus 263 ~~~----W~~~-~~~p~~~~r~~~~~~-~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~ 331 (345)
... +... .... .....-..++ .-+++.+++|+.++ .+.+||.... ..|..+..+.
T Consensus 238 ~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg------------~i~iw~~~~~-~~~~~~~~~~ 298 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN------------KVTLWKENLE-GKWEPAGEVH 298 (379)
T ss_dssp ESSTTSCCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESSS------------SEEEEEEEET-TEEEEEEEEC
T ss_pred CCCCCccceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCCC------------cEEEEeCCCC-Ccccccccee
Confidence 554 1211 1110 0111112222 23667777776432 5778888632 1788776543
No 54
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.28 E-value=0.015 Score=50.48 Aligned_cols=202 Identities=8% Similarity=0.028 Sum_probs=99.9
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
...+.++|..+++-... +... .....+++.. +++.++.|+. ...+.+||..+.+-...-
T Consensus 101 D~~i~lWd~~~~~~~~~--~~~~--~~~~~~~~~spdg~~l~~g~~----------------dg~v~i~~~~~~~~~~~~ 160 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKS--IDAG--PVDAWTLAFSPDSQYLATGTH----------------VGKVNIFGVESGKKEYSL 160 (321)
T ss_dssp TSEEEEEETTTTEEEEE--EECC--TTCCCCEEECTTSSEEEEECT----------------TSEEEEEETTTCSEEEEE
T ss_pred CCcEEEEECCCCCEEEE--EeCC--CccEEEEEECCCCCEEEEEcC----------------CCcEEEEEcCCCceeEEe
Confidence 45788899887653221 1111 0112223333 5666667664 346788888766422110
Q ss_pred CCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceE-eCCCCCccCCCceeEEEECCEEEEEecCcceEE
Q 019186 145 SMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-PIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQ 222 (345)
Q Consensus 145 ~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~ 222 (345)
.. ....-.+++.. +++.++.|+.++ .+.+||.++.+-. .+..-..+ .......-++.+++.|+....+.
T Consensus 161 ~~-~~~~v~~~~~spdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~~--v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 161 DT-RGKFILSIAYSPDGKYLASGAIDG------IINIFDIATGKLLHTLEGHAMP--IRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp EC-SSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCSSC--CCEEEECTTSCEEEEECTTSCEE
T ss_pred cC-CCceEEEEEECCCCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCCc--eeEEEEcCCCCEEEEEcCCCeEE
Confidence 00 11111222222 567777776543 4899999887532 22211111 11111223677777887777899
Q ss_pred EEECCCCCeeec-cCCCCC-CceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEEE-ECCeEEEEcce
Q 019186 223 VLDHMGLGWTVE-DYGWLQ-GPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIG-MGDDIYVIGGV 296 (345)
Q Consensus 223 ~yd~~~~~W~~~-~~~~~~-~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~-~~~~l~i~GG~ 296 (345)
.||..+.+.... ...... ..++. .++..++.++ +.+..+|..+.+.+..+....... .+++. -+++.++.||.
T Consensus 232 iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v-~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 232 IYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQV-WGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECTTSSEEEEEET
T ss_pred EEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcE-EEEEECCCCCEEEEEeC
Confidence 999987655332 111111 11111 2555555554 678888887755544433111111 22222 25667777774
Q ss_pred e
Q 019186 297 I 297 (345)
Q Consensus 297 ~ 297 (345)
+
T Consensus 311 d 311 (321)
T 3ow8_A 311 D 311 (321)
T ss_dssp T
T ss_pred C
Confidence 4
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.27 E-value=0.017 Score=49.63 Aligned_cols=202 Identities=9% Similarity=-0.019 Sum_probs=100.0
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
...+.+||..+++......+... ...-.+++.. ++..++.|+. ...+.+||..+++....-
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~----------------dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSS--APACYALAISPDSKVCFSCCS----------------DGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECS--SSCEEEEEECTTSSEEEEEET----------------TSCEEEEETTTTEEEEEE
T ss_pred CCcEEEEECCCCCcceeeecccC--CCceEEEEECCCCCEEEEEeC----------------CCcEEEEeCCCCceeeee
Confidence 35789999988875443322221 0122233443 5566666654 246889999876532211
Q ss_pred CCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE-EECCEEEEEecCcceEE
Q 019186 145 SMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGGKVHVLHKGLSTVQ 222 (345)
Q Consensus 145 ~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~iyv~gG~~~~i~ 222 (345)
... ...-.+++.. ++..++.++.+ ..+.+||..+.+-...-..... ..+.. .-++..+++|+....+.
T Consensus 180 ~~~-~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~~~~i~ 249 (337)
T 1gxr_A 180 QGH-TDGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDFTSQ---IFSLGYCPTGEWLAVGMESSNVE 249 (337)
T ss_dssp CCC-SSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSSC---EEEEEECTTSSEEEEEETTSCEE
T ss_pred ecc-cCceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecCCCc---eEEEEECCCCCEEEEEcCCCcEE
Confidence 111 1111222222 56666666543 3589999887753322111111 11222 22566667776677899
Q ss_pred EEECCCCCeeeccCCCCCC-ceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEEE-ECCeEEEEccee
Q 019186 223 VLDHMGLGWTVEDYGWLQG-PMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIG-MGDDIYVIGGVI 297 (345)
Q Consensus 223 ~yd~~~~~W~~~~~~~~~~-~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~-~~~~l~i~GG~~ 297 (345)
.||..+.+-.......... .++. .++++++.++ +.+..||.++-+.+.... ....-.+++. -+++.++.|+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 250 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp EEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEEEETT
T ss_pred EEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec--CCCcEEEEEECCCCCEEEEecCC
Confidence 9999877544332221111 1222 2455555544 788888877633332211 1111122222 256677776643
No 56
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.25 E-value=0.055 Score=45.05 Aligned_cols=179 Identities=16% Similarity=0.072 Sum_probs=100.3
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+... ...+..||+..+....+..... ..-.+++.. ++++|+.... ...++++
T Consensus 77 ~g~l~v~~~--~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~----------------~~~i~~~ 134 (270)
T 1rwi_B 77 AGTVYVTDF--NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQGAVYVADRG----------------NNRVVKL 134 (270)
T ss_dssp TCCEEEEET--TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTCCEEEEEGG----------------GTEEEEE
T ss_pred CCCEEEEcC--CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCCCEEEEECC----------------CCEEEEE
Confidence 455887765 5689999998876554432111 122344444 6778887542 3468888
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGK 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ 210 (345)
+..+.......... ...-.+++.. ++++|+..... ..+.+||+.+..-...... . ......+.. ++.
T Consensus 135 ~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~--~-~~~p~~i~~d~~g~ 204 (270)
T 1rwi_B 135 AAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTDN------NRVVKLEAESNNQVVLPFT--D-ITAPWGIAVDEAGT 204 (270)
T ss_dssp CTTCCSCEECCCCS-CCSCCCEEECTTCCEEEEEGGG------TEEEEECTTTCCEEECCCS--S-CCSEEEEEECTTCC
T ss_pred ECCCceeEeecccc-CCCceeEEEeCCCCEEEEECCC------CEEEEEecCCCceEeeccc--C-CCCceEEEECCCCC
Confidence 77665443222111 1112233333 57888875422 3589999887664433211 1 122333444 468
Q ss_pred EEEEecCcceEEEEECCCCCeeeccCCC-C-CCceEE-EcCeEEEEeC--cEEEEecCCc
Q 019186 211 VHVLHKGLSTVQVLDHMGLGWTVEDYGW-L-QGPMAI-VHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~W~~~~~~~-~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~ 265 (345)
+|+.......+.+||+....-....... . ...++. .+|.||+.+. ..|..|+...
T Consensus 205 l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 205 VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 9988755677999998766443332211 1 223333 2578888875 6788777644
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.24 E-value=0.0029 Score=55.95 Aligned_cols=150 Identities=13% Similarity=0.062 Sum_probs=74.7
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+++.|+ ....+.+||..++.|+.+..+... ...-.+++.. ++.+++.|+. ...+.+|
T Consensus 22 ~g~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~----------------d~~v~vw 82 (377)
T 3dwl_C 22 QRTEFVTTT-ATNQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSNRIVTCSQ----------------DRNAYVY 82 (377)
T ss_dssp SSSEEECCC-SSSCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTCCEEEEET----------------TSSEEEC
T ss_pred CCCEEEEec-CCCEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCCEEEEEeC----------------CCeEEEE
Confidence 344444443 345788899988888777666542 1222334443 4566666664 2468889
Q ss_pred eCCCCC-cccCCCCCCCcee-eeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCc-eEeCCCCCccCCCceeEEEE--
Q 019186 134 DPVTRQ-WSPRASMLVPRAM-FACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDV-WVPIPDLHRTHNSACTGVVI-- 207 (345)
Q Consensus 134 d~~t~~-W~~~~~~~~~r~~-~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~-- 207 (345)
|..+++ |.....+...... .+++.. ++..++.|+.++ .+.+||..+.+ |..+..+..+.......+..
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 156 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP 156 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCEEECSSCCSCEEEEEECT
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeeeEeecccCCCeEEEEEcC
Confidence 998876 5443332222212 222222 566666665442 38888887764 43333333211222222222
Q ss_pred CCEEEEEecCcceEEEEECCCC
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGL 229 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~ 229 (345)
++++++.|+....+..||..+.
T Consensus 157 ~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 157 NNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp TSSEEEEEESSSCEEEEEECCS
T ss_pred CCCEEEEEeCCCEEEEEEEEec
Confidence 5667777766677889997543
No 58
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.23 E-value=0.076 Score=44.96 Aligned_cols=209 Identities=12% Similarity=0.003 Sum_probs=111.2
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCC--EEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDL--WITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
.+.+++.+ .....+.++|+.+++ |+.-..-. . ..+...+.-+|.+++.+ ...+..
T Consensus 4 ~~~~lv~~-~~~~~v~~~d~~tG~~~w~~~~~~~-~---~~~~~~~~pdG~ilvs~------------------~~~V~~ 60 (276)
T 3no2_A 4 PQHLLVGG-SGWNKIAIINKDTKEIVWEYPLEKG-W---ECNSVAATKAGEILFSY------------------SKGAKM 60 (276)
T ss_dssp CCEEEEEC-TTCSEEEEEETTTTEEEEEEECCTT-C---CCCEEEECTTSCEEEEC------------------BSEEEE
T ss_pred CCcEEEee-CCCCEEEEEECCCCeEEEEeCCCcc-C---CCcCeEECCCCCEEEeC------------------CCCEEE
Confidence 44555555 345788999997875 65432211 1 22333334477888842 235888
Q ss_pred EeCCCCC--cccCCCCCCCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCc-eEeC-C-CCCcc-CCCceeEE
Q 019186 133 YDPVTRQ--WSPRASMLVPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDV-WVPI-P-DLHRT-HNSACTGV 205 (345)
Q Consensus 133 yd~~t~~--W~~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~-~-~~~~~-~~~~~~~~ 205 (345)
||+ +++ |+.-.. .....+++.. .++.+++..... ...+..+|++... |+.- . ..... ........
T Consensus 61 ~d~-~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~ 132 (276)
T 3no2_A 61 ITR-DGRELWNIAAP--AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINK 132 (276)
T ss_dssp ECT-TSCEEEEEECC--TTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEE
T ss_pred ECC-CCCEEEEEcCC--CCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceE
Confidence 998 554 654331 1112223333 366666664321 2357888875442 4421 1 11111 01122233
Q ss_pred EECCEEEEEecCcceEEEEECCCC-CeeeccCCCCCCceEEEcCeEEEEeC--cEEEEecCCc----eEEecc-chhhcc
Q 019186 206 VIGGKVHVLHKGLSTVQVLDHMGL-GWTVEDYGWLQGPMAIVHDSVYLMSH--GLIIKQHRDV----RKVVAS-ASEFRR 277 (345)
Q Consensus 206 ~~~~~iyv~gG~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~~l~~~~~--~~i~~~d~~~----W~~~~~-~p~~~~ 277 (345)
..++.+++.......+.+||++.+ .|+.-............+|.+++.+. ..++.+|+++ |+.-.. ++...-
T Consensus 133 ~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l 212 (276)
T 3no2_A 133 NKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQL 212 (276)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCC
T ss_pred CCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccc
Confidence 446777777655678999999732 47654332222333334778888765 5899999985 877532 221001
Q ss_pred cceeEEEEE-CCeEEEEc
Q 019186 278 RIGFAMIGM-GDDIYVIG 294 (345)
Q Consensus 278 r~~~~~~~~-~~~l~i~G 294 (345)
..-.+++.. ++.+|+..
T Consensus 213 ~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 213 FFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SEEEEEEECTTSCEEEEE
T ss_pred cccccceEcCCCCEEEEe
Confidence 112334444 77888876
No 59
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.21 E-value=0.012 Score=51.14 Aligned_cols=170 Identities=10% Similarity=0.034 Sum_probs=86.3
Q ss_pred CceEEEeCCCCCccc-CCCCCCCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE
Q 019186 128 NEVWSYDPVTRQWSP-RASMLVPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV 205 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~ 205 (345)
..+.+||..+++-.. +...+. ...+++. -++..++.|+.+ ..+.+||.++..-... +........+++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~~~~~--~~~~~~~v~~~~ 171 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPV--DAWTLAFSPDSQYLATGTHV------GKVNIFGVESGKKEYS--LDTRGKFILSIA 171 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTT--CCCCEEECTTSSEEEEECTT------SEEEEEETTTCSEEEE--EECSSSCEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCc--cEEEEEECCCCCEEEEEcCC------CcEEEEEcCCCceeEE--ecCCCceEEEEE
Confidence 468889987765322 111111 1112222 256666776644 3488888877653211 111101111222
Q ss_pred -EECCEEEEEecCcceEEEEECCCCCeee-ccCCCC-CCceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhcccc
Q 019186 206 -VIGGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWL-QGPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRI 279 (345)
Q Consensus 206 -~~~~~iyv~gG~~~~i~~yd~~~~~W~~-~~~~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~ 279 (345)
.-+++.++.|+....+..||+.+++-.. +..... ...++. .++.+++.++ +.+..+|..+.+.+..+.......
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v 251 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 251 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCce
Confidence 2266777777777889999998775432 221111 112222 3566666665 678888877643333332101111
Q ss_pred eeEEE-EECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 280 GFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 280 ~~~~~-~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
..++ .-++..++.|+.++ .|.+||+.+.
T Consensus 252 -~~~~~sp~~~~l~s~s~D~------------~v~iwd~~~~ 280 (321)
T 3ow8_A 252 -LNVAFCPDDTHFVSSSSDK------------SVKVWDVGTR 280 (321)
T ss_dssp -EEEEECTTSSEEEEEETTS------------CEEEEETTTT
T ss_pred -EEEEECCCCCEEEEEeCCC------------cEEEEeCCCC
Confidence 1222 22567777776443 4778888765
No 60
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.20 E-value=0.011 Score=53.52 Aligned_cols=183 Identities=13% Similarity=0.102 Sum_probs=100.8
Q ss_pred EEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCc
Q 019186 97 VVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSIS 176 (345)
Q Consensus 97 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~ 176 (345)
....++..++.|+. ...+.+||..+.+-... +............++.+++.|+.++
T Consensus 138 ~~~~d~~~l~~g~~----------------dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~dg------ 193 (435)
T 1p22_A 138 CLQYDDQKIVSGLR----------------DNTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSDS------ 193 (435)
T ss_dssp EEECCSSEEEEEES----------------SSCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS------
T ss_pred EEEECCCEEEEEeC----------------CCeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCCC------
Confidence 33457777777775 34688999877653221 1111222233334777777777553
Q ss_pred eEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCee----eccCCCCCCceEEEcCeEEE
Q 019186 177 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWT----VEDYGWLQGPMAIVHDSVYL 252 (345)
Q Consensus 177 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~----~~~~~~~~~~~~~~~~~l~~ 252 (345)
.+.+||..+.+-... +... ......+..++..++.|+....+..||..+..-. ..............++..++
T Consensus 194 ~i~vwd~~~~~~~~~--~~~h-~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 270 (435)
T 1p22_A 194 TVRVWDVNTGEMLNT--LIHH-CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIV 270 (435)
T ss_dssp CEEEEESSSCCEEEE--ECCC-CSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEE
T ss_pred eEEEEECCCCcEEEE--EcCC-CCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEE
Confidence 389999888764321 1122 2223334445566677767788999998776432 11111111222233555555
Q ss_pred EeC--cEEEEecCCceEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 253 MSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 253 ~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.++ +.+..+|.++.+.+..+.. ....-.....++..++.|+.++ .|.+||+.+.
T Consensus 271 s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~g~~dg------------~i~iwd~~~~ 326 (435)
T 1p22_A 271 SASGDRTIKVWNTSTCEFVRTLNG--HKRGIACLQYRDRLVVSGSSDN------------TIRLWDIECG 326 (435)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTEEEEEETTS------------CEEEEETTTC
T ss_pred EEeCCCeEEEEECCcCcEEEEEcC--CCCcEEEEEeCCCEEEEEeCCC------------eEEEEECCCC
Confidence 554 7888999877444433331 1111223344667777776433 5778888765
No 61
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.20 E-value=0.017 Score=52.03 Aligned_cols=224 Identities=11% Similarity=0.019 Sum_probs=113.0
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.+++.++ ....+.+||..+++....-.... ..-.+++.. +..+|+.++. ...+.+
T Consensus 180 ~~~~~~s~~-~d~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~----------------~~~i~~ 238 (433)
T 3bws_A 180 HNELWVSQM-QANAVHVFDLKTLAYKATVDLTG----KWSKILLYDPIRDLVYCSNWI----------------SEDISV 238 (433)
T ss_dssp GTEEEEEEG-GGTEEEEEETTTCCEEEEEECSS----SSEEEEEEETTTTEEEEEETT----------------TTEEEE
T ss_pred CCEEEEEEC-CCCEEEEEECCCceEEEEEcCCC----CCeeEEEEcCCCCEEEEEecC----------------CCcEEE
Confidence 455666554 34678999998765432211111 122234443 3457677643 246899
Q ss_pred EeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCC--CCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--
Q 019186 133 YDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRK--SISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-- 207 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~--~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-- 207 (345)
||+.+++....-.. ...-.+++.. +++.+++++...... .-..+.+||+.+.+-..... .. . ....+..
T Consensus 239 ~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--~~-~-~~~~~~~~~ 312 (433)
T 3bws_A 239 IDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--PP-G-NKRHIVSGN 312 (433)
T ss_dssp EETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--EE-E-CEEEEEECS
T ss_pred EECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--CC-C-CcceEEECC
Confidence 99987764332221 1222233332 454444444322111 13478999998875432211 11 1 1112222
Q ss_pred CC-EEEEEecCcceEEEEECCCCCeeec-cCCCCCCceEE-EcC-eEEEEeCc----------------EEEEecCCceE
Q 019186 208 GG-KVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAI-VHD-SVYLMSHG----------------LIIKQHRDVRK 267 (345)
Q Consensus 208 ~~-~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~-~~~-~l~~~~~~----------------~i~~~d~~~W~ 267 (345)
++ .+|+.++....+..||+.+++-... +.......++. .++ .+|+.+.. .++.+|.++.+
T Consensus 313 ~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 313 TENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred CCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 33 6888877778899999987654322 21111122222 234 46655542 89999988755
Q ss_pred EeccchhhcccceeEEEE-ECCeEEEEcceecCCCCcccccccCceeeeccC
Q 019186 268 VVASASEFRRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVG 318 (345)
Q Consensus 268 ~~~~~p~~~~r~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~ 318 (345)
.+..++. ...-.+++. -+++.+++++... ..+.+|+++
T Consensus 393 ~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d-----------~~i~v~~~~ 431 (433)
T 3bws_A 393 VKEFWEA--GNQPTGLDVSPDNRYLVISDFLD-----------HQIRVYRRD 431 (433)
T ss_dssp EEEEEEC--SSSEEEEEECTTSCEEEEEETTT-----------TEEEEEEET
T ss_pred EEEEecC--CCCCceEEEcCCCCEEEEEECCC-----------CeEEEEEec
Confidence 5544431 111223332 2555555554222 257777765
No 62
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.19 E-value=0.094 Score=45.36 Aligned_cols=215 Identities=11% Similarity=0.028 Sum_probs=110.1
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccc-----cccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCc
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKI-----RHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFAT 127 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~-----~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~ 127 (345)
+..+|+.+. ....+..+|+.+++-...-...... .+..-.+++.. ++.+|+.+.. ..
T Consensus 100 g~~l~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------------~~ 163 (353)
T 3vgz_A 100 TQTLWFGNT-VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG---------------KE 163 (353)
T ss_dssp TTEEEEEET-TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES---------------SS
T ss_pred CCEEEEEec-CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC---------------CC
Confidence 445666554 3358899999888643322221110 00112334443 3457777632 13
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCC-Cc-cCCCcee
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDL-HR-THNSACT 203 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~-~~-~~~~~~~ 203 (345)
..++++|+.+.+-...-.. ....-..++.. +..+|+... ...+.+||..+.+-...-.. .. +......
T Consensus 164 ~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEHFFIN 235 (353)
T ss_dssp CEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCCCEEE
T ss_pred ceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCcccce
Confidence 4699999987763322111 11111233332 345666543 24688999988763322111 11 1011222
Q ss_pred EEEE--CCEEEEEecCcceEEEEECCCCCeeeccCCCCCCceEE-EcC-eEEEEeC--cEEEEecCCceEEeccchhhcc
Q 019186 204 GVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAI-VHD-SVYLMSH--GLIIKQHRDVRKVVASASEFRR 277 (345)
Q Consensus 204 ~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~-~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~ 277 (345)
++.. ++.+|+.....+.+..||+.+++....-.......++. .++ .+|+.+. +.+..+|.++.+.+..++. .
T Consensus 236 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~--~ 313 (353)
T 3vgz_A 236 ISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT--P 313 (353)
T ss_dssp EEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC--C
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec--C
Confidence 2332 45688877556889999998876543222222223332 244 4888875 8999999987555544441 2
Q ss_pred cceeEEEEE-CCe-EEEEcc
Q 019186 278 RIGFAMIGM-GDD-IYVIGG 295 (345)
Q Consensus 278 r~~~~~~~~-~~~-l~i~GG 295 (345)
....+++.- +++ ||+...
T Consensus 314 ~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 314 THPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp SEEEEEEECTTSCEEEEEEE
T ss_pred CCCCeEEEcCCCCEEEEEEc
Confidence 222333332 454 666543
No 63
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.16 E-value=0.051 Score=46.48 Aligned_cols=222 Identities=9% Similarity=-0.017 Sum_probs=106.6
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
+.+++.|+ ....+.++|..+++-.. .+... ...-.++... ++..++.|+. ...+.+||
T Consensus 25 ~~~l~s~~-~dg~v~lWd~~~~~~~~--~~~~~--~~~v~~~~~~~~~~~l~s~s~----------------d~~i~vwd 83 (304)
T 2ynn_A 25 EPWVLTTL-YSGRVELWNYETQVEVR--SIQVT--ETPVRAGKFIARKNWIIVGSD----------------DFRIRVFN 83 (304)
T ss_dssp SSEEEEEE-TTSEEEEEETTTTEEEE--EEECC--SSCEEEEEEEGGGTEEEEEET----------------TSEEEEEE
T ss_pred CCEEEEEc-CCCcEEEEECCCCceeE--Eeecc--CCcEEEEEEeCCCCEEEEECC----------------CCEEEEEE
Confidence 33444443 24678899988775322 11111 0111223333 5566666664 24688899
Q ss_pred CCCCCcccCCCCCCC-ceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE---CC
Q 019186 135 PVTRQWSPRASMLVP-RAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI---GG 209 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~-r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~---~~ 209 (345)
..+++-.. .+... ..-.+++.. ++.+++.|+.++ .+.+||.+++. .....+... ......+.. ++
T Consensus 84 ~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~sgs~D~------~v~lWd~~~~~-~~~~~~~~h-~~~v~~v~~~p~~~ 153 (304)
T 2ynn_A 84 YNTGEKVV--DFEAHPDYIRSIAVHPTKPYVLSGSDDL------TVKLWNWENNW-ALEQTFEGH-EHFVMCVAFNPKDP 153 (304)
T ss_dssp TTTCCEEE--EEECCSSCEEEEEECSSSSEEEEEETTS------CEEEEEGGGTT-EEEEEECCC-CSCEEEEEECTTCT
T ss_pred CCCCcEEE--EEeCCCCcEEEEEEcCCCCEEEEECCCC------eEEEEECCCCc-chhhhhccc-CCcEEEEEECCCCC
Confidence 88765211 11111 111222322 456666666543 38888876642 111111111 112222333 45
Q ss_pred EEEEEecCcceEEEEECCCCCe--eeccCCCCCCceEEE----cCeEEEEeC--cEEEEecCCceEEeccchhhccccee
Q 019186 210 KVHVLHKGLSTVQVLDHMGLGW--TVEDYGWLQGPMAIV----HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGF 281 (345)
Q Consensus 210 ~iyv~gG~~~~i~~yd~~~~~W--~~~~~~~~~~~~~~~----~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~ 281 (345)
.+++.|+.-..+..||..+..- ............... ++.+++.++ +.|..+|..+.+.+..+.........
T Consensus 154 ~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (304)
T ss_dssp TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEE
Confidence 6777777778899999865432 111111011111111 344444444 78888888774444433311122222
Q ss_pred EEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 282 AMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 282 ~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
....-++.+++.|+.++ .|.+||..+.
T Consensus 234 ~~~~p~~~~l~s~s~Dg------------~i~iWd~~~~ 260 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDG------------TLKIWNSSTY 260 (304)
T ss_dssp EEECSSSSEEEEEETTS------------CEEEEETTTC
T ss_pred EEECCCCCEEEEEcCCC------------eEEEEECCCC
Confidence 22233566777776443 4677887765
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.15 E-value=0.049 Score=49.45 Aligned_cols=133 Identities=11% Similarity=0.046 Sum_probs=73.0
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV 206 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 206 (345)
..+.+||..+.+-...-.. ....-.+++.. ++..++.|+.++ .+.+||..+.+-.. .+... ......+.
T Consensus 290 ~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg------~i~vwd~~~~~~~~--~~~~h-~~~v~~~~ 359 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSG-HTDRIYSTIYDHERKRCISASMDT------TIRIWDLENGELMY--TLQGH-TALVGLLR 359 (464)
T ss_dssp SCEEEEETTTTEEEEEECC-CSSCEEEEEEETTTTEEEEEETTS------CEEEEETTTTEEEE--EECCC-SSCEEEEE
T ss_pred CeEEEEECCCCcEEEEecC-CCCCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCcEEE--EEeCC-CCcEEEEE
Confidence 4688999876653221111 11111222222 556666666543 48999998765321 12222 22334455
Q ss_pred ECCEEEEEecCcceEEEEECCCCCeeec--cCCCCCCceEEEcCeEEEEeC-cEEEEecCCceEEec
Q 019186 207 IGGKVHVLHKGLSTVQVLDHMGLGWTVE--DYGWLQGPMAIVHDSVYLMSH-GLIIKQHRDVRKVVA 270 (345)
Q Consensus 207 ~~~~iyv~gG~~~~i~~yd~~~~~W~~~--~~~~~~~~~~~~~~~l~~~~~-~~i~~~d~~~W~~~~ 270 (345)
.++..++.|+....+..||+.+..-... ............++.+++.++ +.+..+|.++-+.+.
T Consensus 360 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 360 LSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH 426 (464)
T ss_dssp ECSSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEE
T ss_pred EcCCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEe
Confidence 5677777776778899999987643222 111112223345666666655 788899988744443
No 65
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.14 E-value=0.014 Score=50.37 Aligned_cols=225 Identities=9% Similarity=-0.024 Sum_probs=116.4
Q ss_pred CCcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceE
Q 019186 54 SENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVW 131 (345)
Q Consensus 54 ~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~ 131 (345)
.++.+|+.... ...+.++|+.+++.......+.. .. .++.. ++ .+|+.+.. ...++
T Consensus 8 ~~~~~~v~~~~-~~~v~~~d~~~~~~~~~~~~~~~----~~-~~~~s~dg~~l~~~~~~----------------~~~i~ 65 (331)
T 3u4y_A 8 TSNFGIVVEQH-LRRISFFSTDTLEILNQITLGYD----FV-DTAITSDCSNVVVTSDF----------------CQTLV 65 (331)
T ss_dssp CCCEEEEEEGG-GTEEEEEETTTCCEEEEEECCCC----EE-EEEECSSSCEEEEEEST----------------TCEEE
T ss_pred CCCEEEEEecC-CCeEEEEeCcccceeeeEEccCC----cc-eEEEcCCCCEEEEEeCC----------------CCeEE
Confidence 46777877653 46899999999987654433321 12 44443 44 47777652 34799
Q ss_pred EEeCCCCCc-cc-CCCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE-
Q 019186 132 SYDPVTRQW-SP-RASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV- 206 (345)
Q Consensus 132 ~yd~~t~~W-~~-~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~- 206 (345)
++|+.+++. .. +.....+ .++++.. +..+| .+... .....+.+||.++.+-... ++.. .....++.
T Consensus 66 ~~d~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~-~~~~~---~~~~~i~v~d~~~~~~~~~--~~~~-~~~~~~~~s 136 (331)
T 3u4y_A 66 QIETQLEPPKVVAIQEGQSS--MADVDITPDDQFAV-TVTGL---NHPFNMQSYSFLKNKFIST--IPIP-YDAVGIAIS 136 (331)
T ss_dssp EEECSSSSCEEEEEEECSSC--CCCEEECTTSSEEE-ECCCS---SSSCEEEEEETTTTEEEEE--EECC-TTEEEEEEC
T ss_pred EEECCCCceeEEecccCCCC--ccceEECCCCCEEE-EecCC---CCcccEEEEECCCCCeEEE--EECC-CCccceEEC
Confidence 999988764 21 1111111 1213332 34466 33221 1123799999988765432 1222 11222222
Q ss_pred ECC-EEEEEecCcce-EEEEECCCCC-e-----eeccCCCCCCceEE-EcCe-EEEEeC--cEEEEecCCceEE---ecc
Q 019186 207 IGG-KVHVLHKGLST-VQVLDHMGLG-W-----TVEDYGWLQGPMAI-VHDS-VYLMSH--GLIIKQHRDVRKV---VAS 271 (345)
Q Consensus 207 ~~~-~iyv~gG~~~~-i~~yd~~~~~-W-----~~~~~~~~~~~~~~-~~~~-l~~~~~--~~i~~~d~~~W~~---~~~ 271 (345)
-++ .+|+.+..... +..|+...+. . ..+........++. .+|+ +|+.+. +.+..||.++.+. +..
T Consensus 137 pdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~ 216 (331)
T 3u4y_A 137 PNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA 216 (331)
T ss_dssp TTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred CCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee
Confidence 244 48887654455 7777765432 1 11111111122222 2554 777765 7898998876333 444
Q ss_pred chhhcccceeEEE-EECCe-EEEEcceecCCCCcccccccCceeeeccCCCCCcee
Q 019186 272 ASEFRRRIGFAMI-GMGDD-IYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWR 325 (345)
Q Consensus 272 ~p~~~~r~~~~~~-~~~~~-l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~ 325 (345)
++. ......++ .-+++ +|+..... +.+.+||+++. +..
T Consensus 217 ~~~--~~~~~~~~~spdg~~l~v~~~~~------------~~i~~~d~~~~--~~~ 256 (331)
T 3u4y_A 217 VGT--NNLPGTIVVSRDGSTVYVLTEST------------VDVFNFNQLSG--TLS 256 (331)
T ss_dssp EEC--SSCCCCEEECTTSSEEEEECSSE------------EEEEEEETTTT--EEE
T ss_pred ccC--CCCCceEEECCCCCEEEEEEcCC------------CEEEEEECCCC--cee
Confidence 442 11112233 23455 66654311 25788998877 553
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.12 E-value=0.04 Score=49.19 Aligned_cols=211 Identities=7% Similarity=0.004 Sum_probs=104.2
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASM 146 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~ 146 (345)
..+.+||..+++.... +... .........++.+++.|+. ...+.+||..+..-. +..+
T Consensus 156 g~i~iwd~~~~~~~~~--~~~~---~~~v~~~~~~~~~l~~~~~----------------dg~i~i~d~~~~~~~-~~~~ 213 (401)
T 4aez_A 156 GLVDIYDVESQTKLRT--MAGH---QARVGCLSWNRHVLSSGSR----------------SGAIHHHDVRIANHQ-IGTL 213 (401)
T ss_dssp SCEEEEETTTCCEEEE--ECCC---SSCEEEEEEETTEEEEEET----------------TSEEEEEETTSSSCE-EEEE
T ss_pred CeEEEEECcCCeEEEE--ecCC---CCceEEEEECCCEEEEEcC----------------CCCEEEEecccCcce-eeEE
Confidence 4677888776653321 1111 1122223335566666664 346888988743211 1111
Q ss_pred CCCc-eeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceE-eCCCCCccCCCceeEEEE--CCEEEEEec--Ccc
Q 019186 147 LVPR-AMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-PIPDLHRTHNSACTGVVI--GGKVHVLHK--GLS 219 (345)
Q Consensus 147 ~~~r-~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~--~~~iyv~gG--~~~ 219 (345)
.... .-.+++.. ++..++.|+.++ .+.+||..+..-. .+...... -.++... +..+++.|+ ...
T Consensus 214 ~~~~~~v~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~---v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDGLQLASGGNDN------VVQIWDARSSIPKFTKTNHNAA---VKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTCSSEEEEECCCSSC---CCEEEECTTSTTEEEEECCTTTC
T ss_pred cCCCCCeeEEEEcCCCCEEEEEeCCC------eEEEccCCCCCccEEecCCcce---EEEEEECCCCCCEEEEecCCCCC
Confidence 1111 11222222 566777776543 4899998875432 22111111 1222222 346777764 578
Q ss_pred eEEEEECCCCCeeeccCCCC-CCceEE-EcCeEEEE--eC--cEEEEecCCc--eEEeccchhhcccceeEEEEECCeEE
Q 019186 220 TVQVLDHMGLGWTVEDYGWL-QGPMAI-VHDSVYLM--SH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIY 291 (345)
Q Consensus 220 ~i~~yd~~~~~W~~~~~~~~-~~~~~~-~~~~l~~~--~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~ 291 (345)
.+..||..+++-...-.... ...++. .++..++. |. +.+..||..+ ...+..++....+.......-+++.+
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l 364 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRIL 364 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEE
Confidence 89999998775433211111 111111 24444444 32 6777777665 44443333212233332333367777
Q ss_pred EEcceecCCCCcccccccCceeeeccCCC
Q 019186 292 VIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 292 i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.|+.++ .+.+||+.+.
T Consensus 365 ~s~~~dg------------~i~iw~~~~~ 381 (401)
T 4aez_A 365 STAASDE------------NLKFWRVYDG 381 (401)
T ss_dssp EEECTTS------------EEEEEECCC-
T ss_pred EEEeCCC------------cEEEEECCCC
Confidence 7777432 5788999876
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.09 E-value=0.12 Score=45.93 Aligned_cols=222 Identities=6% Similarity=0.022 Sum_probs=108.7
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
+.+++.|+. ...+.+||..+++-... +... ...-.+++.. ++.+++.|+. ...+.+||
T Consensus 109 ~~~l~~~~~-dg~i~iwd~~~~~~~~~--~~~h--~~~v~~~~~~~~~~~l~s~s~----------------d~~i~iwd 167 (420)
T 3vl1_A 109 MRRFILGTT-EGDIKVLDSNFNLQREI--DQAH--VSEITKLKFFPSGEALISSSQ----------------DMQLKIWS 167 (420)
T ss_dssp SCEEEEEET-TSCEEEECTTSCEEEEE--TTSS--SSCEEEEEECTTSSEEEEEET----------------TSEEEEEE
T ss_pred CCEEEEEEC-CCCEEEEeCCCcceeee--cccc--cCccEEEEECCCCCEEEEEeC----------------CCeEEEEe
Confidence 334444432 35788999887654332 1111 1222334443 5566666664 24688999
Q ss_pred CCCCCcccCCCCCCCc-eeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceE-eCCCCCccCCCceeEE------
Q 019186 135 PVTRQWSPRASMLVPR-AMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-PIPDLHRTHNSACTGV------ 205 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r-~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~~~------ 205 (345)
..+.+-.. .+.... .-.+++.. ++..++.|+.++ .+.+||..+.+-. .+...... ......+
T Consensus 168 ~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~ 238 (420)
T 3vl1_A 168 VKDGSNPR--TLIGHRATVTDIAIIDRGRNVLSASLDG------TIRLWECGTGTTIHTFNRKENP-HDGVNSIALFVGT 238 (420)
T ss_dssp TTTCCCCE--EEECCSSCEEEEEEETTTTEEEEEETTS------CEEEEETTTTEEEEEECBTTBT-TCCEEEEEEEECC
T ss_pred CCCCcCce--EEcCCCCcEEEEEEcCCCCEEEEEcCCC------cEEEeECCCCceeEEeecCCCC-CCCccEEEEecCC
Confidence 87664211 111111 11222333 566666666543 3888998876532 22111111 1111111
Q ss_pred -----------------EECCEEEEEecCcceEEEEECCCCCeeeccCCCC--C-CceEE-EcCe-EEEEeC--cEEEEe
Q 019186 206 -----------------VIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL--Q-GPMAI-VHDS-VYLMSH--GLIIKQ 261 (345)
Q Consensus 206 -----------------~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~--~-~~~~~-~~~~-l~~~~~--~~i~~~ 261 (345)
.-++.+++.|+....+..||+.+.+-...-.... . ..++. .++. +++.++ +.+..+
T Consensus 239 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vw 318 (420)
T 3vl1_A 239 DRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQW 318 (420)
T ss_dssp CSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred cceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEE
Confidence 1256777777777789999998775322211111 1 11121 2444 454544 788888
Q ss_pred cCCceEE-eccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCC
Q 019186 262 HRDVRKV-VASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 319 (345)
Q Consensus 262 d~~~W~~-~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~ 319 (345)
|..+-+. +..+.......-..+...++++++.|+.++ .|.+||+..
T Consensus 319 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~------------~v~iw~~~~ 365 (420)
T 3vl1_A 319 DLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDT------------SIKLDIISD 365 (420)
T ss_dssp ETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTE------------EEEEEEECC
T ss_pred EcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCc------------cEEEEeccC
Confidence 8765211 111110011122333445778888877443 466777654
No 68
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.08 E-value=0.1 Score=43.67 Aligned_cols=190 Identities=7% Similarity=-0.070 Sum_probs=108.1
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.||+... ....+..+|+....-..+..... ..-+++++. ++.||+.-.. ...+.+
T Consensus 47 ~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~----~~p~~ia~d~~~~~lyv~d~~----------------~~~I~~ 105 (267)
T 1npe_A 47 DKVVYWTDI-SEPSIGRASLHGGEPTTIIRQDL----GSPEGIALDHLGRTIFWTDSQ----------------LDRIEV 105 (267)
T ss_dssp TTEEEEEET-TTTEEEEEESSSCCCEEEECTTC----CCEEEEEEETTTTEEEEEETT----------------TTEEEE
T ss_pred CCEEEEEEC-CCCEEEEEecCCCCcEEEEECCC----CCccEEEEEecCCeEEEEECC----------------CCEEEE
Confidence 567777653 34688999987764333221111 112345554 5789998642 357888
Q ss_pred EeCCCCCcccCCCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE---
Q 019186 133 YDPVTRQWSPRASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--- 207 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--- 207 (345)
+++....-+.+...... .-..+++- ++.||+..... ....++++++....-+.+... . ......+.+
T Consensus 106 ~~~~g~~~~~~~~~~~~-~P~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~--~-~~~P~gia~d~~ 177 (267)
T 1npe_A 106 AKMDGTQRRVLFDTGLV-NPRGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQD--N-LGLPNGLTFDAF 177 (267)
T ss_dssp EETTSCSCEEEECSSCS-SEEEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECT--T-CSCEEEEEEETT
T ss_pred EEcCCCCEEEEEECCCC-CccEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEEC--C-CCCCcEEEEcCC
Confidence 98865432222111111 11233333 68899985321 135688888765433332211 1 112233333
Q ss_pred CCEEEEEecCcceEEEEECCCCCeeec-cCCCCCCceEEEcCeEEEEeC--cEEEEecCCceEEeccch
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIVHDSVYLMSH--GLIIKQHRDVRKVVASAS 273 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~l~~~~~--~~i~~~d~~~W~~~~~~p 273 (345)
++.||+.....+.|.+||+....-..+ .....+..++.-++.+|+.+. ..+..+|+++.+.+..++
T Consensus 178 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 178 SSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 578999976678899999975432222 222224456667889999986 799999998755554444
No 69
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.07 E-value=0.12 Score=46.51 Aligned_cols=222 Identities=10% Similarity=-0.050 Sum_probs=116.2
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS 145 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 145 (345)
..++++|.....-+.+..-. ..-.+++.. +++.+++++... ....++++|+.+++...+..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-----~~v~~~~~Spdg~~la~~s~~~-------------~~~~i~~~d~~tg~~~~l~~ 220 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-----QPLMSPAWSPDGSKLAYVTFES-------------GRSALVIQTLANGAVRQVAS 220 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-----SCEEEEEECTTSSEEEEEECTT-------------SSCEEEEEETTTCCEEEEEC
T ss_pred ceEEEEcCCCCCCEEEeCCC-----CcceeeEEcCCCCEEEEEEecC-------------CCcEEEEEECCCCcEEEeec
Confidence 58899998765544432211 122233333 566555555422 13579999999887665443
Q ss_pred CCCCceeeeeeEe-CCe-EEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE-EECCE-EEEEec--Ccc
Q 019186 146 MLVPRAMFACCAL-KEK-IVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGGK-VHVLHK--GLS 219 (345)
Q Consensus 146 ~~~~r~~~~~~~~-~~~-iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~-iyv~gG--~~~ 219 (345)
... ...+.+.. +++ |++.+..++ ...++++|..+.+...+...... ..... .-+++ |++.+. ...
T Consensus 221 ~~~--~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~~---~~~~~~spdg~~l~~~s~~~g~~ 291 (415)
T 2hqs_A 221 FPR--HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRSN---NTEPTWFPDSQNLAFTSDQAGRP 291 (415)
T ss_dssp CSS--CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSSC---EEEEEECTTSSEEEEEECTTSSC
T ss_pred CCC--cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCCc---ccceEECCCCCEEEEEECCCCCc
Confidence 322 12222222 454 544443322 35699999998877665432211 11112 22555 444442 234
Q ss_pred eEEEEECCCCCeeeccCCCCC-CceE-EEcCeEEEEeC-----cEEEEecCCc--eEEeccchhhcccceeEEEEECCeE
Q 019186 220 TVQVLDHMGLGWTVEDYGWLQ-GPMA-IVHDSVYLMSH-----GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDI 290 (345)
Q Consensus 220 ~i~~yd~~~~~W~~~~~~~~~-~~~~-~~~~~l~~~~~-----~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l 290 (345)
.++.+|..+++-..+...... ..++ ..+|+.+++.. ..++.+|.++ .+.+... .........-+++.
T Consensus 292 ~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~----~~~~~~~~spdg~~ 367 (415)
T 2hqs_A 292 QVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST----FLDETPSLAPNGTM 367 (415)
T ss_dssp EEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS----SSCEEEEECTTSSE
T ss_pred EEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC----CCcCCeEEcCCCCE
Confidence 788999988765554322111 1111 13555444332 4788888876 4333221 11212222336777
Q ss_pred EEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCC
Q 019186 291 YVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPM 330 (345)
Q Consensus 291 ~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~ 330 (345)
+++++.++.. ..++++|+..+ .-+++...
T Consensus 368 l~~~s~~~~~---------~~l~~~d~~g~--~~~~l~~~ 396 (415)
T 2hqs_A 368 VIYSSSQGMG---------SVLNLVSTDGR--FKARLPAT 396 (415)
T ss_dssp EEEEEEETTE---------EEEEEEETTSC--CEEECCCS
T ss_pred EEEEEcCCCc---------cEEEEEECCCC--cEEEeeCC
Confidence 7777754431 37899999876 66666543
No 70
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.05 E-value=0.044 Score=46.26 Aligned_cols=180 Identities=13% Similarity=0.067 Sum_probs=93.6
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+.+......+..||+....-..+..... ..-.+++.. ++++|+.... ...+.+|
T Consensus 88 ~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~----~~~~~i~~~~~g~l~v~~~~----------------~~~i~~~ 147 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL----QHPRGVTVDNKGRIIVVECK----------------VMRVIIF 147 (286)
T ss_dssp TTEEEEEECGGGCEEEEECTTSCEEEEECTTTC----SCEEEEEECTTSCEEEEETT----------------TTEEEEE
T ss_pred CCeEEEEcCCCCCEEEEECCCCcEEEEecCccC----CCceEEEEeCCCCEEEEECC----------------CCEEEEE
Confidence 567777763324678899965544333322111 112334443 5778887643 3468899
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGK 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ 210 (345)
|+..+....+........-.++++- ++.+|+..... ..+.+||+.......+.... . ......+.+ ++.
T Consensus 148 ~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~g-~-~~~p~~i~~d~~G~ 219 (286)
T 1q7f_A 148 DQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA------HCVKVFNYEGQYLRQIGGEG-I-TNYPIGVGINSNGE 219 (286)
T ss_dssp CTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG------TEEEEEETTCCEEEEESCTT-T-SCSEEEEEECTTCC
T ss_pred cCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC------CEEEEEcCCCCEEEEEccCC-c-cCCCcEEEECCCCC
Confidence 9765543333211111112233333 57888875432 45899998765444443211 1 122233333 678
Q ss_pred EEEEecCcc-eEEEEECCCCCeeeccCCCC---CCceEE-EcCeEEEEeC-cEEEEec
Q 019186 211 VHVLHKGLS-TVQVLDHMGLGWTVEDYGWL---QGPMAI-VHDSVYLMSH-GLIIKQH 262 (345)
Q Consensus 211 iyv~gG~~~-~i~~yd~~~~~W~~~~~~~~---~~~~~~-~~~~l~~~~~-~~i~~~d 262 (345)
+|+.....+ .+..||+....-..+..... ...++. .+|++|+.+. ..+..|+
T Consensus 220 l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~ 277 (286)
T 1q7f_A 220 ILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYR 277 (286)
T ss_dssp EEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEE
Confidence 999875444 89999976543333321111 112222 3667777654 4454444
No 71
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.057 Score=45.77 Aligned_cols=150 Identities=8% Similarity=0.031 Sum_probs=73.7
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCeee-ccCC
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV-EDYG 237 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~-~~~~ 237 (345)
++..++.++.++ .+.+||..+.. ..+...... ........-++. ++.|+....+..||..+.+-.. ....
T Consensus 154 ~~~~l~~~~~d~------~i~i~d~~~~~-~~~~~~~~~-~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~ 224 (313)
T 3odt_A 154 SENKFLTASADK------TIKLWQNDKVI-KTFSGIHND-VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGH 224 (313)
T ss_dssp TTTEEEEEETTS------CEEEEETTEEE-EEECSSCSS-CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEECCC------CEEEEecCceE-EEEeccCcc-cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcC
Confidence 566666665443 37888833322 222221112 222222344677 5666677889999998765332 2111
Q ss_pred CC-CCceEE-EcCeEEEEeC-cEEEEecCCceEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceee
Q 019186 238 WL-QGPMAI-VHDSVYLMSH-GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDV 314 (345)
Q Consensus 238 ~~-~~~~~~-~~~~l~~~~~-~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~ 314 (345)
.. ...++. .++.++..+. +.+..+|.++.+.+..+.............-+++ ++.|+.+ ..+.+
T Consensus 225 ~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d------------g~i~i 291 (313)
T 3odt_A 225 ESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSD------------NLVRI 291 (313)
T ss_dssp SSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETT------------SCEEE
T ss_pred CceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCC------------CcEEE
Confidence 11 112222 2555555544 7899999877443333321112222222223556 4555533 26889
Q ss_pred eccCCCCCceeEcCCCCC
Q 019186 315 LTVGAERPTWRQVSPMTR 332 (345)
Q Consensus 315 yd~~~~~~~W~~v~~~~~ 332 (345)
||+.++ ++.....+..
T Consensus 292 w~~~~~--~~~~~~~~~~ 307 (313)
T 3odt_A 292 FSQEKS--RWASEDEIKG 307 (313)
T ss_dssp EESCGG--GCCC------
T ss_pred EeCCCC--ceeehhhhhh
Confidence 999988 7766555443
No 72
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.00 E-value=0.15 Score=44.19 Aligned_cols=214 Identities=9% Similarity=0.048 Sum_probs=111.0
Q ss_pred eEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCC--cccCC
Q 019186 68 LWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQ--WSPRA 144 (345)
Q Consensus 68 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~ 144 (345)
.+..+|+.+++.......... ..-.++++. ++.||+.... ...+.+||+..+. -..+.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~---~~p~gia~d~~g~l~v~d~~----------------~~~v~~~~~~g~~~~~~~~~ 130 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLF---YLPHGLSIDTDGNYWVTDVA----------------LHQVFKLDPHSKEGPLLILG 130 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTC---SSEEEEEECTTSCEEEEETT----------------TTEEEEECTTCSSCCSEEES
T ss_pred cEEEEECCCCeEEeccCCCcc---CCceEEEECCCCCEEEEECC----------------CCEEEEEeCCCCeEEEEEec
Confidence 689999988775432111110 112234444 6779988653 3568999986552 12221
Q ss_pred CC------CCCc-eeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCC-------CccCCCceeEEEE-
Q 019186 145 SM------LVPR-AMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDL-------HRTHNSACTGVVI- 207 (345)
Q Consensus 145 ~~------~~~r-~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~-------~~~~~~~~~~~~~- 207 (345)
.. .... .-.++++. ++.+|+..+.. ...+.+||+....-..+... +.. ......+.+
T Consensus 131 ~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~-~~~p~gia~d 204 (329)
T 3fvz_A 131 RSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQ-FSVPHSLALV 204 (329)
T ss_dssp BTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTE-ESCEEEEEEE
T ss_pred ccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcc-cCCCcEEEEE
Confidence 10 0111 12344444 68999997532 24689999655433333211 111 122333333
Q ss_pred -C-CEEEEEecCcceEEEEECCCCCeeeccCCC-C---CCceEEEcCeEEEEeC---------cEEEEecCCc---eEEe
Q 019186 208 -G-GKVHVLHKGLSTVQVLDHMGLGWTVEDYGW-L---QGPMAIVHDSVYLMSH---------GLIIKQHRDV---RKVV 269 (345)
Q Consensus 208 -~-~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~-~---~~~~~~~~~~l~~~~~---------~~i~~~d~~~---W~~~ 269 (345)
+ +.||+.......|.+||+.+++....-... . ...++...+.+|...+ ..+..++..+ -..+
T Consensus 205 ~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 205 PHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 4 899999877788999999877664331111 1 1122222344454444 4677777655 2222
Q ss_pred ccchhhcccceeEEEEE-CCeEEEEcceecCCCCcccccccCceeeeccCC
Q 019186 270 ASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 319 (345)
Q Consensus 270 ~~~p~~~~r~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~ 319 (345)
...+. ......+++.- ++.||+....+ +.|.+|+++.
T Consensus 285 ~~~~~-~~~~p~~ia~~~dG~lyvad~~~------------~~I~~~~~~~ 322 (329)
T 3fvz_A 285 KPVRK-HFDMPHDIVASEDGTVYIGDAHT------------NTVWKFTLTE 322 (329)
T ss_dssp CCSSS-CCSSEEEEEECTTSEEEEEESSS------------CCEEEEEEEE
T ss_pred cCCCC-ccCCeeEEEECCCCCEEEEECCC------------CEEEEEeCCc
Confidence 21111 11223444433 56888875422 3678888754
No 73
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.99 E-value=0.12 Score=50.63 Aligned_cols=184 Identities=7% Similarity=-0.017 Sum_probs=106.1
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.|++.. ....++.||+.+++++........ ...-.+++.. ++.|++... ..+++|
T Consensus 417 ~g~lWigt--~~~Gl~~~~~~~~~~~~~~~~~~~--~~~v~~i~~d~~g~lwigt~------------------~Gl~~~ 474 (781)
T 3v9f_A 417 EGNLWFGT--YLGNISYYNTRLKKFQIIELEKNE--LLDVRVFYEDKNKKIWIGTH------------------AGVFVI 474 (781)
T ss_dssp TSCEEEEE--TTEEEEEECSSSCEEEECCSTTTC--CCCEEEEEECTTSEEEEEET------------------TEEEEE
T ss_pred CCCEEEEe--ccCCEEEEcCCCCcEEEeccCCCC--CCeEEEEEECCCCCEEEEEC------------------CceEEE
Confidence 44555532 235688999999988887532111 1222334443 567777542 358999
Q ss_pred eCCCCCcccCCCCC---C-CceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-
Q 019186 134 DPVTRQWSPRASML---V-PRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI- 207 (345)
Q Consensus 134 d~~t~~W~~~~~~~---~-~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~- 207 (345)
|+.+++|+...... . ...-.+++. -++.|++... . .-+..||+++++++.......-.......+..
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d 547 (781)
T 3v9f_A 475 DLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRS 547 (781)
T ss_dssp ESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEEC
T ss_pred eCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEEC
Confidence 99998887654322 0 111122222 2567766532 1 12788999998887664311100111122222
Q ss_pred -CCEEEEEecCcceE-EEEECCCCCeeeccCC---CC--CCceEE-EcCeEEEEeCcEEEEecCCc--eEEe
Q 019186 208 -GGKVHVLHKGLSTV-QVLDHMGLGWTVEDYG---WL--QGPMAI-VHDSVYLMSHGLIIKQHRDV--RKVV 269 (345)
Q Consensus 208 -~~~iyv~gG~~~~i-~~yd~~~~~W~~~~~~---~~--~~~~~~-~~~~l~~~~~~~i~~~d~~~--W~~~ 269 (345)
++.|++.. ...+ .+||+++++++..... +. ..+++. -+|.|++.....+..|++++ ++..
T Consensus 548 ~~g~lWi~T--~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 548 SKGQMWLAT--GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTY 617 (781)
T ss_dssp TTSCEEEEE--TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTEEEEE
T ss_pred CCCCEEEEE--CCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCceEEe
Confidence 57788765 2557 9999999988765321 11 122222 26789988888899999986 5544
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.018 Score=51.24 Aligned_cols=127 Identities=6% Similarity=-0.065 Sum_probs=63.1
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceE-eCCCCCccCCCceeEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-PIPDLHRTHNSACTGV 205 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~~~ 205 (345)
..+.+||..+++-...-. .....-.+++.. ++..++.++.++ .+.+||..+.+-. .+... . ....++.
T Consensus 227 g~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~--~-~~i~~~~ 296 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLI-GHHGPISVLEFNDTNKLLLSASDDG------TLRIWHGGNGNSQNCFYGH--S-QSIVSAS 296 (425)
T ss_dssp GCEEEEETTCSSCSEEEC-CCSSCEEEEEEETTTTEEEEEETTS------CEEEECSSSBSCSEEECCC--S-SCEEEEE
T ss_pred CeEEEEEcCCCceeeeec-cCCCceEEEEECCCCCEEEEEcCCC------EEEEEECCCCccceEecCC--C-ccEEEEE
Confidence 468899998764221111 111111223332 566666665442 4889998775422 11111 1 1122333
Q ss_pred EE-CCEEEEEecCcceEEEEECCCCCeeeccCC-CCC-CceEE-EcCeEEEEeC--cEEEEecCCc
Q 019186 206 VI-GGKVHVLHKGLSTVQVLDHMGLGWTVEDYG-WLQ-GPMAI-VHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 206 ~~-~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~-~~~-~~~~~-~~~~l~~~~~--~~i~~~d~~~ 265 (345)
.. ++ +++.++....+..||..+.+-...-.. ... ..++. .++.+++.++ +.+..||..+
T Consensus 297 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 297 WVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred ECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 33 55 666666778899999987653322111 111 11111 2455555554 6777777655
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.97 E-value=0.028 Score=55.12 Aligned_cols=222 Identities=8% Similarity=-0.028 Sum_probs=111.0
Q ss_pred EEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeC
Q 019186 57 LLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDP 135 (345)
Q Consensus 57 ~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~ 135 (345)
.+++.|+ ....+.+||..+++....-.... ..-.+++.. ++..++.|+. ...+.+||.
T Consensus 26 ~~la~~~-~~g~v~iwd~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~----------------dg~i~vw~~ 84 (814)
T 3mkq_A 26 PWVLTTL-YSGRVEIWNYETQVEVRSIQVTE----TPVRAGKFIARKNWIIVGSD----------------DFRIRVFNY 84 (814)
T ss_dssp SEEEEEE-TTSEEEEEETTTTEEEEEEECCS----SCEEEEEEEGGGTEEEEEET----------------TSEEEEEET
T ss_pred CEEEEEe-CCCEEEEEECCCCceEEEEecCC----CcEEEEEEeCCCCEEEEEeC----------------CCeEEEEEC
Confidence 3344443 24578999988775433211111 122233333 5566666664 246889998
Q ss_pred CCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCC-ceEeCCCCCccCCCceeEEEE--CCEE
Q 019186 136 VTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKD-VWVPIPDLHRTHNSACTGVVI--GGKV 211 (345)
Q Consensus 136 ~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~--~~~i 211 (345)
.+++....-.. ....-.+++.. ++..++.|+.+ ..+.+||..++ ..... +......-.++... ++.+
T Consensus 85 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 85 NTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQT--FEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp TTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEE--EECCSSCEEEEEEETTEEEE
T ss_pred CCCcEEEEEec-CCCCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEE--EcCCCCcEEEEEEEcCCCCE
Confidence 87764322110 11111222222 55555555533 34889998765 22211 11110112223333 4567
Q ss_pred EEEecCcceEEEEECCCCCe--eeccCCCCCCceEEE----cCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEE
Q 019186 212 HVLHKGLSTVQVLDHMGLGW--TVEDYGWLQGPMAIV----HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAM 283 (345)
Q Consensus 212 yv~gG~~~~i~~yd~~~~~W--~~~~~~~~~~~~~~~----~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~ 283 (345)
+++++....+..||..+..- ............... ++.+++.++ +.+..+|..+.+.+..+...........
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~ 235 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 77776778899999875532 222211111222222 666666666 7888888877444433321111122222
Q ss_pred EEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 284 IGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 284 ~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
..-++.+++.|+.++ .|.+||+.+.
T Consensus 236 ~~~~~~~l~~~~~dg------------~v~vwd~~~~ 260 (814)
T 3mkq_A 236 FHPTLPIIISGSEDG------------TLKIWNSSTY 260 (814)
T ss_dssp ECSSSSEEEEEETTS------------CEEEEETTTC
T ss_pred EcCCCCEEEEEeCCC------------eEEEEECCCC
Confidence 223566777776432 5778888765
No 76
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.95 E-value=0.14 Score=43.04 Aligned_cols=206 Identities=6% Similarity=-0.055 Sum_probs=111.2
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+... ....+..||+. ++.......... ..-.+++.. ++.+|+.... ...+++|
T Consensus 25 ~g~l~v~~~-~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~----------------~~~i~~~ 83 (299)
T 2z2n_A 25 KGKVWITQH-KANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEVWFTENA----------------ANKIGRI 83 (299)
T ss_dssp TSCEEEEET-TTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCEEEEETT----------------TTEEEEE
T ss_pred CCCEEEEec-CCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCEEEeCCC----------------CCeEEEE
Confidence 556776542 24678999998 777665421111 222344443 6788887542 2358889
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGK 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ 210 (345)
|+. ++.+..........-.+++.. ++.+|+.... ...+..||+ +.+...... +.. ......+.. ++.
T Consensus 84 ~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~-~~~-~~~~~~i~~~~~g~ 153 (299)
T 2z2n_A 84 TKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYEL-PNK-GSYPSFITLGSDNA 153 (299)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEEC-SST-TCCEEEEEECTTSC
T ss_pred CCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEecC-CCC-CCCCceEEEcCCCC
Confidence 886 444433211111222334443 5788887532 235888998 555544321 111 112223333 578
Q ss_pred EEEEecCcceEEEEECCCCCeeeccC--CCC-CCceEE-EcCeEEEEeC--cEEEEecCCc-eEEeccchhhcccceeEE
Q 019186 211 VHVLHKGLSTVQVLDHMGLGWTVEDY--GWL-QGPMAI-VHDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFAM 283 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~W~~~~~--~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~-W~~~~~~p~~~~r~~~~~ 283 (345)
+|+.......+.+||+ +++...... ... ...++. .+|.+|+... ..+..+|+.. .+... .+.... ...++
T Consensus 154 l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~-~~~~~~-~~~~i 230 (299)
T 2z2n_A 154 LWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFK-IPTPNA-RPHAI 230 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEE-CSSTTC-CEEEE
T ss_pred EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEE-CCCCCC-CceeE
Confidence 9987644578999999 777765421 111 222333 2578999874 7899999833 44432 111111 22344
Q ss_pred EEE-CCeEEEEc
Q 019186 284 IGM-GDDIYVIG 294 (345)
Q Consensus 284 ~~~-~~~l~i~G 294 (345)
+.- ++.+|+..
T Consensus 231 ~~~~~g~l~v~~ 242 (299)
T 2z2n_A 231 TAGAGIDLWFTE 242 (299)
T ss_dssp EECSTTCEEEEE
T ss_pred EECCCCCEEEec
Confidence 333 56788764
No 77
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.93 E-value=0.099 Score=51.30 Aligned_cols=225 Identities=7% Similarity=-0.041 Sum_probs=124.0
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.|++... ...+..||+.++++..... +.......-.+++.. ++.|++.. . ...+++|
T Consensus 373 ~g~lWigt~--~~Gl~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~lWigt-~----------------~~Gl~~~ 432 (781)
T 3v9f_A 373 QGKLWIGTD--GGGINVFENGKRVAIYNKE-NRELLSNSVLCSLKDSEGNLWFGT-Y----------------LGNISYY 432 (781)
T ss_dssp TSCEEEEEB--SSCEEEEETTEEEEECC------CCCSBEEEEEECTTSCEEEEE-T----------------TEEEEEE
T ss_pred CCCEEEEeC--CCcEEEEECCCCeEEEccC-CCCCCCcceEEEEECCCCCEEEEe-c----------------cCCEEEE
Confidence 345665431 2457889998877766531 111111223344443 57788742 1 2468999
Q ss_pred eCCCCCcccCCCCC-CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCc-cC-CCceeEEEE--
Q 019186 134 DPVTRQWSPRASML-VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHR-TH-NSACTGVVI-- 207 (345)
Q Consensus 134 d~~t~~W~~~~~~~-~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~-~~-~~~~~~~~~-- 207 (345)
|+.+++++...... ....-.+++.- ++.|++... .-+..||+.+++|+....... .. ......+..
T Consensus 433 ~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 504 (781)
T 3v9f_A 433 NTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS 504 (781)
T ss_dssp CSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT
T ss_pred cCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEEEEEcC
Confidence 99999887765321 11122233333 567766532 238999999988876533221 00 111122222
Q ss_pred CCEEEEEecCcceEEEEECCCCCeeeccCCCC---CC--ceEE-EcCeEEEEeCcEE-EEecCCc--eEEecc---chhh
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL---QG--PMAI-VHDSVYLMSHGLI-IKQHRDV--RKVVAS---ASEF 275 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~---~~--~~~~-~~~~l~~~~~~~i-~~~d~~~--W~~~~~---~p~~ 275 (345)
++.|++.. ....+.+||+.+++++....... .. .++. .+|.|++-....+ +.||+++ ++.... +|
T Consensus 505 ~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~~~~~~~~~gl~-- 581 (781)
T 3v9f_A 505 EGRFWIGT-FGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFDYQVFQRKEGLP-- 581 (781)
T ss_dssp TCCEEEEE-SSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCCCEEECGGGTCS--
T ss_pred CCCEEEEE-cCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCcEEEccccCCCC--
Confidence 56787754 23568999999998877643111 11 1222 2678888777666 9999876 555432 33
Q ss_pred cccceeEEEEE-CCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 276 RRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 276 ~~r~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
.... .+++.- ++.|++.+. +-+.+|||++. +++..
T Consensus 582 ~~~i-~~i~~d~~g~lW~~t~--------------~Gl~~~~~~~~--~~~~~ 617 (781)
T 3v9f_A 582 NTHI-RAISEDKNGNIWASTN--------------TGISCYITSKK--CFYTY 617 (781)
T ss_dssp CCCC-CEEEECSSSCEEEECS--------------SCEEEEETTTT--EEEEE
T ss_pred CceE-EEEEECCCCCEEEEcC--------------CceEEEECCCC--ceEEe
Confidence 1122 344333 577887642 13677888877 66665
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.92 E-value=0.072 Score=46.23 Aligned_cols=149 Identities=10% Similarity=0.027 Sum_probs=76.0
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCE-EeCCCCCccccccceeEEEEE-C----CEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLW-ITLPVLPSKIRHLAHFGVVST-A----GKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~-~----~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
...+++.++. ..+.+||..+++. ..+.....+.....-.+++.. + +.+++.|+. ..
T Consensus 34 ~~~~~~~~~~--~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----------------dg 95 (366)
T 3k26_A 34 DPLVFATVGS--NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS----------------RG 95 (366)
T ss_dssp SCEEEEEEET--TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET----------------TC
T ss_pred CceEEEECCC--CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC----------------CC
Confidence 3445555543 3788999886543 222211110000122233333 3 467777764 24
Q ss_pred ceEEEeCCCCCcccCCCCC-CCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEe-CCCCCccCCCceeE
Q 019186 129 EVWSYDPVTRQWSPRASML-VPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVP-IPDLHRTHNSACTG 204 (345)
Q Consensus 129 ~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~ 204 (345)
.+.+||..+.+-.. .+. ....-.+++.. ++.+++.|+.++ .+.+||..+.+-.. +..+... ......
T Consensus 96 ~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~-~~~v~~ 166 (366)
T 3k26_A 96 IIRIINPITMQCIK--HYVGHGNAINELKFHPRDPNLLLSVSKDH------ALRLWNIQTDTLVAIFGGVEGH-RDEVLS 166 (366)
T ss_dssp EEEEECTTTCCEEE--EEESCCSCEEEEEECSSCTTEEEEEETTS------CEEEEETTTTEEEEEECSTTSC-SSCEEE
T ss_pred EEEEEEchhceEee--eecCCCCcEEEEEECCCCCCEEEEEeCCC------eEEEEEeecCeEEEEecccccc-cCceeE
Confidence 68889987764221 111 11111222222 566777776543 48999998876432 2222222 222222
Q ss_pred EEE--CCEEEEEecCcceEEEEECCCCC
Q 019186 205 VVI--GGKVHVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 205 ~~~--~~~iyv~gG~~~~i~~yd~~~~~ 230 (345)
+.. ++..++.|+....+..||+.+.+
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 332 45566666667789999987653
No 79
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.91 E-value=0.024 Score=49.45 Aligned_cols=160 Identities=9% Similarity=0.020 Sum_probs=81.0
Q ss_pred CceEEEeCCCCCcccCCCCCCCc-eeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPR-AMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV 205 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r-~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~ 205 (345)
..+.+||..+++-... +.... .-.+++.. ++.+++.|+.++ .+.+||..+..-... +... ......+
T Consensus 164 ~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~------~v~~wd~~~~~~~~~--~~~h-~~~v~~v 232 (340)
T 1got_B 164 TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA------SAKLWDVREGMCRQT--FTGH-ESDINAI 232 (340)
T ss_dssp SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCSEEEE--ECCC-SSCEEEE
T ss_pred CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC------cEEEEECCCCeeEEE--EcCC-cCCEEEE
Confidence 4688899887653221 11111 11222222 567777776553 488999887653221 1111 1112222
Q ss_pred EE--CCEEEEEecCcceEEEEECCCCCeeec-cCCCCCCce---EE-EcCeEEEEeC--cEEEEecCCceEEeccchhhc
Q 019186 206 VI--GGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPM---AI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFR 276 (345)
Q Consensus 206 ~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~~~~~---~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~ 276 (345)
.. ++.+++.|+....+..||..+++-... ........+ +. .++.+++.++ +.+..+|..+.+.+..+....
T Consensus 233 ~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~ 312 (340)
T 1got_B 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD 312 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCC
Confidence 22 567777777777899999987653221 111111111 11 2566666665 788888877654444333111
Q ss_pred ccceeEEEEECCeEEEEcceec
Q 019186 277 RRIGFAMIGMGDDIYVIGGVIG 298 (345)
Q Consensus 277 ~r~~~~~~~~~~~l~i~GG~~~ 298 (345)
.........-++..++.|+.++
T Consensus 313 ~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 313 NRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp SCEEEEEECTTSSCEEEEETTS
T ss_pred CcEEEEEEcCCCCEEEEEcCCc
Confidence 2222222223566777776443
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.90 E-value=0.11 Score=46.63 Aligned_cols=136 Identities=14% Similarity=0.069 Sum_probs=72.7
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
.+.++++|..+++...+-.+... ...-.+++.. ++..++.|+. ...+.+||..+++-...
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasgs~----------------Dg~v~iWd~~~~~~~~~- 184 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTS----------------SAEVQLWDVQQQKRLRN- 184 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEET----------------TSCEEEEETTTTEEEEE-
T ss_pred CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEEEC----------------CCeEEEEEcCCCcEEEE-
Confidence 46899999999987655433322 0122234433 5677777764 24688999987753221
Q ss_pred CCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE--EECCEEEEEecCcceEE
Q 019186 145 SMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV--VIGGKVHVLHKGLSTVQ 222 (345)
Q Consensus 145 ~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~~iyv~gG~~~~i~ 222 (345)
+............++.+.+.|+.+ ..+..+|......... .+... ....... ..++...+.++..+.+.
T Consensus 185 -~~~h~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~-~~~~h-~~~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 185 -MTSHSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVA-TLSGH-SQEVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp -ECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEE-EEECC-SSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred -EeCCCCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeE-Eeccc-ccceeeeeecCCCCeeeeeeccccce
Confidence 121122223344567777776654 3477777665432211 11111 1111122 22455666666667788
Q ss_pred EEECCCC
Q 019186 223 VLDHMGL 229 (345)
Q Consensus 223 ~yd~~~~ 229 (345)
.+|..++
T Consensus 256 i~~~~~~ 262 (420)
T 4gga_A 256 VWPSAPG 262 (420)
T ss_dssp EEESSCC
T ss_pred EEeeccc
Confidence 8887654
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.048 Score=47.64 Aligned_cols=95 Identities=8% Similarity=0.107 Sum_probs=55.2
Q ss_pred CceEEEeCCCCCcccCCCCCCCcee-eeeeEe-C--CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAM-FACCAL-K--EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT 203 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~-~~~~~~-~--~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 203 (345)
..+.+||...+++..+..+...... .+++.. + +.+++.|+.++ .+.+||..+.+|..+..+... .....
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~-~~~v~ 105 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVH-SASVN 105 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEE
T ss_pred CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC------EEEEEEcCCCceeEeeeecCC-CcceE
Confidence 3577888776555544333322222 223332 2 56667766543 489999999887665444433 22222
Q ss_pred EEEE--C--CEEEEEecCcceEEEEECCCC
Q 019186 204 GVVI--G--GKVHVLHKGLSTVQVLDHMGL 229 (345)
Q Consensus 204 ~~~~--~--~~iyv~gG~~~~i~~yd~~~~ 229 (345)
.+.. + +.++++++....+..||..+.
T Consensus 106 ~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 106 SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 3333 3 556677767788999998876
No 82
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.87 E-value=0.12 Score=45.49 Aligned_cols=225 Identities=12% Similarity=0.038 Sum_probs=103.8
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+++.+. ...+.++|..+++-..............-.+++.. +++.++.|+. ...+.+|
T Consensus 105 d~~~l~~s~--dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~----------------dg~v~iw 166 (357)
T 4g56_B 105 EKGILVASD--SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK----------------DFSVKVW 166 (357)
T ss_dssp TTEEEEEET--TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET----------------TSCEEEE
T ss_pred CCCEEEEEC--CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC----------------CCeEEEE
Confidence 344444333 35688888877653322211110000112234433 5667777764 2458889
Q ss_pred eCCCCCcccCCCCCCCc-eeeeeeEe-C-CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE---
Q 019186 134 DPVTRQWSPRASMLVPR-AMFACCAL-K-EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--- 207 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r-~~~~~~~~-~-~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--- 207 (345)
|..+++-... +.... .-.+++.. + +.+++.++.++ .+.+||.++.+-......... ......+..
T Consensus 167 d~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~~s~~~dg------~v~~wd~~~~~~~~~~~~~~~-~~~v~~v~~sp~ 237 (357)
T 4g56_B 167 DLSQKAVLKS--YNAHSSEVNCVAACPGKDTIFLSCGEDG------RILLWDTRKPKPATRIDFCAS-DTIPTSVTWHPE 237 (357)
T ss_dssp ETTTTEEEEE--ECCCSSCEEEEEECTTCSSCEEEEETTS------CEEECCTTSSSCBCBCCCTTC-CSCEEEEEECTT
T ss_pred ECCCCcEEEE--EcCCCCCEEEEEEccCCCceeeeeccCC------ceEEEECCCCceeeeeeeccc-cccccchhhhhc
Confidence 9987653221 11111 11222222 2 34666666443 388899887654322222222 122222332
Q ss_pred CCEEEEEecCcceEEEEECCCCCeee-ccCCCCC-CceEE-EcC-eEEEEeC--cEEEEecCCceEEeccchhhccccee
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQ-GPMAI-VHD-SVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGF 281 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~~W~~-~~~~~~~-~~~~~-~~~-~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~ 281 (345)
++.+++.|+....+..||+.+.+-.. ....... ..++. .++ ++++.++ +.|..+|.++-+.+..+. -.... .
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~-H~~~V-~ 315 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS-HRDFV-T 315 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC-CSSCE-E
T ss_pred ccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC-CCCCE-E
Confidence 35677777667789999987764321 2111111 11222 234 4444443 678888887744333221 01111 2
Q ss_pred EEEE--ECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 282 AMIG--MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 282 ~~~~--~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+++. .++++++.||.++ .|.+||+.+.
T Consensus 316 ~vafsP~d~~~l~s~s~Dg------------~v~iW~~~~~ 344 (357)
T 4g56_B 316 GVAWSPLDHSKFTTVGWDH------------KVLHHHLPSE 344 (357)
T ss_dssp EEEECSSSTTEEEEEETTS------------CEEEEECC--
T ss_pred EEEEeCCCCCEEEEEcCCC------------eEEEEECCCC
Confidence 2332 2677888887554 4778887553
No 83
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.87 E-value=0.029 Score=48.88 Aligned_cols=195 Identities=9% Similarity=-0.032 Sum_probs=93.7
Q ss_pred CcEEEEEec-CCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCE-EEEEcCCCCCCCCCCCCCCCCcCcCceE
Q 019186 55 ENLLCVCAF-DPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGK-LFVLGGGSDAVDPLTGDQDGSFATNEVW 131 (345)
Q Consensus 55 ~~~l~v~gg-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~~ 131 (345)
++.+|+.+. .....+++||..+++++.+...... ...-..++.. +++ ||+.+.. ...+.
T Consensus 50 dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~--~~~p~~~a~spdg~~l~~~~~~----------------~~~v~ 111 (347)
T 3hfq_A 50 KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAP--GTPPAYVAVDEARQLVYSANYH----------------KGTAE 111 (347)
T ss_dssp TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE--SCCCSEEEEETTTTEEEEEETT----------------TTEEE
T ss_pred CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecC--CCCCEEEEECCCCCEEEEEeCC----------------CCEEE
Confidence 445777764 2346889999988887766543221 0111223333 444 6666532 23566
Q ss_pred EEeCC-CCCcccCCCC------CCCc----eeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCC-CCceEeCCCCCccC
Q 019186 132 SYDPV-TRQWSPRASM------LVPR----AMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPE-KDVWVPIPDLHRTH 198 (345)
Q Consensus 132 ~yd~~-t~~W~~~~~~------~~~r----~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~-~~~W~~~~~~~~~~ 198 (345)
+|+.. +++.+.+... +..| .-+.++.. ++++|+.+.. ...+.+||.. +.+...+.......
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~------~~~v~~~~~~~~g~~~~~~~~~~~~ 185 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG------SDKVYVYNVSDAGQLSEQSVLTMEA 185 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT------TTEEEEEEECTTSCEEEEEEEECCT
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC------CCEEEEEEECCCCcEEEeeeEEcCC
Confidence 77764 2232222111 1111 11223332 6677766432 2468899987 45554332111110
Q ss_pred CCceeEEE--ECCE-EEEEecCcceEEEEECC--CCCeeeccC---CCC-------CCceEE-EcCe-EEEEeC--cEEE
Q 019186 199 NSACTGVV--IGGK-VHVLHKGLSTVQVLDHM--GLGWTVEDY---GWL-------QGPMAI-VHDS-VYLMSH--GLII 259 (345)
Q Consensus 199 ~~~~~~~~--~~~~-iyv~gG~~~~i~~yd~~--~~~W~~~~~---~~~-------~~~~~~-~~~~-l~~~~~--~~i~ 259 (345)
......+. -+++ +|+.+.....+..|+.. ++++..+.. .+. ...++. .+|+ ||+.+. +.+.
T Consensus 186 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~ 265 (347)
T 3hfq_A 186 GFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLA 265 (347)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEE
T ss_pred CCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEE
Confidence 11112222 2454 88876545666666654 466543321 111 111222 3554 766654 6777
Q ss_pred EecCC---ceEEeccch
Q 019186 260 KQHRD---VRKVVASAS 273 (345)
Q Consensus 260 ~~d~~---~W~~~~~~p 273 (345)
.|+.+ +.+.+..++
T Consensus 266 v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 266 VFAVTADGHLTLIQQIS 282 (347)
T ss_dssp EEEECGGGCEEEEEEEE
T ss_pred EEEECCCCcEEEeEEEe
Confidence 77754 355555544
No 84
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.87 E-value=0.11 Score=44.21 Aligned_cols=228 Identities=8% Similarity=-0.081 Sum_probs=116.8
Q ss_pred CcEEEEEe------cCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-C-CEEEEEcCCCCCCCCCCCCCCCCcC
Q 019186 55 ENLLCVCA------FDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-A-GKLFVLGGGSDAVDPLTGDQDGSFA 126 (345)
Q Consensus 55 ~~~l~v~g------g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~~~ 126 (345)
++.+|+.. +.....+..||+.++++..+...........-.+++.. + +.+|+....
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~---------------- 91 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR---------------- 91 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----------------
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC----------------
Confidence 55677761 11245799999999988765431000000122344443 4 788887642
Q ss_pred cCceEEEeCCCCCcccC-CCCCC--C-ceeeeeeE-eCCeEEEEcCcC---------CCCCCCceEEEEeCCCCceEeCC
Q 019186 127 TNEVWSYDPVTRQWSPR-ASMLV--P-RAMFACCA-LKEKIVVAGGFT---------SCRKSISQAEMYDPEKDVWVPIP 192 (345)
Q Consensus 127 ~~~~~~yd~~t~~W~~~-~~~~~--~-r~~~~~~~-~~~~iyv~gG~~---------~~~~~~~~v~~yd~~~~~W~~~~ 192 (345)
..+++||+. ++.+.+ ..... . ..-..++. -++.+|+..... ........++.||+. .+...+.
T Consensus 92 -~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 92 -LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp -TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred -CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 268899998 766544 22111 1 11123333 267888775432 011123568889887 5544331
Q ss_pred CCCccCCCceeEEEE-----CC-EEEEEecCcceEEEEECC-CCCe------eeccCCC-C-CCceEE-EcCeEEEEe--
Q 019186 193 DLHRTHNSACTGVVI-----GG-KVHVLHKGLSTVQVLDHM-GLGW------TVEDYGW-L-QGPMAI-VHDSVYLMS-- 254 (345)
Q Consensus 193 ~~~~~~~~~~~~~~~-----~~-~iyv~gG~~~~i~~yd~~-~~~W------~~~~~~~-~-~~~~~~-~~~~l~~~~-- 254 (345)
. .. ......+.. ++ .+|+.......+.+||++ +++. ...+... . ...++. -+|.+|+..
T Consensus 169 ~--~~-~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 169 T--AF-QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp E--EE-SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred c--CC-CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 1 11 111223333 34 578876456789999876 4432 2222111 1 112222 367888885
Q ss_pred CcEEEEecCCc--e-EEeccchhhcccceeEEEE-ECCe-EEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 255 HGLIIKQHRDV--R-KVVASASEFRRRIGFAMIG-MGDD-IYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 255 ~~~i~~~d~~~--W-~~~~~~p~~~~r~~~~~~~-~~~~-l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
...+..||+++ . ..+ ..+ . ....+++. -+++ ||+.+... ..+++|++...
T Consensus 246 ~~~i~~~d~~~g~~~~~~-~~~--~-~~~~~i~~~~dg~~l~v~~~~~------------~~l~~~~~~~~ 300 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRI-RCP--F-EKPSNLHFKPQTKTIFVTEHEN------------NAVWKFEWQRN 300 (314)
T ss_dssp TTEEEEECTTCBSCSEEE-ECS--S-SCEEEEEECTTSSEEEEEETTT------------TEEEEEECSSC
T ss_pred CCEEEEEcCCCCcEeEEE-eCC--C-CCceeEEECCCCCEEEEEeCCC------------CeEEEEeCCCC
Confidence 37899999884 2 222 122 1 22233332 2455 77754311 26788888764
No 85
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.86 E-value=0.064 Score=48.17 Aligned_cols=136 Identities=11% Similarity=0.031 Sum_probs=70.5
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
...+.++|..+++.... +... ...-.+++.. ++.+++.|+.+ ..+.+||..+.+- +.
T Consensus 129 Dg~i~vwd~~~~~~~~~--l~~h--~~~V~~v~~~~~~~~l~sgs~D----------------~~i~iwd~~~~~~--~~ 186 (410)
T 1vyh_C 129 DATIKVWDYETGDFERT--LKGH--TDSVQDISFDHSGKLLASCSAD----------------MTIKLWDFQGFEC--IR 186 (410)
T ss_dssp SSCEEEEETTTCCCCEE--ECCC--SSCEEEEEECTTSSEEEEEETT----------------SCCCEEETTSSCE--EE
T ss_pred CCeEEEEECCCCcEEEE--Eecc--CCcEEEEEEcCCCCEEEEEeCC----------------CeEEEEeCCCCce--eE
Confidence 35788899887653221 1111 0112233333 56677777653 3567788866542 22
Q ss_pred CCCCCce-eeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE--ECCEEEEEecCcce
Q 019186 145 SMLVPRA-MFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLHKGLST 220 (345)
Q Consensus 145 ~~~~~r~-~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~~iyv~gG~~~~ 220 (345)
.+..... -.+++.. ++..++.|+.+ ..+.+||..+..-... +... ......+. -++.+++.|+....
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~--~~~h-~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKT--FTGH-REWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEE--EECC-SSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEE--EeCC-CccEEEEEECCCCCEEEEEcCCCe
Confidence 2221111 1222222 55666666654 3588999887753221 1111 11112222 25667777777778
Q ss_pred EEEEECCCCCee
Q 019186 221 VQVLDHMGLGWT 232 (345)
Q Consensus 221 i~~yd~~~~~W~ 232 (345)
+..||..+....
T Consensus 258 v~vwd~~~~~~~ 269 (410)
T 1vyh_C 258 VRVWVVATKECK 269 (410)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCcee
Confidence 889998776543
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.84 E-value=0.1 Score=46.45 Aligned_cols=182 Identities=7% Similarity=-0.019 Sum_probs=93.0
Q ss_pred EEEecCCCCeEEEEeCCCCC-E-EeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 59 CVCAFDPENLWQLYDPLRDL-W-ITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 59 ~v~gg~~~~~~~~yd~~~~~-W-~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
++..+.....+.++|..... . ..+..+... ...-.+++.. ++.+++.|+. ...+.+||
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~~~~~l~s~s~----------------dg~v~vw~ 110 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGH--TAPVLDIAWCPHNDNVIASGSE----------------DCTVMVWE 110 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCC--SSCEEEEEECTTCTTEEEEEET----------------TSEEEEEE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecC--CCCEEEEEeCCCCCCEEEEEeC----------------CCeEEEEE
Confidence 33334445678899875432 1 011111111 0112234443 4667777764 24688899
Q ss_pred CCCCCccc-----CCCCCCCc-eeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE
Q 019186 135 PVTRQWSP-----RASMLVPR-AMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV 206 (345)
Q Consensus 135 ~~t~~W~~-----~~~~~~~r-~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 206 (345)
..++.... +..+.... .-.+++.. ++ .+++.|+.++ .+.+||..+.+....-..... ......+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~ 183 (402)
T 2aq5_A 111 IPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN------VILVWDVGTGAAVLTLGPDVH-PDTIYSVD 183 (402)
T ss_dssp CCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS------CEEEEETTTTEEEEEECTTTC-CSCEEEEE
T ss_pred ccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC------EEEEEECCCCCccEEEecCCC-CCceEEEE
Confidence 88875432 11111111 11222222 33 5666666543 489999988765422110111 11222233
Q ss_pred E--CCEEEEEecCcceEEEEECCCCCeeecc-CCCC---CCceE-EEcCeEEEEe---C--cEEEEecCCc
Q 019186 207 I--GGKVHVLHKGLSTVQVLDHMGLGWTVED-YGWL---QGPMA-IVHDSVYLMS---H--GLIIKQHRDV 265 (345)
Q Consensus 207 ~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~-~~~~---~~~~~-~~~~~l~~~~---~--~~i~~~d~~~ 265 (345)
. ++.+++.|+....+..||+++++-...- .... ...++ ..++.+++.+ . +.+..+|..+
T Consensus 184 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 184 WSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred ECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence 2 5666777767788999999887543221 1111 12222 2367777776 3 7888888876
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.051 Score=48.25 Aligned_cols=223 Identities=12% Similarity=-0.034 Sum_probs=106.8
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
+.+++.|+. ...+.+||.....-..+..-. ..-.+++.. ++..++.++. ...+.+||
T Consensus 120 ~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~----------------d~~i~iwd 177 (425)
T 1r5m_A 120 GNSIVTGVE-NGELRLWNKTGALLNVLNFHR-----APIVSVKWNKDGTHIISMDV----------------ENVTILWN 177 (425)
T ss_dssp SSEEEEEET-TSCEEEEETTSCEEEEECCCC-----SCEEEEEECTTSSEEEEEET----------------TCCEEEEE
T ss_pred CCEEEEEeC-CCeEEEEeCCCCeeeeccCCC-----ccEEEEEECCCCCEEEEEec----------------CCeEEEEE
Confidence 334444432 356888885444333332211 122334443 4555556554 23578888
Q ss_pred CCCCCcccCCCCCCCc--------------eeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCC
Q 019186 135 PVTRQWSPRASMLVPR--------------AMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNS 200 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r--------------~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~ 200 (345)
..+++-...-...... ...+++...+..++.|+.++ .+.+||..+.+-... +......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~i~~~d~~~~~~~~~--~~~~~~~ 249 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKG------AIFVYQITEKTPTGK--LIGHHGP 249 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGG------CEEEEETTCSSCSEE--ECCCSSC
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCC------eEEEEEcCCCceeee--eccCCCc
Confidence 8776543211111110 02233333444566666543 489999887642211 1111011
Q ss_pred ceeEEE-ECCEEEEEecCcceEEEEECCCCCeee-ccCCCC-CCceEEE-cCeEEEEeC-cEEEEecCCceEEeccchhh
Q 019186 201 ACTGVV-IGGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWL-QGPMAIV-HDSVYLMSH-GLIIKQHRDVRKVVASASEF 275 (345)
Q Consensus 201 ~~~~~~-~~~~iyv~gG~~~~i~~yd~~~~~W~~-~~~~~~-~~~~~~~-~~~l~~~~~-~~i~~~d~~~W~~~~~~p~~ 275 (345)
-.++.. -++.+++.++....+..||..+.+-.. ...... ...++.. ++.++..+. +.+..||..+.+.+..+...
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 329 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVD 329 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECT
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccC
Confidence 122222 256666666667789999987664322 211111 1222222 443333333 78899998774444333211
Q ss_pred cccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 276 RRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 276 ~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
..........-++.++++|+.++ .|.+||..+.
T Consensus 330 ~~~i~~~~~s~~~~~l~~~~~dg------------~i~i~~~~~~ 362 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAVAFMDG------------QVNVYDLKKL 362 (425)
T ss_dssp TCCEEEEEECTTSSEEEEEETTS------------CEEEEECHHH
T ss_pred CccEEEEEEcCCCCEEEEEECCC------------eEEEEECCCC
Confidence 11121211222567777766332 5777887654
No 88
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.78 E-value=0.078 Score=46.80 Aligned_cols=214 Identities=9% Similarity=0.055 Sum_probs=103.2
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE----CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcc
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST----AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWS 141 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~ 141 (345)
...+.+||..+++-......... ..++... ++.+++.|+. ...+.+||..+.+-.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----------------~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEET-----VYSHHMSPVSTKHCLVAVGTR----------------GPKVQLCDLKSGSCS 179 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSC-----EEEEEECSSCSSCCEEEEEES----------------SSSEEEEESSSSCCC
T ss_pred CCeEEEeeCCCCccceeccCCCc-----eeeeEeecCCCCCcEEEEEcC----------------CCeEEEEeCCCccee
Confidence 45788999988765443332221 1222222 3346666654 346888998766422
Q ss_pred cCCCCCCCce-eeeeeEe-CCe-EEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCC-----------CCccCCCceeEE
Q 019186 142 PRASMLVPRA-MFACCAL-KEK-IVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPD-----------LHRTHNSACTGV 205 (345)
Q Consensus 142 ~~~~~~~~r~-~~~~~~~-~~~-iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~-----------~~~~~~~~~~~~ 205 (345)
. .+..... -.+++.. ++. +++.|+.++ .+.+||..+.. ...+.. ...........+
T Consensus 180 ~--~~~~~~~~v~~~~~~~~~~~ll~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 180 H--ILQGHRQEILAVSWSPRYDYILATASADS------RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp E--EECCCCSCEEEEEECSSCTTEEEEEETTS------CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred e--eecCCCCcEEEEEECCCCCcEEEEEcCCC------cEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 1 1111111 1222222 333 667766543 38888887653 122110 001111222223
Q ss_pred EE--CCEEEEEecCcceEEEEECCCCCeeeccCCC------CCCceEE--E-cCeE-EEEeCcEEEEecCCceEEeccch
Q 019186 206 VI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGW------LQGPMAI--V-HDSV-YLMSHGLIIKQHRDVRKVVASAS 273 (345)
Q Consensus 206 ~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~------~~~~~~~--~-~~~l-~~~~~~~i~~~d~~~W~~~~~~p 273 (345)
.. ++..++.|+....+..||+.+.+-....... ....... . ++.+ +...++.+..||..+.+.+..+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 33 5666666666778999999876532211100 0111111 1 2222 22233788888887744444333
Q ss_pred hhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 274 EFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 274 ~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
............-++++++.|+.++ .+.+||+.+.
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg------------~i~iw~~~~~ 366 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDC------------NILAWVPSLY 366 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTS------------CEEEEEECC-
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCC------------eEEEEeCCCC
Confidence 1112222222233667777777443 4677777665
No 89
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.75 E-value=0.29 Score=48.04 Aligned_cols=226 Identities=8% Similarity=0.073 Sum_probs=123.9
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCc----cccccceeEEEEE-CCE-EEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPS----KIRHLAHFGVVST-AGK-LFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~----~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
++.|++.. ...-+..||+.++++......+. ......-.+++.. ++. |+|.. . ..
T Consensus 367 ~g~lWiGt--~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt-~----------------~~ 427 (795)
T 4a2l_A 367 DKNLWIGT--NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT-H----------------AG 427 (795)
T ss_dssp TSCEEEEE--SSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-T----------------TT
T ss_pred CCCEEEEE--CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-C----------------cC
Confidence 44555533 23468899999998877653221 0011223344443 566 77643 1 23
Q ss_pred ceEEEeCCCCCcccCCC----CCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCC--CccC-CC
Q 019186 129 EVWSYDPVTRQWSPRAS----MLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDL--HRTH-NS 200 (345)
Q Consensus 129 ~~~~yd~~t~~W~~~~~----~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~--~~~~-~~ 200 (345)
.+++||+.+++++.... ++.. .-.+++.- ++.|++... . .+..||+++++|+..... +... ..
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~-~v~~i~~d~~g~lwigt~-~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNE-NVYAILPDGEGNLWLGTL-S-------ALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCS-CEEEEEECSSSCEEEEES-S-------CEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCC-eeEEEEECCCCCEEEEec-C-------ceeEEeCCCCeEEEccccccccccCCc
Confidence 58999999988766542 1111 11222222 567766542 1 289999999999877533 1110 11
Q ss_pred ceeEEEE--CCEEEEEecCcceEEEEECCCCCeeeccC------CCCCC--ceEE-EcCeEEEEeCcEEEEecCCc--eE
Q 019186 201 ACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY------GWLQG--PMAI-VHDSVYLMSHGLIIKQHRDV--RK 267 (345)
Q Consensus 201 ~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~------~~~~~--~~~~-~~~~l~~~~~~~i~~~d~~~--W~ 267 (345)
....+.. ++.|++.. . ..+.+||+.++++ .... .+... .++. .+|.|++-....++.||+++ ++
T Consensus 499 ~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~~~~~~~ 575 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFNEKDKQIK 575 (795)
T ss_dssp CEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEETTTTEEE
T ss_pred eEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCceeECCCCCcEE
Confidence 1122222 56788765 2 6799999988887 3321 11111 1222 36788887767889999876 55
Q ss_pred EeccchhhcccceeEEEEE-CCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 268 VVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 268 ~~~~~p~~~~r~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
............-.+++.- ++.|++.+. +-+..||++++ +++..
T Consensus 576 ~~~~~~gl~~~~i~~i~~d~~g~lWi~t~--------------~Gl~~~~~~~~--~~~~~ 620 (795)
T 4a2l_A 576 RYNTTNGLPNNVVYGILEDSFGRLWLSTN--------------RGISCFNPETE--KFRNF 620 (795)
T ss_dssp EECGGGTCSCSCEEEEEECTTSCEEEEET--------------TEEEEEETTTT--EEEEE
T ss_pred EeCCCCCCchhheEEEEECCCCCEEEEcC--------------CceEEEcCCCC--cEEEc
Confidence 5432111011122333332 567887653 14567888877 77665
No 90
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.74 E-value=0.037 Score=48.94 Aligned_cols=191 Identities=6% Similarity=-0.052 Sum_probs=92.2
Q ss_pred EEEEEecCCCCeEEEEeCCCCC------EEeCCCCCccccccceeEEEEE-----CCEE-EEEcCCCCCCCCCCCCCCCC
Q 019186 57 LLCVCAFDPENLWQLYDPLRDL------WITLPVLPSKIRHLAHFGVVST-----AGKL-FVLGGGSDAVDPLTGDQDGS 124 (345)
Q Consensus 57 ~l~v~gg~~~~~~~~yd~~~~~------W~~~~~~~~~~~~~~~~~~~~~-----~~~l-yv~GG~~~~~~~~~~~~~~~ 124 (345)
.+++.++. ...+.+||..+++ +..+...+.......-.+++.. ++.. ++.|+.
T Consensus 82 ~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-------------- 146 (397)
T 1sq9_A 82 CLVATTSF-SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV-------------- 146 (397)
T ss_dssp EEEEEEET-TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET--------------
T ss_pred cEEEEEcC-CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC--------------
Confidence 45555543 4578888887776 6665443210000122234444 4555 666654
Q ss_pred cCcCceEEEeCCC------CCcccCC---CC-------C-CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCC
Q 019186 125 FATNEVWSYDPVT------RQWSPRA---SM-------L-VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKD 186 (345)
Q Consensus 125 ~~~~~~~~yd~~t------~~W~~~~---~~-------~-~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~ 186 (345)
...+.+||..+ .+-.... .+ . ....-.+++.. ++ +++.|+.+ ..+.+||..+.
T Consensus 147 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d------g~i~i~d~~~~ 217 (397)
T 1sq9_A 147 --KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN------GTVQISELSTL 217 (397)
T ss_dssp --TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT------SEEEEEETTTT
T ss_pred --CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC------CcEEEEECCCC
Confidence 23577888766 3211100 11 0 11111233333 45 66666543 35899999876
Q ss_pred ceEeCCCC---C--ccCCCceeEEE-ECCEEEEEecCc---ceEEEEECCCCCeee-ccC-------------CCCC-Cc
Q 019186 187 VWVPIPDL---H--RTHNSACTGVV-IGGKVHVLHKGL---STVQVLDHMGLGWTV-EDY-------------GWLQ-GP 242 (345)
Q Consensus 187 ~W~~~~~~---~--~~~~~~~~~~~-~~~~iyv~gG~~---~~i~~yd~~~~~W~~-~~~-------------~~~~-~~ 242 (345)
+-...-.. . .. ..-.++.. -++.++++++.. ..+..||..+.+-.. +.. .... ..
T Consensus 218 ~~~~~~~~~~~h~~~~-~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 296 (397)
T 1sq9_A 218 RPLYNFESQHSMINNS-NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 296 (397)
T ss_dssp EEEEEEECCC---CCC-CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEE
T ss_pred ceeEEEeccccccccC-CccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEE
Confidence 53321111 1 01 11122222 256666666545 789999998765322 221 1111 11
Q ss_pred eEE-EcCeEEEEeC--cEEEEecCCceEEeccc
Q 019186 243 MAI-VHDSVYLMSH--GLIIKQHRDVRKVVASA 272 (345)
Q Consensus 243 ~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~ 272 (345)
++. .++.+++.++ +.+..||..+.+.+..+
T Consensus 297 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 297 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 222 2455555554 78889998775444333
No 91
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.72 E-value=0.18 Score=41.87 Aligned_cols=230 Identities=8% Similarity=-0.102 Sum_probs=113.7
Q ss_pred CCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCC-CCccc
Q 019186 65 PENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVT-RQWSP 142 (345)
Q Consensus 65 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t-~~W~~ 142 (345)
....++++|+.+++...+.... ..-.+++.. +++.+++++. ..++++|..+ ++...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~-----------------~~i~~~d~~~~~~~~~ 77 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSE-----------------GLLYRLSLAGDPSPEK 77 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTSSEEEEEET-----------------TEEEEEESSSCCSCEE
T ss_pred cceeEEEEeCCCCceeeeccCC-----cceEeeEECCCCCEEEEEcC-----------------CeEEEEeCCCCCCceE
Confidence 4568899999988766543322 122233333 5666666542 3699999988 76655
Q ss_pred CCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE-ECCE-EEEEec--C
Q 019186 143 RASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV-IGGK-VHVLHK--G 217 (345)
Q Consensus 143 ~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~-iyv~gG--~ 217 (345)
+...........++.. +++.+++++... .....++.+|..+..-+.+..... ...... -+++ |++.++ .
T Consensus 78 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 78 VDTGFATICNNDHGISPDGALYAISDKVE--FGKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp CCCTTCCCBCSCCEECTTSSEEEEEECTT--TSSCEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEEETT
T ss_pred eccccccccccceEECCCCCEEEEEEeCC--CCcceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEECCCC
Confidence 5432221121222222 555555544321 124678888887776554433221 111122 2444 554443 2
Q ss_pred cceEEEEECCCCCeeeccCCCCCCc-eEE-EcCe-EEEEeC----cEEEEecCCc--eEEeccchhhcccceeEEEEECC
Q 019186 218 LSTVQVLDHMGLGWTVEDYGWLQGP-MAI-VHDS-VYLMSH----GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGD 288 (345)
Q Consensus 218 ~~~i~~yd~~~~~W~~~~~~~~~~~-~~~-~~~~-l~~~~~----~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~ 288 (345)
...++.+|..+.....+........ ++. .+++ |++.+. ..++.++... ...+.... .........-++
T Consensus 152 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg 228 (297)
T 2ojh_A 152 VFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSG 228 (297)
T ss_dssp EEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS---EEEEEEEECTTS
T ss_pred ceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC---cccCCeEECCCC
Confidence 3356667777777666544322111 111 2454 444432 5777777543 44433221 111111122366
Q ss_pred eEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcC
Q 019186 289 DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVS 328 (345)
Q Consensus 289 ~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~ 328 (345)
+.+++++.+.... ..+......+++||+++. +...+.
T Consensus 229 ~~l~~~~~~~~~~-~~~~~~~~~l~~~d~~~~--~~~~~~ 265 (297)
T 2ojh_A 229 DKVVFVSYDADVF-DHPRDLDVRVQLMDMDGG--NVETLF 265 (297)
T ss_dssp SEEEEEEEETTCC-SCCSSEEEEEEEEETTSC--SCEEEE
T ss_pred CEEEEEEcCCCCC-cccccCceEEEEEecCCC--Cceeee
Confidence 6666666543210 000001246889999887 555443
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.70 E-value=0.0088 Score=58.63 Aligned_cols=237 Identities=10% Similarity=0.044 Sum_probs=118.8
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-C--CEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-A--GKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
+.+++.|+. ...+.+||...+++..+..+... ...-.+++.. + +..++.|+. ...+.+
T Consensus 21 g~~latg~~-dg~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s~----------------Dg~I~v 81 (753)
T 3jro_A 21 GKRLATCSS-DKTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSY----------------DGKVLI 81 (753)
T ss_dssp SCCEEEEET-TTEEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEET----------------TSCEEE
T ss_pred CCeEEEEEC-CCcEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEeC----------------CCeEEE
Confidence 334444432 45788999887777665544432 1222234432 3 667777764 246888
Q ss_pred EeCCCCCcccCCCCCCCcee-eeeeEe-C--CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-
Q 019186 133 YDPVTRQWSPRASMLVPRAM-FACCAL-K--EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI- 207 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~-~~~~~~-~--~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~- 207 (345)
||..+++|..+..+...... .+++.. + +.+++.|+.+ ..+.+||..+..-.....+... ......+..
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~-~~~v~~l~~~ 154 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAH-AIGVNSASWA 154 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECC-SSCEEEEEEC
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecC-CCceEEEEec
Confidence 99988876655443322222 222222 3 6677777654 3488898877632111111111 111122222
Q ss_pred --------------CCEEEEEecCcceEEEEECCCCC--eeeccCCCC---C-CceEE-Ec---CeEEEEeC--cEEEEe
Q 019186 208 --------------GGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL---Q-GPMAI-VH---DSVYLMSH--GLIIKQ 261 (345)
Q Consensus 208 --------------~~~iyv~gG~~~~i~~yd~~~~~--W~~~~~~~~---~-~~~~~-~~---~~l~~~~~--~~i~~~ 261 (345)
++.+++.|+....+..||..+.. +........ . ..++. .+ +.+++.++ +.+..+
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 234 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe
Confidence 35667777667778888886552 332211111 1 11111 23 56666655 567777
Q ss_pred cCCce----E-EeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCC
Q 019186 262 HRDVR----K-VVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMT 331 (345)
Q Consensus 262 d~~~W----~-~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~ 331 (345)
|..+- . .+................-++..++.||.++ .|.+||...+. .|.......
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg------------~I~vwd~~~~~-~~~~~~~~~ 296 (753)
T 3jro_A 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN------------KVTLWKENLEG-KWEPAGEVH 296 (753)
T ss_dssp EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS------------CEECCBCCSSS-CCBCCCCBC
T ss_pred cCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC------------EEEEEecCCCC-Ccccccccc
Confidence 66541 1 1111110011121222233677777777543 57888887431 687776554
No 93
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.69 E-value=0.071 Score=45.15 Aligned_cols=183 Identities=15% Similarity=0.092 Sum_probs=101.2
Q ss_pred ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCC--cccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCce
Q 019186 100 TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQ--WSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQ 177 (345)
Q Consensus 100 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~ 177 (345)
..+++++.+.. ...+.++|..+++ |+.-..-. .......+.-++.+++.+ .+.
T Consensus 3 ~~~~~lv~~~~----------------~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~--------~~~ 57 (276)
T 3no2_A 3 SPQHLLVGGSG----------------WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY--------SKG 57 (276)
T ss_dssp CCCEEEEECTT----------------CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC--------BSE
T ss_pred CCCcEEEeeCC----------------CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC--------CCC
Confidence 35677777654 3568888987776 65433211 111222233377887732 134
Q ss_pred EEEEeCCCC-ceEeCCCCCccCCCceeEEEECCEEEEEecC-cceEEEEECCCC-Ceeec-cCC---C---CCCceEEEc
Q 019186 178 AEMYDPEKD-VWVPIPDLHRTHNSACTGVVIGGKVHVLHKG-LSTVQVLDHMGL-GWTVE-DYG---W---LQGPMAIVH 247 (345)
Q Consensus 178 v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~-~~~i~~yd~~~~-~W~~~-~~~---~---~~~~~~~~~ 247 (345)
+..||+... .|+.-.. ............++++++.... ...++.+|+... .|+.. ... . ........+
T Consensus 58 V~~~d~~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 58 AKMITRDGRELWNIAAP--AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp EEEECTTSCEEEEEECC--TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred EEEECCCCCEEEEEcCC--CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 899999332 3764321 1101112223447777776543 677888887543 24422 111 0 112223456
Q ss_pred CeEEEEeC--cEEEEecCCc---eEEeccchhhcccceeEEEEE-CCeEEEEcceecCCCCcccccccCceeeeccCCCC
Q 019186 248 DSVYLMSH--GLIIKQHRDV---RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAER 321 (345)
Q Consensus 248 ~~l~~~~~--~~i~~~d~~~---W~~~~~~p~~~~r~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 321 (345)
|.+++... ..+..||++. |+.-... ..+++... ++.+++++..+ ..|..+|+++.+
T Consensus 136 G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~------~~~~~~~~~~g~~~v~~~~~------------~~v~~~d~~tG~ 197 (276)
T 3no2_A 136 GNYLVPLFATSEVREIAPNGQLLNSVKLSG------TPFSSAFLDNGDCLVACGDA------------HCFVQLNLESNR 197 (276)
T ss_dssp SCEEEEETTTTEEEEECTTSCEEEEEECSS------CCCEEEECTTSCEEEECBTT------------SEEEEECTTTCC
T ss_pred CCEEEEecCCCEEEEECCCCCEEEEEECCC------CccceeEcCCCCEEEEeCCC------------CeEEEEeCcCCc
Confidence 77776654 7899999865 7764321 12234434 67788776521 258899999776
Q ss_pred CceeEc
Q 019186 322 PTWRQV 327 (345)
Q Consensus 322 ~~W~~v 327 (345)
..|+.-
T Consensus 198 ~~w~~~ 203 (276)
T 3no2_A 198 IVRRVN 203 (276)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 678653
No 94
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.68 E-value=0.031 Score=48.37 Aligned_cols=153 Identities=12% Similarity=0.084 Sum_probs=75.9
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.+|+.++. ...++++|+.+++....-..+.. ..-..++.. ++ .+|+.+.. ...+++
T Consensus 10 ~~~~~v~~~~-~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~~----------------~~~i~~ 69 (349)
T 1jmx_B 10 GHEYMIVTNY-PNNLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNNH----------------YGDIYG 69 (349)
T ss_dssp TCEEEEEEET-TTEEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEETT----------------TTEEEE
T ss_pred CCEEEEEeCC-CCeEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeCC----------------CCcEEE
Confidence 5667776653 46899999998865433222220 012233333 44 47777642 347999
Q ss_pred EeCCCCCcccCCCCCC-----CceeeeeeEe-CC-eEEEEcCcC--C---CCCCCceEEEEeCCCCceEe-CCCCCccCC
Q 019186 133 YDPVTRQWSPRASMLV-----PRAMFACCAL-KE-KIVVAGGFT--S---CRKSISQAEMYDPEKDVWVP-IPDLHRTHN 199 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~-----~r~~~~~~~~-~~-~iyv~gG~~--~---~~~~~~~v~~yd~~~~~W~~-~~~~~~~~~ 199 (345)
||+.+++-...-..+. ...-..++.. ++ .+|+..... . .......+.+||+++.+-.. +.....+ .
T Consensus 70 ~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~ 148 (349)
T 1jmx_B 70 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-R 148 (349)
T ss_dssp EETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-S
T ss_pred EeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-C
Confidence 9998876432211111 1111233332 44 455544210 0 00012579999988743211 1111112 1
Q ss_pred CceeE-EEECCEEEEEecCcceEEEEECCCCCe
Q 019186 200 SACTG-VVIGGKVHVLHKGLSTVQVLDHMGLGW 231 (345)
Q Consensus 200 ~~~~~-~~~~~~iyv~gG~~~~i~~yd~~~~~W 231 (345)
...++ ..-++++|+.+ ..+..+|+.+++-
T Consensus 149 ~~~~~~~s~dg~l~~~~---~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 149 QVYLMRAADDGSLYVAG---PDIYKMDVKTGKY 178 (349)
T ss_dssp SCCCEEECTTSCEEEES---SSEEEECTTTCCE
T ss_pred cccceeECCCCcEEEcc---CcEEEEeCCCCce
Confidence 11122 23366677754 2488888877654
No 95
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.66 E-value=0.45 Score=44.82 Aligned_cols=115 Identities=12% Similarity=0.097 Sum_probs=70.0
Q ss_pred EEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeC-CCCC--cccCCCCCCC--------ceeeeeeEeCCeEEEE
Q 019186 97 VVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDP-VTRQ--WSPRASMLVP--------RAMFACCALKEKIVVA 165 (345)
Q Consensus 97 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~ 165 (345)
-++.++.||+.... ...++.+|. .+++ |+.-...... ....+.++.+++||+.
T Consensus 58 P~v~~g~vyv~~~~----------------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 121 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF----------------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKK 121 (571)
T ss_dssp CEEETTEEEEECST----------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEE
T ss_pred cEEECCEEEEEeCC----------------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEE
Confidence 34568999998752 235888998 7765 8764332211 1122456678999887
Q ss_pred cCcCCCCCCCceEEEEeCCCCc--eEe-CCCCCccCCCceeEEEECCEEEEEecC-----cceEEEEECCCC--Ceeec
Q 019186 166 GGFTSCRKSISQAEMYDPEKDV--WVP-IPDLHRTHNSACTGVVIGGKVHVLHKG-----LSTVQVLDHMGL--GWTVE 234 (345)
Q Consensus 166 gG~~~~~~~~~~v~~yd~~~~~--W~~-~~~~~~~~~~~~~~~~~~~~iyv~gG~-----~~~i~~yd~~~~--~W~~~ 234 (345)
.. ...+..+|.++.+ |+. +...+.......+-++.++.+|+..+. ...+++||.+++ .|+.-
T Consensus 122 ~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 122 QA-------NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp CT-------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred eC-------CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 43 2358999998874 874 322111101122234568998876531 468999999876 48653
No 96
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.65 E-value=0.14 Score=44.56 Aligned_cols=213 Identities=9% Similarity=0.035 Sum_probs=102.4
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCc--cc
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQW--SP 142 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W--~~ 142 (345)
...+.++|..+.+-... ++.. ...-.+++.. ++..++.||. ...+.+||..+..- ..
T Consensus 76 Dg~v~iWd~~~~~~~~~--~~~~--~~~v~~~~~s~~~~~l~s~~~----------------d~~v~iw~~~~~~~~~~~ 135 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHA--IPLR--SSWVMTCAYAPSGNYVACGGL----------------DNICSIYNLKTREGNVRV 135 (340)
T ss_dssp TTEEEEEETTTCCEEEE--EECS--SSCEEEEEECTTSSEEEEEET----------------TCEEEEEETTTCSBSCEE
T ss_pred CCcEEEEECCCCCcceE--eecC--CccEEEEEECCCCCEEEEEeC----------------CCeEEEEECccCCCccee
Confidence 35788899877653221 1111 0122233333 5666677764 24678888876531 11
Q ss_pred CCCCCCCc-eeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCc
Q 019186 143 RASMLVPR-AMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGL 218 (345)
Q Consensus 143 ~~~~~~~r-~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~ 218 (345)
...+.... .-.++... ++. ++.|+.+ ..+.+||..+.+-... +... ......+.. ++.+++.|+..
T Consensus 136 ~~~~~~h~~~v~~~~~~~~~~-l~s~s~d------~~i~~wd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 136 SRELAGHTGYLSCCRFLDDNQ-IVTSSGD------TTCALWDIETGQQTTT--FTGH-TGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp EEEEECCSSCEEEEEEEETTE-EEEEETT------SCEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT
T ss_pred EEEecCCCccEEEEEECCCCc-EEEEECC------CcEEEEECCCCcEEEE--EcCC-CCceEEEEECCCCCEEEEEeCC
Confidence 11111111 11122222 455 3444433 3488999988764321 1111 111122222 56677788777
Q ss_pred ceEEEEECCCCCeeec-cCCCC-CCceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhc--ccceeEEEEECCeEE
Q 019186 219 STVQVLDHMGLGWTVE-DYGWL-QGPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFR--RRIGFAMIGMGDDIY 291 (345)
Q Consensus 219 ~~i~~yd~~~~~W~~~-~~~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~--~r~~~~~~~~~~~l~ 291 (345)
..+..+|..+++-... ..... ...++. .++.+++.++ +.+..+|...-+.+....... .........-+++++
T Consensus 206 ~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285 (340)
T ss_dssp SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEE
Confidence 8899999987654322 11111 111111 2556665555 678888876633322211000 111111122367777
Q ss_pred EEcceecCCCCcccccccCceeeeccCCC
Q 019186 292 VIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 292 i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.|+.++ .|.+||..+.
T Consensus 286 ~~g~~d~------------~i~vwd~~~~ 302 (340)
T 1got_B 286 LAGYDDF------------NCNVWDALKA 302 (340)
T ss_dssp EEEETTS------------EEEEEETTTC
T ss_pred EEECCCC------------eEEEEEcccC
Confidence 7776332 5778887654
No 97
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.62 E-value=0.17 Score=43.47 Aligned_cols=190 Identities=11% Similarity=0.018 Sum_probs=101.8
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.||+.+. ....++.||+.+++...+..... ..-.+++.. ++++|+.+..... ....+++|
T Consensus 55 ~g~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~~~------------~~~~i~~~ 117 (333)
T 2dg1_A 55 QGQLFLLDV-FEGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGDFK------------STGGIFAA 117 (333)
T ss_dssp TSCEEEEET-TTCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTSCEEEEECTTSS------------SCCEEEEE
T ss_pred CCCEEEEEC-CCCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCCcEEEEeCCCCC------------CCceEEEE
Confidence 455777654 23579999999988776532111 222344443 6778887643110 12479999
Q ss_pred eCCCCCcccC-CCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CC
Q 019186 134 DPVTRQWSPR-ASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GG 209 (345)
Q Consensus 134 d~~t~~W~~~-~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~ 209 (345)
|+.+++.+.+ ........-..++.. ++.+|+.............++.+|+++.+...+.. .. . ....+.. ++
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~-~-~~~~i~~~~dg 193 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NI-S-VANGIALSTDE 193 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EE-S-SEEEEEECTTS
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CC-C-cccceEECCCC
Confidence 9988775422 211111112222322 67888764321111224578999988766654421 11 1 1222322 44
Q ss_pred -EEEEEecCcceEEEEECCCC--Ceeec--------cCCCCCCceEE-EcCeEEEEe--CcEEEEecCCc
Q 019186 210 -KVHVLHKGLSTVQVLDHMGL--GWTVE--------DYGWLQGPMAI-VHDSVYLMS--HGLIIKQHRDV 265 (345)
Q Consensus 210 -~iyv~gG~~~~i~~yd~~~~--~W~~~--------~~~~~~~~~~~-~~~~l~~~~--~~~i~~~d~~~ 265 (345)
.||+.......+.+||..++ ..... ........++. .+|.+|+.. .+.+..||++.
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCC
Confidence 58887644568999998642 23211 11001112222 267888876 37899999864
No 98
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.078 Score=47.09 Aligned_cols=225 Identities=9% Similarity=0.047 Sum_probs=108.3
Q ss_pred EEEEecCCCCeEEEEeCCCC--CEEeCCCCCccccccceeEEEEE-C-CEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 58 LCVCAFDPENLWQLYDPLRD--LWITLPVLPSKIRHLAHFGVVST-A-GKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
+++.|+. ...+.+||..+. ....+..+... ...-.+++.. + +.+++.|+. ...+.+|
T Consensus 81 ~l~~~~~-dg~v~vw~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~----------------dg~v~iw 141 (416)
T 2pm9_A 81 IIAGALD-NGSLELYSTNEANNAINSMARFSNH--SSSVKTVKFNAKQDNVLASGGN----------------NGEIFIW 141 (416)
T ss_dssp CEEEEES-SSCEEEECCSSTTSCCCEEEECCCS--SSCCCEEEECSSSTTBEEEECS----------------SSCEEBC
T ss_pred eEEEEcc-CCeEEEeecccccccccchhhccCC--ccceEEEEEcCCCCCEEEEEcC----------------CCeEEEE
Confidence 3344432 357888988761 11111112211 0122234443 2 567777764 2468889
Q ss_pred eCCCCC------cc-cCCCCC-CCceeeeeeEe-C-CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCc-----cC
Q 019186 134 DPVTRQ------WS-PRASML-VPRAMFACCAL-K-EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHR-----TH 198 (345)
Q Consensus 134 d~~t~~------W~-~~~~~~-~~r~~~~~~~~-~-~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~-----~~ 198 (345)
|..+.+ -. .+.... ....-.+++.. + +.+++.|+.++ .+.+||..+.+-...-.... .
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~- 214 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN------FASIWDLKAKKEVIHLSYTSPNSGIK- 214 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSS------CEEEEETTTTEEEEEECCCCCSSCCC-
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCC------CEEEEECCCCCcceEEeccccccccC-
Confidence 988765 11 111111 11112223333 3 56777776543 38999998876432222211 1
Q ss_pred CCceeEEEE-CC-EEEEEecCcc---eEEEEECCCCC--eeecc-CCCC-CCceEEE--cCeEEEEeC--cEEEEecCCc
Q 019186 199 NSACTGVVI-GG-KVHVLHKGLS---TVQVLDHMGLG--WTVED-YGWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 199 ~~~~~~~~~-~~-~iyv~gG~~~---~i~~yd~~~~~--W~~~~-~~~~-~~~~~~~--~~~l~~~~~--~~i~~~d~~~ 265 (345)
....+++.. ++ .+++.++... .+..||..+.. -..+. .... ...++.. ++.+++.++ +.+..+|.++
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 112222222 33 4666665444 88999998753 12221 1111 1122221 556555554 7888999877
Q ss_pred eEEeccchhhcccceeEEEEECC-eEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 266 RKVVASASEFRRRIGFAMIGMGD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 266 W~~~~~~p~~~~r~~~~~~~~~~-~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.+.+..+.............-++ .+++.|+.++ .|.+||+.+.
T Consensus 295 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~------------~i~iw~~~~~ 338 (416)
T 2pm9_A 295 AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN------------KIEVQTLQNL 338 (416)
T ss_dssp CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS------------EEEEEESCCC
T ss_pred CccceeecCCCCceEEEEECCCCCCEEEEEecCC------------cEEEEEccCC
Confidence 55444433111222222222244 6888777543 4667777654
No 99
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.56 E-value=0.033 Score=49.77 Aligned_cols=137 Identities=8% Similarity=0.000 Sum_probs=69.3
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS 145 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 145 (345)
...+.+||..+.+- ...+... ..........++..++.|+. ...+.+||..+++-...-.
T Consensus 77 d~~v~i~d~~~~~~--~~~~~~~--~~~~~~~~~~~~~~l~~~~~----------------dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 77 DGHDFLFNTIIRDG--SKMLKRA--DYTAVDTAKLQMRRFILGTT----------------EGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp TTEEEEEECCSEET--TTTSCSC--CEEEEEEECSSSCEEEEEET----------------TSCEEEECTTSCEEEEETT
T ss_pred CCcEEEEEecccce--eeEEecC--CceEEEEEecCCCEEEEEEC----------------CCCEEEEeCCCcceeeecc
Confidence 35788898766432 2222211 01111122236777777764 2468889987665332211
Q ss_pred CCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-CCEEEEEecCcceEEE
Q 019186 146 MLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GGKVHVLHKGLSTVQV 223 (345)
Q Consensus 146 ~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~gG~~~~i~~ 223 (345)
.....-.+++.. ++.+++.|+.+ ..+.+||..+.+-.. .+......-.++... ++..++.|+....+..
T Consensus 137 -~h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 137 -AHVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGSNPR--TLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp -SSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCCCE--EEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred -cccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCcCce--EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 111112233332 56666666544 358999987654211 111110111222222 5666667666778999
Q ss_pred EECCCCCe
Q 019186 224 LDHMGLGW 231 (345)
Q Consensus 224 yd~~~~~W 231 (345)
||..+++-
T Consensus 208 wd~~~~~~ 215 (420)
T 3vl1_A 208 WECGTGTT 215 (420)
T ss_dssp EETTTTEE
T ss_pred eECCCCce
Confidence 99887643
No 100
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.54 E-value=0.23 Score=43.68 Aligned_cols=100 Identities=14% Similarity=0.047 Sum_probs=52.5
Q ss_pred CCEEEEEecCcceEEEEECCCCCeeeccCC-------CCC-CceEE-EcCeEEEEeC-----cEEEEecCCceEEeccch
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYG-------WLQ-GPMAI-VHDSVYLMSH-----GLIIKQHRDVRKVVASAS 273 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~-------~~~-~~~~~-~~~~l~~~~~-----~~i~~~d~~~W~~~~~~p 273 (345)
++ ++++|+....+..||..+.+-...-.. ... ..++. .++.+++.++ +.+..||..+.+.+..+.
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec
Confidence 56 666776778899999987654322111 111 11111 2555555554 478888877644333332
Q ss_pred hh------------cccceeEEEE-ECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 274 EF------------RRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 274 ~~------------~~r~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.+ ....-..++. -+++.++.|+.++ .|.+||+.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------~i~iwd~~~~ 323 (397)
T 1sq9_A 276 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG------------KLRFWDVKTK 323 (397)
T ss_dssp BC--------CCBSBSSCEEEEEECSSSSEEEEEETTS------------EEEEEETTTT
T ss_pred cCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC------------eEEEEEcCCC
Confidence 10 1111122222 2566777766332 5788888765
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.13 Score=43.52 Aligned_cols=211 Identities=11% Similarity=0.081 Sum_probs=98.2
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCC-cccC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQ-WSPR 143 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~-W~~~ 143 (345)
...+.+||..+++-...-.... ..-.+++.. ++.+++.|+.+ ..+.+|+..... ...+
T Consensus 38 dg~v~vw~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d----------------g~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 38 DGTVRLWSKDDQWLGTVVYTGQ----GFLNSVCYDSEKELLLFGGKD----------------TMINGVPLFATSGEDPL 97 (313)
T ss_dssp TSEEEEEEESSSEEEEEEEECS----SCEEEEEEETTTTEEEEEETT----------------SCEEEEETTCCTTSCC-
T ss_pred CCcEEEEECCCCEEEEEeecCC----ccEEEEEECCCCCEEEEecCC----------------CeEEEEEeeecCCCCcc
Confidence 4578899987664332211111 222234443 56666776642 346677765432 1222
Q ss_pred CCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE-EE-CCEEEEEecCcceE
Q 019186 144 ASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VI-GGKVHVLHKGLSTV 221 (345)
Q Consensus 144 ~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~-~~~iyv~gG~~~~i 221 (345)
..+............++..++.|+.+ ..+.+||......... ... .....+. .- ++..++.++....+
T Consensus 98 ~~~~~~~~~i~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~-~~~---~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 98 YTLIGHQGNVCSLSFQDGVVISGSWD------KTAKVWKEGSLVYNLQ-AHN---ASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp CEECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTEEEEEEE-CCS---SCEEEEEEEETTTTEEEEEETTSCE
T ss_pred cchhhcccCEEEEEecCCEEEEEeCC------CCEEEEcCCcEEEecc-cCC---CceeEEEEccCCCCEEEEEECCCCE
Confidence 22222222222233356666666544 3478888332222211 111 1111222 22 56666676667788
Q ss_pred EEEECCCCCeeeccCCCC--CCceEEEcCeEEEEeC-cEEEEecCCceEEeccchhhcccceeEEEEE-CCeEEEEccee
Q 019186 222 QVLDHMGLGWTVEDYGWL--QGPMAIVHDSVYLMSH-GLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GDDIYVIGGVI 297 (345)
Q Consensus 222 ~~yd~~~~~W~~~~~~~~--~~~~~~~~~~l~~~~~-~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~-~~~l~i~GG~~ 297 (345)
..||.....-........ .......++.++..+. +.+..+|..+.+.+..+....... ..++.. +++ ++.|+.+
T Consensus 168 ~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~-l~~~~~d 245 (313)
T 3odt_A 168 KLWQNDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFV-YCIKLLPNGD-IVSCGED 245 (313)
T ss_dssp EEEETTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECTTSC-EEEEETT
T ss_pred EEEecCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceE-EEEEEecCCC-EEEEecC
Confidence 889843322222111111 1222234666444444 788899887744443332111111 223333 443 4555532
Q ss_pred cCCCCcccccccCceeeeccCCC
Q 019186 298 GPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 298 ~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
..|.+||+.+.
T Consensus 246 ------------g~v~iwd~~~~ 256 (313)
T 3odt_A 246 ------------RTVRIWSKENG 256 (313)
T ss_dssp ------------SEEEEECTTTC
T ss_pred ------------CEEEEEECCCC
Confidence 26788888776
No 102
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.53 E-value=0.02 Score=50.16 Aligned_cols=140 Identities=12% Similarity=0.077 Sum_probs=74.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCce-eeeeeEe-CCeEEEEcCcCCCCCCCceE
Q 019186 101 AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRA-MFACCAL-KEKIVVAGGFTSCRKSISQA 178 (345)
Q Consensus 101 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~-~~~~~~~-~~~iyv~gG~~~~~~~~~~v 178 (345)
++.+++.|+. ...+.+||..+++++.+..+..... -.+++.. ++..++.|+.++ .+
T Consensus 19 ~~~~l~~~~~----------------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg------~i 76 (372)
T 1k8k_C 19 DRTQIAICPN----------------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR------NA 76 (372)
T ss_dssp TSSEEEEECS----------------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS------CE
T ss_pred CCCEEEEEeC----------------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC------eE
Confidence 5667777764 3468889998886655444332222 2223333 566666666442 48
Q ss_pred EEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCC-eeeccCC----CC-CCceEE-EcCe
Q 019186 179 EMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLG-WTVEDYG----WL-QGPMAI-VHDS 249 (345)
Q Consensus 179 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~-W~~~~~~----~~-~~~~~~-~~~~ 249 (345)
.+||.++.++.....+... ......+.. ++..+++|+....+..||..+.. |...... .. ...++. .++.
T Consensus 77 ~vwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRI-NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 155 (372)
T ss_dssp EEEEEETTEEEEEEECCCC-SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred EEEECCCCeeeeeEEeecC-CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC
Confidence 8999988876544322222 112222222 56666666666778888776554 3222111 11 111111 1555
Q ss_pred EEEEeC--cEEEEecC
Q 019186 250 VYLMSH--GLIIKQHR 263 (345)
Q Consensus 250 l~~~~~--~~i~~~d~ 263 (345)
+++.++ +.+..||.
T Consensus 156 ~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSA 171 (372)
T ss_dssp EEEEEETTSCEEEEEC
T ss_pred EEEEEcCCCCEEEEEc
Confidence 555554 67777773
No 103
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.52 E-value=0.27 Score=41.72 Aligned_cols=235 Identities=10% Similarity=0.036 Sum_probs=105.8
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE---CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST---AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
+.+++.|+. ...+.+||...+..+.+..+... ...-.+++.. ++.+++.|+. ...+.+
T Consensus 21 g~~las~s~-D~~v~iw~~~~~~~~~~~~l~gH--~~~V~~v~~s~~~~g~~l~s~s~----------------D~~v~i 81 (297)
T 2pm7_B 21 GKRMATCSS-DKTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSY----------------DGKVMI 81 (297)
T ss_dssp SSEEEEEET-TSCEEEEEBCSSCBCCCEEECCC--SSCEEEEEECCGGGCSEEEEEET----------------TTEEEE
T ss_pred CCEEEEEeC-CCEEEEEecCCCCcEEEEEEccc--cCCeEEEEecCCCcCCEEEEEcC----------------CCEEEE
Confidence 334444442 35688888875543333222221 0112233332 2567777764 246888
Q ss_pred EeCCCCCcccCCCCCCCceee-eeeEe-C--CeEEEEcCcCCCCCCCceEEEEeCCCCc-eEeCCCCCccCCCceeEEEE
Q 019186 133 YDPVTRQWSPRASMLVPRAMF-ACCAL-K--EKIVVAGGFTSCRKSISQAEMYDPEKDV-WVPIPDLHRTHNSACTGVVI 207 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~~-~~~~~-~--~~iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~ 207 (345)
||..+++|..+..+....... +++.. + +.+++.|+.+ ..+.+||..+.. +... .+... ......+..
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~~~~~~~-~~~~h-~~~v~~~~~ 153 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKENGTTSPI-IIDAH-AIGVNSASW 153 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSSSCBCCE-EEECC-SSCEEEEEE
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCCCceeee-eeecc-cCccceEee
Confidence 999888776554332211111 22222 2 5566666544 347788876542 2110 00000 111111111
Q ss_pred ---------------CCEEEEEecCcceEEEEECCCCC--eeeccCCCC---CCceEEE--c---CeEEEEeC--cEEEE
Q 019186 208 ---------------GGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL---QGPMAIV--H---DSVYLMSH--GLIIK 260 (345)
Q Consensus 208 ---------------~~~iyv~gG~~~~i~~yd~~~~~--W~~~~~~~~---~~~~~~~--~---~~l~~~~~--~~i~~ 260 (345)
++++++.|+.-..+..||..+.+ +........ ....+.. + +.+++.++ +.+..
T Consensus 154 ~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~i 233 (297)
T 2pm7_B 154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCII 233 (297)
T ss_dssp CCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred cCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEE
Confidence 23566777766778888876543 433221111 0111111 2 24444443 55555
Q ss_pred ecCCc----eEEeccchhhcccceeEEE-EECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCC
Q 019186 261 QHRDV----RKVVASASEFRRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPM 330 (345)
Q Consensus 261 ~d~~~----W~~~~~~p~~~~r~~~~~~-~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~ 330 (345)
+|.+. |.............-..++ ..++++++.||.++ .|.+|+...++ .|..+..+
T Consensus 234 Wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~------------~v~lw~~~~~g-~w~~~~~~ 295 (297)
T 2pm7_B 234 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN------------KVTLWKENLEG-KWEPAGEV 295 (297)
T ss_dssp EEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS------------CEEEEEECTTS-CEEEC---
T ss_pred EEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC------------cEEEEEECCCC-cEEecccc
Confidence 55433 4432110000111112222 23677777777443 46677765321 79887765
No 104
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.51 E-value=0.12 Score=44.43 Aligned_cols=140 Identities=9% Similarity=-0.043 Sum_probs=66.9
Q ss_pred CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeeccCC
Q 019186 160 EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYG 237 (345)
Q Consensus 160 ~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~ 237 (345)
+.+++.++.+ ..+.+||..+.+-... +... ......+.+ ++++++.|+....+..||..+.+-...-..
T Consensus 185 ~~~~~s~~~d------~~i~i~d~~~~~~~~~--~~~h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 255 (340)
T 4aow_A 185 NPIIVSCGWD------KLVKVWNLANCKLKTN--HIGH-TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 255 (340)
T ss_dssp SCEEEEEETT------SCEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEEcCC------CEEEEEECCCCceeeE--ecCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC
Confidence 3455555543 2388899887764322 1111 111222222 567777777777888999876643221111
Q ss_pred CC-CCceEEE-cCeEEEEeC-cEEEEecCCceEEeccchh--------h-cccceeEEEEECCeEEEEcceecCCCCccc
Q 019186 238 WL-QGPMAIV-HDSVYLMSH-GLIIKQHRDVRKVVASASE--------F-RRRIGFAMIGMGDDIYVIGGVIGPDRWNWD 305 (345)
Q Consensus 238 ~~-~~~~~~~-~~~l~~~~~-~~i~~~d~~~W~~~~~~p~--------~-~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~ 305 (345)
.. ...++.. ++.++..+. +.+..+|.+.-..+..+.. . ..........-+++.++.|+.++
T Consensus 256 ~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg------- 328 (340)
T 4aow_A 256 GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN------- 328 (340)
T ss_dssp SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS-------
T ss_pred CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC-------
Confidence 11 1111122 334433332 6777777665222211110 0 01111111122667777777443
Q ss_pred ccccCceeeeccCCC
Q 019186 306 IKPMSDVDVLTVGAE 320 (345)
Q Consensus 306 ~~~~~~v~~yd~~~~ 320 (345)
.|.+||++++
T Consensus 329 -----~v~iW~~~tG 338 (340)
T 4aow_A 329 -----LVRVWQVTIG 338 (340)
T ss_dssp -----CEEEEEEEC-
T ss_pred -----EEEEEeCCCc
Confidence 5788998776
No 105
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.51 E-value=0.055 Score=46.60 Aligned_cols=240 Identities=11% Similarity=0.073 Sum_probs=112.7
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE---CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST---AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
+.+++.|+ ....+.++|..+++...+..+... ...-.+++.. ++.+++.|+. ...+.+
T Consensus 25 g~~lasgs-~D~~v~lwd~~~~~~~~~~~l~gH--~~~V~~v~~~~~~~~~~l~s~s~----------------D~~v~i 85 (316)
T 3bg1_A 25 GTRLATCS-SDRSVKIFDVRNGGQILIADLRGH--EGPVWQVAWAHPMYGNILASCSY----------------DRKVII 85 (316)
T ss_dssp GCEEEEEE-TTTEEEEEEEETTEEEEEEEEECC--SSCEEEEEECCGGGSSCEEEEET----------------TSCEEE
T ss_pred CCEEEEEe-CCCeEEEEEecCCCcEEEEEEcCC--CccEEEEEeCCCCCCCEEEEEEC----------------CCEEEE
Confidence 33444444 345788899877654333222211 0112233332 2566677664 246888
Q ss_pred EeCCCCCcccCCCCCCCcee-eeeeEe-C--CeEEEEcCcCCCCCCCceEEEEeCCCC-ceEeCCCCCccCCCceeEEEE
Q 019186 133 YDPVTRQWSPRASMLVPRAM-FACCAL-K--EKIVVAGGFTSCRKSISQAEMYDPEKD-VWVPIPDLHRTHNSACTGVVI 207 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~-~~~~~~-~--~~iyv~gG~~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~ 207 (345)
||+.+++|.....+...... .+++.. + +.+++.|+.++ .+.+||..+. .|.....+... ......+..
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~------~i~lwd~~~~~~~~~~~~~~~h-~~~v~~~~~ 158 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG------AISLLTYTGEGQWEVKKINNAH-TIGCNAVSW 158 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS------CEEEEEECSSSCEEECCBTTSS-SSCBCCCEE
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC------CEEEEecCCCCCcceeeeeccc-cCCcceEEE
Confidence 99988776544322211111 222222 2 56667776553 3778887765 46543222211 111001111
Q ss_pred -------------------CCEEEEEecCcceEEEEECCC-CCeeeccCCCCC-Cce--EEE--c----CeEEEEeC--c
Q 019186 208 -------------------GGKVHVLHKGLSTVQVLDHMG-LGWTVEDYGWLQ-GPM--AIV--H----DSVYLMSH--G 256 (345)
Q Consensus 208 -------------------~~~iyv~gG~~~~i~~yd~~~-~~W~~~~~~~~~-~~~--~~~--~----~~l~~~~~--~ 256 (345)
.+++++.|+.-..+..+|... +.|..+.....+ ..+ +.. + +.+++.++ +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 134666776666777888763 456554332221 111 111 2 13444443 5
Q ss_pred EEEEecCCc-----eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccC-CCCCceeEcCCC
Q 019186 257 LIIKQHRDV-----RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVG-AERPTWRQVSPM 330 (345)
Q Consensus 257 ~i~~~d~~~-----W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~-~~~~~W~~v~~~ 330 (345)
.+..++.+. |... .+.............-++.+++.||.++ .|.+|+.. .+ .|..+..+
T Consensus 239 ~v~iw~~~~~~~~~~~~~-~~~~~~~~v~~v~~sp~g~~las~~~D~------------~v~lw~~~~~g--~~~~~~~~ 303 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPK-LLHKFNDVVWHVSWSITANILAVSGGDN------------KVTLWKESVDG--QWVCISDV 303 (316)
T ss_dssp EEEEEECSSTTCCCCBCC-EEEECSSCEEEEEECTTTCCEEEEESSS------------CEEEEEECTTS--CEEEEEEC
T ss_pred eEEEEEccCccccchhhh-hhhcCCCcEEEEEEcCCCCEEEEEcCCC------------eEEEEEECCCC--cEEEeeec
Confidence 666666432 2210 0110011111111223567777777543 46777775 44 79999888
Q ss_pred CCccee
Q 019186 331 TRCRGT 336 (345)
Q Consensus 331 ~~~r~~ 336 (345)
......
T Consensus 304 ~~~~~~ 309 (316)
T 3bg1_A 304 NKGQGS 309 (316)
T ss_dssp C-----
T ss_pred cCCCCc
Confidence 765544
No 106
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.50 E-value=0.13 Score=43.79 Aligned_cols=211 Identities=10% Similarity=-0.004 Sum_probs=108.4
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.||+... ....++.||+.+++..... .+.. -.+++.. ++++|+..+ ..+++|
T Consensus 24 ~~~l~~~d~-~~~~i~~~d~~~~~~~~~~-~~~~-----~~~i~~~~dG~l~v~~~------------------~~l~~~ 78 (297)
T 3g4e_A 24 SNSLLFVDI-PAKKVCRWDSFTKQVQRVT-MDAP-----VSSVALRQSGGYVATIG------------------TKFCAL 78 (297)
T ss_dssp TTEEEEEET-TTTEEEEEETTTCCEEEEE-CSSC-----EEEEEEBTTSSEEEEET------------------TEEEEE
T ss_pred CCEEEEEEC-CCCEEEEEECCCCcEEEEe-CCCc-----eEEEEECCCCCEEEEEC------------------CeEEEE
Confidence 456776653 3468899999988764432 2211 1233333 567766532 368999
Q ss_pred eCCCCCcccCCCCC----CCceeeeeeEeCCeEEEEcCcCC-----CCCCCceEEEEeCCCCceEeCCCCCccCCCceeE
Q 019186 134 DPVTRQWSPRASML----VPRAMFACCALKEKIVVAGGFTS-----CRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTG 204 (345)
Q Consensus 134 d~~t~~W~~~~~~~----~~r~~~~~~~~~~~iyv~gG~~~-----~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~ 204 (345)
|+.+++++.+.... ..+....++.-++++|+...... .......++.+|+.. +...+. .. ......
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~---~~-~~~png 153 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYF---DQ-VDISNG 153 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEE---EE-ESBEEE
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEe---ec-cccccc
Confidence 99988877654322 11222222223678776431111 001235688888753 333221 11 111222
Q ss_pred EEE--CC-EEEEEecCcceEEEEEC--CCCCee------eccCCCC-CCceEE-EcCeEEEEeC--cEEEEecCCceEEe
Q 019186 205 VVI--GG-KVHVLHKGLSTVQVLDH--MGLGWT------VEDYGWL-QGPMAI-VHDSVYLMSH--GLIIKQHRDVRKVV 269 (345)
Q Consensus 205 ~~~--~~-~iyv~gG~~~~i~~yd~--~~~~W~------~~~~~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~ 269 (345)
+.. ++ .+|+.......|++||. .++... ....... +..+++ .+|.||+... ..|..||+++-+.+
T Consensus 154 i~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred eEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence 333 34 68888755678899886 455432 1211111 223333 3678998864 78999999852222
Q ss_pred ccchhhcccceeEEEEEC----CeEEEEccee
Q 019186 270 ASASEFRRRIGFAMIGMG----DDIYVIGGVI 297 (345)
Q Consensus 270 ~~~p~~~~r~~~~~~~~~----~~l~i~GG~~ 297 (345)
..++.+..+. ..+.++ +.|||.....
T Consensus 234 ~~i~~p~~~~--t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 234 QTVKLPVDKT--TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEECSSSBE--EEEEEESGGGCEEEEEEBCT
T ss_pred EEEECCCCCc--eEEEEeCCCCCEEEEEcCCc
Confidence 2222111222 223332 4789886543
No 107
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.45 E-value=0.16 Score=47.57 Aligned_cols=288 Identities=11% Similarity=0.062 Sum_probs=136.4
Q ss_pred CCcCC--CCChHHHHHHhhccCCCc----chhhHHHhhHHHHHhhcChhhHHHHHhcC-CCCcEEEEEecCCCCeEEEEe
Q 019186 1 MSELI--EGLPDAVALRCLARVPFF----LHPKLELVSRSWRAAIRSPELFKARQEVG-SSENLLCVCAFDPENLWQLYD 73 (345)
Q Consensus 1 ~~~~~--~~lp~~~~~~~l~~~p~~----~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~l~v~gg~~~~~~~~yd 73 (345)
|+.+- ..|.++=+..+..++-.. ....+......|..+......+. ...+. ..++.+|+.+. ....+.++|
T Consensus 88 Mp~~~~~~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-~~~~~~~p~~~~~vs~~-~d~~V~v~D 165 (543)
T 1nir_A 88 MPNWGSSGELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPK-KQLNDLDLPNLFSVTLR-DAGQIALVD 165 (543)
T ss_dssp CCCSTTTTSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCS-SCCSCCCGGGEEEEEEG-GGTEEEEEE
T ss_pred CCCcccccCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCc-ccccccCCCCEEEEEEc-CCCeEEEEE
Confidence 44443 568888666666554211 11222333444443321111111 11111 12567777764 346789999
Q ss_pred CCCCCEEeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeC--CCCCcccCCCCCCC
Q 019186 74 PLRDLWITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDP--VTRQWSPRASMLVP 149 (345)
Q Consensus 74 ~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~--~t~~W~~~~~~~~~ 149 (345)
..+++-... ++.. ..-|+++.. ++ .+|+.+. ...+.+||+ .+.+- +..++..
T Consensus 166 ~~t~~~~~~--i~~g---~~~~~v~~spdg~~l~v~~~-----------------d~~V~v~D~~~~t~~~--~~~i~~g 221 (543)
T 1nir_A 166 GDSKKIVKV--IDTG---YAVHISRMSASGRYLLVIGR-----------------DARIDMIDLWAKEPTK--VAEIKIG 221 (543)
T ss_dssp TTTCCEEEE--EECS---TTEEEEEECTTSCEEEEEET-----------------TSEEEEEETTSSSCEE--EEEEECC
T ss_pred CCCceEEEE--EecC---cccceEEECCCCCEEEEECC-----------------CCeEEEEECcCCCCcE--EEEEecC
Confidence 988865322 2211 123445443 44 4666643 146999999 55442 2222322
Q ss_pred ceeeeeeEe-----CCeEEEEcCcCCCCCCCceEEEEeCCCCceE-eCCCCC--------ccCCCceeEEEE---CCEEE
Q 019186 150 RAMFACCAL-----KEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-PIPDLH--------RTHNSACTGVVI---GGKVH 212 (345)
Q Consensus 150 r~~~~~~~~-----~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~--------~~~~~~~~~~~~---~~~iy 212 (345)
..-..++.. +++..+++... ...+.++|..+.+-. .++... .+ ......+.. ++.+|
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~-~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHP-EPRVAAIIASHEHPEFI 295 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCEES-CCCEEEEEECSSSSEEE
T ss_pred CCcceEEeCCCcCCCCCEEEEEEcc-----CCeEEEEeccccccceeecccCcccCcccccc-CCceEEEEECCCCCEEE
Confidence 222333333 45443333322 245888998876532 222110 01 001222222 45666
Q ss_pred EEecCcceEEEEECCCCCee---eccCCCCCCceEE-EcCe-EEEEeC--cEEEEecCCceEEeccchh---hcccceeE
Q 019186 213 VLHKGLSTVQVLDHMGLGWT---VEDYGWLQGPMAI-VHDS-VYLMSH--GLIIKQHRDVRKVVASASE---FRRRIGFA 282 (345)
Q Consensus 213 v~gG~~~~i~~yd~~~~~W~---~~~~~~~~~~~~~-~~~~-l~~~~~--~~i~~~d~~~W~~~~~~p~---~~~r~~~~ 282 (345)
+.......+..+|..+.+-. .++.......++. .+|+ +|+.+. +.|..+|.++.+.+..++. +.+.....
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE
T ss_pred EEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc
Confidence 66656778999998764321 2222112222222 3555 555543 7888899887444433321 11111122
Q ss_pred EEEE-CCeEEEEcceecCCCCcccccccCceeeeccCCCC---CceeEcCCCC
Q 019186 283 MIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAER---PTWRQVSPMT 331 (345)
Q Consensus 283 ~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~---~~W~~v~~~~ 331 (345)
+..- ++.+|+.+.... +.|-+||..+.+ ..|+.+..++
T Consensus 376 ~~~p~~g~~~~s~~~~d-----------~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 376 FVHPKYGPVWSTSHLGD-----------GSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EEETTTEEEEEEEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred cCCCCCccEEEeccCCC-----------ceEEEEEeCCCCCchhcCeEEEEEE
Confidence 2222 366777654222 256677776521 1377665554
No 108
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.43 E-value=0.36 Score=42.19 Aligned_cols=214 Identities=12% Similarity=0.038 Sum_probs=100.7
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
...+.++|..+.+-...-..+. ..-.+++.. ++..++.||.+ ..+.+|+...+.-....
T Consensus 85 Dg~v~vWd~~~~~~~~~~~~~~----~~v~~~~~sp~g~~lasg~~d----------------~~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 85 DGKVIVWDSFTTNKEHAVTMPC----TWVMACAYAPSGCAIACGGLD----------------NKCSVYPLTFDKNENMA 144 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECSS----SCCCEEEECTTSSEEEEESTT----------------SEEEEEECCCCTTCCSG
T ss_pred CCeEEEEECCCCCcceEEecCC----CCEEEEEECCCCCEEEEeeCC----------------CCEEEEEEecccccccc
Confidence 3567788877665433222221 112233333 56677777752 45677776543211110
Q ss_pred ----CCCCCcee-eeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE----CCEEEEE
Q 019186 145 ----SMLVPRAM-FACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI----GGKVHVL 214 (345)
Q Consensus 145 ----~~~~~r~~-~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~----~~~iyv~ 214 (345)
.+...... .++... ++..++.|+.+ ..+.+||.++.+-... +... ......+.+ ++.+++.
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D------~~v~lwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~g~~l~s 215 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTNSDMQILTASGD------GTCALWDVESGQLLQS--FHGH-GADVLCLDLAPSETGNTFVS 215 (354)
T ss_dssp GGCEEEEECSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEE--EECC-SSCEEEEEECCCSSCCEEEE
T ss_pred ccceeeeccCCcEEEEEEeCCCCEEEEEeCC------CcEEEEeCCCCeEEEE--EcCC-CCCeEEEEEEeCCCCCEEEE
Confidence 01000111 111222 34444444433 3588999888764321 1111 111112222 3467777
Q ss_pred ecCcceEEEEECCCCCeeeccCC-CCCC-ceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEE--EEC
Q 019186 215 HKGLSTVQVLDHMGLGWTVEDYG-WLQG-PMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMI--GMG 287 (345)
Q Consensus 215 gG~~~~i~~yd~~~~~W~~~~~~-~~~~-~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~--~~~ 287 (345)
|+....+..+|+.+++....-.. .... .++. .++.+++.++ +.+..+|...-+.+..............+ ..+
T Consensus 216 gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 216 GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCC
Confidence 77778899999988765432111 1111 1111 2455555554 67777877652222211100111111222 235
Q ss_pred CeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 288 DDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 288 ~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.+++.|+.++ .|.+||..+.
T Consensus 296 g~~l~~g~~d~------------~i~vwd~~~~ 316 (354)
T 2pbi_B 296 GRLLFAGYNDY------------TINVWDVLKG 316 (354)
T ss_dssp SSEEEEEETTS------------CEEEEETTTC
T ss_pred CCEEEEEECCC------------cEEEEECCCC
Confidence 77777766332 5788888654
No 109
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.42 E-value=0.21 Score=43.65 Aligned_cols=217 Identities=11% Similarity=-0.017 Sum_probs=101.4
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
...+.++|..+++-.........-....-.+++.. +++.++.|+. ...+.+||..+++-..
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~----------------d~~i~iwd~~~~~~~~-- 163 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK----------------DICIKVWDLAQQVVLS-- 163 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET----------------TSCEEEEETTTTEEEE--
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC----------------CCeEEEEECCCCcEEE--
Confidence 45788999887753221111100000112234433 5667777764 2468889998765322
Q ss_pred CCCCCce-eeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcc
Q 019186 145 SMLVPRA-MFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLS 219 (345)
Q Consensus 145 ~~~~~r~-~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~ 219 (345)
.+..... -.+++.. +..+++.|+.++ .+.+||..+.+-...-..........+++.. ++.+++.|+...
T Consensus 164 ~~~~h~~~V~~~~~~~~~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 164 SYRAHAAQVTCVAASPHKDSVFLSCSEDN------RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTS------CEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred EEcCcCCceEEEEecCCCCCceeeecccc------ccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 1111111 1222222 335666666543 4889999877643221111110112222222 456777877777
Q ss_pred eEEEEECCCCCee-eccCCCCC-CceEE-EcC-eEEEEeC--cEEEEecCCceEEeccchhhcccceeEEEEE--CCeEE
Q 019186 220 TVQVLDHMGLGWT-VEDYGWLQ-GPMAI-VHD-SVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIY 291 (345)
Q Consensus 220 ~i~~yd~~~~~W~-~~~~~~~~-~~~~~-~~~-~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~--~~~l~ 291 (345)
.+..||.++++-. .+...... ..++. .++ .+++.++ +.|..+|..+.+.+.... ....-.+++.. +..++
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~--H~~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA--HRDFVRDATWSPLNHSLL 315 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC--CSSCEEEEEECSSSTTEE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcC--CCCCEEEEEEeCCCCeEE
Confidence 8999999876432 12111111 11221 134 4444333 678888877633322110 11111122221 34577
Q ss_pred EEcceecCCCCcccccccCceeeeccCCC
Q 019186 292 VIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 292 i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.||.++ .|.+|++.+.
T Consensus 316 as~s~D~------------~v~~w~v~~~ 332 (344)
T 4gqb_B 316 TTVGWDH------------QVVHHVVPTE 332 (344)
T ss_dssp EEEETTS------------CEEEEECCC-
T ss_pred EEEcCCC------------eEEEEECCCC
Confidence 7777544 4667777654
No 110
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.42 E-value=0.11 Score=45.56 Aligned_cols=171 Identities=9% Similarity=0.005 Sum_probs=79.3
Q ss_pred CceEEEeCCCCCcccCCCCC---CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee
Q 019186 128 NEVWSYDPVTRQWSPRASML---VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT 203 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~---~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 203 (345)
..+.+||..+++-....... ....-.+++.. +++.++.|+.++ .+.+||..+.+-... +... .....
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg------~v~iwd~~~~~~~~~--~~~h-~~~v~ 185 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF------SVKVWDLSQKAVLKS--YNAH-SSEVN 185 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEETTTTEEEEE--ECCC-SSCEE
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECCCCcEEEE--EcCC-CCCEE
Confidence 35888888776533222211 11111222222 667777776543 388999988764322 1111 11122
Q ss_pred EEEE--C-CEEEEEecCcceEEEEECCCCCeeeccCCCC-C--CceEEE---cCeEEEEeC--cEEEEecCCceEEeccc
Q 019186 204 GVVI--G-GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-Q--GPMAIV---HDSVYLMSH--GLIIKQHRDVRKVVASA 272 (345)
Q Consensus 204 ~~~~--~-~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~-~--~~~~~~---~~~l~~~~~--~~i~~~d~~~W~~~~~~ 272 (345)
.+.. + +.+++.++....+..||.++.+-........ . ...+.. ++.+++.+. ..+..+|..+.+.+..+
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE
Confidence 2222 3 3466777666789999988765433221111 1 111111 356666654 67888887663333222
Q ss_pred hhhcccceeEEEE-ECC-eEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 273 SEFRRRIGFAMIG-MGD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 273 p~~~~r~~~~~~~-~~~-~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
....... ..++. .++ ++++.|+.++ .|.+||.++.
T Consensus 266 ~~~~~~v-~~l~~sp~~~~~lasgs~D~------------~i~iwd~~~~ 302 (357)
T 4g56_B 266 AVHSQNI-TGLAYSYHSSPFLASISEDC------------TVAVLDADFS 302 (357)
T ss_dssp CCCSSCE-EEEEECSSSSCCEEEEETTS------------CEEEECTTSC
T ss_pred eccceeE-EEEEEcCCCCCEEEEEeCCC------------EEEEEECCCC
Confidence 2111111 12222 234 5566665332 5778888776
No 111
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.41 E-value=0.021 Score=49.70 Aligned_cols=172 Identities=8% Similarity=-0.007 Sum_probs=84.3
Q ss_pred eEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCC
Q 019186 68 LWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASM 146 (345)
Q Consensus 68 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~ 146 (345)
.++.+|..++++..+...... ..-..++.. +++||+.+... ....+++||+.+++++.+...
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~l~~~~~~~--------------~~~~v~~~~~~~g~~~~~~~~ 81 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDCLYSVDKED--------------DEGGIAAWQIDGQTAHKLNTV 81 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCEEEEEEEET--------------TEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeecc---CCcceEEEccCCeEEEEEecC--------------CCceEEEEEecCCcEEEeeee
Confidence 356678888887664332211 111123333 67777775321 135789999987776655432
Q ss_pred CCC-ceeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCC-CCceEeCCCCCc------c--CCCceeEEE--ECCEEE
Q 019186 147 LVP-RAMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPE-KDVWVPIPDLHR------T--HNSACTGVV--IGGKVH 212 (345)
Q Consensus 147 ~~~-r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~-~~~W~~~~~~~~------~--~~~~~~~~~--~~~~iy 212 (345)
... ..-..++.. ++ .+|+.+.. ...+.+||.. +...+.+..... . .......+. -++++|
T Consensus 82 ~~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~ 155 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLA 155 (347)
T ss_dssp EEESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEE
T ss_pred ecCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEE
Confidence 211 111223333 44 46666432 2357788874 333332221111 0 001111222 366788
Q ss_pred EEecCcceEEEEECC-CCCeeeccCCC-----CCCceEE-EcCe-EEEEeC--cEEEEec
Q 019186 213 VLHKGLSTVQVLDHM-GLGWTVEDYGW-----LQGPMAI-VHDS-VYLMSH--GLIIKQH 262 (345)
Q Consensus 213 v~gG~~~~i~~yd~~-~~~W~~~~~~~-----~~~~~~~-~~~~-l~~~~~--~~i~~~d 262 (345)
+.+.....+..||+. +++...+.... ....++. .+|+ +|+.+. +.+..|+
T Consensus 156 v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 215 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLK 215 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 876556789999987 55555332110 1111222 3565 777664 4555554
No 112
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.38 E-value=0.24 Score=48.73 Aligned_cols=180 Identities=7% Similarity=0.025 Sum_probs=103.2
Q ss_pred EEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCC
Q 019186 58 LCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPV 136 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~ 136 (345)
|++.. ....++.||+.++++..+...........-.++... ++.|++... ..+++||+.
T Consensus 420 lWigt--~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~------------------~Gl~~~~~~ 479 (795)
T 4a2l_A 420 VYIGT--HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL------------------SALVRFNPE 479 (795)
T ss_dssp EEEEE--TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES------------------SCEEEEETT
T ss_pred EEEEe--CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec------------------CceeEEeCC
Confidence 56543 234688999999988776532111111222333333 567777642 358999999
Q ss_pred CCCcccCCCC----CCC-ceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCC---C-ccCCCceeEEE
Q 019186 137 TRQWSPRASM----LVP-RAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDL---H-RTHNSACTGVV 206 (345)
Q Consensus 137 t~~W~~~~~~----~~~-r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~---~-~~~~~~~~~~~ 206 (345)
+++|+..... ... ..-.++.. -++.|++... . -+..||+.++++ ..... . .+ ......+.
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-------Gl~~~~~~~~~~-~~~~~~~~~~l~-~~~i~~i~ 549 (795)
T 4a2l_A 480 QRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-------GLSVFKQEGLDI-QKASILPVSNVT-KLFTNCIY 549 (795)
T ss_dssp TTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-------CEEEEEEETTEE-EECCCSCSCGGG-GSCEEEEE
T ss_pred CCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-------ceEEEeCCCCeE-EEecCCCCCCCC-CCeeEEEE
Confidence 9998776432 111 11122222 2567777543 2 288899988887 43211 1 11 11122222
Q ss_pred E--CCEEEEEecCcceEEEEECCCCCeeeccCC---CCCC--ceEE-EcCeEEEEeCcEEEEecCCc--eEEe
Q 019186 207 I--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYG---WLQG--PMAI-VHDSVYLMSHGLIIKQHRDV--RKVV 269 (345)
Q Consensus 207 ~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~---~~~~--~~~~-~~~~l~~~~~~~i~~~d~~~--W~~~ 269 (345)
. ++.|++.. ...+.+||+.+++++..... +... +++. -+|.|++.....+..|++++ ++..
T Consensus 550 ~d~~g~lWigT--~~Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~~~~~~~~~ 620 (795)
T 4a2l_A 550 EASNGIIWVGT--REGFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNPETEKFRNF 620 (795)
T ss_dssp ECTTSCEEEEE--SSCEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEETTEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEe--CCCceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcCCceEEEcCCCCcEEEc
Confidence 2 57788765 23799999999988765321 1111 1222 26789998888999999987 5544
No 113
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.36 E-value=0.51 Score=41.99 Aligned_cols=195 Identities=13% Similarity=0.038 Sum_probs=110.7
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
..+..+++.......+.... ..-.+++.. ++.||+.--. ...++++++.....+.+.
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~-----~~~~gl~~d~~~~~ly~~D~~----------------~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRELVFWSDVT----------------LDRILRANLNGSNVEEVV 154 (386)
T ss_dssp SCEEEECTTSCCCEEEECSC-----SCEEEEEEETTTTEEEEEETT----------------TTEEEEEETTSCCEEEEE
T ss_pred ccceeeccCCCcEEEEecCC-----CccEEEEEecCCCeEEEEeCC----------------CCcEEEEecCCCCcEEEE
Confidence 56777888776655543211 223345544 5789988532 357899999877654432
Q ss_pred CCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCc-c
Q 019186 145 SMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGL-S 219 (345)
Q Consensus 145 ~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~-~ 219 (345)
..... .-.++++ .++.||+.-.. .+.++++++....-+.+.. .......++++. ++.||+..-.. .
T Consensus 155 ~~~~~-~p~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~--~~l~~P~giavdp~~g~ly~td~~~~~ 225 (386)
T 3v65_B 155 STGLE-SPGGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLW--QSLEKPRAIALHPMEGTIYWTDWGNTP 225 (386)
T ss_dssp CSSCS-CCCCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred eCCCC-CccEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeec--CCCCCCcEEEEEcCCCeEEEeccCCCC
Confidence 21111 1123343 37899988542 2468888877554332211 110112233443 68899986433 7
Q ss_pred eEEEEECCCCCeeec-cCCCC-CCceEE--EcCeEEEEeC--cEEEEecCCc--eEEeccchhhcccceeEEEEECCeEE
Q 019186 220 TVQVLDHMGLGWTVE-DYGWL-QGPMAI--VHDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIY 291 (345)
Q Consensus 220 ~i~~yd~~~~~W~~~-~~~~~-~~~~~~--~~~~l~~~~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~ 291 (345)
.|+++++....-+.+ ..... +..+++ .+++||+.+. ..|+.+|.+. -+.+.... .....+++..++.||
T Consensus 226 ~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~---~~~P~giav~~~~ly 302 (386)
T 3v65_B 226 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLY 302 (386)
T ss_dssp EEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS---CSSEEEEEEETTEEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC---CCCceEEEEECCEEE
Confidence 899999875543333 22222 334444 3789999987 7899888765 22222111 123467777888999
Q ss_pred EEc
Q 019186 292 VIG 294 (345)
Q Consensus 292 i~G 294 (345)
+.-
T Consensus 303 ~td 305 (386)
T 3v65_B 303 WTD 305 (386)
T ss_dssp EEE
T ss_pred Eee
Confidence 874
No 114
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.33 E-value=0.072 Score=48.17 Aligned_cols=183 Identities=11% Similarity=-0.079 Sum_probs=91.5
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
+.+++.|+. ...+.++|..+++-..+...... ...-.+++.. ++.+++.|+.+ ..+.+|
T Consensus 132 ~~~lasGs~-dg~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~~~l~s~s~D----------------~~v~iw 192 (435)
T 4e54_B 132 PSTVAVGSK-GGDIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNTNQFYASSME----------------GTTRLQ 192 (435)
T ss_dssp TTCEEEEET-TSCEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCTTEEEEECSS----------------SCEEEE
T ss_pred CCEEEEEeC-CCEEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCCCEEEEEeCC----------------CEEEEe
Confidence 334444443 35788999877654332222211 0122234443 45666666642 357888
Q ss_pred eCCCCCcccCCCCCCCc-eeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--C-
Q 019186 134 DPVTRQWSPRASMLVPR-AMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G- 208 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r-~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~- 208 (345)
|..++....+....... ...++... ++.+++.|+.++ .+.+||..... +..+... ......+.. +
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~---~~~~~~h-~~~v~~v~~~p~~ 262 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG------NVILLNMDGKE---LWNLRMH-KKKVTHVALNPCC 262 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS------BEEEEESSSCB---CCCSBCC-SSCEEEEEECTTC
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC------cEeeeccCcce---eEEEecc-cceEEeeeecCCC
Confidence 98776544332222111 11222222 677777777553 48889986543 2222222 222223333 2
Q ss_pred CEEEEEecCcceEEEEECCCCCeeecc-C-CCCCCceEE----EcCeEEEEeC--cEEEEecCCceE
Q 019186 209 GKVHVLHKGLSTVQVLDHMGLGWTVED-Y-GWLQGPMAI----VHDSVYLMSH--GLIIKQHRDVRK 267 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~~~~W~~~~-~-~~~~~~~~~----~~~~l~~~~~--~~i~~~d~~~W~ 267 (345)
+.+++.|+....+..||+.+.+-...- . ......+.. .++..++.++ +.|..||..+|.
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred ceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 346667766677888998765432110 0 001111111 2455555544 678888877644
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.035 Score=54.38 Aligned_cols=95 Identities=8% Similarity=0.107 Sum_probs=57.0
Q ss_pred CceEEEeCCCCCcccCCCCCCCcee-eeeeEe-C--CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAM-FACCAL-K--EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT 203 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~-~~~~~~-~--~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 203 (345)
..+.+||..++++..+..+...... .+++.. + +..++.|+.++ .+.+||..+++|..+..+... .....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~~~~~~~~~~~~~~h-~~~V~ 103 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVH-SASVN 103 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEE
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC------eEEEEECCCCcccccccccCC-CCCeE
Confidence 3577888776666554443322222 233332 3 66777776553 389999999887665444433 22233
Q ss_pred EEEE--C--CEEEEEecCcceEEEEECCCC
Q 019186 204 GVVI--G--GKVHVLHKGLSTVQVLDHMGL 229 (345)
Q Consensus 204 ~~~~--~--~~iyv~gG~~~~i~~yd~~~~ 229 (345)
.+.. + +.++++|+....+..||..++
T Consensus 104 ~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 104 SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred EEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 3333 3 567777777788999998776
No 116
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.31 E-value=0.0012 Score=56.01 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=41.7
Q ss_pred CCCCChHHHHHHhhccCCCcchhhHHHhhHHHHHhhcChhhHHHHHh
Q 019186 4 LIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSPELFKARQE 50 (345)
Q Consensus 4 ~~~~lp~~~~~~~l~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 50 (345)
.+..||+|+++.|++.|+.++++++..||+.|+.+..++.+-+....
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~ 50 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLL 50 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHH
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHh
Confidence 46689999999999999999999999999999999999877665543
No 117
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.30 E-value=0.1 Score=48.88 Aligned_cols=231 Identities=14% Similarity=0.021 Sum_probs=112.5
Q ss_pred CcEEEEEecCCCCeEEEEeC--CCCCEEeCCCCCccccccceeEEEEE-----CCEEEEEcCCCCCCCCCCCCCCCCcCc
Q 019186 55 ENLLCVCAFDPENLWQLYDP--LRDLWITLPVLPSKIRHLAHFGVVST-----AGKLFVLGGGSDAVDPLTGDQDGSFAT 127 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~--~~~~W~~~~~~~~~~~~~~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~~~~~~ 127 (345)
+..+|+.+.. +.+.+||. .+.+ .+..++.. ..-..++.. +++..+++++ ..
T Consensus 190 g~~l~v~~~d--~~V~v~D~~~~t~~--~~~~i~~g---~~p~~va~sp~~~~dg~~l~v~~~---------------~~ 247 (543)
T 1nir_A 190 GRYLLVIGRD--ARIDMIDLWAKEPT--KVAEIKIG---IEARSVESSKFKGYEDRYTIAGAY---------------WP 247 (543)
T ss_dssp SCEEEEEETT--SEEEEEETTSSSCE--EEEEEECC---SEEEEEEECCSTTCTTTEEEEEEE---------------ES
T ss_pred CCEEEEECCC--CeEEEEECcCCCCc--EEEEEecC---CCcceEEeCCCcCCCCCEEEEEEc---------------cC
Confidence 5677776653 88999999 5543 22222221 122234443 4554334433 13
Q ss_pred CceEEEeCCCCCccc-CCCC----------CCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCC
Q 019186 128 NEVWSYDPVTRQWSP-RASM----------LVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLH 195 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~-~~~~----------~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~ 195 (345)
..+.++|..+.+-.+ ++.. +.++....+..- +..+|+.... ...+.++|..+..-..+...+
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------TGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------TTEEEEEECTTSSSCEEEEEE
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------CCeEEEEEecCCCcceeEEec
Confidence 568889987765322 1110 111211111222 3445544321 356889998764321111111
Q ss_pred ccCCCceeE-EEECCE-EEEEecCcceEEEEECCCCCeeec-c--CCCCC-CceEEE---cCeEEEEeC---cEEEEecC
Q 019186 196 RTHNSACTG-VVIGGK-VHVLHKGLSTVQVLDHMGLGWTVE-D--YGWLQ-GPMAIV---HDSVYLMSH---GLIIKQHR 263 (345)
Q Consensus 196 ~~~~~~~~~-~~~~~~-iyv~gG~~~~i~~yd~~~~~W~~~-~--~~~~~-~~~~~~---~~~l~~~~~---~~i~~~d~ 263 (345)
.. ...+.+ +.-+++ +|+.+...+.+..+|.++++-... . ..+.. ...... ++.+|+.+. ..|..+|.
T Consensus 322 ~~-~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 322 AA-PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp CC-SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEEC
T ss_pred cC-cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEe
Confidence 12 111222 223555 666554567899999998865432 2 11221 122222 367887753 67777776
Q ss_pred Cc-------eEEeccchhhcccceeEEEEECC-eEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 264 DV-------RKVVASASEFRRRIGFAMIGMGD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 264 ~~-------W~~~~~~p~~~~r~~~~~~~~~~-~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
++ |+.+..++.......+....-++ .||+-.-.+.. .+.-+.|.+||.++.
T Consensus 401 ~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~------~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 401 DPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPD------ARISQSVAVFDLKNL 459 (543)
T ss_dssp CTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSS------HHHHTCEEEEETTCT
T ss_pred CCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCC------cccCceEEEEECCCC
Confidence 65 99888776321111121122244 45543211110 012357899999876
No 118
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.30 E-value=0.39 Score=39.97 Aligned_cols=215 Identities=7% Similarity=-0.084 Sum_probs=115.9
Q ss_pred CeEEEEeCCCCCEEeCCCCCcc-ccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSK-IRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPR 143 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~-~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~ 143 (345)
..++.+|......+.....+.. .+...-++++.. ++.||+.... ...++++++.++.-..+
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~----------------~~~I~~~~~~g~~~~~~ 73 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS----------------EPSIGRASLHGGEPTTI 73 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT----------------TTEEEEEESSSCCCEEE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC----------------CCEEEEEecCCCCcEEE
Confidence 4678888776544322111100 000122345554 5789988642 35799999976643222
Q ss_pred CCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecC--
Q 019186 144 ASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKG-- 217 (345)
Q Consensus 144 ~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~-- 217 (345)
..... ..-+++++- ++.||+.... .+.+.++|+....-+.+..... .....++.. ++.||+....
T Consensus 74 ~~~~~-~~p~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~~--~~P~~i~vd~~~g~lyv~~~~~~ 144 (267)
T 1npe_A 74 IRQDL-GSPEGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQRRVLFDTGL--VNPRGIVTDPVRGNLYWTDWNRD 144 (267)
T ss_dssp ECTTC-CCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSC--SSEEEEEEETTTTEEEEEECCSS
T ss_pred EECCC-CCccEEEEEecCCeEEEEECC------CCEEEEEEcCCCCEEEEEECCC--CCccEEEEeeCCCEEEEEECCCC
Confidence 11111 122344443 5789988542 3468899987543332211111 112233333 6889998743
Q ss_pred cceEEEEECCCCCeeeccC--CCCCCceEEE--cCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEEEECCeEE
Q 019186 218 LSTVQVLDHMGLGWTVEDY--GWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIY 291 (345)
Q Consensus 218 ~~~i~~yd~~~~~W~~~~~--~~~~~~~~~~--~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~ 291 (345)
...++++++....-+.+.. ...+..++.- ++.||+.+. ..|..+|.+.-......+ ......+++.-++.||
T Consensus 145 ~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~~~~P~gi~~d~~~ly 222 (267)
T 1npe_A 145 NPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE--GLQYPFAVTSYGKNLY 222 (267)
T ss_dssp SCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE--CCCSEEEEEEETTEEE
T ss_pred CcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec--CCCCceEEEEeCCEEE
Confidence 4688899886544333321 1113334443 568999987 789999987611111111 1122346666688899
Q ss_pred EEcceecCCCCcccccccCceeeeccCCC
Q 019186 292 VIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 292 i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.-. ..+.|.++|+.+.
T Consensus 223 va~~------------~~~~v~~~d~~~g 239 (267)
T 1npe_A 223 YTDW------------KTNSVIAMDLAIS 239 (267)
T ss_dssp EEET------------TTTEEEEEETTTT
T ss_pred EEEC------------CCCeEEEEeCCCC
Confidence 8632 1137889999876
No 119
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.25 E-value=0.22 Score=48.26 Aligned_cols=195 Identities=9% Similarity=-0.010 Sum_probs=104.8
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCC----Cc
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR----QW 140 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~----~W 140 (345)
..+..++..+.+...+.... ..-+++++. ++.||+.--. ...++++++.+. .-
T Consensus 386 ~~I~~id~~~~~~~~~~~~~-----~~p~gla~d~~~~~Ly~sD~~----------------~~~I~~~~~~g~~~~~~~ 444 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDLS----------------QRMICSTQLDRAHGVSSY 444 (699)
T ss_dssp TC-CEECTTSCCEECCSCCC-----TTCCCCEEETTTTEEEECCTT----------------TTSBEEEESCCCCC-CCC
T ss_pred cceEEEeCCCCcceeeeccC-----cceEEEccccccCeEEEEecC----------------CCeEEEEecCCCCCCcce
Confidence 46777888777766553322 122344444 5788887432 346888988751 11
Q ss_pred ccCCCCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCC--CCccCCCceeEEE--ECCEEEEE
Q 019186 141 SPRASMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPD--LHRTHNSACTGVV--IGGKVHVL 214 (345)
Q Consensus 141 ~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~--~~~~~~~~~~~~~--~~~~iyv~ 214 (345)
..+.... ...-.++++ .++.||+.-.. ...+.++|+....-+.+.. +..+ .++++ .++.||+.
T Consensus 445 ~~~i~~~-~~~P~glavD~~~g~LY~tD~~------~~~I~v~d~dg~~~~~l~~~~~~~P----~giavDp~~g~ly~t 513 (699)
T 1n7d_A 445 DTVISRD-IQAPDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFREQGSKP----RAIVVDPVHGFMYWT 513 (699)
T ss_dssp CCBCCSC-C--CCCEECCCSSSBCEECCTT------TSCEEEEBSSSCCEEEECCCSSCCC----CCEECCSSSSCCEEC
T ss_pred EEEEeCC-CCCcceEEEEeeCCcEEEEecc------CCeEEEEecCCCceEEEEeCCCCCc----ceEEEccCCCcEEEc
Confidence 1111100 111123333 46789887432 3458999987765443322 2222 22333 36788887
Q ss_pred ec-CcceEEEEECCCCCeeecc-C-CCCCCceEEE--cCeEEEEeC--cEEEEecCCc--eEEeccchhhcccceeEEEE
Q 019186 215 HK-GLSTVQVLDHMGLGWTVED-Y-GWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIG 285 (345)
Q Consensus 215 gG-~~~~i~~yd~~~~~W~~~~-~-~~~~~~~~~~--~~~l~~~~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~ 285 (345)
.- ....|+++++....-+.+. . ...+..+++- +++||+.+. ..|..++.+. -+.+...+. ......+++.
T Consensus 514 d~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~-~~~~P~glav 592 (699)
T 1n7d_A 514 DWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-RLAHPFSLAV 592 (699)
T ss_dssp CCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSS-SCSSCCCCEE
T ss_pred ccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCC-cCCCceEeEE
Confidence 52 3367888887654333322 1 2123445543 689999987 6888888765 333322110 1123356677
Q ss_pred ECCeEEEEc
Q 019186 286 MGDDIYVIG 294 (345)
Q Consensus 286 ~~~~l~i~G 294 (345)
.++.||+.-
T Consensus 593 d~~~lywtd 601 (699)
T 1n7d_A 593 FEDKVFWTD 601 (699)
T ss_dssp ETTEEEEEC
T ss_pred ECCEEEEEe
Confidence 788888874
No 120
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.23 E-value=0.032 Score=49.05 Aligned_cols=96 Identities=19% Similarity=0.152 Sum_probs=47.4
Q ss_pred CceEEEeCCCCCcccCCCCCCCcee-eeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCc-eEeCCCCCccCCCceeE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAM-FACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDV-WVPIPDLHRTHNSACTG 204 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~ 204 (345)
..+.+||..++.|+.+..+...... .+++.. ++..++.|+.++ .+.+||..+.. |.....+... ......
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~~~~~-~~~v~~ 105 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDGTWKQTLVLLRL-NRAATF 105 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS------SEEEC------CCCCEEECCCC-SSCEEE
T ss_pred CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCCceeeeeEeccc-CCceEE
Confidence 3577888888877666655433322 223332 456666666442 48899988876 4433222222 112222
Q ss_pred EEE--CCEEEEEecCcceEEEEECCCCC
Q 019186 205 VVI--GGKVHVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 205 ~~~--~~~iyv~gG~~~~i~~yd~~~~~ 230 (345)
+.. ++++++.|+....+..||..+++
T Consensus 106 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp EECCTTSSCCEEEESSSCEEECCC----
T ss_pred EEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 222 56666676666778889887764
No 121
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.21 E-value=0.092 Score=46.26 Aligned_cols=181 Identities=8% Similarity=-0.142 Sum_probs=93.2
Q ss_pred EEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEEC--CEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 57 LLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTA--GKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 57 ~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
.+++.|+. ...+.+||..+++.......... ...-.+++... +.+++.|+. ...+.+||
T Consensus 87 ~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~----------------d~~i~iwd 147 (383)
T 3ei3_B 87 TTVAVGSK-GGDIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQLFVSSI----------------RGATTLRD 147 (383)
T ss_dssp TEEEEEEB-TSCEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEEEEEEET----------------TTEEEEEE
T ss_pred CEEEEEcC-CCeEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCEEEEEeC----------------CCEEEEEE
Confidence 34444432 35788999988876554332111 12233444444 356666654 24688899
Q ss_pred CCCCCcccCCCCCCC-ceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCE
Q 019186 135 PVTRQWSPRASMLVP-RAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGK 210 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~-r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~ 210 (345)
..++....+...... ..-.+++.. ++..++.|+.+ ..+.+||.....-..+.. . ......+.. ++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~---h-~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 148 FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKL---H-KAKVTHAEFNPRCD 217 (383)
T ss_dssp TTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEEC---S-SSCEEEEEECSSCT
T ss_pred CCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEecc---C-CCcEEEEEECCCCC
Confidence 886554443322211 111222222 56666666544 358999985443333321 1 112222222 344
Q ss_pred -EEEEecCcceEEEEECCC----CCeeeccCCCC-CCceEE-E-cCeEEEEeC--cEEEEecCCce
Q 019186 211 -VHVLHKGLSTVQVLDHMG----LGWTVEDYGWL-QGPMAI-V-HDSVYLMSH--GLIIKQHRDVR 266 (345)
Q Consensus 211 -iyv~gG~~~~i~~yd~~~----~~W~~~~~~~~-~~~~~~-~-~~~l~~~~~--~~i~~~d~~~W 266 (345)
+++.|+....+..||+.+ ........... ...++. . ++.+++.++ +.+..||..++
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 677776777899999876 33322111111 111222 2 455555554 78888887763
No 122
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.11 Score=45.07 Aligned_cols=217 Identities=11% Similarity=0.035 Sum_probs=102.0
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccC-
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPR- 143 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~- 143 (345)
...+.+||..+++....-... ..-.+++.. ++..++.++..... ....+.+||..+..-...
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~~~~-----------~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWKSP-----VPVKRVEFSPCGNYFLAILDNVMK-----------NPGSINIYEIERDSATHEL 158 (369)
T ss_dssp TTEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSSEEEEEECCBTT-----------BCCEEEEEEEEECTTTCCE
T ss_pred CCeEEEEECCCCcEEEEeecC-----CCeEEEEEccCCCEEEEecCCccC-----------CCCEEEEEEecCCccceee
Confidence 457889998887654432222 122233333 45555555432100 124677777765532110
Q ss_pred ---CCCC-----CCc---eeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCC-ceE-eCCCCCccCCCceeEEEE--
Q 019186 144 ---ASML-----VPR---AMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKD-VWV-PIPDLHRTHNSACTGVVI-- 207 (345)
Q Consensus 144 ---~~~~-----~~r---~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~-~W~-~~~~~~~~~~~~~~~~~~-- 207 (345)
...+ ... ...+++. -++..++.|+.+ ..+.+||..+. .-. .+.. . ......+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~---~-~~~v~~~~~~~ 228 (369)
T 3zwl_B 159 TKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD------GKISKYDVSNNYEYVDSIDL---H-EKSISDMQFSP 228 (369)
T ss_dssp EEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT------SEEEEEETTTTTEEEEEEEC---C-SSCEEEEEECT
T ss_pred cccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC------CEEEEEECCCCcEeEEEEec---C-CCceeEEEECC
Confidence 0000 000 1112222 255566666543 35899999873 322 2211 1 111222222
Q ss_pred CCEEEEEecCcceEEEEECCCCCeeeccCCCC--CCceEEEcCeEEEEeC--c--------------EEEEecCCceEEe
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL--QGPMAIVHDSVYLMSH--G--------------LIIKQHRDVRKVV 269 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~--~~~~~~~~~~l~~~~~--~--------------~i~~~d~~~W~~~ 269 (345)
++..++.++....+..||..+.+-...-.... .......++..++.++ + .+..+|..+.+.+
T Consensus 229 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 229 DLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred CCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 56666666667789999998775433211111 1111112344444433 2 6777777664444
Q ss_pred ccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 270 ASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 270 ~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
..+.............-++++++.|+.++ .|.+||++.+
T Consensus 309 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg------------~v~iw~~~~~ 347 (369)
T 3zwl_B 309 GRVQGHFGPLNTVAISPQGTSYASGGEDG------------FIRLHHFEKS 347 (369)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTS------------EEEEEEECHH
T ss_pred hheecccCcEEEEEECCCCCEEEEEcCCC------------eEEEEECccc
Confidence 33321112221211222677777776443 5677887665
No 123
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.19 E-value=0.5 Score=40.16 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=21.0
Q ss_pred CCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCC
Q 019186 287 GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMT 331 (345)
Q Consensus 287 ~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~ 331 (345)
++++++.|+.++ .|.+||+++++ .|..+..++
T Consensus 317 ~~~~l~s~~~dg------------~v~iw~~~~~~-~~~~~~~~~ 348 (351)
T 3f3f_A 317 TGTILSSAGDDG------------KVRLWKATYSN-EFKCMSVIT 348 (351)
T ss_dssp SSCCEEEEETTS------------CEEEEEECTTS-CEEEEEEEC
T ss_pred CCCEEEEecCCC------------cEEEEecCcCc-chhheeehc
Confidence 566777776443 57888887642 677776554
No 124
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.15 E-value=0.59 Score=40.63 Aligned_cols=108 Identities=7% Similarity=-0.099 Sum_probs=53.7
Q ss_pred CC-EEEEEecCcceEEEEECCCCCeeeccCC---CC----CCceEE-EcCe-EEEEeC---cEEEEecCC--c--eEEec
Q 019186 208 GG-KVHVLHKGLSTVQVLDHMGLGWTVEDYG---WL----QGPMAI-VHDS-VYLMSH---GLIIKQHRD--V--RKVVA 270 (345)
Q Consensus 208 ~~-~iyv~gG~~~~i~~yd~~~~~W~~~~~~---~~----~~~~~~-~~~~-l~~~~~---~~i~~~d~~--~--W~~~~ 270 (345)
++ .+|+.+...+.+..||..+++...+... +. ...++. .+|+ ||+.+. +.+..|+.+ + ++.+.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEee
Confidence 45 5777764567889999887766443221 11 112222 2554 666553 455565543 2 65665
Q ss_pred cchhhcccceeEEEE-ECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcC
Q 019186 271 SASEFRRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVS 328 (345)
Q Consensus 271 ~~p~~~~r~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~ 328 (345)
.++. ......++. -+++.+++++..... -.+|.+|++++ +-..+.
T Consensus 301 ~~~~--g~~~~~~~~spdg~~l~~~~~~~~~---------v~v~~~d~~~g--~~~~~~ 346 (361)
T 3scy_A 301 YQLT--GIHPRNFIITPNGKYLLVACRDTNV---------IQIFERDQATG--LLTDIK 346 (361)
T ss_dssp EEEC--SSCCCEEEECTTSCEEEEEETTTTE---------EEEEEECTTTC--CEEECS
T ss_pred EecC--CCCCceEEECCCCCEEEEEECCCCC---------EEEEEEECCCC--cEeecc
Confidence 5442 111123332 355544444322211 13455677777 555554
No 125
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.14 E-value=0.24 Score=43.84 Aligned_cols=186 Identities=9% Similarity=-0.075 Sum_probs=90.9
Q ss_pred cEEEEEecCCCCeEEEEeCCCCC------EE-eCCCCCccccccceeEEEEEC--CEEEEEcCCCCCCCCCCCCCCCCcC
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDL------WI-TLPVLPSKIRHLAHFGVVSTA--GKLFVLGGGSDAVDPLTGDQDGSFA 126 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~------W~-~~~~~~~~~~~~~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~~~~~~ 126 (345)
+.+++.|+ ....+.+||..+.+ -. .+...... ...-.+++... +.+++.|+.
T Consensus 126 ~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~---------------- 186 (416)
T 2pm9_A 126 DNVLASGG-NNGEIFIWDMNKCTESPSNYTPLTPGQSMSS--VDEVISLAWNQSLAHVFASAGS---------------- 186 (416)
T ss_dssp TTBEEEEC-SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS--SCCCCEEEECSSCTTEEEEESS----------------
T ss_pred CCEEEEEc-CCCeEEEEECCCCccccccccccccccccCC--CCCeeEEEeCCCCCcEEEEEcC----------------
Confidence 33444443 23568888887764 11 11111111 11222344442 467777764
Q ss_pred cCceEEEeCCCCCcccCCCCCC-----CceeeeeeEe-C-CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCC-ccC
Q 019186 127 TNEVWSYDPVTRQWSPRASMLV-----PRAMFACCAL-K-EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLH-RTH 198 (345)
Q Consensus 127 ~~~~~~yd~~t~~W~~~~~~~~-----~r~~~~~~~~-~-~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~~ 198 (345)
...+.+||..+.+-...-.... ...-.+++.. + ..+++.++.++. ...+.+||..+..- .+..+. ..
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~~~~~~-~~~~~~~~~- 261 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDLRNANT-PLQTLNQGH- 261 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEETTSTTS-CSBCCCSCC-
T ss_pred CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeCCCCCC-CcEEeecCc-
Confidence 2468899998765432211111 1112233333 3 356666654421 12588999887531 112222 11
Q ss_pred CCceeEEEE---CCEEEEEecCcceEEEEECCCCCeee-ccCCCC-CCceEE-EcC-eEEEEeC--cEEEEecCCc
Q 019186 199 NSACTGVVI---GGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWL-QGPMAI-VHD-SVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 199 ~~~~~~~~~---~~~iyv~gG~~~~i~~yd~~~~~W~~-~~~~~~-~~~~~~-~~~-~l~~~~~--~~i~~~d~~~ 265 (345)
......+.. ++.+++.|+....+..||+.+.+-.. +..... ...++. .++ .+++.++ +.+..+|..+
T Consensus 262 ~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 262 QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 122223333 56777777777889999988765432 211111 122222 234 5666655 6777777654
No 126
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.11 E-value=0.39 Score=41.08 Aligned_cols=134 Identities=10% Similarity=0.030 Sum_probs=68.7
Q ss_pred CCeEEEEeCCCCC----EEeCCCCCccccccceeEEEEE-CCE-EEEEcCCCCCCCCCCCCCCCCcCcCceEEEeC-CCC
Q 019186 66 ENLWQLYDPLRDL----WITLPVLPSKIRHLAHFGVVST-AGK-LFVLGGGSDAVDPLTGDQDGSFATNEVWSYDP-VTR 138 (345)
Q Consensus 66 ~~~~~~yd~~~~~----W~~~~~~~~~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~-~t~ 138 (345)
...+.+||..+++ ...+.... ..-.+++.. ++. .++.|+. ...+.+||. .++
T Consensus 32 d~~v~iw~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~----------------dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 32 DGSLTVYKFDIQAKNVDLLQSLRYK-----HPLLCCNFIDNTDLQIYVGTV----------------QGEILKVDLIGSP 90 (342)
T ss_dssp TSEEEEEEEETTTTEEEEEEEEECS-----SCEEEEEEEESSSEEEEEEET----------------TSCEEEECSSSSS
T ss_pred CCeEEEEEeCCCCccccceeeeecC-----CceEEEEECCCCCcEEEEEcC----------------CCeEEEEEeccCC
Confidence 3578888887765 33222111 122233333 566 6666664 246889998 877
Q ss_pred CcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCc-------eEeCCCCCccCCCceeEEEECCEE
Q 019186 139 QWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDV-------WVPIPDLHRTHNSACTGVVIGGKV 211 (345)
Q Consensus 139 ~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~-------W~~~~~~~~~~~~~~~~~~~~~~i 211 (345)
+...+........-.+++...+..++.++.+ ..+.+||..+.. .+.+..+... ..-.++....+.
T Consensus 91 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~- 162 (342)
T 1yfq_A 91 SFQALTNNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKVK-NKIFTMDTNSSR- 162 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSSC-CCEEEEEECSSE-
T ss_pred ceEeccccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEeeC-CceEEEEecCCc-
Confidence 6544433111111222333325555555543 348888876400 2222233322 222333344555
Q ss_pred EEEecCcceEEEEECCC
Q 019186 212 HVLHKGLSTVQVLDHMG 228 (345)
Q Consensus 212 yv~gG~~~~i~~yd~~~ 228 (345)
+++++....+..||..+
T Consensus 163 l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp EEEEESTTEEEEEESSC
T ss_pred EEEEeCCCeEEEEECCc
Confidence 55555677899999987
No 127
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.09 E-value=0.14 Score=44.75 Aligned_cols=171 Identities=10% Similarity=0.024 Sum_probs=84.4
Q ss_pred CceEEEeCCCCCcccCCCCC---CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee
Q 019186 128 NEVWSYDPVTRQWSPRASML---VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT 203 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~---~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 203 (345)
..+.+||..+++-....... ....-.+++.. +++.++.|+.++ .+.+||.++.+-.. .+... .....
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~------~i~iwd~~~~~~~~--~~~~h-~~~V~ 173 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI------CIKVWDLAQQVVLS--SYRAH-AAQVT 173 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEE--EECCC-SSCEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECCCCcEEE--EEcCc-CCceE
Confidence 46888998876532221110 11111222222 667777776543 38999998875322 12211 11122
Q ss_pred EEEE--C-CEEEEEecCcceEEEEECCCCCeeec-cCCCCCC---ceEE--EcCeEEEEeC--cEEEEecCCceEEeccc
Q 019186 204 GVVI--G-GKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQG---PMAI--VHDSVYLMSH--GLIIKQHRDVRKVVASA 272 (345)
Q Consensus 204 ~~~~--~-~~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~~~---~~~~--~~~~l~~~~~--~~i~~~d~~~W~~~~~~ 272 (345)
.+.. + ..+++.|+.-..+..+|.++.+-... ....... .++. .++.+++.++ +.|..+|..+.+.+..+
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~ 253 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS 253 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE
T ss_pred EEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE
Confidence 2222 3 34777776677899999987764332 1111111 1111 1456766665 68888888774444333
Q ss_pred hhhcccceeEEEEE-CC-eEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 273 SEFRRRIGFAMIGM-GD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 273 p~~~~r~~~~~~~~-~~-~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
....... .+++.. ++ ++++.|+.++ .|.+||..+.
T Consensus 254 ~~h~~~v-~~v~fsp~g~~~lasgs~D~------------~i~vwd~~~~ 290 (344)
T 4gqb_B 254 AVHSQCV-TGLVFSPHSVPFLASLSEDC------------SLAVLDSSLS 290 (344)
T ss_dssp ECCSSCE-EEEEECSSSSCCEEEEETTS------------CEEEECTTCC
T ss_pred cCCCCCE-EEEEEccCCCeEEEEEeCCC------------eEEEEECCCC
Confidence 2111111 122222 33 4566665332 4677887765
No 128
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.08 E-value=0.6 Score=40.17 Aligned_cols=105 Identities=9% Similarity=0.032 Sum_probs=54.5
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
+.+++.|+. ...+.+||..+++-... +... ...-.+++.. ++.+++.|+. ...+.+|
T Consensus 85 ~~~l~~~~~-dg~i~v~d~~~~~~~~~--~~~~--~~~i~~~~~~~~~~~~l~s~~~----------------dg~i~iw 143 (366)
T 3k26_A 85 HPLLAVAGS-RGIIRIINPITMQCIKH--YVGH--GNAINELKFHPRDPNLLLSVSK----------------DHALRLW 143 (366)
T ss_dssp CEEEEEEET-TCEEEEECTTTCCEEEE--EESC--CSCEEEEEECSSCTTEEEEEET----------------TSCEEEE
T ss_pred CCEEEEecC-CCEEEEEEchhceEeee--ecCC--CCcEEEEEECCCCCCEEEEEeC----------------CCeEEEE
Confidence 345555543 35789999887653221 1111 0222234443 4567777764 2468899
Q ss_pred eCCCCCcccC-CCCCCCce-eeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCc
Q 019186 134 DPVTRQWSPR-ASMLVPRA-MFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDV 187 (345)
Q Consensus 134 d~~t~~W~~~-~~~~~~r~-~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~ 187 (345)
|..+++-... ..+..... -.+++.. ++..++.|+.++ .+.+||..+.+
T Consensus 144 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~ 194 (366)
T 3k26_A 144 NIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH------SLKLWRINSKR 194 (366)
T ss_dssp ETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS------CEEEEESCSHH
T ss_pred EeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC------CEEEEECCCCc
Confidence 9987653322 11111111 2222222 456666666543 48889987653
No 129
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.05 E-value=0.51 Score=39.78 Aligned_cols=183 Identities=9% Similarity=-0.030 Sum_probs=100.3
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+.+. ....++.||+.++ .+.+.... ..-.+++.. ++++|+.... ...+++|
T Consensus 39 g~~l~~~~~-~~~~i~~~~~~~~-~~~~~~~~-----~~~~~l~~~~dg~l~v~~~~----------------~~~i~~~ 95 (296)
T 3e5z_A 39 RSAVIFSDV-RQNRTWAWSDDGQ-LSPEMHPS-----HHQNGHCLNKQGHLIACSHG----------------LRRLERQ 95 (296)
T ss_dssp GTEEEEEEG-GGTEEEEEETTSC-EEEEESSC-----SSEEEEEECTTCCEEEEETT----------------TTEEEEE
T ss_pred CCEEEEEeC-CCCEEEEEECCCC-eEEEECCC-----CCcceeeECCCCcEEEEecC----------------CCeEEEE
Confidence 344666653 2457899999987 65543211 122344443 6778877532 2469999
Q ss_pred eCCCCCcccCCCCCCCc---eeeeeeE-eCCeEEEE----cCcC------C-CCCCCceEEEEeCCCCceEeCCCCCccC
Q 019186 134 DPVTRQWSPRASMLVPR---AMFACCA-LKEKIVVA----GGFT------S-CRKSISQAEMYDPEKDVWVPIPDLHRTH 198 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r---~~~~~~~-~~~~iyv~----gG~~------~-~~~~~~~v~~yd~~~~~W~~~~~~~~~~ 198 (345)
|+.+++.+.+....... .-..+++ -++++|+. |... . .......++.||+. .+...+.. .
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~---~- 170 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR---D- 170 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC---C-
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec---C-
Confidence 99888766543211111 0112222 36788886 3211 0 01113478899887 55444321 1
Q ss_pred CCceeEEEE--CCEEEEEecCcceEEEEECC-CCCe-e--eccCCCC--CCceEE-EcCeEEEEeCcEEEEecCCc
Q 019186 199 NSACTGVVI--GGKVHVLHKGLSTVQVLDHM-GLGW-T--VEDYGWL--QGPMAI-VHDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 199 ~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~-~~~W-~--~~~~~~~--~~~~~~-~~~~l~~~~~~~i~~~d~~~ 265 (345)
......+.. ++++++.......+++||+. +++. . .+-.... ...++. .+|+||+..+..+..|+++.
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g 246 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDG 246 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTTS
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCCC
Confidence 112223333 56666655456789999986 4555 1 1111111 223333 47889998888999999875
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.04 E-value=0.096 Score=44.97 Aligned_cols=183 Identities=8% Similarity=0.014 Sum_probs=86.3
Q ss_pred CcEEEEEecCCCCeEEEEeCC-CCCEEeCCCCCccccccceeEEEEE-CCE-EEEEcCCCCCCCCCCCCCCCCcCcCceE
Q 019186 55 ENLLCVCAFDPENLWQLYDPL-RDLWITLPVLPSKIRHLAHFGVVST-AGK-LFVLGGGSDAVDPLTGDQDGSFATNEVW 131 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~-~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~~ 131 (345)
+..+|+.++ ....+.+||.. +++.+.+...+.. ..-..++.. +++ ||+.+.. ...+.
T Consensus 4 ~~~l~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~----------------~~~v~ 63 (343)
T 1ri6_A 4 KQTVYIASP-ESQQIHVWNLNHEGALTLTQVVDVP---GQVQPMVVSPDKRYLYVGVRP----------------EFRVL 63 (343)
T ss_dssp EEEEEEEEG-GGTEEEEEEECTTSCEEEEEEEECS---SCCCCEEECTTSSEEEEEETT----------------TTEEE
T ss_pred eEEEEEeCC-CCCeEEEEEECCCCcEEEeeeEecC---CCCceEEECCCCCEEEEeecC----------------CCeEE
Confidence 455666643 34678888874 4555544332221 111223333 444 6655432 13566
Q ss_pred EEeCC--CCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCCCCc-eEeCCCCCccCCCceeE-E
Q 019186 132 SYDPV--TRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPEKDV-WVPIPDLHRTHNSACTG-V 205 (345)
Q Consensus 132 ~yd~~--t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~-~ 205 (345)
+|+.. +++++.+..++....-..++.. ++ .+|+.+... ..+.+||..... ...+...... .....+ .
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~ 136 (343)
T 1ri6_A 64 AYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGL-DGCHSANI 136 (343)
T ss_dssp EEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCC-TTBCCCEE
T ss_pred EEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCC-CCceEEEE
Confidence 66665 6676655433322222223332 44 466554322 347888874221 2222212211 111122 2
Q ss_pred EECC-EEEEEecCcceEEEEECCC-CCeeecc-----C--CCCCCceEE-EcCe-EEEEeC--cEEEEecCC
Q 019186 206 VIGG-KVHVLHKGLSTVQVLDHMG-LGWTVED-----Y--GWLQGPMAI-VHDS-VYLMSH--GLIIKQHRD 264 (345)
Q Consensus 206 ~~~~-~iyv~gG~~~~i~~yd~~~-~~W~~~~-----~--~~~~~~~~~-~~~~-l~~~~~--~~i~~~d~~ 264 (345)
.-++ .+|+.+.....+..||+.+ ++..... . ......++. .+++ +|+.+. +.+..|+.+
T Consensus 137 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 2233 5777663467799999887 6664321 1 101111222 2444 777764 677777763
No 131
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.02 E-value=0.34 Score=46.71 Aligned_cols=108 Identities=17% Similarity=0.208 Sum_probs=71.7
Q ss_pred eeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCccC-------CCceeEEEECCEEEEEecCcceEEEE
Q 019186 154 ACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHRTH-------NSACTGVVIGGKVHVLHKGLSTVQVL 224 (345)
Q Consensus 154 ~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~-------~~~~~~~~~~~~iyv~gG~~~~i~~y 224 (345)
+-++.++.||+.... ..+..+|.++.+ |+.-...+... ....+.+..+++||+.. ....++++
T Consensus 72 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~-~dg~l~al 143 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA-WDGRLIAL 143 (677)
T ss_dssp CCEEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC-TTSEEEEE
T ss_pred CCEEECCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc-CCCEEEEE
Confidence 445679999998652 358999988774 88644332110 11234456789998875 45789999
Q ss_pred ECCCC--CeeeccC-C-----CCCCceEEEcCeEEEEeC-------cEEEEecCCc----eEEe
Q 019186 225 DHMGL--GWTVEDY-G-----WLQGPMAIVHDSVYLMSH-------GLIIKQHRDV----RKVV 269 (345)
Q Consensus 225 d~~~~--~W~~~~~-~-----~~~~~~~~~~~~l~~~~~-------~~i~~~d~~~----W~~~ 269 (345)
|.+++ .|+.-.. . ....+.++.++.+|+... +.++.||.++ |+.-
T Consensus 144 D~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 144 DAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp ETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 99877 4876433 1 123445567888888753 6899999876 8764
No 132
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.00 E-value=1.3 Score=43.39 Aligned_cols=194 Identities=8% Similarity=0.001 Sum_probs=107.8
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCC----Cc
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR----QW 140 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~----~W 140 (345)
..+..++.....+..+.... ..-.++++. +++||+.-.. ...++++++... ..
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~-----~~~~gl~~d~~~~~lY~sD~~----------------~~~I~~~~l~g~~~~~~~ 462 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDLS----------------QRMICSTQLDRAHGVSSY 462 (791)
T ss_dssp SSEEEECTTSCCCEEEECSC-----SSEEEEEEETTTTEEEEEETT----------------TTEEEEEEC--------C
T ss_pred cceeEeeccCCcceeeecCC-----CceEEEeecccCCeeEEeecc----------------ceeEEEEeccCCCCCcce
Confidence 45667777766665553221 223345554 5789988643 346788887642 12
Q ss_pred ccCCCCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC--CCCccCCCceeEEEE--CCEEEEE
Q 019186 141 SPRASMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGVVI--GGKVHVL 214 (345)
Q Consensus 141 ~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~--~~~iyv~ 214 (345)
..+..... ..-.++++ .+++||+.-.. ...|+++++....-+.+. .+..+ .++++. ++.||+.
T Consensus 463 ~~vi~~~l-~~P~GLAvD~~~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~~l~~P----~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 463 DTVISRDI-QAPDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP----RAIVVDPVHGFMYWT 531 (791)
T ss_dssp EEEECSSC-SCCCEEEEETTTTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCE----EEEEEETTTTEEEEE
T ss_pred eEEEecCC-CCcceeeeeecCCcEEEEecC------CCeEEEEeCCCCeEEEEEeCCCCCc----ceEEEecCCCCEEEe
Confidence 22111011 11123443 46799998532 356999998866544442 22222 233332 5899998
Q ss_pred e-cCcceEEEEECCCCCeeeccC-CCC-CCceEEE--cCeEEEEeC--cEEEEecCCc---eEEeccchhhcccceeEEE
Q 019186 215 H-KGLSTVQVLDHMGLGWTVEDY-GWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV---RKVVASASEFRRRIGFAMI 284 (345)
Q Consensus 215 g-G~~~~i~~yd~~~~~W~~~~~-~~~-~~~~~~~--~~~l~~~~~--~~i~~~d~~~---W~~~~~~p~~~~r~~~~~~ 284 (345)
. |....|+++++....-..+.. ... +..+++- +++||+.+. ..|..++.+. .+.+.... .-....+++
T Consensus 532 D~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~--~l~~P~gla 609 (791)
T 3m0c_C 532 DWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK--RLAHPFSLA 609 (791)
T ss_dssp ECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT--TTSSEEEEE
T ss_pred cCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCC--ccCCCCEEE
Confidence 6 344789999987654433322 212 3344443 689999987 6888888765 33322110 112345777
Q ss_pred EECCeEEEEc
Q 019186 285 GMGDDIYVIG 294 (345)
Q Consensus 285 ~~~~~l~i~G 294 (345)
..+++||+.-
T Consensus 610 v~~~~lYwtD 619 (791)
T 3m0c_C 610 VFEDKVFWTD 619 (791)
T ss_dssp EETTEEEEEE
T ss_pred EeCCEEEEEE
Confidence 8899999874
No 133
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.99 E-value=0.73 Score=40.33 Aligned_cols=194 Identities=13% Similarity=0.042 Sum_probs=112.8
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPR 143 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~ 143 (345)
...+..+++...+...+.... ..-.+++.. ++.||+.--. ...++++++....-+.+
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~-----~~~~~l~~d~~~~~ly~~D~~----------------~~~I~r~~~~g~~~~~~ 110 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRELVFWSDVT----------------LDRILRANLNGSNVEEV 110 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSC-----SCEEEEEEETTTTEEEEEETT----------------TTEEEEEETTSCSCEEE
T ss_pred ccceEEEeCCCCeeEEeecCC-----CceEEEEEeccccEEEEEecc----------------CCceEEEecCCCCceEE
Confidence 356888888887766553221 122345544 5789988532 35789999987654443
Q ss_pred CCCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC--CCCccCCCceeEEEE--CCEEEEEecC
Q 019186 144 ASMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGVVI--GGKVHVLHKG 217 (345)
Q Consensus 144 ~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~--~~~iyv~gG~ 217 (345)
...... .-.++++ .++.||+.-.. .+.++++++....-+.+. .+..+ .++++. ++.||+..-.
T Consensus 111 ~~~~~~-~p~glavd~~~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~l~~P----~~iavdp~~g~ly~td~~ 179 (349)
T 3v64_C 111 VSTGLE-SPGGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKP----RAIALHPMEGTIYWTDWG 179 (349)
T ss_dssp ECSSCS-CCCEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECTTCSCE----EEEEEETTTTEEEEEECS
T ss_pred EeCCCC-CccEEEEecCCCeEEEEcCC------CCeEEEEcCCCCceEEEEeCCCCCc----ceEEEecCcCeEEEeccC
Confidence 211111 1123444 47899988542 346899998765433321 12222 233443 6889998643
Q ss_pred c-ceEEEEECCCCCeeeccC-CCC-CCceEEE--cCeEEEEeC--cEEEEecCCc--eEEeccchhhcccceeEEEEECC
Q 019186 218 L-STVQVLDHMGLGWTVEDY-GWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGD 288 (345)
Q Consensus 218 ~-~~i~~yd~~~~~W~~~~~-~~~-~~~~~~~--~~~l~~~~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~ 288 (345)
. ..|+++++....-+.+.. ... +..+++- +++||+.+. ..|..+|.+. -+.+.... .....+++..++
T Consensus 180 ~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~---~~~P~giav~~~ 256 (349)
T 3v64_C 180 NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---LPHPFAITVFED 256 (349)
T ss_dssp SSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS---CSSEEEEEEETT
T ss_pred CCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC---CCCceEEEEECC
Confidence 4 789999987654444322 111 3344443 789999987 7888888765 22222111 123467777888
Q ss_pred eEEEEc
Q 019186 289 DIYVIG 294 (345)
Q Consensus 289 ~l~i~G 294 (345)
.||+.-
T Consensus 257 ~ly~td 262 (349)
T 3v64_C 257 SLYWTD 262 (349)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999874
No 134
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.97 E-value=0.26 Score=42.57 Aligned_cols=153 Identities=10% Similarity=0.040 Sum_probs=72.3
Q ss_pred EEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCC
Q 019186 58 LCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPV 136 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~ 136 (345)
+++.|+ ....+.+||..++....+..+........-.+++.. ++.+++.|+.+ ..+.+||..
T Consensus 26 ~las~~-~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D----------------~~v~iw~~~ 88 (330)
T 2hes_X 26 ILATGS-TDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD----------------STVSIWAKE 88 (330)
T ss_dssp EEEEEE-SSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT----------------SCEEEEEC-
T ss_pred EEEEEc-CCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC----------------CcEEEEEcc
Confidence 344443 345788899887655443322110000122234333 56677777642 357778774
Q ss_pred CCC-----cccCCCCCCCce-eeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCC--CceEeCCCCCccCCCceeEEEE
Q 019186 137 TRQ-----WSPRASMLVPRA-MFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEK--DVWVPIPDLHRTHNSACTGVVI 207 (345)
Q Consensus 137 t~~-----W~~~~~~~~~r~-~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~ 207 (345)
... +..+..+..... -.+++.. ++..++.|+.++ .+.+||... ..++.+..+... ......+..
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~v~~ 161 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDK------SVWIWETDESGEEYECISVLQEH-SQDVKHVIW 161 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCC-SSCEEEEEE
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccC-CCceEEEEE
Confidence 321 111111111111 1122222 566666666543 388888743 234433222222 112222222
Q ss_pred --CCEEEEEecCcceEEEEECCCCCeeec
Q 019186 208 --GGKVHVLHKGLSTVQVLDHMGLGWTVE 234 (345)
Q Consensus 208 --~~~iyv~gG~~~~i~~yd~~~~~W~~~ 234 (345)
++.+++.|+.-..+..+|..++.|..+
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEE
Confidence 566777777677788888877766544
No 135
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.93 E-value=1.3 Score=42.63 Aligned_cols=114 Identities=13% Similarity=0.106 Sum_probs=69.5
Q ss_pred EEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCC--cccCCCCCCC--------ceeeeeeEeCCeEEEEc
Q 019186 97 VVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQ--WSPRASMLVP--------RAMFACCALKEKIVVAG 166 (345)
Q Consensus 97 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~g 166 (345)
-++.++.||+.... ..++.+|..+++ |+.-...+.. ....+.++.+++||+..
T Consensus 62 P~v~~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 124 (668)
T 1kv9_A 62 PLFHDGVIYTSMSW-----------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT 124 (668)
T ss_dssp CEEETTEEEEEEGG-----------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC
T ss_pred CEEECCEEEEECCC-----------------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc
Confidence 34678999998642 358888887776 7764332211 01223456788888764
Q ss_pred CcCCCCCCCceEEEEeCCCCc--eEeCCC-CCccCCCceeEEEECCEEEEEec-----CcceEEEEECCCCC--eeec
Q 019186 167 GFTSCRKSISQAEMYDPEKDV--WVPIPD-LHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLG--WTVE 234 (345)
Q Consensus 167 G~~~~~~~~~~v~~yd~~~~~--W~~~~~-~~~~~~~~~~~~~~~~~iyv~gG-----~~~~i~~yd~~~~~--W~~~ 234 (345)
. ...+..+|.++.+ |+.-.. .........+-++.++.+|+..+ ....+.+||.++++ |+.-
T Consensus 125 ~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 125 L-------DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred C-------CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 2 2358999998875 875322 11110112233567898887542 24689999998774 8653
No 136
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.92 E-value=0.2 Score=44.91 Aligned_cols=59 Identities=7% Similarity=-0.171 Sum_probs=31.2
Q ss_pred CEEEEEecCcceEEEEECCCCCeee-ccCCCCC-CceEE-EcCeEEEEeC--cEEEEecCCceE
Q 019186 209 GKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQ-GPMAI-VHDSVYLMSH--GLIIKQHRDVRK 267 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~~~~W~~-~~~~~~~-~~~~~-~~~~l~~~~~--~~i~~~d~~~W~ 267 (345)
+.+++.|+....+..||..+++-.. +...... ..++. .++..++.++ +.+..+|..+.+
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4566677677789999988764221 1110000 11111 2444444444 678888876633
No 137
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.92 E-value=0.06 Score=55.65 Aligned_cols=201 Identities=6% Similarity=-0.036 Sum_probs=101.1
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS 145 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 145 (345)
...+.+||..+++...+.... ..-.+++...+..++.++. ...+.+||..+++-...-.
T Consensus 1024 dg~i~vwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~l~~~~~----------------dg~v~vwd~~~~~~~~~~~ 1082 (1249)
T 3sfz_A 1024 DSVIQVWNWQTGDYVFLQAHQ-----ETVKDFRLLQDSRLLSWSF----------------DGTVKVWNVITGRIERDFT 1082 (1249)
T ss_dssp SSBEEEEETTTTEEECCBCCS-----SCEEEEEECSSSEEEEEES----------------SSEEEEEETTTTCCCEEEE
T ss_pred CCEEEEEECCCCceEEEecCC-----CcEEEEEEcCCCcEEEEEC----------------CCcEEEEECCCCceeEEEc
Confidence 457889999888766443222 2223344444444455553 2468889998765322111
Q ss_pred CCCCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE--EECCEEEEEecCcceEE
Q 019186 146 MLVPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV--VIGGKVHVLHKGLSTVQ 222 (345)
Q Consensus 146 ~~~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~~iyv~gG~~~~i~ 222 (345)
..... -.+++. -++..++.|+.++ .+.+||..+.+- +..+... ......+ .-++++.+.|+....+.
T Consensus 1083 ~~~~~-v~~~~~s~d~~~l~s~s~d~------~v~iwd~~~~~~--~~~l~~h-~~~v~~~~~s~dg~~lat~~~dg~i~ 1152 (1249)
T 3sfz_A 1083 CHQGT-VLSCAISSDATKFSSTSADK------TAKIWSFDLLSP--LHELKGH-NGCVRCSAFSLDGILLATGDDNGEIR 1152 (1249)
T ss_dssp CCSSC-CCCEEECSSSSSCEEECCSS------CCCEECSSSSSC--SBCCCCC-SSCEEEEEECSSSSEEEEEETTSCCC
T ss_pred ccCCc-EEEEEECCCCCEEEEEcCCC------cEEEEECCCcce--eeeeccC-CCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 01111 112222 2566666666543 377888776542 2222222 1122222 23677777777667788
Q ss_pred EEECCCCCeeecc-C---------CCC-CCceEE-EcCeEEEEeCcEEEEecCCceEEeccchhhcccceeEEEEECCeE
Q 019186 223 VLDHMGLGWTVED-Y---------GWL-QGPMAI-VHDSVYLMSHGLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDI 290 (345)
Q Consensus 223 ~yd~~~~~W~~~~-~---------~~~-~~~~~~-~~~~l~~~~~~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l 290 (345)
.||..+++-...- + ... ...++. .++++.+.+++.+..+|..+.+.+................-+++.
T Consensus 1153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~ 1232 (1249)
T 3sfz_A 1153 IWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRT 1232 (1249)
T ss_dssp EEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCC
T ss_pred EEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEEEEECCCCceeeeeeccCCcccEEEECCCCCE
Confidence 9998876543211 0 000 111222 356666666678888887764444433311122222223346666
Q ss_pred EEEccee
Q 019186 291 YVIGGVI 297 (345)
Q Consensus 291 ~i~GG~~ 297 (345)
+++|+.+
T Consensus 1233 l~~~~~d 1239 (1249)
T 3sfz_A 1233 YVTVDNL 1239 (1249)
T ss_dssp EEEECTT
T ss_pred EEEecCC
Confidence 6666633
No 138
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.91 E-value=1.3 Score=42.68 Aligned_cols=114 Identities=17% Similarity=0.154 Sum_probs=70.0
Q ss_pred EEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCC--cccCCCCCCC--------ceeeeeeEeCCeEEEEc
Q 019186 97 VVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQ--WSPRASMLVP--------RAMFACCALKEKIVVAG 166 (345)
Q Consensus 97 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~g 166 (345)
-++.++.||+.+.. ..++.+|..|++ |+.-...+.. ....+.++.+++||+..
T Consensus 66 P~v~~g~vyv~~~~-----------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~ 128 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF-----------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV 128 (689)
T ss_dssp CEEETTEEEEECGG-----------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC
T ss_pred CEEECCEEEEEcCC-----------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc
Confidence 34678999998642 458888988776 8764332211 01123456788888865
Q ss_pred CcCCCCCCCceEEEEeCCCCc--eEeCCC--CCccCCCceeEEEECCEEEEEec-----CcceEEEEECCCCC--eeec
Q 019186 167 GFTSCRKSISQAEMYDPEKDV--WVPIPD--LHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLG--WTVE 234 (345)
Q Consensus 167 G~~~~~~~~~~v~~yd~~~~~--W~~~~~--~~~~~~~~~~~~~~~~~iyv~gG-----~~~~i~~yd~~~~~--W~~~ 234 (345)
. -..+..+|.++.+ |+.-.. .........+-++.++.+|+..+ ....+.+||.++++ |+.-
T Consensus 129 ~-------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 129 L-------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred c-------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 2 2358999998875 875432 11110112233567999887532 24689999998875 8753
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.87 E-value=0.61 Score=39.67 Aligned_cols=105 Identities=10% Similarity=0.080 Sum_probs=52.2
Q ss_pred CCeEEEEeCCCCCEEeCCCCCcccccc-ceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCccc
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHL-AHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSP 142 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~ 142 (345)
...+.++|+.+++-...-..+.. . .-..++.. ++ .+|+.+.. ...++++|+.+++-..
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~----------------~~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADA---GPTPMVPMVAPGGRIAYATVNK----------------SESLVKIDLVTGETLG 70 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTC---TTCCCCEEECTTSSEEEEEETT----------------TTEEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEEEEEcCCC---CCCccceEEcCCCCEEEEEeCC----------------CCeEEEEECCCCCeEe
Confidence 46899999988765432222220 0 11223333 44 57777643 3469999998876432
Q ss_pred CCCCCCC----ceeeeeeEe-CC-eEEEEcCcC---CCCC--CCceEEEEeCCCCceE
Q 019186 143 RASMLVP----RAMFACCAL-KE-KIVVAGGFT---SCRK--SISQAEMYDPEKDVWV 189 (345)
Q Consensus 143 ~~~~~~~----r~~~~~~~~-~~-~iyv~gG~~---~~~~--~~~~v~~yd~~~~~W~ 189 (345)
.-..... ..-..++.. ++ .+|+..... .... ....+.+||.++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 71 RIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp EEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred eEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 1111110 011223332 34 666663110 0000 1357899998877543
No 140
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.85 E-value=0.5 Score=39.86 Aligned_cols=147 Identities=12% Similarity=0.019 Sum_probs=72.9
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++ +++.|. ...+.++|..+++....-..... ...-.+++.. +++.++.|+. ...+.+|
T Consensus 36 ~~-~lAvg~--D~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~~~l~sgs~----------------Dg~v~iw 94 (318)
T 4ggc_A 36 GN-VLAVAL--DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTS----------------SAEVQLW 94 (318)
T ss_dssp TS-EEEEEE--TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEET----------------TSEEEEE
T ss_pred CC-EEEEEe--CCEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCCCEEEEEEC----------------CCcEEEe
Confidence 45 444454 35799999999876554333221 1122234443 5667777764 2468889
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHV 213 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv 213 (345)
|..+++-.... ............++.+.+.|+.. ..+..++..+......................++..++
T Consensus 95 ~~~~~~~~~~~--~~h~~~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (318)
T 4ggc_A 95 DVQQQKRLRNM--TSHSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA 166 (318)
T ss_dssp ETTTTEEEEEE--ECCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ecCCceeEEEe--cCccceEEEeecCCCEEEEEecC------CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEE
Confidence 99877532211 11111122233445555555433 23455555444322111111110111111223555666
Q ss_pred EecCcceEEEEECCCCC
Q 019186 214 LHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 214 ~gG~~~~i~~yd~~~~~ 230 (345)
.++....+..+|..+++
T Consensus 167 s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 167 SGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EEETTSCEEEEESSCBT
T ss_pred EEecCcceeEEECCCCc
Confidence 66666778899987653
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.85 E-value=0.73 Score=39.26 Aligned_cols=234 Identities=11% Similarity=0.058 Sum_probs=113.9
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCE-EeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLW-ITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVW 131 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~ 131 (345)
+..+|+.+. ....++.+|+.+++. ........ ...++++.. ++ .+| .+.... ....+.
T Consensus 51 g~~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~-~~~~~~-------------~~~~i~ 111 (331)
T 3u4y_A 51 CSNVVVTSD-FCQTLVQIETQLEPPKVVAIQEGQ----SSMADVDITPDDQFAV-TVTGLN-------------HPFNMQ 111 (331)
T ss_dssp SCEEEEEES-TTCEEEEEECSSSSCEEEEEEECS----SCCCCEEECTTSSEEE-ECCCSS-------------SSCEEE
T ss_pred CCEEEEEeC-CCCeEEEEECCCCceeEEecccCC----CCccceEECCCCCEEE-EecCCC-------------CcccEE
Confidence 455666654 345899999988864 22111111 222223333 34 466 433210 122799
Q ss_pred EEeCCCCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCce-EEEEeCCCCc-eEeC--CCCCccCCCceeEE
Q 019186 132 SYDPVTRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQ-AEMYDPEKDV-WVPI--PDLHRTHNSACTGV 205 (345)
Q Consensus 132 ~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~-v~~yd~~~~~-W~~~--~~~~~~~~~~~~~~ 205 (345)
+||+.+++....- +.....+.++.. ++ .+|+.+... .. +.+|+...+. -... ..++.. . ....+
T Consensus 112 v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~-~-~~~~~ 181 (331)
T 3u4y_A 112 SYSFLKNKFISTI--PIPYDAVGIAISPNGNGLILIDRSS------ANTVRRFKIDADGVLFDTGQEFISGG-T-RPFNI 181 (331)
T ss_dssp EEETTTTEEEEEE--ECCTTEEEEEECTTSSCEEEEEETT------TTEEEEEEECTTCCEEEEEEEEECSS-S-SEEEE
T ss_pred EEECCCCCeEEEE--ECCCCccceEECCCCCEEEEEecCC------CceEEEEEECCCCcEeecCCccccCC-C-Cccce
Confidence 9999887653321 111122334433 44 477765421 23 6666655432 1110 001111 1 12222
Q ss_pred EE--CC-EEEEEecCcceEEEEECCCCCe----eeccCCCCCCceEE-EcCe-EEEEeC--cEEEEecCCc--eEEeccc
Q 019186 206 VI--GG-KVHVLHKGLSTVQVLDHMGLGW----TVEDYGWLQGPMAI-VHDS-VYLMSH--GLIIKQHRDV--RKVVASA 272 (345)
Q Consensus 206 ~~--~~-~iyv~gG~~~~i~~yd~~~~~W----~~~~~~~~~~~~~~-~~~~-l~~~~~--~~i~~~d~~~--W~~~~~~ 272 (345)
.+ ++ .+|+.+.....+..||+.+++. ..++.......++. .+|+ +|+... ..+..+|.++ .+.+...
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~ 261 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSF 261 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccc
Confidence 22 45 4888875667899999987765 22222212233333 3555 666654 6788899876 3223322
Q ss_pred hhh---ccccee---EEE-EECCe-EEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCC
Q 019186 273 SEF---RRRIGF---AMI-GMGDD-IYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMT 331 (345)
Q Consensus 273 p~~---~~r~~~---~~~-~~~~~-l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~ 331 (345)
+.. .++... .++ .-+++ ||+.+. .. +.+.+||+... .=..+..+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~-----------~~v~v~d~~~~--~~~~~~~~~ 314 (331)
T 3u4y_A 262 GHGLLIDPRPLFGANQMALNKTETKLFISAN-IS-----------RELKVFTISGK--VVGYVAGIE 314 (331)
T ss_dssp ECCCCCCCGGGTTCCCEEECTTSSEEEEEET-TT-----------TEEEEEETTSC--EEEECTTCC
T ss_pred ccccccCCCCcccccceEECCCCCEEEEecC-CC-----------CcEEEEEecCC--cccceeccc
Confidence 210 011111 122 23444 555443 21 36889999876 544555543
No 142
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.83 E-value=0.38 Score=41.08 Aligned_cols=171 Identities=9% Similarity=0.043 Sum_probs=81.0
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI 207 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 207 (345)
..+..++.......................-++..++.|+.++ .+.+||.....-......... .....+.+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~------~~~~~d~~~~~~~~~~~~~~~--~~v~~~~~ 179 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK------TIKLWNTLGVCKYTVQDESHS--EWVSCVRF 179 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS------CEEEECTTSCEEEEECSSSCS--SCEEEEEE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCC------eEEEEEeCCCceEEEEecccc--CcccceEE
Confidence 3567777766553332222211111222222445555555432 367788765543222221111 11122222
Q ss_pred ----CCEEEEEecCcceEEEEECCCCCeeeccCCCC-C-CceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhccc
Q 019186 208 ----GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-Q-GPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRR 278 (345)
Q Consensus 208 ----~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~-~-~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r 278 (345)
.+.+++.++....+..||..+.+....-.... . ..++. .++.+++.++ +.+..+|..+.+.+..+.. ..
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~--~~ 257 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GD 257 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--SS
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC--Cc
Confidence 23456666666778899988776543211111 1 11111 2566666555 7888888887555544431 11
Q ss_pred ceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 279 IGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 279 ~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.-..++...+..++.++.+ ..+.+||..+.
T Consensus 258 ~v~~~~~~~~~~~~~~~~d------------~~i~iwd~~~~ 287 (340)
T 4aow_A 258 IINALCFSPNRYWLCAATG------------PSIKIWDLEGK 287 (340)
T ss_dssp CEEEEEECSSSSEEEEEET------------TEEEEEETTTT
T ss_pred eEEeeecCCCCceeeccCC------------CEEEEEECCCC
Confidence 1122333344445555532 15677777654
No 143
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.82 E-value=0.35 Score=44.01 Aligned_cols=159 Identities=13% Similarity=0.155 Sum_probs=90.2
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCC-----cccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCC
Q 019186 101 AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQ-----WSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSI 175 (345)
Q Consensus 101 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~-----W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~ 175 (345)
++++|+|-|. ..|+||..+++ |..++. . -++...++++|++-|..
T Consensus 158 ~~~~yfFkG~------------------~yw~yd~~~~~~~~~~w~gi~~-----i-DAA~~~~g~~YfFkG~~------ 207 (460)
T 1qhu_A 158 DEGILFFQGN------------------RKWFWDLTTGTKKERSWPAVGN-----C-TSALRWLGRYYCFQGNQ------ 207 (460)
T ss_dssp SSEEEEEETT------------------EEEEEETTTTEEEEECCTTSCC-----C-SEEEEETTEEEEEETTE------
T ss_pred CCeEEEEecc------------------cEEEEecccceeecccCCCCCc-----c-chheeeCCceEEEECCE------
Confidence 6788988773 58999998765 333332 1 23334478999998743
Q ss_pred ceEEEEeCCCCc------------eEeCCCC---------------Ccc---CCCceeEEE-ECCEEEEEecCcceEEEE
Q 019186 176 SQAEMYDPEKDV------------WVPIPDL---------------HRT---HNSACTGVV-IGGKVHVLHKGLSTVQVL 224 (345)
Q Consensus 176 ~~v~~yd~~~~~------------W~~~~~~---------------~~~---~~~~~~~~~-~~~~iyv~gG~~~~i~~y 224 (345)
.+.||+.+.+ |..++.. |.. ....-+++. .++++|++-| ...+++
T Consensus 208 --y~rfd~~~~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg--~~yWR~ 283 (460)
T 1qhu_A 208 --FLRFNPVSGEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG--SHYWRL 283 (460)
T ss_dssp --EEEECTTTCCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET--TEEEEC
T ss_pred --EEEEcCccCcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC--CEEEEE
Confidence 6777765432 2222211 000 011223333 4689999865 456777
Q ss_pred ECCCC---------CeeeccCCCCCCceEEEcCeEEEEeCcEEEEecCCc-eEEeccchhh------------cccceeE
Q 019186 225 DHMGL---------GWTVEDYGWLQGPMAIVHDSVYLMSHGLIIKQHRDV-RKVVASASEF------------RRRIGFA 282 (345)
Q Consensus 225 d~~~~---------~W~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~d~~~-W~~~~~~p~~------------~~r~~~~ 282 (345)
|...+ .|..++.. .-++...++++|++-+...+.|+... .+.++..|.. ..+.-.+
T Consensus 284 ~~~~~~~~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG~~yw~f~~~~g~~~~~GyPK~I~~~lGlp~~~~~~~IDAA 361 (460)
T 1qhu_A 284 DTNRDGWHSWPIAHQWPQGPST--VDAAFSWEDKLYLIQDTKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAA 361 (460)
T ss_dssp TTGGGCCCCEEGGGTCTTSCSS--CSEEEEETTEEEEEETTEEEEEECSBSCEECTTCCEEHHHHHCCCSSCCCSCCCEE
T ss_pred ecCCCCcCccchhhhccCCCCC--CcEEEEECCeEEEEeCCEEEEEeCCCCceecCCCCeEHHHhccCCCccccCcccEE
Confidence 65443 23322211 23344468999999999999999764 4444332321 1223333
Q ss_pred EEE-ECCeEEEEcc
Q 019186 283 MIG-MGDDIYVIGG 295 (345)
Q Consensus 283 ~~~-~~~~l~i~GG 295 (345)
+.. -.+++|+|-|
T Consensus 362 ~~~~~~~ktyfFkG 375 (460)
T 1qhu_A 362 FVCPGSSRLHIMAG 375 (460)
T ss_dssp ECCTTCCEEEEEET
T ss_pred EEeCCCCEEEEEEC
Confidence 332 3578999977
No 144
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.82 E-value=0.0087 Score=53.27 Aligned_cols=166 Identities=11% Similarity=-0.004 Sum_probs=70.9
Q ss_pred CceEEEeCCCCC--cccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCC--ceEeCCCCCccCCCcee
Q 019186 128 NEVWSYDPVTRQ--WSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKD--VWVPIPDLHRTHNSACT 203 (345)
Q Consensus 128 ~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~ 203 (345)
..++.+|..+++ |+.-. . ......++.++.+|+.++.++ .+..+|.++. .|+.-...+.. .....
T Consensus 19 g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~dg------~l~a~d~~tG~~~w~~~~~~~~~-~~~sp 87 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPNDG------SLYTLGSKNNEGLTKLPFTIPEL-VQASP 87 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTTC------CEEEC-----CCSEECSCCHHHH-HTTCS
T ss_pred CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCCC------EEEEEECCCCceeeeeeccCccc-cccCc
Confidence 368889988775 76533 1 111233445677887765432 3888998664 46632221111 11111
Q ss_pred EEEECCEEEEEecCcceEEEEECCCC--CeeeccCCCCCCceEEEcCeEEEEeC-cEEEEecCCc----eEEeccchhhc
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGWLQGPMAIVHDSVYLMSH-GLIIKQHRDV----RKVVASASEFR 276 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~l~~~~~-~~i~~~d~~~----W~~~~~~p~~~ 276 (345)
++..++.+|+ |+....++++|++++ .|+.-..... ..+-.++.+|+.+. +.++.+|.++ |+.-..-.
T Consensus 88 ~~~~~~~v~~-g~~dg~v~a~D~~tG~~~w~~~~~~~~--~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~--- 161 (369)
T 2hz6_A 88 CRSSDGILYM-GKKQDIWYVIDLLTGEKQQTLSSAFAD--SLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY--- 161 (369)
T ss_dssp CC-----CCC-CEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE---
T ss_pred eEecCCEEEE-EeCCCEEEEEECCCCcEEEEecCCCcc--cccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc---
Confidence 1124556654 334567899999866 4764322111 11114566666554 7899999865 77531100
Q ss_pred ccceeEEEE-----ECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 277 RRIGFAMIG-----MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 277 ~r~~~~~~~-----~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
...+. .++.+|+... . ..+.++|..+++..|+.-
T Consensus 162 ----~~~~~~~~~~~~~~v~~~~~---d----------g~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 162 ----AASLPEDDVDYKMSHFVSNG---D----------GLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp ----CCBCCCCCTTCCCCEEEEET---S----------CEEEEECTTTCCEEEEEE
T ss_pred ----cCccccCCccccceEEEECC---C----------CEEEEEECCCCcEEEEec
Confidence 01111 1255665321 1 257888888776678753
No 145
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.80 E-value=0.57 Score=40.03 Aligned_cols=210 Identities=9% Similarity=-0.010 Sum_probs=104.3
Q ss_pred EEEEecCCCCeEEEEeC-CCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCC
Q 019186 58 LCVCAFDPENLWQLYDP-LRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPV 136 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~ 136 (345)
+++.|+ ....+.+||. .+++...+...... ..-.+++...+.+++.|+. ...+.+||..
T Consensus 71 ~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~l~s~~~----------------d~~i~iwd~~ 130 (342)
T 1yfq_A 71 QIYVGT-VQGEILKVDLIGSPSFQALTNNEAN---LGICRICKYGDDKLIAASW----------------DGLIEVIDPR 130 (342)
T ss_dssp EEEEEE-TTSCEEEECSSSSSSEEECBSCCCC---SCEEEEEEETTTEEEEEET----------------TSEEEEECHH
T ss_pred EEEEEc-CCCeEEEEEeccCCceEeccccCCC---CceEEEEeCCCCEEEEEcC----------------CCeEEEEccc
Confidence 334443 2457899999 88877665541111 2222344443556666654 2467888876
Q ss_pred C---------CCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCC-Cc--eEeCCCCCccCCCceeE
Q 019186 137 T---------RQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEK-DV--WVPIPDLHRTHNSACTG 204 (345)
Q Consensus 137 t---------~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~-~~--W~~~~~~~~~~~~~~~~ 204 (345)
+ .+ .+..+.....-.+++...+. ++.|+.+ ..+.+||..+ .. ...... +.. ....++
T Consensus 131 ~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~-l~~~~~d------~~i~i~d~~~~~~~~~~~~~~-~~~-~~i~~i 199 (342)
T 1yfq_A 131 NYGDGVIAVKNL--NSNNTKVKNKIFTMDTNSSR-LIVGMNN------SQVQWFRLPLCEDDNGTIEES-GLK-YQIRDV 199 (342)
T ss_dssp HHTTBCEEEEES--CSSSSSSCCCEEEEEECSSE-EEEEEST------TEEEEEESSCCTTCCCEEEEC-SCS-SCEEEE
T ss_pred ccccccccccCC--eeeEEeeCCceEEEEecCCc-EEEEeCC------CeEEEEECCccccccceeeec-CCC-CceeEE
Confidence 5 32 22222222223344444555 4444432 3589999887 33 222111 111 111222
Q ss_pred EEE--CCEEEEEecCcceEEEEECCCC--------CeeeccCCC---------CCCceEE-EcCeEEEEeC--cEEEEec
Q 019186 205 VVI--GGKVHVLHKGLSTVQVLDHMGL--------GWTVEDYGW---------LQGPMAI-VHDSVYLMSH--GLIIKQH 262 (345)
Q Consensus 205 ~~~--~~~iyv~gG~~~~i~~yd~~~~--------~W~~~~~~~---------~~~~~~~-~~~~l~~~~~--~~i~~~d 262 (345)
... ++.++++|+....+..+|.... ......... ....++. .++.+++.++ +.+..+|
T Consensus 200 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 222 4667777766667777666543 111111100 0011111 1455444444 6889999
Q ss_pred CCceEEeccchhhcccceeEEEEECCeEEEEcceecC
Q 019186 263 RDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGP 299 (345)
Q Consensus 263 ~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~ 299 (345)
..+.+.+..+.......-.+++ .+++.++.|+.++.
T Consensus 280 ~~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 280 LQTRKKIKNFAKFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp TTTTEEEEECCCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred CccHhHhhhhhcccCCCceEec-CCCCeEEEEecCCc
Confidence 8876555544421011223444 78888888887654
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.78 E-value=0.56 Score=38.81 Aligned_cols=155 Identities=8% Similarity=-0.057 Sum_probs=78.6
Q ss_pred cEEEEEecCCCCeEEEEeCCC-CCEEeCCCCCccccccceeEEEE-ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLR-DLWITLPVLPSKIRHLAHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
+..+++++ ...++++|..+ ++...+...... ..-..++. -+++.+++++.... ....++.+
T Consensus 53 g~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~------------~~~~l~~~ 115 (297)
T 2ojh_A 53 GKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFAT---ICNNDHGISPDGALYAISDKVEF------------GKSAIYLL 115 (297)
T ss_dssp SSEEEEEE--TTEEEEEESSSCCSCEECCCTTCC---CBCSCCEECTTSSEEEEEECTTT------------SSCEEEEE
T ss_pred CCEEEEEc--CCeEEEEeCCCCCCceEecccccc---ccccceEECCCCCEEEEEEeCCC------------CcceEEEE
Confidence 33444443 45899999998 776665433311 11122233 35665555543211 24678999
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCe-EEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCE-
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEK-IVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGK- 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~- 210 (345)
+..+++-+.+..... ...++.. +++ +++.++.++ ...++.+|..+.....+...... . ......-+++
T Consensus 116 ~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~-~-~~~~~s~dg~~ 186 (297)
T 2ojh_A 116 PSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEGR-N-DGPDYSPDGRW 186 (297)
T ss_dssp ETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSSC-E-EEEEECTTSSE
T ss_pred ECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCCc-c-ccceECCCCCE
Confidence 988776554433221 2222222 444 444443321 23567777777776665443222 1 1111122444
Q ss_pred EEEEec--CcceEEEEECCCCCeeeccC
Q 019186 211 VHVLHK--GLSTVQVLDHMGLGWTVEDY 236 (345)
Q Consensus 211 iyv~gG--~~~~i~~yd~~~~~W~~~~~ 236 (345)
|++.+. ....++.++........+..
T Consensus 187 l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 187 IYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred EEEEecCCCCccEEEECCCCCCcEEEec
Confidence 554442 34567777776766666543
No 147
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.77 E-value=0.35 Score=42.24 Aligned_cols=159 Identities=11% Similarity=0.014 Sum_probs=79.2
Q ss_pred CceEEEeCCCCCcccCCCCCCCce-eeeeeEe---CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRA-MFACCAL---KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT 203 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~-~~~~~~~---~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 203 (345)
..+.+||+.+++-... +..... -.++... ++..++.|+.++ .+.+||..+.+.... +... .....
T Consensus 176 ~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg------~v~~wd~~~~~~~~~--~~~h-~~~v~ 244 (354)
T 2pbi_B 176 GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCDK------KAMVWDMRSGQCVQA--FETH-ESDVN 244 (354)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETTS------CEEEEETTTCCEEEE--ECCC-SSCEE
T ss_pred CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCcEEEE--ecCC-CCCeE
Confidence 4688899987653221 111111 1112221 356777776553 489999988764322 1111 11122
Q ss_pred EEEE--CCEEEEEecCcceEEEEECCCCCeeec-cCCCC--CCceEE--EcCeEEEEeC--cEEEEecCCceEEeccchh
Q 019186 204 GVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWL--QGPMAI--VHDSVYLMSH--GLIIKQHRDVRKVVASASE 274 (345)
Q Consensus 204 ~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~--~~~~~~--~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~ 274 (345)
.+.. ++.+++.|+.-..+..||+.+++-... ..... ....+. .++.+++.++ +.+..||..+.+.+..+..
T Consensus 245 ~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~ 324 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG 324 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC
Confidence 2332 566777777777899999887643221 11111 111111 2566665554 6788888766444433321
Q ss_pred hcccceeEEEEECCeEEEEccee
Q 019186 275 FRRRIGFAMIGMGDDIYVIGGVI 297 (345)
Q Consensus 275 ~~~r~~~~~~~~~~~l~i~GG~~ 297 (345)
...........-+++.++.|+.+
T Consensus 325 h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 325 HENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp CSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCcEEEEEECCCCCEEEEEcCC
Confidence 11222222222366777777644
No 148
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.51 Score=40.66 Aligned_cols=216 Identities=13% Similarity=0.026 Sum_probs=99.2
Q ss_pred EEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeC
Q 019186 57 LLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDP 135 (345)
Q Consensus 57 ~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~ 135 (345)
.+++.|+ ....+.+||..+++-... +... ...-.+++.. ++..++.++. ...+.+||.
T Consensus 45 ~~l~~~~-~dg~i~vwd~~~~~~~~~--~~~h--~~~v~~~~~~~~~~~l~s~~~----------------dg~i~iwd~ 103 (369)
T 3zwl_B 45 DLLFSCS-KDSSASVWYSLNGERLGT--LDGH--TGTIWSIDVDCFTKYCVTGSA----------------DYSIKLWDV 103 (369)
T ss_dssp CEEEEEE-SSSCEEEEETTTCCEEEE--ECCC--SSCEEEEEECTTSSEEEEEET----------------TTEEEEEET
T ss_pred CEEEEEe-CCCEEEEEeCCCchhhhh--hhhc--CCcEEEEEEcCCCCEEEEEeC----------------CCeEEEEEC
Confidence 3344443 235788999877654321 2211 0122234443 4566666664 246889999
Q ss_pred CCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCc----eEeCCCCC-----cc-CCCceeE
Q 019186 136 VTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDV----WVPIPDLH-----RT-HNSACTG 204 (345)
Q Consensus 136 ~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~----W~~~~~~~-----~~-~~~~~~~ 204 (345)
.+++-...-.... .-.+++.. ++..++.++.+. ......+.+||..+.. +......+ .. .......
T Consensus 104 ~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~-~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 104 SNGQCVATWKSPV--PVKRVEFSPCGNYFLAILDNV-MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp TTCCEEEEEECSS--CEEEEEECTTSSEEEEEECCB-TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred CCCcEEEEeecCC--CeEEEEEccCCCEEEEecCCc-cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 8776433222111 11222222 455555544321 1123467788766542 11111100 00 0001222
Q ss_pred EEE--CCEEEEEecCcceEEEEECCC-CCe-eeccCCCC-CCceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhc
Q 019186 205 VVI--GGKVHVLHKGLSTVQVLDHMG-LGW-TVEDYGWL-QGPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFR 276 (345)
Q Consensus 205 ~~~--~~~iyv~gG~~~~i~~yd~~~-~~W-~~~~~~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~ 276 (345)
+.. +++.+++|+....+..||+.+ .+- ..+..... ...++. .++.+++.++ +.+..+|..+.+.+..+.. .
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~ 259 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET-D 259 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-S
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC-C
Confidence 222 455666666678899999987 332 22221111 111121 2555555544 7888888877444333321 1
Q ss_pred ccceeEEEEECCeEEEEccee
Q 019186 277 RRIGFAMIGMGDDIYVIGGVI 297 (345)
Q Consensus 277 ~r~~~~~~~~~~~l~i~GG~~ 297 (345)
.........-+++.+++|+.+
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 260 CPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp SCEEEEEECSSSSEEEEEECC
T ss_pred CCceeEEecCCCceEEEeecC
Confidence 112222223356666666643
No 149
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.76 E-value=0.61 Score=40.12 Aligned_cols=202 Identities=10% Similarity=0.047 Sum_probs=98.8
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEE---ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCccc
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS---TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSP 142 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~ 142 (345)
...+.+||..+++...+.... ..-.+++. .++.+++.|+. ...+.+||..+++-..
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~~~----------------dg~i~vwd~~~~~~~~ 165 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHD-----APVKTIHWIKAPNYSCVMTGSW----------------DKTLKFWDTRSSNPMM 165 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECS-----SCEEEEEEEECSSCEEEEEEET----------------TSEEEEECSSCSSCSE
T ss_pred CCcEEEEEcCCCCceeecccc-----CceEEEEEEeCCCCCEEEEccC----------------CCcEEEEECCCCcEEE
Confidence 457889999888755532211 12223333 25666777664 2468899987765221
Q ss_pred CCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCccCCCceeEEEECC----EEEEEec
Q 019186 143 RASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHRTHNSACTGVVIGG----KVHVLHK 216 (345)
Q Consensus 143 ~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~----~iyv~gG 216 (345)
.+.......+.......+++.++ + ..+.+||..... +..+...... ......+..+. ..++.|+
T Consensus 166 --~~~~~~~~~~~~~~~~~~~~~~~-~------~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (368)
T 3mmy_A 166 --VLQLPERCYCADVIYPMAVVATA-E------RGLIVYQLENQPSEFRRIESPLKH-QHRCVAIFKDKQNKPTGFALGS 235 (368)
T ss_dssp --EEECSSCEEEEEEETTEEEEEEG-G------GCEEEEECSSSCEEEEECCCSCSS-CEEEEEEEECTTSCEEEEEEEE
T ss_pred --EEecCCCceEEEecCCeeEEEeC-C------CcEEEEEeccccchhhhccccccC-CCceEEEcccCCCCCCeEEEec
Confidence 11222222333344554444432 2 247888877653 4444332222 11112222222 2356666
Q ss_pred CcceEEEEECCCCCe----eeccCCC-------------CCCceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhc
Q 019186 217 GLSTVQVLDHMGLGW----TVEDYGW-------------LQGPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFR 276 (345)
Q Consensus 217 ~~~~i~~yd~~~~~W----~~~~~~~-------------~~~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~ 276 (345)
....+..||.....- ....... ....++. .++.+++.++ +.+..+|..+.+.+..+....
T Consensus 236 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 315 (368)
T 3mmy_A 236 IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315 (368)
T ss_dssp TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS
T ss_pred CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC
Confidence 778888898876521 0110000 0011111 1454444444 788888888755554444211
Q ss_pred ccceeEEEEECCeEEEEcceec
Q 019186 277 RRIGFAMIGMGDDIYVIGGVIG 298 (345)
Q Consensus 277 ~r~~~~~~~~~~~l~i~GG~~~ 298 (345)
.........-+++.++.|+.++
T Consensus 316 ~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 316 QPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp SCEEEEEECTTSSCEEEEECCC
T ss_pred CCceEEEECCCCCeEEEEeccc
Confidence 2222222223677777777544
No 150
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.74 E-value=0.099 Score=45.60 Aligned_cols=153 Identities=9% Similarity=0.066 Sum_probs=78.6
Q ss_pred EEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeC
Q 019186 57 LLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDP 135 (345)
Q Consensus 57 ~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~ 135 (345)
.+++.|+. ...+.++|..+++|.....+...+ ...-.+++.. ++..++.|+.+ ..+.+||.
T Consensus 29 ~~las~~~-D~~i~iw~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~g~~l~s~s~D----------------~~v~iw~~ 90 (345)
T 3fm0_A 29 TLLASCGG-DRRIRIWGTEGDSWICKSVLSEGH-QRTVRKVAWSPCGNYLASASFD----------------ATTCIWKK 90 (345)
T ss_dssp SCEEEEET-TSCEEEEEEETTEEEEEEEECSSC-SSCEEEEEECTTSSEEEEEETT----------------SCEEEEEE
T ss_pred CEEEEEcC-CCeEEEEEcCCCcceeeeeecccc-CCcEEEEEECCCCCEEEEEECC----------------CcEEEEEc
Confidence 34444442 356888888888775432221110 0122234333 56677777642 35777887
Q ss_pred CCCCcccCCCCCCCcee-eeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCc-eEeCCCCCccCCCceeEEE--ECCE
Q 019186 136 VTRQWSPRASMLVPRAM-FACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDV-WVPIPDLHRTHNSACTGVV--IGGK 210 (345)
Q Consensus 136 ~t~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~~~--~~~~ 210 (345)
.++.+..+..+...... .+++.. ++.+++.|+.++ .+.+||..+.. +..+..+... ......+. -++.
T Consensus 91 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 91 NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSH-TQDVKHVVWHPSQE 163 (345)
T ss_dssp CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECTTSCEEEEEEECCC-CSCEEEEEECSSSS
T ss_pred cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC------eEEEEECCCCCCeEEEEEecCc-CCCeEEEEECCCCC
Confidence 77655443332222111 222222 566777776543 37888876643 3322222211 11122222 2566
Q ss_pred EEEEecCcceEEEEECCCCCeeec
Q 019186 211 VHVLHKGLSTVQVLDHMGLGWTVE 234 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~W~~~ 234 (345)
+++.|+....+..||..++.|...
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCC 187 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEE
Confidence 667776677888999888877643
No 151
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.72 E-value=0.44 Score=42.60 Aligned_cols=100 Identities=4% Similarity=-0.144 Sum_probs=52.6
Q ss_pred CCEEEEE-ec-CcceEEEEECCCCCeeeccCCCC--CCceEEE-cCeEEEEeC---cEEEEecCCceEEeccchhhcccc
Q 019186 208 GGKVHVL-HK-GLSTVQVLDHMGLGWTVEDYGWL--QGPMAIV-HDSVYLMSH---GLIIKQHRDVRKVVASASEFRRRI 279 (345)
Q Consensus 208 ~~~iyv~-gG-~~~~i~~yd~~~~~W~~~~~~~~--~~~~~~~-~~~l~~~~~---~~i~~~d~~~W~~~~~~p~~~~r~ 279 (345)
+..++++ +| .-..|..||..+++-...-.... ....... ++.+++..+ +.|..+|..+.+.+..+..-..+.
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V 367 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV 367 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE
T ss_pred cccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 3444444 44 44678899998875433211111 1111112 334444443 678888888766666554212233
Q ss_pred eeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCC
Q 019186 280 GFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 319 (345)
Q Consensus 280 ~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~ 319 (345)
.+....-+++.++.||.++ .|.+||+..
T Consensus 368 ~~l~~spdg~~l~S~s~D~------------tvriWdv~~ 395 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADE------------TLRLWRCFE 395 (420)
T ss_dssp EEEEECTTSSCEEEEETTT------------EEEEECCSC
T ss_pred EEEEEcCCCCEEEEEecCC------------eEEEEECCC
Confidence 2322233677888777543 466677643
No 152
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.71 E-value=0.2 Score=44.44 Aligned_cols=145 Identities=17% Similarity=0.222 Sum_probs=72.5
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
+.+++.|+. ...+.++|..+++-... +... ...-.+++.. ++..++.|+. ...+.+||
T Consensus 135 g~~l~s~~~-d~~i~iwd~~~~~~~~~--~~~h--~~~v~~~~~~p~~~~l~s~s~----------------d~~v~iwd 193 (393)
T 1erj_A 135 GKFLATGAE-DRLIRIWDIENRKIVMI--LQGH--EQDIYSLDYFPSGDKLVSGSG----------------DRTVRIWD 193 (393)
T ss_dssp SSEEEEEET-TSCEEEEETTTTEEEEE--ECCC--SSCEEEEEECTTSSEEEEEET----------------TSEEEEEE
T ss_pred CCEEEEEcC-CCeEEEEECCCCcEEEE--EccC--CCCEEEEEEcCCCCEEEEecC----------------CCcEEEEE
Confidence 334444432 45788999887754322 1111 0122234443 4555666654 24688899
Q ss_pred CCCCCcccCCCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEe-CCCCC---ccCCCceeEEEE-
Q 019186 135 PVTRQWSPRASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVP-IPDLH---RTHNSACTGVVI- 207 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~---~~~~~~~~~~~~- 207 (345)
..+++....-... ....+++.. ++.+++.|+.++ .+.+||..+..-.. +.... ..+......+..
T Consensus 194 ~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 265 (393)
T 1erj_A 194 LRTGQCSLTLSIE--DGVTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 265 (393)
T ss_dssp TTTTEEEEEEECS--SCEEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEEEC
T ss_pred CCCCeeEEEEEcC--CCcEEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC
Confidence 9876543221111 111222222 567777776553 38899988765322 21110 110111222222
Q ss_pred -CCEEEEEecCcceEEEEECCCC
Q 019186 208 -GGKVHVLHKGLSTVQVLDHMGL 229 (345)
Q Consensus 208 -~~~iyv~gG~~~~i~~yd~~~~ 229 (345)
+++.++.|+....+..||..+.
T Consensus 266 ~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 266 RDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp TTSSEEEEEETTSEEEEEEC---
T ss_pred CCCCEEEEEeCCCEEEEEECCCC
Confidence 5666777777778888988653
No 153
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.68 E-value=0.82 Score=38.59 Aligned_cols=196 Identities=11% Similarity=0.068 Sum_probs=94.9
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeC-CCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITL-PVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
+.+|+... ...+..||+. ++...+ ...........-..++.. ++.+|+........ +.+...........++++
T Consensus 83 g~l~v~~~--~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~-~~~~~~~~~~~~~~l~~~ 158 (314)
T 1pjx_A 83 NQLFVADM--RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVA-PADYTRSMQEKFGSIYCF 158 (314)
T ss_dssp SEEEEEET--TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCT-TSCCCBTTSSSCEEEEEE
T ss_pred CcEEEEEC--CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccc-cccccccccCCCCeEEEE
Confidence 67887764 2378999998 777665 332211001112234443 67888876432000 000000001123578999
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-----CC-eEEEEcCcCCCCCCCceEEEEeCC-CCceEe---CCCCCccCC-Cce
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-----KE-KIVVAGGFTSCRKSISQAEMYDPE-KDVWVP---IPDLHRTHN-SAC 202 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-----~~-~iyv~gG~~~~~~~~~~v~~yd~~-~~~W~~---~~~~~~~~~-~~~ 202 (345)
|+. ++...+.... ....+++.. ++ .+|+.... ...+.+||.+ +.+... ...++.. . ...
T Consensus 159 ~~~-g~~~~~~~~~--~~~~~i~~~~~~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~-~~~~p 228 (314)
T 1pjx_A 159 TTD-GQMIQVDTAF--QFPNGIAVRHMNDGRPYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGT-HEGGA 228 (314)
T ss_dssp CTT-SCEEEEEEEE--SSEEEEEEEECTTSCEEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCC-SSCEE
T ss_pred CCC-CCEEEeccCC--CCcceEEEecccCCCCCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCC-CCCCC
Confidence 986 5543321100 111233333 33 56776432 2458888875 343221 1112211 1 122
Q ss_pred eEEEE--CCEEEEEecCcceEEEEECCCCCe-eeccCCCC-CCceEE-EcCe-EEEEeC--cEEEEecCCc
Q 019186 203 TGVVI--GGKVHVLHKGLSTVQVLDHMGLGW-TVEDYGWL-QGPMAI-VHDS-VYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 203 ~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W-~~~~~~~~-~~~~~~-~~~~-l~~~~~--~~i~~~d~~~ 265 (345)
..+.. ++.+|+.....+.+.+||+.+++. ..+..... ...++. .+++ ||+.+. +.++.++++.
T Consensus 229 ~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 23333 578988854456899999985543 22221111 122222 2455 777766 3888887654
No 154
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.66 E-value=1.1 Score=39.98 Aligned_cols=196 Identities=9% Similarity=0.002 Sum_probs=111.1
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCC----
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQ---- 139 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~---- 139 (345)
...+...|+....+..+..-. ..-.+++.. ++.||+.--. ...++++++....
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~-----~~~~~l~~d~~~~~lywsD~~----------------~~~I~~~~~~g~~~~~~ 149 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDLS----------------QRMICSTQLDRAHGVSS 149 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSC-----SCEEEEEEETTTTEEEEEETT----------------TTEEEEEEC------CC
T ss_pred cceeEEEccCCcceeEecccc-----CcceEEeeeeccCceEEEecC----------------CCeEEEEEcccCCCCCc
Confidence 467888999888776653221 223455554 6889998542 3468888886522
Q ss_pred cccCCCCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC--CCCccCCCceeEEEE--CCEEEE
Q 019186 140 WSPRASMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGVVI--GGKVHV 213 (345)
Q Consensus 140 W~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~--~~~iyv 213 (345)
...+.... ...-.++++ .++.||+.-.. ...++++|++...-+.+. .+..+ .++++. ++.||+
T Consensus 150 ~~~~~~~~-~~~p~glavD~~~~~lY~~d~~------~~~I~~~~~~g~~~~~l~~~~~~~P----~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 150 YDTVISRD-IQAPDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP----RAIVVDPVHGFMYW 218 (400)
T ss_dssp CEEEECSS-CSCEEEEEEETTTTEEEEEETT------TTEEEEECTTTCSEEEEEECSSCCE----EEEEEETTTTEEEE
T ss_pred ceEEEeCC-CCCcccEEEEecCCceEEEECC------CCeEEEEeCCCCceEEEEeCCCCCc----ceEEEecccCeEEE
Confidence 11211111 112234444 47899998542 346899998876544332 22222 233343 688999
Q ss_pred Ee-cCcceEEEEECCCCCeeec-cCC-CCCCceEEE--cCeEEEEeC--cEEEEecCCc--eEEeccchhhcccceeEEE
Q 019186 214 LH-KGLSTVQVLDHMGLGWTVE-DYG-WLQGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRIGFAMI 284 (345)
Q Consensus 214 ~g-G~~~~i~~yd~~~~~W~~~-~~~-~~~~~~~~~--~~~l~~~~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~ 284 (345)
.. |....|+++++....=..+ ... ..+..+++- +++||+.+. ..|..+|.+. -+.+...+. .-....+++
T Consensus 219 td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~-~l~~P~gl~ 297 (400)
T 3p5b_L 219 TDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-RLAHPFSLA 297 (400)
T ss_dssp EECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS-TTSSEEEEE
T ss_pred EeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC-CCCCCEEEE
Confidence 86 3446899999875433332 222 123344443 689999987 7888888765 223322110 112345777
Q ss_pred EECCeEEEEc
Q 019186 285 GMGDDIYVIG 294 (345)
Q Consensus 285 ~~~~~l~i~G 294 (345)
..++.||+.-
T Consensus 298 v~~~~lywtd 307 (400)
T 3p5b_L 298 VFEDKVFWTD 307 (400)
T ss_dssp EETTEEEEEE
T ss_pred EeCCEEEEec
Confidence 7889999874
No 155
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.66 E-value=0.85 Score=38.58 Aligned_cols=189 Identities=11% Similarity=-0.022 Sum_probs=98.2
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEE
Q 019186 101 AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAE 179 (345)
Q Consensus 101 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~ 179 (345)
++.||+.... ...+++||+.+++...... +. .-.+++.. ++++++... ..+.
T Consensus 24 ~~~l~~~d~~----------------~~~i~~~d~~~~~~~~~~~-~~--~~~~i~~~~dG~l~v~~~--------~~l~ 76 (297)
T 3g4e_A 24 SNSLLFVDIP----------------AKKVCRWDSFTKQVQRVTM-DA--PVSSVALRQSGGYVATIG--------TKFC 76 (297)
T ss_dssp TTEEEEEETT----------------TTEEEEEETTTCCEEEEEC-SS--CEEEEEEBTTSSEEEEET--------TEEE
T ss_pred CCEEEEEECC----------------CCEEEEEECCCCcEEEEeC-CC--ceEEEEECCCCCEEEEEC--------CeEE
Confidence 4778888643 3579999998876533221 11 11223332 667666531 3589
Q ss_pred EEeCCCCceEeCCCCCcc-CCCceeEEEE--CCEEEEEec-----------CcceEEEEECCCCCeeeccCCCC-CCceE
Q 019186 180 MYDPEKDVWVPIPDLHRT-HNSACTGVVI--GGKVHVLHK-----------GLSTVQVLDHMGLGWTVEDYGWL-QGPMA 244 (345)
Q Consensus 180 ~yd~~~~~W~~~~~~~~~-~~~~~~~~~~--~~~iyv~gG-----------~~~~i~~yd~~~~~W~~~~~~~~-~~~~~ 244 (345)
.||+++.+++.+...... .......+.+ ++++|+..- ....++++|+. ++...+..... ...++
T Consensus 77 ~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 77 ALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLD 155 (297)
T ss_dssp EEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEE
T ss_pred EEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceE
Confidence 999999888766443221 0111222333 677887531 12468888875 33333221111 12223
Q ss_pred EE-cC-eEEEEeC--cEEEEecC--Cc--eE---EeccchhhcccceeEEEE-ECCeEEEEcceecCCCCcccccccCce
Q 019186 245 IV-HD-SVYLMSH--GLIIKQHR--DV--RK---VVASASEFRRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDV 312 (345)
Q Consensus 245 ~~-~~-~l~~~~~--~~i~~~d~--~~--W~---~~~~~p~~~~r~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~~~v 312 (345)
.. ++ .+|+.+. ..|+.|+. ++ .. .+..++. ......+++. -++.||+... .+ ..|
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~-~~-----------~~v 222 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACY-NG-----------GRV 222 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEE-TT-----------TEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEc-CC-----------CEE
Confidence 22 34 5888775 67888864 22 21 1222221 1112234443 3677887642 11 258
Q ss_pred eeeccCCCCCceeEcCCCCC
Q 019186 313 DVLTVGAERPTWRQVSPMTR 332 (345)
Q Consensus 313 ~~yd~~~~~~~W~~v~~~~~ 332 (345)
.+||+++. +....-++|.
T Consensus 223 ~~~d~~tG--~~~~~i~~p~ 240 (297)
T 3g4e_A 223 IRLDPVTG--KRLQTVKLPV 240 (297)
T ss_dssp EEECTTTC--CEEEEEECSS
T ss_pred EEEcCCCc--eEEEEEECCC
Confidence 89999876 5444434453
No 156
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.65 E-value=0.81 Score=40.02 Aligned_cols=132 Identities=7% Similarity=-0.056 Sum_probs=69.3
Q ss_pred CceEEEeCCCCCcccCCCCC-CCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeE
Q 019186 128 NEVWSYDPVTRQWSPRASML-VPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTG 204 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~ 204 (345)
..+.+||..+.+........ ....-.+++.. ++.+++.++.+ ..+.+||..+.....+...........++
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 169 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVIQVFAKTDSWDYWYCCV 169 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEEEEEECCCCSSCCEEEE
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCceEEEeccCCCCCCeEEE
Confidence 46888998877655433321 22222333333 34566666543 35889999877665553332210111222
Q ss_pred E-EECCEEEEEecCcceEEEEECCCCCeeeccCCCCC-CceEE-EcCe-EEEEeC--cEEEEecCCc
Q 019186 205 V-VIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQ-GPMAI-VHDS-VYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 205 ~-~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~-~~~~~-~~~~-l~~~~~--~~i~~~d~~~ 265 (345)
. .-++..++.|+....+..||+....-..+...... ..++. .++. +++.++ +.+..||..+
T Consensus 170 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 170 DVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 2 23566667777778899999865444333221111 11111 2343 555544 6788887764
No 157
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.57 E-value=0.72 Score=39.28 Aligned_cols=191 Identities=14% Similarity=0.177 Sum_probs=100.3
Q ss_pred CcEEEEEecCCCCeEEEEeCC-CCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPL-RDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~-~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.+|+.. ....++.||+. ...|+.... .. ...+.+.. ++.||+... ...++.
T Consensus 107 ~~~l~v~t--~~~~l~~~d~~g~~~~~~~~~--~~----~~~~~~~~~~g~l~vgt~-----------------~~~l~~ 161 (330)
T 3hxj_A 107 EDILYVTS--MDGHLYAINTDGTEKWRFKTK--KA----IYATPIVSEDGTIYVGSN-----------------DNYLYA 161 (330)
T ss_dssp TTEEEEEC--TTSEEEEECTTSCEEEEEECS--SC----CCSCCEECTTSCEEEECT-----------------TSEEEE
T ss_pred CCEEEEEe--cCCEEEEEcCCCCEEEEEcCC--Cc----eeeeeEEcCCCEEEEEcC-----------------CCEEEE
Confidence 66677654 24578899987 234654322 11 11223344 667777542 246888
Q ss_pred EeCCCCC--cccCCCCCCCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCC-CceEeCCCCCccCCCceeEEEE-
Q 019186 133 YDPVTRQ--WSPRASMLVPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEK-DVWVPIPDLHRTHNSACTGVVI- 207 (345)
Q Consensus 133 yd~~t~~--W~~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~- 207 (345)
||+. ++ |..... .. ...+.+. .++.+|+.. ..+..||... ..|+.-... . . ..+.+..
T Consensus 162 ~d~~-g~~~~~~~~~--~~-~~~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~~--~-~-~~~~~~~~ 224 (330)
T 3hxj_A 162 INPD-GTEKWRFKTN--DA-ITSAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFYAGY--W-T-VTRPAISE 224 (330)
T ss_dssp ECTT-SCEEEEEECS--SC-CCSCCEECTTCCEEEES---------SSEEEECTTSCEEEEECCSS--C-C-CSCCEECT
T ss_pred ECCC-CCEeEEEecC--CC-ceeeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEccCC--c-c-eeceEECC
Confidence 8887 43 543221 11 1223333 367777664 2378888432 246643221 1 1 1122233
Q ss_pred CCEEEEEecCcceEEEEECCCC-CeeeccCCCCCCceEEE-cCeEEEEeC-cEEEEecCCc---eEEeccchhhccccee
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGL-GWTVEDYGWLQGPMAIV-HDSVYLMSH-GLIIKQHRDV---RKVVASASEFRRRIGF 281 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~-~~~l~~~~~-~~i~~~d~~~---W~~~~~~p~~~~r~~~ 281 (345)
++.||+.. ....+.+||.... .|+...........+.. ++.||+... +.++.+|++. |..- ++ .. ...
T Consensus 225 ~g~l~v~t-~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~--~~--~~-~~~ 298 (330)
T 3hxj_A 225 DGTIYVTS-LDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFE--TG--SW-IIA 298 (330)
T ss_dssp TSCEEEEE-TTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEE--CS--SC-CCS
T ss_pred CCeEEEEc-CCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEE--cC--Cc-ccc
Confidence 45788765 3467888987544 35543322222334444 788988876 4899999753 5542 22 11 122
Q ss_pred EEEE-ECCeEEEE
Q 019186 282 AMIG-MGDDIYVI 293 (345)
Q Consensus 282 ~~~~-~~~~l~i~ 293 (345)
+++. -+++||+.
T Consensus 299 ~~~~d~~g~l~~g 311 (330)
T 3hxj_A 299 TPVIDENGTIYFG 311 (330)
T ss_dssp CCEECTTCCEEEE
T ss_pred ceEEcCCCEEEEE
Confidence 3333 56777774
No 158
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.52 E-value=1.2 Score=39.79 Aligned_cols=143 Identities=10% Similarity=-0.056 Sum_probs=77.7
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCE-EEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGK-LFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
..++++|..+++...+...+. ...+++.. +++ |++.+... ....++++|+.+++...+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-----~~~~~~~spdg~~la~~~~~~--------------g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-----HNGAPAFSPDGSKLAFALSKT--------------GSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-----CEEEEEECTTSSEEEEEECTT--------------SSCEEEEEETTTCCEEECC
T ss_pred cEEEEEECCCCcEEEeecCCC-----cccCEEEcCCCCEEEEEEecC--------------CCceEEEEECCCCCEEeCc
Confidence 588999999888766543322 22233333 455 44444321 2357999999988766554
Q ss_pred CCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeE-EEECCEEEEEec-C--cc
Q 019186 145 SMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTG-VVIGGKVHVLHK-G--LS 219 (345)
Q Consensus 145 ~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~~iyv~gG-~--~~ 219 (345)
..... ....+.. +++.+++++..+ ....++.+|..+..-..+... . ...... ..-+++.+++++ . ..
T Consensus 264 ~~~~~--~~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~~~~~~l~~~--~-~~~~~~~~spdG~~l~~~~~~~g~~ 335 (415)
T 2hqs_A 264 DGRSN--NTEPTWFPDSQNLAFTSDQA---GRPQVYKVNINGGAPQRITWE--G-SQNQDADVSSDGKFMVMVSSNGGQQ 335 (415)
T ss_dssp CCSSC--EEEEEECTTSSEEEEEECTT---SSCEEEEEETTSSCCEECCCS--S-SEEEEEEECTTSSEEEEEEECSSCE
T ss_pred CCCCc--ccceEECCCCCEEEEEECCC---CCcEEEEEECCCCCEEEEecC--C-CcccCeEECCCCCEEEEEECcCCce
Confidence 33211 1222222 555444433221 135789999988765544321 1 111111 223555444433 1 35
Q ss_pred eEEEEECCCCCeeeccC
Q 019186 220 TVQVLDHMGLGWTVEDY 236 (345)
Q Consensus 220 ~i~~yd~~~~~W~~~~~ 236 (345)
.+..+|+.+++...+..
T Consensus 336 ~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 336 HIAKQDLATGGVQVLSS 352 (415)
T ss_dssp EEEEEETTTCCEEECCC
T ss_pred EEEEEECCCCCEEEecC
Confidence 79999999988876654
No 159
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.51 E-value=0.58 Score=42.04 Aligned_cols=148 Identities=6% Similarity=-0.040 Sum_probs=76.8
Q ss_pred EEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCC-CCceeeeeeE--eCCeEEEEcCcCC
Q 019186 96 GVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASML-VPRAMFACCA--LKEKIVVAGGFTS 170 (345)
Q Consensus 96 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~--~~~~iyv~gG~~~ 170 (345)
+++.+ ++.+++.|+.+ ..+.+||..+++-...-.+. ....-.+++. .++.+++.|+.++
T Consensus 124 ~l~~~P~~~~~lasGs~d----------------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 124 SLAWHPTHPSTVAVGSKG----------------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp EEEECSSCTTCEEEEETT----------------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred EEEEeCCCCCEEEEEeCC----------------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 34444 35577777652 35888888776543322221 1122223333 2566667776553
Q ss_pred CCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE-EECCEEEEEecCcceEEEEECCCCCeeeccCCCCCCceEEE--c
Q 019186 171 CRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--H 247 (345)
Q Consensus 171 ~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~--~ 247 (345)
.+.+||.+++....+...........++. .-++.+++.|+....+..+|.....-..+.........+.. +
T Consensus 188 ------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 188 ------TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp ------CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTT
T ss_pred ------EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCC
Confidence 38889998876554433222211122222 33677778887778899999876543222211111111111 2
Q ss_pred C-eEEEEeC--cEEEEecCCc
Q 019186 248 D-SVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 248 ~-~l~~~~~--~~i~~~d~~~ 265 (345)
+ .+++.++ +.+..||..+
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTT
T ss_pred CceEEEEecCcceeeEEeccc
Confidence 3 3554443 5666777654
No 160
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.50 E-value=1.3 Score=39.82 Aligned_cols=103 Identities=6% Similarity=-0.127 Sum_probs=54.4
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEe--CCCCCccCCCceeE-EEEC---CEEEEEecCcceEEEEECCCCCee
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVP--IPDLHRTHNSACTG-VVIG---GKVHVLHKGLSTVQVLDHMGLGWT 232 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~--~~~~~~~~~~~~~~-~~~~---~~iyv~gG~~~~i~~yd~~~~~W~ 232 (345)
++..++.|+.+ ..+..+|..+..-.. +..+......-.++ ..-+ +++++.|+....+..||+.+.+..
T Consensus 160 ~~~~l~~~~~~------g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 233 (450)
T 2vdu_B 160 DDTTVIIADKF------GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV 233 (450)
T ss_dssp TSSEEEEEETT------SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE
T ss_pred CCCEEEEEeCC------CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee
Confidence 55666666432 347888877654331 11222110111122 2346 777778777778999998877543
Q ss_pred ec-c-CCCC-CCceEEEcCeEEEEeC--cEEEEecCCceE
Q 019186 233 VE-D-YGWL-QGPMAIVHDSVYLMSH--GLIIKQHRDVRK 267 (345)
Q Consensus 233 ~~-~-~~~~-~~~~~~~~~~l~~~~~--~~i~~~d~~~W~ 267 (345)
.. . .... ...++..++.+++.++ +.+..+|..+.+
T Consensus 234 ~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 234 DKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCC
T ss_pred eeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCc
Confidence 22 1 1111 1111212566655555 788888877633
No 161
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.49 E-value=1.4 Score=40.04 Aligned_cols=199 Identities=15% Similarity=0.130 Sum_probs=108.4
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
++.+|+|-| +..+.||..+++.... ..+.- +.. -++....+++|+|-|. ..++||
T Consensus 158 ~~~~yfFkG---~~yw~yd~~~~~~~~~-~w~gi--~~i-DAA~~~~g~~YfFkG~------------------~y~rfd 212 (460)
T 1qhu_A 158 DEGILFFQG---NRKWFWDLTTGTKKER-SWPAV--GNC-TSALRWLGRYYCFQGN------------------QFLRFN 212 (460)
T ss_dssp SSEEEEEET---TEEEEEETTTTEEEEE-CCTTS--CCC-SEEEEETTEEEEEETT------------------EEEEEC
T ss_pred CCeEEEEec---ccEEEEecccceeecc-cCCCC--Ccc-chheeeCCceEEEECC------------------EEEEEc
Confidence 456677775 4689999987754421 11111 121 2344457999999874 577888
Q ss_pred CCCCCcc------------cCCCCC------------------CCceeeeee-E-eCCeEEEEcCcCCCCCCCceEEEEe
Q 019186 135 PVTRQWS------------PRASML------------------VPRAMFACC-A-LKEKIVVAGGFTSCRKSISQAEMYD 182 (345)
Q Consensus 135 ~~t~~W~------------~~~~~~------------------~~r~~~~~~-~-~~~~iyv~gG~~~~~~~~~~v~~yd 182 (345)
+.+++-. .++... .+.....++ . .++++|.+-|.. .+.+|
T Consensus 213 ~~~~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~~--------yWR~~ 284 (460)
T 1qhu_A 213 PVSGEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGSH--------YWRLD 284 (460)
T ss_dssp TTTCCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETTE--------EEECT
T ss_pred CccCcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCCE--------EEEEe
Confidence 7665422 222100 001112222 2 468999997743 45555
Q ss_pred CCCCceE--eC----CCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCeeeccCCCC----------C-----C
Q 019186 183 PEKDVWV--PI----PDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL----------Q-----G 241 (345)
Q Consensus 183 ~~~~~W~--~~----~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~----------~-----~ 241 (345)
...+.+. .+ +.+|.. --++...++++|++=| +.+++|+..++ .+.++..|. . -
T Consensus 285 ~~~~~~~p~~Is~~WpglP~~---IDAAf~~~~~~yfFkG--~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~I 358 (460)
T 1qhu_A 285 TNRDGWHSWPIAHQWPQGPST---VDAAFSWEDKLYLIQD--TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAV 358 (460)
T ss_dssp TGGGCCCCEEGGGTCTTSCSS---CSEEEEETTEEEEEET--TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCC
T ss_pred cCCCCcCccchhhhccCCCCC---CcEEEEECCeEEEEeC--CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcc
Confidence 4332211 11 123332 2234456899999964 56788886431 222211111 1 2
Q ss_pred ceEE---EcCeEEEEeCcEEEEecCCc-----eEEeccchhhcccceeEEEE-----------ECCeEEEEcc
Q 019186 242 PMAI---VHDSVYLMSHGLIIKQHRDV-----RKVVASASEFRRRIGFAMIG-----------MGDDIYVIGG 295 (345)
Q Consensus 242 ~~~~---~~~~l~~~~~~~i~~~d~~~-----W~~~~~~p~~~~r~~~~~~~-----------~~~~l~i~GG 295 (345)
-++. -++++|++.+...+.||... +...+.+| ...-.++.. .++.+|+|-|
T Consensus 359 DAA~~~~~~~ktyfFkG~~ywryd~~~~Pr~i~~~~~gi~---~~vdAaf~~~~~~~~~~~~~~~~~~yfF~g 428 (460)
T 1qhu_A 359 DAAFVCPGSSRLHIMAGRRLWWLDLKSGAQATWTELPWPH---EKVDGALCMEKPLGPNSCSTSGPNLYLIHG 428 (460)
T ss_dssp CEEECCTTCCEEEEEETTEEEEEEGGGGGGCCCEEECCSC---SCCSEEEEESSCSSSCCSCSSSCEEEEEET
T ss_pred cEEEEeCCCCEEEEEECCEEEEEECCCCccchhhhCCCCC---CCcCEEEecccccCcccccccCCeEEEEEC
Confidence 2233 36899999999999999765 44444433 344444442 4577999977
No 162
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.41 E-value=1.7 Score=42.38 Aligned_cols=180 Identities=11% Similarity=0.063 Sum_probs=97.4
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCcc--ccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSK--IRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVW 131 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~--~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~ 131 (345)
++.|++.. ...+..||+.+++++........ .....-.++... ++.|+|.. . ...++
T Consensus 383 ~g~lWigt---~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT-~----------------~~Gl~ 442 (758)
T 3ott_A 383 EQQLWIAT---DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST-C----------------LGGIF 442 (758)
T ss_dssp TSCEEEEE---TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE-S----------------SSCEE
T ss_pred CCCEEEEe---CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE-C----------------CCceE
Confidence 44556543 24788999999988765421110 001122334333 46788753 1 12477
Q ss_pred EEeCCC------CCcc------cCCCCCCCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCC--CCc
Q 019186 132 SYDPVT------RQWS------PRASMLVPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPD--LHR 196 (345)
Q Consensus 132 ~yd~~t------~~W~------~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~--~~~ 196 (345)
+||+.+ ..+. ....++.. .-.++.. -++.|++++|... -+..||+++++++.... +..
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~~~t~~------Gl~~~d~~~~~~~~~~~~~~~~ 515 (758)
T 3ott_A 443 VVDKHKLMQSTSGQYIAEQNYSVHNGLSGM-FINQIIPDNEGNVWVLLYNNK------GIDKINPRTREVTKLFADELTG 515 (758)
T ss_dssp EEEHHHHHHCCSSEEECSEEECGGGTCSCS-CEEEEEECTTSCEEEEETTCS------SEEEEETTTTEEEEECTTTSCG
T ss_pred EEccccccccCCcceecccccccccccccc-eeeeEEEcCCCCEEEEccCCC------CcEEEeCCCCceEEecCCCcCC
Confidence 787653 1111 01112211 1122222 2578888655432 28899999998887632 111
Q ss_pred cCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeeccC--CCC--CCceEEEcCeEEEEeCcEEEEecCCc
Q 019186 197 THNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY--GWL--QGPMAIVHDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 197 ~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~--~~~--~~~~~~~~~~l~~~~~~~i~~~d~~~ 265 (345)
. . ....+.. +|.|++.. ...+.+||+++++++.... .+. ..++..-+|.|++-....+..||+++
T Consensus 516 ~-~-~~~~i~~d~~g~lWigt--~~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~~g~lWi~t~~Gl~~~~~~~ 586 (758)
T 3ott_A 516 E-K-SPNYLLCDEDGLLWVGF--HGGVMRINPKDESQQSISFGSFSNNEILSMTCVKNSIWVSTTNGLWIIDRKT 586 (758)
T ss_dssp G-G-CEEEEEECTTSCEEEEE--TTEEEEECC--CCCCBCCCCC---CCEEEEEEETTEEEEEESSCEEEEETTT
T ss_pred C-c-ccceEEECCCCCEEEEe--cCceEEEecCCCceEEecccCCCccceEEEEECCCCEEEECCCCeEEEcCCC
Confidence 1 1 1122333 57788755 3579999999888766531 111 22334457899998888899999987
No 163
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.40 E-value=1.1 Score=38.37 Aligned_cols=195 Identities=10% Similarity=0.006 Sum_probs=108.2
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCC----CCc
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVT----RQW 140 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t----~~W 140 (345)
+.+..+|+.+.+...+-+.. ..-.+++.. ++.||+.... ...++++++.+ ..-
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~-----~~p~g~~~d~~~~~ly~~D~~----------------~~~I~~~~~~g~~~~~~~ 68 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDLS----------------QRMICSTQLDRAHGVSSY 68 (316)
T ss_dssp SSEEEEETTSCCCEEEECSC-----SSEEEEEEETTTTEEEEEETT----------------TTEEEEEEC--------C
T ss_pred CeEEEEECCCcceEehhcCC-----CceEEEEEEeCCCEEEEEECC----------------CCcEEEEECCCCCCCccc
Confidence 56888998887765542211 222345554 5789998643 35789999876 221
Q ss_pred ccCCCCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC--CCCccCCCceeEEEE--CCEEEEE
Q 019186 141 SPRASMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGVVI--GGKVHVL 214 (345)
Q Consensus 141 ~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~--~~~iyv~ 214 (345)
+.+..... ..-.++++ .++.||+.-.. .+.++++|+....-+.+. .+..+ ..+++. ++.||+.
T Consensus 69 ~~~~~~~~-~~p~glavd~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P----~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 69 DTVISRDI-QAPDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP----RAIVVDPVHGFMYWT 137 (316)
T ss_dssp EEEECSSC-SCCCEEEEETTTTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCE----EEEEEETTTTEEEEE
T ss_pred EEEEeCCC-CCcCEEEEeecCCeEEEEECC------CCEEEEEeCCCCceEEEEECCCCCc----ceEEeCCCCCEEEEE
Confidence 21111011 11234444 47899998532 346889998765433221 12222 233443 6889998
Q ss_pred ecC-cceEEEEECCCCCeeecc-C-CCCCCceEEE--cCeEEEEeC--cEEEEecCCc--eEEeccchhhcccceeEEEE
Q 019186 215 HKG-LSTVQVLDHMGLGWTVED-Y-GWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIG 285 (345)
Q Consensus 215 gG~-~~~i~~yd~~~~~W~~~~-~-~~~~~~~~~~--~~~l~~~~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~ 285 (345)
.-. ...|+++++....-+.+. . ...+..++.- +++||+.+. ..|..+|.+. -+.+..... ......+++.
T Consensus 138 d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~-~~~~P~giav 216 (316)
T 1ijq_A 138 DWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-RLAHPFSLAV 216 (316)
T ss_dssp ECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT-TTSSEEEEEE
T ss_pred ccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC-ccCCcEEEEE
Confidence 632 368999998654433332 1 1113344443 689999987 6888888764 333322110 1223457777
Q ss_pred ECCeEEEEc
Q 019186 286 MGDDIYVIG 294 (345)
Q Consensus 286 ~~~~l~i~G 294 (345)
.++.||+.-
T Consensus 217 ~~~~ly~~d 225 (316)
T 1ijq_A 217 FEDKVFWTD 225 (316)
T ss_dssp ETTEEEEEE
T ss_pred ECCEEEEEE
Confidence 788899874
No 164
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.36 E-value=0.54 Score=48.49 Aligned_cols=171 Identities=6% Similarity=-0.041 Sum_probs=87.5
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV 206 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 206 (345)
..+.+||..+++........ ...-.+++. -+++.++.|+.+ ..+.+||..+........... ...+...
T Consensus 983 g~i~i~d~~~~~~~~~~~~h-~~~v~~l~~s~dg~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~---~v~~~~~ 1052 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGH-KKAVRHIQFTADGKTLISSSED------SVIQVWNWQTGDYVFLQAHQE---TVKDFRL 1052 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCC-SSCCCCEEECSSSSCEEEECSS------SBEEEEETTTTEEECCBCCSS---CEEEEEE
T ss_pred CCEEEEEcCCCceeeecccC-CCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCceEEEecCCC---cEEEEEE
Confidence 35788898776532211111 111112222 256666666654 348999999887664332211 1222233
Q ss_pred ECCEEEEEecCcceEEEEECCCCCeeec-cCCCC--CCceEEEcCeEEEEeC--cEEEEecCCceEEeccchhhccccee
Q 019186 207 IGGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWL--QGPMAIVHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGF 281 (345)
Q Consensus 207 ~~~~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~--~~~~~~~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~ 281 (345)
..+..++.++....+..||..+++-... ..... .......++.+++.++ +.+..||..+.+.+..+.........
T Consensus 1053 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~ 1132 (1249)
T 3sfz_A 1053 LQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRC 1132 (1249)
T ss_dssp CSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEE
T ss_pred cCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEE
Confidence 3333345555677899999987754321 11111 1122223555555555 67777777664444333311122222
Q ss_pred EEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 282 AMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 282 ~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
....-++++++.|+.++ .|.+||..+.
T Consensus 1133 ~~~s~dg~~lat~~~dg------------~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1133 SAFSLDGILLATGDDNG------------EIRIWNVSDG 1159 (1249)
T ss_dssp EEECSSSSEEEEEETTS------------CCCEEESSSS
T ss_pred EEECCCCCEEEEEeCCC------------EEEEEECCCC
Confidence 22233777888877443 4678888765
No 165
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.31 E-value=0.28 Score=46.30 Aligned_cols=117 Identities=12% Similarity=0.066 Sum_probs=73.3
Q ss_pred EEEECCEEEEEecCcceEEEEEC-CCC--CeeeccCCC-----------CCCceEEEcCeEEEEeC-cEEEEecCCc---
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDH-MGL--GWTVEDYGW-----------LQGPMAIVHDSVYLMSH-GLIIKQHRDV--- 265 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~-~~~--~W~~~~~~~-----------~~~~~~~~~~~l~~~~~-~~i~~~d~~~--- 265 (345)
-++.++.+|+.......++++|. +++ .|+.-.... .....++.++++|+... +.++.+|.++
T Consensus 58 P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 58 PLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp CEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCE
T ss_pred cEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCE
Confidence 35679999998732567999999 766 588643321 12335677899998876 7899999876
Q ss_pred -eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 266 -RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 266 -W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
|+.-..-+........+.+..++.||+..+..+. ..-..++.||+++.+..|+.-
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAEL-------GVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGG-------TCCCEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCCCccceeccCCEEECCEEEEEecCCcc-------CCCCEEEEEECCCCcEEEEEc
Confidence 8754221100011222334468888775432211 012478999999887789764
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.27 E-value=0.77 Score=39.86 Aligned_cols=140 Identities=11% Similarity=0.016 Sum_probs=64.5
Q ss_pred EEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCE-EEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCC
Q 019186 69 WQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGK-LFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASM 146 (345)
Q Consensus 69 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~ 146 (345)
++.+|+.+++++.+... .. .... .++.. +++ ||+........ ..-.+|.++..+++.+.+...
T Consensus 31 ~~~~d~~~g~~~~~~~~-~~--~~p~-~l~~spdg~~l~~~~~~~~~~-----------~~v~~~~~~~~~g~~~~~~~~ 95 (361)
T 3scy_A 31 TFRFNEETGESLPLSDA-EV--ANPS-YLIPSADGKFVYSVNEFSKDQ-----------AAVSAFAFDKEKGTLHLLNTQ 95 (361)
T ss_dssp EEEEETTTCCEEEEEEE-EC--SCCC-SEEECTTSSEEEEEECCSSTT-----------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEeCCCCCEEEeecc-cC--CCCc-eEEECCCCCEEEEEEccCCCC-----------CcEEEEEEeCCCCcEEEeeEe
Confidence 44557788888776544 11 1112 23333 444 66665421100 123345566665666655443
Q ss_pred CCC-ceeeeeeEeCCe-EEEEcCcCCCCCCCceEEEEeCCCCc-eEeCCC-------CCcc---CCCc-eeEEE-ECC-E
Q 019186 147 LVP-RAMFACCALKEK-IVVAGGFTSCRKSISQAEMYDPEKDV-WVPIPD-------LHRT---HNSA-CTGVV-IGG-K 210 (345)
Q Consensus 147 ~~~-r~~~~~~~~~~~-iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~~~-------~~~~---~~~~-~~~~~-~~~-~ 210 (345)
+.. ..-..++. +++ +|+.... ...+.+|+..++. ...+.. -+.+ .... +.++. -++ .
T Consensus 96 ~~~~~~p~~~~~-dg~~l~~~~~~------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~ 168 (361)
T 3scy_A 96 KTMGADPCYLTT-NGKNIVTANYS------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY 168 (361)
T ss_dssp ECSSSCEEEEEE-CSSEEEEEETT------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE
T ss_pred ccCCCCcEEEEE-CCCEEEEEECC------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE
Confidence 321 12223333 554 5555422 2458888876532 111110 0100 0011 22222 245 4
Q ss_pred EEEEecCcceEEEEECCCCC
Q 019186 211 VHVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~ 230 (345)
+|+.+.....+..|+.....
T Consensus 169 l~~~~~~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 169 LLADDLGTDQIHKFNINPNA 188 (361)
T ss_dssp EEEEETTTTEEEEEEECTTC
T ss_pred EEEEeCCCCEEEEEEEcCCC
Confidence 88776446678888766443
No 167
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.25 E-value=0.19 Score=48.44 Aligned_cols=116 Identities=15% Similarity=0.072 Sum_probs=73.9
Q ss_pred EEEECCEEEEEecCcceEEEEECCCC--CeeeccCCCC-----------CCceEEEcCeEEEEeC-cEEEEecCCc----
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGWL-----------QGPMAIVHDSVYLMSH-GLIIKQHRDV---- 265 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~~~~--~W~~~~~~~~-----------~~~~~~~~~~l~~~~~-~~i~~~d~~~---- 265 (345)
-++.++.||+.. ....++++|.+++ .|+.-..... ....++.++++|+... +.++.+|.++
T Consensus 62 P~v~~g~vyv~~-~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 62 PLFHDGVIYTSM-SWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAI 140 (668)
T ss_dssp CEEETTEEEEEE-GGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEE
T ss_pred CEEECCEEEEEC-CCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEe
Confidence 356899999987 3568999999876 5876433211 2335667899998875 8999999876
Q ss_pred eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 266 RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 266 W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
|+.-..-+........+.+..++.||+..+..+. .....++.||+++.+..|+.-
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY-------GVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEEE
T ss_pred eeeccCCCCCcceecCCCEEECCEEEEeCCCCCc-------CCCCEEEEEECCCCcEEEEec
Confidence 8875422111112222334567877764332111 122478999999887789763
No 168
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.23 E-value=0.34 Score=41.59 Aligned_cols=144 Identities=10% Similarity=-0.063 Sum_probs=72.8
Q ss_pred ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCce
Q 019186 100 TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQ 177 (345)
Q Consensus 100 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~ 177 (345)
.++++|+.++. ...++++|+.+++....-..+.......++.. ++ .+|+.+.. ...
T Consensus 9 ~~~~~~v~~~~----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~------~~~ 66 (349)
T 1jmx_B 9 AGHEYMIVTNY----------------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH------YGD 66 (349)
T ss_dssp TTCEEEEEEET----------------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT------TTE
T ss_pred CCCEEEEEeCC----------------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC------CCc
Confidence 35677877764 35789999988765432222210012233333 44 57777532 246
Q ss_pred EEEEeCCCCceEeCCCCCc---c-CCCceeEEE-ECC-EEEEEecC-----------cceEEEEECCCCCee----eccC
Q 019186 178 AEMYDPEKDVWVPIPDLHR---T-HNSACTGVV-IGG-KVHVLHKG-----------LSTVQVLDHMGLGWT----VEDY 236 (345)
Q Consensus 178 v~~yd~~~~~W~~~~~~~~---~-~~~~~~~~~-~~~-~iyv~gG~-----------~~~i~~yd~~~~~W~----~~~~ 236 (345)
+.+||+++.+-...-..+. . .......+. -++ .+|+.+.. ...+..||+.+++-. ....
T Consensus 67 i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 146 (349)
T 1jmx_B 67 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM 146 (349)
T ss_dssp EEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC
T ss_pred EEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC
Confidence 9999998876432211111 0 011112222 244 56655421 368999998774321 1111
Q ss_pred CCCCCceE-EEcCeEEEEeCcEEEEecCCce
Q 019186 237 GWLQGPMA-IVHDSVYLMSHGLIIKQHRDVR 266 (345)
Q Consensus 237 ~~~~~~~~-~~~~~l~~~~~~~i~~~d~~~W 266 (345)
......++ ..+|++|+. +..++.+|.++.
T Consensus 147 ~~~~~~~~~s~dg~l~~~-~~~i~~~d~~~~ 176 (349)
T 1jmx_B 147 PRQVYLMRAADDGSLYVA-GPDIYKMDVKTG 176 (349)
T ss_dssp CSSCCCEEECTTSCEEEE-SSSEEEECTTTC
T ss_pred CCcccceeECCCCcEEEc-cCcEEEEeCCCC
Confidence 11112222 246777764 445888888763
No 169
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.20 E-value=1.4 Score=38.09 Aligned_cols=211 Identities=8% Similarity=-0.000 Sum_probs=109.0
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
.+.+|+.|. ...++.-.-.-.+|+.+...... ......+++..++.+|++|.. ..+++-+
T Consensus 46 ~~~~~~~G~--~g~i~~s~DgG~tW~~~~~~~~~-~~~~~~~i~~~~~~~~~~g~~-----------------g~i~~S~ 105 (327)
T 2xbg_A 46 RHHGWLVGV--NATLMETRDGGQTWEPRTLVLDH-SDYRFNSVSFQGNEGWIVGEP-----------------PIMLHTT 105 (327)
T ss_dssp SSCEEEEET--TTEEEEESSTTSSCEECCCCCSC-CCCEEEEEEEETTEEEEEEET-----------------TEEEEES
T ss_pred CCcEEEEcC--CCeEEEeCCCCCCCeECCCCCCC-CCccEEEEEecCCeEEEEECC-----------------CeEEEEC
Confidence 556677653 23344433334589998643211 012344566667889887631 2455544
Q ss_pred CCCCCcccCCCCC-CCceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-CCEE
Q 019186 135 PVTRQWSPRASML-VPRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GGKV 211 (345)
Q Consensus 135 ~~t~~W~~~~~~~-~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~i 211 (345)
-.-++|+.+.... .+.....++. -++.+|+.+.. ..++.-+-.-.+|+.+...... ...+++.. ++.+
T Consensus 106 DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------g~v~~S~DgG~tW~~~~~~~~~--~~~~~~~~~~~~~ 176 (327)
T 2xbg_A 106 DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV-------GAIYRTKDSGKNWQALVQEAIG--VMRNLNRSPSGEY 176 (327)
T ss_dssp STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT-------CCEEEESSTTSSEEEEECSCCC--CEEEEEECTTSCE
T ss_pred CCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC-------ccEEEEcCCCCCCEEeecCCCc--ceEEEEEcCCCcE
Confidence 4457899876431 1112233443 36788887641 1244444445679987543222 22233332 5667
Q ss_pred EEEecCcceEEEEE-CCCCCeeeccCCCC--CCceEE-EcCeEEEEeC-cEEEEe--c-CCceEEeccchhhcccceeEE
Q 019186 212 HVLHKGLSTVQVLD-HMGLGWTVEDYGWL--QGPMAI-VHDSVYLMSH-GLIIKQ--H-RDVRKVVASASEFRRRIGFAM 283 (345)
Q Consensus 212 yv~gG~~~~i~~yd-~~~~~W~~~~~~~~--~~~~~~-~~~~l~~~~~-~~i~~~--d-~~~W~~~~~~p~~~~r~~~~~ 283 (345)
|++| ....++.-+ .....|+.+..... ...++. .++.+|+.+. +.++.. | .++|+++...+.......+.+
T Consensus 177 ~~~g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v 255 (327)
T 2xbg_A 177 VAVS-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDL 255 (327)
T ss_dssp EEEE-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEE
T ss_pred EEEE-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEE
Confidence 7666 344455543 23578988743222 112222 3678888876 566665 3 234998753211111122334
Q ss_pred EEE-CCeEEEEcc
Q 019186 284 IGM-GDDIYVIGG 295 (345)
Q Consensus 284 ~~~-~~~l~i~GG 295 (345)
+.. ++.+|++|+
T Consensus 256 ~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 256 AYRTPNEVWLAGG 268 (327)
T ss_dssp EESSSSCEEEEES
T ss_pred EecCCCEEEEEeC
Confidence 333 567888876
No 170
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.18 E-value=1 Score=38.41 Aligned_cols=134 Identities=7% Similarity=0.018 Sum_probs=66.0
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
...+.++|..+++-.. .+... ...-.+++.. ++.+++.|+.+ ..+.+||...+.-..+.
T Consensus 86 D~~v~~wd~~~~~~~~--~~~~h--~~~v~~~~~~~~~~~l~s~s~D----------------~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 86 DKTLRLWDVATGETYQ--RFVGH--KSDVMSVDIDKKASMIISGSRD----------------KTIKVWTIKGQCLATLL 145 (319)
T ss_dssp TSEEEEEETTTTEEEE--EEECC--SSCEEEEEECTTSCEEEEEETT----------------SCEEEEETTSCEEEEEC
T ss_pred CCEEEEEECCCCCeeE--EEccC--CCcEEEEEEcCCCCEEEEEeCC----------------CeEEEEECCCCeEEEEe
Confidence 4678899998875322 11111 0112233333 45667777652 35778887543322211
Q ss_pred CCCCCceeeeeeEe-------CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE--ECCEEEEEe
Q 019186 145 SMLVPRAMFACCAL-------KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLH 215 (345)
Q Consensus 145 ~~~~~r~~~~~~~~-------~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~~iyv~g 215 (345)
.... .-..+... ++..++.|+.+ ..+.+||..+.+-.. .+... ......+. -++++++.|
T Consensus 146 ~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~--~~~~h-~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 146 GHND--WVSQVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEA--DFIGH-NSNINTLTASPDGTLIASA 214 (319)
T ss_dssp CCSS--CEEEEEECCC------CCEEEEEETT------SCEEEEETTTTEEEE--EECCC-CSCEEEEEECTTSSEEEEE
T ss_pred ccCC--cEEEEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhhe--eecCC-CCcEEEEEEcCCCCEEEEE
Confidence 1111 11111111 23345555544 248889987754321 11111 11122222 266777777
Q ss_pred cCcceEEEEECCCCC
Q 019186 216 KGLSTVQVLDHMGLG 230 (345)
Q Consensus 216 G~~~~i~~yd~~~~~ 230 (345)
+....+..+|..+.+
T Consensus 215 ~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 215 GKDGEIMLWNLAAKK 229 (319)
T ss_dssp ETTCEEEEEETTTTE
T ss_pred eCCCeEEEEECCCCc
Confidence 777889999988764
No 171
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.15 E-value=0.81 Score=38.64 Aligned_cols=106 Identities=9% Similarity=0.118 Sum_probs=58.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCce-eeeeeEe---CCeEEEEcCcCCCCCCCc
Q 019186 101 AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRA-MFACCAL---KEKIVVAGGFTSCRKSIS 176 (345)
Q Consensus 101 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~-~~~~~~~---~~~iyv~gG~~~~~~~~~ 176 (345)
+++.++.|+.+ ..+.+||..+++.+.+..+..... -.+++.. ++.+++.|+.+ .
T Consensus 20 ~g~~las~s~D----------------~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D------~ 77 (297)
T 2pm7_B 20 YGKRMATCSSD----------------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------G 77 (297)
T ss_dssp TSSEEEEEETT----------------SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------T
T ss_pred CCCEEEEEeCC----------------CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC------C
Confidence 56777777652 457888886554433322222111 1222222 25666776654 3
Q ss_pred eEEEEeCCCCceEeCCCCCccCCCceeEEEE--C--CEEEEEecCcceEEEEECCCC
Q 019186 177 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G--GKVHVLHKGLSTVQVLDHMGL 229 (345)
Q Consensus 177 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~--~~iyv~gG~~~~i~~yd~~~~ 229 (345)
.+.+||.++.+|..+..+... ......+.. + +.+++.|+....+..||..+.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred EEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 488999988877654333222 122222333 2 456667767778889998765
No 172
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.02 E-value=1 Score=42.73 Aligned_cols=112 Identities=17% Similarity=0.135 Sum_probs=70.7
Q ss_pred eeeeEeCCeEEEEcCcCCCCCCCceEEEEeC-CCCc--eEeCCCCCccC----C---CceeEEE--ECCE----EEEEec
Q 019186 153 FACCALKEKIVVAGGFTSCRKSISQAEMYDP-EKDV--WVPIPDLHRTH----N---SACTGVV--IGGK----VHVLHK 216 (345)
Q Consensus 153 ~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~-~~~~--W~~~~~~~~~~----~---~~~~~~~--~~~~----iyv~gG 216 (345)
.+-++.++.||+....+ ..+..+|. ++.+ |+.-....... + ...+.++ .+++ ||+..
T Consensus 56 ~tP~v~~g~vyv~~~~~------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t- 128 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ- 128 (599)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC-
T ss_pred eccEEECCEEEEEeCCC------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc-
Confidence 44566799999986532 34899999 7764 88643332110 0 0122344 5777 88765
Q ss_pred CcceEEEEECCCC--CeeeccCC-----CCCCceEEEcCeEEEEe-------CcEEEEecCCc----eEEecc
Q 019186 217 GLSTVQVLDHMGL--GWTVEDYG-----WLQGPMAIVHDSVYLMS-------HGLIIKQHRDV----RKVVAS 271 (345)
Q Consensus 217 ~~~~i~~yd~~~~--~W~~~~~~-----~~~~~~~~~~~~l~~~~-------~~~i~~~d~~~----W~~~~~ 271 (345)
....++++|.+++ .|+.-... ....+-++.++.+|+-. .+.++.||.++ |+.-..
T Consensus 129 ~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 129 LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 3568999999877 48754322 12334456789888765 26899999876 876543
No 173
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.02 E-value=1.4 Score=37.38 Aligned_cols=213 Identities=14% Similarity=0.048 Sum_probs=112.9
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.||+... ....++.+|+..+ .......+. .-++++.. ++++||...... ...++++
T Consensus 42 ~g~lyv~d~-~~~~I~~~d~~g~-~~~~~~~~~-----~p~gia~~~dG~l~vad~~~~--------------~~~v~~~ 100 (306)
T 2p4o_A 42 DGTIFVTNH-EVGEIVSITPDGN-QQIHATVEG-----KVSGLAFTSNGDLVATGWNAD--------------SIPVVSL 100 (306)
T ss_dssp TSCEEEEET-TTTEEEEECTTCC-EEEEEECSS-----EEEEEEECTTSCEEEEEECTT--------------SCEEEEE
T ss_pred CCCEEEEeC-CCCeEEEECCCCc-eEEEEeCCC-----CceeEEEcCCCcEEEEeccCC--------------cceEEEE
Confidence 445777652 3457899998764 322222221 12234443 677888753210 1248889
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCc---eEeCC-----CCCccCCCceeE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDV---WVPIP-----DLHRTHNSACTG 204 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~---W~~~~-----~~~~~~~~~~~~ 204 (345)
|+.+++.+.+...+..+...+.+.. ++.+|+.... ...++++|+.+.. |..-+ ...........+
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi 174 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL 174 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc
Confidence 9888877655444433333333333 5567775321 2468999987642 21111 111110112223
Q ss_pred EEECCEEEEEecCcceEEEEECCC-CCe---eeccCCCCCCceEE-EcCeEEEEeC--cEEEEecCCc-eEEeccchhhc
Q 019186 205 VVIGGKVHVLHKGLSTVQVLDHMG-LGW---TVEDYGWLQGPMAI-VHDSVYLMSH--GLIIKQHRDV-RKVVASASEFR 276 (345)
Q Consensus 205 ~~~~~~iyv~gG~~~~i~~yd~~~-~~W---~~~~~~~~~~~~~~-~~~~l~~~~~--~~i~~~d~~~-W~~~~~~p~~~ 276 (345)
..-++.||+..-..+.+.+||... ++. +.......+..+++ .+|++|+... ..|..+|++. ...+..++.+.
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~ 254 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGV 254 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTC
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeeccccc
Confidence 333568999876678899999875 322 11111112233443 3678999875 7899999875 44443343211
Q ss_pred ccceeEEEEE-----CCeEEEEcc
Q 019186 277 RRIGFAMIGM-----GDDIYVIGG 295 (345)
Q Consensus 277 ~r~~~~~~~~-----~~~l~i~GG 295 (345)
....+++.- ++.|||...
T Consensus 255 -~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 255 -IGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp -TTEEEEEECCSTTTTTEEEEEEC
T ss_pred -CCceEEEEecccCCCCEEEEECC
Confidence 222333332 257888754
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.01 E-value=2.5 Score=40.10 Aligned_cols=249 Identities=9% Similarity=-0.144 Sum_probs=119.9
Q ss_pred CcEEEEEecCCCCeEEEEeCC--C-CCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCce
Q 019186 55 ENLLCVCAFDPENLWQLYDPL--R-DLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEV 130 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~--~-~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (345)
+..++++.......++.++.. . ++-..+...+...........+.. +|+.+++.......+ .......++
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~------~~~~~~~~i 163 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGE------GPSDVRRFL 163 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSS------STTCEEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCC------CCCCceeEE
Confidence 344144444445678888887 4 666666554311000122233333 565444444321000 000134689
Q ss_pred EEEeCCC------CCcccCC-CCCCCceeeeeeE-eCCeEEEEcCcCCCCC--CCceEEEEeCC-CC---ceEeCCCCCc
Q 019186 131 WSYDPVT------RQWSPRA-SMLVPRAMFACCA-LKEKIVVAGGFTSCRK--SISQAEMYDPE-KD---VWVPIPDLHR 196 (345)
Q Consensus 131 ~~yd~~t------~~W~~~~-~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~--~~~~v~~yd~~-~~---~W~~~~~~~~ 196 (345)
+++|..+ ++-+.+. .-. ......+. -+++..++........ ....++++|.+ +. ..+.+..-..
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 164 AAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE 241 (662)
T ss_dssp EEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred EEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence 9999988 5555443 211 11122222 2555444433322111 13579999998 56 3333321111
Q ss_pred cCCCceeEEEECCEEEEEecC--cceEEEEECCCCCeeeccCCCC----------CCceEEE-cCeEEEEe---CcEEEE
Q 019186 197 THNSACTGVVIGGKVHVLHKG--LSTVQVLDHMGLGWTVEDYGWL----------QGPMAIV-HDSVYLMS---HGLIIK 260 (345)
Q Consensus 197 ~~~~~~~~~~~~~~iyv~gG~--~~~i~~yd~~~~~W~~~~~~~~----------~~~~~~~-~~~l~~~~---~~~i~~ 260 (345)
. ........-|+++|+.+.. ...++.+|+.+++++.+..... ...++.. ++++++.. ...++.
T Consensus 242 ~-~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (662)
T 3azo_A 242 E-AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGI 320 (662)
T ss_dssp B-CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEE
T ss_pred c-eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEE
Confidence 1 1111112236777777652 3379999998888887644321 1123332 66766664 267777
Q ss_pred ecCCc--eEEeccchhhcccceeEE-EEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 261 QHRDV--RKVVASASEFRRRIGFAM-IGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 261 ~d~~~--W~~~~~~p~~~~r~~~~~-~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
+|.+. .+.+.... . ....+ ..-++.+++..+... ...+++.+|+.++ +.+++
T Consensus 321 ~d~~~~~~~~l~~~~---~-~~~~~~s~~~~~~~~~~~~~~---------~~~~i~~~d~~~g--~~~~l 375 (662)
T 3azo_A 321 LDPESGELVDAAGPW---T-EWAATLTVSGTRAVGVAASPR---------TAYEVVELDTVTG--RARTI 375 (662)
T ss_dssp EETTTTEEEECCSSC---C-EEEEEEEEETTEEEEEEEETT---------EEEEEEEEETTTC--CEEEE
T ss_pred EECCCCcEEEecCCC---C-eEEEEEecCCCEEEEEEcCCC---------CCCEEEEEECCCC--ceEEe
Confidence 77654 44443211 1 11222 233555655544221 1236777777766 55555
No 175
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.95 E-value=1.9 Score=38.29 Aligned_cols=167 Identities=11% Similarity=-0.049 Sum_probs=93.2
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
..++.+++.....+.+...... .-.++++. ++.||+.-.. ...++++++....-+.+.
T Consensus 138 ~~I~r~~~~g~~~~~~~~~~~~----~p~glavd~~~g~lY~~d~~----------------~~~I~~~~~dg~~~~~l~ 197 (386)
T 3v65_B 138 DRILRANLNGSNVEEVVSTGLE----SPGGLAVDWVHDKLYWTDSG----------------TSRIEVANLDGAHRKVLL 197 (386)
T ss_dssp TEEEEEETTSCCEEEEECSSCS----CCCCEEEETTTTEEEEEETT----------------TTEEEECBTTSCSCEEEE
T ss_pred CcEEEEecCCCCcEEEEeCCCC----CccEEEEEeCCCeEEEEcCC----------------CCeEEEEeCCCCceEEee
Confidence 4566666665554443211110 11234443 6889988542 346888888654322221
Q ss_pred --CCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE--ECCEEEEEecCc
Q 019186 145 --SMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLHKGL 218 (345)
Q Consensus 145 --~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~~iyv~gG~~ 218 (345)
.+..+ .++++- ++.||+.-... ...++++++....-+.+.. .......+++. .+++||+.....
T Consensus 198 ~~~l~~P---~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~--~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 198 WQSLEKP---RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp CSSCSCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEEC--SSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred cCCCCCC---cEEEEEcCCCeEEEeccCC-----CCEEEEEeCCCCCcEEEEE--CCCCCeeeEEEeCCCCEEEEEECCC
Confidence 11122 233433 68899874311 3579999987654333211 11011223333 368999998767
Q ss_pred ceEEEEECCCCCee-ecc-CCCCCCceEEEcCeEEEEeC--cEEEEecC
Q 019186 219 STVQVLDHMGLGWT-VED-YGWLQGPMAIVHDSVYLMSH--GLIIKQHR 263 (345)
Q Consensus 219 ~~i~~yd~~~~~W~-~~~-~~~~~~~~~~~~~~l~~~~~--~~i~~~d~ 263 (345)
..|+++|+....-. .+. ....+..+++.++.||+.+. ..|..++.
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 268 HVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp TEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence 88999998754322 222 22235667778899999876 67777774
No 176
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.93 E-value=1.4 Score=36.93 Aligned_cols=223 Identities=7% Similarity=-0.061 Sum_probs=100.3
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeC
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDP 135 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~ 135 (345)
+.+++.|+. ...+.++|..+++-... +... .........++.+.+.|+. ...+..++.
T Consensus 79 ~~~l~sgs~-Dg~v~iw~~~~~~~~~~--~~~h---~~~~~~~~~~~~~l~s~~~----------------~~~~~~~~~ 136 (318)
T 4ggc_A 79 GNYLAVGTS-SAEVQLWDVQQQKRLRN--MTSH---SARVGSLSWNSYILSSGSR----------------SGHIHHHDV 136 (318)
T ss_dssp SSEEEEEET-TSEEEEEETTTTEEEEE--EECC---SSCEEEEEEETTEEEEEET----------------TSEEEEEET
T ss_pred CCEEEEEEC-CCcEEEeecCCceeEEE--ecCc---cceEEEeecCCCEEEEEec----------------CCceEeeec
Confidence 334444442 35788899888754322 1111 1122223344556666553 234555555
Q ss_pred CCCCcccCCCCCCCc-eeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEe--CCCCCccCCCc-eeEEEE--CC
Q 019186 136 VTRQWSPRASMLVPR-AMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVP--IPDLHRTHNSA-CTGVVI--GG 209 (345)
Q Consensus 136 ~t~~W~~~~~~~~~r-~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~--~~~~~~~~~~~-~~~~~~--~~ 209 (345)
.+............. ........++..++.++.++ .+.+||..+.+-.. ....... ... .+.... ++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 209 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN------LVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWCPWQS 209 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEESSCBTTBSCCSEEECCC-CSCEEEEEECTTST
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc------ceeEEECCCCcccccceeeeccc-CCceEEEEecCCCC
Confidence 443322111001111 11112223555666655442 38888887654211 1111111 111 111111 22
Q ss_pred E-EEEEec-CcceEEEEECCCCCeeeccCCCC--CCceEE-EcCeEEEEeC---cEEEEecCCceEEeccchhhccccee
Q 019186 210 K-VHVLHK-GLSTVQVLDHMGLGWTVEDYGWL--QGPMAI-VHDSVYLMSH---GLIIKQHRDVRKVVASASEFRRRIGF 281 (345)
Q Consensus 210 ~-iyv~gG-~~~~i~~yd~~~~~W~~~~~~~~--~~~~~~-~~~~l~~~~~---~~i~~~d~~~W~~~~~~p~~~~r~~~ 281 (345)
. +.+..| ....+..+|.....-........ ...... .++.+++.++ +.+..+|..+.+.+..+.........
T Consensus 210 ~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 210 NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 289 (318)
T ss_dssp TEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred cEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 3 334444 55678888887765443322111 111111 2344555543 67888888776665554411122222
Q ss_pred EEEEECCeEEEEcceecCCCCcccccccCceeeeccCC
Q 019186 282 AMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 319 (345)
Q Consensus 282 ~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~ 319 (345)
....-++++++.||.++ .|.+||+..
T Consensus 290 l~~spdg~~l~S~s~D~------------~v~iWd~~~ 315 (318)
T 4ggc_A 290 LTMSPDGATVASAAADE------------TLRLWRCFE 315 (318)
T ss_dssp EEECTTSSCEEEEETTT------------EEEEECCSC
T ss_pred EEEcCCCCEEEEEecCC------------eEEEEECCC
Confidence 12223677777777543 466777643
No 177
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.88 E-value=1.7 Score=37.45 Aligned_cols=100 Identities=6% Similarity=-0.080 Sum_probs=54.7
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE-EECCEEEEEecCcceEEEEECCCCCee--ecc
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGGKVHVLHKGLSTVQVLDHMGLGWT--VED 235 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~iyv~gG~~~~i~~yd~~~~~W~--~~~ 235 (345)
++..++.|+.++ .+.+||.++.+-..+...... ....+++ .-++.+++.|+....+..||.++.+-. .+.
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~~-~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 210 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKSD-VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP 210 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCSS-CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCCC-CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe
Confidence 456666666543 389999988765433222222 1122222 236778888877888999999877643 232
Q ss_pred C-CCCC-CceEE-EcCeEEEEeC-cEEEEecCCc
Q 019186 236 Y-GWLQ-GPMAI-VHDSVYLMSH-GLIIKQHRDV 265 (345)
Q Consensus 236 ~-~~~~-~~~~~-~~~~l~~~~~-~~i~~~d~~~ 265 (345)
. .... ..++. .++..++.++ +.+..+|..+
T Consensus 211 ~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~ 244 (343)
T 3lrv_A 211 VDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRK 244 (343)
T ss_dssp CCTTSCEEEEEECTTSSEEEEEESSBEEEEETTS
T ss_pred ccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCC
Confidence 2 1111 11111 1444444443 6777787765
No 178
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.80 E-value=0.55 Score=39.84 Aligned_cols=177 Identities=5% Similarity=-0.045 Sum_probs=86.5
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
...+.++|..+++-.. .+... ...-.+++.. ++.+++.|+. ...+.+||..++. ....
T Consensus 76 d~~i~vwd~~~~~~~~--~~~~h--~~~v~~~~~~~~~~~l~sgs~----------------D~~v~lWd~~~~~-~~~~ 134 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVV--DFEAH--PDYIRSIAVHPTKPYVLSGSD----------------DLTVKLWNWENNW-ALEQ 134 (304)
T ss_dssp TSEEEEEETTTCCEEE--EEECC--SSCEEEEEECSSSSEEEEEET----------------TSCEEEEEGGGTT-EEEE
T ss_pred CCEEEEEECCCCcEEE--EEeCC--CCcEEEEEEcCCCCEEEEECC----------------CCeEEEEECCCCc-chhh
Confidence 4678899998775322 11111 0122234443 4556666664 2457888876542 1111
Q ss_pred CCCC-CceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCccCCCceeEEEE----CCEEEEEe
Q 019186 145 SMLV-PRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHRTHNSACTGVVI----GGKVHVLH 215 (345)
Q Consensus 145 ~~~~-~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~----~~~iyv~g 215 (345)
.+.. ...-.+++.. ++.+++.|+.+ ..+.+||..+.. ..... .. ......+.. ++.+++.|
T Consensus 135 ~~~~h~~~v~~v~~~p~~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~--~~--~~~v~~~~~~~~~~~~~l~s~ 204 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTT--GQ--ERGVNYVDYYPLPDKPYMITA 204 (304)
T ss_dssp EECCCCSCEEEEEECTTCTTEEEEEETT------SEEEEEETTCSSCSEEEEC--CC--TTCEEEEEECCSTTCCEEEEE
T ss_pred hhcccCCcEEEEEECCCCCCEEEEEeCC------CeEEEEECCCCCccceecc--CC--cCcEEEEEEEEcCCCCEEEEE
Confidence 1111 1111222332 45667777654 348888876543 11110 01 111122222 45566677
Q ss_pred cCcceEEEEECCCCCeee-ccCCCCCC-ceE-EEcCeEEEEeC--cEEEEecCCceEEeccch
Q 019186 216 KGLSTVQVLDHMGLGWTV-EDYGWLQG-PMA-IVHDSVYLMSH--GLIIKQHRDVRKVVASAS 273 (345)
Q Consensus 216 G~~~~i~~yd~~~~~W~~-~~~~~~~~-~~~-~~~~~l~~~~~--~~i~~~d~~~W~~~~~~p 273 (345)
+....+..+|..+.+-.. +....... .++ ..++.+++.++ +.+..+|..+++.+..+.
T Consensus 205 s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 205 SDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred cCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc
Confidence 677889999988765322 11111111 111 12445555544 788888888766555544
No 179
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.78 E-value=0.29 Score=47.23 Aligned_cols=116 Identities=16% Similarity=0.105 Sum_probs=73.9
Q ss_pred EEEECCEEEEEecCcceEEEEECCCC--CeeeccCCC-----------CCCceEEEcCeEEEEeC-cEEEEecCCc----
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGW-----------LQGPMAIVHDSVYLMSH-GLIIKQHRDV---- 265 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~~~~--~W~~~~~~~-----------~~~~~~~~~~~l~~~~~-~~i~~~d~~~---- 265 (345)
-++.++.||+... ...++++|.+++ .|+.-.... .....++.+++||+... +.++.+|.++
T Consensus 73 P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 73 PVVVDGIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEV 151 (677)
T ss_dssp CEEETTEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CEEECCEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEE
Confidence 3567999999873 577999999877 587654321 12345667889998875 7999999876
Q ss_pred eEEecc-chhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 266 RKVVAS-ASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 266 W~~~~~-~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
|+.-.. -+........+.+..++.||+..+..+. .....++.||.++++..|+.-
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY-------GVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEEE
T ss_pred eeecCCcCcCcCcccccCcEEECCEEEEEeccccc-------CCCCEEEEEECCCCcEEEEec
Confidence 886532 1100011222334567877765432211 122478999999887789764
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.78 E-value=1.6 Score=36.66 Aligned_cols=194 Identities=11% Similarity=-0.010 Sum_probs=96.1
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEE-ECCEEEEE----cCCCCCCCCCCCCCCCCcCcCc
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS-TAGKLFVL----GGGSDAVDPLTGDQDGSFATNE 129 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~lyv~----GG~~~~~~~~~~~~~~~~~~~~ 129 (345)
++.+|+... ....+..||+.+++...+...........-..++. -+|.+|+. |....... .. .........
T Consensus 79 dg~l~v~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~-~~--~~~~~~~~~ 154 (296)
T 3e5z_A 79 QGHLIACSH-GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG-YG--GEMELPGRW 154 (296)
T ss_dssp TCCEEEEET-TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGS-SC--CCCCSSSCE
T ss_pred CCcEEEEec-CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccc-cc--ccccCCCcE
Confidence 455665542 34679999998888776533211100011112333 36788886 32100000 00 000001347
Q ss_pred eEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCC-CCce-E--eCCCCCccCCCceeE
Q 019186 130 VWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPE-KDVW-V--PIPDLHRTHNSACTG 204 (345)
Q Consensus 130 ~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~-~~~W-~--~~~~~~~~~~~~~~~ 204 (345)
++++++. ++.+.+.... ..-.+++.. ++++++.... ...+++||.. +.+. . .+-..... . ..++
T Consensus 155 l~~~~~~-g~~~~~~~~~--~~~~gi~~s~dg~~lv~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~-~-p~~i 223 (296)
T 3e5z_A 155 VFRLAPD-GTLSAPIRDR--VKPNGLAFLPSGNLLVSDTG------DNATHRYCLNARGETEYQGVHFTVEPG-K-TDGL 223 (296)
T ss_dssp EEEECTT-SCEEEEECCC--SSEEEEEECTTSCEEEEETT------TTEEEEEEECSSSCEEEEEEEECCSSS-C-CCSE
T ss_pred EEEECCC-CCEEEeecCC--CCCccEEECCCCCEEEEeCC------CCeEEEEEECCCCcCcCCCeEeeCCCC-C-CCeE
Confidence 9999987 5443332111 111233333 5666544332 2468888876 4444 1 11111111 1 1122
Q ss_pred E-EECCEEEEEecCcceEEEEECCCCCeeeccCCCCCCceEEE--c-CeEEEEeCcEEEEecCCc
Q 019186 205 V-VIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--H-DSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 205 ~-~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~--~-~~l~~~~~~~i~~~d~~~ 265 (345)
+ --++.||+.. .+.+.+||+.......+........++.- + +.||+.....++.+++++
T Consensus 224 ~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 224 RVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWSIETNV 286 (296)
T ss_dssp EEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSCCCEEEEESTTSCEEEEEETTEEEEEECSC
T ss_pred EECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCCceeEEEECCCCCEEEEEcCCeEEEEEccc
Confidence 2 2367898887 57799999986555444322222222321 2 268888888888888765
No 181
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.75 E-value=0.3 Score=47.25 Aligned_cols=116 Identities=16% Similarity=0.098 Sum_probs=73.5
Q ss_pred EEEECCEEEEEecCcceEEEEECCCC--CeeeccCCCC-----------CCceEEEcCeEEEEeC-cEEEEecCCc----
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGWL-----------QGPMAIVHDSVYLMSH-GLIIKQHRDV---- 265 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~~~~--~W~~~~~~~~-----------~~~~~~~~~~l~~~~~-~~i~~~d~~~---- 265 (345)
-++.++.||+... ...++++|.+++ .|+.-..... ....++.+++||+... +.++.+|.++
T Consensus 66 P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 66 PIVVDGVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRA 144 (689)
T ss_dssp CEEETTEEEEECG-GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CEEECCEEEEEcC-CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEe
Confidence 3568999999873 567999999876 5876432211 2234667889988875 8999999876
Q ss_pred eEEecc-chhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 266 RKVVAS-ASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 266 W~~~~~-~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
|+.-.. -+........+-+..++.||+-.+..+. .....++.||.++.+..|+.-
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF-------GVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEEE
T ss_pred eeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc-------CCCCEEEEEECCCCcEEEEec
Confidence 887543 1111112222334568887774321111 122478999999887779763
No 182
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.75 E-value=1.8 Score=37.17 Aligned_cols=181 Identities=7% Similarity=-0.086 Sum_probs=95.4
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEE-EECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVV-STAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+|+.+.. ...++.||+.+++...+. .+. .-.+++ .-++++++... ..+++|
T Consensus 60 ~~~l~~~d~~-~~~i~~~d~~~~~~~~~~-~~~-----~v~~i~~~~dg~l~v~~~------------------~gl~~~ 114 (326)
T 2ghs_A 60 SGTAWWFNIL-ERELHELHLASGRKTVHA-LPF-----MGSALAKISDSKQLIASD------------------DGLFLR 114 (326)
T ss_dssp TTEEEEEEGG-GTEEEEEETTTTEEEEEE-CSS-----CEEEEEEEETTEEEEEET------------------TEEEEE
T ss_pred CCEEEEEECC-CCEEEEEECCCCcEEEEE-CCC-----cceEEEEeCCCeEEEEEC------------------CCEEEE
Confidence 3566666532 457899999888665442 222 112233 34788887642 248999
Q ss_pred eCCCCCcccCCCCCC----CceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-C
Q 019186 134 DPVTRQWSPRASMLV----PRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-G 208 (345)
Q Consensus 134 d~~t~~W~~~~~~~~----~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~ 208 (345)
|+.+++.+.+..... .+.....+--++++|+.............++.|| +.+.+.+.. .. ....+.+.. +
T Consensus 115 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~-~~~~~i~~s~d 189 (326)
T 2ghs_A 115 DTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DI-SIPNSICFSPD 189 (326)
T ss_dssp ETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EE-SSEEEEEECTT
T ss_pred ECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CC-cccCCeEEcCC
Confidence 998888765533221 1111112222677776432111112245688888 455544311 11 111222222 4
Q ss_pred C-EEEEEecCcceEEEEECC--CC-C------eeeccCCCC-CCceEE-EcCeEEEEe--CcEEEEecCCc
Q 019186 209 G-KVHVLHKGLSTVQVLDHM--GL-G------WTVEDYGWL-QGPMAI-VHDSVYLMS--HGLIIKQHRDV 265 (345)
Q Consensus 209 ~-~iyv~gG~~~~i~~yd~~--~~-~------W~~~~~~~~-~~~~~~-~~~~l~~~~--~~~i~~~d~~~ 265 (345)
+ .+|+.......+++||.. ++ . +........ ...++. -+|.+|+.. ++.+..||++.
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC
T ss_pred CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCC
Confidence 4 588876455789999975 44 2 222211111 112222 267888876 47899999854
No 183
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=94.71 E-value=0.01 Score=51.84 Aligned_cols=40 Identities=18% Similarity=0.196 Sum_probs=36.1
Q ss_pred cCCCCChHHHHHHhhccCCCcchhhHHHhhHHHHHhhcCh
Q 019186 3 ELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSP 42 (345)
Q Consensus 3 ~~~~~lp~~~~~~~l~~~p~~~~~~~~~~~~~w~~~~~~~ 42 (345)
+.|..||+|++.+|+.+++..+..++..||++|+.+..+|
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~ 46 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE 46 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCS
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCc
Confidence 4578999999999999999999999999999999987654
No 184
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.69 E-value=0.12 Score=44.99 Aligned_cols=153 Identities=9% Similarity=0.072 Sum_probs=77.0
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeeccC
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY 236 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~ 236 (345)
++.+++.||.++ .+.+||.+++.|.....+...+......+.. ++..++.|+....+..+|..++.+..+..
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~ 100 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT 100 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE
Confidence 566667776543 3888888888775322221111112222222 56677777767778888888776654322
Q ss_pred CCC---C-CceEE-EcCeEEEEeC--cEEEEecCCc---eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccc
Q 019186 237 GWL---Q-GPMAI-VHDSVYLMSH--GLIIKQHRDV---RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDI 306 (345)
Q Consensus 237 ~~~---~-~~~~~-~~~~l~~~~~--~~i~~~d~~~---W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~ 306 (345)
... . ..++. .++++++.++ +.+..+|..+ +..+..+.............-++.+++.|+.++
T Consensus 101 ~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-------- 172 (345)
T 3fm0_A 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD-------- 172 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS--------
T ss_pred ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC--------
Confidence 211 1 11111 2555555554 5666666543 333332221111111111222566777766443
Q ss_pred cccCceeeeccCCCCCceeEcCCCC
Q 019186 307 KPMSDVDVLTVGAERPTWRQVSPMT 331 (345)
Q Consensus 307 ~~~~~v~~yd~~~~~~~W~~v~~~~ 331 (345)
.|.+||..++ .|..+..+.
T Consensus 173 ----~i~~w~~~~~--~~~~~~~~~ 191 (345)
T 3fm0_A 173 ----TVKLYREEED--DWVCCATLE 191 (345)
T ss_dssp ----CEEEEEEETT--EEEEEEEEC
T ss_pred ----cEEEEEecCC--CEEEEEEec
Confidence 4677888776 676544443
No 185
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.63 E-value=1.9 Score=36.94 Aligned_cols=180 Identities=11% Similarity=-0.055 Sum_probs=100.4
Q ss_pred CcEEEEEecCCCCeEEEEeCCC----CCEEeCCCCCccccccceeEEEE--ECCEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAFDPENLWQLYDPLR----DLWITLPVLPSKIRHLAHFGVVS--TAGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~----~~W~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
++.||+... ....++.+++.. ..-..+-.... ..-.++++ .++.||+.-.. ..
T Consensus 41 ~~~ly~~D~-~~~~I~~~~~~g~~~~~~~~~~~~~~~----~~p~glavd~~~~~ly~~d~~----------------~~ 99 (316)
T 1ijq_A 41 SNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDI----QAPDGLAVDWIHSNIYWTDSV----------------LG 99 (316)
T ss_dssp TTEEEEEET-TTTEEEEEEC--------CEEEECSSC----SCCCEEEEETTTTEEEEEETT----------------TT
T ss_pred CCEEEEEEC-CCCcEEEEECCCCCCCcccEEEEeCCC----CCcCEEEEeecCCeEEEEECC----------------CC
Confidence 566777653 246788888875 22222211110 11124555 36889998542 34
Q ss_pred ceEEEeCCCCCcccCC--CCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeE
Q 019186 129 EVWSYDPVTRQWSPRA--SMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTG 204 (345)
Q Consensus 129 ~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~ 204 (345)
.+.++|+....-+.+. .+..+ .++++ .++.||+..... ...++++++....-+.+... ......++
T Consensus 100 ~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~-----~~~I~~~~~dG~~~~~~~~~--~~~~P~gl 169 (316)
T 1ijq_A 100 TVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTE--NIQWPNGI 169 (316)
T ss_dssp EEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCCEEEEECS--SCSCEEEE
T ss_pred EEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC-----CCeEEEEcCCCCCeEEEEEC--CCCCceEE
Confidence 6888988754332221 12222 23344 378899875311 25689999865443333111 10122233
Q ss_pred EEE--CCEEEEEecCcceEEEEECCCCCeeeccC----CCCCCceEEEcCeEEEEeC--cEEEEecCCc
Q 019186 205 VVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY----GWLQGPMAIVHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 205 ~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~----~~~~~~~~~~~~~l~~~~~--~~i~~~d~~~ 265 (345)
+.- +++||+.......|+++|+....-+.+.. ...+..+++.++.+|+... ..|..+++.+
T Consensus 170 a~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 170 TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred EEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCC
Confidence 333 68999998667889999987543333311 2224567778899999886 7888888644
No 186
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.60 E-value=1.9 Score=36.67 Aligned_cols=146 Identities=12% Similarity=0.048 Sum_probs=80.4
Q ss_pred eEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCC
Q 019186 95 FGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCR 172 (345)
Q Consensus 95 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~ 172 (345)
.+++.. ++.||+.... ...++++|+.++. ......+ ..-+++++. ++++|+......
T Consensus 35 egia~~~~g~lyv~d~~----------------~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~-- 93 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHE----------------VGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD-- 93 (306)
T ss_dssp EEEEECTTSCEEEEETT----------------TTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT--
T ss_pred ceEEECCCCCEEEEeCC----------------CCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC--
Confidence 345543 5778888532 3468999987643 2211111 223344443 678888753211
Q ss_pred CCCceEEEEeCCCCceEeCCCCCccCCCceeEE-EECCEEEEEecCcceEEEEECCCCC---eeecc---------CCCC
Q 019186 173 KSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGGKVHVLHKGLSTVQVLDHMGLG---WTVED---------YGWL 239 (345)
Q Consensus 173 ~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~iyv~gG~~~~i~~yd~~~~~---W~~~~---------~~~~ 239 (345)
...+..||+.+.+.+.+...+.. +.....+ ..++.+|+.......++++|+.+++ |...+ ....
T Consensus 94 --~~~v~~~d~~~g~~~~~~~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 94 --SIPVVSLVKSDGTVETLLTLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp --SCEEEEEECTTSCEEEEEECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred --cceEEEEcCCCCeEEEEEeCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 13578899888887765544433 2222222 2356788876446789999987642 21110 1111
Q ss_pred CCceEEEcCeEEEEeC--cEEEEecCC
Q 019186 240 QGPMAIVHDSVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 240 ~~~~~~~~~~l~~~~~--~~i~~~d~~ 264 (345)
...+..-++.||+... ..|+.|+.+
T Consensus 171 pngis~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 171 ANGLKRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEEBC
T ss_pred CCCcCcCCCEEEEEeCCCCEEEEEEeC
Confidence 1223223457998886 788888865
No 187
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.55 E-value=2.2 Score=37.36 Aligned_cols=143 Identities=10% Similarity=0.027 Sum_probs=72.4
Q ss_pred CeEEEEcCcCCCCCCCceEEEEeCCCCceEeC--CCCCccCCCceeEEEE---CCEEEEEecCcceEEEEECCCC--Cee
Q 019186 160 EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPI--PDLHRTHNSACTGVVI---GGKVHVLHKGLSTVQVLDHMGL--GWT 232 (345)
Q Consensus 160 ~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~--~~~~~~~~~~~~~~~~---~~~iyv~gG~~~~i~~yd~~~~--~W~ 232 (345)
+..++.|+.+ ..+.+||..+.+-... ...+..+......+.. ++.+++.|+....+..||++.. .-.
T Consensus 170 ~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~ 243 (380)
T 3iz6_a 170 ETRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR 243 (380)
T ss_dssp SSCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE
T ss_pred CCEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE
Confidence 3344555544 2488999988764322 1222221112222222 5678888887788999998632 222
Q ss_pred eccCCCC-CCceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhh-------cccceeEEEEECCeEEEEcceecCCC
Q 019186 233 VEDYGWL-QGPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEF-------RRRIGFAMIGMGDDIYVIGGVIGPDR 301 (345)
Q Consensus 233 ~~~~~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~-------~~r~~~~~~~~~~~l~i~GG~~~~~~ 301 (345)
....... ...++. .++..++.++ +.+..+|..+-+.+..+... .+.........++++++.|+.++
T Consensus 244 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--- 320 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--- 320 (380)
T ss_dssp EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS---
T ss_pred EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC---
Confidence 2221111 112222 2566666665 67888887662222111100 01112222334677777776432
Q ss_pred CcccccccCceeeeccCCC
Q 019186 302 WNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 302 ~~~~~~~~~~v~~yd~~~~ 320 (345)
.|.+||..+.
T Consensus 321 ---------~i~vwd~~~~ 330 (380)
T 3iz6_a 321 ---------DCYVWDTLLA 330 (380)
T ss_dssp ---------CEEEEETTTC
T ss_pred ---------CEEEEECCCC
Confidence 5788888665
No 188
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.55 E-value=0.35 Score=41.32 Aligned_cols=123 Identities=7% Similarity=0.054 Sum_probs=68.0
Q ss_pred ceEEEeCCCCC--cccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCC-ceEeCCCCCccCCCceeE
Q 019186 129 EVWSYDPVTRQ--WSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKD-VWVPIPDLHRTHNSACTG 204 (345)
Q Consensus 129 ~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~ 204 (345)
.+++|| .+++ |+.. ++. ....+.+.. ++.||+.. .. +..||+... .|+.- .+.. . ....
T Consensus 41 ~l~~~d-~~g~~~~~~~--~~~-~~~~~~~~~~~g~l~v~t--------~~-l~~~d~~g~~~~~~~--~~~~-~-~~~~ 103 (330)
T 3hxj_A 41 NLYAIN-TDGSVKWFFK--SGE-IIECRPSIGKDGTIYFGS--------DK-VYAINPDGTEKWRFD--TKKA-I-VSDF 103 (330)
T ss_dssp TTEEEC-TTSCEEESSC--GGG-EEEECCEETTTTEECCSS--------CE-EEEECCCGGGGGGSC--C-------CCE
T ss_pred EEEEEC-CCCcEEEEEe--cCC-CcccceEEecCCcEEEec--------Cc-EEEECCCCcEEEEEE--CCCC-c-ccCc
Confidence 588899 5654 5422 221 112233333 66766532 12 888987433 35422 1111 1 1122
Q ss_pred EEECCEEEEEecCcceEEEEECC-CCCeeeccCCCCCCceEEE-cCeEEEEeC-cEEEEecCCc---eEEe
Q 019186 205 VVIGGKVHVLHKGLSTVQVLDHM-GLGWTVEDYGWLQGPMAIV-HDSVYLMSH-GLIIKQHRDV---RKVV 269 (345)
Q Consensus 205 ~~~~~~iyv~gG~~~~i~~yd~~-~~~W~~~~~~~~~~~~~~~-~~~l~~~~~-~~i~~~d~~~---W~~~ 269 (345)
+..++.||+.. ....+++||+. ...|+...........+.. ++.+|+-.. ..++.||++. |+..
T Consensus 104 ~~~~~~l~v~t-~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~ 173 (330)
T 3hxj_A 104 TIFEDILYVTS-MDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFK 173 (330)
T ss_dssp EEETTEEEEEC-TTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEE
T ss_pred eEECCEEEEEe-cCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEe
Confidence 34488888764 45679999988 3457655433333334444 788888765 8999999864 6553
No 189
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.45 E-value=0.82 Score=43.17 Aligned_cols=115 Identities=15% Similarity=0.044 Sum_probs=69.4
Q ss_pred EEEECCEEEEEecCcceEEEEECCCC--CeeeccCCCC---------CCceEEEcCeEEEEeC-cEEEEecCCc----eE
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGWL---------QGPMAIVHDSVYLMSH-GLIIKQHRDV----RK 267 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~~~~--~W~~~~~~~~---------~~~~~~~~~~l~~~~~-~~i~~~d~~~----W~ 267 (345)
-++.++.+|+.... ..++++|.+++ .|+.-..... ....++.++++|+... ..++.+|.++ |+
T Consensus 64 P~v~~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~ 142 (582)
T 1flg_A 64 AIVSDGVIYVTASY-SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWK 142 (582)
T ss_dssp CEEETTEEEEEETT-TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEE
T ss_pred cEEECCEEEEEcCC-CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEee
Confidence 35689999998742 34999999876 5876543221 1344668899998765 8999999876 88
Q ss_pred EeccchhhcccceeEEEEECC------eEEEEcceecCCCCcccccccCceeeeccCCCCCceeE
Q 019186 268 VVASASEFRRRIGFAMIGMGD------DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQ 326 (345)
Q Consensus 268 ~~~~~p~~~~r~~~~~~~~~~------~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~ 326 (345)
.-...+........+-+..++ .||+ |...... .....++.||+++.+..|+.
T Consensus 143 ~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~------~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 143 KKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEF------GVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGG------CCBCEEEEECTTTCCEEEEE
T ss_pred ecCCCCCcCcccccCCEEeCCCcCCcEEEEE-ecccccc------CCCCEEEEEECCCCCEEeec
Confidence 643221100011112233444 4544 4321100 12247899999988778965
No 190
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.43 E-value=2.1 Score=40.37 Aligned_cols=108 Identities=18% Similarity=0.137 Sum_probs=68.3
Q ss_pred eeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCccCC-----CceeEEEECCEEEEEecCcceEEEEE
Q 019186 153 FACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHRTHN-----SACTGVVIGGKVHVLHKGLSTVQVLD 225 (345)
Q Consensus 153 ~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~-----~~~~~~~~~~~iyv~gG~~~~i~~yd 225 (345)
.+.++.++++|+.... ..+..+|.++.+ |+.-...+.... ...+.+..++++|+.. ....++++|
T Consensus 62 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t-~dg~l~AlD 133 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT-LDASVVALN 133 (582)
T ss_dssp CCCEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE-TTTEEEEEE
T ss_pred eccEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe-CCCEEEEEE
Confidence 3446779999998653 238899988764 875433221100 1123456899998865 456899999
Q ss_pred CCCC--CeeeccCCC-----CCCceEEEcC------eEEEEe-------CcEEEEecCCc----eEE
Q 019186 226 HMGL--GWTVEDYGW-----LQGPMAIVHD------SVYLMS-------HGLIIKQHRDV----RKV 268 (345)
Q Consensus 226 ~~~~--~W~~~~~~~-----~~~~~~~~~~------~l~~~~-------~~~i~~~d~~~----W~~ 268 (345)
.+++ .|+.-.... ...+-++.++ .+|+-. .+.++.+|.++ |+.
T Consensus 134 ~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 134 KNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp SSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 9877 487543221 1233445667 777643 26899999876 865
No 191
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.43 E-value=2.3 Score=37.06 Aligned_cols=178 Identities=11% Similarity=-0.057 Sum_probs=100.0
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.||+... ....++.+++....-+.+..... ..-.++++. ++.||+.-.. ...+++
T Consensus 84 ~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~ly~~d~~----------------~~~I~~ 142 (349)
T 3v64_C 84 RELVFWSDV-TLDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDKLYWTDSG----------------TSRIEV 142 (349)
T ss_dssp TTEEEEEET-TTTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTEEEEEETT----------------TTEEEE
T ss_pred ccEEEEEec-cCCceEEEecCCCCceEEEeCCC----CCccEEEEecCCCeEEEEcCC----------------CCeEEE
Confidence 344554432 23466677776654443321111 111234443 6889988542 357888
Q ss_pred EeCCCCCcccCC--CCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE--
Q 019186 133 YDPVTRQWSPRA--SMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV-- 206 (345)
Q Consensus 133 yd~~t~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-- 206 (345)
+++....-+.+. .+..+ .++++- ++.||+..... ...++++++....-+.+.. .......+++.
T Consensus 143 ~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~--~~~~~PnGla~d~ 212 (349)
T 3v64_C 143 ANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIAD--THLFWPNGLTIDY 212 (349)
T ss_dssp EETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCC--SSCSCEEEEEEET
T ss_pred EcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEE--CCCCCcceEEEeC
Confidence 988765433221 12222 233443 68899885321 3579999987654444322 11012233333
Q ss_pred ECCEEEEEecCcceEEEEECCCCCeee-cc-CCCCCCceEEEcCeEEEEeC--cEEEEecC
Q 019186 207 IGGKVHVLHKGLSTVQVLDHMGLGWTV-ED-YGWLQGPMAIVHDSVYLMSH--GLIIKQHR 263 (345)
Q Consensus 207 ~~~~iyv~gG~~~~i~~yd~~~~~W~~-~~-~~~~~~~~~~~~~~l~~~~~--~~i~~~d~ 263 (345)
.+++||+.......|+++|+....-.. +. ....+..+++.++.||+.+. ..|..++.
T Consensus 213 ~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 213 AGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK 273 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEc
Confidence 278999997667889999987543222 22 22235667778999999986 67777764
No 192
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.41 E-value=2.7 Score=37.74 Aligned_cols=237 Identities=8% Similarity=-0.043 Sum_probs=114.0
Q ss_pred CcEEEEEecCCCCeEEEEeCC--CCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceE
Q 019186 55 ENLLCVCAFDPENLWQLYDPL--RDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVW 131 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~--~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~ 131 (345)
+..|++.|+. ...+.+||.. +++.... +........-.+++.. ++..++.|+. ...++
T Consensus 114 ~~~l~~~~~~-dg~v~iwd~~~~~~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~~~~~----------------~g~v~ 174 (450)
T 2vdu_B 114 ESRLIACADS-DKSLLVFDVDKTSKNVLKL--RKRFCFSKRPNAISIAEDDTTVIIADK----------------FGDVY 174 (450)
T ss_dssp SSEEEEEEGG-GTEEEEEEECSSSSSCEEE--EEEEECSSCEEEEEECTTSSEEEEEET----------------TSEEE
T ss_pred CCEEEEEECC-CCeEEEEECcCCCCceeee--eecccCCCCceEEEEcCCCCEEEEEeC----------------CCcEE
Confidence 4555566643 3578888887 4432221 1100000111233333 5566666653 24588
Q ss_pred EEeCCCCCccc--CCCCCCCc-eeeeeeEe-C---CeEEEEcCcCCCCCCCceEEEEeCCCCceEeC-CCCCccCCCcee
Q 019186 132 SYDPVTRQWSP--RASMLVPR-AMFACCAL-K---EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPI-PDLHRTHNSACT 203 (345)
Q Consensus 132 ~yd~~t~~W~~--~~~~~~~r-~~~~~~~~-~---~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~ 203 (345)
.++..+.+... ...+.... .-.+++.. + +.+++.|+.+ ..+.+||..+..-... ..-... .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h~~-~v~~~ 247 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHIKISHYPQCFIVDKWLFGHKH-FVSSI 247 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT------SCEEEEEESCTTCEEEECCCCSS-CEEEE
T ss_pred EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC------CcEEEEECCCCceeeeeecCCCC-ceEEE
Confidence 88887665432 11221111 11222222 5 6677777654 2488899877653321 110111 11112
Q ss_pred EEEECCEEEEEecCcceEEEEECCCCCeeeccCC------------------------CCCC---ceEEE--cCeEEEEe
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYG------------------------WLQG---PMAIV--HDSVYLMS 254 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~------------------------~~~~---~~~~~--~~~l~~~~ 254 (345)
.+. ++.+++.|+....+..||..+++....-.. .... .++.. +..|++.+
T Consensus 248 ~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 248 CCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 223 777777777778899999988764321110 0000 11111 34555555
Q ss_pred -C-cEEEEecC--Cc---eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCcee
Q 019186 255 -H-GLIIKQHR--DV---RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWR 325 (345)
Q Consensus 255 -~-~~i~~~d~--~~---W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~ 325 (345)
. +.+..|+. .. ++.+..++. ...-..++...+.+++..+........ ...-+++.++..++ .|.
T Consensus 327 ~~d~~i~iw~~~~~~~~~l~~~~~~~~--~~~v~~~~~~~~~~~v~~~~~~~~~~~---~~~i~v~~~~~~~~--~~~ 397 (450)
T 2vdu_B 327 EATKCIIILEMSEKQKGDLALKQIITF--PYNVISLSAHNDEFQVTLDNKESSGVQ---KNFAKFIEYNLNEN--SFV 397 (450)
T ss_dssp TTCSEEEEEEECSSSTTCEEEEEEEEC--SSCEEEEEEETTEEEEEECCTTCCSSC---CCSEEEEEEETTTT--EEE
T ss_pred CCCCeEEEEEeccCCCCceeeccEecc--CCceEEEEecCCcEEEEEecccCCCCC---CcceEEEEEEcCCC--eEE
Confidence 3 67777776 22 565555542 122234455566777765532211000 11225666677766 664
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.37 E-value=1.1 Score=42.27 Aligned_cols=185 Identities=15% Similarity=0.012 Sum_probs=88.4
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.+|+... ..+.+.++|..+++-.. .++.. ..-|.++.. ++ .+|+.+. ...+.+
T Consensus 166 ~~~~~V~~~-~~~~V~viD~~t~~v~~--~i~~g---~~p~~v~~SpDGr~lyv~~~-----------------dg~V~v 222 (567)
T 1qks_A 166 ENLFSVTLR-DAGQIALIDGSTYEIKT--VLDTG---YAVHISRLSASGRYLFVIGR-----------------DGKVNM 222 (567)
T ss_dssp GGEEEEEET-TTTEEEEEETTTCCEEE--EEECS---SCEEEEEECTTSCEEEEEET-----------------TSEEEE
T ss_pred CceEEEEeC-CCCeEEEEECCCCeEEE--EEeCC---CCccceEECCCCCEEEEEcC-----------------CCeEEE
Confidence 456776653 45789999999886432 22221 122244443 44 5777642 246999
Q ss_pred EeCCCCCcccCCCCCCCceeeeeeEe-----CC-eEEEEcCcCCCCCCCceEEEEeCCCCceEe-CC--CCC--------
Q 019186 133 YDPVTRQWSPRASMLVPRAMFACCAL-----KE-KIVVAGGFTSCRKSISQAEMYDPEKDVWVP-IP--DLH-------- 195 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~~~~~~~-----~~-~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~-~~--~~~-------- 195 (345)
+|+.+.+-+.+..++....-..+++. ++ .+|+..-. .+.+.++|..+.+=.. ++ .++
T Consensus 223 iD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p 296 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHP 296 (567)
T ss_dssp EETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEES
T ss_pred EECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccC
Confidence 99952222333333332222344444 45 56665432 2458888977754321 21 111
Q ss_pred ccCCCceeEEEEC-CEEEEEecCcceEEEEECCCCCeeeccC---CCCCCce-EEEcCe-EEEEeC--cEEEEecCCceE
Q 019186 196 RTHNSACTGVVIG-GKVHVLHKGLSTVQVLDHMGLGWTVEDY---GWLQGPM-AIVHDS-VYLMSH--GLIIKQHRDVRK 267 (345)
Q Consensus 196 ~~~~~~~~~~~~~-~~iyv~gG~~~~i~~yd~~~~~W~~~~~---~~~~~~~-~~~~~~-l~~~~~--~~i~~~d~~~W~ 267 (345)
.+ +.....+..+ ...++.-.....+...|....+...+.. ....+.. ...+++ +|+... +.+..+|.++-+
T Consensus 297 ~~-rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 297 EP-RVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp CC-CEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred CC-ceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 11 1111111222 2333332245677777776554322211 1111111 112444 344443 788899988743
Q ss_pred Ee
Q 019186 268 VV 269 (345)
Q Consensus 268 ~~ 269 (345)
.+
T Consensus 376 l~ 377 (567)
T 1qks_A 376 LV 377 (567)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 194
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.36 E-value=2.2 Score=36.64 Aligned_cols=193 Identities=11% Similarity=0.047 Sum_probs=105.8
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcc--
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWS-- 141 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~-- 141 (345)
..++...|+....-.. .++.. ....-.++... ++.||+.--. ...++++++....-.
T Consensus 12 ~~~I~~i~l~~~~~~~--~~~~~-~~~~~~~ld~d~~~~~lyw~D~~----------------~~~I~r~~~~g~~~~~~ 72 (318)
T 3sov_A 12 RRDLRLVDATNGKENA--TIVVG-GLEDAAAVDFVFSHGLIYWSDVS----------------EEAIKRTEFNKTESVQN 72 (318)
T ss_dssp EEEEEEEETTCTTSCC--EEEEE-EEEEEEEEEEEGGGTEEEEEETT----------------TTEEEEEETTSSSCCCE
T ss_pred cCeEEEEECCCCceEE--EEEec-CCCccEEEEEEeCCCEEEEEECC----------------CCcEEEEEccCCCceEE
Confidence 3577788887653110 01111 00122334443 5789998542 357889998765311
Q ss_pred -cCCCCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeC--CCCCccCCCceeEEEE--CCEEEEE
Q 019186 142 -PRASMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPI--PDLHRTHNSACTGVVI--GGKVHVL 214 (345)
Q Consensus 142 -~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~--~~~~~~~~~~~~~~~~--~~~iyv~ 214 (345)
....+. .-.++++ .++.||+.-.. ...++++++....-+.+ ..+..+ .++++. ++.||+.
T Consensus 73 ~~~~~l~---~p~glavd~~~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~~~~P----~giavdp~~g~ly~t 139 (318)
T 3sov_A 73 VVVSGLL---SPDGLACDWLGEKLYWTDSE------TNRIEVSNLDGSLRKVLFWQELDQP----RAIALDPSSGFMYWT 139 (318)
T ss_dssp EEEECCS---CCCEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSSE----EEEEEEGGGTEEEEE
T ss_pred EEcCCCC---CccEEEEEcCCCeEEEEECC------CCEEEEEECCCCcEEEEEeCCCCCc----cEEEEeCCCCEEEEE
Confidence 111111 1123444 47899988532 34689999876543322 122222 233333 5899998
Q ss_pred e-cCcceEEEEECCCCCeeec-cCCC-CCCceEEE--cCeEEEEeC--cEEEEecCCc--eEEeccchhhcccceeEEEE
Q 019186 215 H-KGLSTVQVLDHMGLGWTVE-DYGW-LQGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIG 285 (345)
Q Consensus 215 g-G~~~~i~~yd~~~~~W~~~-~~~~-~~~~~~~~--~~~l~~~~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~ 285 (345)
. |....|+++++....-+.+ .... .+..+++- +++||+.+. ..|+.+|.+. -+.+..- ......+++.
T Consensus 140 d~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~---~~~~P~glav 216 (318)
T 3sov_A 140 DWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG---SLPHPFALTL 216 (318)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---CCSCEEEEEE
T ss_pred ecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecC---CCCCceEEEE
Confidence 6 3467899999875433322 2221 23344443 789999987 7888887764 3333221 1223467777
Q ss_pred ECCeEEEE
Q 019186 286 MGDDIYVI 293 (345)
Q Consensus 286 ~~~~l~i~ 293 (345)
.++.+|+.
T Consensus 217 ~~~~lywt 224 (318)
T 3sov_A 217 FEDILYWT 224 (318)
T ss_dssp ETTEEEEE
T ss_pred eCCEEEEE
Confidence 78888887
No 195
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.33 E-value=0.94 Score=38.92 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=34.3
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--C--CEEEEEecCcceEEEEECCC
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G--GKVHVLHKGLSTVQVLDHMG 228 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~--~~iyv~gG~~~~i~~yd~~~ 228 (345)
++.+++.|+.++ .+.+||..+..|..+..+... ......+.. + +...+.|+.-..+..+|..+
T Consensus 164 ~~~~l~s~s~D~------~i~iW~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 164 SEALLASSSYDD------TVRIWKDYDDDWECVAVLNGH-EGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SSSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCEEEEEcCCC------eEEEEECCCCCeeEEEEccCC-CCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 566667776553 378888877777655443322 112222222 2 34555665556677777643
No 196
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.31 E-value=0.69 Score=41.33 Aligned_cols=99 Identities=13% Similarity=0.016 Sum_probs=54.1
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEe-CCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeecc
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVP-IPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVED 235 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~ 235 (345)
++.+++.|+.+ ..+.+||..+.+-.. +...+.. . ....+.. ++..++.|+....+..||+.+++....-
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~-~-~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRH-G-AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSW 252 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGG-C-CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCC-C-ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEE
Confidence 46666666654 358999998865322 2211122 1 2222333 6677777777788999999886553321
Q ss_pred CCCCCCceEEE--------cCeEEEEeC--cEEEEecCCc
Q 019186 236 YGWLQGPMAIV--------HDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 236 ~~~~~~~~~~~--------~~~l~~~~~--~~i~~~d~~~ 265 (345)
.......+..+ ++.+++.++ +.+..+|..+
T Consensus 253 ~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 253 SFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp BCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred ecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 11111112112 344555555 6688888765
No 197
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.21 E-value=0.65 Score=39.76 Aligned_cols=143 Identities=14% Similarity=0.036 Sum_probs=80.2
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEE
Q 019186 101 AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAE 179 (345)
Q Consensus 101 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~ 179 (345)
+++||+.+.. ...+++||+.+++.+.+.... ...-.+++.. ++++|+...... .....+.
T Consensus 55 ~g~l~~~~~~----------------~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~ 115 (333)
T 2dg1_A 55 QGQLFLLDVF----------------EGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF--KSTGGIF 115 (333)
T ss_dssp TSCEEEEETT----------------TCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS--SSCCEEE
T ss_pred CCCEEEEECC----------------CCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC--CCCceEE
Confidence 5778887653 246999999988776543111 1112333332 678887753221 1135689
Q ss_pred EEeCCCCceEe-CCCCCccCCCceeEEEE--CCEEEEEecC------cceEEEEECCCCCeeeccCCCC-CCceEE-EcC
Q 019186 180 MYDPEKDVWVP-IPDLHRTHNSACTGVVI--GGKVHVLHKG------LSTVQVLDHMGLGWTVEDYGWL-QGPMAI-VHD 248 (345)
Q Consensus 180 ~yd~~~~~W~~-~~~~~~~~~~~~~~~~~--~~~iyv~gG~------~~~i~~yd~~~~~W~~~~~~~~-~~~~~~-~~~ 248 (345)
+||+++..... +...... . ....+.. ++.+|+.... ...++++|+.+++...+..... ...++. .++
T Consensus 116 ~~d~~~~~~~~~~~~~~~~-~-~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTA-Y-CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE 193 (333)
T ss_dssp EECTTSCSCEEEECSSSSC-C-CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS
T ss_pred EEeCCCCEEEEEEccCccC-C-cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC
Confidence 99998877552 2221111 1 2222333 6788887531 3679999988776655422111 112222 244
Q ss_pred -eEEEEeC--cEEEEecCC
Q 019186 249 -SVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 249 -~l~~~~~--~~i~~~d~~ 264 (345)
.||+.+. ..++.||.+
T Consensus 194 ~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALE 212 (333)
T ss_dssp SEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCeEEEEEec
Confidence 4777764 688888863
No 198
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.20 E-value=0.95 Score=38.88 Aligned_cols=129 Identities=9% Similarity=-0.020 Sum_probs=65.3
Q ss_pred CceEEEeCCCCCcccCCCCCCCce-eeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRA-MFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV 205 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~-~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~ 205 (345)
..+.+||..+........+..... -.+++.. ++..++.|+.+ ..+.+||..+.+-........ .-.++.
T Consensus 64 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~---~v~~~~ 134 (368)
T 3mmy_A 64 NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD------KTAKMWDLSSNQAIQIAQHDA---PVKTIH 134 (368)
T ss_dssp SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSS---CEEEEE
T ss_pred CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC------CcEEEEEcCCCCceeeccccC---ceEEEE
Confidence 458888887633221111111111 1222222 56666666543 358999999887554322111 122222
Q ss_pred E---ECCEEEEEecCcceEEEEECCCCCeeec-cCCCCCCceEEEcCeEEEEeC-cEEEEecCCc
Q 019186 206 V---IGGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIVHDSVYLMSH-GLIIKQHRDV 265 (345)
Q Consensus 206 ~---~~~~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~l~~~~~-~~i~~~d~~~ 265 (345)
. -++.+++.++....+..||+.+++-... ........+....+.+++... +.+..|+...
T Consensus 135 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 199 (368)
T 3mmy_A 135 WIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLEN 199 (368)
T ss_dssp EEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSS
T ss_pred EEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecc
Confidence 2 2567777777778899999887643221 111111222333444444444 6666776654
No 199
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.17 E-value=0.52 Score=44.69 Aligned_cols=118 Identities=13% Similarity=0.069 Sum_probs=72.4
Q ss_pred EEEECCEEEEEecCcceEEEEEC-CCC--CeeeccCCCC-----------CCceEE--EcCe----EEEEeC-cEEEEec
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDH-MGL--GWTVEDYGWL-----------QGPMAI--VHDS----VYLMSH-GLIIKQH 262 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~-~~~--~W~~~~~~~~-----------~~~~~~--~~~~----l~~~~~-~~i~~~d 262 (345)
-++.++.||+.......++++|. +++ .|+.-..... ....++ .+++ ||+... ..++.+|
T Consensus 58 P~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlD 137 (599)
T 1w6s_A 58 PLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALN 137 (599)
T ss_dssp CEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEE
T ss_pred cEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEE
Confidence 35679999998732567999999 766 5876543221 123455 5777 888765 8999999
Q ss_pred CCc----eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcC
Q 019186 263 RDV----RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVS 328 (345)
Q Consensus 263 ~~~----W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~ 328 (345)
.++ |+.-..-+........+-+..+++||+-++..+. .....+..||.++.+..|+.-.
T Consensus 138 a~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~-------g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 138 AETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL-------GVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG-------TCCCEEEEEETTTCCEEEEEES
T ss_pred CCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc-------CCCCeEEEEECCCCcEEEEEcC
Confidence 876 8864221100011222334568877764332111 0224789999998877897643
No 200
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.13 E-value=2.3 Score=39.54 Aligned_cols=139 Identities=6% Similarity=-0.048 Sum_probs=75.2
Q ss_pred CeEEEEcCc-CCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeeccC
Q 019186 160 EKIVVAGGF-TSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY 236 (345)
Q Consensus 160 ~~iyv~gG~-~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~ 236 (345)
+..++.|+. + ..+.+||..+..... ..+... ......+.. ++++++.|+....+..||..+.+-...-.
T Consensus 456 ~~~l~~~~~~d------~~i~~~~~~~~~~~~-~~~~~~-~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~ 527 (615)
T 1pgu_A 456 QNYVAVGLEEG------NTIQVFKLSDLEVSF-DLKTPL-RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRW 527 (615)
T ss_dssp SSEEEEEETTT------SCEEEEETTEEEEEE-ECSSCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCS
T ss_pred CCEEEEeecCC------CeEEEEECCCccccc-cccCCc-cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEee
Confidence 556666654 3 248999998876542 222222 222233333 67777777777889999998765433211
Q ss_pred C--CCCCceEEE------------cCeEEEEeC--cEEEEecCCce-EEeccchhhcccceeEEEEECCeEEEEcceecC
Q 019186 237 G--WLQGPMAIV------------HDSVYLMSH--GLIIKQHRDVR-KVVASASEFRRRIGFAMIGMGDDIYVIGGVIGP 299 (345)
Q Consensus 237 ~--~~~~~~~~~------------~~~l~~~~~--~~i~~~d~~~W-~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~ 299 (345)
. ......+.. ++.+++.++ +.+..+|.++. +.+..+.............-+++ ++.||.++
T Consensus 528 ~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~- 605 (615)
T 1pgu_A 528 AFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADA- 605 (615)
T ss_dssp CCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTS-
T ss_pred cCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCc-
Confidence 1 111111222 566666665 67888887763 33333321112222333345777 77766433
Q ss_pred CCCcccccccCceeeeccCC
Q 019186 300 DRWNWDIKPMSDVDVLTVGA 319 (345)
Q Consensus 300 ~~~~~~~~~~~~v~~yd~~~ 319 (345)
.|.+||+++
T Consensus 606 -----------~v~iw~~~~ 614 (615)
T 1pgu_A 606 -----------CIKRWNVVL 614 (615)
T ss_dssp -----------CEEEEEEC-
T ss_pred -----------eEEEEeeec
Confidence 467777764
No 201
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.10 E-value=2.2 Score=40.88 Aligned_cols=182 Identities=10% Similarity=0.072 Sum_probs=88.7
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCC-ceeeeeeEe-CCeEEEEcCcCCCCCCCceE
Q 019186 101 AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVP-RAMFACCAL-KEKIVVAGGFTSCRKSISQA 178 (345)
Q Consensus 101 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v 178 (345)
++.+++.|+. ...+.+||..+++-... +... ..-.+++.. ++..++.|+.++ .+
T Consensus 441 ~g~~l~sgs~----------------Dg~v~vwd~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D~------~i 496 (694)
T 3dm0_A 441 DGQFALSGSW----------------DGELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRDR------TI 496 (694)
T ss_dssp TSSEEEEEET----------------TSEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETTS------CE
T ss_pred CCCEEEEEeC----------------CCcEEEEECCCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCCC------EE
Confidence 5667777764 34688899877643211 1111 111222222 555556665443 47
Q ss_pred EEEeCCCCceEeCCCCCccCCCceeEEEE--CC--EEEEEecCcceEEEEECCCCCeeec-cCCCCC-CceEE-EcCeEE
Q 019186 179 EMYDPEKDVWVPIPDLHRTHNSACTGVVI--GG--KVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQ-GPMAI-VHDSVY 251 (345)
Q Consensus 179 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~--~iyv~gG~~~~i~~yd~~~~~W~~~-~~~~~~-~~~~~-~~~~l~ 251 (345)
.+||.....-..+......+......+.. ++ ..++.|+....+..+|+.+.+-... ...... ..++. .++.++
T Consensus 497 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l 576 (694)
T 3dm0_A 497 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLC 576 (694)
T ss_dssp EEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEE
Confidence 88887655322222211111222233333 22 3566666777899999987754332 111111 11222 256666
Q ss_pred EEeC--cEEEEecCCceEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 252 LMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 252 ~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.++ +.|..+|..+-+.+..+.. ...-.+++...+..+++++.+ ..|.+||+.+.
T Consensus 577 ~sg~~Dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~~~~~------------~~i~iwd~~~~ 633 (694)
T 3dm0_A 577 ASGGKDGVVLLWDLAEGKKLYSLEA--NSVIHALCFSPNRYWLCAATE------------HGIKIWDLESK 633 (694)
T ss_dssp EEEETTSBCEEEETTTTEEEECCBC--SSCEEEEEECSSSSEEEEEET------------TEEEEEETTTT
T ss_pred EEEeCCCeEEEEECCCCceEEEecC--CCcEEEEEEcCCCcEEEEEcC------------CCEEEEECCCC
Confidence 6655 6788888776444443331 112233333333334443321 14778888765
No 202
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.09 E-value=2.1 Score=41.59 Aligned_cols=137 Identities=12% Similarity=0.085 Sum_probs=79.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC--CCCCceeeeeeE-eCCeEEEEcCcCCCCCCCce
Q 019186 101 AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS--MLVPRAMFACCA-LKEKIVVAGGFTSCRKSISQ 177 (345)
Q Consensus 101 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~ 177 (345)
++.|++++|. ...+++||+.+++++.... +.......++.. .++.|++.. . + -
T Consensus 482 ~g~lWi~~~t----------------~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~-~------G 537 (758)
T 3ott_A 482 EGNVWVLLYN----------------NKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H-G------G 537 (758)
T ss_dssp TSCEEEEETT----------------CSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T-T------E
T ss_pred CCCEEEEccC----------------CCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c-C------c
Confidence 5779986654 2458999999988876532 111111122222 257777543 1 1 2
Q ss_pred EEEEeCCCCceEeCC--CCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCeeeccCCCC-CCceEEE--cCeEEE
Q 019186 178 AEMYDPEKDVWVPIP--DLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QGPMAIV--HDSVYL 252 (345)
Q Consensus 178 v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~~--~~~l~~ 252 (345)
+..||+++++++... .++.. ...+++.-++.|++.. ...+.+||+++.+......... ...++.. +|.||+
T Consensus 538 l~~~~~~~~~~~~~~~~gl~~~--~i~~i~~~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~f 613 (758)
T 3ott_A 538 VMRINPKDESQQSISFGSFSNN--EILSMTCVKNSIWVST--TNGLWIIDRKTMDARQQNMTNKRFTSLLFDPKEDCVYL 613 (758)
T ss_dssp EEEECC--CCCCBCCCCC---C--CEEEEEEETTEEEEEE--SSCEEEEETTTCCEEEC--CCCCCSEEEEETTTTEEEE
T ss_pred eEEEecCCCceEEecccCCCcc--ceEEEEECCCCEEEEC--CCCeEEEcCCCceeEEecCCCCceeeeEEECCCCcEEE
Confidence 899999998876552 23332 2233445588898876 5679999999988775421111 1122222 677777
Q ss_pred EeCcEEEEecCCc
Q 019186 253 MSHGLIIKQHRDV 265 (345)
Q Consensus 253 ~~~~~i~~~d~~~ 265 (345)
-+..-+..++|+.
T Consensus 614 G~~~Gl~~f~p~~ 626 (758)
T 3ott_A 614 GGADGFGISHSNL 626 (758)
T ss_dssp ECBSEEEEEEC--
T ss_pred ecCCceEEEChhh
Confidence 7768888888875
No 203
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.03 E-value=0.82 Score=44.56 Aligned_cols=183 Identities=5% Similarity=-0.069 Sum_probs=88.6
Q ss_pred EEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCC
Q 019186 58 LCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPV 136 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~ 136 (345)
.++.|+. ...+.+||..+++....- ... ...-.+++.. ++..++.|+. ...+.+||..
T Consensus 69 ~l~~~~~-dg~i~vw~~~~~~~~~~~--~~~--~~~v~~~~~s~~~~~l~~~~~----------------dg~i~vw~~~ 127 (814)
T 3mkq_A 69 WIIVGSD-DFRIRVFNYNTGEKVVDF--EAH--PDYIRSIAVHPTKPYVLSGSD----------------DLTVKLWNWE 127 (814)
T ss_dssp EEEEEET-TSEEEEEETTTCCEEEEE--ECC--SSCEEEEEECSSSSEEEEEET----------------TSEEEEEEGG
T ss_pred EEEEEeC-CCeEEEEECCCCcEEEEE--ecC--CCCEEEEEEeCCCCEEEEEcC----------------CCEEEEEECC
Confidence 3444433 467899999887653321 111 0122233333 4555556553 2468888886
Q ss_pred CCCcccCCCCCCC-ceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE-E--CCE
Q 019186 137 TRQWSPRASMLVP-RAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV-I--GGK 210 (345)
Q Consensus 137 t~~W~~~~~~~~~-r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~--~~~ 210 (345)
++ |.....+... ..-.+++.. ++..++.|+.+ ..+.+||..+..-...-..... ........ . ++.
T Consensus 128 ~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~ 199 (814)
T 3mkq_A 128 NN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKP 199 (814)
T ss_dssp GT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEECCCT-TCCCEEEECCSTTCC
T ss_pred CC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEecCCC-CCEEEEEEEECCCCC
Confidence 65 2211111111 111223332 45666666644 3488999866542111111111 11112222 2 667
Q ss_pred EEEEecCcceEEEEECCCCCeee-ccCCCCCC-ceE-EEcCeEEEEeC--cEEEEecCCceEEe
Q 019186 211 VHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQG-PMA-IVHDSVYLMSH--GLIIKQHRDVRKVV 269 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~W~~-~~~~~~~~-~~~-~~~~~l~~~~~--~~i~~~d~~~W~~~ 269 (345)
.+++|+....+..||..+++-.. +....... .++ ..++.+++.++ +.+..+|..+++.+
T Consensus 200 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 200 YMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 77777777889999987765322 11111111 111 12454455444 67888887764433
No 204
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.96 E-value=0.62 Score=39.98 Aligned_cols=129 Identities=10% Similarity=-0.059 Sum_probs=66.3
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe-C---CeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCccCCCc
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL-K---EKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHRTHNSA 201 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~---~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~ 201 (345)
..+.+||..+++............-.+++.. + +.+++.|+.++ .+.+||..+.. -..+...... -
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~~~~~---v 114 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG------NLHIWNLEAPEMPVYSVKGHKEI---I 114 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS------CEEEECTTSCSSCSEEECCCSSC---E
T ss_pred cEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC------eEEEEeCCCCCccEEEEEecccc---e
Confidence 4688899887765433222111112222222 2 46666666543 48899988765 2222211111 1
Q ss_pred eeEE-------EECCEEEEEecCcceEEEEECCCCC--eeeccCCCC----CCceEE------EcCeEEEEeC--cEEEE
Q 019186 202 CTGV-------VIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL----QGPMAI------VHDSVYLMSH--GLIIK 260 (345)
Q Consensus 202 ~~~~-------~~~~~iyv~gG~~~~i~~yd~~~~~--W~~~~~~~~----~~~~~~------~~~~l~~~~~--~~i~~ 260 (345)
.++. .-++..++.|+....+..||+.+.. ...+..... ...... .++.+++.++ +.+..
T Consensus 115 ~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i 194 (357)
T 3i2n_A 115 NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKL 194 (357)
T ss_dssp EEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEE
T ss_pred EEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEE
Confidence 1111 1356666777677789999998764 333321111 111111 3566666655 78888
Q ss_pred ecCCc
Q 019186 261 QHRDV 265 (345)
Q Consensus 261 ~d~~~ 265 (345)
||..+
T Consensus 195 ~d~~~ 199 (357)
T 3i2n_A 195 FDLRN 199 (357)
T ss_dssp EETTT
T ss_pred EECcc
Confidence 88877
No 205
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=93.87 E-value=1.4 Score=37.73 Aligned_cols=194 Identities=13% Similarity=-0.010 Sum_probs=97.4
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCC--CCCCcCcCce
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGD--QDGSFATNEV 130 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~--~~~~~~~~~~ 130 (345)
++.||+... ...+..+|+.+++.+.+...........-..+++. +|.||+.-....... .... .........+
T Consensus 91 ~g~l~v~d~--~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~-~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 91 NNQLYIVDC--YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDD-RGVQQIMDTSDKTGRL 167 (322)
T ss_dssp TTEEEEEET--TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCT-TCHHHHHHHTCCCEEE
T ss_pred CCcEEEEEC--CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccc-cccceehcccCCCceE
Confidence 567887743 24588999887765554322111000112234444 578998753210000 0000 0000013569
Q ss_pred EEEeCCCCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCCCC---ceEeCCCCCccCCCceeEE
Q 019186 131 WSYDPVTRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPEKD---VWVPIPDLHRTHNSACTGV 205 (345)
Q Consensus 131 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~~~---~W~~~~~~~~~~~~~~~~~ 205 (345)
++||+.+++.+.+..- ...-.++++. ++ .+|+.-.. .+.+.+||.... ..+.+..++. ...+
T Consensus 168 ~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~~~~g-----P~gi 234 (322)
T 2fp8_A 168 IKYDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLVKIPN-----PGNI 234 (322)
T ss_dssp EEEETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEEECSS-----EEEE
T ss_pred EEEeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEEeCCC-----CCCe
Confidence 9999987765433210 0111233443 33 57877432 246889988753 3333222211 2333
Q ss_pred EE--CCEEEEEecC----------cceEEEEECCCCCeeeccCC-----CCCCceEEEcCeEEEEeC--cEEEEecCC
Q 019186 206 VI--GGKVHVLHKG----------LSTVQVLDHMGLGWTVEDYG-----WLQGPMAIVHDSVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 206 ~~--~~~iyv~gG~----------~~~i~~yd~~~~~W~~~~~~-----~~~~~~~~~~~~l~~~~~--~~i~~~d~~ 264 (345)
.+ +|.||+.... ...+.+||+....-..+... .....++..+++||+.+. ..|..|+++
T Consensus 235 ~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 235 KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred EECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 43 4679988532 35688999865544433221 113444556888888864 677777654
No 206
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.73 E-value=1.4 Score=38.91 Aligned_cols=98 Identities=14% Similarity=0.050 Sum_probs=54.1
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeeccC
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY 236 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~ 236 (345)
+++.++.|+.++ .+.+||.++.+-... +... ......+.. ++..++.|+....+..+|..+++....-.
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~--~~~h-~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMI--LQGH-EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEE--EccC-CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 567777776543 489999988754322 1111 111122222 55566666677889999998876533211
Q ss_pred CCC-CCceEEE--cCeEEEEeC--cEEEEecCCc
Q 019186 237 GWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 237 ~~~-~~~~~~~--~~~l~~~~~--~~i~~~d~~~ 265 (345)
... ...++.. ++.+++.++ +.+..+|..+
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~ 238 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 238 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 111 1112221 566666665 6777888765
No 207
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.62 E-value=2 Score=41.14 Aligned_cols=96 Identities=7% Similarity=-0.054 Sum_probs=49.6
Q ss_pred eEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeeccCCC
Q 019186 161 KIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGW 238 (345)
Q Consensus 161 ~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~ 238 (345)
..++.|+.++ .+.+||..+.+-... +... ......+.. ++++++.|+....+..+|..+.+-...-...
T Consensus 532 ~~l~s~s~d~------~v~vwd~~~~~~~~~--~~~h-~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~ 602 (694)
T 3dm0_A 532 PTIVSASWDK------TVKVWNLSNCKLRST--LAGH-TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN 602 (694)
T ss_dssp CEEEEEETTS------CEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS
T ss_pred ceEEEEeCCC------eEEEEECCCCcEEEE--EcCC-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC
Confidence 3455555442 488999887654321 1111 112222222 6677777777778899998877532211111
Q ss_pred C-CCceEE-EcCeEEEEeC-cEEEEecCCc
Q 019186 239 L-QGPMAI-VHDSVYLMSH-GLIIKQHRDV 265 (345)
Q Consensus 239 ~-~~~~~~-~~~~l~~~~~-~~i~~~d~~~ 265 (345)
. ...++. .++.+++.+. ..+..+|.++
T Consensus 603 ~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAATEHGIKIWDLES 632 (694)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred CcEEEEEEcCCCcEEEEEcCCCEEEEECCC
Confidence 1 111222 2444444433 6677777766
No 208
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.58 E-value=3.1 Score=35.57 Aligned_cols=181 Identities=15% Similarity=0.051 Sum_probs=95.7
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCC--ceEeCCCCC-----ccCC
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKD--VWVPIPDLH-----RTHN 199 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~-----~~~~ 199 (345)
..+.++|+.+++............-.++++- ++.+|+.... ...+..||+... .-..+.... ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 142 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHF 142 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCcccc
Confidence 4699999987764322110111112333433 6788887643 246899998765 222222110 1112
Q ss_pred CceeEEEE---CCEEEEEec-CcceEEEEECCCCCeeeccCC---------C--CCCceEEE-c-CeEEEEeC--cEEEE
Q 019186 200 SACTGVVI---GGKVHVLHK-GLSTVQVLDHMGLGWTVEDYG---------W--LQGPMAIV-H-DSVYLMSH--GLIIK 260 (345)
Q Consensus 200 ~~~~~~~~---~~~iyv~gG-~~~~i~~yd~~~~~W~~~~~~---------~--~~~~~~~~-~-~~l~~~~~--~~i~~ 260 (345)
.....+.+ ++.||+..+ ....|.+||.....-..+... . .+..+++- + +.||+.+. ..|..
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~ 222 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQC 222 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEE
Confidence 23333433 578999985 578899999654433333210 0 12334443 4 89999986 78999
Q ss_pred ecCCc--eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 261 QHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 261 ~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
|++++ ....-..+. ......+++...+.+|...|...... ..-..+.+||+.++
T Consensus 223 ~~~~~G~~~~~~~~~~-~~~~~~~~~~~pg~~~~~~g~~~v~~-----~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 223 FKTDTKEFVREIKHAS-FGRNVFAISYIPGFLFAVNGKPYFGD-----QEPVQGFVMNFSSG 278 (329)
T ss_dssp EETTTCCEEEEECCTT-TTTCEEEEEEETTEEEEEECCCCTTC-----SCCCCEEEEETTTC
T ss_pred EECCCCcEEEEEeccc-cCCCcceeeecCCEEEEeCCCEEecc-----CCCcEEEEEEcCCC
Confidence 99874 222111111 11122234434466777766432211 12347888888776
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.55 E-value=2.8 Score=35.46 Aligned_cols=183 Identities=8% Similarity=-0.124 Sum_probs=95.4
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.||+.+ .....++.|++ +++.+.+.... ..-.+++.. ++++|+.... ...+.+|
T Consensus 56 g~~l~~~d-~~~~~i~~~~~-~g~~~~~~~~~-----~~~~gl~~d~dG~l~v~~~~----------------~~~v~~~ 112 (305)
T 3dr2_A 56 QRTLVWSD-LVGRRVLGWRE-DGTVDVLLDAT-----AFTNGNAVDAQQRLVHCEHG----------------RRAITRS 112 (305)
T ss_dssp GTEEEEEE-TTTTEEEEEET-TSCEEEEEESC-----SCEEEEEECTTSCEEEEETT----------------TTEEEEE
T ss_pred CCEEEEEE-CCCCEEEEEeC-CCCEEEEeCCC-----CccceeeECCCCCEEEEECC----------------CCEEEEE
Confidence 34455554 34567888888 45444432211 112233333 6778877431 2468888
Q ss_pred eCCCCCcccCCCCCCC-c--eeeeeeE-eCCeEEEE----cCcCC-------CCCCCceEEEEeCCCCceEeCCCCCccC
Q 019186 134 DPVTRQWSPRASMLVP-R--AMFACCA-LKEKIVVA----GGFTS-------CRKSISQAEMYDPEKDVWVPIPDLHRTH 198 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~-r--~~~~~~~-~~~~iyv~----gG~~~-------~~~~~~~v~~yd~~~~~W~~~~~~~~~~ 198 (345)
++. ++.+.+...... + .-..+++ -++.+|+. |-... .......++.||+++.+.+.+. ..
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~- 187 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DL- 187 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EE-
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cC-
Confidence 885 555444321111 1 1112222 27888885 32110 0112357999999888877653 11
Q ss_pred CCceeEEE-ECC-EEEEEecC-----cceEEEEECCCCCeee---ccCC-C-CCCceEE-EcCeEEEEeCcEEEEecCCc
Q 019186 199 NSACTGVV-IGG-KVHVLHKG-----LSTVQVLDHMGLGWTV---EDYG-W-LQGPMAI-VHDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 199 ~~~~~~~~-~~~-~iyv~gG~-----~~~i~~yd~~~~~W~~---~~~~-~-~~~~~~~-~~~~l~~~~~~~i~~~d~~~ 265 (345)
....+.+. -++ .||+.... ...+++||...+.... .... . ....+++ .+|+||+.....++.|+++.
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~~g 267 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDSDG 267 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECTTS
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECCCC
Confidence 11122222 244 58887632 2689999987553211 1110 0 1223333 46788888877899999865
No 210
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.53 E-value=5.4 Score=38.10 Aligned_cols=150 Identities=8% Similarity=-0.064 Sum_probs=76.6
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCC-CcccC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR-QWSPR 143 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~-~W~~~ 143 (345)
...++++|..+++-..+...... ...-..++.. +++.++++..+... ....++++|+.++ ..+.+
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~-----------~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPK--EKFLTNLSWSPDENILYVAEVNRAQ-----------NECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCT--TCEEEEEEECTTSSEEEEEEECTTS-----------CEEEEEEEETTTCCEEEEE
T ss_pred eeEEEEEECCCCceEeeccCCCC--ceeEeeEEEECCCCEEEEEEeCCCC-----------CeeEEEEEECCCCceeeEE
Confidence 35788999998876655432111 0111223332 55544443322111 2457899999887 55443
Q ss_pred CCCCCCce---eeeeeE-e--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--C-CEEEEE
Q 019186 144 ASMLVPRA---MFACCA-L--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G-GKVHVL 214 (345)
Q Consensus 144 ~~~~~~r~---~~~~~~-~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~-~~iyv~ 214 (345)
........ ...++. - ++++++.+..++ ...++.+|........+..-... ....... + +.||+.
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~~---v~~~~~~spdg~~l~~~ 373 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEWE---VTNFAGFDPKGTRLYFE 373 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSSC---EEEEEEECTTSSEEEEE
T ss_pred EEccCCCeECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCeE---EEeeeEEcCCCCEEEEE
Confidence 21111100 011222 2 677655554332 45688888766666666332111 1121222 3 457666
Q ss_pred ecC----cceEEEEECCCCCeeecc
Q 019186 215 HKG----LSTVQVLDHMGLGWTVED 235 (345)
Q Consensus 215 gG~----~~~i~~yd~~~~~W~~~~ 235 (345)
+.. ...++.+|..+++.+.+.
T Consensus 374 ~~~~~~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 374 STEASPLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp ESSSCTTCBEEEEEETTCCCCEESC
T ss_pred ecCCCCceEEEEEEEcCCCCceecc
Confidence 542 247888898887766654
No 211
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.49 E-value=3.5 Score=36.26 Aligned_cols=185 Identities=12% Similarity=0.019 Sum_probs=90.3
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEe-----CCCCCccccccceeEEEEEC-C-EEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWIT-----LPVLPSKIRHLAHFGVVSTA-G-KLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~-----~~~~~~~~~~~~~~~~~~~~-~-~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
+.+++.|+. ...+.+||..++.... +..+... ...-.+++... + .+++.|+. ..
T Consensus 94 ~~~l~s~s~-dg~v~vw~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~~l~s~~~----------------dg 154 (402)
T 2aq5_A 94 DNVIASGSE-DCTVMVWEIPDGGLVLPLREPVITLEGH--TKRVGIVAWHPTAQNVLLSAGC----------------DN 154 (402)
T ss_dssp TTEEEEEET-TSEEEEEECCTTCCSSCBCSCSEEEECC--SSCEEEEEECSSBTTEEEEEET----------------TS
T ss_pred CCEEEEEeC-CCeEEEEEccCCCCccccCCceEEecCC--CCeEEEEEECcCCCCEEEEEcC----------------CC
Confidence 334444432 3578899988774321 1111110 01122344433 3 46777664 24
Q ss_pred ceEEEeCCCCCcccCCC-CCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC-CCCccCCCceeEE
Q 019186 129 EVWSYDPVTRQWSPRAS-MLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP-DLHRTHNSACTGV 205 (345)
Q Consensus 129 ~~~~yd~~t~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~-~~~~~~~~~~~~~ 205 (345)
.+.+||..+++....-. ......-.+++.. ++..++.|+.+ ..+.+||+.+.+-...- .............
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 68899998776432211 1111112223322 56666666543 35999999887643221 1111101222223
Q ss_pred EECCEEEEEe---cCcceEEEEECCCCCe----eeccCCCCCCceEE-EcC-eEEEEeC--cEEEEecCCc
Q 019186 206 VIGGKVHVLH---KGLSTVQVLDHMGLGW----TVEDYGWLQGPMAI-VHD-SVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 206 ~~~~~iyv~g---G~~~~i~~yd~~~~~W----~~~~~~~~~~~~~~-~~~-~l~~~~~--~~i~~~d~~~ 265 (345)
.-++.++++| +....+..||..+..- ...........++. .++ .+++.+. +.+..||..+
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 3477887777 5678899999876542 11111111112222 233 4555564 6677776654
No 212
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.46 E-value=6.3 Score=38.65 Aligned_cols=142 Identities=11% Similarity=-0.029 Sum_probs=86.2
Q ss_pred EEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC--CCCCCceeeeeeE--eCCeEEEEcCcC
Q 019186 96 GVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA--SMLVPRAMFACCA--LKEKIVVAGGFT 169 (345)
Q Consensus 96 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~gG~~ 169 (345)
++++. ++.||+.-.. ...++++++....-+.+. .+..+ .++++ .++.||+.--..
T Consensus 475 GLAvD~~~~~LY~tD~~----------------~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g~ 535 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSV----------------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT 535 (791)
T ss_dssp EEEEETTTTEEEEEETT----------------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS
T ss_pred eeeeeecCCcEEEEecC----------------CCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCCC
Confidence 34443 6789998642 457899998765543332 22222 24444 368999885211
Q ss_pred CCCCCCceEEEEeCCCCceEeCCCCCccCCCce-eEEEE--CCEEEEEecCcceEEEEECCCCCeeec-cC---CCCCCc
Q 019186 170 SCRKSISQAEMYDPEKDVWVPIPDLHRTHNSAC-TGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVE-DY---GWLQGP 242 (345)
Q Consensus 170 ~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~-~~---~~~~~~ 242 (345)
...|+++++....-+.+.. .. .... ++++- +++||+.-.....|+++|+....-..+ .. .+.+..
T Consensus 536 -----~~~I~~~~~dG~~~~~lv~--~~-l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~g 607 (791)
T 3m0c_C 536 -----PAKIKKGGLNGVDIYSLVT--EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 607 (791)
T ss_dssp -----SCEEEEEETTSCCEEEEEC--SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEE
T ss_pred -----CCeEEEEecCCCceEEEEe--CC-CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCE
Confidence 2568999887654333321 11 1222 33333 689999977678899999875443333 22 223567
Q ss_pred eEEEcCeEEEEeC--cEEEEecCC
Q 019186 243 MAIVHDSVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 243 ~~~~~~~l~~~~~--~~i~~~d~~ 264 (345)
+++.++.||+.+. ..|+.++..
T Consensus 608 lav~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 608 LAVFEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp EEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCEEEEEECCCCEEEEEeCC
Confidence 7888999999987 677777643
No 213
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.40 E-value=0.36 Score=42.41 Aligned_cols=98 Identities=6% Similarity=-0.038 Sum_probs=49.9
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE----CCEEEEEecCcceEEEEECCCCCeee-
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI----GGKVHVLHKGLSTVQVLDHMGLGWTV- 233 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~----~~~iyv~gG~~~~i~~yd~~~~~W~~- 233 (345)
++.+++.++.+ ..+.+||..+.+-...-..... ....... ++.+++.|+....+..||+.+.+-..
T Consensus 111 ~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 111 DTGMFTSSSFD------KTLKVWDTNTLQTADVFNFEET---VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI 181 (408)
T ss_dssp CTTCEEEEETT------SEEEEEETTTTEEEEEEECSSC---EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE
T ss_pred CCcEEEEEeCC------CeEEEeeCCCCccceeccCCCc---eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee
Confidence 44566666543 3589999888764433222222 1111111 34466677677789999987664322
Q ss_pred ccCCCCC-CceEEE-cCe-EEEEeC--cEEEEecCCc
Q 019186 234 EDYGWLQ-GPMAIV-HDS-VYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 234 ~~~~~~~-~~~~~~-~~~-l~~~~~--~~i~~~d~~~ 265 (345)
+...... ..++.. ++. +++.++ +.+..||...
T Consensus 182 ~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 182 LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 2111111 111211 333 454444 6777777654
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.39 E-value=4 Score=36.41 Aligned_cols=156 Identities=8% Similarity=-0.036 Sum_probs=82.5
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCE-EeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLW-ITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVW 131 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~ 131 (345)
++.||+........++.+|+.++.- ..+........ ..-+++++. ++.||+... ...++
T Consensus 182 g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~-~~p~~iav~p~~g~lyv~d~-----------------~~~I~ 243 (409)
T 3hrp_A 182 KQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFS-GKIGAVALDETEEWLYFVDS-----------------NKNFG 243 (409)
T ss_dssp SSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSC-SCCCBCEECTTSSEEEEECT-----------------TCEEE
T ss_pred CCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhc-CCcEEEEEeCCCCeEEEEEC-----------------CCcEE
Confidence 4566666543333888999876532 23311111000 112234444 578999432 23699
Q ss_pred EEeCCCCCcccCC---CCCCCcee-e-eeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCC--Cc------
Q 019186 132 SYDPVTRQWSPRA---SMLVPRAM-F-ACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDL--HR------ 196 (345)
Q Consensus 132 ~yd~~t~~W~~~~---~~~~~r~~-~-~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~--~~------ 196 (345)
+||+.++....+. ........ . .+++. ++.+|+.... .+.+.+||+....-...... +.
T Consensus 244 ~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~ 317 (409)
T 3hrp_A 244 RFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------LSSVYKITPDGECEWFCGSATQKTVQDGLR 317 (409)
T ss_dssp EEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------TTEEEEECTTCCEEEEEECTTCCSCBCEEG
T ss_pred EEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------CCEEEEEecCCCEEEEEeCCCCCCcCCCcc
Confidence 9999877644331 11111122 1 44444 5889988532 35688998775422221111 00
Q ss_pred --cCCCceeEEEE--CCEEEEEec-CcceEEEEECCCCCeeec
Q 019186 197 --THNSACTGVVI--GGKVHVLHK-GLSTVQVLDHMGLGWTVE 234 (345)
Q Consensus 197 --~~~~~~~~~~~--~~~iyv~gG-~~~~i~~yd~~~~~W~~~ 234 (345)
........+.+ ++.||+... ....|.++|+.++.-..+
T Consensus 318 ~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 318 EEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp GGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEE
T ss_pred cccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEE
Confidence 00122334444 567999986 678899999766655443
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.37 E-value=0.077 Score=47.03 Aligned_cols=139 Identities=6% Similarity=-0.020 Sum_probs=61.8
Q ss_pred eEeCCeEEEEcCcCCCCCCCceEEEEeCCCCc--eEeCCCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCC--Ce
Q 019186 156 CALKEKIVVAGGFTSCRKSISQAEMYDPEKDV--WVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGL--GW 231 (345)
Q Consensus 156 ~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~--~W 231 (345)
++.++.+|+.+. + ..+..+|.++.+ |+.-. .. . ....+..++.+|+.+.....++++|.+++ .|
T Consensus 6 ~v~~~~v~~gs~-d------g~v~a~d~~tG~~~W~~~~---~~-~-~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w 73 (369)
T 2hz6_A 6 TLPETLLFVSTL-D------GSLHAVSKRTGSIKWTLKE---DP-V-LQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT 73 (369)
T ss_dssp --CTTEEEEEET-T------SEEEEEETTTCCEEEEEEC---CC-S-CCCC-----CCEEECTTTCCEEEC-----CCSE
T ss_pred eeeCCEEEEEcC-C------CEEEEEECCCCCEEEEecC---CC-c-eecceEcCCCEEEEeCCCCEEEEEECCCCceee
Confidence 445677776543 2 358999988764 87532 12 1 12224456778887656678999998654 46
Q ss_pred eeccCCCC--CCceEE-EcCeEEEEeC-cEEEEecCCc----eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCc
Q 019186 232 TVEDYGWL--QGPMAI-VHDSVYLMSH-GLIIKQHRDV----RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWN 303 (345)
Q Consensus 232 ~~~~~~~~--~~~~~~-~~~~l~~~~~-~~i~~~d~~~----W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~ 303 (345)
........ ..+.+. .++.+|+-+. +.++.+|.++ |+.-.... .+ .+..++.|| +|+.++
T Consensus 74 ~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~----~~p~~~~v~-~~~~dg----- 140 (369)
T 2hz6_A 74 KLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DS----LSPSTSLLY-LGRTEY----- 140 (369)
T ss_dssp ECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC-----------------------------EE-EEEEEE-----
T ss_pred eeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---cc----ccccCCEEE-EEecCC-----
Confidence 53211110 122222 4666665443 6899999876 65432211 11 111334444 444332
Q ss_pred ccccccCceeeeccCCCCCceeE
Q 019186 304 WDIKPMSDVDVLTVGAERPTWRQ 326 (345)
Q Consensus 304 ~~~~~~~~v~~yd~~~~~~~W~~ 326 (345)
.+..||+.+++..|+.
T Consensus 141 -------~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 141 -------TITMYDTKTRELRWNA 156 (369)
T ss_dssp -------EEECCCSSSSSCCCEE
T ss_pred -------EEEEEECCCCCEEEeE
Confidence 5788898877667874
No 216
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.31 E-value=4 Score=36.01 Aligned_cols=213 Identities=12% Similarity=0.078 Sum_probs=113.8
Q ss_pred CcEEEEEecCCCCeEEEEeCCC--CCEEeCCCCCccccccceeEEEEE---CCEEEEEcCCCCCCCCCCCCCCCCcCcCc
Q 019186 55 ENLLCVCAFDPENLWQLYDPLR--DLWITLPVLPSKIRHLAHFGVVST---AGKLFVLGGGSDAVDPLTGDQDGSFATNE 129 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~~ 129 (345)
.+.||+... .-++.++... .+|+...+.... ..-++++.. ++.||+.+.... ....
T Consensus 22 ~g~l~vgt~---~Gl~~~~~~~~g~~W~~~~~~~~~---~~v~~i~~dp~~~~~l~~g~~~g~-------------~g~g 82 (394)
T 3b7f_A 22 PVMLLVATI---KGAWFLASDPARRTWELRGPVFLG---HTIHHIVQDPREPERMLMAARTGH-------------LGPT 82 (394)
T ss_dssp CCEEEEEET---TEEEEEEECTTSCSEEEEEEESTT---SEEEEEEECSSSTTCEEEEEEC---------------CCEE
T ss_pred CCEEEEEec---CceEEEECCCCCCCceECCccCCC---CceEEEEECCCCCCeEEEEecCCC-------------CCcc
Confidence 456776552 3477787655 689876421111 233455554 467888763200 1125
Q ss_pred eEEEeCCCCCcccCCCC---CCC--c-------eeeeeeEe----CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCC
Q 019186 130 VWSYDPVTRQWSPRASM---LVP--R-------AMFACCAL----KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPD 193 (345)
Q Consensus 130 ~~~yd~~t~~W~~~~~~---~~~--r-------~~~~~~~~----~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~ 193 (345)
+++.+-...+|+++... +.. + .-.++++. .+.+|+.+. ...++..+....+|+.+..
T Consensus 83 l~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~ 155 (394)
T 3b7f_A 83 VFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAG 155 (394)
T ss_dssp EEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHH
T ss_pred EEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcC
Confidence 78887778899987532 111 1 11223332 467777542 1237777777889998743
Q ss_pred C---Cc-------------cCCCceeEEEE---CCEEEEEecCcceEEEEECCCCCeeeccCCCC--------------C
Q 019186 194 L---HR-------------THNSACTGVVI---GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL--------------Q 240 (345)
Q Consensus 194 ~---~~-------------~~~~~~~~~~~---~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~--------------~ 240 (345)
. |. .....++++.. .+.||+... ...+++.+-...+|+.+..... .
T Consensus 156 ~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~ 234 (394)
T 3b7f_A 156 FNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDP 234 (394)
T ss_dssp HHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCE
T ss_pred ccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCCCCceECCCCccccccCCCccccCcce
Confidence 2 11 00111222222 256887642 3457777777789998753211 1
Q ss_pred CceEEE-c--CeEEEEeCcEEEEecCCc--eEEecc-chhhcccceeEEEEE---CCeEEEEc
Q 019186 241 GPMAIV-H--DSVYLMSHGLIIKQHRDV--RKVVAS-ASEFRRRIGFAMIGM---GDDIYVIG 294 (345)
Q Consensus 241 ~~~~~~-~--~~l~~~~~~~i~~~d~~~--W~~~~~-~p~~~~r~~~~~~~~---~~~l~i~G 294 (345)
..++.. + +.||+.....++..+... |+++.. +|.......+.++.. .+.||+..
T Consensus 235 ~~i~~~~~~~~~l~vg~~~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 235 HCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EEEEECSSSTTEEEEEETTEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred eEEEECCCCCCEEEEEcCCeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 122222 1 678887767788776433 999864 442111233344432 45677753
No 217
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.23 E-value=1.6 Score=42.14 Aligned_cols=147 Identities=10% Similarity=-0.057 Sum_probs=84.3
Q ss_pred ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC--CCCCceeeeeeE--eCCeEEEEcCcCCCCCCC
Q 019186 100 TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS--MLVPRAMFACCA--LKEKIVVAGGFTSCRKSI 175 (345)
Q Consensus 100 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~ 175 (345)
.++.||+.-.. ...++++++....-+.+.. +..+ .++++ .++.||+..... .
T Consensus 463 ~~g~LY~tD~~----------------~~~I~v~d~dg~~~~~l~~~~~~~P---~giavDp~~g~ly~td~~~-----~ 518 (699)
T 1n7d_A 463 IHSNIYWTDSV----------------LGTVSVADTKGVKRKTLFREQGSKP---RAIVVDPVHGFMYWTDWGT-----P 518 (699)
T ss_dssp SSSBCEECCTT----------------TSCEEEEBSSSCCEEEECCCSSCCC---CCEECCSSSSCCEECCCSS-----S
T ss_pred eCCcEEEEecc----------------CCeEEEEecCCCceEEEEeCCCCCc---ceEEEccCCCcEEEcccCC-----C
Confidence 36788887432 3468899987654333322 2222 23333 367888764211 2
Q ss_pred ceEEEEeCCCCceEeCCCCCccCCCceeEEE--ECCEEEEEecCcceEEEEECCCCCeeeccC----CCCCCceEEEcCe
Q 019186 176 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGWTVEDY----GWLQGPMAIVHDS 249 (345)
Q Consensus 176 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~----~~~~~~~~~~~~~ 249 (345)
..++++++....-+.+..... ....++++ .+++||+.-.....|+++|+....-+.+.. ...+..+++.++.
T Consensus 519 ~~I~~~~~dG~~~~~l~~~~l--~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~ 596 (699)
T 1n7d_A 519 AKIKKGGLNGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK 596 (699)
T ss_dssp CCEEBCCSSSCCCCEESCSSC--SSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTE
T ss_pred CeEEEEeCCCCCeeEEEeCCC--CCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCE
Confidence 457887776443222211111 11122333 257899998767889999987543333322 2236677888889
Q ss_pred EEEEeC--cEEEEecCCceEEeccc
Q 019186 250 VYLMSH--GLIIKQHRDVRKVVASA 272 (345)
Q Consensus 250 l~~~~~--~~i~~~d~~~W~~~~~~ 272 (345)
||+... ..|..+++.+.+.+..+
T Consensus 597 lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 597 VFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEEECSTTTCEEEEETTTEEEEECC
T ss_pred EEEEeCCCCeEEEEEccCCCceEEe
Confidence 999886 78888887664444333
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.21 E-value=4.4 Score=36.14 Aligned_cols=145 Identities=10% Similarity=-0.002 Sum_probs=82.1
Q ss_pred EEEE-ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCceeeeeeE--eCCeEEEEcCcCCCC
Q 019186 96 GVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPRAMFACCA--LKEKIVVAGGFTSCR 172 (345)
Q Consensus 96 ~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~ 172 (345)
.+++ -++.||+.... ...+.++|+.+++-..+.... ...+ ++. -++.+|+.....
T Consensus 135 ~la~d~~g~lyv~d~~----------------~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~--- 192 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD----------------DPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEG--- 192 (409)
T ss_dssp EEEECSTTEEEEEETT----------------TTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSST---
T ss_pred EEEEeCCCCEEEEecC----------------CCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCC---
Confidence 3444 36789988652 347899999887654442221 1112 222 245677765422
Q ss_pred CCCceEEEEeCCCCc-eEeCCCCCc-cCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeec----cCCCC--C-C
Q 019186 173 KSISQAEMYDPEKDV-WVPIPDLHR-THNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVE----DYGWL--Q-G 241 (345)
Q Consensus 173 ~~~~~v~~yd~~~~~-W~~~~~~~~-~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~----~~~~~--~-~ 241 (345)
...++.+|+.+.. ...+..+.. .......++.. ++.||+.. ....+++||+.+.....+ ..... . .
T Consensus 193 --~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d-~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 193 --THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD-SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp --TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC-TTCEEEEEETTTCCEEEEEECCCCSCCCCSSC
T ss_pred --CceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE-CCCcEEEEECCCCCEEEEecccccCCCCCCcc
Confidence 1268999887543 223311111 10111223332 68899965 356799999988765544 11111 2 2
Q ss_pred -ceEEE--cCeEEEEeC--cEEEEecCCc
Q 019186 242 -PMAIV--HDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 242 -~~~~~--~~~l~~~~~--~~i~~~d~~~ 265 (345)
.++.. ++.||+.+. ..|+.++.+.
T Consensus 270 ~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 45554 589999986 7899998775
No 219
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.12 E-value=6.2 Score=37.82 Aligned_cols=187 Identities=11% Similarity=-0.066 Sum_probs=94.8
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcc--c
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWS--P 142 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~--~ 142 (345)
...++++|..+++......++. ....+++.. +|+.++++....... +..........+++++..+.+-. .
T Consensus 146 ~~~i~v~dl~tg~~~~~~~~~~----~~~~~~~wspDg~~l~~~~~d~~~~---~~~~~~~~~~~v~~~~l~t~~~~~~l 218 (695)
T 2bkl_A 146 EAVLHVIDVDSGEWSKVDVIEG----GKYATPKWTPDSKGFYYEWLPTDPS---IKVDERPGYTTIRYHTLGTEPSKDTV 218 (695)
T ss_dssp CCEEEEEETTTCCBCSSCCBSC----CTTCCCEECTTSSEEEEEECCCCTT---SCGGGGGGGCEEEEEETTSCGGGCEE
T ss_pred eEEEEEEECCCCCCcCCcccCc----ccccceEEecCCCEEEEEEecCCCC---CccccCCCCCEEEEEECCCCchhceE
Confidence 4688999999987541111111 111233333 666666655432100 00001113456999999887643 1
Q ss_pred CCCCCC-CceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEec---C
Q 019186 143 RASMLV-PRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK---G 217 (345)
Q Consensus 143 ~~~~~~-~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG---~ 217 (345)
+...+. .......... +++..++...... ...+++.+|..+..++.+...... . ...+..++.+|+... .
T Consensus 219 v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~~-~--~~~~~~~g~l~~~s~~~~~ 293 (695)
T 2bkl_A 219 VHERTGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKGVGA-K--YEVHAWKDRFYVLTDEGAP 293 (695)
T ss_dssp EECCCCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEECSSC-C--EEEEEETTEEEEEECTTCT
T ss_pred EEecCCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecCCCc-e--EEEEecCCcEEEEECCCCC
Confidence 212111 1122222222 5554444433321 245778888777777766433222 2 222335666666653 3
Q ss_pred cceEEEEECCCCC---eeeccCCC-C--CCceEEEcCeEEEEeC----cEEEEecCC
Q 019186 218 LSTVQVLDHMGLG---WTVEDYGW-L--QGPMAIVHDSVYLMSH----GLIIKQHRD 264 (345)
Q Consensus 218 ~~~i~~yd~~~~~---W~~~~~~~-~--~~~~~~~~~~l~~~~~----~~i~~~d~~ 264 (345)
...++.+|+.+.. |+.+.... . ...++..++.+++... ..++.++.+
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence 5779999987654 87764332 1 1223344777776653 567777753
No 220
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.02 E-value=2.6 Score=37.69 Aligned_cols=97 Identities=5% Similarity=-0.119 Sum_probs=49.5
Q ss_pred EEEEcCcCCCCCCCceEEEEeCCCC---ceEe--CCCCCccCCCceeEEEE---CCEEEEEecCcceEEEEECCCCC---
Q 019186 162 IVVAGGFTSCRKSISQAEMYDPEKD---VWVP--IPDLHRTHNSACTGVVI---GGKVHVLHKGLSTVQVLDHMGLG--- 230 (345)
Q Consensus 162 iyv~gG~~~~~~~~~~v~~yd~~~~---~W~~--~~~~~~~~~~~~~~~~~---~~~iyv~gG~~~~i~~yd~~~~~--- 230 (345)
+++.|+.++ .+.+||..+. .+.. ...+... ......+.. ++.+++.++....+..||+++..
T Consensus 196 ~l~s~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 196 YLLSASDDH------TICLWDINATPKEHRVIDAKNIFTGH-TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK 268 (430)
T ss_dssp EEEEECTTS------CEEEEETTSCCBGGGEEECSEEECCC-SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS
T ss_pred eEEEEeCCC------eEEEEeCCCCCCCCceeccceeecCC-CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc
Confidence 666666543 3889998873 2221 1111111 111222222 56677777778889999998652
Q ss_pred -eeeccCCCCCCceEEE--cC-eEEEEeC--cEEEEecCCc
Q 019186 231 -WTVEDYGWLQGPMAIV--HD-SVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 231 -W~~~~~~~~~~~~~~~--~~-~l~~~~~--~~i~~~d~~~ 265 (345)
-..+............ ++ .+++.++ +.+..||...
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 1112111111111112 23 3666655 7888888765
No 221
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.89 E-value=2.7 Score=38.95 Aligned_cols=209 Identities=6% Similarity=-0.002 Sum_probs=95.0
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS 145 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 145 (345)
..+.++|.....-..+.... ..-.+++.. +++.++.|+. ...+.+||...+.-..+..
T Consensus 325 ~~i~~w~~~~~~~~~~~~~~-----~~v~~~~~s~~g~~l~~~~~----------------dg~v~~~~~~~~~~~~~~~ 383 (577)
T 2ymu_A 325 KTVKLWNRNGQHLQTLTGHS-----SSVWGVAFSPDGQTIASASD----------------DKTVKLWNRNGQLLQTLTG 383 (577)
T ss_dssp SCEEEEETTSCEEEEECCCS-----SCEEEEEECTTSSEEEEEET----------------TSEEEEEETTCCEEEEEEC
T ss_pred CeEEEEeCCCCeeEEEeCCC-----CCEEEEEECCCCCEEEEEeC----------------CCEEEEEcCCCCEEEEecC
Confidence 45667776655443332211 112233333 5666666654 2357778764332222211
Q ss_pred CCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE-EECCEEEEEecCcceEEE
Q 019186 146 MLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGGKVHVLHKGLSTVQV 223 (345)
Q Consensus 146 ~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~iyv~gG~~~~i~~ 223 (345)
... .-.+++.. +++.++.|+.+ ..+.+||.....-..+...... -.+++ .-+++.++.++....+..
T Consensus 384 ~~~--~v~~~~~s~dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~~~---v~~~~~s~d~~~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 384 HSS--SVRGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTGHSSS---VWGVAFSPDDQTIASASDDKTVKL 452 (577)
T ss_dssp CSS--CEEEEEECTTSSCEEEEETT------SEEEEECTTCCEEEEEECCSSC---EEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCC--CeEEEEECCCCCEEEEEeCC------CEEEEEeCCCCEEEEecCCCCC---eEEEEECCCCCEEEEEcCCCEEEE
Confidence 111 11122222 55666665543 3478888544333322211111 11122 225666677666677888
Q ss_pred EECCCCCeeeccCCCCC-CceEE-EcCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEEEECCeEEEEcceecC
Q 019186 224 LDHMGLGWTVEDYGWLQ-GPMAI-VHDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGP 299 (345)
Q Consensus 224 yd~~~~~W~~~~~~~~~-~~~~~-~~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~ 299 (345)
||.....-..+...... ..++. .++++++.++ ..+..+|... +.+..+.............-++++++.|+.++
T Consensus 453 w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~-~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg- 530 (577)
T 2ymu_A 453 WNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDK- 530 (577)
T ss_dssp EETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS-CEEEEEECCSSCEEEEEECTTSSCEEEEETTS-
T ss_pred EECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcC-
Confidence 98765544433222111 11111 2566655554 5677777543 22222211011222222223667777766332
Q ss_pred CCCcccccccCceeeeccCCC
Q 019186 300 DRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 300 ~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.|.+||....
T Consensus 531 -----------~v~lwd~~~~ 540 (577)
T 2ymu_A 531 -----------TVKLWNRNGQ 540 (577)
T ss_dssp -----------EEEEECTTSC
T ss_pred -----------EEEEEeCCCC
Confidence 4777886543
No 222
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.88 E-value=4.9 Score=35.76 Aligned_cols=144 Identities=10% Similarity=-0.022 Sum_probs=85.0
Q ss_pred EEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC--CCCCCceeeeeeE--eCCeEEEEcCcC
Q 019186 96 GVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA--SMLVPRAMFACCA--LKEKIVVAGGFT 169 (345)
Q Consensus 96 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~gG~~ 169 (345)
++++. ++.||+.-.. ...++++++....-+.+. .+..+ .++++ .++.||+.-...
T Consensus 163 glavD~~~~~lY~~d~~----------------~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSV----------------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp EEEEETTTTEEEEEETT----------------TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECSS
T ss_pred cEEEEecCCceEEEECC----------------CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCCC
Confidence 44553 7889998643 347888988766543332 12222 23444 368899875211
Q ss_pred CCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeec-cC---CCCCCce
Q 019186 170 SCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVE-DY---GWLQGPM 243 (345)
Q Consensus 170 ~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~-~~---~~~~~~~ 243 (345)
...++++++....=+.+.. .......+++.- +++||+.......|+.+|+....-..+ .. ...+..+
T Consensus 224 -----~~~I~~~~~dG~~~~~~~~--~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl 296 (400)
T 3p5b_L 224 -----PAKIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSL 296 (400)
T ss_dssp -----SCCEEEEETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEE
T ss_pred -----CCEEEEEeCCCCccEEEEE--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEE
Confidence 2468899887543222211 110112233333 689999976678999999875443333 21 2235677
Q ss_pred EEEcCeEEEEeC--cEEEEecCCc
Q 019186 244 AIVHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 244 ~~~~~~l~~~~~--~~i~~~d~~~ 265 (345)
++.++.||..+. ..|..+|+.+
T Consensus 297 ~v~~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 297 AVFEDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp EEETTEEEEEESSSCSEEEEESSS
T ss_pred EEeCCEEEEecCCCCeEEEEEcCC
Confidence 788999999986 6777777543
No 223
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=92.72 E-value=7.3 Score=37.40 Aligned_cols=190 Identities=12% Similarity=0.000 Sum_probs=95.2
Q ss_pred eEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCccc--CC
Q 019186 68 LWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSP--RA 144 (345)
Q Consensus 68 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~--~~ 144 (345)
.++++|..+++..... ... ....+++.. +++-++++..........+..........+++++..+++... +.
T Consensus 152 ~i~v~d~~tg~~~~~~-~~~----~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~ 226 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDV-LER----VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA 226 (710)
T ss_dssp EEEEEETTTTEEEEEE-EEE----ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEECCCCCCCccc-ccC----cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe
Confidence 8899999998776531 111 111234443 555444443322100000111111234569999998876432 11
Q ss_pred CCC-CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCC------C--ceEeCCCCCccCCCceeEEEECCEEEEE
Q 019186 145 SML-VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEK------D--VWVPIPDLHRTHNSACTGVVIGGKVHVL 214 (345)
Q Consensus 145 ~~~-~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~------~--~W~~~~~~~~~~~~~~~~~~~~~~iyv~ 214 (345)
..+ ........... +++..++...... .....++++|..+ . .++.+...... . .......++.+|+.
T Consensus 227 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~-~~~~s~dg~~l~~~ 303 (710)
T 2xdw_A 227 EFPDEPKWMGGAELSDDGRYVLLSIREGC-DPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-E-YDYVTNEGTVFTFK 303 (710)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEECSS-SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-C-EEEEEEETTEEEEE
T ss_pred ccCCCCeEEEEEEEcCCCCEEEEEEEccC-CCccEEEEEECcccccccCCccceEEeeCCCCc-E-EEEEeccCCEEEEE
Confidence 111 12222233322 5554444332211 1246789999876 3 56666443222 2 12223446778887
Q ss_pred ec---CcceEEEEECCCC---CeeeccCCCC---CCceEEE-cCeEEEEeC----cEEEEecCCc
Q 019186 215 HK---GLSTVQVLDHMGL---GWTVEDYGWL---QGPMAIV-HDSVYLMSH----GLIIKQHRDV 265 (345)
Q Consensus 215 gG---~~~~i~~yd~~~~---~W~~~~~~~~---~~~~~~~-~~~l~~~~~----~~i~~~d~~~ 265 (345)
+. ....++.+|+.+. .|+.+..... ...++.. ++.+++... ..++.++..+
T Consensus 304 s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~ 368 (710)
T 2xdw_A 304 TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT 368 (710)
T ss_dssp ECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred ECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC
Confidence 64 2457999998875 4877643322 1123344 666666543 4678888633
No 224
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.61 E-value=1 Score=38.42 Aligned_cols=140 Identities=9% Similarity=0.041 Sum_probs=68.6
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceE-eCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeecc
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWV-PIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVED 235 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~ 235 (345)
++..++.|+.+ ..+.+||.++.+-. .+.. . ......+.. ++.+++.|+.-..+..+|.+...-..+.
T Consensus 76 dg~~l~s~s~D------~~v~~wd~~~~~~~~~~~~---h-~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 76 DGAYALSASWD------KTLRLWDVATGETYQRFVG---H-KSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLL 145 (319)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEEC---C-SSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEEC
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCeeEEEcc---C-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 56666666654 35899999887532 2211 1 111222222 5667777777778888998765433332
Q ss_pred CCCCC-CceEEE-------cCeEEEEeC--cEEEEecCCceEEeccchhhcccceeEEEEECCeEEEEcceecCCCCccc
Q 019186 236 YGWLQ-GPMAIV-------HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWD 305 (345)
Q Consensus 236 ~~~~~-~~~~~~-------~~~l~~~~~--~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~ 305 (345)
..... ..+... ++.+++.++ +.+..+|.++.+....+.............-++++++.|+.++
T Consensus 146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg------- 218 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG------- 218 (319)
T ss_dssp CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC-------
T ss_pred ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC-------
Confidence 11110 011111 222333333 6777888776444332221111111112223667777776432
Q ss_pred ccccCceeeeccCCC
Q 019186 306 IKPMSDVDVLTVGAE 320 (345)
Q Consensus 306 ~~~~~~v~~yd~~~~ 320 (345)
.|.+||+.+.
T Consensus 219 -----~i~iwd~~~~ 228 (319)
T 3frx_A 219 -----EIMLWNLAAK 228 (319)
T ss_dssp -----EEEEEETTTT
T ss_pred -----eEEEEECCCC
Confidence 4566676554
No 225
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=92.54 E-value=4.4 Score=34.46 Aligned_cols=228 Identities=10% Similarity=-0.039 Sum_probs=116.8
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCc----------------cccccceeEEEEE--CCEEEEEcCCCCCCCCC
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPS----------------KIRHLAHFGVVST--AGKLFVLGGGSDAVDPL 117 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~----------------~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~ 117 (345)
..+|+- .....+..||+.+++++.+..... ... ..-++++.. ++.|||....
T Consensus 31 ~~l~v~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~p~gi~~~~~~g~l~v~d~~------- 100 (322)
T 2fp8_A 31 KGFYTS--VQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLC-GRTYDISYNLQNNQLYIVDCY------- 100 (322)
T ss_dssp SSEEEE--CTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHH-CCEEEEEEETTTTEEEEEETT-------
T ss_pred CEEEEE--cCCCeEEEECCCCCceEEEecccccccccccccccchhccccC-CCCceEEEcCCCCcEEEEECC-------
Confidence 336653 235678999998877765431110 000 112455555 5789998432
Q ss_pred CCCCCCCcCcCceEEEeCCCCCcccCCCCCCC---ceeeeeeEe--CCeEEEEcCcCCC-----------CCCCceEEEE
Q 019186 118 TGDQDGSFATNEVWSYDPVTRQWSPRASMLVP---RAMFACCAL--KEKIVVAGGFTSC-----------RKSISQAEMY 181 (345)
Q Consensus 118 ~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~---r~~~~~~~~--~~~iyv~gG~~~~-----------~~~~~~v~~y 181 (345)
..+.++|+.+++.+.+...... ..-..+++- ++.+|+.-..... ......+..|
T Consensus 101 ----------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 101 ----------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp ----------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred ----------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 2478899877655443221111 111223332 5788887432100 0123568999
Q ss_pred eCCCCceEeCCC-CCccCCCceeEEEE-CC-EEEEEecCcceEEEEECCCC---CeeeccCCCCCCceEE-EcCeEEEEe
Q 019186 182 DPEKDVWVPIPD-LHRTHNSACTGVVI-GG-KVHVLHKGLSTVQVLDHMGL---GWTVEDYGWLQGPMAI-VHDSVYLMS 254 (345)
Q Consensus 182 d~~~~~W~~~~~-~~~~~~~~~~~~~~-~~-~iyv~gG~~~~i~~yd~~~~---~W~~~~~~~~~~~~~~-~~~~l~~~~ 254 (345)
|+.+.+.+.+.. +.. ...++.. ++ .||+.......|.+|++... ..+.....+.+..+++ .+|.||+..
T Consensus 171 d~~~~~~~~~~~~~~~----p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 171 DPSTKETTLLLKELHV----PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSS 246 (322)
T ss_dssp ETTTTEEEEEEEEESC----CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTSCEEEEE
T ss_pred eCCCCEEEEeccCCcc----CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCCCEEEEe
Confidence 998877654321 111 1222322 33 58888544678999998753 3333221111122222 256888876
Q ss_pred C------------cEEEEecCCc--eEEeccchhhc-ccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCC
Q 019186 255 H------------GLIIKQHRDV--RKVVASASEFR-RRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 319 (345)
Q Consensus 255 ~------------~~i~~~d~~~--W~~~~~~p~~~-~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~ 319 (345)
. ..++.||++. -..+.. +... .....+++.-+++|||.+... +.|.+|++..
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~~~------------~~i~~~~~~~ 313 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEFGNILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTLFH------------GSVGILVYDK 313 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTTSCEEEEEEC-CTTTTTSCCCEEEEETTEEEEECSSC------------SEEEEEEC--
T ss_pred cCcccccccCCCccEEEEECCCCCEEEEEEC-CCCCccccceEEEEeCCEEEEeecCC------------CceEEEeccc
Confidence 3 4688999865 222321 2100 112233444688898864311 3677888765
Q ss_pred C
Q 019186 320 E 320 (345)
Q Consensus 320 ~ 320 (345)
+
T Consensus 314 ~ 314 (322)
T 2fp8_A 314 K 314 (322)
T ss_dssp -
T ss_pred c
Confidence 4
No 226
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.53 E-value=0.54 Score=40.19 Aligned_cols=99 Identities=13% Similarity=0.181 Sum_probs=52.1
Q ss_pred CceEEEeCCCCCcccCCCCCCCce-eeeeeEe---CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRA-MFACCAL---KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT 203 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~-~~~~~~~---~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 203 (345)
..+.+||..+++...+..+..... -.+++.. ++.+++.|+.++ .+.+||.++..|..+..+... .....
T Consensus 35 ~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~~h-~~~V~ 107 (316)
T 3bg1_A 35 RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR------KVIIWREENGTWEKSHEHAGH-DSSVN 107 (316)
T ss_dssp TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS------CEEEECCSSSCCCEEEEECCC-SSCCC
T ss_pred CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC------EEEEEECCCCcceEEEEccCC-CCceE
Confidence 467788876654322222221111 1222222 256666666543 488999988776544332222 11122
Q ss_pred EEEE--C--CEEEEEecCcceEEEEECCCC-Ceee
Q 019186 204 GVVI--G--GKVHVLHKGLSTVQVLDHMGL-GWTV 233 (345)
Q Consensus 204 ~~~~--~--~~iyv~gG~~~~i~~yd~~~~-~W~~ 233 (345)
.+.. + +.+++.|+....+..+|..+. .|..
T Consensus 108 ~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 108 SVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp EEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred EEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 2222 2 556777776777888888765 5643
No 227
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=92.45 E-value=0.04 Score=52.08 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=28.7
Q ss_pred cCCCCChHHHHHHhhccCC-CcchhhHHHhhHHHHHh
Q 019186 3 ELIEGLPDAVALRCLARVP-FFLHPKLELVSRSWRAA 38 (345)
Q Consensus 3 ~~~~~lp~~~~~~~l~~~p-~~~~~~~~~~~~~w~~~ 38 (345)
..|..||||++.+|+.++| .....+...||++|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 5678999999999999999 88999999999999977
No 228
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.26 E-value=8.3 Score=36.94 Aligned_cols=241 Identities=8% Similarity=-0.067 Sum_probs=119.6
Q ss_pred CcEEEEEecC---CCCeEEEEeCCCCCEEeCCCCCccc-ccc-ceeEEEE-ECCEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAFD---PENLWQLYDPLRDLWITLPVLPSKI-RHL-AHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg~---~~~~~~~yd~~~~~W~~~~~~~~~~-~~~-~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
++.+|..-.. ....++..+...++|+.+......- ... ...+.+. -+|+.+++....... ...
T Consensus 79 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~-----------~~~ 147 (695)
T 2bkl_A 79 NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA-----------DEA 147 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC-----------SCC
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC-----------ceE
Confidence 6666665432 2467788888888888775433210 001 1122222 266666554321111 245
Q ss_pred ceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCC-------CCCceEEEEeCCCCce--EeCCCCCccC
Q 019186 129 EVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCR-------KSISQAEMYDPEKDVW--VPIPDLHRTH 198 (345)
Q Consensus 129 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~-------~~~~~v~~yd~~~~~W--~~~~~~~~~~ 198 (345)
+++++|..+++......+..... ...+.. +++.+++....... .....++.++..+..- ..+...+...
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP 226 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT
T ss_pred EEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC
Confidence 89999999988652112221111 222322 56655554433210 1235688899887653 2222222210
Q ss_pred CCce-eEEEECCEEEEEec----CcceEEEEECCCCCeeeccCCCC-CCceEEEcCeEEEEeC-----cEEEEecCCc--
Q 019186 199 NSAC-TGVVIGGKVHVLHK----GLSTVQVLDHMGLGWTVEDYGWL-QGPMAIVHDSVYLMSH-----GLIIKQHRDV-- 265 (345)
Q Consensus 199 ~~~~-~~~~~~~~iyv~gG----~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~~~~~l~~~~~-----~~i~~~d~~~-- 265 (345)
.... ....-+++..++.. ....++.+|..+..++.+..... .......+|.+|+... ..++.+|.++
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 1111 12233555333332 23477777776777877654322 1122224666666654 6788888654
Q ss_pred ---eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCC
Q 019186 266 ---RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 319 (345)
Q Consensus 266 ---W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~ 319 (345)
|+.+-.-. ....-..+...++++++....++. ..++++|+..
T Consensus 307 ~~~~~~l~~~~--~~~~l~~~~~~~~~lv~~~~~dg~----------~~l~~~~~~g 351 (695)
T 2bkl_A 307 RASWKEIVPED--SSASLLSVSIVGGHLSLEYLKDAT----------SEVRVATLKG 351 (695)
T ss_dssp GGGCEEEECCC--SSCEEEEEEEETTEEEEEEEETTE----------EEEEEEETTC
T ss_pred ccCCeEEecCC--CCCeEEEEEEECCEEEEEEEECCE----------EEEEEEeCCC
Confidence 77664321 011112333447888777654433 2566666643
No 229
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.21 E-value=6.3 Score=36.34 Aligned_cols=127 Identities=6% Similarity=-0.027 Sum_probs=60.2
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE-
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV- 205 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~- 205 (345)
..+.++|...+....+..... .-.+++.. ++..++.++.++ .+.++|.....-..+...... ..+++
T Consensus 284 ~~i~~w~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~t~~~d~------~i~~w~~~~~~~~~~~~~~~~---v~~~~~ 352 (577)
T 2ymu_A 284 KTVKLWNRNGQLLQTLTGHSS--SVWGVAFSPDGQTIASASDDK------TVKLWNRNGQHLQTLTGHSSS---VWGVAF 352 (577)
T ss_dssp SCEEEEETTSCEEEEECCCSS--CEEEEEECTTSSEEEEEETTS------CEEEEETTSCEEEEECCCSSC---EEEEEE
T ss_pred CEEEEEeCCCcEEEEEecCCC--CeEEEEECCCCCEEEEEeCCC------eEEEEeCCCCeeEEEeCCCCC---EEEEEE
Confidence 357777765443332221111 11222222 455556555432 377888766554443322111 11222
Q ss_pred EECCEEEEEecCcceEEEEECCCCCeeeccCCCCCC-ceEE-EcCeEEEEeC--cEEEEecCCc
Q 019186 206 VIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQG-PMAI-VHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 206 ~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~~-~~~~-~~~~l~~~~~--~~i~~~d~~~ 265 (345)
.-+++.++.|+....+..||.....-..+....... .++. .+++.++.++ +.+..||...
T Consensus 353 s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~ 416 (577)
T 2ymu_A 353 SPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 416 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC
T ss_pred CCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 225666677766677888887554444332211111 1111 2455555544 6777777543
No 230
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.19 E-value=3.1 Score=35.01 Aligned_cols=96 Identities=10% Similarity=0.204 Sum_probs=48.6
Q ss_pred CceEEEeCCCC--CcccCCCCCCCce-eeeeeEe---CCeEEEEcCcCCCCCCCceEEEEeCCCC-------ceEeCCCC
Q 019186 128 NEVWSYDPVTR--QWSPRASMLVPRA-MFACCAL---KEKIVVAGGFTSCRKSISQAEMYDPEKD-------VWVPIPDL 194 (345)
Q Consensus 128 ~~~~~yd~~t~--~W~~~~~~~~~r~-~~~~~~~---~~~iyv~gG~~~~~~~~~~v~~yd~~~~-------~W~~~~~~ 194 (345)
..+.+||..++ .++....+..... -.+++.. ++.+++.|+.++ .+.+||..+. .|..+..+
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 33 QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC------eEEEEecCCCcccccccCcceeeee
Confidence 35777777644 2333222221111 1223332 367777776543 3788887664 23333222
Q ss_pred CccCCCceeEEEE--C--CEEEEEecCcceEEEEECCCCC
Q 019186 195 HRTHNSACTGVVI--G--GKVHVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 195 ~~~~~~~~~~~~~--~--~~iyv~gG~~~~i~~yd~~~~~ 230 (345)
... ......+.. + +.+++.++....+..||..+.+
T Consensus 107 ~~~-~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 107 NDS-KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CCC-SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ccc-CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 222 222222322 2 5666676677889999987653
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=91.64 E-value=9.8 Score=36.48 Aligned_cols=187 Identities=8% Similarity=-0.058 Sum_probs=93.1
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCE-EEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCccc--
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGK-LFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSP-- 142 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~-- 142 (345)
...++++|..+++..... .+.. ......-+ +++ ||..... +.. .+..........+++++..+.+=..
T Consensus 154 ~~~i~v~dl~tg~~~~~~-~~~~---k~~~~~Ws-Dg~~l~y~~~~-~~~---~~~~~~~~~~~~v~~~~lgt~~~~~~~ 224 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETP-LKDV---KFSGISWL-GNEGFFYSSYD-KPD---GSELSARTDQHKVYFHRLGTAQEDDRL 224 (693)
T ss_dssp EEEEEEEETTTCSEEEEE-EEEE---ESCCCEEE-TTTEEEEEESS-CCC----------CCCCEEEEEETTSCGGGCEE
T ss_pred eEEEEEEECCCCCCCccc-cCCc---eeccEEEe-CCCEEEEEEec-Ccc---cccccccCCCcEEEEEECCCCcccceE
Confidence 357889999998865431 1110 11112233 555 5444322 110 0000011134678999887765322
Q ss_pred CCCCCC--CceeeeeeE-eCCeEEEEcCcCCCCCCCceEEEEeCCCC--ceEeCCCCCccCCCceeEEEECCEEEEEec-
Q 019186 143 RASMLV--PRAMFACCA-LKEKIVVAGGFTSCRKSISQAEMYDPEKD--VWVPIPDLHRTHNSACTGVVIGGKVHVLHK- 216 (345)
Q Consensus 143 ~~~~~~--~r~~~~~~~-~~~~iyv~gG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG- 216 (345)
+-..+. ......... -+++..++..... ...++++++|..+. .|+.+...... .. ......++.+|+...
T Consensus 225 v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~i~~~d~~~~~~~~~~l~~~~~~-~~-~~~~~~g~~l~~~t~~ 300 (693)
T 3iuj_A 225 VFGAIPAQHHRYVGATVTEDDRFLLISAANS--TSGNRLYVKDLSQENAPLLTVQGDLDA-DV-SLVDNKGSTLYLLTNR 300 (693)
T ss_dssp EESCSGGGCCSEEEEEECTTSCEEEEEEESS--SSCCEEEEEETTSTTCCCEEEECSSSS-CE-EEEEEETTEEEEEECT
T ss_pred EEecCCCCCeEEEEEEEcCCCCEEEEEEccC--CCCcEEEEEECCCCCCceEEEeCCCCc-eE-EEEeccCCEEEEEECC
Confidence 111111 111222222 2555444432221 12368999998765 67766443322 21 123456788998864
Q ss_pred --CcceEEEEECCCC---CeeeccCCCC-CCceEEEcCeEEEEeC----cEEEEecCCc
Q 019186 217 --GLSTVQVLDHMGL---GWTVEDYGWL-QGPMAIVHDSVYLMSH----GLIIKQHRDV 265 (345)
Q Consensus 217 --~~~~i~~yd~~~~---~W~~~~~~~~-~~~~~~~~~~l~~~~~----~~i~~~d~~~ 265 (345)
....++..|+.+. .|+.+.+... .......++.|++... ..++.++.+.
T Consensus 301 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 301 DAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred CCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 3567999998764 4876543322 1233334555554432 4788888765
No 232
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=91.63 E-value=4.2 Score=32.20 Aligned_cols=136 Identities=10% Similarity=0.124 Sum_probs=75.4
Q ss_pred EEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCC-----------CcccCCCCCCCceeeeeeE-eCCeEE
Q 019186 96 GVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR-----------QWSPRASMLVPRAMFACCA-LKEKIV 163 (345)
Q Consensus 96 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~-----------~W~~~~~~~~~r~~~~~~~-~~~~iy 163 (345)
+++..+|++|+|=|. .+|+++.... .|.. +|... .++... .++++|
T Consensus 11 Ai~~~~g~~yfFkg~------------------~~Wr~~~~~~~~~~~p~~Is~~w~g---lP~~I-DAa~~~~~~~~~y 68 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG------------------KYWRFSEGRGSRPQGPFLIADKWPA---LPRKL-DSVFEEPLSKKLF 68 (195)
T ss_dssp EEEEETTEEEEEETT------------------EEEEECCSSSCCCEEEEEHHHHCTT---SCSSC-SEEEECTTTCCEE
T ss_pred EEEEeCCEEEEEECC------------------EEEEEECCccccCCCcEEhhhccCC---CCCCc-cEEEEECCCCeEE
Confidence 455679999999774 5788876542 1333 33211 111111 268899
Q ss_pred EEcCcCCCCCCCceEEEEeCCCCce-EeCC--CCCcc-CCCceeEEEECCEEEEEecCcceEEEEECCCCC---------
Q 019186 164 VAGGFTSCRKSISQAEMYDPEKDVW-VPIP--DLHRT-HNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLG--------- 230 (345)
Q Consensus 164 v~gG~~~~~~~~~~v~~yd~~~~~W-~~~~--~~~~~-~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~--------- 230 (345)
++-|. ..++|+..+..- +.+. .+|.. ...-.+....++++|++-| +..++||..+++
T Consensus 69 fFkG~--------~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--~~ywr~d~~~~~~~~gyPr~i 138 (195)
T 1itv_A 69 FFSGR--------QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--RRLWRFDVKAQMVDPRSASEV 138 (195)
T ss_dssp EEETT--------EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--TEEEEEETTTTEECGGGCEEH
T ss_pred EEeCC--------EEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--CEEEEEeCCcccccCCCccCh
Confidence 99773 366666432110 1111 12221 0122222233689999964 578999987653
Q ss_pred ---eeeccCCCCCCceEEEcCeEEEEeCcEEEEecCCc
Q 019186 231 ---WTVEDYGWLQGPMAIVHDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 231 ---W~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~d~~~ 265 (345)
|.-++. ...++...+|.+|++.+...+.|+..+
T Consensus 139 ~~~w~Gvp~--~idaa~~~~g~~Yffkg~~y~~~~~~~ 174 (195)
T 1itv_A 139 DRMFPGVPL--DTHDVFQFREKAYFCQDRFYWRVSSRS 174 (195)
T ss_dssp HHHSTTSCS--SCSEEEEETTEEEEEETTEEEEEECCT
T ss_pred hhcCCCCCC--CCCEEEEeCCeEEEEeCCEEEEEECCc
Confidence 222211 123344457899999998888888765
No 233
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=91.59 E-value=8.8 Score=35.96 Aligned_cols=138 Identities=12% Similarity=0.035 Sum_probs=71.5
Q ss_pred CceEEEEeCCCCceEeCCCCCccCCCceeE-EEECCE-EEEEecCcceEEEEECCCCCeee---c-cCCCCCC-ceE-EE
Q 019186 175 ISQAEMYDPEKDVWVPIPDLHRTHNSACTG-VVIGGK-VHVLHKGLSTVQVLDHMGLGWTV---E-DYGWLQG-PMA-IV 246 (345)
Q Consensus 175 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~~-iyv~gG~~~~i~~yd~~~~~W~~---~-~~~~~~~-~~~-~~ 246 (345)
...+.+.|..+.....+...+.. +..+.+ ..-+++ +|+.....+.+..+|.++++-.. + ...+... .+. ..
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~-~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~ 397 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAE-RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH 397 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECC-SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEE
T ss_pred CCeEEEEecCCCccceeeeeecc-ccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeEC
Confidence 35688888776654433333333 222222 223444 55555467889999999886432 2 2222221 222 22
Q ss_pred --cCeEEEEeC---cEEEEecCCc-------eEEeccchhhcccceeEEEEE-C-CeEEEEcceecCCCCcccccccCce
Q 019186 247 --HDSVYLMSH---GLIIKQHRDV-------RKVVASASEFRRRIGFAMIGM-G-DDIYVIGGVIGPDRWNWDIKPMSDV 312 (345)
Q Consensus 247 --~~~l~~~~~---~~i~~~d~~~-------W~~~~~~p~~~~r~~~~~~~~-~-~~l~i~GG~~~~~~~~~~~~~~~~v 312 (345)
.+.+|+.+. ..|..+|.+. |+.+..++.... ....+... + ..+|+---.+.. .+..+.|
T Consensus 398 p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~-g~~~i~~~p~~~~l~v~~~~~~~------~~~~~~v 470 (567)
T 1qks_A 398 PTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGG-GSLFIKTHPNSQYLYVDATLNPE------AEISGSV 470 (567)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS-CCCCEECCTTCSEEEEECTTCSS------HHHHTCE
T ss_pred CCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCC-CCEEEEeCCCCCeEEEecCCCCC------cccCceE
Confidence 367777652 6777787665 998887763211 11112222 3 367774321111 0123578
Q ss_pred eeeccCCC
Q 019186 313 DVLTVGAE 320 (345)
Q Consensus 313 ~~yd~~~~ 320 (345)
.+||..+.
T Consensus 471 ~v~d~~~~ 478 (567)
T 1qks_A 471 AVFDIKAM 478 (567)
T ss_dssp EEEEGGGC
T ss_pred EEEECCcc
Confidence 88888644
No 234
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.35 E-value=5.4 Score=34.56 Aligned_cols=147 Identities=5% Similarity=-0.138 Sum_probs=76.6
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCE-EEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCccc
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGK-LFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSP 142 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~ 142 (345)
...++.+|..+++...+.... ......... ++. |++... ... ......++++|..+++++.
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~-----~~~~~~~~sp~dg~~l~~~~~-~~~----------~~~~~~l~~~d~~~~~~~~ 230 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT-----AWLGHPIYRPFDDSTVGFCHE-GPH----------DLVDARMWLVNEDGSNVRK 230 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEEC-SCS----------SSCSCCCEEEETTSCCCEE
T ss_pred cceEEEEECCCCcEEeeccCC-----cccccceECCCCCCEEEEEec-CCC----------CCCCceEEEEECCCCceeE
Confidence 346788999888776654211 222233333 244 444432 110 0023579999998877766
Q ss_pred CCCCCCCceeeeeeEe-CCe-EEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-CCEEEEEec---
Q 019186 143 RASMLVPRAMFACCAL-KEK-IVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GGKVHVLHK--- 216 (345)
Q Consensus 143 ~~~~~~~r~~~~~~~~-~~~-iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~gG--- 216 (345)
+............+.. +++ |+... .... .....+.++|..+.+.+.+...+.. . ....- +++++++.+
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~-~~~~-~~~~~l~~~d~~~g~~~~l~~~~~~---~-~~~s~~dg~~l~~~~~~~ 304 (396)
T 3c5m_A 231 IKEHAEGESCTHEFWIPDGSAMAYVS-YFKG-QTDRVIYKANPETLENEEVMVMPPC---S-HLMSNFDGSLMVGDGCDA 304 (396)
T ss_dssp SSCCCTTEEEEEEEECTTSSCEEEEE-EETT-TCCEEEEEECTTTCCEEEEEECCSE---E-EEEECSSSSEEEEEECCC
T ss_pred eeccCCCccccceEECCCCCEEEEEe-cCCC-CccceEEEEECCCCCeEEeeeCCCC---C-CCccCCCCceEEEecCCc
Confidence 6541111111222222 454 44432 2211 1124599999998876665443322 1 22334 677666532
Q ss_pred -------------CcceEEEEECCCCCeeec
Q 019186 217 -------------GLSTVQVLDHMGLGWTVE 234 (345)
Q Consensus 217 -------------~~~~i~~yd~~~~~W~~~ 234 (345)
....++.+|+.+++...+
T Consensus 305 p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 305 PVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp ----------CCCCCCEEEEEETTTTBCCEE
T ss_pred ceeeccccccccCCCCcEEEEecccCceEEc
Confidence 136788999887766554
No 235
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=91.26 E-value=5.1 Score=32.54 Aligned_cols=55 Identities=7% Similarity=-0.081 Sum_probs=35.3
Q ss_pred CCEEEEEecCcceEEEEECCCCCeee----c----cCC-----CCCCceEEE---cCeEEEEeCcEEEEecCC
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGLGWTV----E----DYG-----WLQGPMAIV---HDSVYLMSHGLIIKQHRD 264 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~~W~~----~----~~~-----~~~~~~~~~---~~~l~~~~~~~i~~~d~~ 264 (345)
++++|++-| +..++||..+++... + +.. +...-++.. ++++|++.+...+.||..
T Consensus 127 ~gk~yfFkG--~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~~ywr~d~~ 197 (225)
T 3oyo_A 127 GKEVYLFKG--NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQNYVRIDFT 197 (225)
T ss_dssp TTEEEEEET--TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETTEEEEEECC
T ss_pred CCcEEEEeC--CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECCEEEEEeCC
Confidence 689999975 568889876655432 0 111 111223333 678888888888888876
No 236
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.18 E-value=6.1 Score=33.24 Aligned_cols=196 Identities=11% Similarity=-0.012 Sum_probs=91.5
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEE-ECCEEEEE----cCCCCCCCCCCCCCCCCcCcCc
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS-TAGKLFVL----GGGSDAVDPLTGDQDGSFATNE 129 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~lyv~----GG~~~~~~~~~~~~~~~~~~~~ 129 (345)
++.+|+... ....+..||+. ++.+.+...........-..++. -+|.||+. |....... ...........
T Consensus 96 dG~l~v~~~-~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~---~~~~~~~~~~~ 170 (305)
T 3dr2_A 96 QQRLVHCEH-GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQG---CPADPELAHHS 170 (305)
T ss_dssp TSCEEEEET-TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGS---CCCCCSSSCEE
T ss_pred CCCEEEEEC-CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccc---cccccccCCCe
Confidence 445665532 23578888886 66665532211100011112333 36788885 32110000 00000112357
Q ss_pred eEEEeCCCCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCCCCceE---eCCCCCccCCCceeE
Q 019186 130 VWSYDPVTRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPEKDVWV---PIPDLHRTHNSACTG 204 (345)
Q Consensus 130 ~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~~~~W~---~~~~~~~~~~~~~~~ 204 (345)
+++||+.+++.+.+. ... .-.+++.. ++ .+|+...... ......+++||...+... .+...... ....-.
T Consensus 171 v~~~d~~~g~~~~~~--~~~-~p~gl~~spdg~~lyv~~~~~~-~~~~~~i~~~~~~~~~l~~~~~~~~~~~~-~pdgi~ 245 (305)
T 3dr2_A 171 VYRLPPDGSPLQRMA--DLD-HPNGLAFSPDEQTLYVSQTPEQ-GHGSVEITAFAWRDGALHDRRHFASVPDG-LPDGFC 245 (305)
T ss_dssp EEEECSSSCCCEEEE--EES-SEEEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSS-CCCSEE
T ss_pred EEEEcCCCCcEEEEe--cCC-CCcceEEcCCCCEEEEEecCCc-CCCCCEEEEEEecCCCccCCeEEEECCCC-CCCeEE
Confidence 999999888876653 111 11233333 44 5777754211 011256889987755321 11111111 111111
Q ss_pred EEECCEEEEEecCcceEEEEECCCCCeeeccCCCCCCceEE--EcCeEEEEeCcEEEEec
Q 019186 205 VVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAI--VHDSVYLMSHGLIIKQH 262 (345)
Q Consensus 205 ~~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~~~~~~--~~~~l~~~~~~~i~~~d 262 (345)
+--++.||+.. ...+.+||+.......+........++. -++.||+.....++.++
T Consensus 246 ~d~~G~lwv~~--~~gv~~~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 246 VDRGGWLWSSS--GTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp ECTTSCEEECC--SSEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred ECCCCCEEEec--CCcEEEECCCCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 22357788776 3569999997665554432211122222 12357766666666654
No 237
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.11 E-value=2.8 Score=35.38 Aligned_cols=93 Identities=9% Similarity=-0.043 Sum_probs=51.0
Q ss_pred ceEEEEeCCCCceEeCCCCCccCC-CceeEE-EECC-EEEEEecCcceEEEEECCCCCeee-ccCCC------CCCceEE
Q 019186 176 SQAEMYDPEKDVWVPIPDLHRTHN-SACTGV-VIGG-KVHVLHKGLSTVQVLDHMGLGWTV-EDYGW------LQGPMAI 245 (345)
Q Consensus 176 ~~v~~yd~~~~~W~~~~~~~~~~~-~~~~~~-~~~~-~iyv~gG~~~~i~~yd~~~~~W~~-~~~~~------~~~~~~~ 245 (345)
..+.++|+.+.+-...-..+.. . ....++ .-++ .+|+.+.....+..+|+.+++-.. +.... ....++.
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADA-GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAAL 89 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTC-TTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEE
T ss_pred CeEEEEECCCCcEEEEEEcCCC-CCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEE
Confidence 4588899888754322122221 0 011222 2244 688887666789999998876432 22111 1223333
Q ss_pred E-cC-eEEEEe-------------CcEEEEecCCceEEe
Q 019186 246 V-HD-SVYLMS-------------HGLIIKQHRDVRKVV 269 (345)
Q Consensus 246 ~-~~-~l~~~~-------------~~~i~~~d~~~W~~~ 269 (345)
. ++ .+|+.+ ...+..+|.++.+.+
T Consensus 90 s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 90 SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred CCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 2 44 677764 378889998774333
No 238
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=90.93 E-value=7.4 Score=36.78 Aligned_cols=146 Identities=15% Similarity=-0.005 Sum_probs=81.0
Q ss_pred CeEEEEeCC-CCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 67 NLWQLYDPL-RDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 67 ~~~~~yd~~-~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
..++++|.. ++++.+...+.... .......+.. +|++|+.+... ....++++|+.+++++++.
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~--------------~~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIVATDRT--------------GWWNLHRVDPATGAATQLC 281 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEEEECTT--------------SSCEEEEECTTTCCEEESS
T ss_pred cEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEEEECCC--------------CCeEEEEEECCCCceeecc
Confidence 579999998 56332222221110 0122233333 67777666532 1347999999888887765
Q ss_pred CCCCCc----e---eeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeE-EEECCEEEEEe
Q 019186 145 SMLVPR----A---MFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTG-VVIGGKVHVLH 215 (345)
Q Consensus 145 ~~~~~r----~---~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~~iyv~g 215 (345)
...... . ....+.. ++++++.+.. + ...++.+|..+...+.+...... .... ...++.+++..
T Consensus 282 ~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~----~~~l~~~d~~~~~~~~l~~~~~~---~~~~~s~~~~~~~~~~ 353 (662)
T 3azo_A 282 RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G----AAVLGILDPESGELVDAAGPWTE---WAATLTVSGTRAVGVA 353 (662)
T ss_dssp CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S----SCEEEEEETTTTEEEECCSSCCE---EEEEEEEETTEEEEEE
T ss_pred cccccccCccccccCceEeEeCCCEEEEEEEc-C----ccEEEEEECCCCcEEEecCCCCe---EEEEEecCCCEEEEEE
Confidence 432111 0 1123333 6677666543 2 45688889888877766432211 1222 33466666664
Q ss_pred c---CcceEEEEECCCCCeeecc
Q 019186 216 K---GLSTVQVLDHMGLGWTVED 235 (345)
Q Consensus 216 G---~~~~i~~yd~~~~~W~~~~ 235 (345)
+ ....++.+|+.+++...+.
T Consensus 354 ~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 354 ASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EETTEEEEEEEEETTTCCEEEEE
T ss_pred cCCCCCCEEEEEECCCCceEEee
Confidence 4 3357888898888776653
No 239
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.90 E-value=8 Score=35.81 Aligned_cols=143 Identities=8% Similarity=0.007 Sum_probs=74.1
Q ss_pred EEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCC
Q 019186 58 LCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPV 136 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~ 136 (345)
+++.|+.....+.+||..+++... ..+... ...-.+++.. ++++++.|+. ...+.+||..
T Consensus 458 ~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~--~~~v~~~~~s~~g~~l~~~~~----------------dg~i~iw~~~ 518 (615)
T 1pgu_A 458 YVAVGLEEGNTIQVFKLSDLEVSF-DLKTPL--RAKPSYISISPSETYIAAGDV----------------MGKILLYDLQ 518 (615)
T ss_dssp EEEEEETTTSCEEEEETTEEEEEE-ECSSCC--SSCEEEEEECTTSSEEEEEET----------------TSCEEEEETT
T ss_pred EEEEeecCCCeEEEEECCCccccc-cccCCc--cCceEEEEECCCCCEEEEcCC----------------CCeEEEeeCC
Confidence 344444324678899998876532 222211 0122233333 6677777764 2468899998
Q ss_pred CCCcccCCCCCCCceeeeeeE-e----------CCeEEEEcCcCCCCCCCceEEEEeCCCC-c-eEeCCCCCccCCCcee
Q 019186 137 TRQWSPRASMLVPRAMFACCA-L----------KEKIVVAGGFTSCRKSISQAEMYDPEKD-V-WVPIPDLHRTHNSACT 203 (345)
Q Consensus 137 t~~W~~~~~~~~~r~~~~~~~-~----------~~~iyv~gG~~~~~~~~~~v~~yd~~~~-~-W~~~~~~~~~~~~~~~ 203 (345)
+.+-...-.-.....-.+++. - ++.+++.|+.++ .+.+||..+. + ...+..... .....
T Consensus 519 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~h~~--~v~~l 590 (615)
T 1pgu_A 519 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT------NIFIYSVKRPMKIIKALNAHKD--GVNNL 590 (615)
T ss_dssp TTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS------CEEEEESSCTTCCEEETTSSTT--CEEEE
T ss_pred CCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCC------cEEEEECCCCceechhhhcCcc--ceEEE
Confidence 765322211101111122222 1 577777776543 4899998875 2 333221111 11222
Q ss_pred EEEECCEEEEEecCcceEEEEECCC
Q 019186 204 GVVIGGKVHVLHKGLSTVQVLDHMG 228 (345)
Q Consensus 204 ~~~~~~~iyv~gG~~~~i~~yd~~~ 228 (345)
...-++. .+.+|....+..+|+.+
T Consensus 591 ~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 591 LWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEcCCCC-eEEecCCceEEEEeeec
Confidence 3355788 66776667788887654
No 240
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=90.86 E-value=7.4 Score=33.61 Aligned_cols=167 Identities=13% Similarity=-0.014 Sum_probs=77.8
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI 207 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 207 (345)
..+.+||..+++-...-..+. .-.++....+.+++.. ...+.+||..+.. +.+..+..+ . ...+..
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~--------~~~i~i~d~~~~~-~~~~~~~~~-~--~~~~~s 146 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRIKVDA--PVKDLFLSREFIVVSY--------GDVISVFKFGNPW-KRITDDIRF-G--GVCEFS 146 (355)
T ss_dssp TEEEEEETTTTEEEEEEECSS--CEEEEEECSSEEEEEE--------TTEEEEEESSTTC-CBSSCCEEE-E--EEEEEE
T ss_pred cEEEEEECCCCcEEEEEECCC--ceEEEEEcCCEEEEEE--------cCEEEEEECCCCc-eeeEEeccC-C--ceEEEE
Confidence 378899998775322111111 1122333344444442 1358899987751 111111111 1 111122
Q ss_pred CCEEEEE-ecCcceEEEEECCCCC-----------------eeeccCCCCCC-ceEE-EcCeEEEEeC--cE-EEEecCC
Q 019186 208 GGKVHVL-HKGLSTVQVLDHMGLG-----------------WTVEDYGWLQG-PMAI-VHDSVYLMSH--GL-IIKQHRD 264 (345)
Q Consensus 208 ~~~iyv~-gG~~~~i~~yd~~~~~-----------------W~~~~~~~~~~-~~~~-~~~~l~~~~~--~~-i~~~d~~ 264 (345)
.+.+.+. |+....+..||..+.. -..+....... .++. .++.+++.++ +. +..+|..
T Consensus 147 ~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 147 NGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp TTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred ccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 2444444 4466789999988653 12221111111 1111 2566555554 55 8888988
Q ss_pred ceEEeccchhh-cccceeEEE-EECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 265 VRKVVASASEF-RRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 265 ~W~~~~~~p~~-~~r~~~~~~-~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.+.+..+... ....-..++ .-+++.++.|+.++ .|.+||+...
T Consensus 227 ~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~------------~v~iw~~~~~ 272 (355)
T 3vu4_A 227 DGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW------------TLHVFEIFND 272 (355)
T ss_dssp TCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTC------------EEEEEESSCC
T ss_pred CCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC------------EEEEEEccCC
Confidence 75555443310 111112222 23677777776432 4677777543
No 241
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=90.83 E-value=7.7 Score=33.79 Aligned_cols=143 Identities=10% Similarity=0.083 Sum_probs=72.1
Q ss_pred CCCeEEEEeCCCCCEEeCCC--CCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCc
Q 019186 65 PENLWQLYDPLRDLWITLPV--LPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQW 140 (345)
Q Consensus 65 ~~~~~~~yd~~~~~W~~~~~--~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W 140 (345)
....+.++|..+++-...-. .+..+ ...-.++... ++.+++.|+.+ ..+.+||.....
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~sgs~D----------------~~v~~wd~~~~~- 239 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGH-TADVLSLSINSLNANMFISGSCD----------------TTVRLWDLRITS- 239 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSC-CSCEEEEEECSSSCCEEEEEETT----------------SCEEEEETTTTC-
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCC-ccCeEEEEeecCCCCEEEEEECC----------------CeEEEEECCCCC-
Confidence 34678899998876543211 11110 0111223332 56788887752 468888886321
Q ss_pred ccCCCCCCCce-eeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeC-CCCCc---cCC--CceeEEEECCEEE
Q 019186 141 SPRASMLVPRA-MFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPI-PDLHR---THN--SACTGVVIGGKVH 212 (345)
Q Consensus 141 ~~~~~~~~~r~-~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~-~~~~~---~~~--~~~~~~~~~~~iy 212 (345)
..+..+..... -.+++.. ++..++.|+.++ .+.+||..+..-... ...+. ... ........++.+.
T Consensus 240 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 313 (380)
T 3iz6_a 240 RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLL 313 (380)
T ss_dssp CCCEEECCCSSCCCEEEECTTSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEE
T ss_pred cceEEECCcCCCeEEEEEecCCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEE
Confidence 01111111111 1122222 567777777653 388999887653222 11111 001 1112223367777
Q ss_pred EEecCcceEEEEECCCCCe
Q 019186 213 VLHKGLSTVQVLDHMGLGW 231 (345)
Q Consensus 213 v~gG~~~~i~~yd~~~~~W 231 (345)
+.|+....+..||..+.+-
T Consensus 314 ~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 314 FAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp EEECTTSCEEEEETTTCCE
T ss_pred EEEECCCCEEEEECCCCce
Confidence 7777777889999876644
No 242
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.73 E-value=1.9 Score=37.49 Aligned_cols=134 Identities=8% Similarity=-0.049 Sum_probs=69.1
Q ss_pred cCceEEEeCCCCCcccCCCCCCCceeeeeeEe--CCe-EEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee
Q 019186 127 TNEVWSYDPVTRQWSPRASMLVPRAMFACCAL--KEK-IVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT 203 (345)
Q Consensus 127 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~-iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 203 (345)
...++++|+.+++.+.+... .......... ++. |+.... .........++.+|..+..++.+.. ..+ .....
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~-~~~~~ 241 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAE-GESCT 241 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCT-TEEEE
T ss_pred cceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCC-Ccccc
Confidence 45789999988776554321 1111122222 343 444432 1111112578999998887776644 111 11111
Q ss_pred EE--EECCE-EEEEec--Cc--ceEEEEECCCCCeeeccCCCCCCceEEE-cCeEEEEe------------------CcE
Q 019186 204 GV--VIGGK-VHVLHK--GL--STVQVLDHMGLGWTVEDYGWLQGPMAIV-HDSVYLMS------------------HGL 257 (345)
Q Consensus 204 ~~--~~~~~-iyv~gG--~~--~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~l~~~~------------------~~~ 257 (345)
.. .-+++ |++... .. ..++.+|+.+++...+...+........ +|+++++. ...
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 12 22454 444421 12 4499999988877665432221112223 67766652 267
Q ss_pred EEEecCCc
Q 019186 258 IIKQHRDV 265 (345)
Q Consensus 258 i~~~d~~~ 265 (345)
++.+|.++
T Consensus 322 i~~~d~~~ 329 (396)
T 3c5m_A 322 LYVLNTKA 329 (396)
T ss_dssp EEEEETTT
T ss_pred EEEEeccc
Confidence 88888765
No 243
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=90.72 E-value=8.1 Score=33.89 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=39.0
Q ss_pred cCeEEEEeC-----------cEEEEecCCceEEeccchhhcccceeEEEEE-CCe-EEEEcceecCCCCcccccccCcee
Q 019186 247 HDSVYLMSH-----------GLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GDD-IYVIGGVIGPDRWNWDIKPMSDVD 313 (345)
Q Consensus 247 ~~~l~~~~~-----------~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~-~~~-l~i~GG~~~~~~~~~~~~~~~~v~ 313 (345)
++++|+... +.+..+|.++.+.+..++. ....++++.- +++ +++++.... ++|.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~-----------~~V~ 344 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALSAGT-----------EVLH 344 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCC-----------CeEE
Confidence 468888642 5799999999888777762 3333444433 555 444433222 3799
Q ss_pred eeccCCC
Q 019186 314 VLTVGAE 320 (345)
Q Consensus 314 ~yd~~~~ 320 (345)
+||..+.
T Consensus 345 ViD~~t~ 351 (373)
T 2mad_H 345 IYDAGAG 351 (373)
T ss_pred EEECCCC
Confidence 9999865
No 244
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.72 E-value=7.3 Score=33.36 Aligned_cols=208 Identities=10% Similarity=0.078 Sum_probs=103.3
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEE-ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
.+.+|+.|.. ..++.-+-.-.+|+.+......+ -....++. -++.+|+.+.. ..+++-
T Consensus 89 ~~~~~~~g~~--g~i~~S~DgG~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~-----------------g~v~~S 147 (327)
T 2xbg_A 89 GNEGWIVGEP--PIMLHTTDGGQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNV-----------------GAIYRT 147 (327)
T ss_dssp TTEEEEEEET--TEEEEESSTTSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETT-----------------CCEEEE
T ss_pred CCeEEEEECC--CeEEEECCCCCCceECccccCCC--CCeEEEEEECCCCEEEEeCC-----------------ccEEEE
Confidence 3566766532 23333222346899986432110 11233433 46788887742 135555
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEE-eCCCCceEeCCCCCccCCCceeEEE-ECCE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMY-DPEKDVWVPIPDLHRTHNSACTGVV-IGGK 210 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~y-d~~~~~W~~~~~~~~~~~~~~~~~~-~~~~ 210 (345)
+-.-++|+.+..... ...+.++.. ++.++++|.. + .++.- |..-.+|+.+.... . .....++. -++.
T Consensus 148 ~DgG~tW~~~~~~~~-~~~~~~~~~~~~~~~~~g~~-G------~~~~S~d~gG~tW~~~~~~~-~-~~~~~~~~~~~g~ 217 (327)
T 2xbg_A 148 KDSGKNWQALVQEAI-GVMRNLNRSPSGEYVAVSSR-G------SFYSTWEPGQTAWEPHNRTT-S-RRLHNMGFTPDGR 217 (327)
T ss_dssp SSTTSSEEEEECSCC-CCEEEEEECTTSCEEEEETT-S------SEEEEECTTCSSCEEEECCS-S-SCEEEEEECTTSC
T ss_pred cCCCCCCEEeecCCC-cceEEEEEcCCCcEEEEECC-C------cEEEEeCCCCCceeECCCCC-C-CccceeEECCCCC
Confidence 445678988754222 223334333 5667666531 1 13433 33357898874322 2 22233332 3677
Q ss_pred EEEEecCcceEEEEECC-CCCeeeccCC--CCC---CceEEE-cCeEEEEeC-cEE-EEecCCc-eEEeccchhhcccce
Q 019186 211 VHVLHKGLSTVQVLDHM-GLGWTVEDYG--WLQ---GPMAIV-HDSVYLMSH-GLI-IKQHRDV-RKVVASASEFRRRIG 280 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~-~~~W~~~~~~--~~~---~~~~~~-~~~l~~~~~-~~i-~~~d~~~-W~~~~~~p~~~~r~~ 280 (345)
+|+++. ...+...+.. ..+|+.+... +.. ..++.. ++.+|+.+. +.+ ...|... |+.+..... .+...
T Consensus 218 ~~~~~~-~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~-~~~~~ 295 (327)
T 2xbg_A 218 LWMIVN-GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVDVKK-VPSNF 295 (327)
T ss_dssp EEEEET-TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEESSTTSSCEECGGGTT-SSSCC
T ss_pred EEEEeC-CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEeCCCCcccEEcCccCC-CCCCe
Confidence 888763 3445554333 4579877533 121 112222 678888876 434 4455444 999864310 11222
Q ss_pred eEEEE-ECCeEEEEcc
Q 019186 281 FAMIG-MGDDIYVIGG 295 (345)
Q Consensus 281 ~~~~~-~~~~l~i~GG 295 (345)
+.++. -++.++++|.
T Consensus 296 ~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 296 YKILFFSPDQGFILGQ 311 (327)
T ss_dssp CEEEEEETTEEEEECS
T ss_pred EEEEEECCCceEEEcC
Confidence 34433 3566666543
No 245
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=90.48 E-value=7.2 Score=35.08 Aligned_cols=60 Identities=7% Similarity=0.158 Sum_probs=40.2
Q ss_pred cCeEEEEe-----------CcEEEEecCCceEEeccchhhcccceeEEEEE-CCe--EEEEcceecCCCCcccccccCce
Q 019186 247 HDSVYLMS-----------HGLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GDD--IYVIGGVIGPDRWNWDIKPMSDV 312 (345)
Q Consensus 247 ~~~l~~~~-----------~~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~-~~~--l~i~GG~~~~~~~~~~~~~~~~v 312 (345)
++++|+.. .+.+..+|..+++.+..++ ......+++.- +++ +|+.-. . -++|
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~--vg~~P~gia~spDg~~~lyv~n~-~-----------s~~V 395 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE--LGHEIDSINVSQDAEPLLYALSA-G-----------TQTL 395 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECCSSSCEEEEEET-T-----------TTEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE--CCCCcCeEEEccCCCEEEEEEcC-C-----------CCeE
Confidence 47889875 2589999999988888887 33334455433 444 555432 1 1478
Q ss_pred eeeccCCC
Q 019186 313 DVLTVGAE 320 (345)
Q Consensus 313 ~~yd~~~~ 320 (345)
-++|..+.
T Consensus 396 sVID~~t~ 403 (426)
T 3c75_H 396 HIYDAATG 403 (426)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 99999865
No 246
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=90.46 E-value=13 Score=35.68 Aligned_cols=99 Identities=10% Similarity=-0.124 Sum_probs=53.4
Q ss_pred eEEEEeCCCCCEEeCCCCCcccc---------------c-----cceeEEEE-ECCEEEEEcCCCCCCCCCCCCCCCCcC
Q 019186 68 LWQLYDPLRDLWITLPVLPSKIR---------------H-----LAHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFA 126 (345)
Q Consensus 68 ~~~~yd~~~~~W~~~~~~~~~~~---------------~-----~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~ 126 (345)
.++++|..+++...+.......+ . ..-.+++. -+++.+++++.
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~---------------- 128 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG---------------- 128 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET----------------
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC----------------
Confidence 89999999998766543221100 0 00112222 35665555542
Q ss_pred cCceEEEeCCCC---CcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC
Q 019186 127 TNEVWSYDPVTR---QWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP 192 (345)
Q Consensus 127 ~~~~~~yd~~t~---~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~ 192 (345)
..++++|..++ +-+.+..... .....+.. +++.++++.. ..++++|..+.+...+.
T Consensus 129 -~~i~~~d~~~~~~~~~~~l~~~~~--~~~~~~~SPDG~~la~~~~-------~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 129 -GELYLYDLKQEGKAAVRQLTHGEG--FATDAKLSPKGGFVSFIRG-------RNLWVIDLASGRQMQLT 188 (741)
T ss_dssp -TEEEEEESSSCSTTSCCBCCCSSS--CEEEEEECTTSSEEEEEET-------TEEEEEETTTTEEEECC
T ss_pred -CcEEEEECCCCCcceEEEcccCCc--ccccccCCCCCCEEEEEeC-------CcEEEEecCCCCEEEec
Confidence 46999999887 5444433211 11222222 5554444421 26999999888766553
No 247
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=90.41 E-value=8.1 Score=33.39 Aligned_cols=159 Identities=9% Similarity=-0.072 Sum_probs=76.2
Q ss_pred CcEEEEEec-CCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAF-DPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
+..|+.... .....++.+|+.+++-.++...+.. .......+-+++.+++... ...++++
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~---~~~~~~~spdg~~l~~~~~----------------~~~l~~~ 107 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD---NTFGGFLSPDDDALFYVKD----------------GRNLMRV 107 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB---CSSSCEECTTSSEEEEEET----------------TTEEEEE
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC---CccceEEcCCCCEEEEEeC----------------CCeEEEE
Confidence 444444443 2344799999999988877654432 1111122335554444432 1368999
Q ss_pred eCCCCCcccCCCCCCCceeeeee--EeCCeEEEEcCcCC----------------CCCCCceEEEEeCCCCceEeCCCCC
Q 019186 134 DPVTRQWSPRASMLVPRAMFACC--ALKEKIVVAGGFTS----------------CRKSISQAEMYDPEKDVWVPIPDLH 195 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~--~~~~~iyv~gG~~~----------------~~~~~~~v~~yd~~~~~W~~~~~~~ 195 (345)
|+.+++-+.+...+......... .-+++.++.-.... .......++.+|+++.+-+.+....
T Consensus 108 d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 187 (388)
T 3pe7_A 108 DLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN 187 (388)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES
T ss_pred ECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC
Confidence 99888755443333332211111 22444433210000 0112367889998887655443211
Q ss_pred ccCCCceeEEEE-CCEEEEE-e-c----CcceEEEEECCCCCeeec
Q 019186 196 RTHNSACTGVVI-GGKVHVL-H-K----GLSTVQVLDHMGLGWTVE 234 (345)
Q Consensus 196 ~~~~~~~~~~~~-~~~iyv~-g-G----~~~~i~~yd~~~~~W~~~ 234 (345)
. ........- +++.+++ . + ....++.+|........+
T Consensus 188 ~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 188 Q--WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp S--CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES
T ss_pred c--cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe
Confidence 1 111222222 4443332 2 1 134677777766555444
No 248
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.40 E-value=7.8 Score=33.16 Aligned_cols=144 Identities=10% Similarity=-0.058 Sum_probs=85.0
Q ss_pred EEEE--ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC--CCCCCceeeeeeE--eCCeEEEEcCcC
Q 019186 96 GVVS--TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA--SMLVPRAMFACCA--LKEKIVVAGGFT 169 (345)
Q Consensus 96 ~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~gG~~ 169 (345)
++++ .++.||+.-.. ...++++++....-+.+. .+..+ .++++ .++.||+.-..
T Consensus 83 glavd~~~g~ly~~d~~----------------~~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~- 142 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSE----------------TNRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG- 142 (318)
T ss_dssp EEEEETTTTEEEEEETT----------------TTEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS-
T ss_pred EEEEEcCCCeEEEEECC----------------CCEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC-
Confidence 3444 37889988542 346888988654322221 22222 23333 36889887421
Q ss_pred CCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeeecc--CCCCCCceEE
Q 019186 170 SCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVED--YGWLQGPMAI 245 (345)
Q Consensus 170 ~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~~--~~~~~~~~~~ 245 (345)
....++++++....-+.+.. .......+++.- +++||+.......|+++|+....-+.+. ....+..+++
T Consensus 143 ----~~~~I~r~~~dG~~~~~~~~--~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav 216 (318)
T 3sov_A 143 ----EVPKIERAGMDGSSRFIIIN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL 216 (318)
T ss_dssp ----SSCEEEEEETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE
T ss_pred ----CCCEEEEEEcCCCCeEEEEE--CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE
Confidence 13568999887543222211 110122333433 6899999877789999998754333332 2233566777
Q ss_pred EcCeEEEEeC--cEEEEecCCc
Q 019186 246 VHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 246 ~~~~l~~~~~--~~i~~~d~~~ 265 (345)
.++.+|..+. ..|..+++.+
T Consensus 217 ~~~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 217 FEDILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp ETTEEEEEETTTTEEEEEETTT
T ss_pred eCCEEEEEecCCCeEEEEECCC
Confidence 8889999876 7888888754
No 249
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=90.17 E-value=7.9 Score=33.47 Aligned_cols=153 Identities=7% Similarity=-0.090 Sum_probs=73.0
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS 145 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 145 (345)
..++.+|..+++-..+..... .......+- +++.+++...... ......++.+|..+...+.+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~----~~~~~~~sp~dg~~l~~~~~~~~----------~~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ----WLGHPIYRPYDDSTVAFCHEGPH----------DLVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS----CEEEEEEETTEEEEEEEEECSCT----------TTSSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeecCCc----cccccEECCCCCCEEEEEEecCC----------CCCcceEEEEeCCCCceEEeee
Confidence 578889998887665542221 112222222 4554433322110 0124589999998776666544
Q ss_pred CCCCceeeeeeEe-CCe-EEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCcc----CCCceeEEEECCE-EEEEe---
Q 019186 146 MLVPRAMFACCAL-KEK-IVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRT----HNSACTGVVIGGK-VHVLH--- 215 (345)
Q Consensus 146 ~~~~r~~~~~~~~-~~~-iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~----~~~~~~~~~~~~~-iyv~g--- 215 (345)
..........+.. +++ |+......+ .....++++|+++.+-+.+..++.. .........-+++ |++..
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKG--SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETT--CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred CCCCcccccceECCCCCEEEEEecCCC--CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence 3221111122222 554 433332211 1123599999998876655433320 0000112233333 33321
Q ss_pred -----cCcceEEEEECCCCCeeecc
Q 019186 216 -----KGLSTVQVLDHMGLGWTVED 235 (345)
Q Consensus 216 -----G~~~~i~~yd~~~~~W~~~~ 235 (345)
+....++.+|+.+++-+.+.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp -----CCCCEEEEEETTTTEEEEEE
T ss_pred cccccCCCCEEEEEeccCCceEEec
Confidence 23557888998887665543
No 250
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=89.87 E-value=8.6 Score=32.84 Aligned_cols=21 Identities=14% Similarity=0.107 Sum_probs=15.9
Q ss_pred CCEEEEEecCcceEEEEECCC
Q 019186 208 GGKVHVLHKGLSTVQVLDHMG 228 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~ 228 (345)
+++.++.|+....+..||..+
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp TSSEEEEEETTCEEEEEESSC
T ss_pred CCCEEEEEcCCCeEEEEECCC
Confidence 667777777778889999843
No 251
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=89.83 E-value=13 Score=35.65 Aligned_cols=183 Identities=8% Similarity=-0.041 Sum_probs=92.4
Q ss_pred cCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCC-------CCCCceEEEEeCCCCce--EeCCCCCc-
Q 019186 127 TNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSC-------RKSISQAEMYDPEKDVW--VPIPDLHR- 196 (345)
Q Consensus 127 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~-------~~~~~~v~~yd~~~~~W--~~~~~~~~- 196 (345)
..+++++|+.+++.... .++..+.....-. +++-+++...... ......++.++..+..= ..+-..+.
T Consensus 154 ~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~ 231 (693)
T 3iuj_A 154 WREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPA 231 (693)
T ss_dssp EEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGG
T ss_pred eEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCC
Confidence 46899999999886443 1111111122223 5543333322211 02245788888776542 12222222
Q ss_pred -cCCCceeEEEECCE-EEEEec---CcceEEEEECCCC--CeeeccCCCCCC--ceEEEcCeEEEEeC-----cEEEEec
Q 019186 197 -THNSACTGVVIGGK-VHVLHK---GLSTVQVLDHMGL--GWTVEDYGWLQG--PMAIVHDSVYLMSH-----GLIIKQH 262 (345)
Q Consensus 197 -~~~~~~~~~~~~~~-iyv~gG---~~~~i~~yd~~~~--~W~~~~~~~~~~--~~~~~~~~l~~~~~-----~~i~~~d 262 (345)
..........-+++ |++... ..+.++.+|+.+. .|..+....... .....++.||+... ..++..|
T Consensus 232 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d 311 (693)
T 3iuj_A 232 QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVD 311 (693)
T ss_dssp GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEe
Confidence 20111122233555 333322 3468999998765 677765433311 23345778888875 5788888
Q ss_pred CCc-----eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 263 RDV-----RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 263 ~~~-----W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
.++ |+.+.+-. .... .+...++.|++..-.++. ..++++|+... ..+++
T Consensus 312 ~~~~~~~~~~~l~~~~---~~~~-~~s~~g~~lv~~~~~~g~----------~~l~~~d~~g~--~~~~l 365 (693)
T 3iuj_A 312 AANPGPAHWRDLIPER---QQVL-TVHSGSGYLFAEYMVDAT----------ARVEQFDYEGK--RVREV 365 (693)
T ss_dssp TTSCCGGGCEEEECCC---SSCE-EEEEETTEEEEEEEETTE----------EEEEEECTTSC--EEEEE
T ss_pred CCCCCccccEEEecCC---CCEE-EEEEECCEEEEEEEECCe----------eEEEEEECCCC--eeEEe
Confidence 654 87754322 1112 445556666554332222 35777777755 44444
No 252
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=89.79 E-value=14 Score=35.10 Aligned_cols=177 Identities=9% Similarity=-0.049 Sum_probs=104.6
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEE--ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS--TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.||+... ....++.+++.....+.+..... ..-.++++ .+++||+.-.. ...+++
T Consensus 48 ~~~lywtD~-~~~~I~r~~~~g~~~~~v~~~g~----~~P~GlAvD~~~~~LY~tD~~----------------~~~I~v 106 (628)
T 4a0p_A 48 DNRIYWTDI-SLKTISRAFMNGSALEHVVEFGL----DYPEGMAVDWLGKNLYWADTG----------------TNRIEV 106 (628)
T ss_dssp TTEEEEEET-TTTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTEEEEEETT----------------TTEEEE
T ss_pred CCEEEEEEC-CCCeEEEEECCCCCcEEEEeCCC----CCcceEEEEeCCCEEEEEECC----------------CCEEEE
Confidence 566676543 24577778877655544432221 11124555 47889998542 357899
Q ss_pred EeCCCCCcccC--CCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-
Q 019186 133 YDPVTRQWSPR--ASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI- 207 (345)
Q Consensus 133 yd~~t~~W~~~--~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~- 207 (345)
+++....-+.+ ..+..+ .++++- ++.||+.--. ....++..++....-+.+.. . .....++++
T Consensus 107 ~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g-----~~~~I~r~~~dG~~~~~l~~---~-~~~P~GlalD 174 (628)
T 4a0p_A 107 SKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWG-----GKPKIDRAAMDGSERTTLVP---N-VGRANGLTID 174 (628)
T ss_dssp EETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECS-----SSCEEEEEETTSCSCEEEEC---S-CSSEEEEEEE
T ss_pred EecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCC-----CCCEEEEEeCCCCceEEEEC---C-CCCcceEEEc
Confidence 99865432222 122222 244443 6899987421 13578999887655443322 1 222333433
Q ss_pred --CCEEEEEecCcceEEEEECCCCCeeecc-CCCCCCceEEEcCeEEEEeC--cEEEEecCC
Q 019186 208 --GGKVHVLHKGLSTVQVLDHMGLGWTVED-YGWLQGPMAIVHDSVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 208 --~~~iyv~gG~~~~i~~yd~~~~~W~~~~-~~~~~~~~~~~~~~l~~~~~--~~i~~~d~~ 264 (345)
+++||+.-...+.|+++|+....=+.+. ....+..+++.++.||..+. ..|..+|..
T Consensus 175 ~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 175 YAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred cccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECC
Confidence 5899999877788999998654333332 22235677888999999986 778887754
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.75 E-value=4.7 Score=37.85 Aligned_cols=275 Identities=11% Similarity=0.002 Sum_probs=134.0
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEE----ECCEEEEEcCCCCCCCCCCCCC--CCCcCcC
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS----TAGKLFVLGGGSDAVDPLTGDQ--DGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~----~~~~lyv~GG~~~~~~~~~~~~--~~~~~~~ 128 (345)
+.++|+-. ...+.+.+.|+.+.+-..+-.+|.. ..-|+++. ..+.+|+.+....-. +.+|+. ......+
T Consensus 101 G~~lfVnd-~~~~rVavIdl~t~~~~~ii~ip~g---~~phg~~~~~~p~~~~v~~~~~~~~p~-~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 101 GRFLFMND-KANTRVARVRCDVMKCDAILEIPNA---KGIHGLRPQKWPRSNYVFCNGEDETPL-VNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEE-TTTTEEEEEETTTTEEEEEEECSSC---CSEEEEEECCSSBCSEEEEEECSCEES-SCSSSSTTCGGGEEE
T ss_pred CCEEEEEc-CCCCEEEEEECCCceEeeEEeCCCC---CCCcceeeeecCCCcEEEEeccccccc-CCCCcccccccccCc
Confidence 46666633 4456799999999875554345543 33445553 245677775331100 111111 1123456
Q ss_pred ceEEEeCCCCC--cccC-CCCCCCceeeeeeEe-CCeEEEEcCcC-------------------------------CCCC
Q 019186 129 EVWSYDPVTRQ--WSPR-ASMLVPRAMFACCAL-KEKIVVAGGFT-------------------------------SCRK 173 (345)
Q Consensus 129 ~~~~yd~~t~~--W~~~-~~~~~~r~~~~~~~~-~~~iyv~gG~~-------------------------------~~~~ 173 (345)
.+-+.|..+.+ |+.. +--| ....+.. +..+|+..-.+ +...
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~p----d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNL----DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCC----CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred eEEEEECCCCeEEEEEEeCCCc----cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 78889998765 4321 1111 1111111 22222222111 1111
Q ss_pred CCceEEEEeCCCCceEe-CCCCCccCCCceeEE-EECC-EEEEEecCcceEEEEECCCCC-------------eeeccCC
Q 019186 174 SISQAEMYDPEKDVWVP-IPDLHRTHNSACTGV-VIGG-KVHVLHKGLSTVQVLDHMGLG-------------WTVEDYG 237 (345)
Q Consensus 174 ~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~-~~~~-~iyv~gG~~~~i~~yd~~~~~-------------W~~~~~~ 237 (345)
..+.+-+.|.++.+.+. +...|.+ ...+++. .-|| .+|+.+...+.+..||..+.+ -.++...
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG 330 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG 330 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC
T ss_pred EECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC
Confidence 23568889988733222 1223333 2233333 3344 577777688899999998652 1122111
Q ss_pred CC-CCceEEEcCeEEEEeC--cEEEEecCCc----------eEEeccchhhcccceeEEEEE-------CCeEEEEccee
Q 019186 238 WL-QGPMAIVHDSVYLMSH--GLIIKQHRDV----------RKVVASASEFRRRIGFAMIGM-------GDDIYVIGGVI 297 (345)
Q Consensus 238 ~~-~~~~~~~~~~l~~~~~--~~i~~~d~~~----------W~~~~~~p~~~~r~~~~~~~~-------~~~l~i~GG~~ 297 (345)
.. .+....-+|.+|+... +++..+|.+. ++.+..++. ....+|..... |..+|+.-+..
T Consensus 331 ~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV-~yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 331 LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV-HYQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC-SSCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec-ccccccceeccceEeCCCCCEEEEcCCCC
Confidence 11 2222223568888876 6666666544 666666652 11112333321 34566665544
Q ss_pred cCCCCcccccccCceeeeccCCCCCceeEcCCCCCcceeEEeeeee
Q 019186 298 GPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 343 (345)
Q Consensus 298 ~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~~r~~~~~~~~~ 343 (345)
....-...+..-..-..||++.+ +-..+.+.|..... |-++++
T Consensus 410 kdr~~~~gp~~~~~~ql~dis~~--~m~lv~d~p~~~eP-h~~~i~ 452 (595)
T 1fwx_A 410 KDRFLNVGPLKPENDQLIDISGD--KMVLVHDGPTFAEP-HDAIAV 452 (595)
T ss_dssp TTSSCCCCSSCCEEEEEEECSSS--SCEEEEEEEESSCC-CCEEEE
T ss_pred ccccccCCCCCCCcceEEEcCCC--cEEEEEEEcCCCCC-CceEEc
Confidence 33221111111123367899888 77778776654444 344444
No 254
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=89.72 E-value=10 Score=33.47 Aligned_cols=95 Identities=13% Similarity=0.058 Sum_probs=49.5
Q ss_pred CceEEEeCCCCCcccCCCCC-CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE
Q 019186 128 NEVWSYDPVTRQWSPRASML-VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV 205 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~ 205 (345)
..+.+||..+.+-...-..+ ....-.+++.. ++..++.|+.++ .+.+||..+.+....-.+... .....+
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~--~~v~~~ 263 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG------IIDIWDIRFNVLIRSWSFGDH--APITHV 263 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS------CEEEEETTTTEEEEEEBCTTC--EEEEEE
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC------eEEEEEcCCccEEEEEecCCC--CceEEE
Confidence 46889999876532211111 11111222222 566777776553 489999988654321111111 111111
Q ss_pred -E-----ECCEEEEEecCcceEEEEECCCCC
Q 019186 206 -V-----IGGKVHVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 206 -~-----~~~~iyv~gG~~~~i~~yd~~~~~ 230 (345)
. -++.+++.|+....+..||..+++
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 1 134566666666779999988665
No 255
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=89.58 E-value=6.8 Score=31.28 Aligned_cols=140 Identities=11% Similarity=0.011 Sum_probs=75.3
Q ss_pred EEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCccc--C----CCCCCCceeeeeeE-eCCeEEEEcCc
Q 019186 96 GVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSP--R----ASMLVPRAMFACCA-LKEKIVVAGGF 168 (345)
Q Consensus 96 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~--~----~~~~~~r~~~~~~~-~~~~iyv~gG~ 168 (345)
+++...|++|+|=|. .+|+++.....+.. + +.+|.. -.++... .++++|++-|.
T Consensus 28 Ai~~~~g~~y~Fkg~------------------~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iDAa~~~~~~~~iyfFkG~ 88 (207)
T 1pex_A 28 AITSLRGETMIFKDR------------------FFWRLHPQQVDAELFLTKSFWPELPNR-IDAAYEHPSHDLIFIFRGR 88 (207)
T ss_dssp EEEEETTEEEEEETT------------------EEEEECSSSSCCEEEEHHHHCTTSCSS-CCEEEEETTTTEEEEEETT
T ss_pred EEEeCCCcEEEEECC------------------EEEEEeCCCcCCCceehhHhccCCCCC-ccEEEEeccCCcEEEEccC
Confidence 455679999999764 57777664432211 0 223321 1222212 26899999773
Q ss_pred CCCCCCCceEEEEeCCCCce---EeCCC--CCccCCCceeEEE-E--CCEEEEEecCcceEEEEECCCCCeee-----c-
Q 019186 169 TSCRKSISQAEMYDPEKDVW---VPIPD--LHRTHNSACTGVV-I--GGKVHVLHKGLSTVQVLDHMGLGWTV-----E- 234 (345)
Q Consensus 169 ~~~~~~~~~v~~yd~~~~~W---~~~~~--~~~~~~~~~~~~~-~--~~~iyv~gG~~~~i~~yd~~~~~W~~-----~- 234 (345)
.+++|+..+-.- +.+.. +|.. ....-++. . ++++|++-| +..++||..+++-.. +
T Consensus 89 --------~~w~~~~~~~~~gyPk~I~~~GlP~~-~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~~~d~gyPr~i~ 157 (207)
T 1pex_A 89 --------KFWALNGYDILEGYPKKISELGLPKE-VKKISAAVHFEDTGKTLLFSG--NQVWRYDDTNHIMDKDYPRLIE 157 (207)
T ss_dssp --------EEEEESTTCCCTTCSEESTTTTCCTT-CCCCCEEEECTTTSEEEEEET--TEEEEEETTTTEECSSCCCBHH
T ss_pred --------EEEEEeCCeeccCCceeccccCCCCC-CccccEEEEeCCCCEEEEEeC--CEEEEEeCcCccccCCCCccHH
Confidence 367776432111 22322 2321 11222232 2 489999975 678999987543210 0
Q ss_pred ---cCCCC-CCceEEEcCeEEEEeCcEEEEecCCc
Q 019186 235 ---DYGWL-QGPMAIVHDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 235 ---~~~~~-~~~~~~~~~~l~~~~~~~i~~~d~~~ 265 (345)
+..+. ..++...+|.+|++.+...+.||..+
T Consensus 158 ~~~~Gip~~iDaAf~~~g~~YfFkg~~y~rf~~~~ 192 (207)
T 1pex_A 158 EDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWS 192 (207)
T ss_dssp HHSTTSCSCCSEEEEETTEEEEEETTEEEEEETTT
T ss_pred HcCCCCCCCccEEEEcCCcEEEEECCEEEEEeCCc
Confidence 01111 22333458889999888888888765
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=89.40 E-value=12 Score=33.65 Aligned_cols=145 Identities=9% Similarity=-0.016 Sum_probs=76.8
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CC-EEEEEcCCCCCCCCCCCCCCCCcCcCceEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AG-KLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (345)
++.||+.-.. ..+..+|+..++...+..... +. ..+++. ++ .||+....... ....+..
T Consensus 149 ~g~Lyv~d~~--~~I~~id~~~~~v~~~~~~~~----~P-~~ia~d~~G~~lyvad~~~~~------------~~~~v~~ 209 (430)
T 3tc9_A 149 HNHLYLVGEQ--HPTRLIDFEKEYVSTVYSGLS----KV-RTICWTHEADSMIITNDQNNN------------DRPNNYI 209 (430)
T ss_dssp EEEEEEEEBT--EEEEEEETTTTEEEEEECCCS----CE-EEEEECTTSSEEEEEECCSCT------------TSEEEEE
T ss_pred CCeEEEEeCC--CcEEEEECCCCEEEEEecCCC----Cc-ceEEEeCCCCEEEEEeCCCCc------------ccceEEE
Confidence 3667776543 788999999888776644211 11 233333 34 49988643211 1234566
Q ss_pred EeCCCCCcccCCCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--C
Q 019186 133 YDPVTRQWSPRASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G 208 (345)
Q Consensus 133 yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~ 208 (345)
++.. ..+.....+.....-+++++. ++.||+.--. ...+.+||+.+..-..+...+.. . ....+.+ +
T Consensus 210 ~~~~-g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~------~~~V~~~~~~~~~~~~~~~~~~~-~-~P~gia~~pd 280 (430)
T 3tc9_A 210 LTRE-SGFKVITELTKGQNCNGAETHPINGELYFNSWN------AGQVFRYDFTTQETTPLFTIQDS-G-WEFHIQFHPS 280 (430)
T ss_dssp EEGG-GTSCSEEEEEECSSCCCEEECTTTCCEEEEETT------TTEEEEEETTTTEEEEEEECSSS-S-CCEEEEECTT
T ss_pred EeCC-CceeeeeeeccCCCceEEEEeCCCCEEEEEECC------CCEEEEEECCCCcEEEEEEcCCC-C-cceeEEEcCC
Confidence 6653 334311111111122344443 6788887432 34699999987654333222221 1 1222333 4
Q ss_pred C-EEEEEecCcceEEEEECC
Q 019186 209 G-KVHVLHKGLSTVQVLDHM 227 (345)
Q Consensus 209 ~-~iyv~gG~~~~i~~yd~~ 227 (345)
+ .||+.....+.|++|+..
T Consensus 281 G~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 281 GNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEeCC
Confidence 4 499987667788887654
No 257
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=89.24 E-value=15 Score=34.82 Aligned_cols=195 Identities=10% Similarity=-0.064 Sum_probs=114.3
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPR 143 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~ 143 (345)
..++...|..+..-...-+++.- ..-.+++.. ++.||+.--. ...++++++.....+.+
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~---~~~~~l~~d~~~~~lywtD~~----------------~~~I~r~~~~g~~~~~v 74 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGV---KEASALDFDVTDNRIYWTDIS----------------LKTISRAFMNGSALEHV 74 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSC---SCEEEEEEETTTTEEEEEETT----------------TTEEEEEETTSCSCEEE
T ss_pred CCcEEEEECCCCCcceEEEcCCC---CceEEEEEECCCCEEEEEECC----------------CCeEEEEECCCCCcEEE
Confidence 46788888877654433333321 233455554 5889998642 35788898876554443
Q ss_pred CCCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeC--CCCCccCCCceeEEEE--CCEEEEEe-c
Q 019186 144 ASMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPI--PDLHRTHNSACTGVVI--GGKVHVLH-K 216 (345)
Q Consensus 144 ~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~--~~~~~~~~~~~~~~~~--~~~iyv~g-G 216 (345)
..... ..-.++++ .+++||+.-.. ...++++++....=+.+ ..+..+ .++++. ++.||+.. |
T Consensus 75 ~~~g~-~~P~GlAvD~~~~~LY~tD~~------~~~I~v~~~dG~~~~~l~~~~l~~P----~~iavdp~~G~lY~tD~g 143 (628)
T 4a0p_A 75 VEFGL-DYPEGMAVDWLGKNLYWADTG------TNRIEVSKLDGQHRQVLVWKDLDSP----RALALDPAEGFMYWTEWG 143 (628)
T ss_dssp ECSSC-SCCCEEEEETTTTEEEEEETT------TTEEEEEETTSTTCEEEECSSCCCE----EEEEEETTTTEEEEEECS
T ss_pred EeCCC-CCcceEEEEeCCCEEEEEECC------CCEEEEEecCCCcEEEEEeCCCCCc----ccEEEccCCCeEEEeCCC
Confidence 22111 11224444 47899998432 35799999875532222 222222 334444 68999986 4
Q ss_pred CcceEEEEECCCCCeeeccCCCC-CCceEEE--cCeEEEEeC--cEEEEecCCc-eEE-eccchhhcccceeEEEEECCe
Q 019186 217 GLSTVQVLDHMGLGWTVEDYGWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV-RKV-VASASEFRRRIGFAMIGMGDD 289 (345)
Q Consensus 217 ~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~~--~~~l~~~~~--~~i~~~d~~~-W~~-~~~~p~~~~r~~~~~~~~~~~ 289 (345)
....|+++++....-+.+..... +..+++- +++||..+. ..|..+|.+. -.+ +.. ......+++..++.
T Consensus 144 ~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~----~l~~P~glav~~~~ 219 (628)
T 4a0p_A 144 GKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD----DLPHPFGLTQYQDY 219 (628)
T ss_dssp SSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE----CCSCEEEEEEETTE
T ss_pred CCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeec----cCCCceEEEEECCE
Confidence 46789999987665544332222 3334433 589999987 7888888765 222 211 12234678888889
Q ss_pred EEEEc
Q 019186 290 IYVIG 294 (345)
Q Consensus 290 l~i~G 294 (345)
||+.-
T Consensus 220 ly~tD 224 (628)
T 4a0p_A 220 IYWTD 224 (628)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 98873
No 258
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.05 E-value=13 Score=33.70 Aligned_cols=135 Identities=8% Similarity=-0.003 Sum_probs=73.0
Q ss_pred EEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCC---------CCcccCCCCCCCceeeeeeE-eCCeEEEE
Q 019186 96 GVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVT---------RQWSPRASMLVPRAMFACCA-LKEKIVVA 165 (345)
Q Consensus 96 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t---------~~W~~~~~~~~~r~~~~~~~-~~~~iyv~ 165 (345)
+++...|++|+|-|. .+|+++... ..|..++. . -..+... .++++|++
T Consensus 267 Ai~~~~ge~y~Fkg~------------------~~wr~~~~~~~~~p~~I~~~Wp~LP~---~-iDAa~~~~~~g~~~fF 324 (450)
T 1su3_A 267 AITTIRGEVMFFKDR------------------FYMRTNPFYPEVELNFISVFWPQLPN---G-LEAAYEFADRDEVRFF 324 (450)
T ss_dssp EEEEETTEEEEEETT------------------EEEECCTTSSSCEEEEGGGTCTTSCS---S-CCEEEEEGGGTEEEEE
T ss_pred eEEecCCeEEEEeCC------------------EEEEEcCCCCcccceehhHhccCCCC---C-eeEEEEEcCCCeEEEE
Confidence 456689999999874 355555433 33444432 1 1111111 37899999
Q ss_pred cCcCCCCCCCceEEEEeCCCC--ce-------EeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeee-
Q 019186 166 GGFTSCRKSISQAEMYDPEKD--VW-------VPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTV- 233 (345)
Q Consensus 166 gG~~~~~~~~~~v~~yd~~~~--~W-------~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~- 233 (345)
-|. .+++|+..+- .+ ..++.++.. .- +++.. ++++|++-| +..++||..+++-..
T Consensus 325 Kg~--------~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~--ID-AA~~~~~~~k~yfFkG--~~yw~yd~~~~~~~~g 391 (450)
T 1su3_A 325 KGN--------KYWAVQGQNVLHGYPKDIYSSFGFPRTVKH--ID-AALSEENTGKTYFFVA--NKYWRYDEYKRSMDPG 391 (450)
T ss_dssp ETT--------EEEEEETTEECTTCSEEHHHHHCCCTTCCC--CC-EEEEETTTTEEEEEET--TEEEEEETTTTEECSS
T ss_pred eCC--------EEEEecCCcccCCCceeeehhhcCCCCCCc--cc-eEEEEcCCCeEEEEeC--CEEEEEeCCCccccCC
Confidence 763 3677764321 00 011222211 11 22333 689999975 678999876542211
Q ss_pred ----cc----CCCC-CCceEEEcCeEEEEeCcEEEEecCCc
Q 019186 234 ----ED----YGWL-QGPMAIVHDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 234 ----~~----~~~~-~~~~~~~~~~l~~~~~~~i~~~d~~~ 265 (345)
+. ..+. .-++...++++|++.+...+.||..+
T Consensus 392 YPk~I~~~fpgip~~iDAA~~~~g~~YFFkg~~ywr~d~~~ 432 (450)
T 1su3_A 392 YPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDPKT 432 (450)
T ss_dssp CSEEHHHHSTTSCSCCSEEEEETTEEEEEETTEEEEEETTT
T ss_pred CCcchhhcCCCCCCCccEEEEcCCeEEEEeCCEEEEEECCc
Confidence 11 1111 22333467888888888888888765
No 259
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=88.65 E-value=12 Score=33.02 Aligned_cols=60 Identities=8% Similarity=0.099 Sum_probs=40.2
Q ss_pred cCeEEEEe-----------CcEEEEecCCceEEeccchhhcccceeEEEE-ECCe--EEEEcceecCCCCcccccccCce
Q 019186 247 HDSVYLMS-----------HGLIIKQHRDVRKVVASASEFRRRIGFAMIG-MGDD--IYVIGGVIGPDRWNWDIKPMSDV 312 (345)
Q Consensus 247 ~~~l~~~~-----------~~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~-~~~~--l~i~GG~~~~~~~~~~~~~~~~v 312 (345)
++++|+.. ++.++.+|.++++.+..++. .....+++. -+++ +|+.-+ .-++|
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v--g~~~~~lavs~D~~~~ly~tn~------------~~~~V 356 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM--GHEIDSINVSQDEKPLLYALST------------GDKTL 356 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECSSSSCEEEEEET------------TTTEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC--CCCcceEEECCCCCeEEEEEcC------------CCCeE
Confidence 57899964 26899999999888888773 333334443 3554 555432 11478
Q ss_pred eeeccCCC
Q 019186 313 DVLTVGAE 320 (345)
Q Consensus 313 ~~yd~~~~ 320 (345)
.+||..++
T Consensus 357 sViD~~t~ 364 (386)
T 3sjl_D 357 YIHDAESG 364 (386)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 99999887
No 260
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.58 E-value=18 Score=34.70 Aligned_cols=241 Identities=7% Similarity=-0.092 Sum_probs=117.4
Q ss_pred CcEEEEEec---CCCCeEEEEeCCCCCEEeCCCCCcc-ccc-cceeEEEE-ECCEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAF---DPENLWQLYDPLRDLWITLPVLPSK-IRH-LAHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg---~~~~~~~~yd~~~~~W~~~~~~~~~-~~~-~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
+..+|..-. .....++..+...++|+.+-....- ... ....+.+. -+|+.++++...... ...
T Consensus 83 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~-----------~~~ 151 (710)
T 2xdw_A 83 GKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGS-----------DWV 151 (710)
T ss_dssp TTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTC-----------SCE
T ss_pred CCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCC-----------ceE
Confidence 556665532 3345778888877778765322210 000 11112222 266665555332111 134
Q ss_pred ceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCC----------CCCCceEEEEeCCCCceE--eCCCCC
Q 019186 129 EVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSC----------RKSISQAEMYDPEKDVWV--PIPDLH 195 (345)
Q Consensus 129 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~----------~~~~~~v~~yd~~~~~W~--~~~~~~ 195 (345)
+++++|..+++...... .... ....+.. +++.++++..... ......++.++..+.+-. .+...+
T Consensus 152 ~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp EEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC
Confidence 79999999987654311 1111 1223333 5544444332211 022456888898887632 221112
Q ss_pred c-cCCCceeEEEECCE-EEEEec----CcceEEEEECCC------C--CeeeccCCCCCC--ceEEEcCeEEEEeC----
Q 019186 196 R-THNSACTGVVIGGK-VHVLHK----GLSTVQVLDHMG------L--GWTVEDYGWLQG--PMAIVHDSVYLMSH---- 255 (345)
Q Consensus 196 ~-~~~~~~~~~~~~~~-iyv~gG----~~~~i~~yd~~~------~--~W~~~~~~~~~~--~~~~~~~~l~~~~~---- 255 (345)
. ..........-+++ |++... ..+.++.+|+.+ . .+..+....... ...--++.||+.+.
T Consensus 230 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~ 309 (710)
T 2xdw_A 230 DEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSP 309 (710)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCT
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCC
Confidence 1 20111122233555 444332 156889999876 4 577665433211 12223567777765
Q ss_pred -cEEEEecCCc-----eEEeccchhhcccceeEEEEE-CCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 256 -GLIIKQHRDV-----RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 256 -~~i~~~d~~~-----W~~~~~~p~~~~r~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
..++.+|.++ |+.+..-. ....-..+... ++++++....++. ..++++|+.++
T Consensus 310 ~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~lv~~~~~~g~----------~~l~~~~~~~g 369 (710)
T 2xdw_A 310 NYRLINIDFTDPEESKWKVLVPEH--EKDVLEWVACVRSNFLVLCYLHDVK----------NTLQLHDLATG 369 (710)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCC--SSCEEEEEEEETTTEEEEEEEETTE----------EEEEEEETTTC
T ss_pred CCEEEEEeCCCCCcccceeccCCC--CCCeEEEEEEEcCCEEEEEEEECCE----------EEEEEEECCCC
Confidence 4688888653 67664321 11122234444 6677766554332 35778887544
No 261
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=88.55 E-value=15 Score=37.11 Aligned_cols=141 Identities=12% Similarity=-0.022 Sum_probs=74.0
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceE-EEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVW-SYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~-~yd~~t~~W~~~~ 144 (345)
...++.++..+++...+...+.. ....++..+++.+++++. ...++ ++|..+++-..+.
T Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~sdg~~l~~~s~----------------~~~l~~~~d~~~~~~~~l~ 375 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLKVPEPLRI----RYVRRGGDTKVAFIHGTR----------------EGDFLGIYDYRTGKAEKFE 375 (1045)
T ss_dssp TTEEEEECTTSSBEEECSCCSCE----EEEEECSSSEEEEEEEET----------------TEEEEEEEETTTCCEEECC
T ss_pred cCEEEEEcCCCCceEEccCCCcc----eEEeeeEcCCCeEEEEEC----------------CCceEEEEECCCCCceEec
Confidence 45788888887776655432220 111111125554444432 23688 8999887655554
Q ss_pred CCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEecC------
Q 019186 145 SMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKG------ 217 (345)
Q Consensus 145 ~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~------ 217 (345)
........++.. +++.++++... ..+.++|.++.+-..+..-... ........-+++.+++++.
T Consensus 376 --~~~~~~~~~~~SpDG~~la~~~~~------~~v~~~d~~tg~~~~~~~~~~~-~v~~~~~SpDG~~la~~~~~~~~~~ 446 (1045)
T 1k32_A 376 --ENLGNVFAMGVDRNGKFAVVANDR------FEIMTVDLETGKPTVIERSREA-MITDFTISDNSRFIAYGFPLKHGET 446 (1045)
T ss_dssp --CCCCSEEEEEECTTSSEEEEEETT------SEEEEEETTTCCEEEEEECSSS-CCCCEEECTTSCEEEEEEEECSSTT
T ss_pred --CCccceeeeEECCCCCEEEEECCC------CeEEEEECCCCceEEeccCCCC-CccceEECCCCCeEEEEecCccccc
Confidence 111112222222 56655555432 3689999998876554311111 1122223336664444432
Q ss_pred ----cceEEEEECCCCCeeecc
Q 019186 218 ----LSTVQVLDHMGLGWTVED 235 (345)
Q Consensus 218 ----~~~i~~yd~~~~~W~~~~ 235 (345)
...++.+|..+++...+.
T Consensus 447 ~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 447 DGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp CSCCEEEEEEEETTTTEEEECS
T ss_pred cCCCCCeEEEEECCCCcEEEee
Confidence 247899999887755554
No 262
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=88.27 E-value=11 Score=32.04 Aligned_cols=151 Identities=11% Similarity=0.026 Sum_probs=73.2
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEE-ECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.+++.. ...++.||+.+++.+.+...+.......-..++. -+|++|+....... ......++++
T Consensus 100 dg~l~v~~---~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~----------~~~~~~l~~~ 166 (326)
T 2ghs_A 100 DSKQLIAS---DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA----------ETGAGSIYHV 166 (326)
T ss_dssp TTEEEEEE---TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC----------CTTCEEEEEE
T ss_pred CCeEEEEE---CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC----------CCCceEEEEE
Confidence 44555543 3468999999998876644322100011122333 36778775421110 0124578999
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCC--CC-ceE---eCCCCCccCCCceeEE
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPE--KD-VWV---PIPDLHRTHNSACTGV 205 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~--~~-~W~---~~~~~~~~~~~~~~~~ 205 (345)
+ +++.+.+.. ......+++.. ++ .+|+.... ...+++||.. +. ... .+..+... ......+
T Consensus 167 ~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~-~~~p~gi 235 (326)
T 2ghs_A 167 A--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK------VNRLMRVPLDARTGLPTGKAEVFIDSTGI-KGGMDGS 235 (326)
T ss_dssp E--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT------TCEEEEEEBCTTTCCBSSCCEEEEECTTS-SSEEEEE
T ss_pred e--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC------CCEEEEEEcccccCCcccCceEEEECCCC-CCCCCee
Confidence 8 455443311 00111233333 44 57776432 2468899875 43 211 11111111 1122334
Q ss_pred EE--CCEEEEEecCcceEEEEECCCC
Q 019186 206 VI--GGKVHVLHKGLSTVQVLDHMGL 229 (345)
Q Consensus 206 ~~--~~~iyv~gG~~~~i~~yd~~~~ 229 (345)
.. ++.+|+.......+.+||+...
T Consensus 236 ~~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 236 VCDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp EECTTSCEEEEEETTTEEEEECTTCC
T ss_pred EECCCCCEEEEEeCCCEEEEECCCCC
Confidence 44 5678887533467999998543
No 263
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=87.45 E-value=0.16 Score=47.89 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=31.0
Q ss_pred CCCChHHHHHHhhccC-CCcchhhHHHhhHHHHHh
Q 019186 5 IEGLPDAVALRCLARV-PFFLHPKLELVSRSWRAA 38 (345)
Q Consensus 5 ~~~lp~~~~~~~l~~~-p~~~~~~~~~~~~~w~~~ 38 (345)
...||||++.+|+.++ +.....+...||++|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3479999999999999 889999999999999876
No 264
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=87.42 E-value=3.7 Score=38.32 Aligned_cols=170 Identities=12% Similarity=-0.006 Sum_probs=88.8
Q ss_pred eEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCC
Q 019186 68 LWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASML 147 (345)
Q Consensus 68 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~ 147 (345)
...+||..+++...+...+ . .....+-+|+.+++++.... ...+++++|+.+++.+.+....
T Consensus 133 ~~~l~d~~~g~~~~l~~~~-----~-~~~~~spDG~~la~~~~~~~------------~~~~i~~~d~~~g~~~~l~~~~ 194 (582)
T 3o4h_A 133 RVALYALDGGGLRELARLP-----G-FGFVSDIRGDLIAGLGFFGG------------GRVSLFTSNLSSGGLRVFDSGE 194 (582)
T ss_dssp CEEEEEEETTEEEEEEEES-----S-CEEEEEEETTEEEEEEEEET------------TEEEEEEEETTTCCCEEECCSS
T ss_pred CceEEEccCCcEEEeecCC-----C-ceEEECCCCCEEEEEEEcCC------------CCeEEEEEcCCCCCceEeecCC
Confidence 3448888888766554221 1 11223346666665543211 1246999999998887664332
Q ss_pred CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCcee-------EEEECCEEEEEecCcc
Q 019186 148 VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACT-------GVVIGGKVHVLHKGLS 219 (345)
Q Consensus 148 ~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~-------~~~~~~~iyv~gG~~~ 219 (345)
.. ....+.. +|+.++.+... ....++++|.++.+.+.+...... ....+ ...-++.+++.+....
T Consensus 195 ~~--~~~~~~SpDG~~l~~~~~~----~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 195 GS--FSSASISPGMKVTAGLETA----REARLVTVDPRDGSVEDLELPSKD-FSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CE--EEEEEECTTSCEEEEEECS----SCEEEEEECTTTCCEEECCCSCSH-HHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred Cc--cccceECCCCCEEEEccCC----CeeEEEEEcCCCCcEEEccCCCcC-hhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 21 1222222 56554432221 135799999999887743332211 11111 0334667777665445
Q ss_pred eEEEEECCCCCeeeccCCCCCCceEEEcCeEEEEeC-----cEEEEecCCc
Q 019186 220 TVQVLDHMGLGWTVEDYGWLQGPMAIVHDSVYLMSH-----GLIIKQHRDV 265 (345)
Q Consensus 220 ~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~l~~~~~-----~~i~~~d~~~ 265 (345)
.+..|+. ++....... ....++..++++++... ..++.+|.+.
T Consensus 268 ~~~l~~~--g~~~~~~~~-~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 268 RSAVFID--GERVEAPQG-NHGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEET--TEEECCCSS-EEEEEEEETTEEEEEEEETTEEEEEEEETTCC
T ss_pred cEEEEEE--CCeeccCCC-ceEEEEecCCEEEEEEcCCCCCCeEEEEcCCC
Confidence 6777777 443322111 11122223777766544 5788888764
No 265
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=86.68 E-value=22 Score=33.75 Aligned_cols=139 Identities=9% Similarity=-0.021 Sum_probs=68.7
Q ss_pred CceEEEEeCCCCceEeCCCCCccCCCceeEEE--ECCE-EEEEec----CcceEEEEECCCC-CeeeccCCCC------C
Q 019186 175 ISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGK-VHVLHK----GLSTVQVLDHMGL-GWTVEDYGWL------Q 240 (345)
Q Consensus 175 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~~-iyv~gG----~~~~i~~yd~~~~-~W~~~~~~~~------~ 240 (345)
...+.++|.++.+-..+...... ......+. -+++ |++... ....+..+|+.++ ....+..... .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 35789999998876555432111 11222222 2555 554332 2347899999887 6654421100 0
Q ss_pred CceEE-E--cCeEEEEeC----cEEEEecCCc--eEEeccchhhcccceeEEEEE--CC-eEEEEcceecCCCCcccccc
Q 019186 241 GPMAI-V--HDSVYLMSH----GLIIKQHRDV--RKVVASASEFRRRIGFAMIGM--GD-DIYVIGGVIGPDRWNWDIKP 308 (345)
Q Consensus 241 ~~~~~-~--~~~l~~~~~----~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~--~~-~l~i~GG~~~~~~~~~~~~~ 308 (345)
..++. . +|+++..+. ..++.++.+. .+.+..-. ........+ ++ .|++.+..+.. .
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~----~~v~~~~~~spdg~~l~~~~~~~~~--------~ 380 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE----WEVTNFAGFDPKGTRLYFESTEASP--------L 380 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS----SCEEEEEEECTTSSEEEEEESSSCT--------T
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC----eEEEeeeEEcCCCCEEEEEecCCCC--------c
Confidence 12222 3 677665553 5788887443 44443211 111121223 44 45555443221 1
Q ss_pred cCceeeeccCCCCCceeEcC
Q 019186 309 MSDVDVLTVGAERPTWRQVS 328 (345)
Q Consensus 309 ~~~v~~yd~~~~~~~W~~v~ 328 (345)
...++.+|..+. +..++.
T Consensus 381 ~~~l~~~d~~~~--~~~~l~ 398 (706)
T 2z3z_A 381 ERHFYCIDIKGG--KTKDLT 398 (706)
T ss_dssp CBEEEEEETTCC--CCEESC
T ss_pred eEEEEEEEcCCC--Cceecc
Confidence 236777887776 555554
No 266
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=86.60 E-value=10 Score=29.90 Aligned_cols=143 Identities=13% Similarity=0.036 Sum_probs=76.4
Q ss_pred EEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCC----------CcccCCCCCCCceeeeeeEeCCeEEEEc
Q 019186 97 VVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR----------QWSPRASMLVPRAMFACCALKEKIVVAG 166 (345)
Q Consensus 97 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~----------~W~~~~~~~~~r~~~~~~~~~~~iyv~g 166 (345)
++...+++|+|-|. .+|+++...- .|.. +|.. -.++....++++|++-
T Consensus 11 ~~~~~g~~~fFkg~------------------~~w~~~~~~~~~gyP~~I~~~w~g---lP~~-iDAa~~~~~g~~yfFk 68 (196)
T 3c7x_A 11 VAMLRGEMFVFKER------------------WFWRVRNNQVMDGYPMPIGQFWRG---LPAS-INTAYERKDGKFVFFK 68 (196)
T ss_dssp EEEETTEEEEEETT------------------EEEEEETTEECTTCSEEHHHHSTT---CCSS-CCEEEECTTSCEEEEE
T ss_pred EEEcCCEEEEEECC------------------EEEEEECCccCCCCceEhhHhccC---CCCC-ccEEEEeCCCcEEEec
Confidence 44678999999874 5777754321 1222 3321 1222222478899997
Q ss_pred CcCCCCCCCceEEEEeCCCCce---EeCCC----CCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeee----
Q 019186 167 GFTSCRKSISQAEMYDPEKDVW---VPIPD----LHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTV---- 233 (345)
Q Consensus 167 G~~~~~~~~~~v~~yd~~~~~W---~~~~~----~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~---- 233 (345)
|. ..+.|+..+... +.+.. +|.. ..- ++... ++++|++-| +..++||..+++-..
T Consensus 69 g~--------~yw~~~~~~~~~gyPk~I~~~~~glP~~-~ID-AA~~~~~~g~~yfFkG--~~yw~yd~~~~~v~~gyPk 136 (196)
T 3c7x_A 69 GD--------KHWVFDEASLEPGYPKHIKELGRGLPTD-KID-AALFWMPNGKTYFFRG--NKYYRFNEELRAVDSEYPK 136 (196)
T ss_dssp TT--------EEEEEETTEECTTCSEEGGGTCBSCCSS-CCS-EEEEETTTTEEEEEET--TEEEEEETTTTEECTTCSE
T ss_pred CC--------EEEEEeCCcccCCCCeEhhhcCCCCCCC-ccc-EEEEEccCCEEEEEEC--CEEEEEeCCcccccCCCCc
Confidence 63 368887542110 11211 3311 112 23332 689999975 567899986643211
Q ss_pred -cc---CCCCCCceEE-E-cC-eEEEEeCcEEEEecCCceEEeccch
Q 019186 234 -ED---YGWLQGPMAI-V-HD-SVYLMSHGLIIKQHRDVRKVVASAS 273 (345)
Q Consensus 234 -~~---~~~~~~~~~~-~-~~-~l~~~~~~~i~~~d~~~W~~~~~~p 273 (345)
+. ..+...-++. . ++ .+|++.+..-+.||..+-+.....|
T Consensus 137 ~i~~~~gip~~idaAf~~~~~~~~YfFkg~~y~r~d~~~~~v~~~yp 183 (196)
T 3c7x_A 137 NIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEPGYP 183 (196)
T ss_dssp EGGGSBTCCSSCSEEEECTTSSEEEEEETTEEEEEETTTTEECTTCC
T ss_pred cHHHCCCcCCCcceeEEecCCCEEEEEECCEEEEEECCcceeccCCc
Confidence 11 1111222222 2 44 8999999999999987633333333
No 267
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=86.49 E-value=8.1 Score=33.96 Aligned_cols=240 Identities=11% Similarity=0.006 Sum_probs=120.6
Q ss_pred CCCcEEEEEec--------CCCCeEEEEeCCCCCEEeCCCCCccc----cccceeEEEEECC-EEEEEcCCCCCCCCCCC
Q 019186 53 SSENLLCVCAF--------DPENLWQLYDPLRDLWITLPVLPSKI----RHLAHFGVVSTAG-KLFVLGGGSDAVDPLTG 119 (345)
Q Consensus 53 ~~~~~l~v~gg--------~~~~~~~~yd~~~~~W~~~~~~~~~~----~~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~ 119 (345)
..+..+|+... ...+.+.++|+.+.+=..--+++... ....+.-...-++ .+||.--.
T Consensus 74 pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~--------- 144 (368)
T 1mda_H 74 HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG--------- 144 (368)
T ss_dssp TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS---------
T ss_pred CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC---------
Confidence 34778888752 23467899999988632211122000 0012222233344 58877311
Q ss_pred CCCCCcCcCceEE--EeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCC-----CceEeC-
Q 019186 120 DQDGSFATNEVWS--YDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEK-----DVWVPI- 191 (345)
Q Consensus 120 ~~~~~~~~~~~~~--yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~-----~~W~~~- 191 (345)
..+.+.+ +|+.+ -..+ +.+.. ..+...+...|+....+ ..+..+|.++ ++....
T Consensus 145 ------~~~~v~V~~iD~~t--v~~i---~v~~~-~~~~p~g~~~~~~~~~d------g~~~~vd~~~~~~~~~~v~~~~ 206 (368)
T 1mda_H 145 ------SSAAAGLSVPGASD--DQLT---KSASC-FHIHPGAAATHYLGSCP------ASLAASDLAAAPAAAGIVGAQC 206 (368)
T ss_dssp ------SSCEEEEEETTTEE--EEEE---ECSSC-CCCEEEETTEEECCCCT------TSCEEEECCSSCCCCEECCCCS
T ss_pred ------CCCeEEEEEEchhh--ceEE---ECCCc-eEEccCCCeEEEEEcCC------CCEEEEECccccccCCeEEEEe
Confidence 1245666 78876 1222 22111 11223344555533222 2356677775 222110
Q ss_pred -CCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCC------eeecc-----CCCC--CCc-eEEE--cCeEEEE-
Q 019186 192 -PDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLG------WTVED-----YGWL--QGP-MAIV--HDSVYLM- 253 (345)
Q Consensus 192 -~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~------W~~~~-----~~~~--~~~-~~~~--~~~l~~~- 253 (345)
...+.. .... ....++.+|++. . +.+...|..++. |.... .... ... ++.- ++++|+.
T Consensus 207 t~~i~vg-~~P~-~~~~~~~~~~vs-~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~ 282 (368)
T 1mda_H 207 TGAQNCS-SQAA-QANYPGMLVWAV-A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT 282 (368)
T ss_dssp CTTSCBC-SCCE-EETTTTEEEECB-S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred eeeeeCC-CCcc-ccccCCEEEEEc-C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEe
Confidence 111211 1111 223355666665 3 778888886532 32211 0001 111 2222 4578874
Q ss_pred e---C------cEEEEecCCceEEeccchhhcccceeEEEEE-CCe-EEEEcceecCCCCcccccccCceeeeccCCCCC
Q 019186 254 S---H------GLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GDD-IYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERP 322 (345)
Q Consensus 254 ~---~------~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~-~~~-l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~ 322 (345)
. + ..+..+|..+.+.+..++ .....++++.- +++ +|+..+... ++|-++|..+
T Consensus 283 ~~~~~~~~~~~~~~~ViD~~t~~vv~~i~--vg~~p~gi~~s~Dg~~l~va~~~~~-----------~~VsVID~~t--- 346 (368)
T 1mda_H 283 VEHSRSCLAAAENTSSVTASVGQTSGPIS--NGHDSDAIIAAQDGASDNYANSAGT-----------EVLDIYDAAS--- 346 (368)
T ss_dssp EECSSCTTSCEEEEEEEESSSCCEEECCE--EEEEECEEEECCSSSCEEEEEETTT-----------TEEEEEESSS---
T ss_pred ccccCcccccCCCEEEEECCCCeEEEEEE--CCCCcceEEECCCCCEEEEEccCCC-----------CeEEEEECCC---
Confidence 3 2 366699999988888887 33345566544 444 777654212 3788999884
Q ss_pred ceeEcCCCCCcceeEEeee
Q 019186 323 TWRQVSPMTRCRGTILGCT 341 (345)
Q Consensus 323 ~W~~v~~~~~~r~~~~~~~ 341 (345)
|+.+..++..+.. .+.+
T Consensus 347 -~kvv~~I~vg~~P-~~i~ 363 (368)
T 1mda_H 347 -DQDQSSVELDKGP-ESLS 363 (368)
T ss_dssp -CEEEEECCCCSCC-CEEE
T ss_pred -CcEEEEEECCCCC-CEEE
Confidence 6677777777666 4544
No 268
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=85.40 E-value=21 Score=32.31 Aligned_cols=73 Identities=11% Similarity=0.138 Sum_probs=37.7
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCE--EeCCCC-Cccc----c-ccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcC
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLW--ITLPVL-PSKI----R-HLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFA 126 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W--~~~~~~-~~~~----~-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~ 126 (345)
+..+|+-| ...+.++++|..++-- +..... |..+ . .+.|+..+.-++ |||..-.....+ .
T Consensus 95 r~~l~v~~-l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~----------~ 162 (462)
T 2ece_A 95 RRFLIVPG-LRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGE----------G 162 (462)
T ss_dssp SCEEEEEB-TTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSC----------S
T ss_pred CCEEEEcc-CCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCC----------C
Confidence 55666655 4558899999876621 111111 0000 0 133333344455 887332211111 3
Q ss_pred cCceEEEeCCCCC
Q 019186 127 TNEVWSYDPVTRQ 139 (345)
Q Consensus 127 ~~~~~~yd~~t~~ 139 (345)
...+.++|..|.+
T Consensus 163 ~g~v~vlD~~T~~ 175 (462)
T 2ece_A 163 PGGILMLDHYSFE 175 (462)
T ss_dssp CCEEEEECTTTCC
T ss_pred CCeEEEEECCCCe
Confidence 5689999999876
No 269
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=84.50 E-value=26 Score=32.71 Aligned_cols=181 Identities=9% Similarity=0.061 Sum_probs=87.4
Q ss_pred EEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCC
Q 019186 58 LCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPV 136 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~ 136 (345)
.++.|+. ...+.+||..+.+.. ..+... ...-.+++.. ++++++.|+.+ ..+.+||..
T Consensus 162 ~l~s~s~-D~~v~lwd~~~~~~~--~~l~~H--~~~V~~v~fspdg~~las~s~D----------------~~i~lwd~~ 220 (611)
T 1nr0_A 162 RIISGSD-DNTVAIFEGPPFKFK--STFGEH--TKFVHSVRYNPDGSLFASTGGD----------------GTIVLYNGV 220 (611)
T ss_dssp EEEEEET-TSCEEEEETTTBEEE--EEECCC--SSCEEEEEECTTSSEEEEEETT----------------SCEEEEETT
T ss_pred EEEEEeC-CCeEEEEECCCCeEe--eeeccc--cCceEEEEECCCCCEEEEEECC----------------CcEEEEECC
Confidence 3444443 356778887654332 222211 0122234433 56777777652 468889987
Q ss_pred CCCcccCC-C--C---CCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECC
Q 019186 137 TRQWSPRA-S--M---LVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGG 209 (345)
Q Consensus 137 t~~W~~~~-~--~---~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 209 (345)
+++-...- . + .....-.+++.. ++..++.|+.+ ..+.+||..+.+....-............+..++
T Consensus 221 ~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D------~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (611)
T 1nr0_A 221 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD------KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK 294 (611)
T ss_dssp TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECS
T ss_pred CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC------CeEEEEeCCCCceeeeecCCCCccceeEEEEEcC
Confidence 76532211 1 0 111111222322 56666766654 3589999988765432111111011122233466
Q ss_pred EEEEEecCcceEEEEECCCCCeeeccCCCC-C-CceEE-EcCeEEEEeC--cEEEEecCCc
Q 019186 210 KVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-Q-GPMAI-VHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 210 ~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~-~-~~~~~-~~~~l~~~~~--~~i~~~d~~~ 265 (345)
..++.++....+..+|+.+.+-...-.... . ..++. .+++.++.++ +.+..+|..+
T Consensus 295 ~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 295 QALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp SCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 666666566778888887664322111100 0 11111 2455444443 6777777665
No 270
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.77 E-value=27 Score=32.26 Aligned_cols=134 Identities=9% Similarity=-0.085 Sum_probs=67.4
Q ss_pred CceEEEEeC--CCCceEeCCCCCccCCCceeEEEECC-EEEEEecCcceEEEEECCCCCeeeccCCCCCCceEEEcCeEE
Q 019186 175 ISQAEMYDP--EKDVWVPIPDLHRTHNSACTGVVIGG-KVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIVHDSVY 251 (345)
Q Consensus 175 ~~~v~~yd~--~~~~W~~~~~~~~~~~~~~~~~~~~~-~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~l~ 251 (345)
...++..+. ....- .+...... . ......++ .++++.+....+..||+.+++-..+...+........+|+..
T Consensus 89 ~~~l~~~~~~~~g~~~-~l~~~~~~-~--~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~l 164 (582)
T 3o4h_A 89 QHALFKVNTSRPGEEQ-RLEAVKPM-R--ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLI 164 (582)
T ss_dssp CEEEEEEETTSTTCCE-ECTTSCSB-E--EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEE
T ss_pred ceEEEEEeccCCCccc-cccCCCCc-e--eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEE
Confidence 345666776 33322 33322222 1 22344454 455554444555688988887665543322222333577665
Q ss_pred EEeC------cEEEEecCCc--eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCc
Q 019186 252 LMSH------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPT 323 (345)
Q Consensus 252 ~~~~------~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~ 323 (345)
++.. ..++.+|.++ .+.+...+ .........-+++.++.+..++ ...+++||++++ +
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~~~~l~~~~---~~~~~~~~SpDG~~l~~~~~~~----------~~~i~~~d~~~~--~ 229 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGGLRVFDSGE---GSFSSASISPGMKVTAGLETAR----------EARLVTVDPRDG--S 229 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCCCEEECCSS---CEEEEEEECTTSCEEEEEECSS----------CEEEEEECTTTC--C
T ss_pred EEEEEcCCCCeEEEEEcCCCCCceEeecCC---CccccceECCCCCEEEEccCCC----------eeEEEEEcCCCC--c
Confidence 5433 4688888765 66554322 1111212223666555332221 136889999887 5
Q ss_pred eeEc
Q 019186 324 WRQV 327 (345)
Q Consensus 324 W~~v 327 (345)
...+
T Consensus 230 ~~~~ 233 (582)
T 3o4h_A 230 VEDL 233 (582)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5533
No 271
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=83.70 E-value=21 Score=30.86 Aligned_cols=171 Identities=7% Similarity=-0.071 Sum_probs=84.9
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccC-CCceeEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTH-NSACTGV 205 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~-~~~~~~~ 205 (345)
..+.++|+.+.+-..... ....-.+++.. ++++++.++. ..+.+++..+..-.......... .......
T Consensus 157 ~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTDFDKNWSLSKINF 227 (365)
T ss_dssp CEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECCCCTTEEEEEEEE
T ss_pred CEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeecCCCCCCEEEEEE
Confidence 468889998776432211 11111223332 5666666542 23677777766543221111110 1111223
Q ss_pred EECCEEEEEec----CcceEEEEECCCCCeeecc-----CCCCC-Cce-EEEcCeEEEEeC--cEEEEecCCceEEeccc
Q 019186 206 VIGGKVHVLHK----GLSTVQVLDHMGLGWTVED-----YGWLQ-GPM-AIVHDSVYLMSH--GLIIKQHRDVRKVVASA 272 (345)
Q Consensus 206 ~~~~~iyv~gG----~~~~i~~yd~~~~~W~~~~-----~~~~~-~~~-~~~~~~l~~~~~--~~i~~~d~~~W~~~~~~ 272 (345)
.-++..++.++ ....+..+|.......... ..... ..+ ...+|++++.++ +.|..+|.++.+.+...
T Consensus 228 spdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 228 IADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp EETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 45777777764 2235666776655543321 10001 111 123777777766 68889998886555443
Q ss_pred hhh-cccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCC
Q 019186 273 SEF-RRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 319 (345)
Q Consensus 273 p~~-~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~ 319 (345)
... ..........-+++.++.|+.++ .|.+||+..
T Consensus 308 ~~gH~~~V~~v~fSpdg~~laS~S~D~------------tvrvw~ip~ 343 (365)
T 4h5i_A 308 KQAHSFAITEVTISPDSTYVASVSAAN------------TIHIIKLPL 343 (365)
T ss_dssp TTSSSSCEEEEEECTTSCEEEEEETTS------------EEEEEECCT
T ss_pred cCcccCCEEEEEECCCCCEEEEEeCCC------------eEEEEEcCC
Confidence 211 11122222233778887777543 467777643
No 272
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=83.52 E-value=8.2 Score=33.18 Aligned_cols=76 Identities=11% Similarity=0.042 Sum_probs=41.9
Q ss_pred CcEEEEEecCC----CCeEEEEeCCCCCEEeCCCCCccc--cccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcC
Q 019186 55 ENLLCVCAFDP----ENLWQLYDPLRDLWITLPVLPSKI--RHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFA 126 (345)
Q Consensus 55 ~~~l~v~gg~~----~~~~~~yd~~~~~W~~~~~~~~~~--~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~ 126 (345)
.+.||+..... ...+..||+.+++-...-.++... ....-..+++. ++.+|+...... .
T Consensus 77 ~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~-------------~ 143 (343)
T 2qe8_A 77 NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD-------------D 143 (343)
T ss_dssp SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG-------------G
T ss_pred CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC-------------C
Confidence 56788875321 367999999988743221222110 01122345555 578998743100 1
Q ss_pred cCceEEEeCCCCC-cccC
Q 019186 127 TNEVWSYDPVTRQ-WSPR 143 (345)
Q Consensus 127 ~~~~~~yd~~t~~-W~~~ 143 (345)
...+.+||+.+++ |+.+
T Consensus 144 ~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVL 161 (343)
T ss_dssp GCEEEEEETTTCCEEEEC
T ss_pred CCeEEEEECCCCCEEEEe
Confidence 3578899998665 4433
No 273
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=82.25 E-value=18 Score=29.10 Aligned_cols=97 Identities=10% Similarity=0.086 Sum_probs=53.1
Q ss_pred eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCC----------CCcc-CCCceeEEE-E--CCEEEEEecCcceEEE
Q 019186 158 LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPD----------LHRT-HNSACTGVV-I--GGKVHVLHKGLSTVQV 223 (345)
Q Consensus 158 ~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~----------~~~~-~~~~~~~~~-~--~~~iyv~gG~~~~i~~ 223 (345)
.++++|++-|. .+++|+..++. +..+. +|.. .....-++. . ++++|++-| +..++
T Consensus 71 ~~~~~yfFkG~--------~yw~~~~~~~~-~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--~~ywr 139 (219)
T 1hxn_A 71 WEDKLYLIQDT--------KVYVFLTKGGY-TLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--RRLWW 139 (219)
T ss_dssp ETTEEEEEETT--------EEEEEECSSSC-EECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--TEEEE
T ss_pred ECCcEEEecCC--------EEEEEeCCCCc-eecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--CEEEE
Confidence 48999999763 37888865321 22221 1111 000122222 2 578999975 56789
Q ss_pred EECCCC---CeeeccCCCCCCceEEE-------------cCeEEEEeCcEEEEecCCc
Q 019186 224 LDHMGL---GWTVEDYGWLQGPMAIV-------------HDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 224 yd~~~~---~W~~~~~~~~~~~~~~~-------------~~~l~~~~~~~i~~~d~~~ 265 (345)
||..+. .|...+..+...-++.. ++.+|++.+..-+.|+..+
T Consensus 140 ~d~~~~P~~i~~~~~g~p~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg~~y~r~~~~~ 197 (219)
T 1hxn_A 140 LDLKSGAQATWTELPWPHEKVDGALCMEKPLGPNSCSTSGPNLYLIHGPNLYCYRHVD 197 (219)
T ss_dssp EEGGGGGGCCCEEECCSCSCCSEEEEESSCSSSCCSCSSSCEEEEEETTEEEEESSHH
T ss_pred EeCCCCceEhhhcCCCCCCCcCEEEEccccccccceeccCCeEEEEECCEEEEEeCCc
Confidence 986532 34332222222222222 4578888888888888755
No 274
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=81.79 E-value=23 Score=30.02 Aligned_cols=93 Identities=10% Similarity=-0.091 Sum_probs=51.3
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceE--eCCCCCccCCCceeE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWV--PIPDLHRTHNSACTG 204 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~--~~~~~~~~~~~~~~~ 204 (345)
..+.+||..+++-...........-.+++.. ++.+++.|+.++ .+.+||..+.+-. .+.. . . ......
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~~-~-h-~~~v~~ 219 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG------ILDVYNLSSPDQASSRFPV-D-E-EAKIKE 219 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS------CEEEEESSCTTSCCEECCC-C-T-TSCEEE
T ss_pred CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC------EEEEEECCCCCCCccEEec-c-C-CCCEEE
Confidence 4688899887764322211111112223332 677778777553 4899999887532 2221 0 1 112222
Q ss_pred EEE--CCEEEEEecCcceEEEEECCCCC
Q 019186 205 VVI--GGKVHVLHKGLSTVQVLDHMGLG 230 (345)
Q Consensus 205 ~~~--~~~iyv~gG~~~~i~~yd~~~~~ 230 (345)
+.. ++...+.++ ...+..||+++.+
T Consensus 220 l~fs~~g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 220 VKFADNGYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp EEECTTSSEEEEEE-SSBEEEEETTSST
T ss_pred EEEeCCCCEEEEEe-CCeEEEEEcCCCC
Confidence 322 566666665 4489999998764
No 275
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=81.78 E-value=38 Score=32.55 Aligned_cols=188 Identities=8% Similarity=-0.003 Sum_probs=92.4
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCccc--CC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSP--RA 144 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~--~~ 144 (345)
..++++|..+++..... .+. ....+++...++-++++....... .+..........+++++..+.+-.. +-
T Consensus 189 ~~i~v~dl~tg~~~~~~-~~~----~~~~~~~wspD~~l~~~~~~~~~~--~~~~~~~~~~~~v~~~~lgt~~~~~~lv~ 261 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADE-LKW----VKFSGLAWLGNDALLYSRFAEPKE--GQAFQALNYNQTVWLHRLGTPQSADQPVF 261 (741)
T ss_dssp EEEEEEETTTCCEEEEE-EEE----EESCCCEESTTSEEEEEECCCC----------CCCCCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEEECCCCCCCCcc-CCC----ceeccEEEECCCEEEEEEecCccc--ccccccCCCCCEEEEEECCCCchhCEEEe
Confidence 46899999999875431 111 111123333224333333221100 0000011124568889887765321 11
Q ss_pred CCC-CCceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCC--c-eEeCCCCCccCCCceeEEEECCEEEEEec---
Q 019186 145 SML-VPRAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKD--V-WVPIPDLHRTHNSACTGVVIGGKVHVLHK--- 216 (345)
Q Consensus 145 ~~~-~~r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~--~-W~~~~~~~~~~~~~~~~~~~~~~iyv~gG--- 216 (345)
..+ .+......... +++..++...... ....+++++|..+. . |+.+...... ... .....++.||+...
T Consensus 262 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~-~~~~dg~~l~~~s~~~~ 338 (741)
T 1yr2_A 262 ATPELPKRGHGASVSSDGRWVVITSSEGT-DPVNTVHVARVTNGKIGPVTALIPDLKA-QWD-FVDGVGDQLWFVSGDGA 338 (741)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEECTT-CSCCEEEEEEEETTEECCCEEEECSSSS-CEE-EEEEETTEEEEEECTTC
T ss_pred ccCCCCeEEEEEEECCCCCEEEEEEEccC-CCcceEEEEECCCCCCcccEEecCCCCc-eEE-EEeccCCEEEEEECCCC
Confidence 111 11112222222 5554444333221 13568999998876 6 7776543333 222 22345777887753
Q ss_pred CcceEEEEECCC--CCeeeccCCCC--CCceEEEcCeEEEEeC----cEEEEecCC
Q 019186 217 GLSTVQVLDHMG--LGWTVEDYGWL--QGPMAIVHDSVYLMSH----GLIIKQHRD 264 (345)
Q Consensus 217 ~~~~i~~yd~~~--~~W~~~~~~~~--~~~~~~~~~~l~~~~~----~~i~~~d~~ 264 (345)
....++.+|..+ ..|+.+.+... ...+...++.+++... ..++.++.+
T Consensus 339 ~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 339 PLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp TTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETT
T ss_pred CCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence 356699999887 57887643322 1123334777766643 567777753
No 276
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=81.35 E-value=18 Score=32.01 Aligned_cols=144 Identities=11% Similarity=0.054 Sum_probs=69.0
Q ss_pred EEEEecCCCCeEEEEeCCCCC---EEe--CCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCce
Q 019186 58 LCVCAFDPENLWQLYDPLRDL---WIT--LPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEV 130 (345)
Q Consensus 58 l~v~gg~~~~~~~~yd~~~~~---W~~--~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (345)
+++.|+ ....+.+||..+.. +.. ....... ...-.+++.. ++.+++.|+. ...+
T Consensus 196 ~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~l~s~~~----------------dg~i 256 (430)
T 2xyi_A 196 YLLSAS-DDHTICLWDINATPKEHRVIDAKNIFTGH--TAVVEDVAWHLLHESLFGSVAD----------------DQKL 256 (430)
T ss_dssp EEEEEC-TTSCEEEEETTSCCBGGGEEECSEEECCC--SSCEEEEEECSSCTTEEEEEET----------------TSEE
T ss_pred eEEEEe-CCCeEEEEeCCCCCCCCceeccceeecCC--CCCEeeeEEeCCCCCEEEEEeC----------------CCeE
Confidence 344443 34578899987732 111 1111110 0122334443 4567777664 3468
Q ss_pred EEEeCCCCC-cccCCCCCCCceee-eeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE
Q 019186 131 WSYDPVTRQ-WSPRASMLVPRAMF-ACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV 206 (345)
Q Consensus 131 ~~yd~~t~~-W~~~~~~~~~r~~~-~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 206 (345)
.+||..+.. ...+..+....... +++.. +..+++.|+.++ .+.+||..+.. ..+..+... ......+.
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg------~v~vwd~~~~~-~~~~~~~~h-~~~v~~i~ 328 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK------TVALWDLRNLK-LKLHSFESH-KDEIFQVQ 328 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS------EEEEEETTCTT-SCSEEEECC-SSCEEEEE
T ss_pred EEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC------eEEEEeCCCCC-CCeEEeecC-CCCEEEEE
Confidence 899998753 11111111111111 22222 334777777543 48999987632 011111111 11222222
Q ss_pred E---CCEEEEEecCcceEEEEECCC
Q 019186 207 I---GGKVHVLHKGLSTVQVLDHMG 228 (345)
Q Consensus 207 ~---~~~iyv~gG~~~~i~~yd~~~ 228 (345)
. +..+++.++..+.+..||..+
T Consensus 329 ~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 329 WSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 2 235777777677888898865
No 277
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=81.08 E-value=25 Score=29.88 Aligned_cols=128 Identities=5% Similarity=-0.065 Sum_probs=58.6
Q ss_pred CceEEEeCCCCCcccCCCCCCC-ceeeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE
Q 019186 128 NEVWSYDPVTRQWSPRASMLVP-RAMFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV 205 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~-r~~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~ 205 (345)
..+.+||..+++... .+... ..-.+++.. ++..++.|+.++ .+.+||.....-......... ......+
T Consensus 98 ~~v~lwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~l~s~~~d~------~i~~wd~~~~~~~~~~~~~~~-~~~v~~~ 168 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYK--RFVGHQSEVYSVAFSPDNRQILSAGAER------EIKLWNILGECKFSSAEKENH-SDWVSCV 168 (343)
T ss_dssp SEEEEEETTSSCEEE--EEECCCSCEEEEEECSSTTEEEEEETTS------CEEEEESSSCEEEECCTTTSC-SSCEEEE
T ss_pred CcEEEEECCCCcEEE--EEcCCCCcEEEEEECCCCCEEEEEcCCC------EEEEEeccCCceeeeecccCC-Cceeeee
Confidence 468889998765321 11111 111222222 566666666543 488888765433332222111 1112222
Q ss_pred EEC------------CEEEEEecCcceEEEEECCCCCeeeccCCCCC-CceEE-EcCeEEEEeC--cEEEEecCC
Q 019186 206 VIG------------GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQ-GPMAI-VHDSVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 206 ~~~------------~~iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~-~~~~~-~~~~l~~~~~--~~i~~~d~~ 264 (345)
... +.+++.|+....+..||.....-......... ..++. .+++.++.++ +.+..+|..
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 221 13556666667788888433211111111111 11111 2556555554 677778763
No 278
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=80.70 E-value=19 Score=28.35 Aligned_cols=98 Identities=12% Similarity=0.023 Sum_probs=54.4
Q ss_pred ECCEEEEEecCcceEEEEECCCCCe---eeccC----CC-CCCceEE---EcCeEEEEeCcEEEEecCCceEEe------
Q 019186 207 IGGKVHVLHKGLSTVQVLDHMGLGW---TVEDY----GW-LQGPMAI---VHDSVYLMSHGLIIKQHRDVRKVV------ 269 (345)
Q Consensus 207 ~~~~iyv~gG~~~~i~~yd~~~~~W---~~~~~----~~-~~~~~~~---~~~~l~~~~~~~i~~~d~~~W~~~------ 269 (345)
.++++|++-| +..++|+..+... ..+.. .+ ...-++. .++++|++.|...+.||..+-+..
T Consensus 60 ~~g~~yfFkg--~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~~yw~yd~~~~~v~~gyPk~ 137 (196)
T 3c7x_A 60 KDGKFVFFKG--DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKN 137 (196)
T ss_dssp TTSCEEEEET--TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETTEEEEEETTTTEECTTCSEE
T ss_pred CCCcEEEecC--CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECCEEEEEeCCcccccCCCCcc
Confidence 4788998865 5678887542110 01111 11 1122233 268999999999999998652222
Q ss_pred -ccchhhcccceeEEEEECC-eEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 270 -ASASEFRRRIGFAMIGMGD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 270 -~~~p~~~~r~~~~~~~~~~-~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
..++......-.++..-++ ++|+|-| +..|.||..+.
T Consensus 138 i~~~~gip~~idaAf~~~~~~~~YfFkg--------------~~y~r~d~~~~ 176 (196)
T 3c7x_A 138 IKVWEGIPESPRGSFMGSDEVFTYFYKG--------------NKYWKFNNQKL 176 (196)
T ss_dssp GGGSBTCCSSCSEEEECTTSSEEEEEET--------------TEEEEEETTTT
T ss_pred HHHCCCcCCCcceeEEecCCCEEEEEEC--------------CEEEEEECCcc
Confidence 2222111222333333244 8999966 25678888765
No 279
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=80.62 E-value=38 Score=32.56 Aligned_cols=156 Identities=12% Similarity=0.027 Sum_probs=84.7
Q ss_pred CcEEEEEecC---CCCeEEEEeCCCC--C-EEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAFD---PENLWQLYDPLRD--L-WITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg~---~~~~~~~yd~~~~--~-W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
+..|++.... ..+.++++|..+. + |..+..-... . ...+...++.||+...... ...
T Consensus 279 G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~-~~~~~~dg~~l~~~s~~~~-------------~~~ 341 (741)
T 1yr2_A 279 GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA---Q-WDFVDGVGDQLWFVSGDGA-------------PLK 341 (741)
T ss_dssp SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS---C-EEEEEEETTEEEEEECTTC-------------TTC
T ss_pred CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc---e-EEEEeccCCEEEEEECCCC-------------CCC
Confidence 4455555433 3568899998877 6 7776543221 1 1122334667777754311 235
Q ss_pred ceEEEeCCC--CCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE
Q 019186 129 EVWSYDPVT--RQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV 206 (345)
Q Consensus 129 ~~~~yd~~t--~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 206 (345)
.++++|..+ ..|+.+-+-... .-..+...++.+++....++ ...++++|.....-+.+. ++.. . ....+.
T Consensus 342 ~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~-~~~~-~-~v~~~~ 413 (741)
T 1yr2_A 342 KIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDA----KSQVLAFDLDGKPAGAVS-LPGI-G-SASGLS 413 (741)
T ss_dssp EEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETT----EEEEEEEETTSCEEEECB-CSSS-C-EEEEEE
T ss_pred EEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEECC----EEEEEEEeCCCCceeecc-CCCC-e-EEEEee
Confidence 799999887 468765422211 11233444777777654332 456888887554444442 2222 1 111222
Q ss_pred E--CC-EEEEEe-c--CcceEEEEECCCCCeeecc
Q 019186 207 I--GG-KVHVLH-K--GLSTVQVLDHMGLGWTVED 235 (345)
Q Consensus 207 ~--~~-~iyv~g-G--~~~~i~~yd~~~~~W~~~~ 235 (345)
. ++ .+++.. + ...+++.||+.+++.+.+.
T Consensus 414 ~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 414 GRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp CCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECS
T ss_pred cCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 1 33 344432 2 3467999999888776654
No 280
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=77.87 E-value=61 Score=32.60 Aligned_cols=144 Identities=11% Similarity=-0.025 Sum_probs=70.6
Q ss_pred eEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEecCcceEE-EEECCCCCeeeccCCCCC-CceE-EEcCeEEEE
Q 019186 177 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQ-VLDHMGLGWTVEDYGWLQ-GPMA-IVHDSVYLM 253 (345)
Q Consensus 177 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~-~yd~~~~~W~~~~~~~~~-~~~~-~~~~~l~~~ 253 (345)
.++.+|..+..-..+...+.. ........ +++.+++++....++ .+|..+++-..+...... ..++ ..+|+.+++
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~-~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~ 395 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRI-RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVV 395 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCE-EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEE
T ss_pred EEEEEcCCCCceEEccCCCcc-eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEE
Confidence 578888877765554332221 11111123 555444443456788 889888776655421111 1111 125555444
Q ss_pred eC--cEEEEecCCc--eEEeccchhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcC
Q 019186 254 SH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVS 328 (345)
Q Consensus 254 ~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~ 328 (345)
.. ..++.+|.++ -+.+.... ..........-+++.+++++....... .......+++||+.+. +..++.
T Consensus 396 ~~~~~~v~~~d~~tg~~~~~~~~~--~~~v~~~~~SpDG~~la~~~~~~~~~~--~~~~~~~i~l~d~~~g--~~~~l~ 468 (1045)
T 1k32_A 396 ANDRFEIMTVDLETGKPTVIERSR--EAMITDFTISDNSRFIAYGFPLKHGET--DGYVMQAIHVYDMEGR--KIFAAT 468 (1045)
T ss_dssp EETTSEEEEEETTTCCEEEEEECS--SSCCCCEEECTTSCEEEEEEEECSSTT--CSCCEEEEEEEETTTT--EEEECS
T ss_pred ECCCCeEEEEECCCCceEEeccCC--CCCccceEECCCCCeEEEEecCccccc--cCCCCCeEEEEECCCC--cEEEee
Confidence 43 6888888876 22222111 111122223346776677665430000 0012247888888876 555543
No 281
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=77.51 E-value=27 Score=28.23 Aligned_cols=61 Identities=11% Similarity=0.046 Sum_probs=35.7
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEe-----CC-CCCccC----CCce-eEEE--ECCEEEEEecCcceEEEEE
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVP-----IP-DLHRTH----NSAC-TGVV--IGGKVHVLHKGLSTVQVLD 225 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~-----~~-~~~~~~----~~~~-~~~~--~~~~iyv~gG~~~~i~~yd 225 (345)
++++|++-|. ..++||..+++-.. +. .+|... .... +++. .++++|++-| +..++||
T Consensus 129 ~~k~yfFkG~--------~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--~~Ywr~d 198 (227)
T 3lp9_A 129 GKEVYLFKGD--------QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--DHYARVK 198 (227)
T ss_dssp TTEEEEEETT--------EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--TEEEEEE
T ss_pred CCEEEEEECC--------EEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--CEEEEEE
Confidence 6899999773 38999987553211 10 122110 0112 2232 3588999974 6788999
Q ss_pred CCCC
Q 019186 226 HMGL 229 (345)
Q Consensus 226 ~~~~ 229 (345)
..++
T Consensus 199 ~~~~ 202 (227)
T 3lp9_A 199 VTPX 202 (227)
T ss_dssp CCSS
T ss_pred CCcc
Confidence 8766
No 282
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=77.03 E-value=23 Score=28.62 Aligned_cols=20 Identities=15% Similarity=0.129 Sum_probs=15.9
Q ss_pred CCEEEEEecCcceEEEEECCCC
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGL 229 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~ 229 (345)
++++|++-| +..++||..++
T Consensus 129 ~~k~yfFkG--~~yw~~d~~~~ 148 (227)
T 3lp9_A 129 GKEVYLFKG--DQYARIDYGSN 148 (227)
T ss_dssp TTEEEEEET--TEEEEEETTTT
T ss_pred CCEEEEEEC--CEEEEEeCCCc
Confidence 689999975 67889998655
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=76.70 E-value=11 Score=33.85 Aligned_cols=128 Identities=9% Similarity=0.022 Sum_probs=68.9
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCCCCceE---eCCCCCccCCCce
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPEKDVWV---PIPDLHRTHNSAC 202 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~~~~W~---~~~~~~~~~~~~~ 202 (345)
..+.++|+.+++.+.+.. ...+ -..+++- ++ .||+...... .....+..++... .+. .++.+..+ .
T Consensus 159 ~~I~~id~~~~~v~~~~~-~~~~-P~~ia~d~~G~~lyvad~~~~--~~~~~v~~~~~~g-~~~~~~~l~~~~~p----~ 229 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS-GLSK-VRTICWTHEADSMIITNDQNN--NDRPNNYILTRES-GFKVITELTKGQNC----N 229 (430)
T ss_dssp EEEEEEETTTTEEEEEEC-CCSC-EEEEEECTTSSEEEEEECCSC--TTSEEEEEEEGGG-TSCSEEEEEECSSC----C
T ss_pred CcEEEEECCCCEEEEEec-CCCC-cceEEEeCCCCEEEEEeCCCC--cccceEEEEeCCC-ceeeeeeeccCCCc----e
Confidence 468899998887665533 1111 1223322 34 4888864332 2223466666533 232 22222222 2
Q ss_pred eEEEE--CCEEEEEecCcceEEEEECCCCCeeec---cCCCCCCceEE-EcCe-EEEEeC--cEEEEecCC
Q 019186 203 TGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVE---DYGWLQGPMAI-VHDS-VYLMSH--GLIIKQHRD 264 (345)
Q Consensus 203 ~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~~---~~~~~~~~~~~-~~~~-l~~~~~--~~i~~~d~~ 264 (345)
.+++. ++.||+..-....+++||+.+..-..+ .....+..++. .+++ ||+.+. ..|+.++.+
T Consensus 230 giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 230 GAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 33333 678999865567899999987654222 21111223333 2555 999876 677776543
No 284
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=76.23 E-value=37 Score=29.24 Aligned_cols=232 Identities=10% Similarity=0.018 Sum_probs=116.6
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCcc---cccc-ceeEEEE----ECCEEEEEcCCCCCCCCCCCCCCCCcC
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSK---IRHL-AHFGVVS----TAGKLFVLGGGSDAVDPLTGDQDGSFA 126 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~---~~~~-~~~~~~~----~~~~lyv~GG~~~~~~~~~~~~~~~~~ 126 (345)
++.+|+.. .....+..+|+..+.-.++ ..+.. -... .-.++.+ -+++|+|+.-... ++.-.......
T Consensus 24 ~g~~~vs~-l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~---af~~~g~~~~g 98 (334)
T 2p9w_A 24 RQVFYQSN-LYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK---SFNFADQSSHG 98 (334)
T ss_dssp TTEEEEEE-TTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT---TTCTTSCCSSS
T ss_pred CCEEEEEe-ccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc---cccccccccCC
Confidence 45566543 3457899999987755444 33321 0011 2245555 2577888621100 00000111223
Q ss_pred cCceEEEeCC---CCCcccCCCCC---CC-------ce-eeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCc---
Q 019186 127 TNEVWSYDPV---TRQWSPRASML---VP-------RA-MFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDV--- 187 (345)
Q Consensus 127 ~~~~~~yd~~---t~~W~~~~~~~---~~-------r~-~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--- 187 (345)
...+.+||+. +++=.....+. .. +. ..--.++ +|.+||.+... ...++.+|+....
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-----~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-----MPAIARVSADGKTVST 173 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES-----SCEEEEECTTSCCEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC-----CCeEEEEeCCCCEEee
Confidence 5679999988 44321111221 00 11 1112223 68999976533 1458888887542
Q ss_pred eEeCCCCCccCCCceeEE-EE-CC-EEEEEecCcceEEEEECCCCCeeeccCC------CC--CCc-eE-EEcCeEEEEe
Q 019186 188 WVPIPDLHRTHNSACTGV-VI-GG-KVHVLHKGLSTVQVLDHMGLGWTVEDYG------WL--QGP-MA-IVHDSVYLMS 254 (345)
Q Consensus 188 W~~~~~~~~~~~~~~~~~-~~-~~-~iyv~gG~~~~i~~yd~~~~~W~~~~~~------~~--~~~-~~-~~~~~l~~~~ 254 (345)
|-.-.+.... +.+..++ .. ++ .|++..+ ...+.+||+.+....+++.. .. .-. +. ..+|++.++.
T Consensus 174 ~~~~~~~~~~-~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~ 251 (334)
T 2p9w_A 174 FAWESGNGGQ-RPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVG 251 (334)
T ss_dssp EEECCCCSSS-CCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEE
T ss_pred eeecCCCccc-ccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEE
Confidence 5433332333 3344444 44 34 5666665 78899999885433122210 11 112 12 2688885554
Q ss_pred C---cEEEEecCCceEEecc---chhhc-ccceeEEEE----ECCeEEEEcceec
Q 019186 255 H---GLIIKQHRDVRKVVAS---ASEFR-RRIGFAMIG----MGDDIYVIGGVIG 298 (345)
Q Consensus 255 ~---~~i~~~d~~~W~~~~~---~p~~~-~r~~~~~~~----~~~~l~i~GG~~~ 298 (345)
. ..+...+.+.|+.... .|... .+.....+. .+++||++.++..
T Consensus 252 ~~~~~~~~l~S~DgW~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 252 ARAPYAISFRSWDNWKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp EETTEEEEEECSSTTSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCGG
T ss_pred cCCCCEEEEECCCCcceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeecC
Confidence 3 4455556665887633 33222 233333334 5789999987654
No 285
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=75.92 E-value=51 Score=30.71 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=51.7
Q ss_pred CceEEEeCCCCCcccCCCCCCCce-eeeeeEe-CCeEEEEcCcCCCCCCCceEEEEeCCCCceEe-CCC--CCc-cCCCc
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRA-MFACCAL-KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVP-IPD--LHR-THNSA 201 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~-~~~~~~~-~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~-~~~--~~~-~~~~~ 201 (345)
..+.+||..+.+... .+..... -.+++.. ++.+++.|+.++ .+.+||..+.+-.. +.. +.. .+...
T Consensus 170 ~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D~------~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 170 NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGDG------TIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECCC------cEEEEECCCCcEeeeeccccccccccCCC
Confidence 457788876543221 1221111 1222222 677777777553 38899987765432 211 100 10111
Q ss_pred eeEEEE--CCEEEEEecCcceEEEEECCCCCee
Q 019186 202 CTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWT 232 (345)
Q Consensus 202 ~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~ 232 (345)
...+.. +++.++.++.-..+..+|..+.+..
T Consensus 242 V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 242 VFGLTWSPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 222222 6677777777788999999887654
No 286
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=75.87 E-value=28 Score=27.65 Aligned_cols=103 Identities=9% Similarity=-0.042 Sum_probs=58.8
Q ss_pred eeEEEECCEEEEEecCcceEEEEECCCCCeee--c----cCCCCCC-ceEEE--cCeEEEEeCcEEEEecCCc----e-E
Q 019186 202 CTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV--E----DYGWLQG-PMAIV--HDSVYLMSHGLIIKQHRDV----R-K 267 (345)
Q Consensus 202 ~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W~~--~----~~~~~~~-~~~~~--~~~l~~~~~~~i~~~d~~~----W-~ 267 (345)
-+++..++++|++=| ..+++++.....+.. + +.++... ++... ++++|++-|...+.|+..+ + +
T Consensus 27 DAi~~~~g~~y~Fkg--~~~wr~~~~~~~~~p~~I~~~wp~Lp~~iDAa~~~~~~~~iyfFkG~~~w~~~~~~~~~gyPk 104 (207)
T 1pex_A 27 DAITSLRGETMIFKD--RFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPK 104 (207)
T ss_dssp SEEEEETTEEEEEET--TEEEEECSSSSCCEEEEHHHHCTTSCSSCCEEEEETTTTEEEEEETTEEEEESTTCCCTTCSE
T ss_pred eEEEeCCCcEEEEEC--CEEEEEeCCCcCCCceehhHhccCCCCCccEEEEeccCCcEEEEccCEEEEEeCCeeccCCce
Confidence 355668999999964 456777654433221 1 1122222 22222 6999999999999998654 1 2
Q ss_pred Eecc--chhhcccceeEEEEE-CCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 268 VVAS--ASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 268 ~~~~--~p~~~~r~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
.+.. +|......-.++... ++++|+|-| +..|.||..++
T Consensus 105 ~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------------~~ywr~d~~~~ 146 (207)
T 1pex_A 105 KISELGLPKEVKKISAAVHFEDTGKTLLFSG--------------NQVWRYDDTNH 146 (207)
T ss_dssp ESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------------TEEEEEETTTT
T ss_pred eccccCCCCCCccccEEEEeCCCCEEEEEeC--------------CEEEEEeCcCc
Confidence 2322 231112344444433 479999977 25677877654
No 287
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=75.67 E-value=56 Score=31.06 Aligned_cols=89 Identities=7% Similarity=-0.157 Sum_probs=45.9
Q ss_pred eEEEEeCCC-CceEeCCCC-CccCCCceeEEEECCEEEEEec----CcceEEEEECCCCCeeeccCCCC-------CCce
Q 019186 177 QAEMYDPEK-DVWVPIPDL-HRTHNSACTGVVIGGKVHVLHK----GLSTVQVLDHMGLGWTVEDYGWL-------QGPM 243 (345)
Q Consensus 177 ~v~~yd~~~-~~W~~~~~~-~~~~~~~~~~~~~~~~iyv~gG----~~~~i~~yd~~~~~W~~~~~~~~-------~~~~ 243 (345)
.++++|..+ .+-..+... ............-+..|++... ....++.+|+.+++...+..... ....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 788889887 665444322 1110111122222344554432 35678899998887655421111 1222
Q ss_pred EEEcCeEEEEeC----cEEEEecCCc
Q 019186 244 AIVHDSVYLMSH----GLIIKQHRDV 265 (345)
Q Consensus 244 ~~~~~~l~~~~~----~~i~~~d~~~ 265 (345)
...+|+++..+. ..++.+|.+.
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~ 369 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKG 369 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSS
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCC
Confidence 234677666554 4788887544
No 288
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=74.39 E-value=41 Score=28.90 Aligned_cols=183 Identities=9% Similarity=-0.007 Sum_probs=91.8
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
..+.+.++.....+.++|+.+.+........ ..-.+++.. ++++++.++. ..+.+++
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~~~-----~~V~~v~fspdg~~l~s~s~-----------------~~~~~~~ 203 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIETR-----GEVKDLHFSTDGKVVAYITG-----------------SSLEVIS 203 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEECS-----SCCCEEEECTTSSEEEEECS-----------------SCEEEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeCCC-----CceEEEEEccCCceEEeccc-----------------eeEEEEE
Confidence 3344445555567899999887644321111 122234443 5666666642 3467777
Q ss_pred CCCCCcccCCCCCCCceee-eee-EeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC--CCCccCCCceeEE--EEC
Q 019186 135 PVTRQWSPRASMLVPRAMF-ACC-ALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGV--VIG 208 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r~~~-~~~-~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~--~~~ 208 (345)
..+++.............. +++ .-++..++.++.++. ....+..+|.......... .+... .....++ .-+
T Consensus 204 ~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~--~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Spd 280 (365)
T 4h5i_A 204 TVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG--KGIVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDMK 280 (365)
T ss_dssp TTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS--CCEEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECTT
T ss_pred eccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc--ceeEEeecccccceecceeeeeecCC-CCCeEeEEECCC
Confidence 7766543222222122222 222 236777777665532 1234666776665543321 11111 1112222 237
Q ss_pred CEEEEEecCcceEEEEECCCCCeee-ccCCCC-C-CceEE-EcCeEEEEeC--cEEEEecC
Q 019186 209 GKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWL-Q-GPMAI-VHDSVYLMSH--GLIIKQHR 263 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~~~~W~~-~~~~~~-~-~~~~~-~~~~l~~~~~--~~i~~~d~ 263 (345)
+++++.|+.-..|..||..+.+-.. +...-. . ..++. .+|++++.+. +.|..+|.
T Consensus 281 g~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 281 GELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 7888888777889999998875432 211111 1 11111 2666655554 56666664
No 289
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=73.69 E-value=52 Score=29.70 Aligned_cols=135 Identities=8% Similarity=0.062 Sum_probs=72.3
Q ss_pred eeEeCCeEEEEcCcCCCCCCCceEEEEeCCCC---------ceEeCCCCCccCCCceeEEEE--CCEEEEEecCcceEEE
Q 019186 155 CCALKEKIVVAGGFTSCRKSISQAEMYDPEKD---------VWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQV 223 (345)
Q Consensus 155 ~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~---------~W~~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~ 223 (345)
++..++.+|++-|.. ++.++.... .|.. +|.. . -++... ++++|++=| ..+++
T Consensus 268 i~~~~ge~y~Fkg~~--------~wr~~~~~~~~~p~~I~~~Wp~---LP~~-i--DAa~~~~~~g~~~fFKg--~~~W~ 331 (450)
T 1su3_A 268 ITTIRGEVMFFKDRF--------YMRTNPFYPEVELNFISVFWPQ---LPNG-L--EAAYEFADRDEVRFFKG--NKYWA 331 (450)
T ss_dssp EEEETTEEEEEETTE--------EEECCTTSSSCEEEEGGGTCTT---SCSS-C--CEEEEEGGGTEEEEEET--TEEEE
T ss_pred EEecCCeEEEEeCCE--------EEEEcCCCCcccceehhHhccC---CCCC-e--eEEEEEcCCCeEEEEeC--CEEEE
Confidence 345689999997732 444443332 2332 2322 1 123332 689999865 45677
Q ss_pred EECCCC--Ce-ee------ccCCCCCCceEE-E--cCeEEEEeCcEEEEecCCceEE-------ec-cchhhcccceeEE
Q 019186 224 LDHMGL--GW-TV------EDYGWLQGPMAI-V--HDSVYLMSHGLIIKQHRDVRKV-------VA-SASEFRRRIGFAM 283 (345)
Q Consensus 224 yd~~~~--~W-~~------~~~~~~~~~~~~-~--~~~l~~~~~~~i~~~d~~~W~~-------~~-~~p~~~~r~~~~~ 283 (345)
|+..+. .+ .. .+..+..--++. . ++++|++-|...+.||...-+. +. .+|......-.++
T Consensus 332 ~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~ 411 (450)
T 1su3_A 332 VQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVF 411 (450)
T ss_dssp EETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETTEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEE
T ss_pred ecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCCEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEE
Confidence 764321 00 00 111111112222 2 6899999999999998764211 11 1221122333333
Q ss_pred EEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 284 IGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 284 ~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
..++++|+|-| +..|.||..+.
T Consensus 412 -~~~g~~YFFkg--------------~~ywr~d~~~~ 433 (450)
T 1su3_A 412 -MKDGFFYFFHG--------------TRQYKFDPKTK 433 (450)
T ss_dssp -EETTEEEEEET--------------TEEEEEETTTT
T ss_pred -EcCCeEEEEeC--------------CEEEEEECCcc
Confidence 46899999976 25677887665
No 290
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=73.47 E-value=67 Score=31.85 Aligned_cols=92 Identities=10% Similarity=-0.065 Sum_probs=45.6
Q ss_pred CceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEE-
Q 019186 128 NEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV- 206 (345)
Q Consensus 128 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~- 206 (345)
..+.+||..+.+-... +.....-.+++...++..+.++.+ ..+.++|..+.+-... +... .....+.
T Consensus 39 g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D------~~v~lWd~~~~~~~~~--~~~~--~~V~~v~~ 106 (902)
T 2oaj_A 39 GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK------DTVYVLSLYSQKVLTT--VFVP--GKITSIDT 106 (902)
T ss_dssp SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT------CEEEEEETTTCSEEEE--EECS--SCEEEEEC
T ss_pred CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc------CeEEEEECCCCcEEEE--EcCC--CCEEEEEE
Confidence 3577777655432111 111111223333335544444332 4588999887653211 1111 1122222
Q ss_pred -ECCEEEEEecCcceEEEEECCCCCe
Q 019186 207 -IGGKVHVLHKGLSTVQVLDHMGLGW 231 (345)
Q Consensus 207 -~~~~iyv~gG~~~~i~~yd~~~~~W 231 (345)
-++...++|+....+..||..+.+-
T Consensus 107 sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 107 DASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp CTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 2455666666677899999987754
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=73.27 E-value=63 Score=30.48 Aligned_cols=196 Identities=10% Similarity=-0.010 Sum_probs=107.5
Q ss_pred CeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
..+...++.....+.+. +|... -..-.+++.. ++.||+.--. ...++++++.....+.+.
T Consensus 326 ~~i~~i~l~~~~~~~~~-~~~~~-l~~~~~ld~d~~~~~ly~sD~~----------------~~~I~r~~~~g~~~~~v~ 387 (619)
T 3s94_A 326 TDLRRISLDTPDFTDIV-LQLED-IRHAIAIDYDPVEGYIYWTDDE----------------VRAIRRSFIDGSGSQFVV 387 (619)
T ss_dssp SCEEEEESSSTTCCCEE-CCCSC-CSSEEEEEEETTTTEEEEEETT----------------TTEEEEEETTSCSCEEEE
T ss_pred cceEEEecCCCccceeE-Eeccc-cCccEEEEEEcCCCeEEEEeCC----------------CCeEEEEEcCCCccEEEE
Confidence 35566666555433221 12110 0223345554 5889998532 357899998776555443
Q ss_pred CCCCCceeeeeeE--eCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC--CCCccCCCceeEEEE--CCEEEEEe-cC
Q 019186 145 SMLVPRAMFACCA--LKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGVVI--GGKVHVLH-KG 217 (345)
Q Consensus 145 ~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~--~~~iyv~g-G~ 217 (345)
.-... .-.++++ .++.||+.-.. .+.+++.++....-+.+. .+..+ .++++. +|.||+.. |.
T Consensus 388 ~~~~~-~p~GlAvD~~~~~lY~tD~~------~~~I~v~~~~G~~~~~l~~~~l~~P----~~iavdp~~G~ly~tD~g~ 456 (619)
T 3s94_A 388 TAQIA-HPDGIAVDWVARNLYWTDTG------TDRIEVTRLNGTMRKILISEDLEEP----RAIVLDPMVGYMYWTDWGE 456 (619)
T ss_dssp CSSCS-CCCEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECTTCCSE----EEEEEETTTTEEEEEECSS
T ss_pred ECCCC-CcCceEEecccCcEEEEeCC------CCcEEEEeCCCCeEEEEEECCCCCe----eeEEEEcCCCcEEEecCCC
Confidence 21111 1124444 47899998432 356889888765433332 22222 234444 58999986 34
Q ss_pred cceEEEEECCCCCeeec-cCCCC-CCceEEE--cCeEEEEeC--cEEEEecCCc--eEEeccchhhcccceeEEEEECCe
Q 019186 218 LSTVQVLDHMGLGWTVE-DYGWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDD 289 (345)
Q Consensus 218 ~~~i~~yd~~~~~W~~~-~~~~~-~~~~~~~--~~~l~~~~~--~~i~~~d~~~--W~~~~~~p~~~~r~~~~~~~~~~~ 289 (345)
...|++.++....=+.+ ..... +..+++- +++||+.+. ..|..++.+. -+.+..- .....++++..++.
T Consensus 457 ~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~---~l~~P~glav~~~~ 533 (619)
T 3s94_A 457 IPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVED---KIPHIFGFTLLGDY 533 (619)
T ss_dssp SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEEC---CCCSSCCEEEETTE
T ss_pred CCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEecc---CCCCcEEEEEECCE
Confidence 46788888764432222 22122 3334443 689999987 7888888755 2222110 11233577888899
Q ss_pred EEEEc
Q 019186 290 IYVIG 294 (345)
Q Consensus 290 l~i~G 294 (345)
||+.-
T Consensus 534 ly~tD 538 (619)
T 3s94_A 534 VYWTD 538 (619)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 99873
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=72.95 E-value=64 Score=30.43 Aligned_cols=178 Identities=13% Similarity=-0.028 Sum_probs=97.9
Q ss_pred cEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE--CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
+.||+.-. ....++.+++.....+.+..... ..-.++++. ++.||+.-.. ...+++.
T Consensus 361 ~~ly~sD~-~~~~I~r~~~~g~~~~~v~~~~~----~~p~GlAvD~~~~~lY~tD~~----------------~~~I~v~ 419 (619)
T 3s94_A 361 GYIYWTDD-EVRAIRRSFIDGSGSQFVVTAQI----AHPDGIAVDWVARNLYWTDTG----------------TDRIEVT 419 (619)
T ss_dssp TEEEEEET-TTTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTEEEEEETT----------------TTEEEEE
T ss_pred CeEEEEeC-CCCeEEEEEcCCCccEEEEECCC----CCcCceEEecccCcEEEEeCC----------------CCcEEEE
Confidence 44444432 23456666665544444322111 111245553 7889998532 3578888
Q ss_pred eCCCCCcccCC--CCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE--
Q 019186 134 DPVTRQWSPRA--SMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-- 207 (345)
Q Consensus 134 d~~t~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-- 207 (345)
++....-+.+. .+..+ .++++. ++.||+.--.. ...++..++.-..=+.+.. .. .....+.++
T Consensus 420 ~~~G~~~~~l~~~~l~~P---~~iavdp~~G~ly~tD~g~-----~~~I~r~~~dG~~~~~l~~--~~-l~~P~GlalD~ 488 (619)
T 3s94_A 420 RLNGTMRKILISEDLEEP---RAIVLDPMVGYMYWTDWGE-----IPKIERAALDGSDRVVLVN--TS-LGWPNGLALDY 488 (619)
T ss_dssp ETTSCSCEEEECTTCCSE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEEC--SS-CSCEEEEEEET
T ss_pred eCCCCeEEEEEECCCCCe---eeEEEEcCCCcEEEecCCC-----CCEEEEEccCCCccEEEEe--CC-CCCCeeeEEcc
Confidence 88655322222 22222 234443 58999885211 2468888765432222211 11 122233333
Q ss_pred -CCEEEEEecCcceEEEEECCCCCeeec--cCCCCCCceEEEcCeEEEEeC--cEEEEecCCc
Q 019186 208 -GGKVHVLHKGLSTVQVLDHMGLGWTVE--DYGWLQGPMAIVHDSVYLMSH--GLIIKQHRDV 265 (345)
Q Consensus 208 -~~~iyv~gG~~~~i~~yd~~~~~W~~~--~~~~~~~~~~~~~~~l~~~~~--~~i~~~d~~~ 265 (345)
+++||+.-.....|+++++....=+.+ .....+..+++.++.||..+. ..|+..|..+
T Consensus 489 ~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~ 551 (619)
T 3s94_A 489 DEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRS 551 (619)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSS
T ss_pred cCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCC
Confidence 589999976678899999865433322 223346778889999999986 6677776544
No 293
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=71.16 E-value=38 Score=27.13 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=67.4
Q ss_pred eCCeEEEEcCcCCCCCCCceEEEEeCCCCce--EeC----CCCCccCCCceeEEEECCEEEEEecCcceEEEEECCCCCe
Q 019186 158 LKEKIVVAGGFTSCRKSISQAEMYDPEKDVW--VPI----PDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGW 231 (345)
Q Consensus 158 ~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W--~~~----~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~~yd~~~~~W 231 (345)
.++++|++-|.. .+.++...... ..+ +.+|.. . -++...++++|++-| +..++|+..++ .
T Consensus 27 ~~g~~yfFkg~~--------~Wr~~~~~~~~~p~~Is~~wpgLP~~-I--DAA~~~~~~~yfFkG--~~yw~~~~~~~-~ 92 (219)
T 1hxn_A 27 NHGATYVFSGSH--------YWRLDTNRDGWHSWPIAHQWPQGPST-V--DAAFSWEDKLYLIQD--TKVYVFLTKGG-Y 92 (219)
T ss_dssp TTSCEEEEETTE--------EEESSSSSCTTCCEEGGGTCTTSCSS-C--SEEEEETTEEEEEET--TEEEEEECSSS-C
T ss_pred CCCcEEEEeCCE--------EEEEcCCCCCCCceEhhhhccCCCCC-c--cEEEEECCcEEEecC--CEEEEEeCCCC-c
Confidence 478899997632 45544332211 111 123332 2 234455999999975 56888886432 1
Q ss_pred eeccC----------CCCC-----CceEE---EcCeEEEEeCcEEEEecCCc-----eEEeccchhhcccceeEEEE---
Q 019186 232 TVEDY----------GWLQ-----GPMAI---VHDSVYLMSHGLIIKQHRDV-----RKVVASASEFRRRIGFAMIG--- 285 (345)
Q Consensus 232 ~~~~~----------~~~~-----~~~~~---~~~~l~~~~~~~i~~~d~~~-----W~~~~~~p~~~~r~~~~~~~--- 285 (345)
+..+. .+.. --++. .++++|++.|...+.||..+ |...+.+| ...-.++..
T Consensus 93 ~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~~ywr~d~~~~P~~i~~~~~g~p---~~vdAa~~~~~~ 169 (219)
T 1hxn_A 93 TLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGRRLWWLDLKSGAQATWTELPWPH---EKVDGALCMEKP 169 (219)
T ss_dssp EECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETTEEEEEEGGGGGGCCCEEECCSC---SCCSEEEEESSC
T ss_pred eecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCCEEEEEeCCCCceEhhhcCCCCC---CCcCEEEEcccc
Confidence 11111 1111 22333 26899999999999999654 65544443 334344442
Q ss_pred --------ECCeEEEEcc
Q 019186 286 --------MGDDIYVIGG 295 (345)
Q Consensus 286 --------~~~~l~i~GG 295 (345)
.++.+|+|-|
T Consensus 170 ~~~~~~~~~~~~~YFFkg 187 (219)
T 1hxn_A 170 LGPNSCSTSGPNLYLIHG 187 (219)
T ss_dssp SSSCCSCSSSCEEEEEET
T ss_pred ccccceeccCCeEEEEEC
Confidence 3467999877
No 294
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=70.83 E-value=22 Score=28.47 Aligned_cols=100 Identities=9% Similarity=-0.028 Sum_probs=55.9
Q ss_pred eeEEEECCEEEEEecCcceEEEEECCCC----------CeeeccCCCCCCceEE---EcCeEEEEeCcEEEEecCCc---
Q 019186 202 CTGVVIGGKVHVLHKGLSTVQVLDHMGL----------GWTVEDYGWLQGPMAI---VHDSVYLMSHGLIIKQHRDV--- 265 (345)
Q Consensus 202 ~~~~~~~~~iyv~gG~~~~i~~yd~~~~----------~W~~~~~~~~~~~~~~---~~~~l~~~~~~~i~~~d~~~--- 265 (345)
-++...++++|++=| ..+++++.... .|..++ ..--++. .++++|++-|...+.|+..+
T Consensus 34 DAi~~~~g~~~fFkg--~~~Wr~~~~~~~~~~P~~I~~~wp~lp---~~IDAA~~~~~~~k~yfFkG~~yW~y~~~~~~~ 108 (218)
T 1gen_A 34 DGIAQIRGEIFFFKD--RFIWRTVTPRDKPMGPLLVATFWPELP---EKIDAVYEAPQEEKAVFFAGNEYWIYSASTLER 108 (218)
T ss_dssp SEEEEETTEEEEEET--TEEEEESSTTSCCEEEEEGGGTCTTSC---SCCSEEEEETTTTEEEEEETTEEEEEETTEECT
T ss_pred eEEEeCCCcEEEEEC--CEEEEEeCCCCccCCCEEHHHhcCCCC---CCccEEEEECCCCEEEEEeCCEEEEEcCccccC
Confidence 345667999999975 44556554332 232221 1222222 26899999999999998643
Q ss_pred -e-EEecc--chhhcccceeEEEE-ECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 266 -R-KVVAS--ASEFRRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 266 -W-~~~~~--~p~~~~r~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+ +.+.. +|....+.-.++.. .++++|+|-| +..|.||..++
T Consensus 109 gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------------~~ywr~d~~~~ 154 (218)
T 1gen_A 109 GYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------------DKFWRYNEVKK 154 (218)
T ss_dssp TCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------------TEEEEEETTTT
T ss_pred CCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------------CEEEEEECccc
Confidence 0 11221 22111233344432 3689999976 25677777654
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=69.10 E-value=63 Score=28.80 Aligned_cols=184 Identities=12% Similarity=0.050 Sum_probs=95.3
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEE
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~y 133 (345)
++.||+.-.. ..+..+|+.+++...+.... ..-.+++.. ++.||+....... ....+..+
T Consensus 152 ~g~Lyv~D~~--~~I~~id~~~g~v~~~~~~~-----~~P~giavd~dG~lyVad~~~~~------------~~~gv~~~ 212 (433)
T 4hw6_A 152 YDDLYWVGQR--DAFRHVDFVNQYVDIKTTNI-----GQCADVNFTLNGDMVVVDDQSSD------------TNTGIYLF 212 (433)
T ss_dssp TCEEEEECBT--SCEEEEETTTTEEEEECCCC-----SCEEEEEECTTCCEEEEECCSCT------------TSEEEEEE
T ss_pred CCEEEEEeCC--CCEEEEECCCCEEEEeecCC-----CCccEEEECCCCCEEEEcCCCCc------------ccceEEEE
Confidence 3678877543 78999999888877664411 112234433 5668888632110 12335556
Q ss_pred eCCCCCcccCCCCCCCceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCce-EeCCCCCccCCCceeEEEE-C-
Q 019186 134 DPVTRQWSPRASMLVPRAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDVW-VPIPDLHRTHNSACTGVVI-G- 208 (345)
Q Consensus 134 d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~-~- 208 (345)
+.. ..+.....+.....-..+++. ++.||+.-.. ...+.+||+.+..- ..+...... .....++.. +
T Consensus 213 ~~~-~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~------~~~V~~~d~~~g~~~~~~~~~~~~-~~~~~ia~dpdG 284 (433)
T 4hw6_A 213 TRA-SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYH------HAMISSYDPATGTLTEEEVMMDTK-GSNFHIVWHPTG 284 (433)
T ss_dssp CGG-GTTCCEEEEEECSSBCCCEECTTTCCEEECBTT------CSEEEEECTTTCCEEEEEEECSCC-SSCEEEEECTTS
T ss_pred ECC-CCeeccccccccCCCCEEEEeCCCCeEEEEECC------CCEEEEEECCCCeEEEEEeccCCC-CCcccEEEeCCC
Confidence 553 223210011111111233332 6788877432 34699999986654 222111111 111122222 3
Q ss_pred CEEEEEecCcceEEEEECC--CCCee---e-ccC---------------CCCCCceEE----------EcCeEEEEeC--
Q 019186 209 GKVHVLHKGLSTVQVLDHM--GLGWT---V-EDY---------------GWLQGPMAI----------VHDSVYLMSH-- 255 (345)
Q Consensus 209 ~~iyv~gG~~~~i~~yd~~--~~~W~---~-~~~---------------~~~~~~~~~----------~~~~l~~~~~-- 255 (345)
+.||+..-..+.|.+++.. ++... . ... ...+..+++ .++.||+.+.
T Consensus 285 ~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n 364 (433)
T 4hw6_A 285 DWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS 364 (433)
T ss_dssp SEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC
Confidence 4599987666788997754 33321 1 110 001223454 3568999886
Q ss_pred cEEEEecCCc
Q 019186 256 GLIIKQHRDV 265 (345)
Q Consensus 256 ~~i~~~d~~~ 265 (345)
..|..++++.
T Consensus 365 ~~I~~~~~~G 374 (433)
T 4hw6_A 365 HTVRVLTPEG 374 (433)
T ss_dssp TEEEEECTTS
T ss_pred CEEEEECCCC
Confidence 6888898765
No 296
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=67.30 E-value=59 Score=27.77 Aligned_cols=27 Identities=15% Similarity=-0.082 Sum_probs=17.1
Q ss_pred CcEEEEEecCCCCeEEEEeCC-CCCEEeC
Q 019186 55 ENLLCVCAFDPENLWQLYDPL-RDLWITL 82 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~-~~~W~~~ 82 (345)
+..+|+.. ...+.+.+||.. +++...+
T Consensus 156 G~~l~~~~-~~~~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 156 ETYLYSAD-LTANKLWTHRKLASGEVELV 183 (365)
T ss_dssp SSEEEEEE-TTTTEEEEEEECTTSCEEEE
T ss_pred CCEEEEEc-CCCCEEEEEEECCCCCEEEe
Confidence 44566543 234689999987 6766543
No 297
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=66.44 E-value=60 Score=27.54 Aligned_cols=224 Identities=11% Similarity=0.078 Sum_probs=107.3
Q ss_pred CcEEEEEecC---CCCeEEEEeCCCCCEEeCCCCCc-cccc-cceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAFD---PENLWQLYDPLRDLWITLPVLPS-KIRH-LAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg~---~~~~~~~yd~~~~~W~~~~~~~~-~~~~-~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
++.+|+.... ....+..++ +++-...+.... .... ..-+++++. +++||+....... ....
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~-----------~~~~ 93 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQS-----------KSVP 93 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHH-----------TSCC
T ss_pred CCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCc-----------CCCC
Confidence 5667766421 113667776 444433322110 0000 122345554 4889998531000 0135
Q ss_pred ceEEEeCCCCCcc-cC--CCC-CCC-ceeeeeeEe--CCeEEEEcCcCCCCCCCceEEEEeCCCCc-eEeCCC---C-Cc
Q 019186 129 EVWSYDPVTRQWS-PR--ASM-LVP-RAMFACCAL--KEKIVVAGGFTSCRKSISQAEMYDPEKDV-WVPIPD---L-HR 196 (345)
Q Consensus 129 ~~~~yd~~t~~W~-~~--~~~-~~~-r~~~~~~~~--~~~iyv~gG~~~~~~~~~~v~~yd~~~~~-W~~~~~---~-~~ 196 (345)
.+++||+.+++-. .+ +.. ..+ ..-..+++- ++.+|+..... .....+.+||+.+.+ |+.+.. + +.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~---~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP---DDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS---GGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc---CCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 7999999988732 22 111 111 111334443 47888874311 013568999998664 665532 1 10
Q ss_pred c------C---------------CCceeEEEE--CC-EEEEEecCcceEEEEECCC---C---------CeeeccCCCCC
Q 019186 197 T------H---------------NSACTGVVI--GG-KVHVLHKGLSTVQVLDHMG---L---------GWTVEDYGWLQ 240 (345)
Q Consensus 197 ~------~---------------~~~~~~~~~--~~-~iyv~gG~~~~i~~yd~~~---~---------~W~~~~~~~~~ 240 (345)
+ . ......+.+ ++ .+|+..-....++.++... . ...........
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~p 250 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPIC 250 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSC
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCC
Confidence 0 0 011122333 33 5777643345777776421 0 01111111112
Q ss_pred CceEE-EcCeEEEEeC--cEEEEecC-Cc-eEEeccchhhcccceeEEEE-ECCeEEEEcce
Q 019186 241 GPMAI-VHDSVYLMSH--GLIIKQHR-DV-RKVVASASEFRRRIGFAMIG-MGDDIYVIGGV 296 (345)
Q Consensus 241 ~~~~~-~~~~l~~~~~--~~i~~~d~-~~-W~~~~~~p~~~~r~~~~~~~-~~~~l~i~GG~ 296 (345)
..++. -+|.||+... +.|..+|+ +. ...+...+ ......+++. -++++|+....
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~--~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE--KLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG--GGSCEEEEEECTTSCEEEEECC
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC--ceecCCeeEECCCCcEEEEeCc
Confidence 23333 3788999876 79999998 33 55554333 1122234443 26789998653
No 298
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=66.09 E-value=97 Score=29.84 Aligned_cols=124 Identities=6% Similarity=0.002 Sum_probs=62.2
Q ss_pred CCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC--CCCccCCCceeEEEE---CCE
Q 019186 136 VTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGVVI---GGK 210 (345)
Q Consensus 136 ~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~---~~~ 210 (345)
.-++|+.+..++..........-++.+|+.+ . ..+++=.-.-.+|+.+. .+|.. .. .+... ++.
T Consensus 554 ~G~tW~~~~~~~~~~~i~~~~~~~~~~~a~~--~------g~v~~S~DgG~tW~~~~~~~~p~~-~~--~i~~~~~~~g~ 622 (737)
T 2cn3_A 554 NGNSWKVCTNLGMGAVVASDRVNGKKFYAFY--N------GKFYISTDGGLTFTDTKAPQLPKS-VN--KIKAVPGKEGH 622 (737)
T ss_dssp TTSSCEECBTCCTTCEEEECSSCTTCEEEEE--T------TEEEEESSTTSBCEECCCSSCCSC-CS--EEEEETTEEEE
T ss_pred CCCCCccCCCCCCCceEEEEecCCCEEEEec--C------CEEEEECCCCcCcccccCCCCCCc-cc--eEEEEeCCCCE
Confidence 3567998875543311111111245677665 1 12444333345799874 34432 22 22332 567
Q ss_pred EEEEecCcceEEEEECCCCCeeeccCCCCCCceEE----Ec---CeEEEEeC-----cEEEEecCCc-eEEecc
Q 019186 211 VHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAI----VH---DSVYLMSH-----GLIIKQHRDV-RKVVAS 271 (345)
Q Consensus 211 iyv~gG~~~~i~~yd~~~~~W~~~~~~~~~~~~~~----~~---~~l~~~~~-----~~i~~~d~~~-W~~~~~ 271 (345)
+|+.+. ...++.-+=.-.+|+.+........... .+ +.||+++. +.....|... |+++..
T Consensus 623 l~~~~~-~g~l~~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~g~~~gl~~S~D~G~tW~~~~~ 695 (737)
T 2cn3_A 623 VWLAAR-EGGLWRSTDGGYTFEKLSNVDTAHVVGFGKAAPGQDYMAIYITGKIDNVLGFFRSDDAGKTWVRIND 695 (737)
T ss_dssp EEEECB-TTCEEEESSTTSSCEECTTCSEEEEEEEECCCTTCSSCEEEEEEEETTEEEEEEESSTTSSCEECSB
T ss_pred EEEEeC-CCcEEEEeCCCcccEECcCCCccceEEEeecCCCCCCcEEEEEEecCCcceEEEeCCCCCCCEeccC
Confidence 888773 3356655444578999864322211222 12 26888752 2223334433 999973
No 299
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=64.24 E-value=50 Score=25.85 Aligned_cols=102 Identities=7% Similarity=-0.086 Sum_probs=59.0
Q ss_pred eEEEECCEEEEEecCcceEEEEECCCC--Ceee--c----cCCCCCCceEEE---cCeEEEEeCcEEEEecCCceEE---
Q 019186 203 TGVVIGGKVHVLHKGLSTVQVLDHMGL--GWTV--E----DYGWLQGPMAIV---HDSVYLMSHGLIIKQHRDVRKV--- 268 (345)
Q Consensus 203 ~~~~~~~~iyv~gG~~~~i~~yd~~~~--~W~~--~----~~~~~~~~~~~~---~~~l~~~~~~~i~~~d~~~W~~--- 268 (345)
+++..++++|++=| ..+++++.... .... + +..+..--++.. ++++|++-|...+.|+..+-..
T Consensus 11 Ai~~~~g~~yfFkg--~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~IDAa~~~~~~~~~yfFkG~~yw~~~~~~~~~Pk~ 88 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--GKYWRFSEGRGSRPQGPFLIADKWPALPRKLDSVFEEPLSKKLFFFSGRQVWVYTGASVLGPRR 88 (195)
T ss_dssp EEEEETTEEEEEET--TEEEEECCSSSCCCEEEEEHHHHCTTSCSSCSEEEECTTTCCEEEEETTEEEEEETTEEEEEEE
T ss_pred EEEEeCCEEEEEEC--CEEEEEECCccccCCCcEEhhhccCCCCCCccEEEEECCCCeEEEEeCCEEEEEcCCccCCCEE
Confidence 45668999999965 56777766542 1211 1 112222222222 6899999999999998765221
Q ss_pred ecc--chhhcccceeEEEEECCeEEEEcceecCCCCcccccccCceeeeccCCC
Q 019186 269 VAS--ASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 320 (345)
Q Consensus 269 ~~~--~p~~~~r~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 320 (345)
+.. +|......-.++...++++|+|-| +..|.||..++
T Consensus 89 i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------------~~ywr~d~~~~ 128 (195)
T 1itv_A 89 LDKLGLGADVAQVTGALRSGRGKMLLFSG--------------RRLWRFDVKAQ 128 (195)
T ss_dssp GGGGTCCTTCCCCCEEEECSTTEEEEEET--------------TEEEEEETTTT
T ss_pred eeecccCCCccceeEEEEcCCCeEEEEeC--------------CEEEEEeCCcc
Confidence 111 121112454555544689999966 25677777654
No 300
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=64.03 E-value=80 Score=28.12 Aligned_cols=20 Identities=20% Similarity=0.082 Sum_probs=15.6
Q ss_pred CCEEEEEecCcceEEEEECC
Q 019186 208 GGKVHVLHKGLSTVQVLDHM 227 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~ 227 (345)
++.||+.......|.++++.
T Consensus 354 ~g~lyvaD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 354 EYDFYFCDRDSHTVRVLTPE 373 (433)
T ss_dssp CEEEEEEETTTTEEEEECTT
T ss_pred CCcEEEEECCCCEEEEECCC
Confidence 46799987667788999873
No 301
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=63.76 E-value=36 Score=30.02 Aligned_cols=72 Identities=11% Similarity=0.022 Sum_probs=42.9
Q ss_pred CCeEEEEcCc---CCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECC--EEEEEecCcceEEEEECCCCCee
Q 019186 159 KEKIVVAGGF---TSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGG--KVHVLHKGLSTVQVLDHMGLGWT 232 (345)
Q Consensus 159 ~~~iyv~gG~---~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~iyv~gG~~~~i~~yd~~~~~W~ 232 (345)
++++|+.-+. ..+...-+.++++|.++.+-.. ..+...+...-.+.-++ .+|+..+..+++..||..+++-.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 6789997321 1111224689999999876432 22222111122223354 47877666789999999988754
No 302
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=60.90 E-value=30 Score=29.93 Aligned_cols=108 Identities=12% Similarity=0.021 Sum_probs=57.1
Q ss_pred ECCEEEEEecCcceEEEEECCCC--CeeeccC--CCC---CCceEEEcCeEEEEe---CcEEEEecCCc--eEEeccchh
Q 019186 207 IGGKVHVLHKGLSTVQVLDHMGL--GWTVEDY--GWL---QGPMAIVHDSVYLMS---HGLIIKQHRDV--RKVVASASE 274 (345)
Q Consensus 207 ~~~~iyv~gG~~~~i~~yd~~~~--~W~~~~~--~~~---~~~~~~~~~~l~~~~---~~~i~~~d~~~--W~~~~~~p~ 274 (345)
.++.+|+.. ....++++|.+++ +|+.-.. .+. .......++.+|+.. .+.++.++.++ |+.--.++.
T Consensus 9 ~~~~V~v~t-~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 9 LSDILIAAD-VEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEEE-TTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred eCCEEEEEe-CCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 445566555 5677899998776 6886543 111 000111255777764 38999999876 433222331
Q ss_pred hc---ccceeEEEEE-------CCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEc
Q 019186 275 FR---RRIGFAMIGM-------GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 327 (345)
Q Consensus 275 ~~---~r~~~~~~~~-------~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v 327 (345)
.. +....+.-++ .+..+++|+.++ .++..|..+++..|..-
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g------------~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRT------------IMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEE------------EEEEEETTTCCEEEEES
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCC------------EEEEEECCCCcEEEEEe
Confidence 11 1110111112 445555665443 46778887776677654
No 303
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=60.56 E-value=32 Score=32.54 Aligned_cols=134 Identities=13% Similarity=0.168 Sum_probs=72.2
Q ss_pred EEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCC----------CcccCCCCCCCceeeeeeE-eCCeEEE
Q 019186 96 GVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR----------QWSPRASMLVPRAMFACCA-LKEKIVV 164 (345)
Q Consensus 96 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~----------~W~~~~~~~~~r~~~~~~~-~~~~iyv 164 (345)
+++...+++|+|-|. .+|+++.... .|..++ .. -.++... .++++|+
T Consensus 448 Ait~~rg~~yfFKg~------------------~yWr~~~~~~~~~~P~~Is~~wp~LP---~~-IDAA~~~~~~~k~yF 505 (631)
T 1ck7_A 448 GIAQIRGEIFFFKDR------------------FIWRTVTPRDKPMGPLLVATFWPELP---EK-IDAVYEAPQEEKAVF 505 (631)
T ss_dssp EEEECSSSEEEECSS------------------EEEEESCTTSCCEEEEEGGGTCTTSC---SS-CSBCCEETTTTEEEE
T ss_pred eeEecCCcEEEEcCC------------------EEEEEcCCCCCCCCceeccccCCCCC---cc-ceEEEEECCCCEEEE
Confidence 456678999999774 4677765432 233332 11 1111111 2678999
Q ss_pred EcCcCCCCCCCceEEEEeCCCC--ce-EeCCC--CCccCCCce-eEEE--ECCEEEEEecCcceEEEEECCCCC------
Q 019186 165 AGGFTSCRKSISQAEMYDPEKD--VW-VPIPD--LHRTHNSAC-TGVV--IGGKVHVLHKGLSTVQVLDHMGLG------ 230 (345)
Q Consensus 165 ~gG~~~~~~~~~~v~~yd~~~~--~W-~~~~~--~~~~~~~~~-~~~~--~~~~iyv~gG~~~~i~~yd~~~~~------ 230 (345)
+-|. ..++|+..+- -+ +.+.. +|.. .... ++.. .++++|++-| +..++||..+++
T Consensus 506 FkG~--------~yWry~~~~l~~GYPk~Is~~G~P~~-~~~IDAAf~~~~~gktYFFkG--~~ywryd~~~~~vd~gYP 574 (631)
T 1ck7_A 506 FAGN--------EYWIYSASTLERGYPKPLTSLGLPPD-VQRVDAAFNWSKNKKTYIFAG--DKFWRYNEVKKKMDPGFP 574 (631)
T ss_dssp EETT--------EEEEEETTEECTTCCEEGGGGTCCTT-CCCCCBCCCCTTTCEEEEEET--TEEEEEETTTTEECTTCC
T ss_pred EecC--------EEEEECCCccccCCCccchhcCCCCC-CCcceeEEEecCCCeEEEEEC--CEEEEEcCCcccccCCCC
Confidence 9763 3788875210 00 11111 1211 0011 1222 3689999975 578899976542
Q ss_pred ------eeeccCCCCCCceEEE---cCeEEEEeCcEEEEecCCc
Q 019186 231 ------WTVEDYGWLQGPMAIV---HDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 231 ------W~~~~~~~~~~~~~~~---~~~l~~~~~~~i~~~d~~~ 265 (345)
|.-++ ...-++.. +|.+|++.+..-++||...
T Consensus 575 k~i~~~w~G~p---~~iDAAf~~~~~g~~YFFkG~~Ywr~d~~~ 615 (631)
T 1ck7_A 575 KLIADAWNAIP---DNLDAVVDLQGGGHSYFFKGAYYLKLENQS 615 (631)
T ss_dssp EETTTSCSSCC---TTCCEEECCTTSCBCEEEETTEEECCBTTB
T ss_pred cchHhhcCCCC---CCCcEeEEEcCCCeEEEEECCEEEEEeCcc
Confidence 22221 11222322 3799999999999998755
No 304
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=59.87 E-value=83 Score=26.96 Aligned_cols=71 Identities=14% Similarity=0.229 Sum_probs=43.5
Q ss_pred cCeEEEEeC------------cEEEEecCCceEEeccchhhcccceeEEEEE-CC-eEEEEcceecCCCCcccccccCce
Q 019186 247 HDSVYLMSH------------GLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GD-DIYVIGGVIGPDRWNWDIKPMSDV 312 (345)
Q Consensus 247 ~~~l~~~~~------------~~i~~~d~~~W~~~~~~p~~~~r~~~~~~~~-~~-~l~i~GG~~~~~~~~~~~~~~~~v 312 (345)
++++|+... ..+..+|.++.+.+..++. .. ..+++.- ++ .||+.++ +.|
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~--~~-p~~ia~spdg~~l~v~n~--------------~~v 327 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG--RD-ALSMTIDQQRNLMLTLDG--------------GNV 327 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC--TT-CCEEEEETTTTEEEEECS--------------SCE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec--CC-eeEEEECCCCCEEEEeCC--------------CeE
Confidence 378888742 4899999999888877763 23 4555443 44 5555432 278
Q ss_pred eeeccCCCCCceeEcCCC-CCccee
Q 019186 313 DVLTVGAERPTWRQVSPM-TRCRGT 336 (345)
Q Consensus 313 ~~yd~~~~~~~W~~v~~~-~~~r~~ 336 (345)
.+||..+. +=+.+..+ +..+..
T Consensus 328 ~v~D~~t~--~l~~~~~i~~~G~~P 350 (361)
T 2oiz_A 328 NVYDISQP--EPKLLRTIEGAAEAS 350 (361)
T ss_dssp EEEECSSS--SCEEEEEETTSCSSE
T ss_pred EEEECCCC--cceeeEEeccCCCCc
Confidence 89998764 21555553 444443
No 305
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=59.10 E-value=47 Score=29.73 Aligned_cols=110 Identities=9% Similarity=-0.059 Sum_probs=62.6
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE-CCEEEEEec---------CcceEEEEECCC
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GGKVHVLHK---------GLSTVQVLDHMG 228 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~gG---------~~~~i~~yd~~~ 228 (345)
..++|+.-..... . .+.+.++|+.+.+=. ..++.. ....-.+.- +..+|+..- ..+.+..+|+.+
T Consensus 84 ~~~vyV~n~~~~~-~-~~~VsVID~~t~~vv--~~I~vG-~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 84 ARRVYIQDPAHFA-A-ITQQFVIDGSTGRIL--GMTDGG-FLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp TTEEEEEECTTTC-S-SEEEEEEETTTTEEE--EEEEEC-SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCEEEEECCCcCC-C-CCeEEEEECCCCEEE--EEEECC-CCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 3567877543211 1 178999999887633 223333 222111122 445888741 356799999998
Q ss_pred CCeee---cc-C-----CCCCCceEE-E-cCeEEEEeC---cEEEEecCCceEEeccch
Q 019186 229 LGWTV---ED-Y-----GWLQGPMAI-V-HDSVYLMSH---GLIIKQHRDVRKVVASAS 273 (345)
Q Consensus 229 ~~W~~---~~-~-----~~~~~~~~~-~-~~~l~~~~~---~~i~~~d~~~W~~~~~~p 273 (345)
++=.. ++ . ...+..++. . +..+|+.+. +.+..+|..+.+.+..++
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 86432 22 0 011233333 2 347888763 689999999977776665
No 306
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=57.77 E-value=96 Score=27.00 Aligned_cols=138 Identities=7% Similarity=-0.053 Sum_probs=74.0
Q ss_pred EEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCC---------CcccCCCCCCCceeeeeeE-eCCeEEEE
Q 019186 96 GVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR---------QWSPRASMLVPRAMFACCA-LKEKIVVA 165 (345)
Q Consensus 96 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~---------~W~~~~~~~~~r~~~~~~~-~~~~iyv~ 165 (345)
+++..++++|+|=|. .+|+++.... .|..+ |.. -..+... .++++|++
T Consensus 185 Av~~~~g~~~fFkg~------------------~~Wr~~~~~~~~~p~~I~~~wpgL---P~~-iDAa~~~~~~g~~~fF 242 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR------------------FFWLKVSERPKTSVNLISSLWPTL---PSG-IEAAYEIEARNQVFLF 242 (365)
T ss_dssp CEEEETTEEEEEETT------------------EEEECCSSCCCCCEEEHHHHCSSC---CSS-CCEEEEEGGGTEEEEE
T ss_pred eEEEcCCeEEEEeCC------------------EEEEEcCCCccCCccchhhhccCC---CCC-ccEEEEecCCCEEEEE
Confidence 355579999999764 4667665432 13333 321 1222222 37899999
Q ss_pred cCcCCCCCCCceEEEEeCCCCc--e-EeCCC--CCccCCCceeEEEE--CCEEEEEecCcceEEEEECCCCCeee-----
Q 019186 166 GGFTSCRKSISQAEMYDPEKDV--W-VPIPD--LHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTV----- 233 (345)
Q Consensus 166 gG~~~~~~~~~~v~~yd~~~~~--W-~~~~~--~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~~~~W~~----- 233 (345)
-|. ..++|+..+.. + +.+.. +|.....--++... ++++|++-| +..++||..+++-..
T Consensus 243 kg~--------~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--~~yw~yd~~~~~v~~gyPk~ 312 (365)
T 3ba0_A 243 KDD--------KYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--NQYWRYDERRQMMDPGYPKL 312 (365)
T ss_dssp ETT--------EEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--TEEEEEETTTTEECSSCCCC
T ss_pred eCC--------EEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--CEEEEEeCCcceecCCCCcc
Confidence 763 26666643211 1 22332 23210011233333 579999975 678899976553221
Q ss_pred c----cCCCC-CCceEEE-cCeEEEEeCcEEEEecCCc
Q 019186 234 E----DYGWL-QGPMAIV-HDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 234 ~----~~~~~-~~~~~~~-~~~l~~~~~~~i~~~d~~~ 265 (345)
+ +..+. .-++... ++++|++.+...+.||..+
T Consensus 313 I~~~f~g~p~~iDaA~~~~~g~~YfFkg~~ywr~d~~~ 350 (365)
T 3ba0_A 313 ITKNFQGIGPKIDAVFYSKNKYYYFFQGSNQFEYDFLL 350 (365)
T ss_dssp HHHHSTTCCSSCSEEEEETTTEEEEEETTEEEEEETTT
T ss_pred hhhcCCCCCCccceeeEecCCcEEEEeCCEEEEEECCc
Confidence 0 11111 1222223 7889999998889998766
No 307
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=57.75 E-value=71 Score=25.49 Aligned_cols=97 Identities=10% Similarity=0.043 Sum_probs=52.7
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCc--e-EeCCC--CCccCCCceeEEE--ECCEEEEEecCcceEEEEECCCCCe
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDV--W-VPIPD--LHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGW 231 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~--W-~~~~~--~~~~~~~~~~~~~--~~~~iyv~gG~~~~i~~yd~~~~~W 231 (345)
++++|++-|. ..++||..+-. + +.+.. +|.....--++.. .++++|++-| +..++||..+++-
T Consensus 87 ~~k~yfFkG~--------~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--~~ywr~d~~~~~v 156 (218)
T 1gen_A 87 EEKAVFFAGN--------EYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--DKFWRYNEVKKKM 156 (218)
T ss_dssp TTEEEEEETT--------EEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--TEEEEEETTTTEE
T ss_pred CCEEEEEeCC--------EEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--CEEEEEECccccc
Confidence 6899999773 37888842110 0 11111 2211001123333 3689999975 6788999876532
Q ss_pred ee-----cc----CCCCC-CceEEE--cCeEEEEeCcEEEEecCCc
Q 019186 232 TV-----ED----YGWLQ-GPMAIV--HDSVYLMSHGLIIKQHRDV 265 (345)
Q Consensus 232 ~~-----~~----~~~~~-~~~~~~--~~~l~~~~~~~i~~~d~~~ 265 (345)
.. +. ..+.. .++... +|.+|.+.+...+.||..+
T Consensus 157 ~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~~y~~~~~~~ 202 (218)
T 1gen_A 157 DPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 202 (218)
T ss_dssp CSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEETTEEEEEETTE
T ss_pred cCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEECCEEEEEECCc
Confidence 11 10 11111 222222 3889999998888888765
No 308
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=56.93 E-value=97 Score=26.83 Aligned_cols=156 Identities=10% Similarity=0.036 Sum_probs=86.4
Q ss_pred CcEEEEEecCC--CCeEEEEeCCCCCEEeCCCCC---ccccc------cceeEEEEE----CCEEEEEcCCCCCCCCCCC
Q 019186 55 ENLLCVCAFDP--ENLWQLYDPLRDLWITLPVLP---SKIRH------LAHFGVVST----AGKLFVLGGGSDAVDPLTG 119 (345)
Q Consensus 55 ~~~l~v~gg~~--~~~~~~yd~~~~~W~~~~~~~---~~~~~------~~~~~~~~~----~~~lyv~GG~~~~~~~~~~ 119 (345)
.+.||+.+... ...++..+-...+|+.+.... ..... ..-.+++.. ++.||+.+.
T Consensus 67 ~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~---------- 136 (394)
T 3b7f_A 67 PERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS---------- 136 (394)
T ss_dssp TTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE----------
T ss_pred CCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec----------
Confidence 56788776421 125777777778999886421 11000 011234443 567877652
Q ss_pred CCCCCcCcCceEEEeCCCCCcccCCCC---CC--------------CceeeeeeEe---CCeEEEEcCcCCCCCCCceEE
Q 019186 120 DQDGSFATNEVWSYDPVTRQWSPRASM---LV--------------PRAMFACCAL---KEKIVVAGGFTSCRKSISQAE 179 (345)
Q Consensus 120 ~~~~~~~~~~~~~yd~~t~~W~~~~~~---~~--------------~r~~~~~~~~---~~~iyv~gG~~~~~~~~~~v~ 179 (345)
...+++.+-...+|+.+... +. ....+.+++- .+.||+.... ..++
T Consensus 137 -------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~ 202 (394)
T 3b7f_A 137 -------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVF 202 (394)
T ss_dssp -------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEE
T ss_pred -------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEE
Confidence 23588888888899887431 11 1112333332 3567765421 2377
Q ss_pred EEeCCCCceEeCCCC------CccC----CCceeEEEE-C--CEEEEEecCcceEEEEECCCCCeeeccC
Q 019186 180 MYDPEKDVWVPIPDL------HRTH----NSACTGVVI-G--GKVHVLHKGLSTVQVLDHMGLGWTVEDY 236 (345)
Q Consensus 180 ~yd~~~~~W~~~~~~------~~~~----~~~~~~~~~-~--~~iyv~gG~~~~i~~yd~~~~~W~~~~~ 236 (345)
..+....+|+.+..- |... ...+.++.. + +.||+.. ...+++.+-...+|+.+..
T Consensus 203 ~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 203 ESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp EESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTTTEEECGGG
T ss_pred EECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCCCcceECCC
Confidence 777777899987531 1110 112233332 1 6777754 3558888888889998854
No 309
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=56.59 E-value=1.4e+02 Score=28.67 Aligned_cols=158 Identities=11% Similarity=0.032 Sum_probs=81.3
Q ss_pred CcEEEEEec-CCCCeEEEEeCCCC--CE--EeCCCCCccccccceeEEE-EECCEEEEEcCCCCCCCCCCCCCCCCcCcC
Q 019186 55 ENLLCVCAF-DPENLWQLYDPLRD--LW--ITLPVLPSKIRHLAHFGVV-STAGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (345)
Q Consensus 55 ~~~l~v~gg-~~~~~~~~yd~~~~--~W--~~~~~~~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 128 (345)
+..|++... ...+.++++|..+. ++ +.+.+-.. ...++.. ..++.||+....... ...
T Consensus 282 g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~----~~~~s~~~~~g~~l~~~t~~~~a------------~~~ 345 (751)
T 2xe4_A 282 TNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK----GVRYDVQMHGTSHLVILTNEGGA------------VNH 345 (751)
T ss_dssp SSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT----TCCEEEEEETTTEEEEEECTTTC------------TTC
T ss_pred CCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC----CceEEEeeeeCCEEEEEeCCCCC------------CCc
Confidence 444444433 23567888998765 45 55543221 1223333 336778888654211 235
Q ss_pred ceEEEeCCC-CCccc-CCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeC-------CCCc-eEeCCCCCccC
Q 019186 129 EVWSYDPVT-RQWSP-RASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDP-------EKDV-WVPIPDLHRTH 198 (345)
Q Consensus 129 ~~~~yd~~t-~~W~~-~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~-------~~~~-W~~~~~~~~~~ 198 (345)
.++++|..+ ..|+. +-.......-......++.|++..-.++ ...++++|+ .+.. -+.+. ++..
T Consensus 346 ~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~- 419 (751)
T 2xe4_A 346 KLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG----LTRIWTMMADSQDGVFKAGTGLREVV-MEEP- 419 (751)
T ss_dssp EEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT----EEEEEEEECCTTTSCCCTTTCCEECC-CCCS-
T ss_pred EEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC----EEEEEEEecccccccccCCccceEEC-CCCc-
Confidence 789999876 67876 3222222222334445777776653322 457888986 3333 34442 3332
Q ss_pred CCceeEE------EEC-CEEEEE-ec--CcceEEEEECCCCCeeecc
Q 019186 199 NSACTGV------VIG-GKVHVL-HK--GLSTVQVLDHMGLGWTVED 235 (345)
Q Consensus 199 ~~~~~~~------~~~-~~iyv~-gG--~~~~i~~yd~~~~~W~~~~ 235 (345)
.. ...+ ..+ +.+++. .. ....++.||+.+++.+.+.
T Consensus 420 ~~-~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 420 IF-TVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp SC-EEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEE
T ss_pred ee-EEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 11 1111 112 334333 33 3467888998887766553
No 310
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.18 E-value=14 Score=23.54 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=22.4
Q ss_pred CCCChHHHHHHhhccCCCcchhhHHHhhHH
Q 019186 5 IEGLPDAVALRCLARVPFFLHPKLELVSRS 34 (345)
Q Consensus 5 ~~~lp~~~~~~~l~~~p~~~~~~~~~~~~~ 34 (345)
+|++|++|+.+|+..-...-.......++.
T Consensus 21 FPEvPd~VVsqc~~qN~~Nl~aC~~~L~qE 50 (75)
T 2dae_A 21 FPEVPEVVVSRCMLQNNNNLDACCAVLSQE 50 (75)
T ss_dssp SSSSCHHHHHHHHTTTTSCSHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHhccCHHHHHHHHHHh
Confidence 689999999999998766555555554444
No 311
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=52.98 E-value=97 Score=27.41 Aligned_cols=60 Identities=17% Similarity=0.003 Sum_probs=33.7
Q ss_pred CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEE-EECCEEEEEecCcceEEEEECC
Q 019186 160 EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGGKVHVLHKGLSTVQVLDHM 227 (345)
Q Consensus 160 ~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~iyv~gG~~~~i~~yd~~ 227 (345)
+.+++.++.++ .+.+||..+..-.. ...... ....+++ .-+++.++.|+....+..||++
T Consensus 162 ~~~las~s~Dg------~v~iwD~~~~~~~~-~~~~~~-~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 162 PSMVAVCLADG------SIAVLQVTETVKVC-ATLPST-VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp TTEEEEEETTS------CEEEEEESSSEEEE-EEECGG-GCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCEEEEEECCC------eEEEEEcCCCccee-eccCCC-CceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 56777776543 38889988763211 111111 1111222 2256666777667789999987
No 312
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=51.84 E-value=66 Score=27.99 Aligned_cols=23 Identities=9% Similarity=0.322 Sum_probs=13.8
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCc
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDV 187 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~ 187 (345)
++.+++.|+.++ .+.+||..+..
T Consensus 39 ~g~~la~g~~dg------~v~iw~~~~~~ 61 (447)
T 3dw8_B 39 SGELLATGDKGG------RVVIFQQEQEN 61 (447)
T ss_dssp SSSEEEEEETTS------EEEEEEECC--
T ss_pred CCCEEEEEcCCC------eEEEEEecCCC
Confidence 566777776542 47788876544
No 313
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=50.03 E-value=1.1e+02 Score=25.41 Aligned_cols=174 Identities=9% Similarity=-0.046 Sum_probs=83.6
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRAS 145 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 145 (345)
...++++|..+++-..+ . .......+-+|+.+++....... ....++++|..+++..++..
T Consensus 42 ~~~l~~~d~~~~~~~~l-----~---~~~~~~~SpDg~~la~~~~~~~~-----------~~~~l~~~~~~~g~~~~l~~ 102 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-----E---NATMPRISPDGKKIAFMRANEEK-----------KVSEIWVADLETLSSKKILE 102 (347)
T ss_dssp EEEEEEEETTTCCEEEE-----E---SCEEEEECTTSSEEEEEEEETTT-----------TEEEEEEEETTTTEEEEEEE
T ss_pred cceEEEEeCCCCceEEc-----c---cCCCeEECCCCCEEEEEEeccCC-----------CcceEEEEECCCCceEEEEc
Confidence 45688889888776555 1 11111222255544443321100 23568999998877655433
Q ss_pred CCCCceeeeeeEe-CCeEEEEcCcCC----------------CC-----CCCceEEEEeCCCCce-EeCCCCCccCCCce
Q 019186 146 MLVPRAMFACCAL-KEKIVVAGGFTS----------------CR-----KSISQAEMYDPEKDVW-VPIPDLHRTHNSAC 202 (345)
Q Consensus 146 ~~~~r~~~~~~~~-~~~iyv~gG~~~----------------~~-----~~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~ 202 (345)
.+. ....... +++.+++..... .+ .....++++|..+.+. +.+.. + . . ..
T Consensus 103 ~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~-~-~~ 175 (347)
T 2gop_A 103 AKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R-F-SS 175 (347)
T ss_dssp ESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T-T-CE
T ss_pred CCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C-c-cc
Confidence 222 2222222 554333332110 00 1135688999988876 55443 2 2 1 12
Q ss_pred eEEEECCEEEEEecC---------cceEEEEECCCCCeeeccCCCCCCceEEEcCe-EEEEeC---------cEEEEecC
Q 019186 203 TGVVIGGKVHVLHKG---------LSTVQVLDHMGLGWTVEDYGWLQGPMAIVHDS-VYLMSH---------GLIIKQHR 263 (345)
Q Consensus 203 ~~~~~~~~iyv~gG~---------~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-l~~~~~---------~~i~~~d~ 263 (345)
....-++ +++.+.. ...++.+| +++++.+... ........+|+ |++.+. ..++.+|.
T Consensus 176 ~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~ 251 (347)
T 2gop_A 176 GIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYDG 251 (347)
T ss_dssp EEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEECS
T ss_pred ccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEECC
Confidence 2223345 5554421 34677888 6666655332 21111244554 444442 37888882
Q ss_pred CceEEe
Q 019186 264 DVRKVV 269 (345)
Q Consensus 264 ~~W~~~ 269 (345)
.+++.+
T Consensus 252 ~~~~~l 257 (347)
T 2gop_A 252 KEVMGI 257 (347)
T ss_dssp SCEEES
T ss_pred CceEec
Confidence 225544
No 314
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=48.89 E-value=1.3e+02 Score=25.96 Aligned_cols=28 Identities=7% Similarity=-0.191 Sum_probs=20.5
Q ss_pred ECCEEEEEecCcceEEEEECCCCCeeec
Q 019186 207 IGGKVHVLHKGLSTVQVLDHMGLGWTVE 234 (345)
Q Consensus 207 ~~~~iyv~gG~~~~i~~yd~~~~~W~~~ 234 (345)
-++..++.|+....+..||..+++-..+
T Consensus 352 ~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 352 GSDSVVMTGSYNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp TTSSEEEEECSTTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEeccCCEEEEEEcCCCcceee
Confidence 3566667777778899999988766543
No 315
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=48.30 E-value=1.4e+02 Score=26.12 Aligned_cols=17 Identities=6% Similarity=0.223 Sum_probs=12.2
Q ss_pred ceeEEEEE-CCeEEEEcc
Q 019186 279 IGFAMIGM-GDDIYVIGG 295 (345)
Q Consensus 279 ~~~~~~~~-~~~l~i~GG 295 (345)
..|.++.. +++||.+|-
T Consensus 338 ~~hs~alt~~G~v~~wG~ 355 (406)
T 4d9s_A 338 WRHTLAVTERNNVFAWGR 355 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEecC
Confidence 44666655 678999984
No 316
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=48.24 E-value=1.5e+02 Score=26.44 Aligned_cols=119 Identities=13% Similarity=0.171 Sum_probs=74.0
Q ss_pred CCCCccc--CCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEE-EeCCC-----C-ceEeCCCCCccCCCceeEEE
Q 019186 136 VTRQWSP--RASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEM-YDPEK-----D-VWVPIPDLHRTHNSACTGVV 206 (345)
Q Consensus 136 ~t~~W~~--~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~-yd~~~-----~-~W~~~~~~~~~~~~~~~~~~ 206 (345)
....|++ ++.++..-.-|+.|.+++.-|++|=..+. ...+++-. |-+.. . .=+.++.--.+.....++-.
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGD-v~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGD-VAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECS-SSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred ccCCceecccccccceeeeeeeeEecCCceEEEeccCC-CCcceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 3456764 45556556678889998888888754433 23344433 32211 0 11223222111134556678
Q ss_pred ECCEEEEEec------CcceEEEEECCCCCeeeccCCCC----CCceEEEcCeEEEEeC
Q 019186 207 IGGKVHVLHK------GLSTVQVLDHMGLGWTVEDYGWL----QGPMAIVHDSVYLMSH 255 (345)
Q Consensus 207 ~~~~iyv~gG------~~~~i~~yd~~~~~W~~~~~~~~----~~~~~~~~~~l~~~~~ 255 (345)
+++.||+..- ..+.+.+-+.....|..+.-... ....+.+++.||+++.
T Consensus 347 YdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 347 YDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp ETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred hCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 8999999853 44667788777888988743322 5678999999999995
No 317
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=45.77 E-value=1.4e+02 Score=25.28 Aligned_cols=176 Identities=7% Similarity=-0.082 Sum_probs=81.8
Q ss_pred CcEEEEEecCCCCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEe
Q 019186 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (345)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd 134 (345)
++.+.+.|+. ...+.++|..+++-...-..+ ..-.++....+.+++... ..+.+||
T Consensus 70 ~~~~~~~~~~-d~~v~iWd~~~~~~~~~~~~~-----~~v~~v~~~~~~~~~~~~------------------~~i~i~d 125 (355)
T 3vu4_A 70 TNYVAFVTGV-KEVVHIWDDVKKQDVSRIKVD-----APVKDLFLSREFIVVSYG------------------DVISVFK 125 (355)
T ss_dssp SSEEEEECSS-TTEEEEEETTTTEEEEEEECS-----SCEEEEEECSSEEEEEET------------------TEEEEEE
T ss_pred CCEEEEEECC-ccEEEEEECCCCcEEEEEECC-----CceEEEEEcCCEEEEEEc------------------CEEEEEE
Confidence 4445454543 358889998887543311111 122234444555555432 3588899
Q ss_pred CCCCCcccCCCCCCCceeeeeeEeCCeEEEE-cCcCCCCCCCceEEEEeCCCCc-eEe-------------CCCCCccCC
Q 019186 135 PVTRQWSPRASMLVPRAMFACCALKEKIVVA-GGFTSCRKSISQAEMYDPEKDV-WVP-------------IPDLHRTHN 199 (345)
Q Consensus 135 ~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~-gG~~~~~~~~~~v~~yd~~~~~-W~~-------------~~~~~~~~~ 199 (345)
..+. .+.+..+..+ ...++...+.+.+. |+.+ ..+.+||..+.. +.. +..+... .
T Consensus 126 ~~~~-~~~~~~~~~~--~~~~~~s~~~la~~sg~~~------g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~ 195 (355)
T 3vu4_A 126 FGNP-WKRITDDIRF--GGVCEFSNGLLVYSNEFNL------GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-T 195 (355)
T ss_dssp SSTT-CCBSSCCEEE--EEEEEEETTEEEEEESSCT------TCEEEEECCC------------------CCEEECCC-S
T ss_pred CCCC-ceeeEEeccC--CceEEEEccEEEEeCCCcC------cEEEEEECCCCCccccccccccccccCcccEEEEcc-C
Confidence 8765 1122222221 11112222333333 3333 348899988653 110 1111111 1
Q ss_pred CceeEEEE--CCEEEEEecCcce-EEEEECCCCCeee-ccC--CCC-CCceEE-EcCeEEEEeC--cEEEEecCC
Q 019186 200 SACTGVVI--GGKVHVLHKGLST-VQVLDHMGLGWTV-EDY--GWL-QGPMAI-VHDSVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 200 ~~~~~~~~--~~~iyv~gG~~~~-i~~yd~~~~~W~~-~~~--~~~-~~~~~~-~~~~l~~~~~--~~i~~~d~~ 264 (345)
.....+.. ++.+.+.|+...+ +..+|..+++-.. +.. ... ...++. .++++++.++ +.+..+|.+
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 22222222 6777777776676 9999998775432 221 111 111111 2555555554 567777654
No 318
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=45.38 E-value=34 Score=32.36 Aligned_cols=91 Identities=10% Similarity=0.042 Sum_probs=49.6
Q ss_pred eeEEEECCEEEEEecCcceEEEEECCCC----------CeeeccCCCCCCceEE-EcCeEEEEeCcEEEEecCCc----e
Q 019186 202 CTGVVIGGKVHVLHKGLSTVQVLDHMGL----------GWTVEDYGWLQGPMAI-VHDSVYLMSHGLIIKQHRDV----R 266 (345)
Q Consensus 202 ~~~~~~~~~iyv~gG~~~~i~~yd~~~~----------~W~~~~~~~~~~~~~~-~~~~l~~~~~~~i~~~d~~~----W 266 (345)
-++...++++|++=| ..+++++.... .|..++.. ..++... .++++|++-+...+.|+..+ +
T Consensus 447 DAit~~rg~~yfFKg--~~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG~~yWry~~~~l~~GY 523 (631)
T 1ck7_A 447 DGIAQIRGEIFFFKD--RFIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAGNEYWIYSASTLERGY 523 (631)
T ss_dssp SEEEECSSSEEEECS--SEEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEETTEEEEEETTEECTTC
T ss_pred ceeEecCCcEEEEcC--CEEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEecCEEEEECCCccccCC
Confidence 355667889999864 45666665432 23322210 1222222 26789999999999998643 1
Q ss_pred -EEecc--chhhcccceeEEE-EECCeEEEEcc
Q 019186 267 -KVVAS--ASEFRRRIGFAMI-GMGDDIYVIGG 295 (345)
Q Consensus 267 -~~~~~--~p~~~~r~~~~~~-~~~~~l~i~GG 295 (345)
+.+.. +|....+.-.++. ..++++|+|-|
T Consensus 524 Pk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG 556 (631)
T 1ck7_A 524 PKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG 556 (631)
T ss_dssp CEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET
T ss_pred CccchhcCCCCCCCcceeEEEecCCCeEEEEEC
Confidence 11221 2211123333333 13688999976
No 319
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=44.52 E-value=1.6e+02 Score=25.54 Aligned_cols=175 Identities=9% Similarity=-0.039 Sum_probs=0.0
Q ss_pred ceEEEeCC--CCCcccCCCCC-----CCceeeeeeEeC---CeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccC
Q 019186 129 EVWSYDPV--TRQWSPRASML-----VPRAMFACCALK---EKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTH 198 (345)
Q Consensus 129 ~~~~yd~~--t~~W~~~~~~~-----~~r~~~~~~~~~---~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~ 198 (345)
.+++||+. +.+-+++.... ..-.-|++.+.. +.++++=-........-++..+|+.+.....+.......
T Consensus 84 ~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~ 163 (355)
T 3sre_A 84 KILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL 163 (355)
T ss_dssp EEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTT
T ss_pred eEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCC
Q ss_pred CCceeEEEE--CCEEEEEec-----------------CcceEEEEECCCCCeeeccCCCCCCceEEE---cCeEEEEeC-
Q 019186 199 NSACTGVVI--GGKVHVLHK-----------------GLSTVQVLDHMGLGWTVEDYGWLQGPMAIV---HDSVYLMSH- 255 (345)
Q Consensus 199 ~~~~~~~~~--~~~iyv~gG-----------------~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~---~~~l~~~~~- 255 (345)
.....-+.+ +|.+|+.+. ....+++||+ ++.+.+......+..... +..+|+.+.
T Consensus 164 ~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~ 241 (355)
T 3sre_A 164 LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELL 241 (355)
T ss_dssp CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCC
Q ss_pred -cEEEEecCCc---eEEeccchhhcccceeEEEEEC--CeEEEEcceecCCCCcccccccCceeeeccC
Q 019186 256 -GLIIKQHRDV---RKVVASASEFRRRIGFAMIGMG--DDIYVIGGVIGPDRWNWDIKPMSDVDVLTVG 318 (345)
Q Consensus 256 -~~i~~~d~~~---W~~~~~~p~~~~r~~~~~~~~~--~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~ 318 (345)
..|+.|+.+. ........ .....-+++.-. |.+|+..+..+. .|.+|||+
T Consensus 242 ~~~I~~~~~~~~g~l~~~~~~~--~~g~PDGi~vD~e~G~lwva~~~~g~-----------~v~~~~P~ 297 (355)
T 3sre_A 242 AHKIHVYEKHANWTLTPLRVLS--FDTLVDNISVDPVTGDLWVGCHPNGM-----------RIFFYDAE 297 (355)
T ss_dssp GTEEEEEEECTTSCEEEEEEEE--CSSEEEEEEECTTTCCEEEEEESCHH-----------HHHSCCTT
T ss_pred CCeEEEEEECCCCcEecCEEEe--CCCCCceEEEeCCCCcEEEEecCCce-----------EEEEECCC
No 320
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=44.36 E-value=1.9e+02 Score=28.54 Aligned_cols=25 Identities=4% Similarity=-0.174 Sum_probs=19.4
Q ss_pred CCEEEEEecCcceEEEEECCCCCee
Q 019186 208 GGKVHVLHKGLSTVQVLDHMGLGWT 232 (345)
Q Consensus 208 ~~~iyv~gG~~~~i~~yd~~~~~W~ 232 (345)
++..++.|+.-..+..||.++++-.
T Consensus 222 dg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 222 NSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp TSSEEEEEETTCCEEEEETTTCCEE
T ss_pred CCCEEEEEECCCeEEEEECCCCcEE
Confidence 6777777777778999999887653
No 321
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=40.49 E-value=2.5e+02 Score=26.87 Aligned_cols=230 Identities=9% Similarity=0.070 Sum_probs=114.5
Q ss_pred CCCEEeCCCCCccccccceeEEEEE---CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCc--
Q 019186 76 RDLWITLPVLPSKIRHLAHFGVVST---AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPR-- 150 (345)
Q Consensus 76 ~~~W~~~~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r-- 150 (345)
..+|+.+.+-... -.-.++++. .+.||+... ...+++.+-..++|+.+.+.+...
T Consensus 10 ~~~w~~~~~~~~~---g~i~~i~~~p~~~~~~~~~~~-----------------~ggv~rS~D~G~tW~~i~~~~~~~~~ 69 (737)
T 2cn3_A 10 PYKWDNVVIGGGG---GFMPGIVFNETEKDLIYARAA-----------------IGGAYRWDPSTETWIPLLDHFQMDEY 69 (737)
T ss_dssp CEEEEEECCCSBC---SCCCEEEECSSSTTCEEEECS-----------------SSCEEEEETTTTEEEECCTTCCGGGG
T ss_pred CCeeEEcccCCCc---ceeeEEEECCCCCCEEEEEec-----------------CCcEEEeCCCCCCEEECcCccCcccc
Confidence 4578888653321 133345554 256777542 235999998899999986633211
Q ss_pred --e-eeeeeEe---CCeEEEEcCcCCCCCC--CceEEEEeCCCCceEeCCCC-Cc----cCC-CceeEEEE---CCEEEE
Q 019186 151 --A-MFACCAL---KEKIVVAGGFTSCRKS--ISQAEMYDPEKDVWVPIPDL-HR----THN-SACTGVVI---GGKVHV 213 (345)
Q Consensus 151 --~-~~~~~~~---~~~iyv~gG~~~~~~~--~~~v~~yd~~~~~W~~~~~~-~~----~~~-~~~~~~~~---~~~iyv 213 (345)
. ..++++- .+.+|+..+....... ...++.=.-.-.+|+.+... +. +.+ ....++.. .+.+|+
T Consensus 70 ~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~ 149 (737)
T 2cn3_A 70 SYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYL 149 (737)
T ss_dssp GGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEE
T ss_pred cCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEE
Confidence 1 2233332 3688887653110000 12233333334579877431 11 101 12333332 255666
Q ss_pred EecCcceEEEEECCCCCeeeccCCCCC-----------------CceEEEc----------CeEEEEeC----cEEEEec
Q 019186 214 LHKGLSTVQVLDHMGLGWTVEDYGWLQ-----------------GPMAIVH----------DSVYLMSH----GLIIKQH 262 (345)
Q Consensus 214 ~gG~~~~i~~yd~~~~~W~~~~~~~~~-----------------~~~~~~~----------~~l~~~~~----~~i~~~d 262 (345)
.......+++=+=.-.+|+.+...+.. .....++ +.||+-.. ......|
T Consensus 150 g~~~g~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~D 229 (737)
T 2cn3_A 150 GTRCGNGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTD 229 (737)
T ss_dssp ECSTTCCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESS
T ss_pred eeccCCcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcC
Confidence 431113454432234589988643321 1112231 26777542 2333445
Q ss_pred CCc-eEEeccchhhcccceeEEEEE-CCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCCC
Q 019186 263 RDV-RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTR 332 (345)
Q Consensus 263 ~~~-W~~~~~~p~~~~r~~~~~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~ 332 (345)
... |+++..+|. ....+.++.- ++.+|+..+....... ......++.++.... +|+++.+.|.
T Consensus 230 gG~tW~~~~~~p~--~~~~~~~~~~~~~~l~~~~~d~~g~y~---~~~~g~v~~s~d~G~--tW~~i~~~~~ 294 (737)
T 2cn3_A 230 GGVTWKAVPGQPK--GLLPHHGVLASNGMLYITYGDTCGPYD---GNGKGQVWKFNTRTG--EWIDITPIPY 294 (737)
T ss_dssp TTSCCEECTTCCC--SSEEEEEEECTTSEEEEEEESSCCSSC---CSCCEEEEEEETTTC--CEEECCSSCT
T ss_pred CCCceEECCCCCC--cccceEEEECCCCeEEEEecCCCCccc---cccCceEEEEeCCCC--CEEEccCCCC
Confidence 444 999986662 2222333322 6788887542110000 002246888888887 9999987664
No 322
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=39.58 E-value=1.8e+02 Score=24.92 Aligned_cols=135 Identities=13% Similarity=0.074 Sum_probs=66.4
Q ss_pred EEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCC---cccCCCCCCCcee-eeeeEe-CC-eEEEEcCcC
Q 019186 97 VVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQ---WSPRASMLVPRAM-FACCAL-KE-KIVVAGGFT 169 (345)
Q Consensus 97 ~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~r~~-~~~~~~-~~-~iyv~gG~~ 169 (345)
+++. +|.+||.+... ...++++++.... |-.-.+....+.+ .+++.. ++ .|++..+ .
T Consensus 142 vavD~~GnaYVt~s~~---------------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~ 205 (334)
T 2p9w_A 142 SAQDRDGNSYVAFALG---------------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P 205 (334)
T ss_dssp EEECTTSCEEEEEEES---------------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S
T ss_pred eEECCCCCEEEeCCCC---------------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C
Confidence 4443 68899976541 1569999997653 4322222223333 355555 34 5666654 3
Q ss_pred CCCCCCceEEEEeCCCCce--EeCC--CCCccCCCceeE---EEECCEEEEEecCcceEEEEECCCCCeeecc------C
Q 019186 170 SCRKSISQAEMYDPEKDVW--VPIP--DLHRTHNSACTG---VVIGGKVHVLHKGLSTVQVLDHMGLGWTVED------Y 236 (345)
Q Consensus 170 ~~~~~~~~v~~yd~~~~~W--~~~~--~~~~~~~~~~~~---~~~~~~iyv~gG~~~~i~~yd~~~~~W~~~~------~ 236 (345)
..+..||..+-.. ..+. ..... ...... .-.+|++.++....+..+.+--..+ |.... .
T Consensus 206 ------g~L~~fD~~~pv~~~v~~~~~G~~~~-~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg-W~sa~~~g~~~~ 277 (334)
T 2p9w_A 206 ------RALTAFDVSKPYAWPEPVKINGDFGT-LSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN-WKSANIKKTKRS 277 (334)
T ss_dssp ------SSEEEEECSSSSCCCEECEESSCCCC-CTTEEEEEEEEETTEEEEEEEETTEEEEEECSST-TSEEEEEEEECG
T ss_pred ------CeEEEEcCCCCcceeecccccCCccc-ccCcccccccccCCEEEEEEcCCCCEEEEECCCC-cceeEEeeeecC
Confidence 3489999875332 1111 00001 112222 2368888555432233344433344 87642 1
Q ss_pred C--CC-CCceEE----EcCeEEEEeC
Q 019186 237 G--WL-QGPMAI----VHDSVYLMSH 255 (345)
Q Consensus 237 ~--~~-~~~~~~----~~~~l~~~~~ 255 (345)
. .. ....++ .+++||++..
T Consensus 278 ~~~~~g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 278 ELQNSGFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp GGGSSCEEEEEEEEETTEEEEEEEEC
T ss_pred ccccCceeEEEEeccccCCeEEEEee
Confidence 1 11 222223 5778888875
No 323
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=39.12 E-value=1.9e+02 Score=24.94 Aligned_cols=78 Identities=9% Similarity=-0.013 Sum_probs=46.7
Q ss_pred CCEEEEEec---------CcceEEEEECCCCCe-eeccCCCCCCceEE-EcCe--EEEEeC--cEEEEecCCceEEeccc
Q 019186 208 GGKVHVLHK---------GLSTVQVLDHMGLGW-TVEDYGWLQGPMAI-VHDS--VYLMSH--GLIIKQHRDVRKVVASA 272 (345)
Q Consensus 208 ~~~iyv~gG---------~~~~i~~yd~~~~~W-~~~~~~~~~~~~~~-~~~~--l~~~~~--~~i~~~d~~~W~~~~~~ 272 (345)
++++|+... ..+.+..+|+++++= ..++-......++. .+|+ +|+.+. +.+..+|.++++.+..+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 478999752 235799999988755 33322222233333 3454 676663 89999999998877663
Q ss_pred hhhcccceeEEEEE
Q 019186 273 SEFRRRIGFAMIGM 286 (345)
Q Consensus 273 p~~~~r~~~~~~~~ 286 (345)
. ...+..+++...
T Consensus 358 ~-~vG~~P~~~~~~ 370 (373)
T 2mad_H 358 V-ELGSGPQVLSVM 370 (373)
T ss_pred c-CCCCCCcEEEEc
Confidence 2 123444555444
No 324
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=38.41 E-value=2.5e+02 Score=26.26 Aligned_cols=111 Identities=6% Similarity=-0.146 Sum_probs=54.0
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEE-CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~ 144 (345)
...+.++|..+++-..+-..... ....-.+++.. +|+.++++...... ........++++|..+++-+.+.
T Consensus 36 dg~i~~~d~~~g~~~~~~~~~~~-~~~~v~~~~~SpDg~~l~~~~~~~~~-------~~~~~~~~i~~~d~~~~~~~~l~ 107 (723)
T 1xfd_A 36 KGTVRLWNVETNTSTVLIEGKKI-ESLRAIRYEISPDREYALFSYNVEPI-------YQHSYTGYYVLSKIPHGDPQSLD 107 (723)
T ss_dssp SSCEEEBCGGGCCCEEEECTTTT-TTTTCSEEEECTTSSEEEEEESCCCC-------SSSCCCSEEEEEESSSCCCEECC
T ss_pred CCCEEEEECCCCcEEEEeccccc-cccccceEEECCCCCEEEEEecCccc-------eeecceeeEEEEECCCCceEecc
Confidence 34788999988765443221110 00011233333 66655555432211 11113468999999988765554
Q ss_pred CCCCCce-eeeee-EeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeC
Q 019186 145 SMLVPRA-MFACC-ALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPI 191 (345)
Q Consensus 145 ~~~~~r~-~~~~~-~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~ 191 (345)
....... ....+ .=+++.++++.. ..++++|..+..-..+
T Consensus 108 ~~~~~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 108 PPEVSNAKLQYAGWGPKGQQLIFIFE-------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp CTTCCSCCCSBCCBCSSTTCEEEEET-------TEEEEESSSSSCCEEE
T ss_pred CCccccccccccEECCCCCEEEEEEC-------CeEEEEECCCCceEEE
Confidence 3322111 11112 225544444321 3588888877665444
No 325
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=36.53 E-value=2e+02 Score=24.60 Aligned_cols=105 Identities=11% Similarity=0.070 Sum_probs=50.2
Q ss_pred EEEEEecCCCCeEEEEeCCCCCEEe---CCCCCccccccceeEEEEE---------CCEEEEEcCCCCCCCCCCCCCCCC
Q 019186 57 LLCVCAFDPENLWQLYDPLRDLWIT---LPVLPSKIRHLAHFGVVST---------AGKLFVLGGGSDAVDPLTGDQDGS 124 (345)
Q Consensus 57 ~l~v~gg~~~~~~~~yd~~~~~W~~---~~~~~~~~~~~~~~~~~~~---------~~~lyv~GG~~~~~~~~~~~~~~~ 124 (345)
.+.+.|+ ....+.++|..+++-.. +..+... ...-.+++.. ++++++-||.+
T Consensus 102 ~~las~~-~d~~v~lw~~~~~~~~~~~~~~~~~gH--~~~v~~v~~~p~~~~~~~~d~~~las~s~D------------- 165 (393)
T 4gq1_A 102 LFLACVC-QDNTVRLIITKNETIITQHVLGGKSGH--HNFVNDIDIADVYSADNRLAEQVIASVGDD------------- 165 (393)
T ss_dssp EEEEEEE-TTSCEEEEEEETTEEEEEEEECTTTSC--SSCEEEEEEEEEECTTCSEEEEEEEEEETT-------------
T ss_pred CEEEEEe-CCCcEEEEECCCCccceeeeecccCCC--CCceEEEEEccccccccCCCCCEEEEEECC-------------
Confidence 3444443 34567888877765432 2333221 0111223332 56788888753
Q ss_pred cCcCceEEEeCCCCCcccCCCCCCCceeeeeeEe-CC-eEEEEcCcCCCCCCCceEEEEeCCCCc
Q 019186 125 FATNEVWSYDPVTRQWSPRASMLVPRAMFACCAL-KE-KIVVAGGFTSCRKSISQAEMYDPEKDV 187 (345)
Q Consensus 125 ~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~~~~~v~~yd~~~~~ 187 (345)
.++.++|..++.=... .........+++.. ++ .+++.|+.+ ..+.+||..+.+
T Consensus 166 ---~tv~~Wd~~~~~~~~~-~~~~~~~v~~v~~~p~~~~~l~~~~~d------~~v~~wd~~t~~ 220 (393)
T 4gq1_A 166 ---CTLIIWRLTDEGPILA-GYPLSSPGISVQFRPSNPNQLIVGERN------GNIRIFDWTLNL 220 (393)
T ss_dssp ---SEEEEEEEETTEEEEE-EEECSSCEEEEEEETTEEEEEEEEETT------SEEEEEETTCCC
T ss_pred ---CeEEEEECCCCceeee-ecCCCCCcEEEEECCCCCceEEecCCC------CEEEEEECCCCc
Confidence 4677888765431110 11111112233333 33 355555543 347888877654
No 326
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=35.64 E-value=2.6e+02 Score=25.51 Aligned_cols=112 Identities=12% Similarity=0.075 Sum_probs=62.7
Q ss_pred EEEEE---CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCCCc--eeeeeeE--------eC-Ce
Q 019186 96 GVVST---AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLVPR--AMFACCA--------LK-EK 161 (345)
Q Consensus 96 ~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r--~~~~~~~--------~~-~~ 161 (345)
.+++. ++.||+.-.. ...++++|+.++..+.+....... .-..+++ .+ +.
T Consensus 143 ~la~dp~~~~~Lyv~~~~----------------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 143 RLAFDPLNKDHLYICYDG----------------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp EEEEETTEEEEEEEEEET----------------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCE
T ss_pred EEEEccCCCCEEEEEECC----------------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCE
Confidence 45555 3679988642 246899999998877654433211 1223333 23 44
Q ss_pred EEEEcCcCCCCCCCceEEEEeCCC-CceE------eCCCCCccCCCceeEEEE--CCEEEEEecCcceEEEEECC
Q 019186 162 IVVAGGFTSCRKSISQAEMYDPEK-DVWV------PIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHM 227 (345)
Q Consensus 162 iyv~gG~~~~~~~~~~v~~yd~~~-~~W~------~~~~~~~~~~~~~~~~~~--~~~iyv~gG~~~~i~~yd~~ 227 (345)
||+.--..+.......+..++... ..|. .++.. ...++++.. ++.||+..-....+++||+.
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 887743321001234578887554 3453 33322 222334443 47899987556779999997
No 327
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=35.11 E-value=1e+02 Score=24.62 Aligned_cols=58 Identities=12% Similarity=0.165 Sum_probs=36.1
Q ss_pred cCeEEEEeCcEEEEecCCc--eEE----ec-cchhh-----cccceeEEEE-ECCeEEEEcceecCCCCcccccccCcee
Q 019186 247 HDSVYLMSHGLIIKQHRDV--RKV----VA-SASEF-----RRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVD 313 (345)
Q Consensus 247 ~~~l~~~~~~~i~~~d~~~--W~~----~~-~~p~~-----~~r~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~~~v~ 313 (345)
++++|.+.+...+.||... -.. +. .+|.. ....-.++.. .++++|+|-| +..|
T Consensus 127 ~gk~yfFkG~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--------------~~yw 192 (225)
T 3oyo_A 127 GKEVYLFKGNKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--------------QNYV 192 (225)
T ss_dssp TTEEEEEETTEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--------------TEEE
T ss_pred CCcEEEEeCCeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--------------CEEE
Confidence 7899999999999998544 211 11 22311 1223333332 3789999977 2567
Q ss_pred eeccC
Q 019186 314 VLTVG 318 (345)
Q Consensus 314 ~yd~~ 318 (345)
.||..
T Consensus 193 r~d~~ 197 (225)
T 3oyo_A 193 RIDFT 197 (225)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 88887
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=32.05 E-value=48 Score=28.64 Aligned_cols=91 Identities=9% Similarity=0.030 Sum_probs=47.1
Q ss_pred EEEEeCCCC--ceEeCCC---CCccCCCceeEEEECCEEEEEec-CcceEEEEECCCCCeeeccCCCC---CCceE----
Q 019186 178 AEMYDPEKD--VWVPIPD---LHRTHNSACTGVVIGGKVHVLHK-GLSTVQVLDHMGLGWTVEDYGWL---QGPMA---- 244 (345)
Q Consensus 178 v~~yd~~~~--~W~~~~~---~~~~~~~~~~~~~~~~~iyv~gG-~~~~i~~yd~~~~~W~~~~~~~~---~~~~~---- 244 (345)
++.+|.++. .|+.-.. .+...+... ...++.+|++.. ....++.||..++.|..--..+. ...+.
T Consensus 22 l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~--~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~ 99 (339)
T 2be1_A 22 LHAVDRRNGHIIWSIEPENFQPLIEIQEPS--RLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTN 99 (339)
T ss_dssp EEEEETTTTEEEEEECGGGSCCSEECCCSC--TTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC
T ss_pred EEEEECCCCcEEEEecCCccCCcEEecCCc--cccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCC
Confidence 777777665 4774322 111101110 013556776642 46788899988775542111101 11122
Q ss_pred --E-------EcCeEEEEeC-cEEEEecCCc----eEEec
Q 019186 245 --I-------VHDSVYLMSH-GLIIKQHRDV----RKVVA 270 (345)
Q Consensus 245 --~-------~~~~l~~~~~-~~i~~~d~~~----W~~~~ 270 (345)
+ .++.+|+-.. +.++.+|..+ |+.-.
T Consensus 100 pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 100 IVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp ----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1 4555665554 7888888876 77643
No 329
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=31.52 E-value=75 Score=26.37 Aligned_cols=18 Identities=11% Similarity=-0.003 Sum_probs=12.8
Q ss_pred eeeeeEeCCeEEEEcCcC
Q 019186 152 MFACCALKEKIVVAGGFT 169 (345)
Q Consensus 152 ~~~~~~~~~~iyv~gG~~ 169 (345)
.|++++-++++|..|-..
T Consensus 34 ~h~~~l~~G~v~~wG~n~ 51 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGANL 51 (282)
T ss_dssp SEEEEEETTEEEEEECCS
T ss_pred CeEEEEECCEEEEEeCCC
Confidence 355555599999998654
No 330
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=30.63 E-value=3.8e+02 Score=25.94 Aligned_cols=227 Identities=11% Similarity=0.079 Sum_probs=112.5
Q ss_pred CCEEeCCCCCccccccceeEEEEE---CCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCCCCCC-----
Q 019186 77 DLWITLPVLPSKIRHLAHFGVVST---AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRASMLV----- 148 (345)
Q Consensus 77 ~~W~~~~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~----- 148 (345)
.+|+.+.+... ..-.++++. .+.+|+.+- ...+++-+-...+|+.+.....
T Consensus 4 ~~W~~~~~~~~----g~i~~i~~~p~~~~~~~a~~~-----------------~ggv~rS~DgG~tW~~~~~~~~~~~~~ 62 (789)
T 1sqj_A 4 YEFKNVAIGGG----GYITGIVAHPKTKDLLYARTD-----------------IGGAYRWDAGTSKWIPLNDFIEAQDMN 62 (789)
T ss_dssp CEEEECCCCBC----SCEEEEEECSSSTTCEEEEES-----------------SSCEEEEETTTTEEEESCTTCCGGGGG
T ss_pred ccceEccCCCC----CcEEEEEECCCCCCEEEEEec-----------------CCCEEEecCCCCCeeECccCCCccccc
Confidence 46988876322 233345554 245666532 2358888877889998765321
Q ss_pred CceeeeeeEe---CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCC-Cc----cCC-CceeEEEE---CCEEEEEec
Q 019186 149 PRAMFACCAL---KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDL-HR----THN-SACTGVVI---GGKVHVLHK 216 (345)
Q Consensus 149 ~r~~~~~~~~---~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~-~~----~~~-~~~~~~~~---~~~iyv~gG 216 (345)
.+....+++. .+.+|+..|.... .....++.=+-.-.+|+.+... +. +.+ ....+++. .+.+|+..
T Consensus 63 ~~~i~~ia~dp~~~~~i~~~~g~~~~-~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~- 140 (789)
T 1sqj_A 63 IMGTESIALDPNNPDRLYLAQGRYVG-DEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT- 140 (789)
T ss_dssp GCSEEEEEEETTEEEEEEEEECSCTT-SSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-
T ss_pred CCceeEEEECCCCCCEEEEEeCccCC-CcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-
Confidence 1223333332 2578887653210 0012344434445689987431 11 101 12234443 34566643
Q ss_pred CcceEEEEECCCCCeeeccCCCC------CCceEEE----cCeEEEEeC---cEEEEecCCc-eEEeccchhhc------
Q 019186 217 GLSTVQVLDHMGLGWTVEDYGWL------QGPMAIV----HDSVYLMSH---GLIIKQHRDV-RKVVASASEFR------ 276 (345)
Q Consensus 217 ~~~~i~~yd~~~~~W~~~~~~~~------~~~~~~~----~~~l~~~~~---~~i~~~d~~~-W~~~~~~p~~~------ 276 (345)
....+++=+=.-.+|+.+...+. ......+ .+.+|+... .....-|... |+++..++...
T Consensus 141 ~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~ 220 (789)
T 1sqj_A 141 RTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTG 220 (789)
T ss_dssp SSSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEECTTCCCSCCHHHHH
T ss_pred ccCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcccCCCCcCcccccccc
Confidence 23445543333468998865331 1112222 246777663 3444555444 99987544211
Q ss_pred --c------cceeEEEEE--CCeEEEEcceecCCCCcccccccCceeeeccCCCCCceeEcCCCCC
Q 019186 277 --R------RIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTR 332 (345)
Q Consensus 277 --~------r~~~~~~~~--~~~l~i~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~v~~~~~ 332 (345)
+ ...+.++.. ++.||+..+..... .. .....++..+-... +|.++...|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p-~~---g~~g~l~~S~DgG~--tW~~~~~~~~ 280 (789)
T 1sqj_A 221 AFPDKKPASIAPQPMKVALTPNFLYVTYADYPGP-WG---VTFGEVWRQNRTSG--AWDDITPRVG 280 (789)
T ss_dssp TSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSS-SC---CCCCCEEEEETTTC--CEEECCCCTT
T ss_pred ccCcccccccccceeEEcCCCCeEEEEEecCCCC-CC---CCCceEEEEeCCCC--ceEECcCCCC
Confidence 0 000333322 78888874321100 00 02235677666666 9999987553
No 331
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=30.15 E-value=2.7e+02 Score=24.09 Aligned_cols=62 Identities=11% Similarity=-0.099 Sum_probs=39.1
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeC---------CCCCccCCCceeEEEE-CCEEEEEecCcceEEEEECCC
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPI---------PDLHRTHNSACTGVVI-GGKVHVLHKGLSTVQVLDHMG 228 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~---------~~~~~~~~~~~~~~~~-~~~iyv~gG~~~~i~~yd~~~ 228 (345)
++++|++-|. ..+.||..+++-..- +.+|.. --+++.. ++++|++-| ...++||..+
T Consensus 284 ~~~~yfFkG~--------~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~---iDaA~~~~~g~~YfFkg--~~ywr~d~~~ 350 (365)
T 3ba0_A 284 FYRTYFFVDN--------QYWRYDERRQMMDPGYPKLITKNFQGIGPK---IDAVFYSKNKYYYFFQG--SNQFEYDFLL 350 (365)
T ss_dssp TTEEEEEETT--------EEEEEETTTTEECSSCCCCHHHHSTTCCSS---CSEEEEETTTEEEEEET--TEEEEEETTT
T ss_pred CCEEEEEECC--------EEEEEeCCcceecCCCCcchhhcCCCCCCc---cceeeEecCCcEEEEeC--CEEEEEECCc
Confidence 5899999763 488999776542210 112211 2234444 889999975 6789999887
Q ss_pred CCeee
Q 019186 229 LGWTV 233 (345)
Q Consensus 229 ~~W~~ 233 (345)
.+-..
T Consensus 351 ~~v~~ 355 (365)
T 3ba0_A 351 QRITK 355 (365)
T ss_dssp TEEEE
T ss_pred cEEec
Confidence 76543
No 332
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=29.93 E-value=3.5e+02 Score=25.28 Aligned_cols=59 Identities=10% Similarity=-0.073 Sum_probs=32.0
Q ss_pred ceEEEEeCCCCc-eEeCCCCCcc--CCCce--eEEEECCEEEEEec----CcceEEEEECCCCCeeec
Q 019186 176 SQAEMYDPEKDV-WVPIPDLHRT--HNSAC--TGVVIGGKVHVLHK----GLSTVQVLDHMGLGWTVE 234 (345)
Q Consensus 176 ~~v~~yd~~~~~-W~~~~~~~~~--~~~~~--~~~~~~~~iyv~gG----~~~~i~~yd~~~~~W~~~ 234 (345)
..+.++|..+.+ -..+...... ..... ....-|+++++... ....++.+|+.+++...+
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 378889988776 3444322111 01111 11233777654432 346788899988776543
No 333
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=25.94 E-value=5.5e+02 Score=26.29 Aligned_cols=103 Identities=10% Similarity=0.022 Sum_probs=56.4
Q ss_pred cCceEEEeCCCCCcccCCCCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCC--CCCccCCCceeE
Q 019186 127 TNEVWSYDPVTRQWSPRASMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTG 204 (345)
Q Consensus 127 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~ 204 (345)
...+.+|+...++.+.+......-.-.+++.++|++.+.-| ..+.+||...++--.+. ..+. ......
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig--------~~l~vy~l~~~~~L~~~~~~~~~--i~~~~l 932 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN--------STVRLYEWTTEKELRTECNHYNN--IMALYL 932 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET--------TEEEEEEECTTSCEEEEEEECCC--SCEEEE
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC--------CEEEEEECCCCceEEEEeecccc--EEEEEE
Confidence 44577777765554444333333344566777887766544 24788887765422211 1111 111123
Q ss_pred EEECCEEEEEec-CcceEEEEECCCCCeeeccCCCC
Q 019186 205 VVIGGKVHVLHK-GLSTVQVLDHMGLGWTVEDYGWL 239 (345)
Q Consensus 205 ~~~~~~iyv~gG-~~~~i~~yd~~~~~W~~~~~~~~ 239 (345)
.+.++.|++-.- ..-.+..|+...++...+.....
T Consensus 933 ~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~ 968 (1158)
T 3ei3_A 933 KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFN 968 (1158)
T ss_dssp EEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCS
T ss_pred eccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecc
Confidence 356777655432 34456678888888888765544
No 334
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=25.85 E-value=3.2e+02 Score=23.59 Aligned_cols=135 Identities=15% Similarity=0.109 Sum_probs=71.8
Q ss_pred CceEEE--eCCCCCcccCCCC--C--CC-ceeeeeeEe----CCeEEEEcCcCCCCCCCceEEEEeC---CCCce--EeC
Q 019186 128 NEVWSY--DPVTRQWSPRASM--L--VP-RAMFACCAL----KEKIVVAGGFTSCRKSISQAEMYDP---EKDVW--VPI 191 (345)
Q Consensus 128 ~~~~~y--d~~t~~W~~~~~~--~--~~-r~~~~~~~~----~~~iyv~gG~~~~~~~~~~v~~yd~---~~~~W--~~~ 191 (345)
+++.+| |+.+++++.+... | .. +.-+++|.+ .+++|++-.... ..++.|+. ..... +.+
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-----G~~~q~~l~~~~~g~~~~~lV 173 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-----GEFEQYELKADKNGYISGKKV 173 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-----SEEEEEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-----CeEEEEEEEeCCCCcccceEE
Confidence 456555 8889999888654 4 22 555667764 355555532221 24666655 33322 333
Q ss_pred CCCCccCCCceeEEEE---CCEEEEEecCcceEEEEECC--C-CCeeeccC--CC-C---CCceEEE-c----CeEEEEe
Q 019186 192 PDLHRTHNSACTGVVI---GGKVHVLHKGLSTVQVLDHM--G-LGWTVEDY--GW-L---QGPMAIV-H----DSVYLMS 254 (345)
Q Consensus 192 ~~~~~~~~~~~~~~~~---~~~iyv~gG~~~~i~~yd~~--~-~~W~~~~~--~~-~---~~~~~~~-~----~~l~~~~ 254 (345)
..++.+ . ....++. .+.||+-- ....|++||.+ + .+-+.+.. .. . ...++.. . +.|++.+
T Consensus 174 R~f~lg-s-q~EgcvvDd~~g~Lyv~e-Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 174 RAFKMN-S-QTEGMAADDEYGRLYIAE-EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp EEEECS-S-CEEEEEEETTTTEEEEEE-TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred EEecCC-C-CcceEEEcCCCCeEEEec-ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 344333 2 2344555 36888876 34569999954 2 12233211 11 1 2334443 2 3566666
Q ss_pred C--cEEEEecCC-ceEEec
Q 019186 255 H--GLIIKQHRD-VRKVVA 270 (345)
Q Consensus 255 ~--~~i~~~d~~-~W~~~~ 270 (345)
. +....||.+ .++.+.
T Consensus 251 QG~~s~~Vydr~~~~~~vg 269 (355)
T 3amr_A 251 QGNSSYAIYDRQGKNKYVA 269 (355)
T ss_dssp GGGTEEEEEESSTTCCEEE
T ss_pred CCCCEEEEEECCCCCcEEE
Confidence 3 688888886 354443
No 335
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=25.66 E-value=54 Score=23.98 Aligned_cols=28 Identities=11% Similarity=0.289 Sum_probs=23.0
Q ss_pred cceEEEEECCCCCeeeccCCCCCCceEEEcCeEEEEeC
Q 019186 218 LSTVQVLDHMGLGWTVEDYGWLQGPMAIVHDSVYLMSH 255 (345)
Q Consensus 218 ~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~l~~~~~ 255 (345)
...++.||..+++|.... +.|.+|++..
T Consensus 37 ~v~vY~f~~~~~~W~K~~----------iEG~LFv~~R 64 (134)
T 2lyd_A 37 HVAFYTFNSSQNEWEKTD----------VEGAFFIYHR 64 (134)
T ss_dssp EEEEEEEETTTTEEEEEE----------EEEEEEEEEC
T ss_pred eEEEEEecCCcCceeEcC----------CcceEEEEEc
Confidence 567889999999999864 7788888875
No 336
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=24.01 E-value=6e+02 Score=26.03 Aligned_cols=133 Identities=13% Similarity=0.010 Sum_probs=71.0
Q ss_pred CCeEEEEeCCCCCEEeCCCCCccccccceeEEEEECCEEEEEcCCCCCCCCCCCCCCCCcCcCceEEEeCCCCCcccCC-
Q 019186 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRQWSPRA- 144 (345)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~- 144 (345)
...+.+|+...++.+.+...... -.-.+++.++|+|.+.-| +.+.+|+...++--+..
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~---g~v~al~~~~g~Lla~ig------------------~~l~vy~l~~~~~L~~~~ 921 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVK---GAVYSMVEFNGKLLASIN------------------STVRLYEWTTEKELRTEC 921 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEES---SCEEEEEEETTEEEEEET------------------TEEEEEEECTTSCEEEEE
T ss_pred ceEEEEEEEECCEEEEEEEEEcC---CcCEEEeeeCCEEEEEcC------------------CEEEEEECCCCceEEEEe
Confidence 45788888876666666544432 334567778888776644 25777877655421100
Q ss_pred -CCCCCceeeeeeEeCCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEECCEEEEEecCcceEE-
Q 019186 145 -SMLVPRAMFACCALKEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQ- 222 (345)
Q Consensus 145 -~~~~~r~~~~~~~~~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~iyv~gG~~~~i~- 222 (345)
..+. .....+...++.|++.--.. .-.+..|+...++-..++.-..+ +...++..+++.-++.+-...+++
T Consensus 922 ~~~~~-i~~~~l~~~~~~I~vgD~~~-----Sv~~~~y~~~~~~L~~~a~D~~~-~~vta~~~ld~~t~l~aD~~gNl~v 994 (1158)
T 3ei3_A 922 NHYNN-IMALYLKTKGDFILVGDLMR-----SVLLLAYKPMEGNFEEIARDFNP-NWMSAVEILDDDNFLGAENAFNLFV 994 (1158)
T ss_dssp EECCC-SCEEEEEEETTEEEEEESSB-----CEEEEEEETTTTEEEEEEECCSC-BCEEEEEEEETTEEEEEETTSEEEE
T ss_pred ecccc-EEEEEEeccCCEEEEEEhhh-----eEEEEEEEcCCCeEEEEEeeccc-ccEEEEEEEccCcEEEEcCCCcEEE
Confidence 0000 00112224466655442221 23456688888888888766666 555555555443333332344444
Q ss_pred -EEEC
Q 019186 223 -VLDH 226 (345)
Q Consensus 223 -~yd~ 226 (345)
.|++
T Consensus 995 l~~~~ 999 (1158)
T 3ei3_A 995 CQKDS 999 (1158)
T ss_dssp EEECT
T ss_pred EecCC
Confidence 4444
No 337
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=22.64 E-value=4.4e+02 Score=23.96 Aligned_cols=100 Identities=8% Similarity=0.042 Sum_probs=61.0
Q ss_pred CCeEEEEcCcCCCCCCCceEEEEeCCCCceEeCCCCCccCCCceeEEEE---------CC-EEEEEecC------cceEE
Q 019186 159 KEKIVVAGGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI---------GG-KVHVLHKG------LSTVQ 222 (345)
Q Consensus 159 ~~~iyv~gG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~---------~~-~iyv~gG~------~~~i~ 222 (345)
++.||+.-.. .+.+.+.|++++.-+.+.............+.+ ++ .||+..-. ...++
T Consensus 151 ~~~Lyv~~~~------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~ 224 (496)
T 3kya_A 151 KDHLYICYDG------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVY 224 (496)
T ss_dssp EEEEEEEEET------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEE
T ss_pred CCEEEEEECC------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEE
Confidence 4678888542 246899999998887765443221223334434 44 58888531 23477
Q ss_pred EEECCC-CCee------eccCCCCCCceEEE--cCeEEEEeC--cEEEEecCC
Q 019186 223 VLDHMG-LGWT------VEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRD 264 (345)
Q Consensus 223 ~yd~~~-~~W~------~~~~~~~~~~~~~~--~~~l~~~~~--~~i~~~d~~ 264 (345)
.++... +.|. .++....+..+++. ++.||+... ..+++||++
T Consensus 225 ~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 225 IIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 887544 3553 34333334455443 578998876 789999987
No 338
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=21.48 E-value=31 Score=25.00 Aligned_cols=28 Identities=14% Similarity=0.297 Sum_probs=16.5
Q ss_pred cceEEEEECCCCCeeeccCCCCCCceEEEcCeEEEEeC
Q 019186 218 LSTVQVLDHMGLGWTVEDYGWLQGPMAIVHDSVYLMSH 255 (345)
Q Consensus 218 ~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~l~~~~~ 255 (345)
...++.||..+++|.... +.|.+|++..
T Consensus 32 ~v~vY~f~~~~~~W~K~~----------iEGtLFv~~R 59 (127)
T 2qkl_A 32 HVAVYQFDVGSQKWLKTS----------IEGTFFLVKD 59 (127)
T ss_dssp EEEEECC------CCEEE----------EEEEEEEEEE
T ss_pred eEEEEEecCCCCceEEcC----------cEEEEEEEEc
Confidence 566888999999999864 7778887764
No 339
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=20.85 E-value=4.1e+02 Score=23.00 Aligned_cols=16 Identities=25% Similarity=0.322 Sum_probs=11.2
Q ss_pred eeEEEEE-CCEEEEEcC
Q 019186 94 HFGVVST-AGKLFVLGG 109 (345)
Q Consensus 94 ~~~~~~~-~~~lyv~GG 109 (345)
.|+++.. ++.||.+|-
T Consensus 183 ~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 183 EHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SEEEEEETTSCEEEEEC
T ss_pred CeEEEEeCCCCEEEeeC
Confidence 4555544 789999984
Done!