Query 019187
Match_columns 345
No_of_seqs 435 out of 3087
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 12:14:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019187.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019187hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 4.7E-68 1.6E-72 500.3 21.9 283 49-341 9-292 (294)
2 1xj5_A Spermidine synthase 1; 100.0 1.1E-58 3.7E-63 446.6 32.0 327 10-342 7-333 (334)
3 3adn_A Spermidine synthase; am 100.0 3.7E-57 1.3E-61 428.8 20.7 282 50-341 10-292 (294)
4 2i7c_A Spermidine synthase; tr 100.0 2.1E-55 7.2E-60 414.4 31.5 281 50-340 2-282 (283)
5 2o07_A Spermidine synthase; st 100.0 1E-55 3.5E-60 420.8 27.0 294 40-340 9-302 (304)
6 2b2c_A Spermidine synthase; be 100.0 6.6E-55 2.2E-59 416.9 26.1 285 47-338 2-313 (314)
7 1iy9_A Spermidine synthase; ro 100.0 1.7E-54 5.7E-59 406.8 27.1 274 51-339 2-275 (275)
8 1inl_A Spermidine synthase; be 100.0 6.1E-53 2.1E-57 400.1 29.0 281 49-340 14-295 (296)
9 2pt6_A Spermidine synthase; tr 100.0 8.3E-53 2.8E-57 403.6 29.8 281 49-340 39-320 (321)
10 3bwc_A Spermidine synthase; SA 100.0 2.1E-52 7.3E-57 397.7 26.5 287 46-339 12-302 (304)
11 1uir_A Polyamine aminopropyltr 100.0 1.1E-50 3.6E-55 387.7 27.0 283 50-342 3-290 (314)
12 1mjf_A Spermidine synthase; sp 100.0 6E-51 2.1E-55 383.5 24.7 272 51-340 2-280 (281)
13 2cmg_A Spermidine synthase; tr 100.0 1.2E-50 3.9E-55 378.3 21.3 260 52-342 1-260 (262)
14 3c6k_A Spermine synthase; sper 100.0 2E-48 6.8E-53 377.0 23.2 242 43-290 123-379 (381)
15 2qfm_A Spermine synthase; sper 100.0 2.5E-44 8.4E-49 347.1 24.7 243 40-290 103-362 (364)
16 3gjy_A Spermidine synthase; AP 100.0 3.9E-33 1.3E-37 265.8 20.2 232 80-327 30-282 (317)
17 3orh_A Guanidinoacetate N-meth 99.6 4.4E-15 1.5E-19 135.2 13.0 124 108-240 45-169 (236)
18 3tfw_A Putative O-methyltransf 99.6 1.9E-14 6.4E-19 131.9 16.9 149 126-289 63-225 (248)
19 3duw_A OMT, O-methyltransferas 99.6 2.5E-14 8.7E-19 127.9 15.0 150 126-289 58-222 (223)
20 3dr5_A Putative O-methyltransf 99.6 1.4E-14 5E-19 130.8 13.5 104 129-241 59-163 (221)
21 3c3y_A Pfomt, O-methyltransfer 99.6 1.1E-14 3.6E-19 132.7 12.0 150 125-289 69-236 (237)
22 3p9n_A Possible methyltransfer 99.6 2E-14 6.9E-19 125.6 13.3 110 125-242 43-154 (189)
23 3ntv_A MW1564 protein; rossman 99.6 4.3E-14 1.5E-18 128.0 14.8 104 126-240 71-175 (232)
24 1sui_A Caffeoyl-COA O-methyltr 99.6 1.8E-14 6.1E-19 132.3 12.3 107 125-241 78-190 (247)
25 3c3p_A Methyltransferase; NP_9 99.5 1.6E-14 5.6E-19 128.2 10.6 104 126-241 56-160 (210)
26 3dxy_A TRNA (guanine-N(7)-)-me 99.5 4.3E-14 1.5E-18 127.4 13.1 114 126-243 34-152 (218)
27 1yzh_A TRNA (guanine-N(7)-)-me 99.5 9.9E-14 3.4E-18 123.7 14.6 114 126-243 41-158 (214)
28 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.5E-13 5.1E-18 123.0 15.0 114 126-243 38-155 (213)
29 1dus_A MJ0882; hypothetical pr 99.5 5E-13 1.7E-17 115.5 17.3 125 125-263 51-175 (194)
30 3r3h_A O-methyltransferase, SA 99.5 1.9E-14 6.4E-19 131.8 8.0 106 126-241 60-170 (242)
31 2ozv_A Hypothetical protein AT 99.5 2E-13 6.7E-18 126.1 13.8 132 125-262 35-186 (260)
32 3tr6_A O-methyltransferase; ce 99.5 1.6E-13 5.6E-18 122.6 12.8 106 126-241 64-174 (225)
33 1zx0_A Guanidinoacetate N-meth 99.5 1.7E-13 5.8E-18 123.9 11.9 111 125-241 59-170 (236)
34 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.6E-13 5.5E-18 127.1 12.0 108 124-240 68-177 (261)
35 3ckk_A TRNA (guanine-N(7)-)-me 99.5 2.6E-13 8.8E-18 123.7 12.3 118 126-243 46-170 (235)
36 2ift_A Putative methylase HI07 99.5 1.3E-13 4.4E-18 122.3 9.3 110 126-243 53-165 (201)
37 3hm2_A Precorrin-6Y C5,15-meth 99.5 7.9E-13 2.7E-17 113.3 13.9 106 125-243 24-129 (178)
38 3cbg_A O-methyltransferase; cy 99.5 3.7E-13 1.3E-17 121.9 12.3 106 126-241 72-182 (232)
39 4hg2_A Methyltransferase type 99.5 9.7E-14 3.3E-18 128.4 8.4 99 125-242 38-136 (257)
40 3e05_A Precorrin-6Y C5,15-meth 99.5 7.1E-13 2.4E-17 116.9 13.6 104 125-241 39-142 (204)
41 3mti_A RRNA methylase; SAM-dep 99.4 1.5E-12 5.2E-17 112.8 15.1 110 125-241 21-135 (185)
42 3lpm_A Putative methyltransfer 99.4 1.1E-12 3.8E-17 120.5 14.8 126 126-260 49-190 (259)
43 3u81_A Catechol O-methyltransf 99.4 3.6E-13 1.2E-17 120.7 10.9 108 126-241 58-170 (221)
44 2avd_A Catechol-O-methyltransf 99.4 6.6E-13 2.3E-17 119.0 12.3 107 125-241 68-179 (229)
45 1xdz_A Methyltransferase GIDB; 99.4 2.5E-12 8.6E-17 116.7 16.2 148 126-289 70-219 (240)
46 3fpf_A Mtnas, putative unchara 99.4 4.1E-13 1.4E-17 126.4 10.6 104 123-242 119-223 (298)
47 4dzr_A Protein-(glutamine-N5) 99.4 2.7E-13 9.3E-18 119.2 8.8 152 125-289 29-205 (215)
48 2fpo_A Methylase YHHF; structu 99.4 4.7E-13 1.6E-17 118.7 10.3 106 126-242 54-161 (202)
49 2hnk_A SAM-dependent O-methylt 99.4 1E-12 3.4E-17 119.2 12.2 106 126-241 60-181 (239)
50 2igt_A SAM dependent methyltra 99.4 1.5E-12 5E-17 124.8 13.4 127 126-256 153-288 (332)
51 2frn_A Hypothetical protein PH 99.4 7.6E-13 2.6E-17 123.4 10.9 144 125-284 124-270 (278)
52 3njr_A Precorrin-6Y methylase; 99.4 3.5E-12 1.2E-16 113.4 14.6 117 125-261 54-170 (204)
53 2esr_A Methyltransferase; stru 99.4 4.2E-13 1.4E-17 115.5 8.2 109 125-243 30-140 (177)
54 3evz_A Methyltransferase; NYSG 99.4 1.1E-12 3.7E-17 117.6 10.9 127 125-261 54-196 (230)
55 2fhp_A Methylase, putative; al 99.4 2.7E-13 9.3E-18 117.1 6.4 109 126-243 44-156 (187)
56 3g89_A Ribosomal RNA small sub 99.4 5.5E-12 1.9E-16 115.9 15.4 149 125-289 79-229 (249)
57 3jwh_A HEN1; methyltransferase 99.4 4.1E-12 1.4E-16 113.0 13.9 111 126-242 29-142 (217)
58 2b78_A Hypothetical protein SM 99.4 1.4E-12 4.7E-17 127.3 11.5 128 126-256 212-346 (385)
59 3grz_A L11 mtase, ribosomal pr 99.4 1.8E-12 6E-17 114.4 11.1 100 125-240 59-158 (205)
60 2gpy_A O-methyltransferase; st 99.4 1.3E-12 4.4E-17 117.8 10.0 105 126-240 54-159 (233)
61 3eey_A Putative rRNA methylase 99.4 1.1E-11 3.8E-16 108.4 15.4 113 125-241 21-139 (197)
62 2vdv_E TRNA (guanine-N(7)-)-me 99.4 3.3E-12 1.1E-16 116.4 12.5 117 126-242 49-174 (246)
63 3jwg_A HEN1, methyltransferase 99.4 8.6E-12 3E-16 110.9 14.8 111 126-242 29-142 (219)
64 3dtn_A Putative methyltransfer 99.4 2.5E-12 8.6E-17 115.4 10.8 106 125-241 43-148 (234)
65 1jsx_A Glucose-inhibited divis 99.4 2.8E-12 9.6E-17 113.0 10.9 102 126-242 65-166 (207)
66 1g8a_A Fibrillarin-like PRE-rR 99.4 1.7E-11 5.7E-16 109.9 16.2 103 125-240 72-177 (227)
67 1ws6_A Methyltransferase; stru 99.4 8.7E-13 3E-17 112.1 7.3 104 126-242 41-148 (171)
68 1nt2_A Fibrillarin-like PRE-rR 99.4 1.2E-11 4.2E-16 110.5 14.8 104 125-241 56-161 (210)
69 3mb5_A SAM-dependent methyltra 99.3 3.1E-12 1E-16 116.6 10.7 118 125-261 92-210 (255)
70 2nxc_A L11 mtase, ribosomal pr 99.3 4.4E-12 1.5E-16 116.6 11.8 135 125-288 119-254 (254)
71 3dlc_A Putative S-adenosyl-L-m 99.3 3.5E-12 1.2E-16 112.4 10.5 105 126-240 43-147 (219)
72 4dcm_A Ribosomal RNA large sub 99.3 6.7E-12 2.3E-16 122.1 13.0 111 126-241 222-334 (375)
73 3dli_A Methyltransferase; PSI- 99.3 5E-12 1.7E-16 114.3 11.3 103 125-243 40-142 (240)
74 1pjz_A Thiopurine S-methyltran 99.3 1.1E-12 3.8E-17 116.4 6.7 108 125-237 21-136 (203)
75 2b3t_A Protein methyltransfera 99.3 8.7E-12 3E-16 115.6 13.0 139 92-241 78-238 (276)
76 2gb4_A Thiopurine S-methyltran 99.3 4.9E-12 1.7E-16 116.5 11.0 109 126-239 68-189 (252)
77 3a27_A TYW2, uncharacterized p 99.3 8.9E-12 3.1E-16 115.8 12.6 144 125-283 118-263 (272)
78 2bm8_A Cephalosporin hydroxyla 99.3 2.2E-12 7.5E-17 117.5 8.0 101 126-242 81-188 (236)
79 3ofk_A Nodulation protein S; N 99.3 4.4E-12 1.5E-16 112.4 9.7 105 125-241 50-154 (216)
80 1l3i_A Precorrin-6Y methyltran 99.3 1.5E-11 5E-16 106.0 12.7 120 125-262 32-152 (192)
81 4htf_A S-adenosylmethionine-de 99.3 6.4E-12 2.2E-16 116.5 11.1 108 125-242 67-174 (285)
82 3hem_A Cyclopropane-fatty-acyl 99.3 1E-11 3.4E-16 116.3 12.5 109 125-242 71-184 (302)
83 3kkz_A Uncharacterized protein 99.3 5.9E-12 2E-16 115.6 10.6 107 125-242 45-151 (267)
84 3lbf_A Protein-L-isoaspartate 99.3 6.6E-12 2.2E-16 110.9 10.4 100 125-242 76-175 (210)
85 3g5l_A Putative S-adenosylmeth 99.3 1E-11 3.5E-16 112.9 11.9 105 126-244 44-148 (253)
86 3f4k_A Putative methyltransfer 99.3 6.5E-12 2.2E-16 114.2 10.4 106 125-241 45-150 (257)
87 1vl5_A Unknown conserved prote 99.3 6.1E-12 2.1E-16 114.9 10.2 104 125-240 36-139 (260)
88 3mgg_A Methyltransferase; NYSG 99.3 3.8E-12 1.3E-16 117.2 8.9 107 125-241 36-142 (276)
89 2ex4_A Adrenal gland protein A 99.3 2.6E-12 8.8E-17 116.2 7.6 107 126-241 79-185 (241)
90 1ve3_A Hypothetical protein PH 99.3 5.3E-12 1.8E-16 112.3 9.5 105 126-241 38-142 (227)
91 2yxd_A Probable cobalt-precorr 99.3 5.5E-11 1.9E-15 101.7 15.5 114 125-261 34-147 (183)
92 4dmg_A Putative uncharacterize 99.3 1.4E-11 4.9E-16 120.5 13.1 124 126-257 214-342 (393)
93 3g07_A 7SK snRNA methylphospha 99.3 3.2E-12 1.1E-16 119.7 7.7 116 126-241 46-220 (292)
94 1fbn_A MJ fibrillarin homologu 99.3 1.1E-11 3.7E-16 111.8 10.7 103 125-240 73-177 (230)
95 3hnr_A Probable methyltransfer 99.3 1.2E-11 4.3E-16 109.6 10.7 113 111-241 33-145 (220)
96 3ujc_A Phosphoethanolamine N-m 99.3 7.6E-12 2.6E-16 113.8 9.6 106 125-241 54-159 (266)
97 3gu3_A Methyltransferase; alph 99.3 1.4E-11 4.7E-16 114.6 11.4 107 125-243 21-128 (284)
98 2xvm_A Tellurite resistance pr 99.3 9.1E-12 3.1E-16 108.4 9.6 104 126-240 32-135 (199)
99 3g5t_A Trans-aconitate 3-methy 99.3 9.4E-12 3.2E-16 116.3 10.3 109 125-240 35-148 (299)
100 3e23_A Uncharacterized protein 99.3 2.5E-11 8.5E-16 107.3 12.4 100 125-241 42-141 (211)
101 3k6r_A Putative transferase PH 99.3 3.3E-11 1.1E-15 112.6 13.7 102 125-241 124-225 (278)
102 1wxx_A TT1595, hypothetical pr 99.3 1.1E-11 3.8E-16 120.6 10.7 124 126-255 209-339 (382)
103 2p7i_A Hypothetical protein; p 99.3 1E-11 3.4E-16 111.5 9.5 100 126-242 42-142 (250)
104 2b25_A Hypothetical protein; s 99.3 9.3E-12 3.2E-16 118.7 9.8 123 125-260 104-234 (336)
105 3h2b_A SAM-dependent methyltra 99.3 1.3E-11 4.4E-16 108.4 9.7 100 127-241 42-141 (203)
106 3ou2_A SAM-dependent methyltra 99.3 1.3E-11 4.3E-16 109.0 9.5 103 125-242 45-147 (218)
107 3c0k_A UPF0064 protein YCCW; P 99.3 2.3E-11 7.9E-16 118.8 12.2 128 126-256 220-354 (396)
108 1yb2_A Hypothetical protein TA 99.3 1E-11 3.5E-16 115.1 9.2 104 125-243 109-213 (275)
109 2yvl_A TRMI protein, hypotheti 99.3 2.3E-11 7.9E-16 109.9 11.0 101 126-242 91-191 (248)
110 3dmg_A Probable ribosomal RNA 99.3 1.3E-11 4.6E-16 120.2 10.1 109 126-243 233-342 (381)
111 2as0_A Hypothetical protein PH 99.3 2.1E-11 7.1E-16 119.1 11.4 126 126-255 217-349 (396)
112 1xxl_A YCGJ protein; structura 99.3 1.3E-11 4.6E-16 111.6 9.3 105 125-241 20-124 (239)
113 3lcc_A Putative methyl chlorid 99.3 9.3E-12 3.2E-16 112.0 8.2 106 126-241 66-171 (235)
114 3dh0_A SAM dependent methyltra 99.3 5.3E-12 1.8E-16 112.0 6.5 107 125-241 36-143 (219)
115 2p35_A Trans-aconitate 2-methy 99.3 1.3E-11 4.4E-16 112.2 9.1 102 125-242 32-133 (259)
116 1nkv_A Hypothetical protein YJ 99.3 1.1E-11 3.8E-16 112.5 8.6 106 125-241 35-140 (256)
117 3m70_A Tellurite resistance pr 99.2 1.5E-11 5.2E-16 113.9 9.7 104 126-241 120-223 (286)
118 1nv8_A HEMK protein; class I a 99.2 4.3E-11 1.5E-15 112.0 12.8 140 91-241 90-249 (284)
119 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.9E-11 6.4E-16 111.2 10.0 118 125-260 95-213 (258)
120 3bkw_A MLL3908 protein, S-aden 99.2 2.9E-11 9.9E-16 108.6 10.8 104 126-243 43-146 (243)
121 3i9f_A Putative type 11 methyl 99.2 4.5E-11 1.5E-15 101.9 11.4 97 125-241 16-112 (170)
122 1o54_A SAM-dependent O-methylt 99.2 1.7E-11 5.9E-16 113.5 9.4 117 125-260 111-228 (277)
123 2yqz_A Hypothetical protein TT 99.2 2.4E-11 8.4E-16 110.4 10.2 103 125-240 38-140 (263)
124 1kpg_A CFA synthase;, cyclopro 99.2 3.6E-11 1.2E-15 111.3 11.5 106 125-241 63-168 (287)
125 3pfg_A N-methyltransferase; N, 99.2 1.4E-11 4.9E-16 112.7 8.5 100 125-240 49-150 (263)
126 3d2l_A SAM-dependent methyltra 99.2 1.6E-11 5.5E-16 110.3 8.7 105 126-243 33-139 (243)
127 2vdw_A Vaccinia virus capping 99.2 1.5E-11 5E-16 116.2 8.8 114 126-242 48-170 (302)
128 3l8d_A Methyltransferase; stru 99.2 3.1E-11 1.1E-15 108.5 10.5 102 125-241 52-153 (242)
129 4df3_A Fibrillarin-like rRNA/T 99.2 4.6E-11 1.6E-15 108.9 11.6 127 124-262 75-209 (233)
130 1wzn_A SAM-dependent methyltra 99.2 1.5E-11 5.2E-16 111.5 8.4 105 125-241 40-145 (252)
131 3v97_A Ribosomal RNA large sub 99.2 2.8E-11 9.5E-16 126.7 11.5 114 126-243 539-659 (703)
132 3ajd_A Putative methyltransfer 99.2 4.1E-11 1.4E-15 111.3 11.4 117 125-245 82-215 (274)
133 3cgg_A SAM-dependent methyltra 99.2 2.9E-11 9.8E-16 104.4 9.3 102 125-241 45-147 (195)
134 4fsd_A Arsenic methyltransfera 99.2 2E-11 6.7E-16 118.8 9.2 112 126-241 83-203 (383)
135 1xtp_A LMAJ004091AAA; SGPP, st 99.2 2.4E-11 8.4E-16 110.0 9.1 106 125-241 92-197 (254)
136 2pxx_A Uncharacterized protein 99.2 1.2E-11 3.9E-16 108.9 6.7 108 125-241 41-159 (215)
137 3e8s_A Putative SAM dependent 99.2 4.9E-11 1.7E-15 105.5 10.8 101 126-243 52-154 (227)
138 3bus_A REBM, methyltransferase 99.2 5.4E-11 1.8E-15 109.1 11.3 107 125-241 60-166 (273)
139 2ipx_A RRNA 2'-O-methyltransfe 99.2 2.6E-11 9E-16 109.2 9.0 104 125-241 76-182 (233)
140 3ccf_A Cyclopropane-fatty-acyl 99.2 3.9E-11 1.3E-15 110.9 10.4 100 125-242 56-155 (279)
141 3thr_A Glycine N-methyltransfe 99.2 1.5E-11 5.1E-16 114.2 7.4 115 126-242 57-176 (293)
142 2yx1_A Hypothetical protein MJ 99.2 5.7E-11 2E-15 113.7 11.7 132 125-281 194-325 (336)
143 3ggd_A SAM-dependent methyltra 99.2 3.2E-11 1.1E-15 109.0 9.4 106 125-241 55-163 (245)
144 3sm3_A SAM-dependent methyltra 99.2 5.6E-11 1.9E-15 105.9 10.7 112 125-241 29-141 (235)
145 2p8j_A S-adenosylmethionine-de 99.2 1.3E-11 4.6E-16 108.4 6.5 120 110-241 9-128 (209)
146 2fk8_A Methoxy mycolic acid sy 99.2 7.5E-11 2.6E-15 111.0 11.6 107 125-242 89-195 (318)
147 3ocj_A Putative exported prote 99.2 1.4E-11 4.9E-16 115.6 6.5 110 125-241 117-227 (305)
148 2pbf_A Protein-L-isoaspartate 99.2 2.8E-11 9.7E-16 108.2 8.2 105 125-241 79-193 (227)
149 2qm3_A Predicted methyltransfe 99.2 4.2E-11 1.4E-15 116.2 9.9 100 126-235 172-271 (373)
150 2yxe_A Protein-L-isoaspartate 99.2 5.2E-11 1.8E-15 105.5 9.5 102 125-242 76-178 (215)
151 1dl5_A Protein-L-isoaspartate 99.2 4.9E-11 1.7E-15 113.0 9.9 103 125-243 74-177 (317)
152 3kr9_A SAM-dependent methyltra 99.2 4E-11 1.4E-15 108.7 8.9 107 125-242 14-120 (225)
153 2pjd_A Ribosomal RNA small sub 99.2 2E-11 6.7E-16 117.1 7.2 108 126-242 196-304 (343)
154 3g2m_A PCZA361.24; SAM-depende 99.2 1.3E-11 4.5E-16 115.3 5.9 110 126-243 82-192 (299)
155 1i1n_A Protein-L-isoaspartate 99.2 5.3E-11 1.8E-15 106.4 9.6 118 112-242 64-183 (226)
156 3vc1_A Geranyl diphosphate 2-C 99.2 3.6E-11 1.2E-15 113.3 8.8 106 125-241 116-221 (312)
157 2kw5_A SLR1183 protein; struct 99.2 6E-11 2.1E-15 103.9 9.7 100 129-241 32-131 (202)
158 1y8c_A S-adenosylmethionine-de 99.2 3E-11 1E-15 108.4 7.9 106 126-243 37-144 (246)
159 3q7e_A Protein arginine N-meth 99.2 5E-11 1.7E-15 114.6 9.8 108 126-241 66-173 (349)
160 1i9g_A Hypothetical protein RV 99.2 5.1E-11 1.8E-15 109.9 9.5 120 125-260 98-218 (280)
161 3r0q_C Probable protein argini 99.2 7.1E-11 2.4E-15 114.8 10.9 109 125-242 62-170 (376)
162 3dou_A Ribosomal RNA large sub 99.2 1.5E-10 5E-15 102.0 11.9 150 113-289 14-181 (191)
163 3tma_A Methyltransferase; thum 99.2 7.5E-11 2.6E-15 113.3 10.9 112 125-242 202-318 (354)
164 1ixk_A Methyltransferase; open 99.2 1.3E-10 4.4E-15 110.3 12.1 114 125-244 117-249 (315)
165 1ri5_A MRNA capping enzyme; me 99.2 3.1E-11 1E-15 111.8 7.7 111 125-242 63-175 (298)
166 3gdh_A Trimethylguanosine synt 99.2 8.7E-12 3E-16 112.6 3.6 103 126-240 78-180 (241)
167 3p2e_A 16S rRNA methylase; met 99.2 2.1E-11 7.1E-16 110.3 6.1 109 126-239 24-137 (225)
168 3lec_A NADB-rossmann superfami 99.2 5.3E-11 1.8E-15 108.2 8.8 106 125-241 20-125 (230)
169 1r18_A Protein-L-isoaspartate( 99.2 4.8E-11 1.6E-15 107.1 8.4 105 126-242 84-195 (227)
170 3m33_A Uncharacterized protein 99.2 3.4E-11 1.2E-15 108.1 7.2 93 125-239 47-140 (226)
171 2qy6_A UPF0209 protein YFCK; s 99.2 7.9E-11 2.7E-15 108.9 9.8 148 126-289 60-247 (257)
172 2o57_A Putative sarcosine dime 99.2 4.7E-11 1.6E-15 111.1 8.4 107 125-241 81-187 (297)
173 1vbf_A 231AA long hypothetical 99.2 1.1E-10 3.7E-15 104.6 10.4 97 125-241 69-165 (231)
174 3gnl_A Uncharacterized protein 99.2 9.8E-11 3.3E-15 107.3 10.2 106 125-241 20-125 (244)
175 3uwp_A Histone-lysine N-methyl 99.2 8.1E-11 2.8E-15 115.2 9.9 111 125-240 172-287 (438)
176 1jg1_A PIMT;, protein-L-isoasp 99.2 7.6E-11 2.6E-15 106.4 9.1 102 125-243 90-191 (235)
177 2qe6_A Uncharacterized protein 99.2 3.3E-10 1.1E-14 105.4 13.6 108 126-241 77-196 (274)
178 1ne2_A Hypothetical protein TA 99.2 4.5E-10 1.5E-14 98.5 13.6 96 125-239 50-145 (200)
179 3bxo_A N,N-dimethyltransferase 99.2 5.8E-11 2E-15 106.3 8.0 101 125-241 39-141 (239)
180 2fyt_A Protein arginine N-meth 99.1 1.4E-10 4.9E-15 111.1 11.2 106 125-238 63-168 (340)
181 3fzg_A 16S rRNA methylase; met 99.1 4.4E-11 1.5E-15 105.5 6.9 115 110-241 38-152 (200)
182 1wy7_A Hypothetical protein PH 99.1 1.4E-09 4.9E-14 95.5 16.6 100 126-240 49-148 (207)
183 3q87_B N6 adenine specific DNA 99.1 2.1E-10 7.2E-15 98.7 10.8 96 126-241 23-123 (170)
184 1ej0_A FTSJ; methyltransferase 99.1 7.1E-11 2.4E-15 99.9 7.7 119 125-262 21-153 (180)
185 3id6_C Fibrillarin-like rRNA/T 99.1 1.7E-10 5.9E-15 105.0 10.7 106 124-241 74-181 (232)
186 1o9g_A RRNA methyltransferase; 99.1 4.9E-11 1.7E-15 108.7 7.1 114 126-240 51-213 (250)
187 3iv6_A Putative Zn-dependent a 99.1 1.5E-10 5.2E-15 107.2 10.4 109 125-246 44-153 (261)
188 3cc8_A Putative methyltransfer 99.1 1.6E-10 5.3E-15 102.5 9.4 101 125-242 31-131 (230)
189 2avn_A Ubiquinone/menaquinone 99.1 1E-10 3.6E-15 107.0 8.4 103 125-245 53-156 (260)
190 4hc4_A Protein arginine N-meth 99.1 1.1E-10 3.8E-15 113.5 8.9 121 110-241 69-189 (376)
191 2gs9_A Hypothetical protein TT 99.1 9.6E-11 3.3E-15 103.3 7.7 98 126-242 36-133 (211)
192 2plw_A Ribosomal RNA methyltra 99.1 2.9E-10 9.8E-15 99.5 10.2 119 125-262 21-171 (201)
193 2aot_A HMT, histamine N-methyl 99.1 1.5E-10 5.3E-15 107.9 8.8 111 126-241 52-172 (292)
194 2h00_A Methyltransferase 10 do 99.1 4.7E-11 1.6E-15 108.9 5.1 82 126-210 65-150 (254)
195 3bgv_A MRNA CAP guanine-N7 met 99.1 5.3E-11 1.8E-15 112.0 5.6 115 126-241 34-155 (313)
196 3dp7_A SAM-dependent methyltra 99.1 2.4E-10 8.2E-15 110.2 10.4 110 125-241 178-287 (363)
197 2y1w_A Histone-arginine methyl 99.1 1.6E-10 5.6E-15 110.9 9.1 106 126-241 50-155 (348)
198 3m6w_A RRNA methylase; rRNA me 99.1 3.7E-10 1.3E-14 112.6 11.8 115 125-245 100-233 (464)
199 1u2z_A Histone-lysine N-methyl 99.1 2.4E-10 8.3E-15 113.0 10.3 108 125-240 241-358 (433)
200 3axs_A Probable N(2),N(2)-dime 99.1 1.7E-10 5.8E-15 112.7 8.9 104 126-241 52-158 (392)
201 2dul_A N(2),N(2)-dimethylguano 99.1 3.1E-10 1.1E-14 110.5 10.5 105 126-241 47-164 (378)
202 3mq2_A 16S rRNA methyltransfer 99.1 1.8E-10 6.3E-15 102.2 7.8 110 125-241 26-140 (218)
203 1g6q_1 HnRNP arginine N-methyl 99.1 3.1E-10 1.1E-14 108.1 9.9 106 126-239 38-143 (328)
204 3ege_A Putative methyltransfer 99.1 1.8E-10 6.1E-15 105.6 7.9 98 125-241 33-130 (261)
205 3hp7_A Hemolysin, putative; st 99.1 3.9E-10 1.3E-14 106.0 9.7 128 94-240 54-184 (291)
206 3m4x_A NOL1/NOP2/SUN family pr 99.1 6.3E-10 2.2E-14 110.7 11.8 116 125-245 104-238 (456)
207 2yxl_A PH0851 protein, 450AA l 99.0 5.4E-10 1.9E-14 111.0 10.7 117 125-245 258-393 (450)
208 2i62_A Nicotinamide N-methyltr 99.0 5.1E-11 1.7E-15 108.4 2.7 115 126-241 56-198 (265)
209 2frx_A Hypothetical protein YE 99.0 7.9E-10 2.7E-14 110.8 11.5 127 126-257 117-264 (479)
210 3bkx_A SAM-dependent methyltra 99.0 5.4E-10 1.8E-14 102.5 9.4 110 125-241 42-159 (275)
211 1p91_A Ribosomal RNA large sub 99.0 3.5E-10 1.2E-14 103.7 8.1 96 125-242 84-179 (269)
212 2a14_A Indolethylamine N-methy 99.0 3.5E-11 1.2E-15 110.8 1.1 113 126-241 55-197 (263)
213 2nyu_A Putative ribosomal RNA 99.0 4.8E-10 1.6E-14 97.5 8.2 119 125-262 21-162 (196)
214 3bt7_A TRNA (uracil-5-)-methyl 99.0 3E-09 1E-13 103.0 14.2 102 127-244 214-329 (369)
215 3mcz_A O-methyltransferase; ad 99.0 4E-10 1.4E-14 107.6 8.0 108 127-241 180-287 (352)
216 1sqg_A SUN protein, FMU protei 99.0 9E-10 3.1E-14 108.7 10.7 116 125-245 245-378 (429)
217 3i53_A O-methyltransferase; CO 99.0 6.7E-10 2.3E-14 105.4 9.5 106 126-241 169-274 (332)
218 3gwz_A MMCR; methyltransferase 99.0 1.1E-09 3.7E-14 105.9 10.8 107 125-241 201-307 (369)
219 1uwv_A 23S rRNA (uracil-5-)-me 99.0 5.5E-09 1.9E-13 103.2 15.2 102 126-241 286-389 (433)
220 2jjq_A Uncharacterized RNA met 99.0 2.2E-09 7.6E-14 106.0 11.9 99 125-241 289-387 (425)
221 2g72_A Phenylethanolamine N-me 99.0 1.4E-10 4.8E-15 107.8 2.8 114 126-240 71-214 (289)
222 3bzb_A Uncharacterized protein 99.0 1.4E-09 4.9E-14 101.2 9.7 109 126-240 79-204 (281)
223 2ih2_A Modification methylase 99.0 4.5E-10 1.5E-14 109.7 6.3 120 126-261 39-184 (421)
224 1qzz_A RDMB, aclacinomycin-10- 99.0 8.4E-10 2.9E-14 106.1 8.0 107 125-241 181-287 (374)
225 2ip2_A Probable phenazine-spec 99.0 1.4E-09 4.9E-14 103.0 9.5 104 128-241 169-272 (334)
226 3cvo_A Methyltransferase-like 99.0 3.1E-09 1.1E-13 94.6 11.1 101 126-240 30-153 (202)
227 3sso_A Methyltransferase; macr 99.0 7.8E-10 2.7E-14 107.9 7.7 109 111-241 205-324 (419)
228 1x19_A CRTF-related protein; m 99.0 2.5E-09 8.6E-14 102.6 11.1 107 125-241 189-295 (359)
229 2r3s_A Uncharacterized protein 99.0 7E-10 2.4E-14 104.9 7.1 108 125-241 164-271 (335)
230 3b3j_A Histone-arginine methyl 99.0 6.8E-10 2.3E-14 111.3 7.1 106 126-241 158-263 (480)
231 2f8l_A Hypothetical protein LM 99.0 1E-09 3.4E-14 105.1 7.9 128 126-261 130-276 (344)
232 2wa2_A Non-structural protein 98.9 6.1E-10 2.1E-14 103.9 5.9 126 125-263 81-213 (276)
233 1vlm_A SAM-dependent methyltra 98.9 9.8E-10 3.3E-14 97.8 6.9 92 127-241 48-139 (219)
234 3htx_A HEN1; HEN1, small RNA m 98.9 4.3E-09 1.5E-13 110.4 12.6 111 126-241 721-834 (950)
235 1tw3_A COMT, carminomycin 4-O- 98.9 1.2E-09 4.1E-14 104.6 7.7 107 125-241 182-288 (360)
236 2oxt_A Nucleoside-2'-O-methylt 98.9 6.2E-10 2.1E-14 103.2 5.4 126 125-263 73-205 (265)
237 3tm4_A TRNA (guanine N2-)-meth 98.9 8.3E-09 2.8E-13 100.0 13.4 146 125-289 216-366 (373)
238 3opn_A Putative hemolysin; str 98.9 3.1E-09 1.1E-13 96.5 8.9 114 108-240 21-136 (232)
239 4a6d_A Hydroxyindole O-methylt 98.9 5.2E-09 1.8E-13 100.6 10.5 105 126-241 179-283 (353)
240 2p41_A Type II methyltransfera 98.9 3.9E-09 1.3E-13 99.8 8.9 123 126-263 82-211 (305)
241 4e2x_A TCAB9; kijanose, tetron 98.9 2.7E-09 9.1E-14 104.4 8.0 103 125-241 106-208 (416)
242 3giw_A Protein of unknown func 98.9 1.4E-08 5E-13 94.4 12.0 111 126-241 78-200 (277)
243 3lcv_B Sisomicin-gentamicin re 98.9 1.3E-09 4.6E-14 100.4 4.6 106 125-241 131-236 (281)
244 3lst_A CALO1 methyltransferase 98.8 7.7E-09 2.6E-13 98.9 9.4 104 125-241 183-286 (348)
245 4azs_A Methyltransferase WBDD; 98.8 8.8E-09 3E-13 105.2 9.6 77 125-207 65-141 (569)
246 3reo_A (ISO)eugenol O-methyltr 98.8 6.7E-09 2.3E-13 100.3 8.3 99 125-241 202-300 (368)
247 1zq9_A Probable dimethyladenos 98.8 1.2E-08 4E-13 95.4 9.3 76 126-210 28-103 (285)
248 1af7_A Chemotaxis receptor met 98.8 8.4E-09 2.9E-13 96.1 7.9 111 126-240 105-251 (274)
249 3p9c_A Caffeic acid O-methyltr 98.8 1E-08 3.4E-13 99.0 8.5 99 125-241 200-298 (364)
250 1fp1_D Isoliquiritigenin 2'-O- 98.8 6.3E-09 2.1E-13 100.4 6.6 98 125-240 208-305 (372)
251 2xyq_A Putative 2'-O-methyl tr 98.8 2.3E-08 7.8E-13 93.9 10.1 127 110-262 45-189 (290)
252 2zfu_A Nucleomethylin, cerebra 98.8 1.5E-08 5.2E-13 89.4 8.4 126 125-290 66-192 (215)
253 1fp2_A Isoflavone O-methyltran 98.8 1E-08 3.5E-13 98.1 7.8 98 126-241 188-288 (352)
254 3vyw_A MNMC2; tRNA wobble urid 98.8 1.2E-07 4.1E-12 89.4 14.6 144 127-290 97-261 (308)
255 2b9e_A NOL1/NOP2/SUN domain fa 98.7 4.6E-08 1.6E-12 92.6 11.4 116 125-245 101-238 (309)
256 3frh_A 16S rRNA methylase; met 98.7 1.5E-08 5.2E-13 92.4 7.1 102 125-240 104-205 (253)
257 3gru_A Dimethyladenosine trans 98.7 3.2E-08 1.1E-12 93.1 9.5 74 126-209 50-123 (295)
258 3ll7_A Putative methyltransfer 98.7 1.4E-08 4.8E-13 99.6 6.8 81 127-211 94-174 (410)
259 3ldu_A Putative methylase; str 98.7 2E-08 6.9E-13 97.9 7.8 111 126-242 195-345 (385)
260 3ldg_A Putative uncharacterize 98.7 4.4E-08 1.5E-12 95.4 10.2 110 126-241 194-343 (384)
261 1m6y_A S-adenosyl-methyltransf 98.7 6.4E-08 2.2E-12 91.3 10.9 90 112-209 15-107 (301)
262 2h1r_A Dimethyladenosine trans 98.7 1.7E-08 5.9E-13 94.9 6.9 76 125-210 41-116 (299)
263 3k0b_A Predicted N6-adenine-sp 98.7 2.6E-08 9.1E-13 97.3 8.3 110 126-241 201-350 (393)
264 3fut_A Dimethyladenosine trans 98.7 8.4E-08 2.9E-12 89.1 11.2 97 129-241 49-145 (271)
265 2okc_A Type I restriction enzy 98.7 2.6E-08 8.9E-13 98.7 7.6 111 126-241 171-307 (445)
266 3tqs_A Ribosomal RNA small sub 98.6 9.5E-08 3.3E-12 88.0 9.5 75 126-209 29-105 (255)
267 1qam_A ERMC' methyltransferase 98.6 1.7E-07 5.7E-12 85.5 10.4 74 126-209 30-103 (244)
268 2r6z_A UPF0341 protein in RSP 98.6 2.1E-08 7E-13 92.6 4.3 81 126-211 83-172 (258)
269 1zg3_A Isoflavanone 4'-O-methy 98.6 5.3E-08 1.8E-12 93.3 7.1 97 126-240 193-292 (358)
270 2oyr_A UPF0341 protein YHIQ; a 98.6 3.8E-08 1.3E-12 90.9 5.8 82 128-212 90-176 (258)
271 2wk1_A NOVP; transferase, O-me 98.6 6.8E-08 2.3E-12 90.3 7.3 109 125-241 105-244 (282)
272 3ftd_A Dimethyladenosine trans 98.5 5.1E-07 1.8E-11 82.7 10.9 98 126-241 31-131 (249)
273 2ld4_A Anamorsin; methyltransf 98.5 9.5E-08 3.3E-12 81.8 5.7 89 125-240 11-100 (176)
274 1yub_A Ermam, rRNA methyltrans 98.5 6.4E-09 2.2E-13 94.7 -2.2 87 111-210 17-103 (245)
275 2ar0_A M.ecoki, type I restric 98.5 2.7E-07 9.3E-12 93.7 8.6 115 126-243 169-314 (541)
276 4fzv_A Putative methyltransfer 98.5 2.7E-06 9.3E-11 82.0 14.9 135 125-260 147-305 (359)
277 2oo3_A Protein involved in cat 98.5 7.3E-07 2.5E-11 82.9 10.4 131 111-261 82-216 (283)
278 3khk_A Type I restriction-modi 98.4 2E-07 6.7E-12 94.8 7.0 133 125-261 243-417 (544)
279 3lkd_A Type I restriction-modi 98.4 1.3E-06 4.3E-11 88.8 12.8 134 126-261 221-379 (542)
280 3s1s_A Restriction endonucleas 98.4 1.8E-06 6.1E-11 90.6 13.8 136 126-262 321-488 (878)
281 3v97_A Ribosomal RNA large sub 98.4 6E-07 2E-11 93.9 8.6 114 126-242 190-348 (703)
282 3evf_A RNA-directed RNA polyme 98.3 7.4E-07 2.5E-11 82.4 7.1 151 125-290 73-228 (277)
283 4gqb_A Protein arginine N-meth 98.3 1E-06 3.5E-11 90.7 6.8 106 127-241 358-467 (637)
284 3gcz_A Polyprotein; flavivirus 98.2 1E-06 3.4E-11 81.7 5.8 163 110-290 77-245 (282)
285 1qyr_A KSGA, high level kasuga 98.2 1.6E-06 5.6E-11 79.5 6.3 77 126-210 21-100 (252)
286 3uzu_A Ribosomal RNA small sub 98.2 2.9E-06 9.9E-11 79.0 8.0 76 126-209 42-123 (279)
287 3ua3_A Protein arginine N-meth 98.2 4E-06 1.4E-10 86.7 9.1 110 127-242 410-535 (745)
288 3eld_A Methyltransferase; flav 98.1 1.3E-05 4.3E-10 74.8 10.1 162 111-290 69-235 (300)
289 3ps9_A TRNA 5-methylaminomethy 98.1 2E-05 6.8E-10 81.7 12.0 115 127-242 67-220 (676)
290 1wg8_A Predicted S-adenosylmet 98.1 1.9E-05 6.4E-10 73.4 10.4 84 113-209 12-98 (285)
291 3pvc_A TRNA 5-methylaminomethy 97.9 3E-05 1E-09 80.7 10.6 116 126-242 58-212 (689)
292 2px2_A Genome polyprotein [con 97.7 0.00017 5.7E-09 66.0 10.0 138 110-264 60-204 (269)
293 3ufb_A Type I restriction-modi 97.6 0.00027 9.1E-09 71.5 11.8 133 126-262 217-384 (530)
294 3p8z_A Mtase, non-structural p 97.6 0.00043 1.5E-08 62.6 11.5 140 110-264 65-207 (267)
295 4auk_A Ribosomal RNA large sub 97.6 0.00023 7.8E-09 68.6 9.5 71 125-210 210-280 (375)
296 3r24_A NSP16, 2'-O-methyl tran 97.5 0.00043 1.5E-08 64.4 10.0 149 109-288 90-256 (344)
297 3lkz_A Non-structural protein 97.4 0.00058 2E-08 63.5 9.5 144 107-264 78-225 (321)
298 2efj_A 3,7-dimethylxanthine me 97.4 0.00065 2.2E-08 65.9 9.6 109 127-241 53-225 (384)
299 1i4w_A Mitochondrial replicati 97.3 0.00023 7.9E-09 68.3 5.8 59 127-192 59-117 (353)
300 3b5i_A S-adenosyl-L-methionine 97.3 0.00051 1.8E-08 66.4 8.1 117 125-241 51-225 (374)
301 3tos_A CALS11; methyltransfera 97.2 0.0019 6.4E-08 59.3 10.4 141 125-278 68-249 (257)
302 3tka_A Ribosomal RNA small sub 97.1 0.0014 4.7E-08 62.3 9.1 75 126-208 57-136 (347)
303 1g55_A DNA cytosine methyltran 97.1 0.0046 1.6E-07 58.9 12.4 151 127-290 2-170 (343)
304 1m6e_X S-adenosyl-L-methionnin 97.0 0.00093 3.2E-08 64.2 6.5 115 124-241 49-209 (359)
305 2zig_A TTHA0409, putative modi 96.9 0.0011 3.6E-08 61.8 6.3 46 125-172 234-279 (297)
306 2k4m_A TR8_protein, UPF0146 pr 96.9 0.00032 1.1E-08 58.9 2.2 79 126-233 35-115 (153)
307 1f8f_A Benzyl alcohol dehydrog 96.8 0.0019 6.7E-08 61.6 6.9 100 125-241 189-289 (371)
308 2c7p_A Modification methylase 96.7 0.049 1.7E-06 51.4 15.9 147 127-289 11-173 (327)
309 3s2e_A Zinc-containing alcohol 96.6 0.0046 1.6E-07 58.2 8.1 98 125-241 165-263 (340)
310 1pl8_A Human sorbitol dehydrog 96.6 0.0055 1.9E-07 58.2 8.5 97 125-241 170-273 (356)
311 3g7u_A Cytosine-specific methy 96.5 0.011 3.7E-07 57.0 10.3 149 128-290 3-173 (376)
312 4ej6_A Putative zinc-binding d 96.5 0.0041 1.4E-07 59.5 7.2 100 125-241 181-284 (370)
313 3m6i_A L-arabinitol 4-dehydrog 96.5 0.012 4E-07 55.9 10.3 99 125-241 178-283 (363)
314 3fpc_A NADP-dependent alcohol 96.5 0.0034 1.2E-07 59.4 6.3 100 125-241 165-266 (352)
315 1boo_A Protein (N-4 cytosine-s 96.3 0.0044 1.5E-07 58.5 5.7 67 178-244 11-87 (323)
316 3uko_A Alcohol dehydrogenase c 96.2 0.0065 2.2E-07 58.1 6.6 100 125-241 192-295 (378)
317 1eg2_A Modification methylase 96.2 0.0072 2.5E-07 57.0 6.5 65 179-243 36-108 (319)
318 2dph_A Formaldehyde dismutase; 96.2 0.0072 2.5E-07 58.3 6.7 109 125-241 184-299 (398)
319 3fwz_A Inner membrane protein 96.1 0.035 1.2E-06 45.2 9.6 98 127-243 7-107 (140)
320 4eez_A Alcohol dehydrogenase 1 96.0 0.023 7.7E-07 53.4 9.3 100 125-241 162-263 (348)
321 3jv7_A ADH-A; dehydrogenase, n 96.0 0.015 5.1E-07 54.7 7.9 97 125-241 170-270 (345)
322 1g60_A Adenine-specific methyl 96.0 0.0062 2.1E-07 55.4 5.0 61 181-241 4-74 (260)
323 1pqw_A Polyketide synthase; ro 96.0 0.012 4.3E-07 50.5 6.7 98 125-241 37-137 (198)
324 2b5w_A Glucose dehydrogenase; 96.0 0.017 5.9E-07 54.7 8.2 94 128-241 174-273 (357)
325 2zig_A TTHA0409, putative modi 96.0 0.0072 2.5E-07 56.1 5.3 66 178-243 18-99 (297)
326 1cdo_A Alcohol dehydrogenase; 95.9 0.014 4.6E-07 55.7 7.2 97 125-241 191-294 (374)
327 1p0f_A NADP-dependent alcohol 95.9 0.014 4.8E-07 55.6 7.2 97 125-241 190-293 (373)
328 2jhf_A Alcohol dehydrogenase E 95.9 0.017 5.7E-07 55.1 7.7 97 125-241 190-293 (374)
329 4b7c_A Probable oxidoreductase 95.9 0.018 6E-07 54.0 7.6 99 125-241 148-248 (336)
330 1e3i_A Alcohol dehydrogenase, 95.8 0.015 5.2E-07 55.4 7.2 97 125-241 194-297 (376)
331 4dvj_A Putative zinc-dependent 95.8 0.017 5.9E-07 55.0 7.2 97 126-240 171-269 (363)
332 1pjc_A Protein (L-alanine dehy 95.8 0.058 2E-06 51.4 10.9 100 126-240 166-266 (361)
333 2fzw_A Alcohol dehydrogenase c 95.8 0.016 5.6E-07 55.1 7.1 97 125-241 189-292 (373)
334 1e3j_A NADP(H)-dependent ketos 95.7 0.027 9.4E-07 53.1 8.5 96 125-241 167-271 (352)
335 3ubt_Y Modification methylase 95.7 0.21 7.2E-06 46.4 14.5 147 129-290 2-164 (331)
336 1vj0_A Alcohol dehydrogenase, 95.7 0.017 5.7E-07 55.3 7.0 97 125-241 194-298 (380)
337 1g60_A Adenine-specific methyl 95.7 0.011 3.9E-07 53.6 5.5 46 125-172 211-256 (260)
338 4a2c_A Galactitol-1-phosphate 95.6 0.03 1E-06 52.4 8.3 100 125-241 159-260 (346)
339 1uuf_A YAHK, zinc-type alcohol 95.6 0.034 1.2E-06 53.1 8.5 95 125-241 193-288 (369)
340 1v3u_A Leukotriene B4 12- hydr 95.5 0.024 8.2E-07 53.0 7.2 98 125-241 144-244 (333)
341 3ip1_A Alcohol dehydrogenase, 95.5 0.033 1.1E-06 53.7 8.3 101 125-241 212-318 (404)
342 1kol_A Formaldehyde dehydrogen 95.4 0.035 1.2E-06 53.3 8.1 109 125-241 184-300 (398)
343 2d8a_A PH0655, probable L-thre 95.4 0.017 5.8E-07 54.4 5.6 99 126-241 167-267 (348)
344 3uog_A Alcohol dehydrogenase; 95.3 0.042 1.4E-06 52.2 8.2 95 125-241 188-287 (363)
345 3qv2_A 5-cytosine DNA methyltr 95.3 0.3 1E-05 46.0 14.1 153 126-290 9-181 (327)
346 2j3h_A NADP-dependent oxidored 95.3 0.026 9E-07 52.9 6.4 99 125-241 154-255 (345)
347 2dq4_A L-threonine 3-dehydroge 95.2 0.0093 3.2E-07 56.2 3.2 98 126-241 164-262 (343)
348 2zb4_A Prostaglandin reductase 95.2 0.027 9.3E-07 53.2 6.3 97 128-241 162-260 (357)
349 4h0n_A DNMT2; SAH binding, tra 95.2 0.27 9.2E-06 46.4 13.1 155 128-295 4-175 (333)
350 2c0c_A Zinc binding alcohol de 95.2 0.036 1.2E-06 52.7 7.1 98 125-241 162-261 (362)
351 3two_A Mannitol dehydrogenase; 95.1 0.056 1.9E-06 50.8 8.3 90 125-241 175-265 (348)
352 2vhw_A Alanine dehydrogenase; 95.1 0.13 4.3E-06 49.4 10.8 97 126-240 167-267 (377)
353 2h6e_A ADH-4, D-arabinose 1-de 95.1 0.038 1.3E-06 52.0 6.9 95 126-241 170-269 (344)
354 3me5_A Cytosine-specific methy 95.0 0.21 7.2E-06 49.7 12.5 125 127-260 88-249 (482)
355 4eye_A Probable oxidoreductase 95.0 0.056 1.9E-06 50.8 8.0 96 125-240 158-256 (342)
356 3l9w_A Glutathione-regulated p 95.0 0.08 2.7E-06 51.6 9.3 97 127-242 4-103 (413)
357 1rjw_A ADH-HT, alcohol dehydro 95.0 0.029 1E-06 52.7 5.9 98 125-241 163-261 (339)
358 3fbg_A Putative arginate lyase 95.0 0.034 1.1E-06 52.4 6.3 97 126-241 150-248 (346)
359 2hcy_A Alcohol dehydrogenase 1 94.9 0.031 1.1E-06 52.6 5.9 99 125-241 168-269 (347)
360 3qwb_A Probable quinone oxidor 94.8 0.033 1.1E-06 52.1 5.7 98 125-241 147-247 (334)
361 3gms_A Putative NADPH:quinone 94.8 0.025 8.5E-07 53.1 4.8 98 125-241 143-243 (340)
362 3jyn_A Quinone oxidoreductase; 94.6 0.034 1.1E-06 51.9 5.2 98 125-241 139-239 (325)
363 2cf5_A Atccad5, CAD, cinnamyl 94.5 0.063 2.2E-06 50.8 7.0 95 126-241 180-275 (357)
364 4dup_A Quinone oxidoreductase; 94.4 0.039 1.3E-06 52.2 5.2 98 125-241 166-265 (353)
365 2eez_A Alanine dehydrogenase; 94.3 0.24 8.1E-06 47.3 10.6 100 126-240 165-265 (369)
366 1jvb_A NAD(H)-dependent alcoho 94.3 0.039 1.3E-06 52.0 5.0 99 125-241 169-271 (347)
367 1yqd_A Sinapyl alcohol dehydro 94.3 0.11 3.8E-06 49.2 8.2 95 126-241 187-282 (366)
368 1piw_A Hypothetical zinc-type 94.2 0.049 1.7E-06 51.6 5.4 97 125-241 178-276 (360)
369 3dfz_A SIRC, precorrin-2 dehyd 94.1 0.21 7.1E-06 44.6 9.0 100 114-241 18-121 (223)
370 2cdc_A Glucose dehydrogenase g 94.1 0.096 3.3E-06 49.6 7.2 93 127-241 181-278 (366)
371 2eih_A Alcohol dehydrogenase; 94.0 0.072 2.4E-06 50.0 6.2 98 125-241 165-265 (343)
372 1wly_A CAAR, 2-haloacrylate re 93.9 0.078 2.7E-06 49.5 6.1 98 125-241 144-244 (333)
373 3goh_A Alcohol dehydrogenase, 93.9 0.1 3.5E-06 48.3 6.8 88 125-241 141-229 (315)
374 2g1u_A Hypothetical protein TM 93.9 0.14 4.8E-06 42.2 7.0 101 126-244 18-121 (155)
375 3iht_A S-adenosyl-L-methionine 93.9 0.066 2.2E-06 45.1 4.8 114 115-239 29-145 (174)
376 1iz0_A Quinone oxidoreductase; 93.9 0.14 4.9E-06 46.9 7.8 91 125-240 124-217 (302)
377 4dio_A NAD(P) transhydrogenase 93.8 0.32 1.1E-05 47.2 10.5 110 126-241 189-312 (405)
378 3gaz_A Alcohol dehydrogenase s 93.8 0.12 4.2E-06 48.4 7.3 95 125-241 149-246 (343)
379 3nx4_A Putative oxidoreductase 93.8 0.1 3.4E-06 48.4 6.6 91 129-241 149-241 (324)
380 3llv_A Exopolyphosphatase-rela 93.6 0.59 2E-05 37.4 10.3 69 128-209 7-79 (141)
381 2qrv_A DNA (cytosine-5)-methyl 93.6 0.18 6E-06 46.9 7.9 75 126-210 15-93 (295)
382 3gg2_A Sugar dehydrogenase, UD 93.6 1.3 4.4E-05 43.4 14.5 108 128-243 3-124 (450)
383 3p2y_A Alanine dehydrogenase/p 93.6 0.23 7.7E-06 47.9 8.8 108 126-240 183-301 (381)
384 1id1_A Putative potassium chan 93.5 0.44 1.5E-05 38.9 9.5 101 127-244 3-108 (153)
385 2y0c_A BCEC, UDP-glucose dehyd 93.5 0.98 3.4E-05 44.6 13.6 122 126-255 7-142 (478)
386 1qor_A Quinone oxidoreductase; 93.5 0.078 2.7E-06 49.3 5.3 98 125-241 139-239 (327)
387 1yb5_A Quinone oxidoreductase; 93.5 0.1 3.5E-06 49.2 6.2 98 125-241 169-269 (351)
388 3gqv_A Enoyl reductase; medium 93.4 0.18 6.1E-06 47.9 7.8 97 125-240 163-262 (371)
389 3ggo_A Prephenate dehydrogenas 93.3 0.61 2.1E-05 43.4 11.2 92 127-240 33-127 (314)
390 2j8z_A Quinone oxidoreductase; 93.3 0.1 3.5E-06 49.2 5.8 98 125-241 161-261 (354)
391 2o3j_A UDP-glucose 6-dehydroge 93.0 1.1 3.9E-05 44.1 13.2 122 128-255 10-149 (481)
392 1x13_A NAD(P) transhydrogenase 92.9 0.54 1.8E-05 45.4 10.4 42 126-168 171-213 (401)
393 2vz8_A Fatty acid synthase; tr 92.8 0.02 6.8E-07 67.6 -0.0 103 127-241 1241-1348(2512)
394 3swr_A DNA (cytosine-5)-methyl 92.8 4.8 0.00017 43.4 18.4 152 127-290 540-723 (1002)
395 3c85_A Putative glutathione-re 92.6 0.42 1.4E-05 40.2 8.2 99 127-243 39-141 (183)
396 1xa0_A Putative NADPH dependen 92.5 0.13 4.5E-06 47.7 5.3 93 129-241 152-246 (328)
397 1l7d_A Nicotinamide nucleotide 92.3 0.51 1.7E-05 45.2 9.3 42 126-168 171-213 (384)
398 3l4b_C TRKA K+ channel protien 92.2 0.77 2.6E-05 39.8 9.7 96 129-244 2-102 (218)
399 3ado_A Lambda-crystallin; L-gu 92.0 0.38 1.3E-05 45.2 7.8 107 125-244 4-126 (319)
400 4a7p_A UDP-glucose dehydrogena 91.7 1.2 4E-05 43.8 11.3 139 126-276 7-160 (446)
401 4a27_A Synaptic vesicle membra 91.7 0.19 6.7E-06 47.1 5.4 96 125-241 141-238 (349)
402 1lss_A TRK system potassium up 91.5 1.3 4.5E-05 34.7 9.5 93 128-239 5-101 (140)
403 1jw9_B Molybdopterin biosynthe 91.4 0.29 9.9E-06 44.1 6.1 34 127-160 31-65 (249)
404 1zcj_A Peroxisomal bifunctiona 91.3 1 3.5E-05 44.3 10.4 103 127-243 37-152 (463)
405 2vn8_A Reticulon-4-interacting 91.2 0.5 1.7E-05 44.8 7.8 97 125-241 182-280 (375)
406 3krt_A Crotonyl COA reductase; 91.1 0.44 1.5E-05 46.5 7.6 105 125-241 227-344 (456)
407 3oig_A Enoyl-[acyl-carrier-pro 91.0 2.7 9.4E-05 37.1 12.3 110 126-241 6-147 (266)
408 4a0s_A Octenoyl-COA reductase/ 90.9 0.39 1.3E-05 46.7 6.9 98 125-241 219-336 (447)
409 3ic5_A Putative saccharopine d 90.8 2.2 7.4E-05 32.3 10.0 67 127-208 5-77 (118)
410 2aef_A Calcium-gated potassium 90.8 1.5 5.1E-05 38.3 10.1 96 127-244 9-108 (234)
411 1boo_A Protein (N-4 cytosine-s 90.6 0.35 1.2E-05 45.3 5.9 62 125-193 251-312 (323)
412 1tt7_A YHFP; alcohol dehydroge 90.5 0.32 1.1E-05 45.1 5.7 91 129-241 153-247 (330)
413 2q3e_A UDP-glucose 6-dehydroge 90.4 4 0.00014 39.9 13.8 109 128-242 6-132 (467)
414 2py6_A Methyltransferase FKBM; 90.2 0.43 1.5E-05 46.2 6.5 48 125-172 225-274 (409)
415 3h8v_A Ubiquitin-like modifier 90.1 0.28 9.5E-06 45.5 4.8 34 127-160 36-70 (292)
416 3cea_A MYO-inositol 2-dehydrog 90.1 2.8 9.7E-05 38.7 11.9 72 126-210 7-81 (346)
417 4e12_A Diketoreductase; oxidor 90.0 1 3.5E-05 40.9 8.5 104 127-243 4-123 (283)
418 3ce6_A Adenosylhomocysteinase; 89.8 0.78 2.7E-05 45.7 8.0 88 126-241 273-361 (494)
419 3tqh_A Quinone oxidoreductase; 89.7 0.87 3E-05 42.0 7.9 92 125-241 151-245 (321)
420 4g65_A TRK system potassium up 89.6 2.5 8.4E-05 41.5 11.4 73 126-209 234-309 (461)
421 1f0y_A HCDH, L-3-hydroxyacyl-C 89.5 1.1 3.7E-05 41.0 8.4 103 127-242 15-137 (302)
422 3k96_A Glycerol-3-phosphate de 89.3 2 6.7E-05 40.7 10.2 129 127-277 29-165 (356)
423 3guy_A Short-chain dehydrogena 89.3 3.3 0.00011 35.7 11.1 72 128-209 2-81 (230)
424 1pzg_A LDH, lactate dehydrogen 89.3 3.2 0.00011 38.8 11.5 109 126-241 8-132 (331)
425 4g65_A TRK system potassium up 89.2 1.1 3.8E-05 44.0 8.6 69 127-207 3-75 (461)
426 3o38_A Short chain dehydrogena 89.2 2.9 0.0001 37.0 10.8 78 126-209 21-110 (266)
427 2g5c_A Prephenate dehydrogenas 89.1 1.9 6.6E-05 38.7 9.6 91 128-239 2-94 (281)
428 1zej_A HBD-9, 3-hydroxyacyl-CO 89.1 1.5 5E-05 40.6 8.8 98 125-243 10-109 (293)
429 3pid_A UDP-glucose 6-dehydroge 88.7 2.1 7.3E-05 41.7 10.2 109 127-244 36-156 (432)
430 3zwc_A Peroxisomal bifunctiona 88.7 1.7 5.8E-05 45.4 10.0 104 127-244 316-432 (742)
431 1lnq_A MTHK channels, potassiu 88.7 2.3 7.9E-05 39.4 10.1 95 127-243 115-213 (336)
432 1h2b_A Alcohol dehydrogenase; 88.5 0.54 1.8E-05 44.3 5.6 94 125-241 185-285 (359)
433 3mog_A Probable 3-hydroxybutyr 88.4 0.9 3.1E-05 45.0 7.3 104 127-244 5-123 (483)
434 3lyl_A 3-oxoacyl-(acyl-carrier 88.4 5.5 0.00019 34.6 11.9 78 126-209 4-91 (247)
435 3oj0_A Glutr, glutamyl-tRNA re 88.3 1.4 4.7E-05 35.5 7.3 84 127-239 21-108 (144)
436 4dll_A 2-hydroxy-3-oxopropiona 88.3 2.4 8.1E-05 39.2 9.8 91 126-241 30-124 (320)
437 1dlj_A UDP-glucose dehydrogena 88.2 2.4 8.1E-05 40.7 10.1 107 129-245 2-121 (402)
438 3h2s_A Putative NADH-flavin re 88.2 2.7 9.3E-05 35.8 9.6 100 129-241 2-104 (224)
439 3eod_A Protein HNR; response r 88.1 4.2 0.00014 31.0 9.8 79 150-239 7-85 (130)
440 3grk_A Enoyl-(acyl-carrier-pro 88.1 6.7 0.00023 35.5 12.6 108 126-241 30-169 (293)
441 1mv8_A GMD, GDP-mannose 6-dehy 87.8 5 0.00017 38.8 12.2 107 129-243 2-125 (436)
442 3pqe_A L-LDH, L-lactate dehydr 87.7 10 0.00035 35.3 13.9 105 126-241 4-122 (326)
443 2dpo_A L-gulonate 3-dehydrogen 87.7 1.5 5.2E-05 40.9 8.1 104 127-243 6-125 (319)
444 3imf_A Short chain dehydrogena 87.6 4.3 0.00015 35.9 10.8 77 127-209 6-92 (257)
445 3d0o_A L-LDH 1, L-lactate dehy 87.4 5.7 0.0002 36.8 11.9 107 126-241 5-123 (317)
446 1zud_1 Adenylyltransferase THI 87.4 0.98 3.4E-05 40.6 6.4 34 127-160 28-62 (251)
447 3d4o_A Dipicolinate synthase s 87.4 4.7 0.00016 36.7 11.1 89 126-241 154-244 (293)
448 4e7p_A Response regulator; DNA 87.2 3.6 0.00012 32.5 9.2 79 151-239 21-99 (150)
449 3b1f_A Putative prephenate deh 87.2 2.1 7.1E-05 38.6 8.6 89 128-238 7-98 (290)
450 4e21_A 6-phosphogluconate dehy 87.0 5.5 0.00019 37.7 11.7 94 127-243 22-117 (358)
451 3rui_A Ubiquitin-like modifier 87.0 0.78 2.7E-05 43.4 5.6 34 127-160 34-68 (340)
452 3h7a_A Short chain dehydrogena 86.9 4.4 0.00015 35.8 10.4 78 126-209 6-92 (252)
453 1eg2_A Modification methylase 86.8 0.67 2.3E-05 43.3 5.1 47 125-173 241-290 (319)
454 3sju_A Keto reductase; short-c 86.7 5.9 0.0002 35.5 11.3 78 126-209 23-110 (279)
455 1t2d_A LDH-P, L-lactate dehydr 86.7 3.2 0.00011 38.6 9.7 107 127-241 4-126 (322)
456 3av4_A DNA (cytosine-5)-methyl 86.6 15 0.00053 40.7 16.3 150 127-289 851-1033(1330)
457 1wma_A Carbonyl reductase [NAD 86.6 5.2 0.00018 35.0 10.7 110 126-241 3-138 (276)
458 2hmt_A YUAA protein; RCK, KTN, 86.4 2.6 8.9E-05 33.0 7.8 96 127-243 6-106 (144)
459 3o26_A Salutaridine reductase; 86.3 1.6 5.6E-05 39.2 7.3 79 126-209 11-100 (311)
460 2rir_A Dipicolinate synthase, 86.3 4.3 0.00015 37.1 10.3 89 126-241 156-246 (300)
461 3pk0_A Short-chain dehydrogena 86.3 5 0.00017 35.6 10.5 79 126-209 9-97 (262)
462 3tjr_A Short chain dehydrogena 86.3 5.5 0.00019 36.2 11.0 79 126-210 30-118 (301)
463 3ijr_A Oxidoreductase, short c 86.2 7.1 0.00024 35.2 11.7 110 126-241 46-182 (291)
464 4ft4_B DNA (cytosine-5)-methyl 86.2 21 0.0007 37.1 16.6 45 128-172 213-262 (784)
465 4hkt_A Inositol 2-dehydrogenas 86.2 5.4 0.00019 36.7 11.0 67 128-210 4-73 (331)
466 3kht_A Response regulator; PSI 85.8 3.8 0.00013 32.0 8.5 69 151-229 6-75 (144)
467 3pxx_A Carveol dehydrogenase; 85.7 11 0.00039 33.3 12.7 110 126-241 9-153 (287)
468 3f1l_A Uncharacterized oxidore 85.6 6.1 0.00021 34.7 10.7 79 126-209 11-101 (252)
469 1zsy_A Mitochondrial 2-enoyl t 85.5 2.9 9.8E-05 39.1 8.8 95 125-240 166-269 (357)
470 1y8q_A Ubiquitin-like 1 activa 85.5 0.71 2.4E-05 43.7 4.5 57 104-160 11-70 (346)
471 4gsl_A Ubiquitin-like modifier 85.5 0.7 2.4E-05 47.1 4.7 34 127-160 326-360 (615)
472 1ldn_A L-lactate dehydrogenase 85.4 16 0.00056 33.5 13.9 107 126-241 5-123 (316)
473 3rc1_A Sugar 3-ketoreductase; 85.3 7.5 0.00026 36.2 11.6 70 126-210 26-99 (350)
474 3slk_A Polyketide synthase ext 85.2 0.77 2.6E-05 48.3 5.0 96 125-241 344-442 (795)
475 4fn4_A Short chain dehydrogena 85.1 7.4 0.00025 34.9 11.0 78 126-209 6-93 (254)
476 3ucx_A Short chain dehydrogena 85.1 9.8 0.00034 33.6 11.9 76 126-209 10-97 (264)
477 3g0o_A 3-hydroxyisobutyrate de 85.1 1.6 5.5E-05 39.9 6.7 91 126-240 6-101 (303)
478 3i1j_A Oxidoreductase, short c 85.0 6.2 0.00021 34.2 10.3 79 126-209 13-103 (247)
479 4fs3_A Enoyl-[acyl-carrier-pro 85.0 5.8 0.0002 35.2 10.2 78 126-209 5-95 (256)
480 3qsg_A NAD-binding phosphogluc 85.0 7.5 0.00026 35.6 11.3 108 127-262 24-135 (312)
481 3dqp_A Oxidoreductase YLBE; al 85.0 4 0.00014 34.8 8.9 67 129-210 2-73 (219)
482 3ezy_A Dehydrogenase; structur 84.9 4.9 0.00017 37.2 10.1 69 128-210 3-74 (344)
483 3rih_A Short chain dehydrogena 84.9 3.7 0.00013 37.4 9.0 79 126-209 40-128 (293)
484 1smk_A Malate dehydrogenase, g 84.9 13 0.00045 34.4 13.0 105 126-241 7-125 (326)
485 3rkr_A Short chain oxidoreduct 84.8 5.9 0.0002 35.0 10.2 79 126-210 28-116 (262)
486 1rjd_A PPM1P, carboxy methyl t 84.8 3.4 0.00012 38.8 8.8 45 126-172 97-142 (334)
487 3pi7_A NADH oxidoreductase; gr 84.6 0.64 2.2E-05 43.5 3.7 95 128-241 166-263 (349)
488 3h5n_A MCCB protein; ubiquitin 84.5 2.5 8.5E-05 40.0 7.9 34 127-160 118-152 (353)
489 2zyd_A 6-phosphogluconate dehy 84.5 8.2 0.00028 37.9 11.9 96 126-239 14-111 (480)
490 1a5z_A L-lactate dehydrogenase 84.5 11 0.00036 34.8 12.1 103 129-240 2-115 (319)
491 1zh8_A Oxidoreductase; TM0312, 84.4 7.5 0.00026 36.0 11.2 73 126-211 17-93 (340)
492 3vku_A L-LDH, L-lactate dehydr 84.3 18 0.00062 33.7 13.6 108 125-241 7-125 (326)
493 3is3_A 17BETA-hydroxysteroid d 84.3 13 0.00043 33.0 12.2 110 126-241 17-152 (270)
494 3ged_A Short-chain dehydrogena 84.3 10 0.00036 33.8 11.6 72 128-209 3-84 (247)
495 4e6p_A Probable sorbitol dehyd 84.3 13 0.00043 32.7 12.2 76 126-210 7-92 (259)
496 3r1i_A Short-chain type dehydr 84.2 5.3 0.00018 35.8 9.7 79 126-210 31-119 (276)
497 3lf2_A Short chain oxidoreduct 84.2 8.6 0.0003 34.0 11.1 80 126-209 7-96 (265)
498 3kto_A Response regulator rece 84.2 4.4 0.00015 31.3 8.2 79 151-239 7-86 (136)
499 3q2i_A Dehydrogenase; rossmann 84.2 5.9 0.0002 36.9 10.3 71 126-210 12-85 (354)
500 3t8y_A CHEB, chemotaxis respon 84.1 2.6 9E-05 34.1 7.0 94 136-239 10-104 (164)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=4.7e-68 Score=500.34 Aligned_cols=283 Identities=35% Similarity=0.667 Sum_probs=251.8
Q ss_pred ccCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCc
Q 019187 49 VIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPK 128 (345)
Q Consensus 49 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~ 128 (345)
.+..||+|.. ++.++.++++++|++++|+||+|.|+++..+|++|+|||.+|++++||+.|||||+|+|++.+++|+
T Consensus 9 ~~~~w~e~~~---~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk 85 (294)
T 3o4f_A 9 EKKQWHETLH---DQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAK 85 (294)
T ss_dssp -CEEEECCSS---SSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCC
T ss_pred cccceeeecc---CCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCC
Confidence 4568998876 7889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccccc-CCCCCCEEEEEechHhHHhhCCCCCccEEEEc
Q 019187 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVD 207 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D 207 (345)
+||+||+|+|++++++++|+++++|++||||++|+++|+++|+.... .+++||++++++||++|++.. .++||+||+|
T Consensus 86 ~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-~~~yDvIi~D 164 (294)
T 3o4f_A 86 HVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISD 164 (294)
T ss_dssp EEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-SCCEEEEEES
T ss_pred eEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-cccCCEEEEe
Confidence 99999999999999999999999999999999999999999987643 478999999999999999876 7899999999
Q ss_pred CCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEEEEe
Q 019187 208 SSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCS 287 (345)
Q Consensus 208 ~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~~as 287 (345)
+++|.+++..||+.+||+.|+++|+|||++++|+++++++.+.+..++++++++| +.+.++++.||+||+|.|+|++||
T Consensus 165 ~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F-~~v~~~~~~vPty~~g~w~f~~as 243 (294)
T 3o4f_A 165 CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYF-SDVGFYQAAIPTYYGGIMTFAWAT 243 (294)
T ss_dssp CCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHC-SEEEEEEECCTTSSSSCEEEEEEE
T ss_pred CCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhC-CceeeeeeeeccCCCcceeheeEE
Confidence 9999999999999999999999999999999999999999999999999999999 678899999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhhhh
Q 019187 288 TEGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIESK 341 (345)
Q Consensus 288 k~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~~~ 341 (345)
|+.++.... .+....+.. ....+|||||+++|+|||+||+|+|++|+.+
T Consensus 244 ~~~~~~~~~---~~~~~~~~~--~~~~~~~yyn~~~h~aaF~lP~~~~~~l~~e 292 (294)
T 3o4f_A 244 DNDALRHLS---TEIIQARFL--ASGLKCRYYNPAIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp SCTTGGGCC---HHHHHHHHH--SSCCCCSSCCHHHHHHHTCCCHHHHHHTTSS
T ss_pred CCCccccCC---hHHHhHHHH--hhCCCceEECHHHHHHHccCcHHHHHHHhcC
Confidence 985432211 111111111 2345799999999999999999999999764
No 2
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=1.1e-58 Score=446.56 Aligned_cols=327 Identities=80% Similarity=1.344 Sum_probs=261.2
Q ss_pred CCCCCCCCCCccccccccCCCCccccccCCCCCCCCcccccCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEE
Q 019187 10 TDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQS 89 (345)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~ 89 (345)
.++|+|++++++.++.+.+ .+. ....+++..+++++++++||+|..++|||.+++++++++|++++|+||+|.|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~w~~e~~~~~~~~~~~~~v~~vl~~~~s~~q~I~v~~~ 83 (334)
T 1xj5_A 7 SATDLKRPREEDDNGGAAT--MET-ENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQS 83 (334)
T ss_dssp -------------------------------------CCCCSSEEEECCTTSTTEEEEEEEEEEEEEEECSSCEEEEEEE
T ss_pred ccccccccccccccccccc--hhc-ccCCCCCCCCCCcccccceEEEeccCCCCceEEEEeeeEEEEeecCCeEEEEEEc
Confidence 5789999999776643221 111 1134567788999999999999987899999999999999999999999999999
Q ss_pred cCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhc
Q 019187 90 STYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQF 169 (345)
Q Consensus 90 ~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~ 169 (345)
..+|++|++||.+|+++++++.|+||++|++++.++++++|||||||+|.++++++++++..+|++||+|+.+++.|+++
T Consensus 84 ~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~ 163 (334)
T 1xj5_A 84 ATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQF 163 (334)
T ss_dssp SSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999888889999999999999999999997778999999999999999999
Q ss_pred ccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhh
Q 019187 170 FPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMH 249 (345)
Q Consensus 170 ~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~ 249 (345)
++....++.+++++++++|+.+++...++++||+|++|+++|.++...+++.+|++.++++|+|||+|+++++++|....
T Consensus 164 ~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 243 (334)
T 1xj5_A 164 FPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMD 243 (334)
T ss_dssp CHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHH
T ss_pred HHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHH
Confidence 87542344568999999999999876545789999999998887777788899999999999999999999999999888
Q ss_pred HHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEEEEecCCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhc
Q 019187 250 IIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFC 329 (345)
Q Consensus 250 ~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~ 329 (345)
.+..+++.++++|+..+.++++.+|+|++|.|||++||++.++..+.+|+++++.++. ....+|||||+++|+|+|+
T Consensus 244 ~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~as~~~~~~~~~~~~~~~~~~~~---~~~~~~~yy~~~~h~~~f~ 320 (334)
T 1xj5_A 244 IIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDESSS---KSNGPLKFYNAEIHSAAFC 320 (334)
T ss_dssp HHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEECSSSCCCSSSCSSCCCSGGG---TTTCCCSSCCHHHHHHTTC
T ss_pred HHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEcccCCccccccCchhhhhhhhh---cccCCceEECHHHHHHHhc
Confidence 8888999999999656778889999999999999999998666677788766654433 1345799999999999999
Q ss_pred CcHHHHHHhhhhc
Q 019187 330 LPTFAKKVIESKN 342 (345)
Q Consensus 330 lp~~~~~~~~~~~ 342 (345)
||+|++++|+++.
T Consensus 321 lp~~~~~~l~~~~ 333 (334)
T 1xj5_A 321 LPSFAKKVIESKA 333 (334)
T ss_dssp CCHHHHHHHC---
T ss_pred CcHHHHHHHhccc
Confidence 9999999997653
No 3
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=3.7e-57 Score=428.83 Aligned_cols=282 Identities=36% Similarity=0.677 Sum_probs=232.1
Q ss_pred cCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCce
Q 019187 50 IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKK 129 (345)
Q Consensus 50 ~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~ 129 (345)
+..|+++ +|||.+++++++++|++++|+||+|.|+++..+|++|++||.+|++++|++.|+|||+|++++.++++++
T Consensus 10 ~~~~~~~---~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~ 86 (294)
T 3adn_A 10 KKQWHET---LHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKH 86 (294)
T ss_dssp --CEECC---SCSSEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCE
T ss_pred hhccccc---cCCCceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCE
Confidence 3479875 5899999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred EEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccccc-CCCCCCEEEEEechHhHHhhCCCCCccEEEEcC
Q 019187 130 VLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (345)
Q Consensus 130 VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~ 208 (345)
|||||||+|+++++++++++..+|++||||+.+++.|+++++..+. .++++|++++++|+.++++.. .++||+||+|+
T Consensus 87 VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fDvIi~D~ 165 (294)
T 3adn_A 87 VLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDC 165 (294)
T ss_dssp EEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-CCCEEEEEECC
T ss_pred EEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-CCCccEEEECC
Confidence 9999999999999999998788999999999999999999986532 367889999999999998764 68899999999
Q ss_pred CCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEEEEec
Q 019187 209 SDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCST 288 (345)
Q Consensus 209 ~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~~ask 288 (345)
++|.++...+++.+||+.++++|+|||++++|+++++...+.+..+.++++++| +.+.+++..+|+||+|.|||++||+
T Consensus 166 ~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~p~g~~~f~~as~ 244 (294)
T 3adn_A 166 TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYF-SDVGFYQAAIPTYYGGIMTFAWATD 244 (294)
T ss_dssp ----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHC-SEEEEEEEECTTSSSSEEEEEEEES
T ss_pred CCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHC-CCeEEEEEEecccCCCceEEEEEeC
Confidence 999988888999999999999999999999999999998899999999999999 5688888999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhhhh
Q 019187 289 EGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIESK 341 (345)
Q Consensus 289 ~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~~~ 341 (345)
..++..+ |.+.+..+.. ....+|||||+++|+|+|+||+|++++|+..
T Consensus 245 ~~~~~~~--~~~~~~~~~~---~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~~ 292 (294)
T 3adn_A 245 NDALRHL--STEIIQARFL---ASGLKCRYYNPAIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp CTTCSCC--HHHHCCCCCC-------CCSSCCHHHHHHTTCCCHHHHHHCCCC
T ss_pred CcccccC--CHHHHHHHHh---ccCCCCeEECHHHHHHHhcCcHHHHHHhhcc
Confidence 8544321 1222222211 1234799999999999999999999999653
No 4
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=2.1e-55 Score=414.40 Aligned_cols=281 Identities=51% Similarity=0.945 Sum_probs=252.7
Q ss_pred cCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCce
Q 019187 50 IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKK 129 (345)
Q Consensus 50 ~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~ 129 (345)
+++||+|..+.|||.+++++++++|++++|+||+|.|+++..+|++|++||.+|+++++++.|++|++|++++.++++++
T Consensus 2 ~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~ 81 (283)
T 2i7c_A 2 SKKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKN 81 (283)
T ss_dssp -CCEEEECCTTSTTCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCE
T ss_pred CceeEEEcccCCCCceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHHHHHHHhcCCCCCe
Confidence 35899998666899999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred EEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCC
Q 019187 130 VLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSS 209 (345)
Q Consensus 130 VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~ 209 (345)
|||||||+|.++++++++++..+|++||+|+.+++.|+++++..+.++++++++++++|+.+++... .++||+|++|++
T Consensus 82 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~ 160 (283)
T 2i7c_A 82 VLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDVIIVDSS 160 (283)
T ss_dssp EEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEEEEEECC
T ss_pred EEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-CCCceEEEEcCC
Confidence 9999999999999999997778999999999999999999986543455789999999999998765 688999999999
Q ss_pred CCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEEEEecC
Q 019187 210 DPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTE 289 (345)
Q Consensus 210 ~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~~ask~ 289 (345)
++.++...+++.+|++.++++|+|||+++++.++++...+.+..+.++++++| +.+.+++..+|+|++|+|||++|||+
T Consensus 161 ~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vP~y~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 161 DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLF-KKVEYANISIPTYPCGCIGILCCSKT 239 (283)
T ss_dssp CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTC-SEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHC-CceEEEEEEcCCcCCCcEEEEEEeCC
Confidence 99888888999999999999999999999999999988888999999999999 56888889999999999999999987
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhhh
Q 019187 290 GPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIES 340 (345)
Q Consensus 290 ~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~~ 340 (345)
+.++.+|++++..++. ..+||||+++|+|+|+||+|++++|++
T Consensus 240 --~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~f~~p~~~~~~~~~ 282 (283)
T 2i7c_A 240 --DTGLTKPNKKLESKEF------ADLKYYNYENHSAAFKLPAFLLKEIEN 282 (283)
T ss_dssp --TTCSSSCSSCCCSGGG------TTCSSCCHHHHHHTTCCCHHHHHHHTT
T ss_pred --CccccCchhhhhhhhh------hcCceECHHHHHHHhcCcHHHHHHhhc
Confidence 3345577765544432 256999999999999999999999863
No 5
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=1e-55 Score=420.82 Aligned_cols=294 Identities=50% Similarity=0.981 Sum_probs=244.3
Q ss_pred CCCCCCcccccCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhc
Q 019187 40 NKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHL 119 (345)
Q Consensus 40 ~~~~~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l 119 (345)
+++..+++.++++||+|..++|||.+++++++++|++++|+||+|.|+++..+|++|++||.+|+++++++.|++|++|+
T Consensus 9 ~~~~~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~y~e~l~~~ 88 (304)
T 2o07_A 9 GPAASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANL 88 (304)
T ss_dssp ---------CBTTEEEECCTTSTTEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHH
T ss_pred CCCCCCCcccccceEEEeccCCCCceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchHHHHHHHHH
Confidence 34556677889999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCC
Q 019187 120 PLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEG 199 (345)
Q Consensus 120 ~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~ 199 (345)
+++.++++++|||||||+|.++++++++++..+|++||+|+.+++.|+++++....++++++++++++|+.+++... .+
T Consensus 89 ~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~ 167 (304)
T 2o07_A 89 PLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN-QD 167 (304)
T ss_dssp HHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC-SS
T ss_pred HHhhCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC-CC
Confidence 98888889999999999999999999997778999999999999999999876433445789999999999998764 68
Q ss_pred CccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCC
Q 019187 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSG 279 (345)
Q Consensus 200 ~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g 279 (345)
+||+|++|++++.++...+++.+||+.++++|+|||+++++..++|.+......+.+.++++| +.+.+++..+|+|++|
T Consensus 168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f-~~v~~~~~~vP~~~~g 246 (304)
T 2o07_A 168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLF-PVVAYAYCTIPTYPSG 246 (304)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHC-SEEEEEEEECTTSGGG
T ss_pred CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhC-CCceeEEEEeccccCc
Confidence 899999999988877667788899999999999999999999889988888889999999999 5688888999999999
Q ss_pred cEEEEEEecCCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhhh
Q 019187 280 VIGFMLCSTEGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIES 340 (345)
Q Consensus 280 ~w~~~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~~ 340 (345)
.|||++||+. +..++.+|++++..++.. ..+|||||+++|+|+|+||+|++++|++
T Consensus 247 ~~g~~~as~~-~~~~~~~~~~~~~~~~~~----~~~~~~y~~~~h~~~f~lp~~~~~~~~~ 302 (304)
T 2o07_A 247 QIGFMLCSKN-PSTNFQEPVQPLTQQQVA----QMQLKYYNSDVHRAAFVLPEFARKALND 302 (304)
T ss_dssp EEEEEEEESS-TTCCSSSCSSCCCHHHHH----HTTCSSCCHHHHHHTTCCCHHHHHHHHC
T ss_pred ceEEEEEeCC-cccccccchhhhhHhhhc----ccCCeEECHHHHHHHhcCcHHHHHHhhc
Confidence 9999999987 333455665444322210 1478999999999999999999999975
No 6
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=6.6e-55 Score=416.95 Aligned_cols=285 Identities=50% Similarity=0.978 Sum_probs=240.8
Q ss_pred ccccCCeeeccc---------------------------CCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEc
Q 019187 47 SSVIPGWFSEIS---------------------------PMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILD 99 (345)
Q Consensus 47 ~~~~~~w~~e~~---------------------------~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lD 99 (345)
+.++++||+|.. +.|||.+++++++++|++++|+||+|.|+++..+|++|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ld 81 (314)
T 2b2c_A 2 NKLHKGWFTEFSPDDLEKMNGASDEEPTKVLKSDGQEMGGAWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLD 81 (314)
T ss_dssp -CBCSSEEEEECSCCC-----------------------CCCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEET
T ss_pred CcccccceEeeccccccccccccccccccccccccccccccCCCceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEEC
Confidence 456889999984 26899999999999999999999999999999999999999
Q ss_pred CeEeeeccchhHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCC
Q 019187 100 GVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFED 179 (345)
Q Consensus 100 g~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~ 179 (345)
|.+|+++++++.|+||++|++++.++++++||+||||+|.++++++++++..+|++||+|+.+++.|+++++..+.++.+
T Consensus 82 g~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~ 161 (314)
T 2b2c_A 82 GIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSH 161 (314)
T ss_dssp TEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGC
T ss_pred CEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCC
Confidence 99999999999999999999988888899999999999999999999977789999999999999999999764333457
Q ss_pred CCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHH
Q 019187 180 PRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCR 259 (345)
Q Consensus 180 ~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~ 259 (345)
++++++++|+.+++... .++||+|++|+++|.++...+++.+|++.++++|+|||+++++.+++|.+.+.++.+.+.++
T Consensus 162 ~rv~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 240 (314)
T 2b2c_A 162 PKLDLFCGDGFEFLKNH-KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNR 240 (314)
T ss_dssp TTEEEECSCHHHHHHHC-TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHH
T ss_pred CCEEEEEChHHHHHHhc-CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHH
Confidence 89999999999998764 68899999999988877778888999999999999999999999999988888999999999
Q ss_pred hhcCCcceEEEEEEeecCCCcEEEEEEecCCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHh
Q 019187 260 QIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVI 338 (345)
Q Consensus 260 ~~F~~~v~~~~~~vP~y~~g~w~~~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~ 338 (345)
++| +.+.+++..+|+|++|+|||++|||+. ...+.+|++++..++.. ..+|||||+++|+|+|+||+|++++|
T Consensus 241 ~vF-~~v~~~~~~iP~~~~g~~g~~~ask~~-~~~~~~~~~~~~~~~~~----~~~~~yy~~~~h~~~f~lp~~~~~~l 313 (314)
T 2b2c_A 241 KIF-PAVTYAQSIVSTYPSGSMGYLICAKNA-NRDVTTPARTLTAEQIK----ALNLRFYNSEVHKAAFVLPQFVKNAL 313 (314)
T ss_dssp HHC-SEEEEEEEECTTSGGGEEEEEEEESST-TCCTTSCSSCCCHHHHH----HTTCSSCCHHHHHHTTCCCHHHHHTC
T ss_pred HHC-CcceEEEEEecCcCCCceEEEEEeCCC-cccccCchhhhhHHhhc----ccCCeEECHHHHHHHccCcHHHHHhh
Confidence 999 568888899999999999999999873 22445676555433321 12789999999999999999999876
No 7
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=1.7e-54 Score=406.77 Aligned_cols=274 Identities=36% Similarity=0.726 Sum_probs=245.0
Q ss_pred CCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCceE
Q 019187 51 PGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKV 130 (345)
Q Consensus 51 ~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~V 130 (345)
++||+|.. +||.+++++++++|++++|+||+|.|+++..+|++|++||..|++++|++.|||||+|++++.++++++|
T Consensus 2 ~~w~~e~~--~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~V 79 (275)
T 1iy9_A 2 ELWYTEKQ--TKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHV 79 (275)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEE
T ss_pred CccEEEec--CCCcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEE
Confidence 47999987 4899999999999999999999999999999999999999999999999999999999998888889999
Q ss_pred EEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCC
Q 019187 131 LVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSD 210 (345)
Q Consensus 131 L~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~ 210 (345)
||||||+|.++++++++++..+|++||+|+.+++.|+++++..+.++.++|++++++|++++++.. .++||+|++|+++
T Consensus 80 LdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~fD~Ii~d~~~ 158 (275)
T 1iy9_A 80 LVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-ENQYDVIMVDSTE 158 (275)
T ss_dssp EEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-CSCEEEEEESCSS
T ss_pred EEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCeeEEEECCCC
Confidence 999999999999999997778999999999999999999976543456789999999999999764 6889999999999
Q ss_pred CCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEEEEecCC
Q 019187 211 PIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEG 290 (345)
Q Consensus 211 p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~~ask~~ 290 (345)
+..++..+++.+||+.++++|+|||+++++.++++.+.+.++.+.++++++| +.+.+++..+|+||+|.|+|++|||+.
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~~~g~w~~~~ask~~ 237 (275)
T 1iy9_A 159 PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIF-PITKLYTANIPTYPSGLWTFTIGSKKY 237 (275)
T ss_dssp CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTC-SEEEEEEECCTTSGGGCEEEEEEESSC
T ss_pred CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhC-CCeEEEEEecCcccCcceEEEEeeCCC
Confidence 8888888999999999999999999999999999888889999999999999 568888899999999999999999974
Q ss_pred CCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhh
Q 019187 291 PPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIE 339 (345)
Q Consensus 291 ~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~ 339 (345)
. |.. ++.+. ....++||||+++|+|+|+||+|++++|+
T Consensus 238 ~------~~~-~~~~~----~~~~~~~~~~~~~~~~~f~lp~~~~~~~~ 275 (275)
T 1iy9_A 238 D------PLA-VEDSR----FFDIETKYYTKDIHKAAFVLPKFVSDLIK 275 (275)
T ss_dssp C------TTC-CCGGG----CCCCCCSSCCHHHHHHTTCCCHHHHTTC-
T ss_pred C------ccc-cchhh----ccccCCeEeCHHHHHHHcCCCHHHHHhhC
Confidence 3 331 22221 23357899999999999999999998763
No 8
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=6.1e-53 Score=400.12 Aligned_cols=281 Identities=33% Similarity=0.661 Sum_probs=241.1
Q ss_pred ccCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCc
Q 019187 49 VIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPK 128 (345)
Q Consensus 49 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~ 128 (345)
+.++||+|..+ |||.+++++++++|++++|+||+|.|+++..+|+.|++||.+|+++++++.|+|+++|++++.+++++
T Consensus 14 ~~~~w~~e~~~-~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~ 92 (296)
T 1inl_A 14 RQHLWYFEYYT-GNNVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPK 92 (296)
T ss_dssp CSSEEEEEECT-TSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCC
T ss_pred CCCceEEEecC-CCCceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcCCCCC
Confidence 77899999876 89999999999999999999999999999999999999999999999999999999999988888899
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcC
Q 019187 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~ 208 (345)
+|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++++|+.+++... .++||+|++|+
T Consensus 93 ~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~ 171 (296)
T 1inl_A 93 KVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNEFDVIIIDS 171 (296)
T ss_dssp EEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC-SSCEEEEEEEC
T ss_pred EEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCceEEEEcC
Confidence 99999999999999999997678999999999999999999865322345689999999999998764 67899999999
Q ss_pred CCC-CCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEEEEe
Q 019187 209 SDP-IGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCS 287 (345)
Q Consensus 209 ~~p-~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~~as 287 (345)
+++ .++...+++.+|++.++++|+|||++++++++++.+.+.+..+.++++++| +.+.++...+|+||+|.|+|++||
T Consensus 172 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~p~g~~~f~~as 250 (296)
T 1inl_A 172 TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVF-PITRVYLGFMTTYPSGMWSYTFAS 250 (296)
T ss_dssp ----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHC-SEEEEEEEECTTSTTSEEEEEEEE
T ss_pred CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHC-CceEEEEeecCccCCCceEEEEec
Confidence 988 667777889999999999999999999999999888888999999999999 567788889999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhhh
Q 019187 288 TEGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIES 340 (345)
Q Consensus 288 k~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~~ 340 (345)
|+. +|..++..++.. ....++||||+++|+|+|+||+|++++|+.
T Consensus 251 ~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~ 295 (296)
T 1inl_A 251 KGI------DPIKDFDPEKVR--KFNKELKYYNEEVHVASFALPNFVKKELGL 295 (296)
T ss_dssp SSC------CTTTTCCHHHHH--TCSSCCSSCCHHHHHHTTCCCHHHHHHTTC
T ss_pred CCC------ChhhhhhhhhHh--hccCCceecCHHHHHHHcCCcHHHHHHHhh
Confidence 874 444333222211 223478999999999999999999999863
No 9
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=8.3e-53 Score=403.60 Aligned_cols=281 Identities=51% Similarity=0.929 Sum_probs=247.8
Q ss_pred ccCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCc
Q 019187 49 VIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPK 128 (345)
Q Consensus 49 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~ 128 (345)
++++||+|..++|||.+++++++++|++++|+||+|.|+++..+|+.|++||.+|++++|++.|+|+++|++++.+++++
T Consensus 39 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~ 118 (321)
T 2pt6_A 39 FSKKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPK 118 (321)
T ss_dssp --CCEEEECCTTSTTCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCC
T ss_pred ccceEEEEeccCCCCceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcCCCCC
Confidence 57899999988899999999999999999999999999999999999999999999999999999999999988888899
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcC
Q 019187 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~ 208 (345)
+|||||||+|.++++++++++..+|++||+|+.+++.|+++++....++++++++++++|+.+++... +++||+|++|+
T Consensus 119 ~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fDvIi~d~ 197 (321)
T 2pt6_A 119 NVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDVIIVDS 197 (321)
T ss_dssp EEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEEEEEEC
T ss_pred EEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-CCCceEEEECC
Confidence 99999999999999999997778999999999999999999876433345689999999999998764 67899999999
Q ss_pred CCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEEEEec
Q 019187 209 SDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCST 288 (345)
Q Consensus 209 ~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~~ask 288 (345)
++|.++...+++.+|++.++++|+|||+++++.++++.+.+.++.+.++++++| +.+.+++..+|+||+|.|+|++|||
T Consensus 198 ~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~~~g~w~f~~as~ 276 (321)
T 2pt6_A 198 SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLF-KKVEYANISIPTYPCGCIGILCCSK 276 (321)
T ss_dssp CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTC-SEEEEEEEECTTSGGGEEEEEEEES
T ss_pred cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHC-CCeEEEEEEeccccCceEEEEEeeC
Confidence 988877778888999999999999999999999888888889999999999999 5688888999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccccCCCCC-CCCcccCHHHHHHHhcCcHHHHHHhhh
Q 019187 289 EGPPVDFKHPVNPIDADDSNCNSSK-GPLKFYNSEIHTAAFCLPTFAKKVIES 340 (345)
Q Consensus 289 ~~~~~~~~~p~~~~~~~~~~~~~~~-~~l~yy~~~~h~a~f~lp~~~~~~~~~ 340 (345)
+..| . +...++.. ... .++||||+++|+|+|+||+|++++|+.
T Consensus 277 ~~~p------~-~~~~~~~~--~~~~~~~~~y~~~~h~~~f~lp~~~~~~~~~ 320 (321)
T 2pt6_A 277 TDTG------L-TKPNKKLE--SKEFADLKYYNYENHSAAFKLPAFLLKEIEN 320 (321)
T ss_dssp STTC------S-SSCSSCCC--SGGGTTCSSCCHHHHHHTTCCCHHHHHHTSC
T ss_pred CCCc------c-chhHHHHH--hccCCCCeEECHHHHHHHhCCcHHHHHHHhh
Confidence 7533 3 12222211 111 478999999999999999999999863
No 10
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=2.1e-52 Score=397.69 Aligned_cols=287 Identities=45% Similarity=0.892 Sum_probs=244.4
Q ss_pred cccccCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEc---CcceEEEEcCeEeeeccchhHHHHHHHhcccc
Q 019187 46 ISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSS---TYGKVLILDGVIQLTERDECAYQEMITHLPLC 122 (345)
Q Consensus 46 ~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~---~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~ 122 (345)
...+.++||+|..++||+.+++++++++|++.+|+||+|.|+++. .+|++|++||.+|+++.+++.|++++++++++
T Consensus 12 ~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~ 91 (304)
T 3bwc_A 12 SELISGGWFREENDQWPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLC 91 (304)
T ss_dssp CCCCTTSEEEECCSSSCSEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTHHHHHHHHHHHHHT
T ss_pred CccccCceEEEeccCCCCceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccchHHHHHHhhhhhh
Confidence 346778999999888999999999999999999999999999999 89999999999999999999999999999988
Q ss_pred cCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 123 SIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 123 ~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.++++++|||||||+|.++++++++++..+|++||+|+.+++.|+++++.....+.+++++++++|+.+++....+++||
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 92 SHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred cCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 88889999999999999999999997778999999999999999999865433346789999999999998752367899
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh-cCCcceEEEEEEeecCCCcE
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGSVNYAWTTVPTYPSGVI 281 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~y~~g~w 281 (345)
+|++|.+++.++...+++.+|++.++++|+|||+++++.++++......+.+.+.++++ | ..+.++...+|+||+|.|
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF-~~v~~~~~~vP~yp~g~w 250 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGF-ASVQYALMHVPTYPCGSI 250 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTC-SEEEEEECCCTTSTTSCC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCC-CcEEEEEeecccccCcce
Confidence 99999999888878899999999999999999999999999888878889999999999 9 557777788999999999
Q ss_pred EEEEEecCCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhh
Q 019187 282 GFMLCSTEGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIE 339 (345)
Q Consensus 282 ~~~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~ 339 (345)
+|++|||+..+ ...+|.+++..++. ..+|||||+++|+|+|+||+|++++|+
T Consensus 251 ~f~~as~~~~~-~~~~~~~~~~~~~~-----~~~~~~y~~~~~~~~f~~p~~~~~~~~ 302 (304)
T 3bwc_A 251 GTLVCSKKAGV-DVTKPLRPVEDMPF-----AKDLKYYDSEMHKASFALPRFARHINN 302 (304)
T ss_dssp EEEEEESSSSC-CTTSCSSCGGGSGG-----GGGCSSCCHHHHHHHTCCCGGGGGGTC
T ss_pred EEEEEeCCccc-cccChhhhhhhhhh-----ccCCeEECHHHHHHHcCCCHHHHHHhc
Confidence 99999987322 23456543423322 237899999999999999999999885
No 11
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=1.1e-50 Score=387.74 Aligned_cols=283 Identities=35% Similarity=0.570 Sum_probs=242.9
Q ss_pred cCCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCce
Q 019187 50 IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKK 129 (345)
Q Consensus 50 ~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~ 129 (345)
+++||+|.. +||.+++++++++|++++|+||+|.|+++..+|++|++||.+|+++.+++.||++++|++++.++++++
T Consensus 3 ~~~w~~e~~--~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~ 80 (314)
T 1uir_A 3 YGMYFFEHV--TPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKR 80 (314)
T ss_dssp SSCEEEEES--SSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCE
T ss_pred CCceEEEEc--CCCcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCe
Confidence 368999987 489999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred EEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccC-CCCCCEEEEEechHhHHhhCCCCCccEEEEcC
Q 019187 130 VLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG-FEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (345)
Q Consensus 130 VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~ 208 (345)
|||||||+|.++++++++++..+|++||+|+.+++.|+++++..+.+ +++++++++++|+.+++... .++||+|++|+
T Consensus 81 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~ 159 (314)
T 1uir_A 81 VLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT-EERYDVVIIDL 159 (314)
T ss_dssp EEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-CCCEEEEEEEC
T ss_pred EEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-CCCccEEEECC
Confidence 99999999999999999977789999999999999999998753222 45789999999999998764 68899999999
Q ss_pred CCCC---CCccccCcHHHHHHHHhccCCCcEEEEeccchh-hhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEE
Q 019187 209 SDPI---GPAQELFEKPFFESVAKALRPGGVVSTQAESIW-LHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 284 (345)
Q Consensus 209 ~~p~---~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~-~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~ 284 (345)
+++. ++...+++.+|++.++++|+|||+++++.++++ .+.+.++.+.++++++| +.+.++...+|+| +|.|+|+
T Consensus 160 ~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vP~~-~g~~~~~ 237 (314)
T 1uir_A 160 TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAF-RYVRSYKNHIPGF-FLNFGFL 237 (314)
T ss_dssp CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTC-SEEEEEEEEEGGG-TEEEEEE
T ss_pred CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHC-CceEEEEEecCCC-CCeEEEE
Confidence 9887 667788899999999999999999999988887 67788899999999999 5678888899999 7899999
Q ss_pred EEecCCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhhhhc
Q 019187 285 LCSTEGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIESKN 342 (345)
Q Consensus 285 ~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~~~~ 342 (345)
+|||+..|..+. |. .+..+.. ....+|||||+++|.|+|+||+|+++.|+...
T Consensus 238 ~as~~~~p~~~~-~~-~~~~~~~---~~~~~~~~~~~~~~~~~f~lp~~~~~~~~~~~ 290 (314)
T 1uir_A 238 LASDAFDPAAFS-EG-VIEARIR---ERNLALRHLTAPYLEAMFVLPKDLLEALEKET 290 (314)
T ss_dssp EEESSSCTTCCC-TT-HHHHHHH---HTTCCCSSCCHHHHHHTTCCCHHHHHHHHHCC
T ss_pred EEECCCCcccCC-HH-HHHHHhh---ccccCccccCHHHHHHHcCCCHHHHHHhhCCC
Confidence 999985443321 11 1111111 12237899999999999999999999987654
No 12
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=6e-51 Score=383.50 Aligned_cols=272 Identities=32% Similarity=0.589 Sum_probs=234.7
Q ss_pred CCeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCceE
Q 019187 51 PGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKV 130 (345)
Q Consensus 51 ~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~V 130 (345)
++||+|.. +||.+++++++++|++++|+||+|.|+++..+|++|++||.+|+++++++.|+|++.|++++.++++++|
T Consensus 2 ~~w~~e~~--~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~V 79 (281)
T 1mjf_A 2 ERAFIEWY--PRGYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRV 79 (281)
T ss_dssp --CEEEEE--GGGEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEE
T ss_pred CccEEEec--CCCceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeE
Confidence 58999987 4899999999999999999999999999999999999999999999999999999999988878889999
Q ss_pred EEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCC-------CCCCEEEEEechHhHHhhCCCCCccE
Q 019187 131 LVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGF-------EDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 131 L~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~-------~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
||||||+|.++++++++ +..+|++||+|+.+++.|++++ ..+.++ .+++++++++|+.+++.. .++||+
T Consensus 80 LdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~--~~~fD~ 155 (281)
T 1mjf_A 80 LVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN--NRGFDV 155 (281)
T ss_dssp EEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH--CCCEEE
T ss_pred EEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc--cCCeeE
Confidence 99999999999999999 6789999999999999999998 443234 568999999999999875 578999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEE
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGF 283 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~ 283 (345)
|++|+++|.++...+++.+|++.++++|+|||+++++.++++...+.++.+.++++++| +.+.++...+|+| +|.|+|
T Consensus 156 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f-~~v~~~~~~vP~~-~g~~~~ 233 (281)
T 1mjf_A 156 IIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVF-DRVYYYSFPVIGY-ASPWAF 233 (281)
T ss_dssp EEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHC-SEEEEEEECCTTS-SSSEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHC-CceEEEEEecCCC-CceEEE
Confidence 99999998877778889999999999999999999999888888888999999999999 5677777889999 789999
Q ss_pred EEEecCCCCCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhhh
Q 019187 284 MLCSTEGPPVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIES 340 (345)
Q Consensus 284 ~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~~ 340 (345)
++|||+. .+|. +++.++.. ..+|||||+++|+|+|+||+|++++|+.
T Consensus 234 ~~as~~~-----~~~~-~~~~~~~~----~~~~~~~~~~~~~~~f~~p~~~~~~~~~ 280 (281)
T 1mjf_A 234 LVGVKGD-----IDFT-KIDRERAK----KLQLEYYDPLMHETLFQMPKYIRETLQR 280 (281)
T ss_dssp EEEEESS-----CCTT-CCCHHHHH----TSCCSSCCGGGGGGGGCCCHHHHHHHC-
T ss_pred EEeeCCC-----CCcc-ccchhhhh----ccCCcEECHHHHHHHhcCcHHHHHHHhh
Confidence 9999972 2344 23322211 1478999999999999999999999864
No 13
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=1.2e-50 Score=378.33 Aligned_cols=260 Identities=19% Similarity=0.283 Sum_probs=227.7
Q ss_pred CeeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhcccccCCCCceEE
Q 019187 52 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVL 131 (345)
Q Consensus 52 ~w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VL 131 (345)
+||+|.. |||.+++++++++|++++|+||+|.|++++.+|++|++||. |+++.|++.||||++|++++.++++++||
T Consensus 1 ~w~~e~~--~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL 77 (262)
T 2cmg_A 1 MWITQEI--TPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVL 77 (262)
T ss_dssp CEEEEEE--ETTEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEE
T ss_pred CcEEEEc--CCCceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEE
Confidence 5999987 58999999999999999999999999999999999999999 99999999999999999998888899999
Q ss_pred EEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCC
Q 019187 132 VIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDP 211 (345)
Q Consensus 132 ~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p 211 (345)
+||||+|.++++++++ + .+|++||+|+.+++.|+++++....++.++|++++++|+.+++ ++||+|++|+++|
T Consensus 78 ~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~fD~Ii~d~~dp 150 (262)
T 2cmg_A 78 IVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KKYDLIFCLQEPD 150 (262)
T ss_dssp EESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CCEEEEEESSCCC
T ss_pred EEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hhCCEEEECCCCh
Confidence 9999999999999999 6 8999999999999999999876432346789999999999885 6799999998765
Q ss_pred CCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEEEEEecCCC
Q 019187 212 IGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGP 291 (345)
Q Consensus 212 ~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~~~ask~~~ 291 (345)
..||+.++++|+|||+++++.++++.+...+..+.++++++| +.+.++...+|+ +|.|+|++|||+.
T Consensus 151 ---------~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~~~~~~~~vP~--~g~~~~~~as~~~- 217 (262)
T 2cmg_A 151 ---------IHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVF-SVAMPFVAPLRI--LSNKGYIYASFKT- 217 (262)
T ss_dssp ---------HHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTC-SEEEEECCTTCT--TCCEEEEEEESSC-
T ss_pred ---------HHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhC-CceEEEEEccCC--CcccEEEEeeCCC-
Confidence 249999999999999999999888887778899999999999 556676677888 6899999999974
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCcccCHHHHHHHhcCcHHHHHHhhhhc
Q 019187 292 PVDFKHPVNPIDADDSNCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIESKN 342 (345)
Q Consensus 292 ~~~~~~p~~~~~~~~~~~~~~~~~l~yy~~~~h~a~f~lp~~~~~~~~~~~ 342 (345)
+|.++++.++.+ .. .++||||+++|+|+|+||+|++++|++..
T Consensus 218 -----~p~~~~~~~~~~--~~-~~~~~y~~~~h~~~f~lp~~~~~~l~~~~ 260 (262)
T 2cmg_A 218 -----HPLKDLMTPKIE--AL-TSVRYYNEDIHRAAFALPKNLQEVFKDNI 260 (262)
T ss_dssp -----CTTTTCCHHHHT--TC-CSCSSCCHHHHHHTTCCCHHHHHHGGGTC
T ss_pred -----CchhhcCHhHhh--cc-CCCcEECHHHHHHHcCCCHHHHHHHHHHh
Confidence 344333332222 11 57899999999999999999999998765
No 14
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=2e-48 Score=376.98 Aligned_cols=242 Identities=24% Similarity=0.392 Sum_probs=207.2
Q ss_pred CCCcccccCC-eeecccCCCCCceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHHHhccc
Q 019187 43 PDCISSVIPG-WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPL 121 (345)
Q Consensus 43 ~~~~~~~~~~-w~~e~~~~~~~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l~~l~l 121 (345)
.+.++++++| |+..+.+.++|..++|+++++||+++|+||+|.|+++..+||+|+|||.+|++++| +.|||||+|+++
T Consensus 123 ~~~~~~~~rg~~~~~~~p~sdg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l 201 (381)
T 3c6k_A 123 VKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK 201 (381)
T ss_dssp EECCCCEEESCSSCCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC
T ss_pred hcccCccccCCccCceeECCCCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHHh
Confidence 4668888875 67766555679999999999999999999999999999999999999999999999 679999999998
Q ss_pred ccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccC-CC---CCCEEEEEechHhHHhhC-
Q 019187 122 CSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG-FE---DPRVTLHIGDGVAFLKAV- 196 (345)
Q Consensus 122 ~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~-~~---~~rv~v~~~D~~~~l~~~- 196 (345)
+.+ +|++||+||+|+|++++++++|++ ++|++||||++|+++|+++|+..+.+ ++ ++|++++++||++|+++.
T Consensus 202 ~~~-~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~ 279 (381)
T 3c6k_A 202 EDY-TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 279 (381)
T ss_dssp CCC-TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred hcC-CCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhh
Confidence 765 589999999999999999999975 89999999999999999999876432 33 467999999999999753
Q ss_pred -CCCCccEEEEcCCCC------CCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceE-
Q 019187 197 -PEGTYDAVIVDSSDP------IGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNY- 268 (345)
Q Consensus 197 -~~~~yDvIi~D~~~p------~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~- 268 (345)
..++||+||+|++++ .+++..||+++||+.|+++|+|||++++|+++++.. +.++.+.++++++|+ .+.+
T Consensus 280 ~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~~~~~i~~tl~~vF~-~v~~~ 357 (381)
T 3c6k_A 280 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT-EALSLYEEQLGRLYC-PVEFS 357 (381)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH-HHHHHHHHHHTTSSS-CEEEE
T ss_pred hccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcch-hHHHHHHHHHHHhCC-cceEe
Confidence 246899999998763 344567999999999999999999999999999874 667889999999994 4543
Q ss_pred -EEEEEeecCCCcEEEEEEecCC
Q 019187 269 -AWTTVPTYPSGVIGFMLCSTEG 290 (345)
Q Consensus 269 -~~~~vP~y~~g~w~~~~ask~~ 290 (345)
+++.||+|| |.|+|++|||+.
T Consensus 358 ~~~~~VPSy~-~~W~F~~aSK~~ 379 (381)
T 3c6k_A 358 KEIVCVPSYL-ELWVFYTVWKKA 379 (381)
T ss_dssp EEEECCGGGS-SCEEEEEEEECC
T ss_pred eEEEEecCCC-CceeeeEEECCC
Confidence 457899998 589999999985
No 15
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=2.5e-44 Score=347.12 Aligned_cols=243 Identities=26% Similarity=0.448 Sum_probs=205.7
Q ss_pred CCCCCCcccccCCeeecccCCCC---CceeEeecccEEEEeeCCCceEEEEEEcCcceEEEEcCeEeeeccchhHHHHHH
Q 019187 40 NKQPDCISSVIPGWFSEISPMWP---GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMI 116 (345)
Q Consensus 40 ~~~~~~~~~~~~~w~~e~~~~~~---~~~~~~~~~~~l~~~~s~yq~i~v~e~~~~g~~L~lDg~~q~~~~de~~Y~e~l 116 (345)
...+|++|+|++|| ++..+|| |.+++++++++|++++|+||+|.|+++..+|++|+|||.+|++++| +.|||||
T Consensus 103 ~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l 179 (364)
T 2qfm_A 103 TGRVKRLPPIVRGG--AIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAI 179 (364)
T ss_dssp --CEECCCCEEESC--SSCCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHH
T ss_pred ccccccCCCccCCC--ccCceeEccCCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHH
Confidence 44679999999997 4556688 5789999999999999999999999999999999999999999999 9999999
Q ss_pred HhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccccc-CCCCC---CEEEEEechHhH
Q 019187 117 THLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDP---RVTLHIGDGVAF 192 (345)
Q Consensus 117 ~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~---rv~v~~~D~~~~ 192 (345)
+|+++ .+++|++||+||||+|+++++++++++ .+|++||||+.++++|+++|+..+. .++++ |++++++|+++|
T Consensus 180 ~~~~~-~~p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~ 257 (364)
T 2qfm_A 180 MGSGK-EDYTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV 257 (364)
T ss_dssp TTTTC-CCCTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH
T ss_pred hhhhh-hCCCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH
Confidence 99988 678999999999999999999999975 8999999999999999999986543 24554 899999999999
Q ss_pred HhhC--CCCCccEEEEcCCC-CCCC-ccccCcHHHHHHH----HhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCC
Q 019187 193 LKAV--PEGTYDAVIVDSSD-PIGP-AQELFEKPFFESV----AKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKG 264 (345)
Q Consensus 193 l~~~--~~~~yDvIi~D~~~-p~~~-~~~l~t~ef~~~v----~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~ 264 (345)
+++. ..++||+||+|+++ |.+. +..|++.+||+.+ +++|+|||++++|+++++. .+.+..+-+.+++.| +
T Consensus 258 L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~~~~~~~~l~~~F-~ 335 (364)
T 2qfm_A 258 LKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYEEQLGRLY-C 335 (364)
T ss_dssp HHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHHHHHTTSS-S
T ss_pred HHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHHHHHHHHHHHHhC-C
Confidence 9852 25789999999998 7653 2358999999999 8999999999999988876 344433334599999 4
Q ss_pred cceE--EEEEEeecCCCcEEEEEEecCC
Q 019187 265 SVNY--AWTTVPTYPSGVIGFMLCSTEG 290 (345)
Q Consensus 265 ~v~~--~~~~vP~y~~g~w~~~~ask~~ 290 (345)
.|.+ +...||+|++ .|+|..|+|+.
T Consensus 336 ~v~~~~~~~~vPsy~~-~w~f~~~~k~~ 362 (364)
T 2qfm_A 336 PVEFSKEIVCVPSYLE-LWVFYTVWKKA 362 (364)
T ss_dssp CEEEEEEEECCGGGSS-CEEEEEEEECC
T ss_pred ceEEeeEeeecCCchh-heEeEEeeccc
Confidence 5767 7789999985 99999999973
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=3.9e-33 Score=265.77 Aligned_cols=232 Identities=17% Similarity=0.210 Sum_probs=182.7
Q ss_pred CCceEEEEEEc--CcceEEEEcCeEeeec------cchhHHHHHHHhcccc---cCCCCc--eEEEEeccchHHHHHHHh
Q 019187 80 DYQNVMVFQSS--TYGKVLILDGVIQLTE------RDECAYQEMITHLPLC---SIPNPK--KVLVIGGGDGGVLREVSR 146 (345)
Q Consensus 80 ~yq~i~v~e~~--~~g~~L~lDg~~q~~~------~de~~Y~e~l~~l~l~---~~~~~~--~VL~IG~G~G~~~~~ll~ 146 (345)
.|...+|.... .+|++|+|||.+|++. .+++.|||+|+|++++ .+++++ +||+||||+|.+++++++
T Consensus 30 ~~~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~ 109 (317)
T 3gjy_A 30 EYSVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFAD 109 (317)
T ss_dssp SSSEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHH
T ss_pred eeeeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHH
Confidence 34447777765 3899999999999985 5899999999999987 577776 999999999999999999
Q ss_pred cCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHH
Q 019187 147 HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFES 226 (345)
Q Consensus 147 ~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~ 226 (345)
+.+..+|++||||+.|++.||++|+.. .++|++++++|+++|++..+.++||+||+|++++...+..|++.+||+.
T Consensus 110 ~~p~~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~ 185 (317)
T 3gjy_A 110 VYPQSRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEH 185 (317)
T ss_dssp HSTTCEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHH
T ss_pred HCCCcEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHH
Confidence 433458999999999999999999754 5789999999999999865468899999999998877788999999999
Q ss_pred HHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcEEE--EEEecCCCCCCCCCCC-----
Q 019187 227 VAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGF--MLCSTEGPPVDFKHPV----- 299 (345)
Q Consensus 227 v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w~~--~~ask~~~~~~~~~p~----- 299 (345)
|+++|+|||+|++|..+. .....++.++++++++| +.+..+....|.+. ..||. ++||+..- |.
T Consensus 186 ~~r~LkpgGvlv~~~~~~-~~~~~~~~~~~tL~~vF-~~v~~~~~~~~~~g-~~~gN~Vl~As~~pl------p~~~~~~ 256 (317)
T 3gjy_A 186 CHRGLAPGGLYVANCGDH-SDLRGAKSELAGMMEVF-EHVAVIADPPMLKG-RRYGNIILMGSDTEF------FSSNSTE 256 (317)
T ss_dssp HHHHEEEEEEEEEEEEEC-TTCHHHHHHHHHHHHHC-SEEEEEECHHHHTT-SSCEEEEEEEESSCC------CCTTSHH
T ss_pred HHHhcCCCcEEEEEecCC-cchHHHHHHHHHHHHHC-CceEEEEecCCCCC-CcCceEEEEEECCCC------Ccccccc
Confidence 999999999999998654 23467789999999999 44544433345442 24544 88988642 22
Q ss_pred -CCCCcccccCCCCCCCCcccCHHHHHHH
Q 019187 300 -NPIDADDSNCNSSKGPLKFYNSEIHTAA 327 (345)
Q Consensus 300 -~~~~~~~~~~~~~~~~l~yy~~~~h~a~ 327 (345)
..+..+.. ....+.+|++++.+.+.
T Consensus 257 ~~~l~r~~~---~~~~p~~~~~~~~l~~~ 282 (317)
T 3gjy_A 257 ASAITRELL---GGGVPAQYKDESWVRKF 282 (317)
T ss_dssp HHHHHHHHT---SSSSCCEEECHHHHHHH
T ss_pred hHHHHHHHc---CCCCCeEEECHHHHHHH
Confidence 11111111 23567899999887654
No 17
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=4.4e-15 Score=135.18 Aligned_cols=124 Identities=18% Similarity=0.210 Sum_probs=96.5
Q ss_pred chhHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe
Q 019187 108 DECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG 187 (345)
Q Consensus 108 de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~ 187 (345)
.+..|.+.++... .+...||||||||+|.++..++++. ..+|++||+++.+++.|++++.. ...+++++.+
T Consensus 45 we~~~m~~~a~~~---~~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~-----~~~~~~~~~~ 115 (236)
T 3orh_A 45 WETPYMHALAAAA---SSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPR-----QTHKVIPLKG 115 (236)
T ss_dssp GGHHHHHHHHHHH---TTTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGG-----CSSEEEEEES
T ss_pred HHHHHHHHHHHhh---ccCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhh-----CCCceEEEee
Confidence 3445555554432 2467899999999999999999885 36899999999999999998765 3468999999
Q ss_pred chHhHHhhCCCCCccEEEEcCCCCCCCcccc-CcHHHHHHHHhccCCCcEEEEe
Q 019187 188 DGVAFLKAVPEGTYDAVIVDSSDPIGPAQEL-FEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 188 D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l-~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|+.+.+...++++||.|+.|.........++ ....++++++|+|||||+|+..
T Consensus 116 ~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 116 LWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred hHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 9998887777789999999876533222221 1357899999999999999874
No 18
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.60 E-value=1.9e-14 Score=131.88 Aligned_cols=149 Identities=19% Similarity=0.228 Sum_probs=106.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCC-CCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP-EGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~yDv 203 (345)
++++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++... ++ .++++++.+|+.+++.... .++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA--GV-DQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 568999999999999999998743 679999999999999999988653 22 2489999999999887652 248999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhh--------hh---hHHHHHHHHHHhhcCCcceEEEEE
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWL--------HM---HIIEDIVANCRQIFKGSVNYAWTT 272 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~--------~~---~~~~~i~~~l~~~F~~~v~~~~~~ 272 (345)
|++|...+. ...+++.+.++|+|||++++.... +. .. ..++.+.+.+... ..+....
T Consensus 140 V~~d~~~~~-------~~~~l~~~~~~LkpGG~lv~~~~~-~~g~v~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~ 207 (248)
T 3tfw_A 140 IFIDADKPN-------NPHYLRWALRYSRPGTLIIGDNVV-RDGEVVNPQSADERVQGVRQFIEMMGAE----PRLTATA 207 (248)
T ss_dssp EEECSCGGG-------HHHHHHHHHHTCCTTCEEEEECCS-GGGGGGCTTCCCHHHHHHHHHHHHHHHC----TTEEEEE
T ss_pred EEECCchHH-------HHHHHHHHHHhcCCCeEEEEeCCC-cCCcccCccccchHHHHHHHHHHHHhhC----CCEEEEE
Confidence 999874211 257999999999999999986422 11 01 1233444444331 2233344
Q ss_pred EeecC-CCcEEEEEEecC
Q 019187 273 VPTYP-SGVIGFMLCSTE 289 (345)
Q Consensus 273 vP~y~-~g~w~~~~ask~ 289 (345)
+|... .+.-||.++.++
T Consensus 208 l~~~g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 208 LQTVGTKGWDGFTLAWVN 225 (248)
T ss_dssp EEECSTTCSEEEEEEEEC
T ss_pred eecCCCCCCCeeEEEEEe
Confidence 54332 245799999876
No 19
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.58 E-value=2.5e-14 Score=127.91 Aligned_cols=150 Identities=18% Similarity=0.203 Sum_probs=105.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCC---CCCc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP---EGTY 201 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~---~~~y 201 (345)
.+++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++... ++ ..+++++.+|+.+.+.... .++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA--NL-NDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 568999999999999999998744 579999999999999999988653 22 3479999999988765421 2679
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhh-------hh---hHHHHHHHHHHhhcCCcceEEEE
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWL-------HM---HIIEDIVANCRQIFKGSVNYAWT 271 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~-------~~---~~~~~i~~~l~~~F~~~v~~~~~ 271 (345)
|+|++|...+ ....+++.+.++|+|||++++....... .. ..+..+.+.++.. ..+...
T Consensus 135 D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~ 203 (223)
T 3duw_A 135 DFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAE----PRVSAT 203 (223)
T ss_dssp SEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHC----TTEEEE
T ss_pred CEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhC----CCeEEE
Confidence 9999987532 1358999999999999999986421110 01 2234444444331 223445
Q ss_pred EEee-cCCCcEEEEEEecC
Q 019187 272 TVPT-YPSGVIGFMLCSTE 289 (345)
Q Consensus 272 ~vP~-y~~g~w~~~~ask~ 289 (345)
.+|. ...|.-||.++.++
T Consensus 204 ~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 204 ALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp EEEEEETTEEEEEEEEEEC
T ss_pred EEeccCCCCCCeeEEEEEe
Confidence 5665 23345688888753
No 20
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.58 E-value=1.4e-14 Score=130.78 Aligned_cols=104 Identities=15% Similarity=0.210 Sum_probs=87.6
Q ss_pred eEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEc
Q 019187 129 KVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVD 207 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D 207 (345)
+|||||||+|..+..+++. ++..+|++||+|+.+++.|++++... ++.+++++++.+|+.+++...++++||+|++|
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--GYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 9999999999999999985 44679999999999999999998764 33335899999999999876546889999998
Q ss_pred CCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 208 SSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 208 ~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
..... ..++++.+.++|+|||++++..
T Consensus 137 ~~~~~-------~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 137 VSPMD-------LKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCTTT-------HHHHHHHHHHHEEEEEEEEETT
T ss_pred CcHHH-------HHHHHHHHHHHcCCCcEEEEeC
Confidence 65321 2479999999999999999853
No 21
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.57 E-value=1.1e-14 Score=132.75 Aligned_cols=150 Identities=19% Similarity=0.287 Sum_probs=106.5
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-----CC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-----PE 198 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-----~~ 198 (345)
.++++|||||||+|..+..+++. ++..+|+++|+++.+++.|++++... ++ .++++++.+|+.+++... +.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--GV-EHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhccCCC
Confidence 36789999999999999999987 43679999999999999999998753 33 358999999999887643 14
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc----chhhh----hh----HHHHHHHHHHhhcCCcc
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE----SIWLH----MH----IIEDIVANCRQIFKGSV 266 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~----s~~~~----~~----~~~~i~~~l~~~F~~~v 266 (345)
++||+|++|.... ....+++.+.++|+|||++++... ..... .. ....+.+..+.++ ...
T Consensus 146 ~~fD~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~-~~~ 217 (237)
T 3c3y_A 146 GSYDFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLA-ADP 217 (237)
T ss_dssp TCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHH-HCT
T ss_pred CCcCEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHh-cCC
Confidence 7899999986422 135899999999999999998642 11111 01 1223333333344 234
Q ss_pred eEEEEEEeecCCCcEEEEEEecC
Q 019187 267 NYAWTTVPTYPSGVIGFMLCSTE 289 (345)
Q Consensus 267 ~~~~~~vP~y~~g~w~~~~ask~ 289 (345)
.+....+|.+ .|+.++.|.
T Consensus 218 ~~~~~~lp~~----dG~~~~~~~ 236 (237)
T 3c3y_A 218 RIEIVHLPLG----DGITFCRRL 236 (237)
T ss_dssp TEEEEEECST----TCEEEEEEC
T ss_pred CeEEEEEEeC----CceEEEEEc
Confidence 4556777864 256777653
No 22
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.57 E-value=2e-14 Score=125.56 Aligned_cols=110 Identities=18% Similarity=0.182 Sum_probs=88.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
...++|||+|||+|.++.++++. +..+|+++|+|+.+++.|++++... ++ ++++++.+|+.+++...+.++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEAL--GL--SGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHH--TC--SCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHc--CC--CceEEEEccHHHHHhhccCCCccEE
Confidence 35679999999999999988876 3568999999999999999988764 22 5899999999998765546889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHh--ccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAK--ALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r--~LkpgGvlv~~~~ 242 (345)
++|.+..... . ...++++.+.+ +|+|||+++++..
T Consensus 118 ~~~~p~~~~~-~--~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNVDS-A--DVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTSCH-H--HHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCcch-h--hHHHHHHHHHhcCccCCCeEEEEEec
Confidence 9986533210 1 13578889988 9999999999753
No 23
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.56 E-value=4.3e-14 Score=128.02 Aligned_cols=104 Identities=23% Similarity=0.350 Sum_probs=87.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHh-hCCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK-AVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~-~~~~~~yDvI 204 (345)
++++|||||||+|..+..+++..+..+|++||+++.+++.|++++... ++ .++++++.+|+.+++. .. .++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~-~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY--HF-ENQVRIIEGNALEQFENVN-DKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--TC-TTTEEEEESCGGGCHHHHT-TSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECCHHHHHHhhc-cCCccEE
Confidence 568999999999999999998655689999999999999999988654 22 2489999999998876 55 6889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++|..... ...+++.+.+.|+|||++++.
T Consensus 147 ~~~~~~~~-------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKAQ-------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSSS-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCcHHH-------HHHHHHHHHHhcCCCeEEEEe
Confidence 99865321 357999999999999999984
No 24
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.56 E-value=1.8e-14 Score=132.25 Aligned_cols=107 Identities=21% Similarity=0.317 Sum_probs=87.7
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-----CC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-----PE 198 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-----~~ 198 (345)
.++++|||||||+|..+..+++. ++..+|++||+++.+++.|++++... ++ .++++++.+|+.+++... +.
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA--GV-DHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCeEEEECCHHHHHHHHHhccCCC
Confidence 35789999999999999999987 33679999999999999999988753 22 358999999999876543 14
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++||+|++|.... ....+++.+.++|+|||++++..
T Consensus 155 ~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 155 GSYDFIFVDADKD-------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TCBSEEEECSCST-------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCEEEEEEcCchH-------HHHHHHHHHHHhCCCCeEEEEec
Confidence 7899999986532 13589999999999999999854
No 25
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.55 E-value=1.6e-14 Score=128.23 Aligned_cols=104 Identities=20% Similarity=0.297 Sum_probs=86.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
++++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++... ++ .++++++.+|+.+++... .+ ||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~-~~-fD~v 130 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN--GL-IDRVELQVGDPLGIAAGQ-RD-IDIL 130 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--SG-GGGEEEEESCHHHHHTTC-CS-EEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CC-CceEEEEEecHHHHhccC-CC-CCEE
Confidence 568999999999999999998743 679999999999999999987653 22 347999999999887654 46 9999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++|.... ....+++.+.++|+|||++++..
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 131 FMDCDVF-------NGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEETTTS-------CHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEcCChh-------hhHHHHHHHHHhcCCCeEEEEEC
Confidence 9985421 23689999999999999999853
No 26
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.54 E-value=4.3e-14 Score=127.43 Aligned_cols=114 Identities=21% Similarity=0.246 Sum_probs=93.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~yDvI 204 (345)
...+|||||||+|..+..+++..+..+|++||+++.+++.|+++.... .-.+++++.+|+.+++.. .++++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~----~l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE----GLSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT----TCSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh----CCCcEEEEECCHHHHHHHHcCCCChheE
Confidence 456899999999999999998766678999999999999999887543 234799999999998664 457899999
Q ss_pred EEcCCCCCCCc----cccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 205 IVDSSDPIGPA----QELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 205 i~D~~~p~~~~----~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
++..++|+... ..+...++++.++++|+|||++++.+..
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99887876543 2345568999999999999999987644
No 27
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.53 E-value=9.9e-14 Score=123.66 Aligned_cols=114 Identities=19% Similarity=0.317 Sum_probs=91.6
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|.++..+++..+..++++||+++.+++.|++++... + -++++++.+|+.++....+.++||+|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~--~--~~~v~~~~~d~~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV--G--VPNIKLLWVDGSDLTDYFEDGEIDRLY 116 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--C--CSSEEEEECCSSCGGGTSCTTCCSEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--C--CCCEEEEeCCHHHHHhhcCCCCCCEEE
Confidence 457899999999999999998765679999999999999999987653 2 258999999998754323467899999
Q ss_pred EcCCCCCCCc----cccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 206 VDSSDPIGPA----QELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 206 ~D~~~p~~~~----~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
++.++|+... ..+....+++.+.++|+|||++++.+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred EECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9987765321 2234578999999999999999987643
No 28
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.53 E-value=1.5e-13 Score=123.03 Aligned_cols=114 Identities=18% Similarity=0.229 Sum_probs=92.0
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|.++..+++..+..+|++||+++.+++.|++++... .-++++++.+|+.++....+++.||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~----~~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS----EAQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS----CCSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc----CCCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 456899999999999999998756679999999999999999987543 2257999999998754334467899999
Q ss_pred EcCCCCCCCc----cccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 206 VDSSDPIGPA----QELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 206 ~D~~~p~~~~----~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+..++|+... ..+....+++.++++|+|||.+++.+..
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9887776432 2344678999999999999999987543
No 29
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.52 E-value=5e-13 Score=115.46 Aligned_cols=125 Identities=13% Similarity=0.233 Sum_probs=94.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++. ..+++++|+++.+++.+++++... +..+.+++++.+|+.+.+. .++||+|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~~~~---~~~~D~v 123 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLN--NLDNYDIRVVHSDLYENVK---DRKYNKI 123 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHT--TCTTSCEEEEECSTTTTCT---TSCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECchhcccc---cCCceEE
Confidence 35679999999999999999988 569999999999999999987653 2232359999999877543 5789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcC
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFK 263 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~ 263 (345)
+++....... . ....+++.+.++|+|||++++...+. .....+.+.+++.|.
T Consensus 124 ~~~~~~~~~~-~--~~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~~~ 175 (194)
T 1dus_A 124 ITNPPIRAGK-E--VLHRIIEEGKELLKDNGEIWVVIQTK----QGAKSLAKYMKDVFG 175 (194)
T ss_dssp EECCCSTTCH-H--HHHHHHHHHHHHEEEEEEEEEEEEST----HHHHHHHHHHHHHHS
T ss_pred EECCCcccch-h--HHHHHHHHHHHHcCCCCEEEEEECCC----CChHHHHHHHHHHhc
Confidence 9876433211 1 12578999999999999999876443 223446666777773
No 30
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.51 E-value=1.9e-14 Score=131.76 Aligned_cols=106 Identities=18% Similarity=0.337 Sum_probs=86.7
Q ss_pred CCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC----CCCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV----PEGT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~----~~~~ 200 (345)
++++|||||||+|..+..+++.. +..+|++||+++.+++.|++++... ++ .++++++.+|+.+++... ..++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA--KQ-EHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT--TC-TTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 57899999999999999999863 3679999999999999999988654 22 358999999999887642 1378
Q ss_pred ccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
||+|++|.... ....+++.+.++|+|||++++..
T Consensus 137 fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 137 FDFIFIDADKT-------NYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEEEEEESCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EeEEEEcCChH-------HhHHHHHHHHHhcCCCeEEEEEC
Confidence 99999986521 13578999999999999999853
No 31
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=2e-13 Score=126.08 Aligned_cols=132 Identities=15% Similarity=0.268 Sum_probs=95.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccc-cCCCCCCEEEEEechHhHHh-----hCCC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVA-VGFEDPRVTLHIGDGVAFLK-----AVPE 198 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~-~~~~~~rv~v~~~D~~~~l~-----~~~~ 198 (345)
....+|||||||+|.++..++++.+..+|++||+++.+++.|++++.... .++. .+++++.+|+.++.. ..+.
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~-~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS-ARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG-GGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc-ceEEEEeCCHHHHhhhhhhhccCC
Confidence 35679999999999999999988656799999999999999999886510 1222 379999999988743 1235
Q ss_pred CCccEEEEcCCCCCCC--------------ccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhc
Q 019187 199 GTYDAVIVDSSDPIGP--------------AQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIF 262 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~--------------~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F 262 (345)
++||+|+++++..... ........+++.+.++|+|||.+++... ...+..+++.+++.|
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-----~~~~~~~~~~l~~~~ 186 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR-----PQSVAEIIAACGSRF 186 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC-----GGGHHHHHHHHTTTE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc-----HHHHHHHHHHHHhcC
Confidence 7899999985432110 0011136789999999999999987432 223455666666656
No 32
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.50 E-value=1.6e-13 Score=122.62 Aligned_cols=106 Identities=20% Similarity=0.374 Sum_probs=86.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCC----CC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE----GT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~----~~ 200 (345)
.+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ ..+++++.+|+.+++..... ++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA--GL-SDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC--CC-CCceEEEeCCHHHHHHHhhhccCCCC
Confidence 567999999999999999998643 679999999999999999988653 22 24799999999888754311 78
Q ss_pred ccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
||+|++|.... ....+++.+.++|+|||++++..
T Consensus 141 fD~v~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 141 YDLIYIDADKA-------NTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCHH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999887421 13578999999999999998854
No 33
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.48 E-value=1.7e-13 Score=123.93 Aligned_cols=111 Identities=18% Similarity=0.218 Sum_probs=85.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++.. ..+|++||+++.+++.|+++.... ..+++++.+|+.+.+...++++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 356799999999999999998764 358999999999999999987643 36899999999987655556899999
Q ss_pred EEcCCCCCCCccccC-cHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELF-EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~-t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++|............ ...+++.++++|||||+|++..
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 996443211111110 1357899999999999998743
No 34
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.48 E-value=1.6e-13 Score=127.10 Aligned_cols=108 Identities=15% Similarity=0.193 Sum_probs=83.8
Q ss_pred CCCCceEEEEeccchHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCc
Q 019187 124 IPNPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (345)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~ll~~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~y 201 (345)
.+...+|||||||+|..+..++++. +..+|++||+++.|++.|++++... + ...+++++++|+.++ +.+.|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~--~-~~~~v~~~~~D~~~~----~~~~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY--K-APTPVDVIEGDIRDI----AIENA 140 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS--C-CSSCEEEEESCTTTC----CCCSE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh--c-cCceEEEeecccccc----ccccc
Confidence 4456799999999999999998863 3458999999999999999987653 1 235899999997654 35679
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|+|++...-...+... ...++++++++|||||+|++.
T Consensus 141 d~v~~~~~l~~~~~~~--~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSE--RQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp EEEEEESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceeeeeeeecCchh--HhHHHHHHHHHcCCCcEEEEE
Confidence 9999865443222211 246899999999999999874
No 35
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.47 E-value=2.6e-13 Score=123.72 Aligned_cols=118 Identities=20% Similarity=0.155 Sum_probs=88.6
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccc--cCCCCCCEEEEEechHhHHhh-CCCCCcc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVA--VGFEDPRVTLHIGDGVAFLKA-VPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~--~~~~~~rv~v~~~D~~~~l~~-~~~~~yD 202 (345)
+..+|||||||+|.++..+++..+...|++||+++.+++.|++.+.... ......+++++.+|+.+++.. .++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 4568999999999999999987666799999999999999987654210 001235799999999875542 3468899
Q ss_pred EEEEcCCCCCCC----ccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 203 AVIVDSSDPIGP----AQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 203 vIi~D~~~p~~~----~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
.|++..++|+.. ...+....+++.++++|+|||.|++.+..
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 999988777632 22344568999999999999999987644
No 36
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.46 E-value=1.3e-13 Score=122.29 Aligned_cols=110 Identities=17% Similarity=0.239 Sum_probs=85.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCC-ccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT-YDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~-yDvI 204 (345)
...+|||+|||+|.++.++++.. ..+|++||+|+.+++.|++++... ++..++++++.+|+.+++...+.++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTL--KCSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHT--TCCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHh--CCCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 45799999999999999977763 468999999999999999988654 2222589999999998865433578 9999
Q ss_pred EEcCCCCCCCccccCcHHHHHHH--HhccCCCcEEEEeccc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESV--AKALRPGGVVSTQAES 243 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v--~r~LkpgGvlv~~~~s 243 (345)
++|.+-. . . ...++++.+ .++|+|||++++....
T Consensus 130 ~~~~~~~--~-~--~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 130 FLDPPFH--F-N--LAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EECCCSS--S-C--HHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred EECCCCC--C-c--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 9986622 1 1 124677888 6689999999986543
No 37
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.46 E-value=7.9e-13 Score=113.29 Aligned_cols=106 Identities=18% Similarity=0.187 Sum_probs=84.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+..+|+++|+++.+++.|++++... +. ..++ ++.+|+.+.+... .++||+|
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~-~~~~d~~~~~~~~-~~~~D~i 98 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL--GV-SDRI-AVQQGAPRAFDDV-PDNPDVI 98 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--TC-TTSE-EEECCTTGGGGGC-CSCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--CC-CCCE-EEecchHhhhhcc-CCCCCEE
Confidence 3567999999999999999998866689999999999999999987654 22 2378 8889987766543 3789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+++..... ..+++.+.+.|+|||++++...+
T Consensus 99 ~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 99 FIGGGLTA--------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp EECC-TTC--------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred EECCcccH--------HHHHHHHHHhcCCCCEEEEEeec
Confidence 98765432 46899999999999999986533
No 38
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.46 E-value=3.7e-13 Score=121.93 Aligned_cols=106 Identities=21% Similarity=0.380 Sum_probs=85.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCC--C--CC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP--E--GT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~--~--~~ 200 (345)
.+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+++...+ . ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA--GV-AEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TC-GGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 567999999999999999998743 569999999999999999987653 22 2479999999988765431 2 78
Q ss_pred ccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
||+|++|...+ ....+++.+.++|+|||++++..
T Consensus 149 fD~V~~d~~~~-------~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 149 FDLIFIDADKR-------NYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEEECSCGG-------GHHHHHHHHHHTEEEEEEEEEEC
T ss_pred cCEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEeC
Confidence 99999986521 12579999999999999999854
No 39
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.46 E-value=9.7e-14 Score=128.37 Aligned_cols=99 Identities=18% Similarity=0.272 Sum_probs=80.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|..++.++++. .+|++||+++.+++.|++ .++++++.+|+.+.- .++++||+|
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~~--~~~~sfD~v 103 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDTG--LPPASVDVA 103 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCCC--CCSSCEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhhc--ccCCcccEE
Confidence 456799999999999999999884 689999999999987754 358999999987642 347899999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-++.. ...++++++|+|||||+|++...
T Consensus 104 ~~~~~~h~~~-----~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 104 IAAQAMHWFD-----LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EECSCCTTCC-----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEeeehhHhh-----HHHHHHHHHHHcCCCCEEEEEEC
Confidence 9865544432 35799999999999999988653
No 40
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.45 E-value=7.1e-13 Score=116.93 Aligned_cols=104 Identities=19% Similarity=0.160 Sum_probs=86.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+..+|+++|+++.+++.|++++... .-++++++.+|+.+.+.. .++||+|
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~~D~i 112 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF----VARNVTLVEAFAPEGLDD--LPDPDRV 112 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH----TCTTEEEEECCTTTTCTT--SCCCSEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEeCChhhhhhc--CCCCCEE
Confidence 3567999999999999999998866689999999999999999987654 225899999998776553 3679999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+++...+ ....+++.+.++|+|||++++..
T Consensus 113 ~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 113 FIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp EESCCTT-------CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EECCCCc-------CHHHHHHHHHHhcCCCeEEEEEe
Confidence 9886543 13589999999999999999864
No 41
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.45 E-value=1.5e-12 Score=112.79 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=81.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|..+..+++. ..+|++||+++.+++.|++++... ++ ++++++.+|...... ..+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~~~~~l~~-~~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDL--GI--ENTELILDGHENLDH-YVREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHH--TC--CCEEEEESCGGGGGG-TCCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc--CC--CcEEEEeCcHHHHHh-hccCCcCEE
Confidence 45679999999999999999988 579999999999999999988754 22 589999977665432 236789999
Q ss_pred EEcC-CCCCCCc----cccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDS-SDPIGPA----QELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~-~~p~~~~----~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+++. +-+.... ..-....+++.+.++|+|||++++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 9874 2221100 00112467899999999999998754
No 42
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.45 E-value=1.1e-12 Score=120.53 Aligned_cols=126 Identities=17% Similarity=0.151 Sum_probs=93.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|.++..+++..+ .+|++||+++.+++.|++++... ++. .+++++.+|+.++....+.++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~--~~~-~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYN--QLE-DQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHT--TCT-TTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHC--CCc-ccEEEEECcHHHhhhhhccCCccEEE
Confidence 567999999999999999998854 39999999999999999987654 222 47999999999887644468899999
Q ss_pred EcCCCCCC----C-cc-----------ccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHh
Q 019187 206 VDSSDPIG----P-AQ-----------ELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (345)
Q Consensus 206 ~D~~~p~~----~-~~-----------~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~ 260 (345)
+|++.... . .. ......+++.+.++|+|||++++.. .......+.+.+++
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-----~~~~~~~~~~~l~~ 190 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH-----RPERLLDIIDIMRK 190 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE-----CTTTHHHHHHHHHH
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE-----cHHHHHHHHHHHHH
Confidence 98653111 0 00 0112469999999999999999842 22334455566654
No 43
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.44 E-value=3.6e-13 Score=120.66 Aligned_cols=108 Identities=20% Similarity=0.253 Sum_probs=85.1
Q ss_pred CCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCC----CC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE----GT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~----~~ 200 (345)
++++|||||||+|..+..+++. ++..+|++||+++.+++.|++++... ++ ..+++++.+|+.+++..... ++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA--GL-QDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TC-GGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc--CC-CCceEEEECCHHHHHHHHHHhcCCCc
Confidence 5789999999999999999986 33679999999999999999987654 22 24799999999988776522 68
Q ss_pred ccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
||+|++|....... -..++++.+ ++|+|||++++..
T Consensus 135 fD~V~~d~~~~~~~----~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 135 LDMVFLDHWKDRYL----PDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CSEEEECSCGGGHH----HHHHHHHHT-TCCCTTCEEEESC
T ss_pred eEEEEEcCCcccch----HHHHHHHhc-cccCCCeEEEEeC
Confidence 99999986432111 113567777 9999999999864
No 44
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.44 E-value=6.6e-13 Score=118.97 Aligned_cols=107 Identities=20% Similarity=0.381 Sum_probs=86.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCC----C
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE----G 199 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~----~ 199 (345)
..+++|||||||+|..+..+++.. +..+|+++|+++.+++.|++++... ++ ..+++++.+|+.+.+..... +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA--EA-EHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CC-CCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 356899999999999999999863 3679999999999999999987653 22 35899999999887654311 6
Q ss_pred CccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 200 ~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+||+|++|.... ....+++.+.++|+|||++++..
T Consensus 145 ~~D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 145 TFDVAVVDADKE-------NCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp CEEEEEECSCST-------THHHHHHHHHHHEEEEEEEEEEC
T ss_pred CccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEEC
Confidence 899999986521 12578999999999999999853
No 45
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.44 E-value=2.5e-12 Score=116.70 Aligned_cols=148 Identities=9% Similarity=0.014 Sum_probs=101.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~yDvI 204 (345)
.+.+|||||||+|..+..+++..+..+|++||+++.+++.|++++... + -++++++.+|+.++... ...++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL--Q--LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--T--CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--C--CCCEEEEeccHHHhcccccccCCccEE
Confidence 567999999999999999887544678999999999999999987654 2 23699999999886421 014789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh-cCCcceEEEEEEeecCCCcEEE
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGSVNYAWTTVPTYPSGVIGF 283 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~y~~g~w~~ 283 (345)
+++.... ...+++.+.++|+|||++++..+... .+.+..+.+.++.. |. ........+|. ..+.+.+
T Consensus 146 ~~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~g~~~--~~~~~~~~~~l~~~g~~-~~~~~~~~~~~-~~~~~~l 213 (240)
T 1xdz_A 146 TARAVAR--------LSVLSELCLPLVKKNGLFVALKAASA--EEELNAGKKAITTLGGE-LENIHSFKLPI-EESDRNI 213 (240)
T ss_dssp EEECCSC--------HHHHHHHHGGGEEEEEEEEEEECC-C--HHHHHHHHHHHHHTTEE-EEEEEEEECTT-TCCEEEE
T ss_pred EEeccCC--------HHHHHHHHHHhcCCCCEEEEEeCCCc--hHHHHHHHHHHHHcCCe-EeEEEEEecCC-CCCceEE
Confidence 9876321 35899999999999999988643321 23344455555442 31 11111112332 1356777
Q ss_pred EEEecC
Q 019187 284 MLCSTE 289 (345)
Q Consensus 284 ~~ask~ 289 (345)
+++.|.
T Consensus 214 ~~~~k~ 219 (240)
T 1xdz_A 214 MVIRKI 219 (240)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 777765
No 46
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.43 E-value=4.1e-13 Score=126.44 Aligned_cols=104 Identities=14% Similarity=0.256 Sum_probs=83.1
Q ss_pred cCCCCceEEEEeccchHHH-HHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCc
Q 019187 123 SIPNPKKVLVIGGGDGGVL-REVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (345)
Q Consensus 123 ~~~~~~~VL~IG~G~G~~~-~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~y 201 (345)
....+.+|||||||+|+.+ ..+++.+ ..+|+++|+|+++++.|++++... ++ .+++++.+|+.++. +++|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~--gl--~~v~~v~gDa~~l~----d~~F 189 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGL--GV--DGVNVITGDETVID----GLEF 189 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHH--TC--CSEEEEESCGGGGG----GCCC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhc--CC--CCeEEEECchhhCC----CCCc
Confidence 3456889999999988655 5555554 569999999999999999988754 33 58999999998852 5789
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
|+|+++...+ -..++++.+.++|||||+|++...
T Consensus 190 DvV~~~a~~~-------d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAALAE-------PKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECTTCS-------CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CEEEECCCcc-------CHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9999876421 125899999999999999998753
No 47
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.43 E-value=2.7e-13 Score=119.23 Aligned_cols=152 Identities=13% Similarity=0.152 Sum_probs=87.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh--CCCCCcc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA--VPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~~yD 202 (345)
..+.+|||+|||+|..+..+++..+..+++++|+++.+++.|++++... .. +++++.+|+.+.+.. ...++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~-~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF----GA-VVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh----CC-ceEEEEcchHhhhhhhhhccCccc
Confidence 4678999999999999999999865679999999999999999988653 22 789999999886653 1137899
Q ss_pred EEEEcCCCCCCCc-----cccC-----------------cHHHHHHHHhccCCCcE-EEEeccchhhhhhHHHHHHHHHH
Q 019187 203 AVIVDSSDPIGPA-----QELF-----------------EKPFFESVAKALRPGGV-VSTQAESIWLHMHIIEDIVANCR 259 (345)
Q Consensus 203 vIi~D~~~p~~~~-----~~l~-----------------t~ef~~~v~r~LkpgGv-lv~~~~s~~~~~~~~~~i~~~l~ 259 (345)
+|++|.+...... .... -..+++.++++|+|||+ +++... ....+.+..+++.++
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~~ 181 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG--HNQADEVARLFAPWR 181 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT--TSCHHHHHHHTGGGG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC--CccHHHHHHHHHHhh
Confidence 9999765321110 0000 05788899999999999 666432 233333444443233
Q ss_pred hhcCCcceEEEEEEeecCCCcEEEEEEecC
Q 019187 260 QIFKGSVNYAWTTVPTYPSGVIGFMLCSTE 289 (345)
Q Consensus 260 ~~F~~~v~~~~~~vP~y~~g~w~~~~ask~ 289 (345)
.-|. .+ ...+.+. |...++++.+.
T Consensus 182 ~gf~-~~----~~~~~~~-~~~r~~~~~~~ 205 (215)
T 4dzr_A 182 ERGF-RV----RKVKDLR-GIDRVIAVTRE 205 (215)
T ss_dssp GGTE-EC----CEEECTT-SCEEEEEEEEC
T ss_pred cCCc-eE----EEEEecC-CCEEEEEEEEc
Confidence 4452 22 2334443 45567777765
No 48
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.43 E-value=4.7e-13 Score=118.69 Aligned_cols=106 Identities=14% Similarity=0.128 Sum_probs=83.6
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||+|||+|.++.++++.. ..+|++||+|+.+++.|++++... ++ ++++++.+|+.+++... .++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~D~~~~~~~~-~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATL--KA--GNARVVNSNAMSFLAQK-GTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHT--TC--CSEEEECSCHHHHHSSC-CCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHc--CC--CcEEEEECCHHHHHhhc-CCCCCEEE
Confidence 45799999999999999977763 458999999999999999988654 22 58999999999987643 57899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHh--ccCCCcEEEEecc
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAK--ALRPGGVVSTQAE 242 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r--~LkpgGvlv~~~~ 242 (345)
+|.+.... ...++++.+.+ +|+|||++++...
T Consensus 128 ~~~p~~~~-----~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 128 VDPPFRRG-----LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp ECCSSSTT-----THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCCCCC-----cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 98662211 12467777765 5999999998653
No 49
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.42 E-value=1e-12 Score=119.19 Aligned_cols=106 Identities=18% Similarity=0.404 Sum_probs=84.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC--------
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-------- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-------- 196 (345)
.+++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++... ++ ..+++++.+|+.+++...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN--GL-ENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCEEEEECCHHHHHHHHHhhccccc
Confidence 567999999999999999998743 579999999999999999987643 22 246999999998876532
Q ss_pred -----C-C-CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 197 -----P-E-GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 197 -----~-~-~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+ . ++||+|+++...+ . ...+++.+.++|+|||++++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~-----~--~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE-----N--YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG-----G--HHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHH-----H--HHHHHHHHHHHcCCCeEEEEEc
Confidence 1 1 6899999985321 1 2478999999999999999864
No 50
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.41 E-value=1.5e-12 Score=124.77 Aligned_cols=127 Identities=17% Similarity=0.224 Sum_probs=91.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCC--CCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP--EGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~--~~~yDv 203 (345)
++.+|||+|||+|.++..+++.. . +|++||+|+.+++.|++++... ++.+.+++++.+|+.+++.... .++||+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g-a-~V~~VD~s~~al~~a~~n~~~~--gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG-A-EVTHVDASKKAIGWAKENQVLA--GLEQAPIRWICEDAMKFIQREERRGSTYDI 228 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT-C-EEEEECSCHHHHHHHHHHHHHH--TCTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred CCCcEEEcccccCHHHHHHHHcC-C-EEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECcHHHHHHHHHhcCCCceE
Confidence 45799999999999999999873 3 9999999999999999988754 3344469999999999875321 468999
Q ss_pred EEEcCCCC-CCCccccC-----cHHHHHHHHhccCCCcEEEEec-cchhhhhhHHHHHHH
Q 019187 204 VIVDSSDP-IGPAQELF-----EKPFFESVAKALRPGGVVSTQA-ESIWLHMHIIEDIVA 256 (345)
Q Consensus 204 Ii~D~~~p-~~~~~~l~-----t~ef~~~v~r~LkpgGvlv~~~-~s~~~~~~~~~~i~~ 256 (345)
|++|++.- ......++ ..++++.+.++|+|||++++.. .+.....+.+..+++
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~ 288 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMR 288 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHH
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHH
Confidence 99997531 11111011 2578999999999999965544 333334444554444
No 51
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.41 E-value=7.6e-13 Score=123.36 Aligned_cols=144 Identities=13% Similarity=0.079 Sum_probs=102.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
...++|||+|||+|.++..+++... .+|+++|+++.+++.|++++... ++. .+++++.+|+.++.. .++||+|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n--~~~-~~v~~~~~D~~~~~~---~~~fD~V 196 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLN--KVE-DRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHT--TCT-TTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEEECCHHHhcc---cCCccEE
Confidence 3467999999999999999998843 37999999999999999987654 222 469999999988764 5789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch--hhhhhHHHHHHHHHHhhcCCcceE-EEEEEeecCCCcE
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI--WLHMHIIEDIVANCRQIFKGSVNY-AWTTVPTYPSGVI 281 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~--~~~~~~~~~i~~~l~~~F~~~v~~-~~~~vP~y~~g~w 281 (345)
++|.+.. ..++++.+.++|+|||++++...++ ......+..+.+.+++.- -.+.. ....+..|..+.|
T Consensus 197 i~~~p~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G-~~~~~~~~~~v~~~~p~~~ 267 (278)
T 2frn_A 197 LMGYVVR--------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYG-YDVEKLNELKIKRYAPGVW 267 (278)
T ss_dssp EECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTT-CEEEEEEEEEEEEETTTEE
T ss_pred EECCchh--------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcC-CeeEEeeeEEEEecCCCce
Confidence 9986521 2478999999999999999876553 222344455555555432 11211 1223556655666
Q ss_pred EEE
Q 019187 282 GFM 284 (345)
Q Consensus 282 ~~~ 284 (345)
-.+
T Consensus 268 h~~ 270 (278)
T 2frn_A 268 HVV 270 (278)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 52
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.41 E-value=3.5e-12 Score=113.42 Aligned_cols=117 Identities=17% Similarity=0.179 Sum_probs=89.8
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|.++.++++. ..+|++||+++.+++.|++++... ++. .+++++.+|+.+.+.. .+.||+|
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~--g~~-~~v~~~~~d~~~~~~~--~~~~D~v 126 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTY--GLS-PRMRAVQGTAPAALAD--LPLPEAV 126 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT--TCT-TTEEEEESCTTGGGTT--SCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc--CCC-CCEEEEeCchhhhccc--CCCCCEE
Confidence 35679999999999999999988 568999999999999999987654 221 2799999999886653 3579999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~ 261 (345)
+++... ..++++.+.++|+|||++++..... +....+.+.+++.
T Consensus 127 ~~~~~~---------~~~~l~~~~~~LkpgG~lv~~~~~~----~~~~~~~~~l~~~ 170 (204)
T 3njr_A 127 FIGGGG---------SQALYDRLWEWLAPGTRIVANAVTL----ESETLLTQLHARH 170 (204)
T ss_dssp EECSCC---------CHHHHHHHHHHSCTTCEEEEEECSH----HHHHHHHHHHHHH
T ss_pred EECCcc---------cHHHHHHHHHhcCCCcEEEEEecCc----ccHHHHHHHHHhC
Confidence 987522 1238999999999999999875432 3344444555443
No 53
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.40 E-value=4.2e-13 Score=115.52 Aligned_cols=109 Identities=17% Similarity=0.185 Sum_probs=85.8
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+++|||+|||+|..+..+++. +..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+++... .++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~-~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMT--KA-ENRFTLLKMEAERAIDCL-TGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTT--TC-GGGEEEECSCHHHHHHHB-CSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHc--CC-CCceEEEECcHHHhHHhh-cCCCCEE
Confidence 35679999999999999999988 4579999999999999999987653 11 247999999999987654 5679999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHH--hccCCCcEEEEeccc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVA--KALRPGGVVSTQAES 243 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~--r~LkpgGvlv~~~~s 243 (345)
++|.+.. . ....++++.+. ++|+|||++++....
T Consensus 105 ~~~~~~~--~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 105 FLDPPYA--K---ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EECCSSH--H---HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EECCCCC--c---chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 9885421 1 11246777777 999999999987643
No 54
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.40 E-value=1.1e-12 Score=117.65 Aligned_cols=127 Identities=20% Similarity=0.242 Sum_probs=91.1
Q ss_pred CCCceEEEEecc-chHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGG-DGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G-~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
+...+||||||| +|.++..+++.. ..+|+++|+|+.+++.|++++... ..+++++.+|+..+. ..++++||+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~-~~~~~~fD~ 126 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN-----NSNVRLVKSNGGIIK-GVVEGTFDV 126 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT-----TCCCEEEECSSCSST-TTCCSCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh-----CCCcEEEeCCchhhh-hcccCceeE
Confidence 456899999999 999999998874 468999999999999999988754 227999999975332 223588999
Q ss_pred EEEcCCCCCCCc---------------cccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh
Q 019187 204 VIVDSSDPIGPA---------------QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (345)
Q Consensus 204 Ii~D~~~p~~~~---------------~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~ 261 (345)
|+++++...... .......+++.+.++|+|||.+++...+. ......+.+.+++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~~l~~~ 196 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK---EKLLNVIKERGIKL 196 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC---HHHHHHHHHHHHHT
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc---HhHHHHHHHHHHHc
Confidence 998865321110 00012689999999999999998854322 13344555556554
No 55
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.39 E-value=2.7e-13 Score=117.13 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=84.4
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC--CCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~yDv 203 (345)
...+|||+|||+|..+.++++.+ ..+|+++|+|+.+++.|++++... ++ .++++++.+|+.+++... ..++||+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAIT--KE-PEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHH--TC-GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHh--CC-CcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 56799999999999999988863 569999999999999999987654 11 247999999998876432 1578999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHH--HhccCCCcEEEEeccc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESV--AKALRPGGVVSTQAES 243 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v--~r~LkpgGvlv~~~~s 243 (345)
|++|.+.... ...++++.+ .++|+|||++++....
T Consensus 120 i~~~~~~~~~-----~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 120 VLLDPPYAKQ-----EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEECCCGGGC-----CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EEECCCCCch-----hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 9988652111 134667777 8899999999986533
No 56
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.39 E-value=5.5e-12 Score=115.87 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=102.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~yDv 203 (345)
..+.+|||||||+|..+..++...+..+|++||+++.+++.|+++.... ++ .+++++.+|+.++... ...++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~l--~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL--GL--KGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--TC--SSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh--CC--CceEEEECcHHHhhcccccCCCceE
Confidence 3567999999999999999988755679999999999999999987654 22 3599999999887542 11478999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh-cCCcceEEEEEEeecCCCcEE
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGSVNYAWTTVPTYPSGVIG 282 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~y~~g~w~ 282 (345)
|++....+ -..+++.+.+.|+|||.+++..+... .+.+..+.+.++.. | .........+|.. .+...
T Consensus 155 I~s~a~~~--------~~~ll~~~~~~LkpgG~l~~~~g~~~--~~e~~~~~~~l~~~G~-~~~~~~~~~~p~~-~~~R~ 222 (249)
T 3g89_A 155 AVARAVAP--------LCVLSELLLPFLEVGGAAVAMKGPRV--EEELAPLPPALERLGG-RLGEVLALQLPLS-GEARH 222 (249)
T ss_dssp EEEESSCC--------HHHHHHHHGGGEEEEEEEEEEECSCC--HHHHTTHHHHHHHHTE-EEEEEEEEECTTT-CCEEE
T ss_pred EEECCcCC--------HHHHHHHHHHHcCCCeEEEEEeCCCc--HHHHHHHHHHHHHcCC-eEEEEEEeeCCCC-CCcEE
Confidence 99875432 25789999999999999887554321 22333344444432 3 1122222234432 23456
Q ss_pred EEEEecC
Q 019187 283 FMLCSTE 289 (345)
Q Consensus 283 ~~~ask~ 289 (345)
+++..|.
T Consensus 223 l~~~~k~ 229 (249)
T 3g89_A 223 LVVLEKT 229 (249)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 6666664
No 57
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.39 E-value=4.1e-12 Score=112.96 Aligned_cols=111 Identities=18% Similarity=0.186 Sum_probs=83.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC---CCCEEEEEechHhHHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE---DPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~---~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... ++. .++++++.+|+... .. +.++||
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~-~~-~~~~fD 104 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL--RLPRNQWERLQLIQGALTYQ-DK-RFHGYD 104 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC--CCCHHHHTTEEEEECCTTSC-CG-GGCSCS
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh--cCCcccCcceEEEeCCcccc-cc-cCCCcC
Confidence 567999999999999999998766679999999999999999987643 111 13899999997432 21 247899
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
+|++...-...+... ...+++.++++|+|||++++...
T Consensus 105 ~v~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 105 AATVIEVIEHLDLSR--LGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEEEESCGGGCCHHH--HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEeeHHHHHcCCHHH--HHHHHHHHHHHcCCCEEEEEccC
Confidence 999754322212111 15789999999999998887543
No 58
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.38 E-value=1.4e-12 Score=127.35 Aligned_cols=128 Identities=13% Similarity=0.105 Sum_probs=94.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC--CCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~yDv 203 (345)
..++|||+|||+|.++..+++. +..+|++||+++.+++.|++++..+ ++.+.+++++.+|+.+++... ..++||+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n--~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEAN--HLDMANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHT--TCCCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHHhCCCccE
Confidence 5679999999999999999986 3568999999999999999988754 333338999999999987642 1458999
Q ss_pred EEEcCCCCC---CCcccc--CcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHH
Q 019187 204 VIVDSSDPI---GPAQEL--FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVA 256 (345)
Q Consensus 204 Ii~D~~~p~---~~~~~l--~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~ 256 (345)
|++|++... ...... .-.++++.+.+.|+|||++++.+.+.....+.+..+++
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~ 346 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIE 346 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHH
Confidence 999976521 111110 01346777899999999999988766655554444443
No 59
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.38 E-value=1.8e-12 Score=114.35 Aligned_cols=100 Identities=14% Similarity=0.177 Sum_probs=81.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++++... +. .+++++.+|+.++. .++||+|
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~----~~~fD~i 129 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALN--GI--YDIALQKTSLLADV----DGKFDLI 129 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TC--CCCEEEESSTTTTC----CSCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CC--CceEEEeccccccC----CCCceEE
Confidence 356799999999999999988874 569999999999999999987654 22 23999999986642 5789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
+++.... . ...+++.+.++|+|||++++.
T Consensus 130 ~~~~~~~-----~--~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 130 VANILAE-----I--LLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp EEESCHH-----H--HHHHGGGSGGGEEEEEEEEEE
T ss_pred EECCcHH-----H--HHHHHHHHHHhcCCCCEEEEE
Confidence 9875321 1 257889999999999999985
No 60
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.38 E-value=1.3e-12 Score=117.79 Aligned_cols=105 Identities=20% Similarity=0.380 Sum_probs=86.0
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCC-CCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP-EGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~yDvI 204 (345)
.+++|||||||+|..+..+++..+..+|+++|+++.+++.|++++... ++ ..+++++.+|+.+++.... .++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL--GL-ESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--TC-TTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECCHHHHHHhcccCCCccEE
Confidence 567999999999999999998755679999999999999999987653 22 2479999999988655321 4689999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++|...+ ....+++.+.++|+|||++++.
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 9976532 1358999999999999999986
No 61
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.37 E-value=1.1e-11 Score=108.37 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=86.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++... ++ .++++++.+|+.++.... +++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~-~~~fD~ 96 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL--NL-IDRVTLIKDGHQNMDKYI-DCPVKA 96 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT--TC-GGGEEEECSCGGGGGGTC-CSCEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCeEEEECCHHHHhhhc-cCCceE
Confidence 345799999999999999998872 3459999999999999999987653 11 258999999988775433 588999
Q ss_pred EEEcCCC-CCCCcccc----CcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSD-PIGPAQEL----FEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~-p~~~~~~l----~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+++.+. |....... ...++++.+.++|+|||++++..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 9988643 21110000 12469999999999999998764
No 62
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.37 E-value=3.3e-12 Score=116.41 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=89.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccC----CCCCCEEEEEechHhHHhh-CCCCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG----FEDPRVTLHIGDGVAFLKA-VPEGT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~----~~~~rv~v~~~D~~~~l~~-~~~~~ 200 (345)
+..+|||||||+|..+..+++..+..+|++||+++.+++.|++++...... ..-++++++.+|+.+++.. .+.+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 457999999999999999998755568999999999999999876542100 0124799999999886653 24678
Q ss_pred ccEEEEcCCCCCCC----ccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 201 YDAVIVDSSDPIGP----AQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 201 yDvIi~D~~~p~~~----~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
+|.|++..++|+.. ...+...++++.+.++|+|||+|++.+.
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 99999877776532 1233347899999999999999998653
No 63
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.37 E-value=8.6e-12 Score=110.89 Aligned_cols=111 Identities=22% Similarity=0.230 Sum_probs=82.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC---CCCEEEEEechHhHHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE---DPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~---~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.+++|||||||+|..+..+++..+..+|++||+++.+++.|++.+... ++. .++++++.+|+... .. +.++||
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~-~~-~~~~fD 104 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID--RLPEMQRKRISLFQSSLVYR-DK-RFSGYD 104 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG--GSCHHHHTTEEEEECCSSSC-CG-GGTTCS
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh--ccccccCcceEEEeCccccc-cc-ccCCCC
Confidence 567999999999999999998865679999999999999999987643 111 13899999997432 21 257899
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
+|++...-...+... ...+++.++++|+|||+++....
T Consensus 105 ~V~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 105 AATVIEVIEHLDENR--LQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EEEEESCGGGCCHHH--HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEEEHHHHHhCCHHH--HHHHHHHHHHhhCCCEEEEEccc
Confidence 999754322111111 14799999999999998876543
No 64
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.36 E-value=2.5e-12 Score=115.40 Aligned_cols=106 Identities=15% Similarity=0.205 Sum_probs=84.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.|++.+... ++++++.+|+.+... .++||+|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~~---~~~fD~v 113 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKYDF---EEKYDMV 113 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTCCC---CSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhccCC---CCCceEE
Confidence 4568999999999999999998765679999999999999999988643 389999999876532 3789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+.. ...++++.++++|+|||++++..
T Consensus 114 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 114 VSALSIHHLEDE--DKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCccccCCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 986533222111 11358999999999999998854
No 65
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.36 E-value=2.8e-12 Score=112.95 Aligned_cols=102 Identities=12% Similarity=0.042 Sum_probs=83.0
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|..+..+++..+..+++++|+++.+++.|++++... .-++++++.+|+.++. +.++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~---~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL----KLENIEPVQSRVEEFP---SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCSSEEEEECCTTTSC---CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCeEEEecchhhCC---ccCCcCEEE
Confidence 357999999999999999998755679999999999999999987653 2235999999987754 257899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...+ ...+++.+.+.|+|||.+++..+
T Consensus 138 ~~~~~~--------~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 138 SRAFAS--------LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCSSS--------HHHHHHHHTTSEEEEEEEEEEES
T ss_pred EeccCC--------HHHHHHHHHHhcCCCcEEEEEeC
Confidence 764321 25799999999999999998654
No 66
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.36 E-value=1.7e-11 Score=109.88 Aligned_cols=103 Identities=20% Similarity=0.192 Sum_probs=81.4
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH--hhCCCCCc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL--KAVPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l--~~~~~~~y 201 (345)
....+|||+|||+|.++..+++. .+..+|+++|+++.+++.++++... .++++++.+|+.+.. ... .++|
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~------~~~v~~~~~d~~~~~~~~~~-~~~~ 144 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE------RRNIVPILGDATKPEEYRAL-VPKV 144 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS------CTTEEEEECCTTCGGGGTTT-CCCE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc------cCCCEEEEccCCCcchhhcc-cCCc
Confidence 35679999999999999999976 3346999999999999999887653 268999999987632 222 4689
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|+|++|...+.. ...+++.+.+.|+|||.+++.
T Consensus 145 D~v~~~~~~~~~------~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 145 DVIFEDVAQPTQ------AKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEECCCSTTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCHhH------HHHHHHHHHHhcCCCCEEEEE
Confidence 999998763211 235699999999999998875
No 67
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.36 E-value=8.7e-13 Score=112.12 Aligned_cols=104 Identities=14% Similarity=0.089 Sum_probs=82.2
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC--CCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~yDv 203 (345)
..++|||+|||+|..+..++++. .+|+++|+|+.+++.|++++... .- +++++.+|+.+++... ..++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~----~~-~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRT----GL-GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHH----TC-CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHc----CC-ceEEEeccHHHHHHhhhccCCceEE
Confidence 56799999999999999999884 34999999999999999988754 12 7999999998875432 1348999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHH--hccCCCcEEEEecc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVA--KALRPGGVVSTQAE 242 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~--r~LkpgGvlv~~~~ 242 (345)
|+++.+.. .. ..++++.+. ++|+|||++++...
T Consensus 114 i~~~~~~~-~~-----~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 114 AFMAPPYA-MD-----LAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EEECCCTT-SC-----TTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred EEECCCCc-hh-----HHHHHHHHHhhcccCCCcEEEEEeC
Confidence 99986532 11 236677777 99999999998653
No 68
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.35 E-value=1.2e-11 Score=110.52 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=76.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHh--hCCCCCcc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK--AVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~~yD 202 (345)
....+|||||||+|..+..+++..+..+|++||+++.+++.+.+.... ..++.++.+|+..... .. .++||
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~-~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGI-VEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTT-CCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhccc-cccee
Confidence 355799999999999999998874456899999999877655443321 1368888899866421 12 47899
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+++...+. ....+++.++++|||||.+++..
T Consensus 129 ~V~~~~~~~~------~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDIAQKN------QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccChh------HHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999854331 12346899999999999998863
No 69
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.35 E-value=3.1e-12 Score=116.61 Aligned_cols=118 Identities=23% Similarity=0.307 Sum_probs=92.1
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
..+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... ++ ..+++++.+|+.+.+ ++++||+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~---~~~~~D~ 165 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA--GF-DDRVTIKLKDIYEGI---EEENVDH 165 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH--TC-TTTEEEECSCGGGCC---CCCSEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc--CC-CCceEEEECchhhcc---CCCCcCE
Confidence 45679999999999999999987 55679999999999999999987654 22 246999999988653 3578999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~ 261 (345)
|++|.+++ ..+++.+.++|+|||++++...+. +....+.+.+++.
T Consensus 166 v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 166 VILDLPQP---------ERVVEHAAKALKPGGFFVAYTPCS----NQVMRLHEKLREF 210 (255)
T ss_dssp EEECSSCG---------GGGHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHHT
T ss_pred EEECCCCH---------HHHHHHHHHHcCCCCEEEEEECCH----HHHHHHHHHHHHc
Confidence 99987653 367999999999999999865332 2334455555544
No 70
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.35 E-value=4.4e-12 Score=116.59 Aligned_cols=135 Identities=18% Similarity=0.130 Sum_probs=95.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||+|||+|.++..+++.. . +|+++|+|+.+++.|++++... + -. ++++.+|+.+.+. .++||+|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g-~-~v~gvDi~~~~v~~a~~n~~~~--~--~~-v~~~~~d~~~~~~---~~~fD~V 188 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG-G-KALGVDIDPMVLPQAEANAKRN--G--VR-PRFLEGSLEAALP---FGPFDLL 188 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCGGGHHHHHHHHHHT--T--CC-CEEEESCHHHHGG---GCCEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC-C-eEEEEECCHHHHHHHHHHHHHc--C--Cc-EEEEECChhhcCc---CCCCCEE
Confidence 456799999999999999998874 3 9999999999999999987653 1 12 8999999887643 4689999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh-cCCcceEEEEEEeecCCCcEEE
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGSVNYAWTTVPTYPSGVIGF 283 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~y~~g~w~~ 283 (345)
+++.... . ...+++.+.++|+|||++++..... .....+.+.+++. |. . ..+- ..+.|..
T Consensus 189 v~n~~~~-----~--~~~~l~~~~~~LkpgG~lils~~~~----~~~~~v~~~l~~~Gf~-~-----~~~~--~~~~W~~ 249 (254)
T 2nxc_A 189 VANLYAE-----L--HAALAPRYREALVPGGRALLTGILK----DRAPLVREAMAGAGFR-P-----LEEA--AEGEWVL 249 (254)
T ss_dssp EEECCHH-----H--HHHHHHHHHHHEEEEEEEEEEEEEG----GGHHHHHHHHHHTTCE-E-----EEEE--EETTEEE
T ss_pred EECCcHH-----H--HHHHHHHHHHHcCCCCEEEEEeecc----CCHHHHHHHHHHCCCE-E-----EEEe--ccCCeEE
Confidence 9875321 1 2578999999999999999853211 1233455555544 41 1 1122 2356876
Q ss_pred EEEec
Q 019187 284 MLCST 288 (345)
Q Consensus 284 ~~ask 288 (345)
+.+.|
T Consensus 250 l~~~k 254 (254)
T 2nxc_A 250 LAYGR 254 (254)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66543
No 71
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.34 E-value=3.5e-12 Score=112.36 Aligned_cols=105 Identities=16% Similarity=0.235 Sum_probs=83.4
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++. +..+|+++|+++.+++.|++.+... +. .++++++.+|+.+.- .++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~~D~v~ 116 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA--NL-NDRIQIVQGDVHNIP--IEDNYADLIV 116 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECBTTBCS--SCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc--cc-cCceEEEEcCHHHCC--CCcccccEEE
Confidence 4459999999999999999988 4569999999999999999987653 11 358999999987642 2367899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
+...-.... -...+++.++++|+|||.+++.
T Consensus 117 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 117 SRGSVFFWE----DVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECchHhhcc----CHHHHHHHHHHhCCCCCEEEEE
Confidence 865432211 1257999999999999999885
No 72
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.34 E-value=6.7e-12 Score=122.11 Aligned_cols=111 Identities=15% Similarity=0.147 Sum_probs=85.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC-CCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-DPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
...+|||||||+|.++..+++..+..+|++||+|+.+++.|++++... ++. ..+++++.+|+.+.+ +.++||+|
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n--gl~~~~~v~~~~~D~~~~~---~~~~fD~I 296 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN--MPEALDRCEFMINNALSGV---EPFRFNAV 296 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--CGGGGGGEEEEECSTTTTC---CTTCEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc--CCCcCceEEEEechhhccC---CCCCeeEE
Confidence 347999999999999999999866789999999999999999987754 111 236889999987753 35789999
Q ss_pred EEcCCCCCCCc-cccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPA-QELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~-~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++|.+-..+.. ..-...++++.+.++|+|||++++..
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 99876432211 11123478999999999999998854
No 73
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.34 E-value=5e-12 Score=114.25 Aligned_cols=103 Identities=14% Similarity=0.187 Sum_probs=81.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++. ..+|+++|+++.+++.|++. ++++.+|+.+++...++++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 45689999999999999999887 34799999999999999874 67888999888755557899999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
++...-...+... ...+++.++++|+|||++++....
T Consensus 106 ~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 106 MISHFVEHLDPER--LFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEESCGGGSCGGG--HHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCchhhCCcHH--HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9854322222111 258999999999999999987643
No 74
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.33 E-value=1.1e-12 Score=116.36 Aligned_cols=108 Identities=14% Similarity=0.049 Sum_probs=77.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccc-----c---CCCCCCEEEEEechHhHHhhC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVA-----V---GFEDPRVTLHIGDGVAFLKAV 196 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~-----~---~~~~~rv~v~~~D~~~~l~~~ 196 (345)
+.+.+|||+|||+|..+..+++. ..+|++||+++.+++.|++...... + .+..++++++++|+.+.....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 45689999999999999999988 3589999999999999998753200 0 001358999999987653210
Q ss_pred CCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEE
Q 019187 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVV 237 (345)
Q Consensus 197 ~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvl 237 (345)
.++||+|++...-...+... ...+++.++++|||||.+
T Consensus 99 -~~~fD~v~~~~~l~~l~~~~--~~~~l~~~~r~LkpgG~~ 136 (203)
T 1pjz_A 99 -IGHCAAFYDRAAMIALPADM--RERYVQHLEALMPQACSG 136 (203)
T ss_dssp -HHSEEEEEEESCGGGSCHHH--HHHHHHHHHHHSCSEEEE
T ss_pred -CCCEEEEEECcchhhCCHHH--HHHHHHHHHHHcCCCcEE
Confidence 16899999643322111111 246899999999999983
No 75
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.33 E-value=8.7e-12 Score=115.55 Aligned_cols=139 Identities=15% Similarity=0.230 Sum_probs=96.9
Q ss_pred cceEEEEcCeEeeeccch-hHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcc
Q 019187 92 YGKVLILDGVIQLTERDE-CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFF 170 (345)
Q Consensus 92 ~g~~L~lDg~~q~~~~de-~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~ 170 (345)
+|+.+.++..+.+..++. .....++..++ ..+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++
T Consensus 78 ~~~~~~~~~~~~ipr~~te~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~ 153 (276)
T 2b3t_A 78 WSLPLFVSPATLIPRPDTECLVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNA 153 (276)
T ss_dssp TTEEEECCTTSCCCCTTHHHHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHH
T ss_pred CCceEEeCCCCcccCchHHHHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 455566555443433332 22223333322 3467999999999999999997655679999999999999999987
Q ss_pred cccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCC-------------Ccccc--------CcHHHHHHHHh
Q 019187 171 PDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIG-------------PAQEL--------FEKPFFESVAK 229 (345)
Q Consensus 171 ~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~-------------~~~~l--------~t~ef~~~v~r 229 (345)
... .-++++++.+|+.+.+. .++||+|+++.+.... +...+ ....+++.+.+
T Consensus 154 ~~~----~~~~v~~~~~d~~~~~~---~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~ 226 (276)
T 2b3t_A 154 QHL----AIKNIHILQSDWFSALA---GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRN 226 (276)
T ss_dssp HHH----TCCSEEEECCSTTGGGT---TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGG
T ss_pred HHc----CCCceEEEEcchhhhcc---cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHH
Confidence 654 22479999999877643 5689999988643211 10111 12578899999
Q ss_pred ccCCCcEEEEec
Q 019187 230 ALRPGGVVSTQA 241 (345)
Q Consensus 230 ~LkpgGvlv~~~ 241 (345)
.|+|||++++..
T Consensus 227 ~LkpgG~l~~~~ 238 (276)
T 2b3t_A 227 ALVSGGFLLLEH 238 (276)
T ss_dssp GEEEEEEEEEEC
T ss_pred hcCCCCEEEEEE
Confidence 999999999864
No 76
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.33 E-value=4.9e-12 Score=116.47 Aligned_cols=109 Identities=10% Similarity=-0.017 Sum_probs=80.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccc-------c-cCC-----CCCCEEEEEechHhH
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-------A-VGF-----EDPRVTLHIGDGVAF 192 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~-------~-~~~-----~~~rv~v~~~D~~~~ 192 (345)
.+.+|||+|||+|..+..+++. ..+|++||+++.+++.|++..... . .++ ..++++++++|+.+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5679999999999999999988 348999999999999998754310 0 000 236899999998876
Q ss_pred HhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 193 LKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 193 l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
.... .++||+|+....-...+... ...+++.++++|||||++++
T Consensus 146 ~~~~-~~~FD~V~~~~~l~~l~~~~--~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 146 PRAN-IGKFDRIWDRGALVAINPGD--HDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp GGGC-CCCEEEEEESSSTTTSCGGG--HHHHHHHHHHTEEEEEEEEE
T ss_pred Cccc-CCCEEEEEEhhhhhhCCHHH--HHHHHHHHHHHcCCCeEEEE
Confidence 4321 37899999654322222111 25789999999999999864
No 77
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=8.9e-12 Score=115.79 Aligned_cols=144 Identities=12% Similarity=0.023 Sum_probs=102.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
...++|||+|||+|.++..+++..+..+|++||+++.+++.|++++... .-.+++++.+|+.++ .. .++||+|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n----~l~~~~~~~~d~~~~-~~--~~~~D~V 190 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN----KLNNVIPILADNRDV-EL--KDVADRV 190 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT----TCSSEEEEESCGGGC-CC--TTCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCEEEEECChHHc-Cc--cCCceEE
Confidence 4567999999999999999998854569999999999999999988654 224689999999887 42 5789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhh-hhhHHHHHHHHHHhhcCCcceE-EEEEEeecCCCcEE
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWL-HMHIIEDIVANCRQIFKGSVNY-AWTTVPTYPSGVIG 282 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~-~~~~~~~i~~~l~~~F~~~v~~-~~~~vP~y~~g~w~ 282 (345)
++|.+. . ..++++.+.+.|+|||++++.+..... ..+.+.+.++.+.+.+...+.. ....+..|..+.|-
T Consensus 191 i~d~p~--~------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~ 262 (272)
T 3a27_A 191 IMGYVH--K------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVWH 262 (272)
T ss_dssp EECCCS--S------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEEEEEEEEEEEETTEEE
T ss_pred EECCcc--c------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEEeEEEEEEEECCCCCE
Confidence 998753 1 246889999999999999886533211 1134556666666654211221 12345566444443
Q ss_pred E
Q 019187 283 F 283 (345)
Q Consensus 283 ~ 283 (345)
+
T Consensus 263 ~ 263 (272)
T 3a27_A 263 V 263 (272)
T ss_dssp E
T ss_pred E
Confidence 3
No 78
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.32 E-value=2.2e-12 Score=117.48 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=80.1
Q ss_pred CCceEEEEeccchHHHHHHHhc----CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH--HhhCCCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH----SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF--LKAVPEG 199 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~----~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~--l~~~~~~ 199 (345)
++.+|||||||+|..+..+++. .+..+|++||+++.+++.|+.. .++++++.+|+.+. +......
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~---------~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD---------MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG---------CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc---------CCceEEEECcchhHHHHHhhccC
Confidence 4679999999999999999886 4567999999999999888721 25899999999875 3333234
Q ss_pred CccEEEEcCCCCCCCccccCcHHHHHHHHh-ccCCCcEEEEecc
Q 019187 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAK-ALRPGGVVSTQAE 242 (345)
Q Consensus 200 ~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r-~LkpgGvlv~~~~ 242 (345)
+||+|++|.... ....+++.+.+ +|+|||+|++...
T Consensus 152 ~fD~I~~d~~~~-------~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 152 AHPLIFIDNAHA-------NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSSEEEEESSCS-------SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCCEEEECCchH-------hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 799999987621 13578999997 9999999998643
No 79
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.32 E-value=4.4e-12 Score=112.44 Aligned_cols=105 Identities=14% Similarity=0.179 Sum_probs=83.0
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++.. .+|+++|+++.+++.|++++.. .++++++.+|+.++. +.++||+|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~---~~~~fD~v 118 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQFS---TAELFDLI 118 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTCC---CSCCEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhCC---CCCCccEE
Confidence 346799999999999999999883 5899999999999999998764 248999999987764 36889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+... .-..+++.++++|+|||++++..
T Consensus 119 ~~~~~l~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 119 VVAEVLYYLEDMT-QMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEESCGGGSSSHH-HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccHHHhCCCHH-HHHHHHHHHHHHcCCCCEEEEEe
Confidence 9864332222110 01467999999999999999854
No 80
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.32 E-value=1.5e-11 Score=105.95 Aligned_cols=120 Identities=19% Similarity=0.279 Sum_probs=92.0
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++... +. .++++++.+|+.+.+.. .++||+|
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~--~~~~D~v 104 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRH--GL-GDNVTLMEGDAPEALCK--IPDIDIA 104 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHT--TC-CTTEEEEESCHHHHHTT--SCCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHc--CC-CcceEEEecCHHHhccc--CCCCCEE
Confidence 456799999999999999999885 79999999999999999987643 11 25899999998886553 2589999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh-c
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-F 262 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~-F 262 (345)
+++...+ . ...+++.+.++|+|||.+++...+ ......+.+.+++. |
T Consensus 105 ~~~~~~~--~-----~~~~l~~~~~~l~~gG~l~~~~~~----~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 105 VVGGSGG--E-----LQEILRIIKDKLKPGGRIIVTAIL----LETKFEAMECLRDLGF 152 (192)
T ss_dssp EESCCTT--C-----HHHHHHHHHHTEEEEEEEEEEECB----HHHHHHHHHHHHHTTC
T ss_pred EECCchH--H-----HHHHHHHHHHhcCCCcEEEEEecC----cchHHHHHHHHHHCCC
Confidence 9875432 1 268999999999999999986533 23344555555544 5
No 81
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.32 E-value=6.4e-12 Score=116.46 Aligned_cols=108 Identities=19% Similarity=0.315 Sum_probs=85.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|.++..+++. ..+|++||+++.+++.|++.+... ++ .++++++.+|+.+.... .+++||+|
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~-~~~~fD~v 140 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAK--GV-SDNMQFIHCAAQDVASH-LETPVDLI 140 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC---CC-GGGEEEEESCGGGTGGG-CSSCEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhc--CC-CcceEEEEcCHHHhhhh-cCCCceEE
Confidence 34679999999999999999988 458999999999999999987643 11 25899999998876532 36899999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-...+. ...+++.++++|+|||++++...
T Consensus 141 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 141 LFHAVLEWVAD----PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhcccC----HHHHHHHHHHHcCCCeEEEEEEe
Confidence 98644322211 25799999999999999998653
No 82
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.32 E-value=1e-11 Score=116.30 Aligned_cols=109 Identities=15% Similarity=0.086 Sum_probs=84.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+ .+|+++|+++.+++.|++.+... ++ ..+++++.+|+.++ +++||+|
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-----~~~fD~v 141 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEV--DS-PRRKEVRIQGWEEF-----DEPVDRI 141 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHS--CC-SSCEEEEECCGGGC-----CCCCSEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEECCHHHc-----CCCccEE
Confidence 3557999999999999999998744 68999999999999999987653 22 24899999998765 5789999
Q ss_pred EEcCCCCCCCc-----cccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPA-----QELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~-----~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-...+. ..-....+++.+.++|+|||+++++..
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 98543211110 001125899999999999999998763
No 83
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.31 E-value=5.9e-12 Score=115.59 Aligned_cols=107 Identities=16% Similarity=0.122 Sum_probs=85.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++. +..+|++||+++.+++.|++.+... ++ .++++++.+|+.++. .+.++||+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~--~~~~~fD~i 118 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS--GL-QNRVTGIVGSMDDLP--FRNEELDLI 118 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC--CCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc--CC-CcCcEEEEcChhhCC--CCCCCEEEE
Confidence 45689999999999999999998 4569999999999999999987653 22 357999999986642 236789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-... -...+++.++++|+|||++++...
T Consensus 119 ~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 119 WSEGAIYNI-----GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp EESSCGGGT-----CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEcCCceec-----CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 976443211 136899999999999999998753
No 84
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.31 E-value=6.6e-12 Score=110.94 Aligned_cols=100 Identities=23% Similarity=0.303 Sum_probs=81.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++. ..+|+++|+++.+++.|++++... .-++++++.+|+.+.... .++||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~~D~i 147 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNL----DLHNVSTRHGDGWQGWQA--RAPFDAI 147 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc----CCCceEEEECCcccCCcc--CCCccEE
Confidence 45679999999999999999988 479999999999999999988754 234799999998876543 5789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
+++...+..+ +.+.+.|+|||++++...
T Consensus 148 ~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 148 IVTAAPPEIP----------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp EESSBCSSCC----------THHHHTEEEEEEEEEEEC
T ss_pred EEccchhhhh----------HHHHHhcccCcEEEEEEc
Confidence 9986544322 257899999999998653
No 85
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.31 E-value=1e-11 Score=112.86 Aligned_cols=105 Identities=17% Similarity=0.135 Sum_probs=84.0
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++.+. .++++++.+|+.+.- .+.++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDIA--IEPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGCC--CCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhCC--CCCCCeEEEE
Confidence 56899999999999999999884 3489999999999999999864 358999999987642 2368899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
+...-.... . ...+++.++++|+|||++++...++
T Consensus 114 ~~~~l~~~~--~--~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 114 SSLALHYIA--S--FDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp EESCGGGCS--C--HHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred Echhhhhhh--h--HHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 865322111 1 2689999999999999999975443
No 86
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.31 E-value=6.5e-12 Score=114.15 Aligned_cols=106 Identities=14% Similarity=0.089 Sum_probs=84.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|..+..+++..+. +|+++|+++.+++.|++++... ++ ..+++++.+|+.++. .++++||+|
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~fD~v 118 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKA--NC-ADRVKGITGSMDNLP--FQNEELDLI 118 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHc--CC-CCceEEEECChhhCC--CCCCCEEEE
Confidence 34579999999999999999998543 9999999999999999987653 22 247999999986542 236889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-.... ...+++.++++|+|||++++..
T Consensus 119 ~~~~~l~~~~-----~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 119 WSEGAIYNIG-----FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEESCSCCCC-----HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EecChHhhcC-----HHHHHHHHHHHcCCCcEEEEEE
Confidence 9865433221 3689999999999999999865
No 87
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.31 E-value=6.1e-12 Score=114.95 Aligned_cols=104 Identities=16% Similarity=0.274 Sum_probs=82.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+... ..++++++.+|+.+.- .++++||+|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~----~~~~v~~~~~d~~~l~--~~~~~fD~V 107 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGN----GHQQVEYVQGDAEQMP--FTDERFHIV 107 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCC-CCC--SCTTCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEecHHhCC--CCCCCEEEE
Confidence 356799999999999999999884 49999999999999999987543 2357999999987642 236789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++...-...+. ...+++.++++|+|||.+++.
T Consensus 108 ~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 108 TCRIAAHHFPN----PASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEEE
Confidence 98644322221 258999999999999999885
No 88
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.31 E-value=3.8e-12 Score=117.17 Aligned_cols=107 Identities=17% Similarity=0.217 Sum_probs=86.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++..+..+|+++|+++.+++.|++.+... .-++++++.+|+.+.. .+.++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~~~~~fD~v 109 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN----GIKNVKFLQANIFSLP--FEDSSFDHI 109 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCGGGCC--SCTTCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEcccccCC--CCCCCeeEE
Confidence 4567999999999999999998865679999999999999999987653 2357999999987653 236889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+. ...+++.++++|+|||++++..
T Consensus 110 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 110 FVCFVLEHLQS----PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEechhhhcCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 98654322221 2479999999999999998864
No 89
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.31 E-value=2.6e-12 Score=116.25 Aligned_cols=107 Identities=15% Similarity=0.214 Sum_probs=83.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++... ...+++++.+|+.++.. +.++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~~--~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEE----GKRVRNYFCCGLQDFTP--EPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGG----GGGEEEEEECCGGGCCC--CSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhc----CCceEEEEEcChhhcCC--CCCCEEEEE
Confidence 46899999999999999988875 568999999999999999988653 13478999999766532 256899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++..-...+... ...+++.++++|+|||++++..
T Consensus 152 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 152 IQWVIGHLTDQH--LAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhhCCHHH--HHHHHHHHHHhcCCCeEEEEEE
Confidence 875432222111 1478999999999999998854
No 90
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=5.3e-12 Score=112.31 Aligned_cols=105 Identities=20% Similarity=0.242 Sum_probs=82.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++..+ +|+++|+++.+++.|++++... .++++++.+|+.+.. .+.++||+|+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~~~D~v~ 108 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKLS--FEDKTFDYVI 108 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSCC--SCTTCEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcCC--CCCCcEEEEE
Confidence 468999999999999999988843 8999999999999999987643 268999999977642 2357899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+...-....... ...+++.++++|+|||++++..
T Consensus 109 ~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 109 FIDSIVHFEPLE--LNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp EESCGGGCCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCchHhCCHHH--HHHHHHHHHHHcCCCcEEEEEe
Confidence 864411222111 2578999999999999998864
No 91
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=5.5e-11 Score=101.67 Aligned_cols=114 Identities=12% Similarity=0.176 Sum_probs=88.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++ +..+++++|+++.+++.|++++... .-++++++.+|+.+.+. .++||+|
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~~---~~~~D~i 104 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKF----NIKNCQIIKGRAEDVLD---KLEFNKA 104 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHT----TCCSEEEEESCHHHHGG---GCCCSEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHc----CCCcEEEEECCcccccc---CCCCcEE
Confidence 3567999999999999999998 3679999999999999999987654 22579999999988544 4689999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~ 261 (345)
+++.. . ....+++.++++ |||.+++.... ...+..+.+.+++.
T Consensus 105 ~~~~~---~-----~~~~~l~~~~~~--~gG~l~~~~~~----~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 105 FIGGT---K-----NIEKIIEILDKK--KINHIVANTIV----LENAAKIINEFESR 147 (183)
T ss_dssp EECSC---S-----CHHHHHHHHHHT--TCCEEEEEESC----HHHHHHHHHHHHHT
T ss_pred EECCc---c-----cHHHHHHHHhhC--CCCEEEEEecc----cccHHHHHHHHHHc
Confidence 98765 1 135789999888 99999986533 23344555555554
No 92
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.30 E-value=1.4e-11 Score=120.54 Aligned_cols=124 Identities=18% Similarity=0.239 Sum_probs=92.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
..++|||+|||+|+.+..+++. +. +|++||+|+.+++.|++++..+ ++. .++.++|+.+++... .+.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~-ga-~V~avDis~~al~~a~~n~~~n--g~~---~~~~~~D~~~~l~~~-~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK-GA-YALAVDKDLEALGVLDQAALRL--GLR---VDIRHGEALPTLRGL-EGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHH--TCC---CEEEESCHHHHHHTC-CCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHh--CCC---CcEEEccHHHHHHHh-cCCCCEEE
Confidence 3679999999999999999987 33 4999999999999999998764 222 356699999998765 44599999
Q ss_pred EcCCCCCCCccccC-----cHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHH
Q 019187 206 VDSSDPIGPAQELF-----EKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVAN 257 (345)
Q Consensus 206 ~D~~~p~~~~~~l~-----t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~ 257 (345)
+|++.-......+. ..++++.+.++|+|||++++.+.+.....+.+...+..
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~ 342 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARR 342 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 99764221111111 14788889999999999998776666555555544443
No 93
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.29 E-value=3.2e-12 Score=119.71 Aligned_cols=116 Identities=18% Similarity=0.190 Sum_probs=82.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccC-----------------------------
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG----------------------------- 176 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~----------------------------- 176 (345)
.+++|||||||+|..+..+++..+..+|++||+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 468999999999999999999865679999999999999999986543100
Q ss_pred -----------C--------------CCCCEEEEEechHhHH---hhCCCCCccEEEEcCCCCCCC-c-cccCcHHHHHH
Q 019187 177 -----------F--------------EDPRVTLHIGDGVAFL---KAVPEGTYDAVIVDSSDPIGP-A-QELFEKPFFES 226 (345)
Q Consensus 177 -----------~--------------~~~rv~v~~~D~~~~l---~~~~~~~yDvIi~D~~~p~~~-~-~~l~t~ef~~~ 226 (345)
+ -..+++++.+|..... .....++||+|++.....+.. . ..--...+++.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0 0148999999976321 122368899999865421110 0 00012578999
Q ss_pred HHhccCCCcEEEEec
Q 019187 227 VAKALRPGGVVSTQA 241 (345)
Q Consensus 227 v~r~LkpgGvlv~~~ 241 (345)
++++|+|||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999964
No 94
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.29 E-value=1.1e-11 Score=111.80 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=81.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHh--hCCCCCcc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK--AVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~~yD 202 (345)
....+|||||||+|.++..+++..+..+|++||+++.+++.++++... .++++++.+|+..... .. .++||
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~-~~~~D 145 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANI-VEKVD 145 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTT-SCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCccccccc-CccEE
Confidence 356799999999999999999884457999999999999999988653 2689999999876221 12 36899
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
+|+.|..++.. ...+++.+.+.|+|||.+++.
T Consensus 146 ~v~~~~~~~~~------~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQPNQ------AEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCCSTTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCChhH------HHHHHHHHHHhCCCCcEEEEE
Confidence 99977644311 256799999999999999884
No 95
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.29 E-value=1.2e-11 Score=109.65 Aligned_cols=113 Identities=16% Similarity=0.212 Sum_probs=85.7
Q ss_pred HHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH
Q 019187 111 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV 190 (345)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~ 190 (345)
.|.+++..+.. ..+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++.++ .+++++.+|+.
T Consensus 33 ~~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~ 99 (220)
T 3hnr_A 33 HYEDILEDVVN---KSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFL 99 (220)
T ss_dssp THHHHHHHHHH---TCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSS
T ss_pred HHHHHHHHhhc---cCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChh
Confidence 34556655433 25679999999999999999988 4589999999999999999764 47889999987
Q ss_pred hHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 191 AFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 191 ~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++. . .++||+|++...-...+... ...+++.++++|+|||.+++..
T Consensus 100 ~~~--~-~~~fD~v~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 100 SFE--V-PTSIDTIVSTYAFHHLTDDE--KNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp SCC--C-CSCCSEEEEESCGGGSCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcC--C-CCCeEEEEECcchhcCChHH--HHHHHHHHHHhcCCCCEEEEEe
Confidence 652 2 27899999864432222111 1348999999999999999874
No 96
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.29 E-value=7.6e-12 Score=113.82 Aligned_cols=106 Identities=18% Similarity=0.245 Sum_probs=83.8
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++.. ..+|++||+++.+++.|++.+... ++++++.+|+.+. ..+.++||+|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~--~~~~~~fD~v 124 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTK--EFPENNFDLI 124 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTC--CCCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccC--CCCCCcEEEE
Confidence 356799999999999999999864 468999999999999999987541 6899999998765 2236889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+... ...+++.++++|+|||.+++..
T Consensus 125 ~~~~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 125 YSRDAILALSLEN--KNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred eHHHHHHhcChHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 9854332221111 2578999999999999998865
No 97
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.29 E-value=1.4e-11 Score=114.60 Aligned_cols=107 Identities=12% Similarity=0.136 Sum_probs=85.8
Q ss_pred CCCceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++.+... ..+++++++|+.++.. .++||+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~---~~~fD~ 92 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIEL---NDKYDI 92 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCCC---SSCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcCc---CCCeeE
Confidence 4678999999999999999988744 479999999999999999987653 3489999999887532 468999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
|++...-...+. ...+++.++++|+|||.+++...+
T Consensus 93 v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 93 AICHAFLLHMTT----PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEESCGGGCSS----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECChhhcCCC----HHHHHHHHHHHcCCCCEEEEEecc
Confidence 998654322211 258999999999999999986544
No 98
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.28 E-value=9.1e-12 Score=108.38 Aligned_cols=104 Identities=14% Similarity=0.165 Sum_probs=81.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++.+... ..++++++.+|+.+.. . .++||+|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~-~~~~D~v~ 102 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIE----NLDNLHTRVVDLNNLT--F-DRQYDFIL 102 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECCGGGCC--C-CCCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhC----CCCCcEEEEcchhhCC--C-CCCceEEE
Confidence 5679999999999999999988 358999999999999999987643 2246999999987642 2 57899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
+...-...+... ...+++.+.++|+|||.+++.
T Consensus 103 ~~~~l~~~~~~~--~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 103 STVVLMFLEAKT--IPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp EESCGGGSCGGG--HHHHHHHHHHTEEEEEEEEEE
T ss_pred EcchhhhCCHHH--HHHHHHHHHHhcCCCeEEEEE
Confidence 865432222111 367999999999999997664
No 99
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.28 E-value=9.4e-12 Score=116.35 Aligned_cols=109 Identities=14% Similarity=0.103 Sum_probs=84.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC----CCC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV----PEG 199 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~----~~~ 199 (345)
..+.+|||||||+|..+..+++.. +..+|++||+++.+++.|++.+... ....++++++.+|+.++.... ..+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS--PDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC--C-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc--cCCCCceEEEEcCHHhCCccccccccCC
Confidence 357899999999999999999752 5689999999999999999986542 012468999999987753211 127
Q ss_pred CccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 200 ~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
+||+|++...-+.. --..+++.++++|+|||.+++.
T Consensus 113 ~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 113 KIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp CEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEEE
Confidence 89999986543222 2368999999999999999873
No 100
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.28 E-value=2.5e-11 Score=107.26 Aligned_cols=100 Identities=18% Similarity=0.166 Sum_probs=78.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++.+ +++++.+|+.... ..++||+|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~---~~~~fD~v 106 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD---AIDAYDAV 106 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC---CCSCEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC---CCCcEEEE
Confidence 35679999999999999999988 358999999999999999875 3456778876653 37889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+... ...+++.++++|+|||++++..
T Consensus 107 ~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 107 WAHACLLHVPRDE--LADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp EECSCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecCchhhcCHHH--HHHHHHHHHHhcCCCcEEEEEE
Confidence 9764332221111 2578999999999999998864
No 101
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.28 E-value=3.3e-11 Score=112.59 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=84.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
...++|||+|||+|.++..++++. ..+|+++|+||..++.++++...+ ++. .+++++.+|++++.. .+.||.|
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N--~v~-~~v~~~~~D~~~~~~---~~~~D~V 196 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLN--KVE-DRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHT--TCT-TTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHc--CCC-CcEEEEeCcHHHhcc---ccCCCEE
Confidence 456899999999999999999884 468999999999999999998765 333 489999999998864 5789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+++.+.. +.+|+..+.++|++||++.+..
T Consensus 197 i~~~p~~--------~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 197 LMGYVVR--------THEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EECCCSS--------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCc--------HHHHHHHHHHHcCCCCEEEEEe
Confidence 9886521 3478899999999999986643
No 102
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.28 E-value=1.1e-11 Score=120.64 Aligned_cols=124 Identities=14% Similarity=0.167 Sum_probs=94.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC--CCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~yDv 203 (345)
..++|||+|||+|..+..+++. ..+|++||+++.+++.|++++..+ ++ .+++++.+|+.+++... ..++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n--~~--~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLN--GL--GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHT--TC--TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc--CC--CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5679999999999999999988 578999999999999999988754 22 34999999999987642 1468999
Q ss_pred EEEcCCCCCCCcccc-----CcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHH
Q 019187 204 VIVDSSDPIGPAQEL-----FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIV 255 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l-----~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~ 255 (345)
|++|++........+ ...++++.+.+.|+|||++++.+.+.....+.+...+
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i 339 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMV 339 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHH
Confidence 999976422111111 1246889999999999999998776665555444443
No 103
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.27 E-value=1e-11 Score=111.50 Aligned_cols=100 Identities=14% Similarity=0.155 Sum_probs=80.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++.. .+|+++|+++.+++.|++.++. +++++.+|+.+.. ++++||+|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~--------~v~~~~~d~~~~~---~~~~fD~v~ 108 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLKD--------GITYIHSRFEDAQ---LPRRYDNIV 108 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSCS--------CEEEEESCGGGCC---CSSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhhC--------CeEEEEccHHHcC---cCCcccEEE
Confidence 56799999999999999998874 3799999999999999998641 7999999987762 368899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHH-hccCCCcEEEEecc
Q 019187 206 VDSSDPIGPAQELFEKPFFESVA-KALRPGGVVSTQAE 242 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~-r~LkpgGvlv~~~~ 242 (345)
+...-...+. ...+++.++ ++|+|||.+++...
T Consensus 109 ~~~~l~~~~~----~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 109 LTHVLEHIDD----PVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EESCGGGCSS----HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EhhHHHhhcC----HHHHHHHHHHHhcCCCCEEEEEcC
Confidence 7543221111 257999999 99999999998663
No 104
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.27 E-value=9.3e-12 Score=118.69 Aligned_cols=123 Identities=20% Similarity=0.225 Sum_probs=88.6
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccc-----cCC--CCCCEEEEEechHhHHhhC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVA-----VGF--EDPRVTLHIGDGVAFLKAV 196 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~-----~~~--~~~rv~v~~~D~~~~l~~~ 196 (345)
....+|||||||+|.++..+++. .+..+|+++|+++.+++.|++++.... ..+ ...+++++.+|+.+.+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 35679999999999999999986 444799999999999999999876421 011 1258999999988765333
Q ss_pred CCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHh
Q 019187 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (345)
Q Consensus 197 ~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~ 260 (345)
++++||+|++|..++. .+++.+.++|+|||++++...+ ......+++.+++
T Consensus 184 ~~~~fD~V~~~~~~~~---------~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~ 234 (336)
T 2b25_A 184 KSLTFDAVALDMLNPH---------VTLPVFYPHLKHGGVCAVYVVN----ITQVIELLDGIRT 234 (336)
T ss_dssp ----EEEEEECSSSTT---------TTHHHHGGGEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCHH---------HHHHHHHHhcCCCcEEEEEeCC----HHHHHHHHHHHHh
Confidence 3567999999876543 3689999999999999986532 2334455555554
No 105
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.27 E-value=1.3e-11 Score=108.35 Aligned_cols=100 Identities=18% Similarity=0.157 Sum_probs=80.3
Q ss_pred CceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
+.+|||||||+|..+..+++. ..+|++||+++.+++.|++.+ ++++++.+|+.++- .+.++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH---------PSVTFHHGTITDLS--DSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGGG--GSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC---------CCCeEEeCcccccc--cCCCCeEEEEe
Confidence 679999999999999999988 348999999999999999874 36899999987753 23689999998
Q ss_pred cCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 207 D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
...-...+... ...+++.++++|+|||.+++..
T Consensus 109 ~~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 109 WYSLIHMGPGE--LPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp ESSSTTCCTTT--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhHhcCCHHH--HHHHHHHHHHHcCCCcEEEEEE
Confidence 54432222111 3689999999999999998865
No 106
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.26 E-value=1.3e-11 Score=109.01 Aligned_cols=103 Identities=22% Similarity=0.282 Sum_probs=81.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|..+..+++. ..+|+++|+++.+++.+++. ..++++++.+|+.++ .+.++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~---~~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDW---TPDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSC---CCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccC---CCCCceeEE
Confidence 34579999999999999999988 45999999999999999981 225799999998776 236899999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-...+... ...+++.++++|+|||++++...
T Consensus 112 ~~~~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 112 FFAHWLAHVPDDR--FEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEechhhcCCHHH--HHHHHHHHHHHcCCCeEEEEEeC
Confidence 9865332222110 15789999999999999988653
No 107
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.26 E-value=2.3e-11 Score=118.84 Aligned_cols=128 Identities=16% Similarity=0.183 Sum_probs=95.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC--CCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~yDv 203 (345)
..++|||+|||+|+++..+++.. ..+|++||+++.+++.|++++..+ ++.+++++++.+|+.+++... ..++||+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 56799999999999999999874 569999999999999999998754 221227999999999987642 1468999
Q ss_pred EEEcCCCCCCCcccc-----CcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHH
Q 019187 204 VIVDSSDPIGPAQEL-----FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVA 256 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l-----~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~ 256 (345)
|++|++........+ ...+++..+.+.|+|||++++.+.+.....+.+..++.
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~ 354 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIA 354 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHH
Confidence 999976421111010 12578889999999999999987665555444444443
No 108
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.26 E-value=1e-11 Score=115.10 Aligned_cols=104 Identities=20% Similarity=0.325 Sum_probs=84.2
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++... ...++++++.+|+.+.+ ++++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~g~~~v~~~~~d~~~~~---~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEF---YDIGNVRTSRSDIADFI---SDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTT---SCCTTEEEECSCTTTCC---CSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhc---CCCCcEEEEECchhccC---cCCCccE
Confidence 34679999999999999999886 45679999999999999999987532 01357999999987743 2578999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
|++|.+++ ..+++.+.++|+|||++++...+
T Consensus 183 Vi~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 183 VIADIPDP---------WNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp EEECCSCG---------GGSHHHHHHTEEEEEEEEEEESS
T ss_pred EEEcCcCH---------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 99976543 36799999999999999986533
No 109
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.26 E-value=2.3e-11 Score=109.90 Aligned_cols=101 Identities=24% Similarity=0.301 Sum_probs=82.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++... ++ +++++++.+|..+... +.+.||+|+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~--~~~~~D~v~ 163 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKF--NL-GKNVKFFNVDFKDAEV--PEGIFHAAF 163 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHT--TC-CTTEEEECSCTTTSCC--CTTCBSEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc--CC-CCcEEEEEcChhhccc--CCCcccEEE
Confidence 4579999999999999999988 569999999999999999987543 22 2589999999877541 246799999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++..++ ..+++.+.++|+|||.+++...
T Consensus 164 ~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 164 VDVREP---------WHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ECSSCG---------GGGHHHHHHHBCTTCEEEEEES
T ss_pred ECCcCH---------HHHHHHHHHHcCCCCEEEEEeC
Confidence 876532 3678999999999999998653
No 110
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.26 E-value=1.3e-11 Score=120.24 Aligned_cols=109 Identities=21% Similarity=0.229 Sum_probs=86.4
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|.++..+++. ..+|++||+|+.+++.|++++... ..+++++.+|+.+.... .++||+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~-----~~~v~~~~~D~~~~~~~--~~~fD~Ii 303 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEAN-----ALKAQALHSDVDEALTE--EARFDIIV 303 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTSCT--TCCEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc-----CCCeEEEEcchhhcccc--CCCeEEEE
Confidence 4679999999999999999988 359999999999999999988753 23489999998877542 47899999
Q ss_pred EcCCCCCCCcc-ccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 206 VDSSDPIGPAQ-ELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 206 ~D~~~p~~~~~-~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
++.+-..+... .-....+++.++++|+|||++++.+..
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 98765432211 111357999999999999999986543
No 111
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.26 E-value=2.1e-11 Score=119.13 Aligned_cols=126 Identities=14% Similarity=0.204 Sum_probs=95.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC--CCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~yDv 203 (345)
..++|||+|||+|..+..+++. +..+|++||+++.+++.|++++... ++. ++++++.+|+.+++... ..++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n--~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLN--GVE-DRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT--TCG-GGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc--CCC-ccceEEECCHHHHHHHHHhhCCCCCE
Confidence 5679999999999999999987 4569999999999999999998754 222 28999999999887532 2468999
Q ss_pred EEEcCCCCCCCcccc-----CcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHH
Q 019187 204 VIVDSSDPIGPAQEL-----FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIV 255 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l-----~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~ 255 (345)
|++|++........+ ...+++..+.+.|+|||++++.+.+.....+.+..++
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v 349 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMI 349 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHH
Confidence 999976422111111 1246889999999999999887766655555444444
No 112
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.25 E-value=1.3e-11 Score=111.60 Aligned_cols=105 Identities=18% Similarity=0.229 Sum_probs=82.8
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+... .-++++++.+|+.+.. .++++||+|
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~--~~~~~fD~v 91 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEK----GVENVRFQQGTAESLP--FPDDSFDII 91 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHH----TCCSEEEEECBTTBCC--SCTTCEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc----CCCCeEEEecccccCC--CCCCcEEEE
Confidence 456899999999999999998874 48999999999999999987643 2247999999986642 235789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.......+. ...+++.++++|+|||.+++..
T Consensus 92 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 92 TCRYAAHHFSD----VRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhccC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 98643322111 2578999999999999998853
No 113
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.25 E-value=9.3e-12 Score=112.00 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=82.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++. ..+|+++|+++.+++.|++.+.... ...+++++.+|+.++. +.++||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR---PTELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC---CSSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC---CCCCeeEEE
Confidence 3469999999999999998774 4689999999999999999876420 1257999999987753 256899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+...-...+... ...+++.++++|+|||.+++..
T Consensus 138 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 138 DYVFFCAIEPEM--RPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp EESSTTTSCGGG--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EChhhhcCCHHH--HHHHHHHHHHHCCCCcEEEEEE
Confidence 754433222111 3589999999999999998754
No 114
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.25 E-value=5.3e-12 Score=111.97 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=84.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||||||+|..+..+++.. +..+|+++|+++.+++.|++.+... ..++++++.+|+.++. .++++||+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~~~~~fD~ 109 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL----GLKNVEVLKSEENKIP--LPDNTVDF 109 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECBTTBCS--SCSSCEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc----CCCcEEEEecccccCC--CCCCCeeE
Confidence 356799999999999999998873 4569999999999999999987654 2247999999987642 23678999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|++...-.... -...+++.++++|+|||++++..
T Consensus 110 v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 110 IFMAFTFHELS----EPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEEESCGGGCS----SHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeehhhhhcC----CHHHHHHHHHHHhCCCeEEEEEE
Confidence 99864432211 12589999999999999998854
No 115
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.25 E-value=1.3e-11 Score=112.18 Aligned_cols=102 Identities=16% Similarity=0.212 Sum_probs=82.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.+++.. ++++++.+|+.++. ++++||+|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~---~~~~fD~v 99 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATWK---PAQKADLL 99 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTCC---CSSCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhcC---ccCCcCEE
Confidence 3567999999999999999988744568999999999999999872 36899999987753 36789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-...+. ...+++.++++|+|||.+++...
T Consensus 100 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 100 YANAVFQWVPD----HLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEESCGGGSTT----HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEeCchhhCCC----HHHHHHHHHHhcCCCeEEEEEeC
Confidence 98654332211 25789999999999999998763
No 116
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.25 E-value=1.1e-11 Score=112.54 Aligned_cols=106 Identities=18% Similarity=0.245 Sum_probs=82.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+... ++ .++++++.+|+.+... +++||+|
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~---~~~fD~V 107 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEEL--GV-SERVHFIHNDAAGYVA---NEKCDVA 107 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCCTTCCC---SSCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc--CC-CcceEEEECChHhCCc---CCCCCEE
Confidence 456799999999999999999875 358999999999999999987643 22 2489999999876532 5789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.......+ . ...+++.++++|||||.+++..
T Consensus 108 ~~~~~~~~~~--~--~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 108 ACVGATWIAG--G--FAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEESCGGGTS--S--SHHHHHHHTTSEEEEEEEEEEE
T ss_pred EECCChHhcC--C--HHHHHHHHHHHcCCCeEEEEec
Confidence 9733221111 1 2688999999999999998854
No 117
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.25 E-value=1.5e-11 Score=113.95 Aligned_cols=104 Identities=14% Similarity=0.081 Sum_probs=82.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++. ..+|++||+++.+++.|++.+... ..+++++.+|+.+... .++||+|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~---~~~fD~i~ 189 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKE-----NLNISTALYDINAANI---QENYDFIV 189 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCGGGCCC---CSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHc-----CCceEEEEeccccccc---cCCccEEE
Confidence 5679999999999999999988 348999999999999999987653 2289999999876532 67899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+...-....... ...+++.++++|+|||++++..
T Consensus 190 ~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 190 STVVFMFLNRER--VPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp ECSSGGGSCGGG--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EccchhhCCHHH--HHHHHHHHHHhcCCCcEEEEEE
Confidence 865432222111 3579999999999999977643
No 118
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.25 E-value=4.3e-11 Score=112.00 Aligned_cols=140 Identities=14% Similarity=0.229 Sum_probs=96.6
Q ss_pred CcceEEEEcCeEeeeccchhHH-HHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhc
Q 019187 91 TYGKVLILDGVIQLTERDECAY-QEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQF 169 (345)
Q Consensus 91 ~~g~~L~lDg~~q~~~~de~~Y-~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~ 169 (345)
.+|..+.++..+.+..++.... ..++.++.. ....+|||||||+|.++..+++. +..+|++||+++.+++.|+++
T Consensus 90 f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~---~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n 165 (284)
T 1nv8_A 90 FMGLSFLVEEGVFVPRPETEELVELALELIRK---YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKN 165 (284)
T ss_dssp ETTEEEECCTTSCCCCTTHHHHHHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHH
T ss_pred ECCeEEEeCCCceecChhHHHHHHHHHHHhcc---cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHH
Confidence 3566666665444444332222 223333221 14469999999999999999988 678999999999999999998
Q ss_pred ccccccCCCCCCEEEEEechHhHHhhCCCCCc---cEEEEcCCCCC-----------CCccccC----cHHHHHHHH-hc
Q 019187 170 FPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY---DAVIVDSSDPI-----------GPAQELF----EKPFFESVA-KA 230 (345)
Q Consensus 170 ~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~y---DvIi~D~~~p~-----------~~~~~l~----t~ef~~~v~-r~ 230 (345)
+... ++ ..+++++.+|+.+.+. ++| |+|+++++... .+...++ ..++|+.+. +.
T Consensus 166 ~~~~--~l-~~~v~~~~~D~~~~~~----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~ 238 (284)
T 1nv8_A 166 AERH--GV-SDRFFVRKGEFLEPFK----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRY 238 (284)
T ss_dssp HHHT--TC-TTSEEEEESSTTGGGG----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHC
T ss_pred HHHc--CC-CCceEEEECcchhhcc----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhc
Confidence 7654 22 2379999999887653 468 99999854211 0000011 127999999 99
Q ss_pred cCCCcEEEEec
Q 019187 231 LRPGGVVSTQA 241 (345)
Q Consensus 231 LkpgGvlv~~~ 241 (345)
|+|||++++..
T Consensus 239 l~pgG~l~~e~ 249 (284)
T 1nv8_A 239 DTSGKIVLMEI 249 (284)
T ss_dssp CCTTCEEEEEC
T ss_pred CCCCCEEEEEE
Confidence 99999999864
No 119
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=1.9e-11 Score=111.15 Aligned_cols=118 Identities=20% Similarity=0.280 Sum_probs=90.6
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++.... ..++++++.+|+.+. ..++++||+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~---g~~~v~~~~~d~~~~--~~~~~~~D~ 169 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW---QVENVRFHLGKLEEA--ELEEAAYDG 169 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC---CCCCEEEEESCGGGC--CCCTTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc---CCCCEEEEECchhhc--CCCCCCcCE
Confidence 35679999999999999999987 445799999999999999999875420 135899999998775 123578999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHh
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~ 260 (345)
|++|..++ ..+++.+.++|+|||.+++...+. ..+..+.+.+++
T Consensus 170 v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~ 213 (258)
T 2pwy_A 170 VALDLMEP---------WKVLEKAALALKPDRFLVAYLPNI----TQVLELVRAAEA 213 (258)
T ss_dssp EEEESSCG---------GGGHHHHHHHEEEEEEEEEEESCH----HHHHHHHHHHTT
T ss_pred EEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHHHHH
Confidence 99986543 367999999999999999865332 234455555554
No 120
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.24 E-value=2.9e-11 Score=108.63 Aligned_cols=104 Identities=18% Similarity=0.246 Sum_probs=82.4
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++.+.. .+++++.+|+.+.. .+.++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~~--~~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPD-------TGITYERADLDKLH--LPQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCS-------SSEEEEECCGGGCC--CCTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhccc-------CCceEEEcChhhcc--CCCCCceEEE
Confidence 56799999999999999999883 34899999999999999998642 37999999987642 2367899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+...-...+ . ...+++.++++|+|||++++...+
T Consensus 113 ~~~~l~~~~--~--~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 113 SSLALHYVE--D--VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EESCGGGCS--C--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Eeccccccc--h--HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 754322111 1 258999999999999999986533
No 121
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.24 E-value=4.5e-11 Score=101.90 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=77.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++.. .+|+++|+++.+++.+++.. ++++++.+| +. .++++||+|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~v~~~~~d----~~-~~~~~~D~v 79 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF---------DSVITLSDP----KE-IPDNSVDFI 79 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC---------TTSEEESSG----GG-SCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC---------CCcEEEeCC----CC-CCCCceEEE
Confidence 356799999999999999999885 39999999999999999872 478999998 22 236789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+. ...+++.++++|+|||++++..
T Consensus 80 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 80 LFANSFHDMDD----KQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp EEESCSTTCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEccchhcccC----HHHHHHHHHHhcCCCCEEEEEE
Confidence 98654332221 2589999999999999998864
No 122
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.24 E-value=1.7e-11 Score=113.48 Aligned_cols=117 Identities=20% Similarity=0.312 Sum_probs=90.1
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... ++ .++++++.+|+.+.+ ++++||+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~---~~~~~D~ 184 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW--GL-IERVTIKVRDISEGF---DEKDVDA 184 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT--TC-GGGEEEECCCGGGCC---SCCSEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc--CC-CCCEEEEECCHHHcc---cCCccCE
Confidence 34579999999999999999987 44679999999999999999987643 11 247999999987763 2568999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHh
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~ 260 (345)
|++|.+++ .++++.+.++|+|||++++...+. .....+.+.+++
T Consensus 185 V~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l~~ 228 (277)
T 1o54_A 185 LFLDVPDP---------WNYIDKCWEALKGGGRFATVCPTT----NQVQETLKKLQE 228 (277)
T ss_dssp EEECCSCG---------GGTHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHH
T ss_pred EEECCcCH---------HHHHHHHHHHcCCCCEEEEEeCCH----HHHHHHHHHHHH
Confidence 99986543 367899999999999999865332 223444555554
No 123
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.24 E-value=2.4e-11 Score=110.40 Aligned_cols=103 Identities=19% Similarity=0.249 Sum_probs=82.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++.+.. ..++++++.+|+.+.. .++++||+|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~~--~~~~~fD~v 108 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAG-----VDRKVQVVQADARAIP--LPDESVHGV 108 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTT-----SCTTEEEEESCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhc-----cCCceEEEEcccccCC--CCCCCeeEE
Confidence 45679999999999999999987 36899999999999999998722 3468999999986542 236789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++...-+..+. ...+++.++++|+|||.+++.
T Consensus 109 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVPD----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcCC----HHHHHHHHHHHCCCCcEEEEE
Confidence 98644322211 257999999999999999876
No 124
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.24 E-value=3.6e-11 Score=111.33 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=81.0
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+ .+|+++|+++.+++.|++.+... + ..++++++.+|+.++ .++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~~-----~~~fD~v 133 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANS--E-NLRSKRVLLAGWEQF-----DEPVDRI 133 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTC--C-CCSCEEEEESCGGGC-----CCCCSEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhc--C-CCCCeEEEECChhhC-----CCCeeEE
Confidence 3567999999999999999985433 39999999999999999987643 1 135899999997543 2789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+.. ....+++.++++|+|||++++..
T Consensus 134 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 134 VSIGAFEHFGHE--RYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEESCGGGTCTT--THHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeCchhhcChH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 975322111101 12589999999999999999866
No 125
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.23 E-value=1.4e-11 Score=112.66 Aligned_cols=100 Identities=23% Similarity=0.274 Sum_probs=79.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++.. .+|+++|+++.+++.|++.++ +++++.+|+.++.. .++||+|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~---~~~fD~v 114 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDFSL---GRRFSAV 114 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTCCC---SCCEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHCCc---cCCcCEE
Confidence 456899999999999999999883 589999999999999998753 68999999877532 5789999
Q ss_pred EEcC-CCCCCCc-cccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDS-SDPIGPA-QELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~-~~p~~~~-~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++.. .-...+. .. ...+++.++++|+|||++++.
T Consensus 115 ~~~~~~l~~~~~~~~--~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 115 TCMFSSIGHLAGQAE--LDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EECTTGGGGSCHHHH--HHHHHHHHHHTEEEEEEEEEC
T ss_pred EEcCchhhhcCCHHH--HHHHHHHHHHhcCCCcEEEEE
Confidence 9864 2211111 11 247899999999999999985
No 126
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.23 E-value=1.6e-11 Score=110.30 Aligned_cols=105 Identities=18% Similarity=0.279 Sum_probs=81.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|..+..+++. .+|+++|+++.+++.|++.+... ..+++++.+|+.++. . .++||+|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v~ 101 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--L-PEPVDAIT 101 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--C-SSCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--C-CCCcCEEE
Confidence 4579999999999999999877 58999999999999999987643 257999999987652 2 47899999
Q ss_pred EcC-C-CCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 206 VDS-S-DPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 206 ~D~-~-~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+.. . ........ ...+++.++++|+|||++++...+
T Consensus 102 ~~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 102 ILCDSLNYLQTEAD--VKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp ECTTGGGGCCSHHH--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCCchhhcCCHHH--HHHHHHHHHHhcCCCeEEEEEcCC
Confidence 753 1 11111111 257899999999999999986543
No 127
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.23 E-value=1.5e-11 Score=116.25 Aligned_cols=114 Identities=12% Similarity=0.120 Sum_probs=77.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC--CCCEEEEEech------HhHHhhCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE--DPRVTLHIGDG------VAFLKAVP 197 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~--~~rv~v~~~D~------~~~l~~~~ 197 (345)
...+|||||||+|..+..+++.. ..+|+++|+++.+++.|++.......... ..+++++++|. .+.....+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46799999999998666666543 56899999999999999998754310000 01266778876 22222223
Q ss_pred CCCccEEEEcCCCCCC-CccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 198 EGTYDAVIVDSSDPIG-PAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 198 ~~~yDvIi~D~~~p~~-~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
.++||+|++-..-+.. ...+ ...+++.++++|||||+|++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~--~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRH--YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTT--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHH--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 5789999975432211 1112 25899999999999999998653
No 128
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.23 E-value=3.1e-11 Score=108.49 Aligned_cols=102 Identities=18% Similarity=0.215 Sum_probs=82.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|..+..+++. ..+|+++|+++.+++.+++... .++++++.+|+.+.. .++++||+|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v 120 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSLP--FENEQFEAI 120 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBCS--SCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcCC--CCCCCccEE
Confidence 35679999999999999999988 3589999999999999998752 368999999987652 236889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+. ...+++.++++|+|||++++..
T Consensus 121 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 121 MAINSLEWTEE----PLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEESCTTSSSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcChHhhccC----HHHHHHHHHHHhCCCeEEEEEE
Confidence 98544322221 2578999999999999998865
No 129
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.23 E-value=4.6e-11 Score=108.87 Aligned_cols=127 Identities=16% Similarity=0.103 Sum_probs=94.2
Q ss_pred CCCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 124 IPNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
.....+|||||||+|.++..+++. .+..+|++||+++.+++.+++.... .+++..+.+|+...... ...+.+
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGTTTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCccccccccceE
Confidence 345679999999999999999987 4457999999999999999987653 36899999998654321 125789
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec--cch---hhhhhHHHHHHHHHHhh-c
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA--ESI---WLHMHIIEDIVANCRQI-F 262 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~--~s~---~~~~~~~~~i~~~l~~~-F 262 (345)
|+|++|...|.. ...+++++++.|||||.+++.. .+. ......+.+..+.+++. |
T Consensus 149 DvVf~d~~~~~~------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF 209 (233)
T 4df3_A 149 DGLYADVAQPEQ------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGL 209 (233)
T ss_dssp EEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTC
T ss_pred EEEEEeccCChh------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCC
Confidence 999998776532 2578999999999999988742 111 11234556666777654 5
No 130
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.23 E-value=1.5e-11 Score=111.52 Aligned_cols=105 Identities=21% Similarity=0.291 Sum_probs=81.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++. ..+|+++|+++.+++.|++.+... ..+++++.+|+.+.. . .++||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~-~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--F-KNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--C-CSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--c-CCCccEE
Confidence 35679999999999999999987 358999999999999999987643 247999999987742 2 4689999
Q ss_pred EEcCCC-CCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSD-PIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~-p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.... +...... ...+++.++++|+|||++++..
T Consensus 110 ~~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 110 TMFFSTIMYFDEED--LRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EECSSGGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCchhcCCHHH--HHHHHHHHHHHcCCCeEEEEec
Confidence 975322 1111111 2578999999999999999865
No 131
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.23 E-value=2.8e-11 Score=126.68 Aligned_cols=114 Identities=13% Similarity=0.242 Sum_probs=90.2
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
..++|||+|||+|+++..+++. +..+|++||+|+.+++.|++++..+ ++.+.+++++.+|+.++++.. .++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~n--gl~~~~v~~i~~D~~~~l~~~-~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLN--GLTGRAHRLIQADCLAWLREA-NEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT--TCCSTTEEEEESCHHHHHHHC-CCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc--CCCccceEEEecCHHHHHHhc-CCCccEEE
Confidence 4679999999999999999886 4568999999999999999998764 444468999999999998865 68899999
Q ss_pred EcCCCCCCCc--cccC-----cHHHHHHHHhccCCCcEEEEeccc
Q 019187 206 VDSSDPIGPA--QELF-----EKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 206 ~D~~~p~~~~--~~l~-----t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+|++...... ...+ -.++++.+.++|+|||+|++.+++
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9986421100 0111 246788889999999999987655
No 132
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.23 E-value=4.1e-11 Score=111.30 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=88.2
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC--CCCCc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~~y 201 (345)
....+|||+|||+|+.+..+++. ++..+|+++|+++.+++.+++++... .-++++++.+|+.++.... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM----GVLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh----CCCcEEEEeCChHhcchhhhhccccC
Confidence 34579999999999999999885 33479999999999999999987654 2247999999998875421 14689
Q ss_pred cEEEEcCCCCC-CCcc-------------ccCcHHHHHHHHhccCCCcEEEEeccchh
Q 019187 202 DAVIVDSSDPI-GPAQ-------------ELFEKPFFESVAKALRPGGVVSTQAESIW 245 (345)
Q Consensus 202 DvIi~D~~~p~-~~~~-------------~l~t~ef~~~v~r~LkpgGvlv~~~~s~~ 245 (345)
|+|++|++... +... .-...++++.+.+.|+|||+++..+.+..
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 99999965421 1100 01236789999999999999998775543
No 133
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.22 E-value=2.9e-11 Score=104.39 Aligned_cols=102 Identities=21% Similarity=0.311 Sum_probs=79.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++. ..+++++|+++.+++.+++.++ +++++.+|+.+.. .+.++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~~--~~~~~~D~i 111 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVDQ--ISETDFDLI 111 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTSC--CCCCCEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccCC--CCCCceeEE
Confidence 45679999999999999999988 3589999999999999998763 4789999977642 235789999
Q ss_pred EEcC-CCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDS-SDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~-~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.. ......... ...+++.+.++|+|||++++..
T Consensus 112 ~~~~~~~~~~~~~~--~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 112 VSAGNVMGFLAEDG--REPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp EECCCCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcHHhhcChHH--HHHHHHHHHHHhCCCCEEEEEe
Confidence 9862 211111111 2578999999999999998865
No 134
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.22 E-value=2e-11 Score=118.77 Aligned_cols=112 Identities=20% Similarity=0.254 Sum_probs=85.8
Q ss_pred CCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhccccccc---C-CCCCCEEEEEechHhHHh----hC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAV---G-FEDPRVTLHIGDGVAFLK----AV 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~---~-~~~~rv~v~~~D~~~~l~----~~ 196 (345)
.+.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++..... + +..++++++.+|+.+... ..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 56799999999999999998862 456999999999999999998643210 1 244789999999877521 22
Q ss_pred CCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 197 ~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++++||+|++...-...+. ...+++.++++|||||+|++..
T Consensus 163 ~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN----KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCC----HHHHHHHHHHHcCCCCEEEEEE
Confidence 3678999998754332221 2589999999999999998854
No 135
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.22 E-value=2.4e-11 Score=109.98 Aligned_cols=106 Identities=18% Similarity=0.265 Sum_probs=82.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+.. .++++++.+|+.+.. .+.++||+|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~--~~~~~fD~v 162 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG------MPVGKFILASMETAT--LPPNTYDLI 162 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT------SSEEEEEESCGGGCC--CCSSCEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc------CCceEEEEccHHHCC--CCCCCeEEE
Confidence 356899999999999999988774 46899999999999999998753 257999999987642 235789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+... ...+++.++++|+|||++++..
T Consensus 163 ~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 163 VIQWTAIYLTDAD--FVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhCCHHH--HHHHHHHHHHhcCCCeEEEEEe
Confidence 9754322111111 2578999999999999998865
No 136
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.22 E-value=1.2e-11 Score=108.89 Aligned_cols=108 Identities=17% Similarity=0.299 Sum_probs=82.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++.. .++++++.+|+.+. ..+.++||+|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~--~~~~~~fD~v 111 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGG-FPNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL--DFPSASFDVV 111 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTT-CCCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC--CSCSSCEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcC-CCcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC--CCCCCcccEE
Confidence 456799999999999999999874 33899999999999999998753 35899999998764 2335789999
Q ss_pred EEcCCC---------CCCCcc--ccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSD---------PIGPAQ--ELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~---------p~~~~~--~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...- ++.... .--...+++.+.++|+|||++++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 974321 111100 0012579999999999999999865
No 137
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.22 E-value=4.9e-11 Score=105.55 Aligned_cols=101 Identities=20% Similarity=0.261 Sum_probs=79.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh--CCCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA--VPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~~yDv 203 (345)
.+.+|||||||+|..+..+++. ..+|+++|+++.+++.|++. .+++++.+|..+.... ...++||+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCccE
Confidence 5689999999999999999988 35899999999999999986 2467888888776322 12456999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
|++...-. .. -...+++.++++|+|||++++...+
T Consensus 120 v~~~~~l~-~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 120 ICANFALL-HQ----DIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EEEESCCC-SS----CCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECchhh-hh----hHHHHHHHHHHHhCCCeEEEEEecC
Confidence 99865433 11 1258999999999999999987643
No 138
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.22 E-value=5.4e-11 Score=109.12 Aligned_cols=107 Identities=22% Similarity=0.299 Sum_probs=83.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+... ++ .++++++.+|+.+.- .++++||+|
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~fD~v 133 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAA--GL-ANRVTFSYADAMDLP--FEDASFDAV 133 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhc--CC-CcceEEEECccccCC--CCCCCccEE
Confidence 356799999999999999998865 469999999999999999887643 22 347999999987642 235789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+. ...+++.++++|+|||++++..
T Consensus 134 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 134 WALESLHHMPD----RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEESCTTTSSC----HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEechhhhCCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 97543322211 2589999999999999998865
No 139
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.21 E-value=2.6e-11 Score=109.23 Aligned_cols=104 Identities=16% Similarity=0.113 Sum_probs=79.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH--hhCCCCCc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL--KAVPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l--~~~~~~~y 201 (345)
....+|||||||+|.++..+++.. +..+|++||+++.+++.+.+.... .++++++.+|+.+.. .. ..++|
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~------~~~v~~~~~d~~~~~~~~~-~~~~~ 148 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK------RTNIIPVIEDARHPHKYRM-LIAMV 148 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH------CTTEEEECSCTTCGGGGGG-GCCCE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc------cCCeEEEEcccCChhhhcc-cCCcE
Confidence 346799999999999999999873 346899999998877766665443 157999999987742 22 25789
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|++|...+.. ...+++.+.++|+|||++++..
T Consensus 149 D~V~~~~~~~~~------~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 149 DVIFADVAQPDQ------TRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEcCCCccH------HHHHHHHHHHHcCCCeEEEEEE
Confidence 999998763211 1456888999999999999854
No 140
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=3.9e-11 Score=110.90 Aligned_cols=100 Identities=17% Similarity=0.289 Sum_probs=79.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++.+ ++++++.+|+.++. . +++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNFR--V-DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhCC--c-CCCcCEE
Confidence 35679999999999999999983 469999999999999999865 36788999987642 2 5789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-...+. ...+++.++++|+|||.+++...
T Consensus 122 ~~~~~l~~~~d----~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 122 FSNAMLHWVKE----PEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhhCcC----HHHHHHHHHHhcCCCcEEEEEec
Confidence 98644322111 25789999999999999998653
No 141
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.21 E-value=1.5e-11 Score=114.18 Aligned_cols=115 Identities=13% Similarity=0.106 Sum_probs=82.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~yDvI 204 (345)
.+.+|||||||+|..+..+++.. .+|+++|+++.+++.|++............++.+..+|+.....+ .+.++||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 56799999999999999999883 499999999999999988653211011124788999998776422 136889999
Q ss_pred EEc--CCCCCCCc--cccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVD--SSDPIGPA--QELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D--~~~p~~~~--~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++. ........ ..-....+++.++++|+|||++++...
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 984 22111110 000025799999999999999998653
No 142
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.21 E-value=5.7e-11 Score=113.70 Aligned_cols=132 Identities=12% Similarity=0.099 Sum_probs=95.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
...++|||+|||+|.++.. ++ +..+|++||+++.+++.|++++..+ ++ ..+++++.+|+.+++ ++||+|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n--~l-~~~v~~~~~D~~~~~-----~~fD~V 262 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLN--KL-EHKIIPILSDVREVD-----VKGNRV 262 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCGGGCC-----CCEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECChHHhc-----CCCcEE
Confidence 3567999999999999999 87 3679999999999999999998764 22 248999999998875 679999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCCcE
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVI 281 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g~w 281 (345)
++|++.. ..++++.+.++|+|||++++.+.+.. .....+.+++.+ +........+..|..+.|
T Consensus 263 i~dpP~~--------~~~~l~~~~~~L~~gG~l~~~~~~~~-----~~~~~~~l~~~~-~~~i~~~~~v~~~~p~~~ 325 (336)
T 2yx1_A 263 IMNLPKF--------AHKFIDKALDIVEEGGVIHYYTIGKD-----FDKAIKLFEKKC-DCEVLEKRIVKSYAPREY 325 (336)
T ss_dssp EECCTTT--------GGGGHHHHHHHEEEEEEEEEEEEESS-----SHHHHHHHHHHS-EEEEEEEEEEEEEETTEE
T ss_pred EECCcHh--------HHHHHHHHHHHcCCCCEEEEEEeecC-----chHHHHHHHHhc-CCcEEEEEEEeccCCCCC
Confidence 9986421 23789999999999999988654443 233444455543 111112234555544444
No 143
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=3.2e-11 Score=109.02 Aligned_cols=106 Identities=11% Similarity=0.104 Sum_probs=81.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC---CCCCc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV---PEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~~y 201 (345)
....+|||||||+|..+..+++... +|++||+++.+++.|++.++ ..+++++.+|+.+..... ....|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 3457999999999999999998843 89999999999999999874 248999999987643211 01359
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|++.......+... ...+++.++++|+|||++++..
T Consensus 126 d~v~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEK--RELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp CEEEEESSSTTSCGGG--HHHHHHHHHHHHTTTCEEEEEE
T ss_pred cEEEEcchhhcCCHHH--HHHHHHHHHHHcCCCCEEEEEe
Confidence 9999876554333222 2589999999999999876643
No 144
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.21 E-value=5.6e-11 Score=105.87 Aligned_cols=112 Identities=12% Similarity=0.219 Sum_probs=83.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccccc-CCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
+...+|||||||+|.++..+++. ..+|+++|+++.+++.+++.+..... .....+++++.+|+.... .+.++||+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~ 104 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--FHDSSFDF 104 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--SCTTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--CCCCceeE
Confidence 35679999999999999999988 35899999999999999998765411 111247899999987642 23688999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|++...-...+... ....+++.++++|+|||++++..
T Consensus 105 v~~~~~l~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 105 AVMQAFLTSVPDPK-ERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEESCGGGCCCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcchhhcCCCHH-HHHHHHHHHHHHcCCCeEEEEEE
Confidence 99864322111100 01279999999999999998864
No 145
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.21 E-value=1.3e-11 Score=108.43 Aligned_cols=120 Identities=14% Similarity=0.098 Sum_probs=84.6
Q ss_pred hHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech
Q 019187 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (345)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~ 189 (345)
..|.+++..+.. .+.+.+|||||||+|..+..++... ..+|+++|+++.+++.|++++... .++++++.+|+
T Consensus 9 ~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~ 80 (209)
T 2p8j_A 9 PQLYRFLKYCNE--SNLDKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDI 80 (209)
T ss_dssp THHHHHHHHHHH--SSSCSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCT
T ss_pred hhHHHHHHHHhc--cCCCCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECch
Confidence 345555544332 2356899999999998754444443 358999999999999999987643 25788999998
Q ss_pred HhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 190 ~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.+.- .++++||+|++...-...+... ...+++.++++|+|||++++..
T Consensus 81 ~~~~--~~~~~fD~v~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 81 RKLP--FKDESMSFVYSYGTIFHMRKND--VKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp TSCC--SCTTCEEEEEECSCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhCC--CCCCceeEEEEcChHHhCCHHH--HHHHHHHHHHHcCCCcEEEEEE
Confidence 7642 2357899999753321111111 3578999999999999998865
No 146
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.20 E-value=7.5e-11 Score=111.04 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=82.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+ .+|+++|+++.+++.|++.+... ++ .++++++.+|+.++ +++||+|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-----~~~fD~v 159 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASI--DT-NRSRQVLLQGWEDF-----AEPVDRI 159 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTS--CC-SSCEEEEESCGGGC-----CCCCSEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEECChHHC-----CCCcCEE
Confidence 3567999999999999999988743 48999999999999999987643 22 25799999997554 3789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-...+.. ....+++.+.++|+|||++++...
T Consensus 160 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 160 VSIEAFEHFGHE--NYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EEESCGGGTCGG--GHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEeChHHhcCHH--HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 975432211111 136899999999999999998653
No 147
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.19 E-value=1.4e-11 Score=115.60 Aligned_cols=110 Identities=16% Similarity=0.165 Sum_probs=82.8
Q ss_pred CCCceEEEEeccchHHHHHHH-hcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVS-RHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll-~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
+.+.+|||||||+|..+..++ +..+..+|+++|+++.+++.|++++... +. ..+++++.+|+.+.. . .++||+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~--~-~~~fD~ 190 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH--AL-AGQITLHRQDAWKLD--T-REGYDL 190 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS--TT-GGGEEEEECCGGGCC--C-CSCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEECchhcCC--c-cCCeEE
Confidence 456899999999999999985 3344679999999999999999987653 22 246999999987752 2 388999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|++...-...+... ....+++.++++|+|||++++..
T Consensus 191 v~~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 191 LTSNGLNIYEPDDA-RVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EECCSSGGGCCCHH-HHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECChhhhcCCHH-HHHHHHHHHHHhcCCCeEEEEEe
Confidence 99754322111110 01348999999999999999865
No 148
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.19 E-value=2.8e-11 Score=108.23 Aligned_cols=105 Identities=15% Similarity=0.072 Sum_probs=80.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-----CCcEEEEEECCHHHHHHHHhccccccc-CCCCCCEEEEEechHhHH----h
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-----SVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFL----K 194 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-----~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~D~~~~l----~ 194 (345)
....+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++..... .+..++++++.+|+.+.. .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 345799999999999999998874 245999999999999999998765310 001358999999988743 2
Q ss_pred hCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 195 AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 195 ~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
. .++||+|+++...+ .+++.+.+.|+|||++++..
T Consensus 159 ~--~~~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 159 E--LGLFDAIHVGASAS----------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp H--HCCEEEEEECSBBS----------SCCHHHHHHEEEEEEEEEEE
T ss_pred c--CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 2 46799999876543 23478899999999999854
No 149
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.19 E-value=4.2e-11 Score=116.17 Aligned_cols=100 Identities=16% Similarity=0.226 Sum_probs=80.2
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+++||||| |+|.++..+++..+..+|++||+|+.+++.|++++... ++. +++++.+|+.+.+.....++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~--g~~--~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI--GYE--DIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--TCC--CEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC--CEEEEEChhhhhchhhccCCccEEE
Confidence 467999999 99999999988754479999999999999999998764 232 7999999998754421146899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCc
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGG 235 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgG 235 (345)
+|++. +.. . ...+++.+.++|+|||
T Consensus 247 ~~~p~--~~~-~--~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 247 TDPPE--TLE-A--IRAFVGRGIATLKGPR 271 (373)
T ss_dssp ECCCS--SHH-H--HHHHHHHHHHTBCSTT
T ss_pred ECCCC--chH-H--HHHHHHHHHHHcccCC
Confidence 98743 221 1 2789999999999999
No 150
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=5.2e-11 Score=105.49 Aligned_cols=102 Identities=19% Similarity=0.185 Sum_probs=79.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++... .-++++++.+|+...+.. .++||+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~fD~ 149 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL----GYDNVIVIVGDGTLGYEP--LAPYDR 149 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEESCGGGCCGG--GCCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCeEEEECCcccCCCC--CCCeeE
Confidence 356799999999999999998874 3369999999999999999987653 224699999998654332 468999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
|+++...+.. .+.+.++|+|||++++...
T Consensus 150 v~~~~~~~~~----------~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 150 IYTTAAGPKI----------PEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEESSBBSSC----------CHHHHHTEEEEEEEEEEES
T ss_pred EEECCchHHH----------HHHHHHHcCCCcEEEEEEC
Confidence 9987654321 1578999999999998653
No 151
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.19 E-value=4.9e-11 Score=113.00 Aligned_cols=103 Identities=23% Similarity=0.265 Sum_probs=81.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||||||+|.++..+++..+ ..+|+++|+++.+++.|++++... .-++++++.+|+.+.+.. .++||+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----g~~~v~~~~~d~~~~~~~--~~~fD~ 147 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL----GIENVIFVCGDGYYGVPE--FSPYDV 147 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG--GCCEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCeEEEECChhhcccc--CCCeEE
Confidence 3567999999999999999988743 357999999999999999987653 224599999998875442 478999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
|+++...+..+ +.+.+.|+|||+++++...
T Consensus 148 Iv~~~~~~~~~----------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 148 IFVTVGVDEVP----------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEECSBBSCCC----------HHHHHHEEEEEEEEEEBCB
T ss_pred EEEcCCHHHHH----------HHHHHhcCCCcEEEEEECC
Confidence 99876543211 5788899999999997643
No 152
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.19 E-value=4e-11 Score=108.68 Aligned_cols=107 Identities=10% Similarity=0.120 Sum_probs=84.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|.++..+++..+..+|+++|+++..++.|++++... ++. .+++++.+|+.+.+.. .++||+|
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~-~~i~~~~~d~l~~l~~--~~~~D~I 88 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH--GLK-EKIQVRLANGLAAFEE--TDQVSVI 88 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCT-TTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEEECchhhhccc--CcCCCEE
Confidence 3457999999999999999999866779999999999999999998764 333 3899999998776542 2369998
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++.. ....+ -.+++..+.+.|+++|.|++|..
T Consensus 89 viaG-----~Gg~~-i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 89 TIAG-----MGGRL-IARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEE-----ECHHH-HHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEcC-----CChHH-HHHHHHHHHHHhCCCCEEEEECC
Confidence 8631 11111 35789999999999999999854
No 153
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.19 E-value=2e-11 Score=117.05 Aligned_cols=108 Identities=19% Similarity=0.298 Sum_probs=84.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... ..+++++.+|+.++. .++||+|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----~~~~~~~~~d~~~~~----~~~fD~Iv 266 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-----GVEGEVFASNVFSEV----KGRFDMII 266 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTC----CSCEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCEEEEccccccc----cCCeeEEE
Confidence 356999999999999999998755568999999999999999987653 234678899977652 57899999
Q ss_pred EcCCCCCCCc-cccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 206 VDSSDPIGPA-QELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 206 ~D~~~p~~~~-~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++.+.+.+.. ..-....+++.++++|+|||.+++...
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 8876543221 011135799999999999999988653
No 154
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.19 E-value=1.3e-11 Score=115.32 Aligned_cols=110 Identities=19% Similarity=0.248 Sum_probs=82.2
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++. ..+|++||+++.+++.|++.+....... ..+++++.+|+.++. . .++||+|+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~v~~~~~d~~~~~--~-~~~fD~v~ 155 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADV-RDRCTLVQGDMSAFA--L-DKRFGTVV 155 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHH-HTTEEEEECBTTBCC--C-SCCEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhccccc-ccceEEEeCchhcCC--c-CCCcCEEE
Confidence 4569999999999999999988 3589999999999999999876430000 058999999987752 2 67899998
Q ss_pred EcCC-CCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 206 VDSS-DPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 206 ~D~~-~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+... ........ ...+++.++++|+|||+|++...+
T Consensus 156 ~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 156 ISSGSINELDEAD--RRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp ECHHHHTTSCHHH--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCcccccCCHHH--HHHHHHHHHHHcCCCcEEEEEeec
Confidence 6321 11111111 258999999999999999997644
No 155
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.19 E-value=5.3e-11 Score=106.38 Aligned_cols=118 Identities=24% Similarity=0.250 Sum_probs=84.7
Q ss_pred HHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccC-CCCCCEEEEEech
Q 019187 112 YQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVG-FEDPRVTLHIGDG 189 (345)
Q Consensus 112 Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~-~~~~rv~v~~~D~ 189 (345)
+..++..+.. ......+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++...... +...+++++.+|+
T Consensus 64 ~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 64 HAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp HHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred HHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 3445544431 12346799999999999999998863 3359999999999999999887643000 0134799999998
Q ss_pred HhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 190 ~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
...... .++||+|+++...+ .+++.+.++|+|||++++...
T Consensus 143 ~~~~~~--~~~fD~i~~~~~~~----------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 143 RMGYAE--EAPYDAIHVGAAAP----------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp GGCCGG--GCCEEEEEECSBBS----------SCCHHHHHTEEEEEEEEEEES
T ss_pred ccCccc--CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEEe
Confidence 754322 46799999876532 234688999999999998653
No 156
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.19 E-value=3.6e-11 Score=113.27 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=83.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++.. ..+|++||+++.+++.|++++... ++ .++++++.+|+.+.- .++++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~--~~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRAREL--RI-DDHVRSRVCNMLDTP--FDKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC--CCTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCceEEEECChhcCC--CCCCCEeEE
Confidence 456799999999999999998874 358999999999999999987653 22 248999999987642 235889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-.... ...+++.+.++|+|||++++..
T Consensus 190 ~~~~~l~~~~-----~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 190 WNNESTMYVD-----LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEESCGGGSC-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhCC-----HHHHHHHHHHHcCCCcEEEEEE
Confidence 9743322111 4689999999999999998865
No 157
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.19 E-value=6e-11 Score=103.93 Aligned_cols=100 Identities=15% Similarity=0.280 Sum_probs=79.5
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcC
Q 019187 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~ 208 (345)
+|||||||+|..+..+++. ..+|+++|+++.+++.|++.+... ..+++++.+|+.+.. .+.++||+|++..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEK-----GVKITTVQSNLADFD--IVADAWEGIVSIF 102 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHH-----TCCEEEECCBTTTBS--CCTTTCSEEEEEC
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcChhhcC--CCcCCccEEEEEh
Confidence 9999999999999999987 358999999999999999987653 237999999987652 2357899999843
Q ss_pred CCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 209 SDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 209 ~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
. .. .... ...+++.+.++|+|||.+++..
T Consensus 103 ~-~~-~~~~--~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 103 C-HL-PSSL--RQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp C-CC-CHHH--HHHHHHHHHTTCCSSEEEEEEE
T ss_pred h-cC-CHHH--HHHHHHHHHHhcCCCcEEEEEE
Confidence 2 11 1111 3578999999999999998875
No 158
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.18 E-value=3e-11 Score=108.40 Aligned_cols=106 Identities=15% Similarity=0.207 Sum_probs=82.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+++. ..+++++|+++.+++.|++.+... ..+++++.+|+.++. . .++||+|+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v~ 106 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQ-----GLKPRLACQDISNLN--I-NRKFDLIT 106 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHT-----TCCCEEECCCGGGCC--C-SCCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhc-----CCCeEEEecccccCC--c-cCCceEEE
Confidence 5679999999999999999988 358999999999999999987643 227899999987653 2 37899999
Q ss_pred EcC-CCCCCCc-cccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 206 VDS-SDPIGPA-QELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 206 ~D~-~~p~~~~-~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+.. .-+..+. .. ...+++.++++|+|||++++...+
T Consensus 107 ~~~~~l~~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 107 CCLDSTNYIIDSDD--LKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp ECTTGGGGCCSHHH--HHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EcCccccccCCHHH--HHHHHHHHHHhcCCCcEEEEEecC
Confidence 854 2221111 11 257899999999999999986533
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.18 E-value=5e-11 Score=114.64 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=82.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
+.++|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ ..+++++.+|+.+. ..+.++||+|+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~~~~~fD~Ii 138 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKAN--KL-DHVVTIIKGKVEEV--ELPVEKVDIII 138 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTC--CCSSSCEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHc--CC-CCcEEEEECcHHHc--cCCCCceEEEE
Confidence 5679999999999999999998 467999999995 999999887653 22 34799999998776 23358899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++......... -....+++.+.++|+|||+++...
T Consensus 139 s~~~~~~l~~~-~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 139 SEWMGYCLFYE-SMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp ECCCBBTBTBT-CCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EccccccccCc-hhHHHHHHHHHHhCCCCCEEcccc
Confidence 87532221111 113578899999999999997544
No 160
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.18 E-value=5.1e-11 Score=109.92 Aligned_cols=120 Identities=18% Similarity=0.249 Sum_probs=90.2
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++....+. -.++++++.+|+.+.. .+.++||+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~-~~~~v~~~~~d~~~~~--~~~~~~D~ 174 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ-PPDNWRLVVSDLADSE--LPDGSVDR 174 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS-CCTTEEEECSCGGGCC--CCTTCEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCCcEEEEECchHhcC--CCCCceeE
Confidence 35579999999999999999885 34579999999999999999987532000 1357999999987652 23578999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHh
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~ 260 (345)
|++|..++ .++++.+.++|+|||.+++...+. +.+..+.+.+++
T Consensus 175 v~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l~~ 218 (280)
T 1i9g_A 175 AVLDMLAP---------WEVLDAVSRLLVAGGVLMVYVATV----TQLSRIVEALRA 218 (280)
T ss_dssp EEEESSCG---------GGGHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHH
T ss_pred EEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHHHHh
Confidence 99987643 267999999999999999865432 334455555554
No 161
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.18 E-value=7.1e-11 Score=114.76 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=83.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.+.++|||||||+|.++..+++. +..+|++||++ .+++.|++++... ++ ..+++++.+|+.++.. .++||+|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~---~~~~D~I 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKAN--NL-DHIVEVIEGSVEDISL---PEKVDVI 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHT--TC-TTTEEEEESCGGGCCC---SSCEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHc--CC-CCeEEEEECchhhcCc---CCcceEE
Confidence 35689999999999999999988 35699999999 9999999987653 22 3579999999877632 3789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
+++......... -....+++.+.+.|+|||+++....
T Consensus 134 v~~~~~~~l~~e-~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 134 ISEWMGYFLLRE-SMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EECCCBTTBTTT-CTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEcChhhcccch-HHHHHHHHHHHhhCCCCeEEEEecC
Confidence 987643221111 1135689999999999999987543
No 162
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.18 E-value=1.5e-10 Score=102.02 Aligned_cols=150 Identities=18% Similarity=0.198 Sum_probs=94.6
Q ss_pred HHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH
Q 019187 113 QEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (345)
Q Consensus 113 ~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~ 192 (345)
.+++....+. .+..+|||||||+|+.+..+++. ..+|++||+++.. ..++++++.+|+.+.
T Consensus 14 ~ei~~~~~~~--~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~---------------~~~~v~~~~~D~~~~ 74 (191)
T 3dou_A 14 EFLLDRYRVV--RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME---------------EIAGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHCCS--CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC---------------CCTTCEEEECCTTSS
T ss_pred HHHHHHcCCC--CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc---------------cCCCeEEEEccccCH
Confidence 4555444332 35679999999999999999988 5689999999741 124799999997542
Q ss_pred H-----hh-CC---CCCccEEEEcCCCCCCCccc---c----CcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHH
Q 019187 193 L-----KA-VP---EGTYDAVIVDSSDPIGPAQE---L----FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVA 256 (345)
Q Consensus 193 l-----~~-~~---~~~yDvIi~D~~~p~~~~~~---l----~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~ 256 (345)
- .+ .. .++||+|++|.......... . .....++.+.++|+|||.|++.. +.......+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~----~~~~~~~~~~~ 150 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ----FQGDMTNDFIA 150 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE----ECSTHHHHHHH
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE----cCCCCHHHHHH
Confidence 1 11 10 14899999997543221100 0 01356788899999999999753 22233456777
Q ss_pred HHHhhcCCcceEEEEEEeec--CCCcEEEEEEecC
Q 019187 257 NCRQIFKGSVNYAWTTVPTY--PSGVIGFMLCSTE 289 (345)
Q Consensus 257 ~l~~~F~~~v~~~~~~vP~y--~~g~w~~~~ask~ 289 (345)
.++..| ..+.. .-|.- +...-.|++|...
T Consensus 151 ~l~~~F-~~v~~---~kP~asR~~s~E~y~v~~~~ 181 (191)
T 3dou_A 151 IWRKNF-SSYKI---SKPPASRGSSSEIYIMFFGF 181 (191)
T ss_dssp HHGGGE-EEEEE---ECC------CCEEEEEEEEE
T ss_pred HHHHhc-CEEEE---ECCCCccCCCceEEEEEeee
Confidence 888888 33322 22322 2223457777653
No 163
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.18 E-value=7.5e-11 Score=113.31 Aligned_cols=112 Identities=14% Similarity=0.178 Sum_probs=86.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|.++.+++... +..+|+++|+|+.+++.|++++... ++ .+++++.+|+.++... .+.||+
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~--g~--~~i~~~~~D~~~~~~~--~~~~D~ 275 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS--GL--SWIRFLRADARHLPRF--FPEVDR 275 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT--TC--TTCEEEECCGGGGGGT--CCCCSE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc--CC--CceEEEeCChhhCccc--cCCCCE
Confidence 345799999999999999998864 4578999999999999999998754 22 2799999999887542 456999
Q ss_pred EEEcCCCCCCCc--ccc--CcHHHHHHHHhccCCCcEEEEecc
Q 019187 204 VIVDSSDPIGPA--QEL--FEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 204 Ii~D~~~p~~~~--~~l--~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
|++|++...... ..+ .-..+++.++++|+|||.+++.+.
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999976433221 111 115788999999999999998654
No 164
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.18 E-value=1.3e-10 Score=110.29 Aligned_cols=114 Identities=15% Similarity=0.213 Sum_probs=86.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... .-++++++.+|+..+.. . .++||+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~----g~~~v~~~~~D~~~~~~-~-~~~fD~ 190 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL----GVLNVILFHSSSLHIGE-L-NVEFDK 190 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH----TCCSEEEESSCGGGGGG-G-CCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh----CCCeEEEEECChhhccc-c-cccCCE
Confidence 345799999999999999998863 3468999999999999999987654 22469999999988654 2 568999
Q ss_pred EEEcCCCCC-CC---cccc--------------CcHHHHHHHHhccCCCcEEEEeccch
Q 019187 204 VIVDSSDPI-GP---AQEL--------------FEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 204 Ii~D~~~p~-~~---~~~l--------------~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
|++|++... +. .+.. ....+++.+.+.|||||+++..+.+.
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 999976321 11 0000 01478999999999999999876554
No 165
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.18 E-value=3.1e-11 Score=111.77 Aligned_cols=111 Identities=17% Similarity=0.189 Sum_probs=84.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++.+... +. ..+++++.+|+.+.... +.++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~-~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNM--KR-RFKVFFRAQDSYGRHMD-LGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTS--CC-SSEEEEEESCTTTSCCC-CSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhc--CC-CccEEEEECCccccccC-CCCCcCEE
Confidence 456799999999999999988874 558999999999999999987643 11 24799999998765211 25789999
Q ss_pred EEcCCCCC--CCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPI--GPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~--~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-+. ..... ...+++.++++|+|||.+++...
T Consensus 138 ~~~~~l~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 138 SSQFSFHYAFSTSES--LDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEESCGGGGGSSHHH--HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhhhcCCHHH--HHHHHHHHHHhcCCCCEEEEEEC
Confidence 98654321 11111 25799999999999999998653
No 166
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.17 E-value=8.7e-12 Score=112.62 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=80.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|..+..+++.. .+|+++|+++.+++.|++++... ++ .++++++.+|+.++.. .++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~---~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVY--GI-ADKIEFICGDFLLLAS---FLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHGG---GCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--CC-CcCeEEEECChHHhcc---cCCCCEEE
Confidence 56799999999999999999873 79999999999999999987653 11 1489999999988763 57899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++.+....... ...+..++++|+|||++++.
T Consensus 150 ~~~~~~~~~~~----~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGGPDYA----TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSSGGGG----GSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcCCcchh----hhHHHHHHhhcCCcceeHHH
Confidence 88654321111 11445688999999997653
No 167
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.17 E-value=2.1e-11 Score=110.27 Aligned_cols=109 Identities=10% Similarity=-0.024 Sum_probs=78.0
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECC-HHHHHHH---HhcccccccCCCCCCEEEEEechHhHHhhCCCCCc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEID-KMVVDVS---KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid-~~vi~~a---r~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~y 201 (345)
...+|||||||+|..+..+++..+..+|++||++ +.|++.| ++..... .-++++++.+|+..+.... .+.+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~----~~~~v~~~~~d~~~l~~~~-~d~v 98 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG----GLSNVVFVIAAAESLPFEL-KNIA 98 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----CCSSEEEECCBTTBCCGGG-TTCE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----CCCCeEEEEcCHHHhhhhc-cCeE
Confidence 5679999999999999999876556799999999 7787777 6665432 2357999999987762222 3567
Q ss_pred cEEEEcCCCCCCC-ccccCcHHHHHHHHhccCCCcEEEE
Q 019187 202 DAVIVDSSDPIGP-AQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 202 DvIi~D~~~p~~~-~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
|.|.+..+.+... .......++++.++++|||||.+++
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 7777654322100 0001125789999999999999988
No 168
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.17 E-value=5.3e-11 Score=108.18 Aligned_cols=106 Identities=8% Similarity=0.127 Sum_probs=84.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|.++..+++..+..+|+++|+|+..++.|++++... ++. .+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~--gl~-~~I~~~~gD~l~~~~~--~~~~D~I 94 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH--GLT-SKIDVRLANGLSAFEE--ADNIDTI 94 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT--TCT-TTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-CcEEEEECchhhcccc--ccccCEE
Confidence 4557999999999999999999866779999999999999999998764 333 4899999999887642 3479998
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.. .... .-.+++....+.|+++|.|++|.
T Consensus 95 viaG-----mGg~-lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 95 TICG-----MGGR-LIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp EEEE-----ECHH-HHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEeC-----CchH-HHHHHHHHHHHHhCcCCEEEEEC
Confidence 8521 1111 13578888899999999999985
No 169
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.17 E-value=4.8e-11 Score=107.10 Aligned_cols=105 Identities=19% Similarity=0.201 Sum_probs=79.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCCC------cEEEEEECCHHHHHHHHhccccccc-CCCCCCEEEEEechHhHHhhCCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSV------EKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPE 198 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~------~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~~ 198 (345)
...+|||||||+|..+..+++..+. .+|+++|+++.+++.|++++..... .+..++++++.+|+.+.+.. .
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~ 161 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP--N 161 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG--G
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc--C
Confidence 4579999999999999999885332 4899999999999999998764200 00035799999998874332 3
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++||+|+++...+. +.+.+.+.|+|||++++...
T Consensus 162 ~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPD----------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSS----------CCHHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHH----------HHHHHHHHhcCCCEEEEEEe
Confidence 78999998765432 23678999999999998653
No 170
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.17 E-value=3.4e-11 Score=108.08 Aligned_cols=93 Identities=10% Similarity=0.148 Sum_probs=76.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCC-CCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP-EGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~yDv 203 (345)
+.+.+|||||||+|..+..+++. ..+|+++|+++.+++.|+++. ++++++.+|+.+.+. .+ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~-~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANA---------PHADVYEWNGKGELP-AGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC---------TTSEEEECCSCSSCC-TTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC---------CCceEEEcchhhccC-CcCCCCEEE
Confidence 45689999999999999999988 459999999999999999873 368999999854443 23 578999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
|++.. + ...+++.++++|+|||+++.
T Consensus 115 v~~~~-~---------~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 115 IVSRR-G---------PTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEES-C---------CSGGGGGHHHHEEEEEEEEE
T ss_pred EEeCC-C---------HHHHHHHHHHHcCCCcEEEE
Confidence 99862 1 13678899999999999983
No 171
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.16 E-value=7.9e-11 Score=108.88 Aligned_cols=148 Identities=15% Similarity=0.161 Sum_probs=100.2
Q ss_pred CCceEEEEeccchHHHHHHHhc--------CC----CcEEEEEECCH---HHHH-----------HHHhccccccc----
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--------SS----VEKIDICEIDK---MVVD-----------VSKQFFPDVAV---- 175 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--------~~----~~~V~~VEid~---~vi~-----------~ar~~~~~~~~---- 175 (345)
++.+||+||+|+|..+..+++. +. ..+++++|.+| +.+. .+++.+..+..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988886542 32 24899999987 3333 45554332100
Q ss_pred ----CCCC--CCEEEEEechHhHHhhCCC---CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhh
Q 019187 176 ----GFED--PRVTLHIGDGVAFLKAVPE---GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWL 246 (345)
Q Consensus 176 ----~~~~--~rv~v~~~D~~~~l~~~~~---~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~ 246 (345)
.+.+ .+++++.+|+.+.++..+. ..||+|++|.+.|... +.+++.++|+.++++|+|||+|++.+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~-p~lw~~~~l~~l~~~L~pGG~l~tysaa--- 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKN-PDMWTQNLFNAMARLARPGGTLATFTSA--- 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTC-GGGCCHHHHHHHHHHEEEEEEEEESCCB---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccC-hhhcCHHHHHHHHHHcCCCcEEEEEeCC---
Confidence 1222 3678999999999887522 2799999998876543 3788999999999999999999985432
Q ss_pred hhhHHHHHHHHHHhh-cCCcceEEEEEEeecCCCcEEEEEEecC
Q 019187 247 HMHIIEDIVANCRQI-FKGSVNYAWTTVPTYPSGVIGFMLCSTE 289 (345)
Q Consensus 247 ~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~y~~g~w~~~~ask~ 289 (345)
. .+.+.+..+ |. ...+|.++ +-..++.+.+.
T Consensus 216 --~---~vrr~L~~aGF~------v~~~~g~~-~kr~m~~a~~~ 247 (257)
T 2qy6_A 216 --G---FVRRGLQEAGFT------MQKRKGFG-RKREMLCGVME 247 (257)
T ss_dssp --H---HHHHHHHHHTEE------EEEECCST-TCCCEEEEEEC
T ss_pred --H---HHHHHHHHCCCE------EEeCCCCC-CCCceEEEEec
Confidence 1 233445544 51 24567764 34456666665
No 172
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.16 E-value=4.7e-11 Score=111.14 Aligned_cols=107 Identities=21% Similarity=0.352 Sum_probs=83.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++..+ .+|+++|+++.+++.|++.+... ++ .++++++.+|+.+.. .++++||+|
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~fD~v 154 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQA--GL-ADNITVKYGSFLEIP--CEDNSYDFI 154 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHH--TC-TTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhc--CC-CcceEEEEcCcccCC--CCCCCEeEE
Confidence 4567999999999999999988743 48999999999999999876543 22 358999999977642 236789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+. ...+++.++++|+|||++++..
T Consensus 155 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 155 WSQDAFLHSPD----KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 97543221111 2689999999999999998865
No 173
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.16 E-value=1.1e-10 Score=104.60 Aligned_cols=97 Identities=24% Similarity=0.335 Sum_probs=78.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... .+++++.+|+.+.+. ..++||+|
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~--~~~~fD~v 138 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY------NNIKLILGDGTLGYE--EEKPYDRV 138 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC------SSEEEEESCGGGCCG--GGCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc------CCeEEEECCcccccc--cCCCccEE
Confidence 356799999999999999999884 69999999999999999987643 289999999877333 15789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+++...+.. .+.+.++|+|||++++..
T Consensus 139 ~~~~~~~~~----------~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 139 VVWATAPTL----------LCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp EESSBBSSC----------CHHHHHTEEEEEEEEEEE
T ss_pred EECCcHHHH----------HHHHHHHcCCCcEEEEEE
Confidence 987543321 246889999999999864
No 174
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.16 E-value=9.8e-11 Score=107.32 Aligned_cols=106 Identities=12% Similarity=0.183 Sum_probs=84.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|.++..+++..+..+|+++|+|+..++.|++++... ++. .+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~-~~I~v~~gD~l~~~~~--~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS--GLT-EQIDVRKGNGLAVIEK--KDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCT-TTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEEecchhhccCc--cccccEE
Confidence 4557999999999999999999866779999999999999999998754 332 4899999999887642 2369998
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++. +.... .-.+++....+.|+++|.|++|.
T Consensus 95 via-----gmGg~-lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 95 VIA-----GMGGT-LIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp EEE-----EECHH-HHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEe-----CCchH-HHHHHHHHHHHHhCCCCEEEEEc
Confidence 852 11111 13578889999999999999985
No 175
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.16 E-value=8.1e-11 Score=115.20 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=80.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccc-----ccCCCCCCEEEEEechHhHHhhCCCC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-----AVGFEDPRVTLHIGDGVAFLKAVPEG 199 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~-----~~~~~~~rv~v~~~D~~~~l~~~~~~ 199 (345)
....+|||||||+|.++..+++..+..+|++||+++.++++|++..... ..++...+++++.+|+.+.-....-.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccC
Confidence 4567999999999999999987666668999999999999998753211 01223368999999987643210014
Q ss_pred CccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 200 ~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
.+|+|+++.+-. . .. ....++.+.+.|||||+|++.
T Consensus 252 ~aDVVf~Nn~~F-~--pd--l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 252 NTSVIFVNNFAF-G--PE--VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp TCSEEEECCTTC-C--HH--HHHHHHHHHTTSCTTCEEEES
T ss_pred CccEEEEccccc-C--ch--HHHHHHHHHHcCCCCcEEEEe
Confidence 699999875431 1 11 145678889999999999974
No 176
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.16 E-value=7.6e-11 Score=106.42 Aligned_cols=102 Identities=22% Similarity=0.268 Sum_probs=78.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++... .-++++++.+|+..-+.. ..+||+|
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~fD~I 162 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA----GVKNVHVILGDGSKGFPP--KAPYDVI 162 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc----CCCCcEEEECCcccCCCC--CCCccEE
Confidence 3567999999999999999998754 78999999999999999987653 224599999997332221 3469999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+++...+.. .+.+.+.|+|||++++....
T Consensus 163 i~~~~~~~~----------~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 163 IVTAGAPKI----------PEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EECSBBSSC----------CHHHHHTEEEEEEEEEEECS
T ss_pred EECCcHHHH----------HHHHHHhcCCCcEEEEEEec
Confidence 987553321 24688999999999986543
No 177
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.15 E-value=3.3e-10 Score=105.39 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=81.8
Q ss_pred CCceEEEEeccc---hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH--H-------
Q 019187 126 NPKKVLVIGGGD---GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF--L------- 193 (345)
Q Consensus 126 ~~~~VL~IG~G~---G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~--l------- 193 (345)
...+|||||||+ |.++..+.+..+..+|++||+|+.|++.|++.+.. .++++++.+|+.+. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 457999999999 98876666654457999999999999999998742 36899999998653 2
Q ss_pred hhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 194 KAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 194 ~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
...+.++||+|++...-+..+.. -...+++.++++|+|||.|++..
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCCCCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEEEE
Confidence 12223589999976544332221 13579999999999999998865
No 178
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.15 E-value=4.5e-10 Score=98.52 Aligned_cols=96 Identities=17% Similarity=0.192 Sum_probs=74.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||+|||+|.++..+++. +..+|++||+|+.+++.|++++. +++++.+|+.++ .++||+|
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~-----~~~~D~v 114 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI-----SGKYDTW 114 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC-----CCCEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC-----CCCeeEE
Confidence 35679999999999999999888 45689999999999999999763 689999998764 3689999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
++|.+-..... -....+++.+.+.| |+++++
T Consensus 115 ~~~~p~~~~~~--~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 115 IMNPPFGSVVK--HSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp EECCCC---------CHHHHHHHHHHE--EEEEEE
T ss_pred EECCCchhccC--chhHHHHHHHHHhc--CcEEEE
Confidence 99876433221 12357899999998 555554
No 179
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.15 E-value=5.8e-11 Score=106.35 Aligned_cols=101 Identities=25% Similarity=0.361 Sum_probs=78.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++.. .+|+++|+++.+++.|++.+ ++++++.+|+.++. . .++||+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~~D~v 104 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--L-GRKFSAV 104 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--c-CCCCcEE
Confidence 456899999999999999998874 38999999999999999875 35889999987642 2 5789999
Q ss_pred EEcC-C-CCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDS-S-DPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~-~-~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.. . ........ ...+++.++++|+|||.+++..
T Consensus 105 ~~~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 105 VSMFSSVGYLKTTEE--LGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EECTTGGGGCCSHHH--HHHHHHHHHHTEEEEEEEEECC
T ss_pred EEcCchHhhcCCHHH--HHHHHHHHHHhcCCCeEEEEEe
Confidence 9532 1 11111111 2578999999999999999863
No 180
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.15 E-value=1.4e-10 Score=111.11 Aligned_cols=106 Identities=17% Similarity=0.127 Sum_probs=80.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.+.++|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ .++++++.+|+.++- .+.++||+|
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~--~~~~~~D~I 135 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLN--KL-EDTITLIKGKIEEVH--LPVEKVDVI 135 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTSC--CSCSCEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHc--CC-CCcEEEEEeeHHHhc--CCCCcEEEE
Confidence 35679999999999999999988 356999999997 899999887643 22 258999999987752 235789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEE
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVS 238 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv 238 (345)
+++......... .....+++.+.+.|+|||+++
T Consensus 136 vs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFE-SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EECCCBTTBTTT-CHHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCchhhccCH-HHHHHHHHHHHhhcCCCcEEE
Confidence 987531111101 112468899999999999998
No 181
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.15 E-value=4.4e-11 Score=105.54 Aligned_cols=115 Identities=12% Similarity=0.082 Sum_probs=81.7
Q ss_pred hHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech
Q 019187 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (345)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~ 189 (345)
..|.....++ +.+.+|||||||+|.++..++...+..+|+++|+|+.+++++++++... +..+ ++++ .|.
T Consensus 38 ~fY~~~~~~l-----~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~--g~~~-~v~~--~d~ 107 (200)
T 3fzg_A 38 DFYTYVFGNI-----KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL--KTTI-KYRF--LNK 107 (200)
T ss_dssp HHHHHHHHHS-----CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS--CCSS-EEEE--ECC
T ss_pred HHHHHHHhhc-----CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc--CCCc-cEEE--ecc
Confidence 3466666654 4578999999999999999988755669999999999999999998654 1111 4544 665
Q ss_pred HhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 190 ~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.... +.++||+|+.-..-|.-. .. +.....+.+.|+|||++|..-
T Consensus 108 ~~~~---~~~~~DvVLa~k~LHlL~-~~---~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 108 ESDV---YKGTYDVVFLLKMLPVLK-QQ---DVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHH---TTSEEEEEEEETCHHHHH-HT---TCCHHHHHHTCEEEEEEEEEE
T ss_pred cccC---CCCCcChhhHhhHHHhhh-hh---HHHHHHHHHHhCCCCEEEEeC
Confidence 5442 368899999744322210 00 122347999999999998753
No 182
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.14 E-value=1.4e-09 Score=95.54 Aligned_cols=100 Identities=22% Similarity=0.243 Sum_probs=78.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++... + .+++++.+|+.++ .++||+|+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~--~---~~~~~~~~d~~~~-----~~~~D~v~ 117 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEF--K---GKFKVFIGDVSEF-----NSRVDIVI 117 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGG--T---TSEEEEESCGGGC-----CCCCSEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc--C---CCEEEEECchHHc-----CCCCCEEE
Confidence 56799999999999999998873 458999999999999999988754 1 2799999998764 35899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
+|++...... -....+++.+.+.| ||++++.
T Consensus 118 ~~~p~~~~~~--~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 118 MNPPFGSQRK--HADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp ECCCCSSSST--TTTHHHHHHHHHHC--SEEEEEE
T ss_pred EcCCCccccC--CchHHHHHHHHHhc--CcEEEEE
Confidence 9876433221 12467899999988 7776654
No 183
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.14 E-value=2.1e-10 Score=98.74 Aligned_cols=96 Identities=11% Similarity=0.186 Sum_probs=73.2
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+++|||||||+|.++..+++.. +|++||+|+.+++. .++++++.+|+.+.+. .++||+|+
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~~---~~~fD~i~ 83 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSIN---QESVDVVV 83 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTBC---GGGCSEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhcc---cCCCCEEE
Confidence 45799999999999999999884 99999999999887 1368899999877432 47899999
Q ss_pred EcCCCCCCCcc-----ccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQ-----ELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~-----~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.+-...... ..-..++++.+.+.| |||.+++..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 87653221111 001246888898888 999998854
No 184
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.14 E-value=7.1e-11 Score=99.89 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=83.1
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH-----hh-CC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL-----KA-VP 197 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l-----~~-~~ 197 (345)
....+|||+|||+|..+..+++. .+..+++++|+++ +++. ++++++.+|+.+.- .. .+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEcccccchhhhhhhccCC
Confidence 34579999999999999999887 3447999999999 5421 47899999987652 11 23
Q ss_pred CCCccEEEEcCCCCCCCccccC-------cHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhc
Q 019187 198 EGTYDAVIVDSSDPIGPAQELF-------EKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIF 262 (345)
Q Consensus 198 ~~~yDvIi~D~~~p~~~~~~l~-------t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F 262 (345)
+++||+|+++...........- ...+++.+.++|+|||.+++.... ......+.+.++..|
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~~~~~~ 153 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ----GEGFDEYLREIRSLF 153 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES----STTHHHHHHHHHHHE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec----CCcHHHHHHHHHHhh
Confidence 5789999998764432211000 157899999999999999885422 122344556666667
No 185
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.14 E-value=1.7e-10 Score=105.00 Aligned_cols=106 Identities=19% Similarity=0.099 Sum_probs=74.9
Q ss_pred CCCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHh-hCCCCCc
Q 019187 124 IPNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK-AVPEGTY 201 (345)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~-~~~~~~y 201 (345)
.....+|||||||+|+.+..+++. .+..+|++||+++.+++...+.... .+++.++.+|+..... ....++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhccccce
Confidence 345679999999999999999876 3356999999999876443332221 1479999999875321 1114689
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|++|.+.+.. ..-+.+.+.+.|||||.|++..
T Consensus 148 D~I~~d~a~~~~------~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 148 DVLYVDIAQPDQ------TDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecCCChhH------HHHHHHHHHHhCCCCeEEEEEE
Confidence 999999765321 1234456667999999998753
No 186
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.14 E-value=4.9e-11 Score=108.71 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=80.1
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhccccccc-CCCCCC---------------------
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPR--------------------- 181 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~r--------------------- 181 (345)
.+.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|++++..... ++. .+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT-ARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH-HHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc-ccchhhhhhhhhcccccchhhhh
Confidence 4679999999999999999876 4456899999999999999987643200 000 01
Q ss_pred ----EE-------------EEEechHhHHhh---CCCCCccEEEEcCCCCCCCcc-----ccCcHHHHHHHHhccCCCcE
Q 019187 182 ----VT-------------LHIGDGVAFLKA---VPEGTYDAVIVDSSDPIGPAQ-----ELFEKPFFESVAKALRPGGV 236 (345)
Q Consensus 182 ----v~-------------v~~~D~~~~l~~---~~~~~yDvIi~D~~~p~~~~~-----~l~t~ef~~~v~r~LkpgGv 236 (345)
++ ++.+|..+.+.. ...++||+|+++.+-...... .-....+++.+.++|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 999998776521 014589999988532111100 01124789999999999999
Q ss_pred EEEe
Q 019187 237 VSTQ 240 (345)
Q Consensus 237 lv~~ 240 (345)
+++.
T Consensus 210 l~~~ 213 (250)
T 1o9g_A 210 IAVT 213 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9983
No 187
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.14 E-value=1.5e-10 Score=107.19 Aligned_cols=109 Identities=17% Similarity=0.167 Sum_probs=76.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh-HHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~~yDv 203 (345)
....+|||||||+|.++..+++. ..+|++||+|+.+++.|++++... .++....|... ..... .++||+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~-~~~fD~ 113 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKEL-AGHFDF 113 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGG-TTCCSE
T ss_pred CCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc-------cceeeeeeccccccccc-CCCccE
Confidence 35679999999999999999987 358999999999999999987532 23333333221 01112 578999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhh
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWL 246 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~ 246 (345)
|+++..-....... ...+++.+.++| |||+++++.....+
T Consensus 114 Vv~~~~l~~~~~~~--~~~~l~~l~~lL-PGG~l~lS~~~g~~ 153 (261)
T 3iv6_A 114 VLNDRLINRFTTEE--ARRACLGMLSLV-GSGTVRASVKLGFY 153 (261)
T ss_dssp EEEESCGGGSCHHH--HHHHHHHHHHHH-TTSEEEEEEEBSCC
T ss_pred EEEhhhhHhCCHHH--HHHHHHHHHHhC-cCcEEEEEeccCcc
Confidence 99875432111111 246899999999 99999987644333
No 188
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.12 E-value=1.6e-10 Score=102.49 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=78.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++. + .+++++|+++.+++.+++.+. +++.+|+.++....++++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcCCCCCCCccCEE
Confidence 45689999999999999999988 4 799999999999999987642 5778887654222335789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++...-...+. ...+++.++++|+|||.+++...
T Consensus 98 ~~~~~l~~~~~----~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 98 IFGDVLEHLFD----PWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEESCGGGSSC----HHHHHHHTGGGEEEEEEEEEEEE
T ss_pred EECChhhhcCC----HHHHHHHHHHHcCCCCEEEEEeC
Confidence 97543211111 25899999999999999998653
No 189
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.12 E-value=1e-10 Score=107.02 Aligned_cols=103 Identities=17% Similarity=0.309 Sum_probs=78.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.+.+|||||||+|..+..+++. ..+|+++|+++.+++.|++... .+ ++.+|+.+.. .++++||+|
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~--------~~--~~~~d~~~~~--~~~~~fD~v 118 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV--------KN--VVEAKAEDLP--FPSGAFEAV 118 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC--------SC--EEECCTTSCC--SCTTCEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC--------CC--EEECcHHHCC--CCCCCEEEE
Confidence 36689999999999999999987 3589999999999999998753 12 7788876542 236789999
Q ss_pred EEcCC-CCCCCccccCcHHHHHHHHhccCCCcEEEEeccchh
Q 019187 205 IVDSS-DPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIW 245 (345)
Q Consensus 205 i~D~~-~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~ 245 (345)
++... .+... . ...+++.++++|+|||++++...+.+
T Consensus 119 ~~~~~~~~~~~--~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 119 LALGDVLSYVE--N--KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp EECSSHHHHCS--C--HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred EEcchhhhccc--c--HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 97432 11111 1 36899999999999999998765543
No 190
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.12 E-value=1.1e-10 Score=113.50 Aligned_cols=121 Identities=17% Similarity=0.158 Sum_probs=86.6
Q ss_pred hHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech
Q 019187 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (345)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~ 189 (345)
..|.+++..-.-. -+.+.|||||||+|.++..+++. +..+|++||.++ +++.|++....+ ++. .+++++.+|.
T Consensus 69 ~aY~~Ai~~~~~~--~~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n--~~~-~~i~~i~~~~ 141 (376)
T 4hc4_A 69 DAYRLGILRNWAA--LRGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFN--GLE-DRVHVLPGPV 141 (376)
T ss_dssp HHHHHHHHTTHHH--HTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHT--TCT-TTEEEEESCT
T ss_pred HHHHHHHHhCHHh--cCCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHc--CCC-ceEEEEeeee
Confidence 4566665331111 14679999999999999888887 467999999997 778898876654 343 5899999998
Q ss_pred HhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 190 ~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.+. .. ++++|+||+.........+. ....++....+.|+|||+++-..
T Consensus 142 ~~~--~l-pe~~DvivsE~~~~~l~~e~-~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 142 ETV--EL-PEQVDAIVSEWMGYGLLHES-MLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp TTC--CC-SSCEEEEECCCCBTTBTTTC-SHHHHHHHHHHHEEEEEEEESCE
T ss_pred eee--cC-CccccEEEeecccccccccc-hhhhHHHHHHhhCCCCceECCcc
Confidence 775 23 57899999866543222221 13567788889999999887544
No 191
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.12 E-value=9.6e-11 Score=103.33 Aligned_cols=98 Identities=20% Similarity=0.273 Sum_probs=77.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+.+|||||||+|..+..+ +..+++++|+++.+++.+++.+ ++++++.+|+.+.. .++++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEALP--FPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSCC--SCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccCC--CCCCcEEEEE
Confidence 5679999999999998887 3348999999999999999875 36788899976542 2357899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
+...-...+. ...+++.++++|+|||.+++...
T Consensus 101 ~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 101 LFTTLEFVED----VERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp EESCTTTCSC----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcChhhhcCC----HHHHHHHHHHHcCCCCEEEEEec
Confidence 8654332221 25899999999999999988653
No 192
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.11 E-value=2.9e-10 Score=99.47 Aligned_cols=119 Identities=14% Similarity=0.107 Sum_probs=80.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCC--CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH---------
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSS--VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL--------- 193 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~--~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l--------- 193 (345)
....+|||||||+|..+..+++..+ ..+|+++|+++.. ..++++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------------CCCCceEEEccccchhhhhhccccc
Confidence 3457999999999999999998744 4789999999831 1246888888876542
Q ss_pred --------------hhCCCCCccEEEEcCCCCCCCc--cccC-----cHHHHHHHHhccCCCcEEEEeccchhhhhhHHH
Q 019187 194 --------------KAVPEGTYDAVIVDSSDPIGPA--QELF-----EKPFFESVAKALRPGGVVSTQAESIWLHMHIIE 252 (345)
Q Consensus 194 --------------~~~~~~~yDvIi~D~~~p~~~~--~~l~-----t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~ 252 (345)
...+.++||+|++|...+.... .... ...+++.+.++|+|||.+++.... .....
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~ 161 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL----GSQTN 161 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC----STTHH
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC----CCCHH
Confidence 0023568999999875443211 0000 124788899999999999985321 12234
Q ss_pred HHHHHHHhhc
Q 019187 253 DIVANCRQIF 262 (345)
Q Consensus 253 ~i~~~l~~~F 262 (345)
.+...++..|
T Consensus 162 ~l~~~l~~~f 171 (201)
T 2plw_A 162 NLKTYLKGMF 171 (201)
T ss_dssp HHHHHHHTTE
T ss_pred HHHHHHHHHH
Confidence 5666677667
No 193
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.10 E-value=1.5e-10 Score=107.87 Aligned_cols=111 Identities=12% Similarity=0.092 Sum_probs=74.0
Q ss_pred CCceEEEEeccchHHHHHH----HhcCCCcE--EEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh----
Q 019187 126 NPKKVLVIGGGDGGVLREV----SRHSSVEK--IDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA---- 195 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l----l~~~~~~~--V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~---- 195 (345)
.+.+|||||||+|.++..+ +...+... +++||+++.|++.|++.+... .+..+.++.+..+|+.++...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT-SNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC-SSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc-cCCCcceEEEEecchhhhhhhhccc
Confidence 3569999999999765433 33222334 499999999999999876431 011222344556666655421
Q ss_pred CCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 196 VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 196 ~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.++++||+|++...-.+.+. -..+++.++++|||||.+++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 23678999997544332221 2478999999999999998864
No 194
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.10 E-value=4.7e-11 Score=108.87 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=63.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh-HHhhCC---CCCc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVP---EGTY 201 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~---~~~y 201 (345)
.+.+|||||||+|.++..+++..+..+|++||+++.+++.|++++... ++ ..+++++.+|+.+ ++...+ +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN--NL-SDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--CC-CccEEEEEcchhhhhhhhhhcccCCcc
Confidence 467999999999999999887633468999999999999999987653 22 2479999999766 232222 2589
Q ss_pred cEEEEcCCC
Q 019187 202 DAVIVDSSD 210 (345)
Q Consensus 202 DvIi~D~~~ 210 (345)
|+|+++++-
T Consensus 142 D~i~~npp~ 150 (254)
T 2h00_A 142 DFCMCNPPF 150 (254)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCC
Confidence 999998653
No 195
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.10 E-value=5.3e-11 Score=112.04 Aligned_cols=115 Identities=17% Similarity=0.170 Sum_probs=82.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccC---CCCCCEEEEEechHhHHh--hC--CC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG---FEDPRVTLHIGDGVAFLK--AV--PE 198 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~---~~~~rv~v~~~D~~~~l~--~~--~~ 198 (345)
.+.+|||||||+|..+..+++.+ ..+|+++|+++.+++.|++.+...... ....+++++++|+.+... .. +.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 56799999999999999998764 679999999999999999876542100 012479999999876520 11 14
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++||+|++...-++.....-....+++.++++|+|||++++..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 5899999865433220000012489999999999999999865
No 196
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.10 E-value=2.4e-10 Score=110.20 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=82.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+++|||||||+|..+..+++..+..+++++|+ +.+++.|++++... ++ .++++++.+|..+.-... .+.||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~-p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL--SG-SERIHGHGANLLDRDVPF-PTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC--TT-GGGEEEEECCCCSSSCCC-CCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc--Cc-ccceEEEEccccccCCCC-CCCcCEE
Confidence 3568999999999999999988755679999999 99999999987643 11 258999999976531012 3689999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-+..+... ...+++.++++|+|||.+++..
T Consensus 253 ~~~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFSEEE--VISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSCHHH--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCCHHH--HHHHHHHHHHhcCCCcEEEEEe
Confidence 9854433222111 2478999999999999998743
No 197
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.10 E-value=1.6e-10 Score=110.93 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=80.2
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
+.++|||||||+|.++..++++ +..+|++||+++ +++.|++.+... ++ .++++++.+|..++- . .++||+|+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~--~l-~~~v~~~~~d~~~~~--~-~~~~D~Iv 121 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN--NL-TDRIVVIPGKVEEVS--L-PEQVDIII 121 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTCC--C-SSCEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHc--CC-CCcEEEEEcchhhCC--C-CCceeEEE
Confidence 5679999999999999999987 457999999997 778998876543 22 258999999987652 2 46899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.......... ..+.+..+++.|+|||+++.+.
T Consensus 122 s~~~~~~~~~~~--~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 122 SEPMGYMLFNER--MLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ECCCBTTBTTTS--HHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchhcCChHH--HHHHHHHHHhhcCCCeEEEEec
Confidence 875422111111 2467888999999999998654
No 198
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.10 E-value=3.7e-10 Score=112.58 Aligned_cols=115 Identities=17% Similarity=0.203 Sum_probs=88.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... .-. ++++.+|+.++.... .++||+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~----G~~-v~~~~~Da~~l~~~~-~~~FD~ 173 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW----GAP-LAVTQAPPRALAEAF-GTYFHR 173 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH----CCC-CEEECSCHHHHHHHH-CSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----CCe-EEEEECCHHHhhhhc-cccCCE
Confidence 356799999999999999998763 3468999999999999999988764 223 899999998876433 578999
Q ss_pred EEEcCCCCC-CC----cccc-------------CcHHHHHHHHhccCCCcEEEEeccchh
Q 019187 204 VIVDSSDPI-GP----AQEL-------------FEKPFFESVAKALRPGGVVSTQAESIW 245 (345)
Q Consensus 204 Ii~D~~~p~-~~----~~~l-------------~t~ef~~~v~r~LkpgGvlv~~~~s~~ 245 (345)
|++|++... +. +... ...++++.+.+.|||||+|+..+++..
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 999987421 10 0000 126789999999999999998765543
No 199
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.09 E-value=2.4e-10 Score=112.97 Aligned_cols=108 Identities=13% Similarity=0.164 Sum_probs=79.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHH-------HhcccccccCCCCCCEEEEEechHh---HHh
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVS-------KQFFPDVAVGFEDPRVTLHIGDGVA---FLK 194 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~a-------r~~~~~~~~~~~~~rv~v~~~D~~~---~l~ 194 (345)
....+|||||||+|.++..+++..+..+|++||+++.+++.| ++++... ++.-.+++++.+|... .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~--Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLY--GMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHT--TBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHc--CCCCCceEEEEcCccccccccc
Confidence 356799999999999999999864556899999999999999 7766543 2113589999987542 121
Q ss_pred hCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 195 AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 195 ~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
.. .++||+|+++... .. .. -...++.+.+.|+|||.+++.
T Consensus 319 ~~-~~~FDvIvvn~~l-~~--~d--~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 EL-IPQCDVILVNNFL-FD--ED--LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HH-GGGCSEEEECCTT-CC--HH--HHHHHHHHHTTCCTTCEEEES
T ss_pred cc-cCCCCEEEEeCcc-cc--cc--HHHHHHHHHHhCCCCeEEEEe
Confidence 11 3679999986432 11 11 135788999999999999985
No 200
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.09 E-value=1.7e-10 Score=112.74 Aligned_cols=104 Identities=26% Similarity=0.274 Sum_probs=86.6
Q ss_pred CCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCC-EEEEEechHhHHh-hCCCCCcc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPR-VTLHIGDGVAFLK-AVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~r-v~v~~~D~~~~l~-~~~~~~yD 202 (345)
...+|||++||+|..+.++++. .+..+|++||+++..++.+++++..+ ++.+ + ++++.+|+.+++. .. .++||
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N--gl~~-~~v~v~~~Da~~~l~~~~-~~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN--NIPE-DRYEIHGMEANFFLRKEW-GFGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT--TCCG-GGEEEECSCHHHHHHSCC-SSCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh--CCCC-ceEEEEeCCHHHHHHHhh-CCCCc
Confidence 3579999999999999999886 34578999999999999999998765 3332 4 9999999999987 65 57899
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|++|++. . ..++++.+.+.|++||++++.+
T Consensus 128 ~V~lDP~g---~-----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDPFG---T-----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECCSS---C-----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCc---C-----HHHHHHHHHHHhCCCCEEEEEe
Confidence 99999731 1 2479999999999999998855
No 201
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.09 E-value=3.1e-10 Score=110.48 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=85.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccccc-------------CCCCCCEEEEEechHhH
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-------------GFEDPRVTLHIGDGVAF 192 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~-------------~~~~~rv~v~~~D~~~~ 192 (345)
.+.+|||+|||+|..+..+++..+..+|+++|+|+..++.+++++..+.. ++. +++++.+|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~--~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK--TIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS--EEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC--ceEEEcCcHHHH
Confidence 56799999999999999999874456899999999999999998865410 222 399999999999
Q ss_pred HhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 193 LKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 193 l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+... .++||+|++|++. . ..+|++.+.+.|++||++++.+
T Consensus 125 ~~~~-~~~fD~I~lDP~~---~-----~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAER-HRYFHFIDLDPFG---S-----PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHS-TTCEEEEEECCSS---C-----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhc-cCCCCEEEeCCCC---C-----HHHHHHHHHHhcCCCCEEEEEe
Confidence 8765 5689999988642 1 2589999999999999988754
No 202
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.08 E-value=1.8e-10 Score=102.25 Aligned_cols=110 Identities=15% Similarity=0.059 Sum_probs=75.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHH----HhcccccccCCCCCCEEEEEechHhHHhhCCCCC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVS----KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT 200 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~a----r~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 200 (345)
....+|||||||+|..+..+++..+..+|++||+++.+++.+ ++..... .-++++++.+|+.+.- .+.+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~----~~~~v~~~~~d~~~l~--~~~~~ 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKG----GLPNLLYLWATAERLP--PLSGV 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGT----CCTTEEEEECCSTTCC--SCCCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhc----CCCceEEEecchhhCC--CCCCC
Confidence 356799999999999999999986678999999999987753 3322221 2358999999987742 22444
Q ss_pred ccEEEEcCCCCCCC-ccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGP-AQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~-~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|.|++..+..... ...--...+++.++++|||||++++..
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred -CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 7777443211000 000001478999999999999999854
No 203
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.08 E-value=3.1e-10 Score=108.08 Aligned_cols=106 Identities=18% Similarity=0.231 Sum_probs=80.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
+.++|||||||+|.++..+++. +..+|++||++ .+++.|++.+... ++ ..+++++.+|+.++. .+.++||+|+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~--~~~~~~D~Iv 110 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELN--GF-SDKITLLRGKLEDVH--LPFPKVDIII 110 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHT--TC-TTTEEEEESCTTTSC--CSSSCEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHc--CC-CCCEEEEECchhhcc--CCCCcccEEE
Confidence 4679999999999999999987 45699999999 5899999887643 22 358999999987752 2347899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
++......... .....++..+.+.|+|||+++.
T Consensus 111 s~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYE-SMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTT-CCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccH-HHHHHHHHHHHhhcCCCeEEEE
Confidence 87542211111 1124688999999999999974
No 204
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.07 E-value=1.8e-10 Score=105.59 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=76.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++.. +++++.+|+.++- .++++||+|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~d~~~~~--~~~~~fD~v 98 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVHP----------QVEWFTGYAENLA--LPDKSVDGV 98 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCCT----------TEEEECCCTTSCC--SCTTCBSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcc----------CCEEEECchhhCC--CCCCCEeEE
Confidence 46789999999999999999984 469999999999998776532 7899999986642 236889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-.... . ...+++.++++|| ||.+++..
T Consensus 99 ~~~~~l~~~~--~--~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 99 ISILAIHHFS--H--LEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEESCGGGCS--S--HHHHHHHHHHHBC-SSCEEEEE
T ss_pred EEcchHhhcc--C--HHHHHHHHHHHhC-CcEEEEEE
Confidence 9865422111 1 2589999999999 99666654
No 205
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.06 E-value=3.9e-10 Score=105.98 Aligned_cols=128 Identities=17% Similarity=0.109 Sum_probs=85.6
Q ss_pred eEEEEcCeE-eeeccchhHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccc
Q 019187 94 KVLILDGVI-QLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD 172 (345)
Q Consensus 94 ~~L~lDg~~-q~~~~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~ 172 (345)
..+.++|.. ..-++..+...+++..+.+ ....++|||||||+|.++..++++ +..+|++||+++.|++.+.+.
T Consensus 54 d~I~v~g~~~~yvsrg~~Kl~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~--- 127 (291)
T 3hp7_A 54 TELKLKGEKLRYVSRGGLKLEKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ--- 127 (291)
T ss_dssp CCEEETTCCCCSSSTTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT---
T ss_pred CEEEEcccccccccchHHHHHHHHHhcCC--CccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh---
Confidence 345566643 2334444455566665433 234679999999999999999888 467999999999999885442
Q ss_pred cccCCCCCCEEEEE-echHhHH-hhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 173 VAVGFEDPRVTLHI-GDGVAFL-KAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 173 ~~~~~~~~rv~v~~-~D~~~~l-~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++++.... .|++..- ...+...||+|++|..... ...++..++++|+|||.+++-
T Consensus 128 ------~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s-------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 128 ------DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS-------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ------CTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred ------CcccceecccCceecchhhCCCCCCCEEEEEeeHhh-------HHHHHHHHHHHcCcCCEEEEE
Confidence 24444332 2333221 1222345999999876431 146899999999999998874
No 206
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.06 E-value=6.3e-10 Score=110.73 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=88.8
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|+.+.++++. .+..+|+++|+|+..++.+++++... + -.++.++.+|+.++.... .++||+
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~--g--~~nv~v~~~Da~~l~~~~-~~~FD~ 178 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW--G--VSNAIVTNHAPAELVPHF-SGFFDR 178 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH--T--CSSEEEECCCHHHHHHHH-TTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc--C--CCceEEEeCCHHHhhhhc-cccCCE
Confidence 34679999999999999999876 44468999999999999999988765 2 246999999998876433 578999
Q ss_pred EEEcCCCCC-CC---ccc--------------cCcHHHHHHHHhccCCCcEEEEeccchh
Q 019187 204 VIVDSSDPI-GP---AQE--------------LFEKPFFESVAKALRPGGVVSTQAESIW 245 (345)
Q Consensus 204 Ii~D~~~p~-~~---~~~--------------l~t~ef~~~v~r~LkpgGvlv~~~~s~~ 245 (345)
|++|++... +. .+. -...++++.+.+.|+|||+|+..+++..
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 999986321 10 000 0123789999999999999998765543
No 207
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.05 E-value=5.4e-10 Score=111.04 Aligned_cols=117 Identities=22% Similarity=0.312 Sum_probs=87.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSV-EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~-~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+|||+|||+|+.+..+++..+. .+|+++|+++..++.+++++... .-++++++.+|+..+....++++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM----GIKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT----TCCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc----CCCcEEEEEcChhhcchhhccCCCCE
Confidence 34569999999999999999886433 68999999999999999987654 22479999999877643232378999
Q ss_pred EEEcCCCCC-CC---ccc------------c--CcHHHHHHHHhccCCCcEEEEeccchh
Q 019187 204 VIVDSSDPI-GP---AQE------------L--FEKPFFESVAKALRPGGVVSTQAESIW 245 (345)
Q Consensus 204 Ii~D~~~p~-~~---~~~------------l--~t~ef~~~v~r~LkpgGvlv~~~~s~~ 245 (345)
|++|++... +. .+. + ....+++.+.+.|+|||+++..+.+..
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 999976421 11 000 0 015789999999999999998765543
No 208
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.04 E-value=5.1e-11 Score=108.40 Aligned_cols=115 Identities=11% Similarity=0.070 Sum_probs=79.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC-------------------------CC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-------------------------DP 180 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-------------------------~~ 180 (345)
.+++|||||||+|..+..+++... .+|+++|+++.+++.|++.+......++ ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 457999999999999998887743 5899999999999999988754200000 01
Q ss_pred CE-EEEEechHhHHh--hCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 181 RV-TLHIGDGVAFLK--AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 181 rv-~v~~~D~~~~l~--~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++ +++.+|+.+... ....++||+|++...-...+...--...+++.++++|+|||++++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 27 899999876432 11127899999754321000000012578999999999999998754
No 209
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.04 E-value=7.9e-10 Score=110.80 Aligned_cols=127 Identities=20% Similarity=0.257 Sum_probs=92.9
Q ss_pred CCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
...+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... .-.+++++.+|+..+.... .++||+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~----g~~nv~~~~~D~~~~~~~~-~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC----GISNVALTHFDGRVFGAAV-PEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH----TCCSEEEECCCSTTHHHHS-TTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----CCCcEEEEeCCHHHhhhhc-cccCCEE
Confidence 45799999999999999998863 3468999999999999999988654 2247999999998875433 5789999
Q ss_pred EEcCCCCC-CC----ccc--cC-----------cHHHHHHHHhccCCCcEEEEeccchhh--hhhHHHHHHHH
Q 019187 205 IVDSSDPI-GP----AQE--LF-----------EKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVAN 257 (345)
Q Consensus 205 i~D~~~p~-~~----~~~--l~-----------t~ef~~~v~r~LkpgGvlv~~~~s~~~--~~~~~~~i~~~ 257 (345)
++|++... +. +.. .+ ..++++.+.++|||||+|+..+.+... +.+.+..+++.
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~ 264 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKET 264 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHH
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHH
Confidence 99976421 11 000 01 246889999999999999987655432 23344444443
No 210
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.04 E-value=5.4e-10 Score=102.52 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=78.2
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHH------HHHHHHhcccccccCCCCCCEEEEEec-hHhHHhhC
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKM------VVDVSKQFFPDVAVGFEDPRVTLHIGD-GVAFLKAV 196 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~------vi~~ar~~~~~~~~~~~~~rv~v~~~D-~~~~l~~~ 196 (345)
....+|||||||+|..+..+++. .+..+|+++|+++. +++.|++++... ++ .++++++.+| ........
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG--PL-GDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS--TT-GGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc--CC-CCceEEEECChhhhccCCC
Confidence 45679999999999999999887 34469999999997 899999887643 11 2589999998 22111112
Q ss_pred CCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 197 ~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++++||+|++...-...+. ...+.+.++++++|||.+++..
T Consensus 119 ~~~~fD~v~~~~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFAS----ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGSSC----HHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhCCC----HHHHHHHHHHHhCCCCEEEEEE
Confidence 3578999997543322111 1346777777777899998864
No 211
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.04 E-value=3.5e-10 Score=103.66 Aligned_cols=96 Identities=21% Similarity=0.285 Sum_probs=76.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.|++.. +++.++.+|+.+.- .++++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRLP--FSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSCS--BCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhCC--CCCCceeEE
Confidence 3567999999999999999998744568999999999999999864 35788999976532 235789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
++... ..+++.+.++|+|||.+++...
T Consensus 153 ~~~~~-----------~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 153 IRIYA-----------PCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp EEESC-----------CCCHHHHHHHEEEEEEEEEEEE
T ss_pred EEeCC-----------hhhHHHHHHhcCCCcEEEEEEc
Confidence 96432 1358999999999999988653
No 212
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.03 E-value=3.5e-11 Score=110.81 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=75.9
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC-------------------------CC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-------------------------DP 180 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-------------------------~~ 180 (345)
...+|||||||+|..+..+++. +..+|+++|+++.+++.|++++.....+++ ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4578999999999777665554 356899999999999999987643211111 01
Q ss_pred CEE-EEEechHhHHh--hCCCCCccEEEEcCCCCC-CCc-cccCcHHHHHHHHhccCCCcEEEEec
Q 019187 181 RVT-LHIGDGVAFLK--AVPEGTYDAVIVDSSDPI-GPA-QELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 181 rv~-v~~~D~~~~l~--~~~~~~yDvIi~D~~~p~-~~~-~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+++ ++.+|..+... ....++||+|++...-.. .+. .. -...+++++++|||||.|++..
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~--~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDA--YRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHH--HHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHH--HHHHHHHHHHHcCCCcEEEEEE
Confidence 243 88888766311 112468999997543221 111 11 1468899999999999998864
No 213
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.03 E-value=4.8e-10 Score=97.53 Aligned_cols=119 Identities=13% Similarity=0.084 Sum_probs=79.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCC---------cEEEEEECCHHHHHHHHhcccccccCCCCCCEEEE-EechHhHHh
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSV---------EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH-IGDGVAFLK 194 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~---------~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~-~~D~~~~l~ 194 (345)
....+|||||||+|.++..+++..+. .+|+++|+++.. ..++++++ .+|......
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 34679999999999999999987433 689999999831 11367788 888654311
Q ss_pred ------hCCCCCccEEEEcCCCCCCCccccC-------cHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh
Q 019187 195 ------AVPEGTYDAVIVDSSDPIGPAQELF-------EKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (345)
Q Consensus 195 ------~~~~~~yDvIi~D~~~p~~~~~~l~-------t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~ 261 (345)
..+.++||+|++|...........- ...+++.+.++|+|||.+++..... .....+.+.++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~----~~~~~~~~~l~~~ 161 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG----SQSRRLQRRLTEE 161 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS----GGGHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC----ccHHHHHHHHHHH
Confidence 1224589999998643321110000 1368899999999999999864221 2234555666667
Q ss_pred c
Q 019187 262 F 262 (345)
Q Consensus 262 F 262 (345)
|
T Consensus 162 f 162 (196)
T 2nyu_A 162 F 162 (196)
T ss_dssp E
T ss_pred h
Confidence 7
No 214
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.02 E-value=3e-09 Score=102.98 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=78.7
Q ss_pred CceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCC--------
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE-------- 198 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~-------- 198 (345)
+++|||+|||+|.++..+++. ..+|++||+++.+++.|++++..+ ++ .+++++.+|+.+++.....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~n--g~--~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAAN--HI--DNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHT--TC--CSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHc--CC--CceEEEECCHHHHHHHHhhcccccccc
Confidence 578999999999999998885 468999999999999999988654 22 4799999999988754322
Q ss_pred ------CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 199 ------GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 199 ------~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
.+||+|++|++.. + ..+.+.+.|+++|.++..+.++
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~-g---------~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRS-G---------LDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GSCGGGCCEEEEEECCCTT-C---------CCHHHHHHHTTSSEEEEEESCH
T ss_pred ccccccCCCCEEEECcCcc-c---------cHHHHHHHHhCCCEEEEEECCH
Confidence 3799999997542 1 1234555667888888766554
No 215
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.02 E-value=4e-10 Score=107.60 Aligned_cols=108 Identities=19% Similarity=0.255 Sum_probs=82.2
Q ss_pred CceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... +. .++++++.+|..+..... .+.||+|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~-~~~~D~v~~ 254 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--DL-GGRVEFFEKNLLDARNFE-GGAADVVML 254 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TC-GGGEEEEECCTTCGGGGT-TCCEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc--CC-CCceEEEeCCcccCcccC-CCCccEEEE
Confidence 78999999999999999998766679999999 88999999887643 11 248999999977653112 466999998
Q ss_pred cCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 207 D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
...-+..+... ...+++.++++|+|||.+++..
T Consensus 255 ~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 255 NDCLHYFDARE--AREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp ESCGGGSCHHH--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ecccccCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 54332222111 2579999999999999998753
No 216
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.02 E-value=9e-10 Score=108.73 Aligned_cols=116 Identities=16% Similarity=0.293 Sum_probs=87.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||+|||+|+.+..+++..+..+|+++|+++..++.+++++... + .+++++.+|+.++....+.++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~--g---~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--G---MKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT--T---CCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc--C---CCeEEEeCchhhchhhcccCCCCEE
Confidence 3457999999999999999998754479999999999999999987654 1 2478999998776532335789999
Q ss_pred EEcCCCCC-CC---ccc---------c-----CcHHHHHHHHhccCCCcEEEEeccchh
Q 019187 205 IVDSSDPI-GP---AQE---------L-----FEKPFFESVAKALRPGGVVSTQAESIW 245 (345)
Q Consensus 205 i~D~~~p~-~~---~~~---------l-----~t~ef~~~v~r~LkpgGvlv~~~~s~~ 245 (345)
++|++... +. .+. + ...++++.+.+.|+|||+++..+.+..
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 99976422 10 000 0 114789999999999999998765543
No 217
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.02 E-value=6.7e-10 Score=105.40 Aligned_cols=106 Identities=17% Similarity=0.224 Sum_probs=81.2
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|..+..+++..+..+++++|+ +.+++.|++++... ++ .++++++.+|..+ .. ...||+|+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~---~~-p~~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT--GL-SGRAQVVVGSFFD---PL-PAGAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TC-TTTEEEEECCTTS---CC-CCSCSEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--Cc-CcCeEEecCCCCC---CC-CCCCcEEE
Confidence 467999999999999999988756678999999 99999999987643 22 3689999999753 22 23899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+...-+..+... ...++++++++|+|||.+++..
T Consensus 241 ~~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 241 LSAVLHDWDDLS--AVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHHTTTCEEEEEE
T ss_pred EehhhccCCHHH--HHHHHHHHHHhcCCCCEEEEEe
Confidence 754332222111 2579999999999999998854
No 218
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.01 E-value=1.1e-09 Score=105.88 Aligned_cols=107 Identities=15% Similarity=0.210 Sum_probs=81.8
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+..+++++|+ +.+++.|++++... ++ .++++++.+|..+ .. ...||+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~l-~~~v~~~~~d~~~---~~-p~~~D~v 272 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR--GL-ADRCEILPGDFFE---TI-PDGADVY 272 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TC-TTTEEEEECCTTT---CC-CSSCSEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc--Cc-CCceEEeccCCCC---CC-CCCceEE
Confidence 4568999999999999999998766679999999 99999999987643 22 3589999999763 23 2389999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-+..+... ...+++.++++|+|||.+++..
T Consensus 273 ~~~~vlh~~~d~~--~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 273 LIKHVLHDWDDDD--VVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHTTCCTTCEEEEEE
T ss_pred EhhhhhccCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 9754332222111 1368999999999999998854
No 219
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.99 E-value=5.5e-09 Score=103.24 Aligned_cols=102 Identities=16% Similarity=0.098 Sum_probs=79.6
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh--CCCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA--VPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~~yDv 203 (345)
...+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++... .-.+++++.+|+.+++.. ...++||+
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~----~~~~v~f~~~d~~~~l~~~~~~~~~fD~ 359 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLN----GLQNVTFYHENLEEDVTKQPWAKNGFDK 359 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCTTSCCSSSGGGTTCCSE
T ss_pred CCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEECCHHHHhhhhhhhcCCCCE
Confidence 4579999999999999999988 579999999999999999987653 224899999999886543 12468999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|++|++.... .++++.+.+ ++|++++.+.+
T Consensus 360 Vv~dPPr~g~-------~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 360 VLLDPARAGA-------AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp EEECCCTTCC-------HHHHHHHHH-HCCSEEEEEES
T ss_pred EEECCCCccH-------HHHHHHHHh-cCCCeEEEEEC
Confidence 9998654211 256666654 78999888754
No 220
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.98 E-value=2.2e-09 Score=105.98 Aligned_cols=99 Identities=12% Similarity=0.183 Sum_probs=78.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||+|||+|.++..+++. ..+|++||+++.+++.|++++... ++ . ++++.+|+.+++. .+||+|
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~n--gl--~-v~~~~~d~~~~~~----~~fD~V 357 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEIN--NV--D-AEFEVASDREVSV----KGFDTV 357 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH--TC--C-EEEEECCTTTCCC----TTCSEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc--CC--c-EEEEECChHHcCc----cCCCEE
Confidence 35679999999999999999987 468999999999999999987654 22 3 9999999888753 279999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++|++... ....+++.+. .|+|+|++++.+
T Consensus 358 v~dPPr~g------~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 358 IVDPPRAG------LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp EECCCTTC------SCHHHHHHHH-HHCCSEEEEEES
T ss_pred EEcCCccc------hHHHHHHHHH-hcCCCcEEEEEC
Confidence 99876321 1245677665 499999999865
No 221
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.98 E-value=1.4e-10 Score=107.82 Aligned_cols=114 Identities=12% Similarity=0.052 Sum_probs=74.2
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC------------C--------------
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE------------D-------------- 179 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~------------~-------------- 179 (345)
.+.+|||||||+|.....+++.. ..+|+++|+++.+++.|++++......++ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56799999999999544444433 45999999999999999986543100000 0
Q ss_pred CCEEEEEechHhHHh----hCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 180 PRVTLHIGDGVAFLK----AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 180 ~rv~v~~~D~~~~l~----~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
..++++.+|+.+.+. ..++++||+|++...-.......---..+++.++++|||||.|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 125677778766332 1224679999976432211000000257899999999999999885
No 222
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.97 E-value=1.4e-09 Score=101.17 Aligned_cols=109 Identities=14% Similarity=0.099 Sum_probs=75.0
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEEC-CHHHHHHHHhcccccc---cCCC---CCCEEEEEech----HhHHh
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEI-DKMVVDVSKQFFPDVA---VGFE---DPRVTLHIGDG----VAFLK 194 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEi-d~~vi~~ar~~~~~~~---~~~~---~~rv~v~~~D~----~~~l~ 194 (345)
..++|||||||+|.++..+++.. ..+|+++|+ ++.+++.|+++...+. .++. .++++++..|. .....
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 45799999999999999988873 458999999 8999999999873210 0111 13688875442 22221
Q ss_pred hCCCCCccEEEE-cCCCCCCCccccCcHHHHHHHHhccC---C--CcEEEEe
Q 019187 195 AVPEGTYDAVIV-DSSDPIGPAQELFEKPFFESVAKALR---P--GGVVSTQ 240 (345)
Q Consensus 195 ~~~~~~yDvIi~-D~~~p~~~~~~l~t~ef~~~v~r~Lk---p--gGvlv~~ 240 (345)
..+.++||+|++ |.... ... ...+++.+.++|+ | ||++++.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~---~~~--~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSF---HQA--HDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHSCSSBSEEEEESCCSC---GGG--HHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hccCCCCCEEEEeCcccC---hHH--HHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 112578999996 54322 111 3578999999999 9 9976653
No 223
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.97 E-value=4.5e-10 Score=109.67 Aligned_cols=120 Identities=20% Similarity=0.287 Sum_probs=85.3
Q ss_pred CCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.+.+|||+|||+|.++..++++. ...+|++||+|+.+++.| .+++++.+|...+. ..++||+|
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~---~~~~fD~I 102 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE---PGEAFDLI 102 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC---CSSCEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC---ccCCCCEE
Confidence 45699999999999999998763 356999999999988765 36899999987753 24789999
Q ss_pred EEcCCCCCCCc---------cc---c-------------CcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHH
Q 019187 205 IVDSSDPIGPA---------QE---L-------------FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCR 259 (345)
Q Consensus 205 i~D~~~p~~~~---------~~---l-------------~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~ 259 (345)
+++++-..... .. . ....|++.+.+.|+|||.+++.....+........+.+.+.
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~ 182 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLA 182 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHH
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHH
Confidence 98865321110 00 0 01278999999999999998876555544333344444444
Q ss_pred hh
Q 019187 260 QI 261 (345)
Q Consensus 260 ~~ 261 (345)
+.
T Consensus 183 ~~ 184 (421)
T 2ih2_A 183 RE 184 (421)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 224
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.97 E-value=8.4e-10 Score=106.15 Aligned_cols=107 Identities=23% Similarity=0.347 Sum_probs=80.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+..+++++|+ +.+++.|++++... ++ ..+++++.+|..+. . ...||+|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~---~-~~~~D~v 252 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA--GL-ADRVTVAEGDFFKP---L-PVTADVV 252 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TC-TTTEEEEECCTTSC---C-SCCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--CC-CCceEEEeCCCCCc---C-CCCCCEE
Confidence 3567999999999999999998755679999999 99999999987543 22 24899999997653 2 2349999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-+..+... ...+++.++++|+|||.+++..
T Consensus 253 ~~~~vl~~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 253 LLSFVLLNWSDED--ALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeccccCCCHHH--HHHHHHHHHHhcCCCcEEEEEe
Confidence 9854332111110 1379999999999999887643
No 225
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.97 E-value=1.4e-09 Score=102.98 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=80.3
Q ss_pred ceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEc
Q 019187 128 KKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVD 207 (345)
Q Consensus 128 ~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D 207 (345)
.+|||||||+|..+..+++..+..+++++|+ +.+++.|++.+... ++ .++++++.+|..+. . .+.||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~---~-~~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL--LA-GERVSLVGGDMLQE---V-PSNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH--HH-TTSEEEEESCTTTC---C-CSSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc--CC-CCcEEEecCCCCCC---C-CCCCCEEEEc
Confidence 8999999999999999988755679999999 99999999987542 11 35899999997652 3 3679999975
Q ss_pred CCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 208 SSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 208 ~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
..-+..+... ...+++.++++|+|||.+++..
T Consensus 241 ~vl~~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 241 RIIGDLDEAA--SLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp SCGGGCCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhccCCCHHH--HHHHHHHHHHhcCCCCEEEEEE
Confidence 4432112111 2478999999999999988763
No 226
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.97 E-value=3.1e-09 Score=94.61 Aligned_cols=101 Identities=14% Similarity=0.039 Sum_probs=77.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC-CCCEEEEEechHhH------------
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-DPRVTLHIGDGVAF------------ 192 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-~~rv~v~~~D~~~~------------ 192 (345)
++++||++|+| ..+..+++.+ ..+|+.||.|++..+.|++++... ++. ..+++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~--g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAAN--PPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHS--CCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHc--CCCCCCceEEEEeCchhhhcccccccchhh
Confidence 57899999984 6788888864 579999999999999999998764 320 35899999996432
Q ss_pred ------Hh---hC-CCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 193 ------LK---AV-PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 193 ------l~---~~-~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
.. .. ..++||+|++|... ...++..+.+.|+|||++++.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEET
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEEe
Confidence 21 12 13789999999742 136777788999999999874
No 227
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.96 E-value=7.8e-10 Score=107.93 Aligned_cols=109 Identities=24% Similarity=0.298 Sum_probs=75.7
Q ss_pred HHHHHHHhcccccCCCCceEEEEecc------chHHHHHHH-hcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEE
Q 019187 111 AYQEMITHLPLCSIPNPKKVLVIGGG------DGGVLREVS-RHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVT 183 (345)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G------~G~~~~~ll-~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~ 183 (345)
.|.+.+..+ ..++.+||||||| +|+.+..++ ++.+..+|++||+++.+. . ..++++
T Consensus 205 ~Ye~lL~~l----~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-------~~~rI~ 267 (419)
T 3sso_A 205 HYDRHFRDY----RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-------DELRIR 267 (419)
T ss_dssp HHHHHHGGG----TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-------CBTTEE
T ss_pred HHHHHHHhh----cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-------cCCCcE
Confidence 455555432 2467899999999 555555554 444567999999999862 1 236899
Q ss_pred EEEechHh--HHhhC--CCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 184 LHIGDGVA--FLKAV--PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 184 v~~~D~~~--~l~~~--~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++++|+.+ |.... ..++||+|++|.... ... ...+|+.++++|||||++++..
T Consensus 268 fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH~---~~d--~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 268 TIQGDQNDAEFLDRIARRYGPFDIVIDDGSHI---NAH--VRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp EEECCTTCHHHHHHHHHHHCCEEEEEECSCCC---HHH--HHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEecccccchhhhhhcccCCccEEEECCccc---chh--HHHHHHHHHHhcCCCeEEEEEe
Confidence 99999865 33111 147899999886421 111 2578999999999999999854
No 228
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.96 E-value=2.5e-09 Score=102.58 Aligned_cols=107 Identities=19% Similarity=0.163 Sum_probs=80.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..+++..+..+++++|+ +.+++.|++++... ++ ..+++++.+|..+. . ...+|+|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~--~~~~D~v 260 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK--GV-ADRMRGIAVDIYKE--S--YPEADAV 260 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TC-TTTEEEEECCTTTS--C--CCCCSEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc--CC-CCCEEEEeCccccC--C--CCCCCEE
Confidence 4568999999999999999998765679999999 99999999987643 22 34799999997654 1 2334999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-+..+.. ....+++.++++|+|||.+++..
T Consensus 261 ~~~~vlh~~~d~--~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 261 LFCRILYSANEQ--LSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEechhccCCHH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 975433222211 12578999999999999996643
No 229
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.96 E-value=7e-10 Score=104.88 Aligned_cols=108 Identities=20% Similarity=0.163 Sum_probs=80.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+..+++++|++ .+++.|++.+... ++ ..+++++.+|..+. .. .+.||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~-~~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ--GV-ASRYHTIAGSAFEV--DY-GNDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--TC-GGGEEEEESCTTTS--CC-CSCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--CC-CcceEEEecccccC--CC-CCCCcEE
Confidence 45689999999999999999987556799999999 9999999987543 11 24799999997653 22 3459999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+... ...+++.++++|+|||.+++..
T Consensus 237 ~~~~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 237 LLPNFLHHFDVAT--CEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhccCCHHH--HHHHHHHHHHhCCCCcEEEEEe
Confidence 9843222111111 2579999999999999777643
No 230
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.95 E-value=6.8e-10 Score=111.32 Aligned_cols=106 Identities=16% Similarity=0.167 Sum_probs=79.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
++++|||||||+|.++..++++ +..+|++||+++ +++.|++.+... ++ ..+++++.+|+.++ .. .++||+|+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~--gl-~~~v~~~~~d~~~~--~~-~~~fD~Iv 229 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN--NL-TDRIVVIPGKVEEV--SL-PEQVDIII 229 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHT--TC-TTTEEEEESCTTTC--CC-SSCEEEEE
T ss_pred CCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHc--CC-CCcEEEEECchhhC--cc-CCCeEEEE
Confidence 4679999999999999999886 456999999999 889999877643 22 25899999998764 12 46899999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++.......... ..+.+..+++.|+|||+++...
T Consensus 230 s~~~~~~~~~e~--~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 230 SEPMGYMLFNER--MLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCCHHHHTCHH--HHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchHhcCcHH--HHHHHHHHHHhcCCCCEEEEEe
Confidence 764311000011 1456778899999999998654
No 231
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.95 E-value=1e-09 Score=105.10 Aligned_cols=128 Identities=16% Similarity=0.141 Sum_probs=90.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCCC-----cEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSV-----EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~-----~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 200 (345)
...+|||+|||+|+++..++++.+. .+++++|+|+.+++.|+.++... + .+++++.+|..... ..++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--g---~~~~i~~~D~l~~~---~~~~ 201 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--R---QKMTLLHQDGLANL---LVDP 201 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH--T---CCCEEEESCTTSCC---CCCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC--C---CCceEEECCCCCcc---ccCC
Confidence 4579999999999999998876321 68999999999999999987543 1 25889999976532 2578
Q ss_pred ccEEEEcCCCCCCCcc------------c--cCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh
Q 019187 201 YDAVIVDSSDPIGPAQ------------E--LFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~------------~--l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~ 261 (345)
||+|+++++-...+.. . .....|++.+.+.|+|||++++...+.+........+.+.+.+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 9999998763111100 0 01236899999999999998887655455444444555555443
No 232
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.94 E-value=6.1e-10 Score=103.90 Aligned_cols=126 Identities=10% Similarity=0.059 Sum_probs=82.8
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEE--EechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH--IGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~yD 202 (345)
....+|||||||+|+.+..+++. .+|++||+++ ++..+++. +.....+ ..++.++ .+|+.++ ++++||
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-~~~~~~~-~~~v~~~~~~~D~~~l----~~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-PRLVETF-GWNLITFKSKVDVTKM----EPFQAD 150 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-CCCCCCT-TGGGEEEECSCCGGGC----CCCCCS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-hhhhhhc-CCCeEEEeccCcHhhC----CCCCcC
Confidence 34579999999999999999988 4799999999 43333221 1100011 1268888 8897663 357899
Q ss_pred EEEEcCCCCCCCccc---cCcHHHHHHHHhccCCCc--EEEEeccchhhhhhHHHHHHHHHHhhcC
Q 019187 203 AVIVDSSDPIGPAQE---LFEKPFFESVAKALRPGG--VVSTQAESIWLHMHIIEDIVANCRQIFK 263 (345)
Q Consensus 203 vIi~D~~~p~~~~~~---l~t~ef~~~v~r~LkpgG--vlv~~~~s~~~~~~~~~~i~~~l~~~F~ 263 (345)
+|++|.. ....... .-+..+++.+.++|+||| .|++..-.+.. ..+..+++.++..|.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~--~~~~~~l~~l~~~f~ 213 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYS--CDVLEALMKMQARFG 213 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCS--HHHHHHHHHHHHHHC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCc--hhHHHHHHHHHHHcC
Confidence 9999976 3322110 001137888999999999 88885433221 223456677888883
No 233
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.94 E-value=9.8e-10 Score=97.81 Aligned_cols=92 Identities=12% Similarity=0.166 Sum_probs=72.6
Q ss_pred CceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
+.+|||||||+|..+..+++. +++|+++.+++.+++. +++++.+|+.+.. .+.++||+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~~--~~~~~fD~v~~ 108 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENLP--LKDESFDFALM 108 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBCC--SCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccCC--CCCCCeeEEEE
Confidence 689999999999999988765 8999999999999875 4678889976542 23578999998
Q ss_pred cCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 207 D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
...-...+ . ...+++.+.++|+|||.+++..
T Consensus 109 ~~~l~~~~--~--~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 109 VTTICFVD--D--PERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp ESCGGGSS--C--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchHhhcc--C--HHHHHHHHHHHcCCCcEEEEEE
Confidence 64322111 1 2579999999999999998864
No 234
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.94 E-value=4.3e-09 Score=110.36 Aligned_cols=111 Identities=14% Similarity=0.080 Sum_probs=80.8
Q ss_pred CCceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhccccccc--CCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAV--GFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~--~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.+.+|||||||+|.++..+++.. +..+|++||+++.+++.|++.+..... ....++++++.+|+.++.. ..++||
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~--~d~sFD 798 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS--RLHDVD 798 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT--TSCSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc--ccCCee
Confidence 56899999999999999999885 457999999999999999885542100 1123589999999877532 358899
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|++...-...+... ...+++.+.++|+|| .+++..
T Consensus 799 lVV~~eVLeHL~dp~--l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 799 IGTCLEVIEHMEEDQ--ACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEEESCGGGSCHHH--HHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEEeCchhhCChHH--HHHHHHHHHHHcCCC-EEEEEe
Confidence 999843322111111 135899999999999 665544
No 235
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.93 E-value=1.2e-09 Score=104.62 Aligned_cols=107 Identities=27% Similarity=0.420 Sum_probs=80.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+..+++++|+ +.+++.|++++... ++ .++++++.+|..+.+ ...||+|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~----~~~~D~v 253 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE--GL-SDRVDVVEGDFFEPL----PRKADAI 253 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC----SSCEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--CC-CCceEEEeCCCCCCC----CCCccEE
Confidence 3567999999999999999988755668999999 99999999987543 22 248999999976532 2349999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-+..+... ...+++.++++|+|||.+++..
T Consensus 254 ~~~~vl~~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 254 ILSFVLLNWPDHD--AVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEcccccCCCHHH--HHHHHHHHHHhcCCCcEEEEEE
Confidence 9754332111111 1479999999999999888653
No 236
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.93 E-value=6.2e-10 Score=103.24 Aligned_cols=126 Identities=10% Similarity=0.067 Sum_probs=82.3
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEE--EechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH--IGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~yD 202 (345)
....+|||||||+|+.+..+++. .+|++||+++ ++..+++. +...... +.++.++ .+|+.++ ++++||
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~~-~~~v~~~~~~~D~~~l----~~~~fD 142 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITESY-GWNIVKFKSRVDIHTL----PVERTD 142 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCBT-TGGGEEEECSCCTTTS----CCCCCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhcc-CCCeEEEecccCHhHC----CCCCCc
Confidence 34579999999999999999887 5799999999 43222221 1100001 1268888 8897763 357899
Q ss_pred EEEEcCCCCCCCcccc---CcHHHHHHHHhccCCCc--EEEEeccchhhhhhHHHHHHHHHHhhcC
Q 019187 203 AVIVDSSDPIGPAQEL---FEKPFFESVAKALRPGG--VVSTQAESIWLHMHIIEDIVANCRQIFK 263 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l---~t~ef~~~v~r~LkpgG--vlv~~~~s~~~~~~~~~~i~~~l~~~F~ 263 (345)
+|++|.. .......+ -+..+++.+.++|+||| .|++..-.+.. ..+..++..++..|.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~--~~~~~~l~~l~~~f~ 205 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYS--VEVMERLSVMQRKWG 205 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTS--HHHHHHHHHHHHHHC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCC--hhHHHHHHHHHHHcC
Confidence 9999976 32221110 01137888999999999 99886533222 223356677777884
No 237
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.93 E-value=8.3e-09 Score=100.02 Aligned_cols=146 Identities=17% Similarity=0.098 Sum_probs=95.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||+|||+|.++.++++.....+|+++|+|+.+++.|++++... ++ ..+++++.+|+.+... +.++||+|
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~--gl-~~~i~~~~~D~~~~~~--~~~~fD~I 290 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA--GV-LDKIKFIQGDATQLSQ--YVDSVDFA 290 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--TC-GGGCEEEECCGGGGGG--TCSCEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--CC-CCceEEEECChhhCCc--ccCCcCEE
Confidence 4567999999999999999998854448999999999999999987653 22 2479999999988643 25789999
Q ss_pred EEcCCCCCCC-----ccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCCC
Q 019187 205 IVDSSDPIGP-----AQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSG 279 (345)
Q Consensus 205 i~D~~~p~~~-----~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~g 279 (345)
++|++-.... ...+ -.++++.++++| +|+.+++ +. ....+...+... -|+ .....+.|.++
T Consensus 291 i~npPyg~r~~~~~~~~~l-y~~~~~~l~r~l-~g~~~~i-~~----~~~~~~~~~~~~--G~~-----~~~~~~~~nG~ 356 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDL-YMKFFNELAKVL-EKRGVFI-TT----EKKAIEEAIAEN--GFE-----IIHHRVIGHGG 356 (373)
T ss_dssp EEECCCC------CCHHHH-HHHHHHHHHHHE-EEEEEEE-ES----CHHHHHHHHHHT--TEE-----EEEEEEEEETT
T ss_pred EECCCCCcccCcchhHHHH-HHHHHHHHHHHc-CCeEEEE-EC----CHHHHHHHHHHc--CCE-----EEEEEEEEcCC
Confidence 9987632211 1112 246888888988 3333333 22 223333322211 131 12345566666
Q ss_pred cEEEEEEecC
Q 019187 280 VIGFMLCSTE 289 (345)
Q Consensus 280 ~w~~~~ask~ 289 (345)
.+..++-++.
T Consensus 357 l~~~~~~~~~ 366 (373)
T 3tm4_A 357 LMVHLYVVKL 366 (373)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEeccC
Confidence 6766666554
No 238
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.90 E-value=3.1e-09 Score=96.53 Aligned_cols=114 Identities=14% Similarity=0.086 Sum_probs=75.8
Q ss_pred chhHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe
Q 019187 108 DECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG 187 (345)
Q Consensus 108 de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~ 187 (345)
......+++..+.. ....++|||||||+|.++..+++. +..+|++||+++.+++.|++..+ ++.....
T Consensus 21 g~~kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~---------~~~~~~~ 88 (232)
T 3opn_A 21 GGLKLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDE---------RVVVMEQ 88 (232)
T ss_dssp THHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCT---------TEEEECS
T ss_pred cHHHHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCc---------ccccccc
Confidence 33444556665432 234679999999999999999988 44699999999999999887543 3322211
Q ss_pred chHhHHh--hCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 188 DGVAFLK--AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 188 D~~~~l~--~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
.-..++. ..+...||.+.+|..-.. ...+++.++++|+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~~~~d~~~~D~v~~~-------l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 89 FNFRNAVLADFEQGRPSFTSIDVSFIS-------LDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CCGGGCCGGGCCSCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred ceEEEeCHhHcCcCCCCEEEEEEEhhh-------HHHHHHHHHHhccCCCEEEEE
Confidence 1112221 221224677777754321 146899999999999998875
No 239
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.89 E-value=5.2e-09 Score=100.62 Aligned_cols=105 Identities=22% Similarity=0.229 Sum_probs=79.8
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
..++|||||||+|..+..+++..+..++++.|+ |.+++.|++++... ..+|++++.+|.++ . +...+|+|+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~---~-~~~~~D~~~ 249 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFK---D-PLPEADLYI 249 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTT---S-CCCCCSEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCcccc---C-CCCCceEEE
Confidence 457999999999999999998766778998998 88999999987643 35799999999643 2 245689999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+-..-+..+... ...++++++++|+|||.+++..
T Consensus 250 ~~~vlh~~~d~~--~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 250 LARVLHDWADGK--CSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp EESSGGGSCHHH--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred eeeecccCCHHH--HHHHHHHHHhhCCCCCEEEEEE
Confidence 744332222111 2478999999999999887753
No 240
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=3.9e-09 Score=99.76 Aligned_cols=123 Identities=14% Similarity=0.098 Sum_probs=81.0
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEEC----CHHHHHHHHhcccccccCCCCCCEEEEEe-chHhHHhhCCCCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEI----DKMVVDVSKQFFPDVAVGFEDPRVTLHIG-DGVAFLKAVPEGT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEi----d~~vi~~ar~~~~~~~~~~~~~rv~v~~~-D~~~~l~~~~~~~ 200 (345)
...+|||||||+|+.+..+++. .+|++||+ ++..++.+ .. .....++++++.+ |+..+ +.++
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~----~~--~~~~~~~v~~~~~~D~~~l----~~~~ 148 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI----PM--STYGWNLVRLQSGVDVFFI----PPER 148 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC----CC--CSTTGGGEEEECSCCTTTS----CCCC
T ss_pred CCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH----Hh--hhcCCCCeEEEeccccccC----CcCC
Confidence 4579999999999999999988 37999999 44322211 10 1112357999988 86654 3578
Q ss_pred ccEEEEcCCCCCCCc--cccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcC
Q 019187 201 YDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFK 263 (345)
Q Consensus 201 yDvIi~D~~~p~~~~--~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~ 263 (345)
||+|++|.....+.. ...-+...++.+.++|+|||.|++..-.+. ......++..++..|.
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~--~~~~~~~l~~l~~~f~ 211 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY--MSSVIEKMEALQRKHG 211 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC--SHHHHHHHHHHHHHHC
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCC--CchHHHHHHHHHHHcC
Confidence 999999976532211 000011478888999999999998643221 1333566677777784
No 241
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.88 E-value=2.7e-09 Score=104.35 Aligned_cols=103 Identities=17% Similarity=0.115 Sum_probs=72.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|.++..++++. .+|+++|+++.+++.|++... ......+..+|+.. +.. ++++||+|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~~~~~~-l~~-~~~~fD~I 175 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREKGI------RVRTDFFEKATADD-VRR-TEGPANVI 175 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTTTC------CEECSCCSHHHHHH-HHH-HHCCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHcCC------CcceeeechhhHhh-ccc-CCCCEEEE
Confidence 346799999999999999999873 489999999999999998611 11011122233332 221 25789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-...+ . -..+++.++++|+|||++++..
T Consensus 176 ~~~~vl~h~~--d--~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 176 YAANTLCHIP--Y--VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEESCGGGCT--T--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECChHHhcC--C--HHHHHHHHHHHcCCCeEEEEEe
Confidence 9854322111 1 3689999999999999999875
No 242
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.86 E-value=1.4e-08 Score=94.39 Aligned_cols=111 Identities=16% Similarity=0.201 Sum_probs=77.5
Q ss_pred CCceEEEEeccc--hHHHHHHHh-cCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHh--hCC--C
Q 019187 126 NPKKVLVIGGGD--GGVLREVSR-HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK--AVP--E 198 (345)
Q Consensus 126 ~~~~VL~IG~G~--G~~~~~ll~-~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~--~~~--~ 198 (345)
..++|||||||. ++.+.++++ ..+..+|++||+|+.|++.||+.+... ...+++++.+|+.+.-. ..+ .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCTTCHHHHHTCHHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecccChhhhhcccccc
Confidence 457999999997 445555544 344679999999999999999988642 23479999999977521 000 2
Q ss_pred CCcc-----EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 199 GTYD-----AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 199 ~~yD-----vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+.|| +|++...-++.+... --...++.+++.|+|||+|++..
T Consensus 154 ~~~D~~~p~av~~~avLH~l~d~~-~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFVLDED-DAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGSCGGG-CHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cccCcCCcchHHhhhhHhcCCchh-hHHHHHHHHHHhCCCCcEEEEEe
Confidence 4455 466665544433211 01468999999999999999864
No 243
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.85 E-value=1.3e-09 Score=100.37 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=80.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.|.+|||||||.|-++..++...+..+|+++|||+.+++++++++... ..+.++...|. +...+.++||+|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-----g~~~~~~v~D~---~~~~p~~~~Dva 202 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-----NVPHRTNVADL---LEDRLDEPADVT 202 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-----TCCEEEEECCT---TTSCCCSCCSEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeee---cccCCCCCcchH
Confidence 5588999999999999999888767889999999999999999998764 34578888883 333457889999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-|.-... -....| .+.+.|+++|++|..-
T Consensus 203 L~lkti~~Le~q--~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 203 LLLKTLPCLETQ--QRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp EETTCHHHHHHH--STTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHHHHHHhhhh--hhHHHH-HHHHHhCCCCEEEecc
Confidence 975543321100 011345 7899999999998643
No 244
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.84 E-value=7.7e-09 Score=98.92 Aligned_cols=104 Identities=18% Similarity=0.178 Sum_probs=74.8
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|..+..+++..+..+++++|+ +.++. ++..... + ..++++++.+|.. ... . .||+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~--~-~~~~v~~~~~d~~---~~~-p-~~D~v 251 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAP--D-VAGRWKVVEGDFL---REV-P-HADVH 251 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCG--G-GTTSEEEEECCTT---TCC-C-CCSEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccccccc--C-CCCCeEEEecCCC---CCC-C-CCcEE
Confidence 4567999999999999999998766678999999 55555 4433321 1 2358999999975 223 3 89999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-+..+... ...++++++++|+|||.+++..
T Consensus 252 ~~~~vlh~~~d~~--~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 252 VLKRILHNWGDED--SVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEehhccCCCHHH--HHHHHHHHHHhcCCCCEEEEEE
Confidence 9754332222111 1479999999999999998754
No 245
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.81 E-value=8.8e-09 Score=105.21 Aligned_cols=77 Identities=18% Similarity=0.224 Sum_probs=65.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.+|.||||||||+|.++..+++. ..+|++||+++.+++.|+.+.... ...++++.++|+.+.....++++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEEN----PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTS----TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhc----CCCceEEEECCHHHHhhhccCCCccEE
Confidence 46789999999999999999998 468999999999999999987643 224699999999988765546889999
Q ss_pred EEc
Q 019187 205 IVD 207 (345)
Q Consensus 205 i~D 207 (345)
++-
T Consensus 139 ~~~ 141 (569)
T 4azs_A 139 IGL 141 (569)
T ss_dssp EEE
T ss_pred EEC
Confidence 973
No 246
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.81 E-value=6.7e-09 Score=100.33 Aligned_cols=99 Identities=18% Similarity=0.157 Sum_probs=74.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|..+. .+.+ |+|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~---~p~~--D~v 265 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDG---VPKG--DAI 265 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---CCCC--SEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCC---CCCC--CEE
Confidence 3467999999999999999988766678999999 888877653 25899999997652 2233 999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-+..+... ...++++++++|+|||.+++..
T Consensus 266 ~~~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 266 FIKWICHDWSDEH--CLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEESCGGGBCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEechhhcCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 9754432222111 2478999999999999988753
No 247
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.80 E-value=1.2e-08 Score=95.41 Aligned_cols=76 Identities=17% Similarity=0.296 Sum_probs=61.6
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|.++..+++. ..+|++||+|+.+++.+++.+... +. .++++++.+|+.++ . -..||+|+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~D~~~~--~--~~~fD~vv 98 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGT--PV-ASKLQVLVGDVLKT--D--LPFFDTCV 98 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTS--TT-GGGEEEEESCTTTS--C--CCCCSEEE
T ss_pred CCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEEcceecc--c--chhhcEEE
Confidence 5679999999999999999988 358999999999999999987532 11 25899999998764 1 34799999
Q ss_pred EcCCC
Q 019187 206 VDSSD 210 (345)
Q Consensus 206 ~D~~~ 210 (345)
++.+.
T Consensus 99 ~nlpy 103 (285)
T 1zq9_A 99 ANLPY 103 (285)
T ss_dssp EECCG
T ss_pred EecCc
Confidence 87654
No 248
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.79 E-value=8.4e-09 Score=96.09 Aligned_cols=111 Identities=13% Similarity=0.144 Sum_probs=74.4
Q ss_pred CCceEEEEeccchH----HHHHHHhc-CC---CcEEEEEECCHHHHHHHHhccccc-c----------------cCCCC-
Q 019187 126 NPKKVLVIGGGDGG----VLREVSRH-SS---VEKIDICEIDKMVVDVSKQFFPDV-A----------------VGFED- 179 (345)
Q Consensus 126 ~~~~VL~IG~G~G~----~~~~ll~~-~~---~~~V~~VEid~~vi~~ar~~~~~~-~----------------~~~~~- 179 (345)
.+.+||++|||+|. ++..+++. +. ..+|+++|||+.+++.|++..-.. . ....+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55555554 21 248999999999999999863100 0 00001
Q ss_pred ---------CCEEEEEechHhHHhhCC-CCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 180 ---------PRVTLHIGDGVAFLKAVP-EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 180 ---------~rv~v~~~D~~~~l~~~~-~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
.++++..+|..+. ..+ .++||+|+|-..-..-... .....++.++++|+|||.|++-
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crnvliyf~~~--~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRNVMIYFDKT--TQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECSSGGGSCHH--HHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECCchHhCCHH--HHHHHHHHHHHHhCCCcEEEEE
Confidence 3789999997652 111 4689999983221111111 1257899999999999999983
No 249
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.79 E-value=1e-08 Score=99.00 Aligned_cols=99 Identities=22% Similarity=0.232 Sum_probs=74.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|..+ ..+.+ |+|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~---~~p~~--D~v 263 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFK---EVPSG--DTI 263 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT---CCCCC--SEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCC---CCCCC--CEE
Confidence 3467999999999999999988766678999999 888877654 2589999999765 22233 999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++...-+..+... ...++++++++|+|||.+++..
T Consensus 264 ~~~~vlh~~~d~~--~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 264 LMKWILHDWSDQH--CATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred EehHHhccCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 9754432222111 2478999999999999988753
No 250
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.77 E-value=6.3e-09 Score=100.43 Aligned_cols=98 Identities=21% Similarity=0.214 Sum_probs=74.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+...+|||||||+|..+..+++..+..+++++|+ +.+++.|++. ++++++.+|..+. . .. ||+|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~-~~-~D~v 271 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS---V-PQ-GDAM 271 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC---C-CC-EEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC---C-CC-CCEE
Confidence 3568999999999999999998765668999999 9998877642 4699999997652 2 23 9999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++...-+..+... ...+++.++++|+|||.+++.
T Consensus 272 ~~~~~lh~~~d~~--~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 272 ILKAVCHNWSDEK--CIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEESSGGGSCHHH--HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecccccCCHHH--HHHHHHHHHHhcCCCCEEEEE
Confidence 9754432222111 137999999999999998875
No 251
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.77 E-value=2.3e-08 Score=93.89 Aligned_cols=127 Identities=16% Similarity=0.244 Sum_probs=79.1
Q ss_pred hHHHHHHHhcc--cccCCCCceEEEEec------cchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCC
Q 019187 110 CAYQEMITHLP--LCSIPNPKKVLVIGG------GDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDP 180 (345)
Q Consensus 110 ~~Y~e~l~~l~--l~~~~~~~~VL~IG~------G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~ 180 (345)
..|.++...+. ....+...+|||||| |.|. ..+++. +...+|++||+++. + +
T Consensus 45 ~~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~ 105 (290)
T 2xyq_A 45 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------S 105 (290)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------C
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------C
Confidence 45666655441 122345679999999 4476 334443 33568999999998 1 2
Q ss_pred CEEE-EEechHhHHhhCCCCCccEEEEcCCCCCCC------c-cccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHH
Q 019187 181 RVTL-HIGDGVAFLKAVPEGTYDAVIVDSSDPIGP------A-QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIE 252 (345)
Q Consensus 181 rv~v-~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~------~-~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~ 252 (345)
++++ +.+|+.+.. . .++||+|++|...+... . ...+-..+++.+.++|+|||.|++..... ....
T Consensus 106 ~v~~~i~gD~~~~~--~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~----~~~~ 178 (290)
T 2xyq_A 106 DADSTLIGDCATVH--T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH----SWNA 178 (290)
T ss_dssp SSSEEEESCGGGCC--C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS----SCCH
T ss_pred CCEEEEECccccCC--c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc----CCHH
Confidence 5677 999987642 1 46899999987543210 0 01112478899999999999999843111 1123
Q ss_pred HHHHHHHhh-c
Q 019187 253 DIVANCRQI-F 262 (345)
Q Consensus 253 ~i~~~l~~~-F 262 (345)
.+.+.+++. |
T Consensus 179 ~l~~~l~~~GF 189 (290)
T 2xyq_A 179 DLYKLMGHFSW 189 (290)
T ss_dssp HHHHHHTTEEE
T ss_pred HHHHHHHHcCC
Confidence 455556655 5
No 252
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.77 E-value=1.5e-08 Score=89.43 Aligned_cols=126 Identities=14% Similarity=0.227 Sum_probs=81.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+.+|||||||+|..+..++ .+|+++|+++. +++++.+|+.+. . .+.++||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~~-~-~~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQV-P-LEDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTSC-S-CCTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEeccccC-C-CCCCCEeEE
Confidence 355799999999999988773 47999999987 234667776552 1 235789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh-cCCcceEEEEEEeecCCCcEEE
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGSVNYAWTTVPTYPSGVIGF 283 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~-F~~~v~~~~~~vP~y~~g~w~~ 283 (345)
++...-+. . -...+++.++++|+|||.+++....... .....+.+.+++. |. ...+. +..+.+.+
T Consensus 120 ~~~~~l~~-~----~~~~~l~~~~~~L~~gG~l~i~~~~~~~--~~~~~~~~~l~~~Gf~------~~~~~-~~~~~~~~ 185 (215)
T 2zfu_A 120 VFCLSLMG-T----NIRDFLEEANRVLKPGGLLKVAEVSSRF--EDVRTFLRAVTKLGFK------IVSKD-LTNSHFFL 185 (215)
T ss_dssp EEESCCCS-S----CHHHHHHHHHHHEEEEEEEEEEECGGGC--SCHHHHHHHHHHTTEE------EEEEE-CCSTTCEE
T ss_pred EEehhccc-c----CHHHHHHHHHHhCCCCeEEEEEEcCCCC--CCHHHHHHHHHHCCCE------EEEEe-cCCCeEEE
Confidence 98654331 1 1368999999999999999885422111 1123344444433 41 12222 23356777
Q ss_pred EEEecCC
Q 019187 284 MLCSTEG 290 (345)
Q Consensus 284 ~~ask~~ 290 (345)
+.+.|..
T Consensus 186 ~~~~k~~ 192 (215)
T 2zfu_A 186 FDFQKTG 192 (215)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 7887764
No 253
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.77 E-value=1e-08 Score=98.13 Aligned_cols=98 Identities=16% Similarity=0.157 Sum_probs=74.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|..+..+++..+..+++++|+ +.+++.|+++ ++++++.+|..+ .. . .||+|+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~---~~-p-~~D~v~ 251 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFT---SI-P-NADAVL 251 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTT---CC-C-CCSEEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccC---CC-C-CccEEE
Confidence 567999999999999999998755668999999 9998887652 359999999754 22 2 399999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCC---CcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRP---GGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~Lkp---gGvlv~~~ 241 (345)
+...-+..+... ...+++.++++|+| ||.+++..
T Consensus 252 ~~~~lh~~~d~~--~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 252 LKYILHNWTDKD--CLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred eehhhccCCHHH--HHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 754332222111 13789999999999 99887753
No 254
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.76 E-value=1.2e-07 Score=89.37 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=93.0
Q ss_pred CceEEEEeccchHHHHHHH----hcCCCcEEE--EEECCH------------HHHHHHHhcccccccCCCCCC--EEEEE
Q 019187 127 PKKVLVIGGGDGGVLREVS----RHSSVEKID--ICEIDK------------MVVDVSKQFFPDVAVGFEDPR--VTLHI 186 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll----~~~~~~~V~--~VEid~------------~vi~~ar~~~~~~~~~~~~~r--v~v~~ 186 (345)
.-+||++|.|+|......+ +..+..++. .+|.++ ++.+......+.. ...+ ++++.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~----~~~~v~L~l~~ 172 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY----EGERLSLKVLL 172 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE----ECSSEEEEEEE
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc----cCCcEEEEEEe
Confidence 4589999999998654432 223344554 455432 1111111122221 2334 56889
Q ss_pred echHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhh-cCCc
Q 019187 187 GDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGS 265 (345)
Q Consensus 187 ~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~-F~~~ 265 (345)
+|+.+.+++....++|+|+.|.+.|.. .+.|++.++|+.++++++|||++++.+.. . .+.+.|.++ |
T Consensus 173 GDa~~~l~~l~~~~~Da~flDgFsP~k-NPeLWs~e~f~~l~~~~~pgg~laTYtaa-----g---~VRR~L~~aGF--- 240 (308)
T 3vyw_A 173 GDARKRIKEVENFKADAVFHDAFSPYK-NPELWTLDFLSLIKERIDEKGYWVSYSSS-----L---SVRKSLLTLGF--- 240 (308)
T ss_dssp SCHHHHGGGCCSCCEEEEEECCSCTTT-SGGGGSHHHHHHHHTTEEEEEEEEESCCC-----H---HHHHHHHHTTC---
T ss_pred chHHHHHhhhcccceeEEEeCCCCccc-CcccCCHHHHHHHHHHhCCCcEEEEEeCc-----H---HHHHHHHHCCC---
Confidence 999999988745689999999998854 35799999999999999999999986533 2 233445543 4
Q ss_pred ceEEEEEEeecCCCcEEEEEEecCC
Q 019187 266 VNYAWTTVPTYPSGVIGFMLCSTEG 290 (345)
Q Consensus 266 v~~~~~~vP~y~~g~w~~~~ask~~ 290 (345)
....+|-|+ +-.-.+.|++..
T Consensus 241 ---~V~k~~G~g-~KReml~A~~~~ 261 (308)
T 3vyw_A 241 ---KVGSSREIG-RKRKGTVASLKA 261 (308)
T ss_dssp ---EEEEEECC----CEEEEEESSS
T ss_pred ---EEEecCCCC-CCCceeEEecCC
Confidence 235678774 446778888753
No 255
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.74 E-value=4.6e-08 Score=92.58 Aligned_cols=116 Identities=14% Similarity=0.066 Sum_probs=82.9
Q ss_pred CCCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCC-CCCcc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP-EGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~~yD 202 (345)
....+|||+|||.|+.+.++++. .+..+|+++|+++..++.+++++... .-.+++++.+|+.++....+ .++||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~----g~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA----GVSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCeEEEEeCChHhcCccccccCCCC
Confidence 34579999999999999999875 34568999999999999999988754 22479999999887643211 15799
Q ss_pred EEEEcCCCCC-CC-----c---------ccc-----CcHHHHHHHHhccCCCcEEEEeccchh
Q 019187 203 AVIVDSSDPI-GP-----A---------QEL-----FEKPFFESVAKALRPGGVVSTQAESIW 245 (345)
Q Consensus 203 vIi~D~~~p~-~~-----~---------~~l-----~t~ef~~~v~r~LkpgGvlv~~~~s~~ 245 (345)
.|++|++... +. . ..+ ...++++.+.+.|+ ||+|+..+.+..
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 9999986421 11 0 000 11346777777786 998887665543
No 256
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.72 E-value=1.5e-08 Score=92.40 Aligned_cols=102 Identities=17% Similarity=0.172 Sum_probs=75.2
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
+.|.+|||||||.|-++..+. +..+++++|||+.+++.+++++... .+++++...|...- ...++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~---~~~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCA---PPAEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTS---CCCCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccC---CCCCCcchH
Confidence 568899999999999988776 4679999999999999999997653 46788999995433 236789999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
++...-|.- +..-....+ .+.+.|+++|++|..
T Consensus 173 Lllk~lh~L--E~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 173 LIFKLLPLL--EREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp EEESCHHHH--HHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHHHHHh--hhhchhhHH-HHHHHhcCCCEEEEc
Confidence 865332211 011112344 677799999988864
No 257
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.72 E-value=3.2e-08 Score=93.07 Aligned_cols=74 Identities=20% Similarity=0.286 Sum_probs=61.9
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|.++..+++. ..+|++||+|+.+++.+++.+.. .++++++.+|+.++-. ++..||+|+
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~~--~~~~fD~Iv 119 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVDL--NKLDFNKVV 119 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSCG--GGSCCSEEE
T ss_pred CcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCCc--ccCCccEEE
Confidence 4579999999999999999988 46999999999999999998752 3589999999877522 235799999
Q ss_pred EcCC
Q 019187 206 VDSS 209 (345)
Q Consensus 206 ~D~~ 209 (345)
.+.+
T Consensus 120 ~NlP 123 (295)
T 3gru_A 120 ANLP 123 (295)
T ss_dssp EECC
T ss_pred EeCc
Confidence 7754
No 258
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.71 E-value=1.4e-08 Score=99.58 Aligned_cols=81 Identities=17% Similarity=0.111 Sum_probs=66.2
Q ss_pred CceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
.++|||||||+|..+..+++. ..+|++||+|+.+++.|++++.....++ .+++++++|+.+++...+.++||+|++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 579999999999999999887 3699999999999999999986431122 479999999998876422357999999
Q ss_pred cCCCC
Q 019187 207 DSSDP 211 (345)
Q Consensus 207 D~~~p 211 (345)
|++-.
T Consensus 170 DPPrr 174 (410)
T 3ll7_A 170 DPARR 174 (410)
T ss_dssp CCEEC
T ss_pred CCCCc
Confidence 98643
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.71 E-value=2e-08 Score=97.85 Aligned_cols=111 Identities=16% Similarity=0.187 Sum_probs=79.3
Q ss_pred CCceEEEEeccchHHHHHHHhcCC--------------------------------------CcEEEEEECCHHHHHHHH
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSS--------------------------------------VEKIDICEIDKMVVDVSK 167 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~--------------------------------------~~~V~~VEid~~vi~~ar 167 (345)
...+|||+|||+|.++.+++.... ..+|+++|+|+.+++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 457899999999999999876411 147999999999999999
Q ss_pred hcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCC--CcEEEEecc
Q 019187 168 QFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRP--GGVVSTQAE 242 (345)
Q Consensus 168 ~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkp--gGvlv~~~~ 242 (345)
+++... ++. .++++..+|+.++.. .++||+||+|++-.......--..++|+.+.+.|++ ||.+.+-+.
T Consensus 275 ~Na~~~--gl~-~~i~~~~~D~~~l~~---~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 275 ENAEIA--GVD-EYIEFNVGDATQFKS---EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHH--TCG-GGEEEEECCGGGCCC---SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHc--CCC-CceEEEECChhhcCc---CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 987654 222 379999999887643 468999998876432111111124678877777776 776665443
No 260
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.71 E-value=4.4e-08 Score=95.43 Aligned_cols=110 Identities=14% Similarity=0.088 Sum_probs=80.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCC--------------------------------------cEEEEEECCHHHHHHHH
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSV--------------------------------------EKIDICEIDKMVVDVSK 167 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~--------------------------------------~~V~~VEid~~vi~~ar 167 (345)
....|||.+||+|.++.+++..... .+|+++|+|+.+++.|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 4568999999999999998754111 36999999999999999
Q ss_pred hcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCC--CcEEEEec
Q 019187 168 QFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRP--GGVVSTQA 241 (345)
Q Consensus 168 ~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkp--gGvlv~~~ 241 (345)
+++... ++. .+++++.+|+.++.. .++||+|++|++-.......--..++|+.+.+.|++ ||.+.+-+
T Consensus 274 ~Na~~~--gl~-~~I~~~~~D~~~l~~---~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 274 KNAREV--GLE-DVVKLKQMRLQDFKT---NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHT--TCT-TTEEEEECCGGGCCC---CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHc--CCC-CceEEEECChHHCCc---cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 987654 332 379999999887632 468999999876433221111125688888887776 88776644
No 261
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.70 E-value=6.4e-08 Score=91.29 Aligned_cols=90 Identities=22% Similarity=0.276 Sum_probs=69.9
Q ss_pred HHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh
Q 019187 112 YQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA 191 (345)
Q Consensus 112 Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~ 191 (345)
+.+++..+.. ....+|||+|||+|+.+..+++..+..+|+++|+|+.+++.|++++... . .+++++.+|..+
T Consensus 15 l~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~----g-~~v~~v~~d~~~ 86 (301)
T 1m6y_A 15 VREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF----S-DRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG----T-TTEEEEECCGGG
T ss_pred HHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----C-CcEEEEECCHHH
Confidence 4556655432 3457999999999999999998754579999999999999999988754 2 589999999876
Q ss_pred H---HhhCCCCCccEEEEcCC
Q 019187 192 F---LKAVPEGTYDAVIVDSS 209 (345)
Q Consensus 192 ~---l~~~~~~~yDvIi~D~~ 209 (345)
. +.....++||.|++|+.
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHhcCCCCCCEEEEcCc
Confidence 4 23221257999999874
No 262
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.70 E-value=1.7e-08 Score=94.89 Aligned_cols=76 Identities=17% Similarity=0.170 Sum_probs=58.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||+|.++..+++. ..+|++||+|+.+++.+++++... ..++++++.+|+.++ +.++||+|
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~----~~~~v~~~~~D~~~~----~~~~~D~V 110 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYE----GYNNLEVYEGDAIKT----VFPKFDVC 110 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHT----TCCCEEC----CCSS----CCCCCSEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHc----CCCceEEEECchhhC----CcccCCEE
Confidence 35679999999999999999987 468999999999999999987532 225899999997664 23579999
Q ss_pred EEcCCC
Q 019187 205 IVDSSD 210 (345)
Q Consensus 205 i~D~~~ 210 (345)
++|++.
T Consensus 111 v~n~py 116 (299)
T 2h1r_A 111 TANIPY 116 (299)
T ss_dssp EEECCG
T ss_pred EEcCCc
Confidence 998653
No 263
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.69 E-value=2.6e-08 Score=97.29 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=78.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCC--------------------------------------cEEEEEECCHHHHHHHH
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSV--------------------------------------EKIDICEIDKMVVDVSK 167 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~--------------------------------------~~V~~VEid~~vi~~ar 167 (345)
....|||.+||+|.++.+++..... .+|+++|+|+.+++.|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 4578999999999999998764211 46999999999999999
Q ss_pred hcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCC--CcEEEEec
Q 019187 168 QFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRP--GGVVSTQA 241 (345)
Q Consensus 168 ~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkp--gGvlv~~~ 241 (345)
+++... ++. .+++++.+|+.++.. .++||+|++|++-.......--..++|+.+.+.|++ ||.+.+-+
T Consensus 281 ~Na~~~--gl~-~~I~~~~~D~~~~~~---~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 281 QNAVEA--GLG-DLITFRQLQVADFQT---EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHT--TCT-TCSEEEECCGGGCCC---CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHc--CCC-CceEEEECChHhCCC---CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 987654 232 379999999887632 468999998876432211111124577777777766 88776644
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.69 E-value=8.4e-08 Score=89.15 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=70.4
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcC
Q 019187 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~ 208 (345)
+|||||||+|.++..+++.. .+|++||+|+.+++.+++.++ +.+++++.+|+.++-... ...+|.|+.++
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~-~~~~~~iv~Nl 118 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEE-VPQGSLLVANL 118 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGG-SCTTEEEEEEE
T ss_pred eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhh-ccCccEEEecC
Confidence 99999999999999999983 689999999999999999875 258999999988763211 23689999887
Q ss_pred CCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 209 SDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 209 ~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+..... .-+++.+....-..+++++|-
T Consensus 119 Py~iss------~il~~ll~~~~~~~~~lm~Qk 145 (271)
T 3fut_A 119 PYHIAT------PLVTRLLKTGRFARLVFLVQK 145 (271)
T ss_dssp CSSCCH------HHHHHHHHHCCEEEEEEEEEH
T ss_pred cccccH------HHHHHHhcCCCCCEEEEEeee
Confidence 543322 222333322122456777764
No 265
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.67 E-value=2.6e-08 Score=98.68 Aligned_cols=111 Identities=16% Similarity=0.185 Sum_probs=79.8
Q ss_pred CCceEEEEeccchHHHHHHHhcC-------------CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS-------------SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~-------------~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~ 192 (345)
...+|||.|||+|+++..++++- ...+++++|+|+.++++|+.++... +....+++++++|....
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~--g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH--GIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT--TCCSSCCSEEECCTTTS
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh--CCCcCCCCEeeCCCCCC
Confidence 34699999999999999887651 2357999999999999999876532 22222678899997654
Q ss_pred HhhCCCCCccEEEEcCCCCCCCc-c-c-----c------CcHHHHHHHHhccCCCcEEEEec
Q 019187 193 LKAVPEGTYDAVIVDSSDPIGPA-Q-E-----L------FEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 193 l~~~~~~~yDvIi~D~~~p~~~~-~-~-----l------~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
. ..++||+|+++++-..... . . + ....|++.+.+.|+|||.+++-.
T Consensus 249 ~---~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 249 E---PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp C---CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 2 1358999998875322110 0 0 0 01479999999999999987655
No 266
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.63 E-value=9.5e-08 Score=87.99 Aligned_cols=75 Identities=17% Similarity=0.368 Sum_probs=60.6
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH-HhhC-CCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF-LKAV-PEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~-l~~~-~~~~yDv 203 (345)
...+|||||||+|.++..+++.. .+|++||+|+.+++.+++.+.. .++++++.+|+.++ +.+. ..+.||
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~- 99 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVKTDKPLR- 99 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSCCSSCEE-
T ss_pred CcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhccCCCeE-
Confidence 45799999999999999999883 6899999999999999998753 35899999999876 3332 135688
Q ss_pred EEEcCC
Q 019187 204 VIVDSS 209 (345)
Q Consensus 204 Ii~D~~ 209 (345)
|+.+++
T Consensus 100 vv~NlP 105 (255)
T 3tqs_A 100 VVGNLP 105 (255)
T ss_dssp EEEECC
T ss_pred EEecCC
Confidence 776654
No 267
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.61 E-value=1.7e-07 Score=85.45 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=58.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++.... ...| .|+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~-~~~~-~vv 99 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKFPK-NQSY-KIF 99 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCCCS-SCCC-EEE
T ss_pred CCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCccc-CCCe-EEE
Confidence 56799999999999999999884 6899999999999999998753 258999999987753211 2345 567
Q ss_pred EcCC
Q 019187 206 VDSS 209 (345)
Q Consensus 206 ~D~~ 209 (345)
++++
T Consensus 100 ~nlP 103 (244)
T 1qam_A 100 GNIP 103 (244)
T ss_dssp EECC
T ss_pred EeCC
Confidence 6654
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.60 E-value=2.1e-08 Score=92.58 Aligned_cols=81 Identities=17% Similarity=0.108 Sum_probs=64.4
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCH-------HHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDK-------MVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE 198 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~-------~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~ 198 (345)
...+|||+|||+|..+..+++. ..+|+++|+++ .+++.|+++.... ++ ..+++++.+|+.+++...++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~--~~-~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQ--DT-AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHH--HH-HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhh--CC-ccCeEEEECCHHHHHHhhhc
Confidence 3569999999999999999987 35899999999 9999998876432 11 13699999999998764423
Q ss_pred --CCccEEEEcCCCC
Q 019187 199 --GTYDAVIVDSSDP 211 (345)
Q Consensus 199 --~~yDvIi~D~~~p 211 (345)
++||+|++|+..+
T Consensus 158 ~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHCCCSEEEECCCC-
T ss_pred cCCCccEEEECCCCC
Confidence 6899999997654
No 269
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.60 E-value=5.3e-08 Score=93.33 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=73.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|..+ .. ..||+|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~--~~~D~v~ 256 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK---SI--PSADAVL 256 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT---CC--CCCSEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC---CC--CCceEEE
Confidence 457999999999999999998755668999999 788876654 1359999999765 22 2499999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCC---CcEEEEe
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRP---GGVVSTQ 240 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~Lkp---gGvlv~~ 240 (345)
+...-+..+... ...+++.++++|+| ||.+++.
T Consensus 257 ~~~vlh~~~d~~--~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 257 LKWVLHDWNDEQ--SLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred EcccccCCCHHH--HHHHHHHHHHhCCCCCCCcEEEEE
Confidence 754432222111 23799999999999 9988774
No 270
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.59 E-value=3.8e-08 Score=90.89 Aligned_cols=82 Identities=13% Similarity=0.096 Sum_probs=64.7
Q ss_pred ceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccccc--CCCC---CCEEEEEechHhHHhhCCCCCcc
Q 019187 128 KKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV--GFED---PRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 128 ~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~--~~~~---~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.+|||+|||.|..+.++++.. .+|++||+++.+++++++.+..... ..++ .+++++.+|+.++++.. .++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~-~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI-TPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC-SSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC-cccCC
Confidence 699999999999999999883 4799999999988877776543211 1111 47999999999998765 45799
Q ss_pred EEEEcCCCCC
Q 019187 203 AVIVDSSDPI 212 (345)
Q Consensus 203 vIi~D~~~p~ 212 (345)
+|++|+..+.
T Consensus 167 vV~lDP~y~~ 176 (258)
T 2oyr_A 167 VVYLDPMFPH 176 (258)
T ss_dssp EEEECCCCCC
T ss_pred EEEEcCCCCC
Confidence 9999987654
No 271
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.59 E-value=6.8e-08 Score=90.27 Aligned_cols=109 Identities=14% Similarity=0.052 Sum_probs=83.9
Q ss_pred CCCceEEEEeccchHHHHHHHhcC-----CCcEEEEEECCHH--------------------------HHHHHHhccccc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHS-----SVEKIDICEIDKM--------------------------VVDVSKQFFPDV 173 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~-----~~~~V~~VEid~~--------------------------vi~~ar~~~~~~ 173 (345)
..|++||+||+..|..+..++... +..+|+++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 468899999999999988875531 2568999996421 356778887654
Q ss_pred ccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 174 AVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 174 ~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
++..++++++.||+.+.+...+.++||+|++|+.. . ..+..+++.+...|+|||++++..
T Consensus 185 --gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y----~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 --DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--Y----ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp --TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--H----HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred --CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--c----ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 34347999999999998887655789999999731 1 114688999999999999999864
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.51 E-value=5.1e-07 Score=82.70 Aligned_cols=98 Identities=20% Similarity=0.311 Sum_probs=69.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH-hhCCCCCccEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL-KAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l-~~~~~~~yDvI 204 (345)
...+|||||||+|.++..+++.+ ..+|++||+|+.+++.++++ . ..+++++.+|+.++- .+. .+.| .|
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~-~~~~-~v 99 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSL-GKEL-KV 99 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGS-CSSE-EE
T ss_pred CcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHc-cCCc-EE
Confidence 46799999999999999999883 57999999999999999887 3 248999999987762 222 1233 67
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhc--cCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKA--LRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~--LkpgGvlv~~~ 241 (345)
+.+.+... +...+..+.+. .-+.+++++|-
T Consensus 100 v~NlPy~i-------~~~il~~ll~~~~~~~~~~~m~Qk 131 (249)
T 3ftd_A 100 VGNLPYNV-------ASLIIENTVYNKDCVPLAVFMVQK 131 (249)
T ss_dssp EEECCTTT-------HHHHHHHHHHTGGGCSEEEEEEEH
T ss_pred EEECchhc-------cHHHHHHHHhcCCCCceEEEEEeH
Confidence 76765432 22333333332 34567777764
No 273
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.51 E-value=9.5e-08 Score=81.77 Aligned_cols=89 Identities=17% Similarity=0.204 Sum_probs=67.0
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCccE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~yDv 203 (345)
....+||+||||. | .+|+++.+++.|++.++. +++++.+|+.+.... .++++||+
T Consensus 11 ~~g~~vL~~~~g~---------------v-~vD~s~~ml~~a~~~~~~--------~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------S-PVEALKGLVDKLQALTGN--------EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp CTTSEEEEEECTT---------------S-CHHHHHHHHHHHHHHTTT--------TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred CCCCEEEEecCCc---------------e-eeeCCHHHHHHHHHhccc--------CcEEEEechhcCccccCCCCCEeE
Confidence 4568999999985 1 389999999999987642 489999998875421 13688999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|++...-+... .. ...++++++++|||||.+++.
T Consensus 67 V~~~~~l~~~~-~~--~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 67 ILSGLVPGSTT-LH--SAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEECCSTTCCC-CC--CHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECChhhhcc-cC--HHHHHHHHHHHCCCCEEEEEE
Confidence 99854433220 11 268999999999999999985
No 274
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.50 E-value=6.4e-09 Score=94.68 Aligned_cols=87 Identities=21% Similarity=0.341 Sum_probs=64.4
Q ss_pred HHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH
Q 019187 111 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV 190 (345)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~ 190 (345)
.+..++..+. .....+|||||||+|.++..+++.. .+|+++|+|+.+++.+++++. ..++++++.+|+.
T Consensus 17 ~~~~i~~~~~---~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~------~~~~v~~~~~D~~ 85 (245)
T 1yub_A 17 VLNQIIKQLN---LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK------LNTRVTLIHQDIL 85 (245)
T ss_dssp THHHHHHHCC---CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT------TCSEEEECCSCCT
T ss_pred HHHHHHHhcC---CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc------cCCceEEEECChh
Confidence 3444444432 2355799999999999999999883 689999999999999988764 2358999999987
Q ss_pred hHHhhCCCCCccEEEEcCCC
Q 019187 191 AFLKAVPEGTYDAVIVDSSD 210 (345)
Q Consensus 191 ~~l~~~~~~~yDvIi~D~~~ 210 (345)
++... ..++| .|+++++.
T Consensus 86 ~~~~~-~~~~f-~vv~n~Py 103 (245)
T 1yub_A 86 QFQFP-NKQRY-KIVGNIPY 103 (245)
T ss_dssp TTTCC-CSSEE-EEEEECCS
T ss_pred hcCcc-cCCCc-EEEEeCCc
Confidence 75321 12578 77777653
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.46 E-value=2.7e-07 Score=93.70 Aligned_cols=115 Identities=13% Similarity=0.057 Sum_probs=80.5
Q ss_pred CCceEEEEeccchHHHHHHHhcC---C---------------CcEEEEEECCHHHHHHHHhcccccccCCCC---CCEEE
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS---S---------------VEKIDICEIDKMVVDVSKQFFPDVAVGFED---PRVTL 184 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~---~---------------~~~V~~VEid~~vi~~ar~~~~~~~~~~~~---~rv~v 184 (345)
...+|||.+||+|+++..++++- . ..+++++|+|+.++++|+.++... +... .++++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~--gi~~~~~~~~~I 246 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH--DIEGNLDHGGAI 246 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT--TCCCBGGGTBSE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh--CCCccccccCCe
Confidence 34699999999999998877641 1 137999999999999999876432 2221 13789
Q ss_pred EEechHhHHhhCCCCCccEEEEcCCCCCCCcc----------ccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 185 HIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQ----------ELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 185 ~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~----------~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+++|....... ..++||+|+++++-...... .-....|++.+.+.|+|||++++-...
T Consensus 247 ~~gDtL~~~~~-~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 247 RLGNTLGSDGE-NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp EESCTTSHHHH-TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EeCCCcccccc-cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 99997654322 25789999988764221110 001247999999999999988776543
No 276
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.46 E-value=2.7e-06 Score=82.01 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=96.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhccccccc--CCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV--GFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~--~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
....+|||+++|.|+=+.+++.......|+++|+++.-++..++++..... .....++.+...|+..+-... .++||
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~-~~~fD 225 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE-GDTYD 225 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-TTCEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-cccCC
Confidence 345699999999999998888875566899999999988888877654311 112357999999999886543 68899
Q ss_pred EEEEcCCCCC---C---Cccc--------------cCcHHHHHHHHhccCCCcEEEEeccchhh--hhhHHHHHHHHHHh
Q 019187 203 AVIVDSSDPI---G---PAQE--------------LFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVANCRQ 260 (345)
Q Consensus 203 vIi~D~~~p~---~---~~~~--------------l~t~ef~~~v~r~LkpgGvlv~~~~s~~~--~~~~~~~i~~~l~~ 260 (345)
.|++|++... + .... -...+.++...+.|||||+||-.++|... +...+..+++....
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~ 305 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 305 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCC
Confidence 9999988532 1 0000 01346788889999999999877766543 34556666655443
No 277
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.45 E-value=7.3e-07 Score=82.92 Aligned_cols=131 Identities=17% Similarity=0.199 Sum_probs=97.1
Q ss_pred HHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH
Q 019187 111 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV 190 (345)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~ 190 (345)
.|-.++..+ ++..+||+=+|+|.++.++++. ..+++.||.++..++..++++.. +.+++++..|+.
T Consensus 82 ~yf~~l~~~------n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~ 147 (283)
T 2oo3_A 82 EYISVIKQI------NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGV 147 (283)
T ss_dssp HHHHHHHHH------SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHH
T ss_pred HHHHHHHHh------cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHH
Confidence 455555442 4568999999999999999984 48999999999999999999863 468999999999
Q ss_pred hHHhhC--CCCCccEEEEcCCCCCCCccccCcHHHHHHHHh--ccCCCcEEEEeccchhhhhhHHHHHHHHHHhh
Q 019187 191 AFLKAV--PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAK--ALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (345)
Q Consensus 191 ~~l~~~--~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r--~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~ 261 (345)
.+++.. +..+||+|++|++-.... .+ ....+.+.+ .+.|+|++++.- |.........+.+.+++.
T Consensus 148 ~~L~~l~~~~~~fdLVfiDPPYe~k~---~~-~~vl~~L~~~~~r~~~Gi~v~WY--Pi~~~~~~~~~~~~l~~~ 216 (283)
T 2oo3_A 148 SKLNALLPPPEKRGLIFIDPSYERKE---EY-KEIPYAIKNAYSKFSTGLYCVWY--PVVNKAWTEQFLRKMREI 216 (283)
T ss_dssp HHHHHHCSCTTSCEEEEECCCCCSTT---HH-HHHHHHHHHHHHHCTTSEEEEEE--EESSHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCccEEEECCCCCCCc---HH-HHHHHHHHHhCccCCCeEEEEEE--eccchHHHHHHHHHHHhc
Confidence 988753 245799999998653211 11 233444433 567899999875 555566677788888654
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.45 E-value=2e-07 Score=94.81 Aligned_cols=133 Identities=11% Similarity=0.024 Sum_probs=85.5
Q ss_pred CCCceEEEEeccchHHHHHHHhcCC---------------CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSS---------------VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~---------------~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~ 189 (345)
+.+.+|||.+||+|+++..++++-. ..++.++|+|+.++++|+.++... +.. .++.+.++|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~-~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR--GID-FNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT--TCC-CBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh--CCC-cccceeccch
Confidence 3456999999999999888765310 347999999999999999876442 222 2344577886
Q ss_pred HhHHhhCCCCCccEEEEcCCCCCC---C----------------------ccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 190 VAFLKAVPEGTYDAVIVDSSDPIG---P----------------------AQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 190 ~~~l~~~~~~~yDvIi~D~~~p~~---~----------------------~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
..... ....+||+||++++-... . ...-....|++.+.+.|+|||++++-..+-
T Consensus 320 L~~~~-~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 320 FLDDQ-HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTSCS-CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred hcCcc-cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 54321 125789999998764321 0 000112369999999999999987655333
Q ss_pred hhhh--hHHHHHHHHHHhh
Q 019187 245 WLHM--HIIEDIVANCRQI 261 (345)
Q Consensus 245 ~~~~--~~~~~i~~~l~~~ 261 (345)
++.. .....+.+.+-+.
T Consensus 399 ~L~~~~~~~~~iRk~Lle~ 417 (544)
T 3khk_A 399 SMSSNTNNEGEIRKTLVEQ 417 (544)
T ss_dssp HHHCCGGGHHHHHHHHHHT
T ss_pred hhhcCcchHHHHHHHHHhC
Confidence 3222 2334444554443
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.44 E-value=1.3e-06 Score=88.77 Aligned_cols=134 Identities=13% Similarity=0.035 Sum_probs=89.7
Q ss_pred CCceEEEEeccchHHHHHHHhc---CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH-hhCCCCCc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH---SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL-KAVPEGTY 201 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~---~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l-~~~~~~~y 201 (345)
...+|||.+||+|+++..++++ ....++.++|+|+.++++|+.++-.. +...+++++.++|....- ......+|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH--GVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc--CCCcCccceEecceecccccccccccc
Confidence 4569999999999999888776 33568999999999999999876432 333357899999976431 11225789
Q ss_pred cEEEEcCCCCCC--Ccc-----------------ccCcHHHHHHHHhccC-CCcEEEEeccchhh-hhhHHHHHHHHHHh
Q 019187 202 DAVIVDSSDPIG--PAQ-----------------ELFEKPFFESVAKALR-PGGVVSTQAESIWL-HMHIIEDIVANCRQ 260 (345)
Q Consensus 202 DvIi~D~~~p~~--~~~-----------------~l~t~ef~~~v~r~Lk-pgGvlv~~~~s~~~-~~~~~~~i~~~l~~ 260 (345)
|+|+++++-... ... .-....|++.+.+.|+ +||++++-..+-++ .......+.+.+-+
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle 378 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLE 378 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHh
Confidence 999998764211 000 0012359999999999 99998765544333 22223444455444
Q ss_pred h
Q 019187 261 I 261 (345)
Q Consensus 261 ~ 261 (345)
.
T Consensus 379 ~ 379 (542)
T 3lkd_A 379 E 379 (542)
T ss_dssp T
T ss_pred C
Confidence 3
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.43 E-value=1.8e-06 Score=90.56 Aligned_cols=136 Identities=15% Similarity=0.101 Sum_probs=85.7
Q ss_pred CCceEEEEeccchHHHHHHHhcCC---CcEEEEEECCHHHHHHH--HhcccccccCCCCCCEEEEEechHhHHhhCCCCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSS---VEKIDICEIDKMVVDVS--KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~---~~~V~~VEid~~vi~~a--r~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~ 200 (345)
...+|||.|||+|+++..++++.+ ..+++++|||+.+++.| +.++.............+..+|....-.. ..++
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~-~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE-DFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG-GGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc-ccCC
Confidence 457999999999999999887642 35799999999999999 55443210000112245666665542111 2478
Q ss_pred ccEEEEcCCCCCC-C-ccc-----------------------cCcHHHHHHHHhccCCCcEEEEeccchhhh--hhHHHH
Q 019187 201 YDAVIVDSSDPIG-P-AQE-----------------------LFEKPFFESVAKALRPGGVVSTQAESIWLH--MHIIED 253 (345)
Q Consensus 201 yDvIi~D~~~p~~-~-~~~-----------------------l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~--~~~~~~ 253 (345)
||+||++++-... . ... -....|++.+.+.|++||.+++-..+-+.. ......
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 9999998765211 0 000 012458999999999999988866555542 223444
Q ss_pred HHHHHHhhc
Q 019187 254 IVANCRQIF 262 (345)
Q Consensus 254 i~~~l~~~F 262 (345)
+.+.+-+.+
T Consensus 480 LRk~LLe~~ 488 (878)
T 3s1s_A 480 FREFLVGNF 488 (878)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHHhCC
Confidence 445544443
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.37 E-value=6e-07 Score=93.90 Aligned_cols=114 Identities=15% Similarity=0.114 Sum_probs=77.3
Q ss_pred CCceEEEEeccchHHHHHHHhc-----C-------------------------------------CCcEEEEEECCHHHH
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH-----S-------------------------------------SVEKIDICEIDKMVV 163 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~-----~-------------------------------------~~~~V~~VEid~~vi 163 (345)
....|||.+||+|.++.+++.. | ...+|+++|+|+.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 4568999999999999997753 1 114799999999999
Q ss_pred HHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhc---cCCCcEEEEe
Q 019187 164 DVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKA---LRPGGVVSTQ 240 (345)
Q Consensus 164 ~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~---LkpgGvlv~~ 240 (345)
+.|++++... ++. ..+++..+|+.++......++||+||+|++-.......--..++|+.+.+. +.|||.+.+-
T Consensus 270 ~~A~~N~~~a--gv~-~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 270 QRARTNARLA--GIG-ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHT--TCG-GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHc--CCC-CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 9999987653 332 369999999887533221238999998876432111110124566665544 4479988775
Q ss_pred cc
Q 019187 241 AE 242 (345)
Q Consensus 241 ~~ 242 (345)
+.
T Consensus 347 t~ 348 (703)
T 3v97_A 347 SA 348 (703)
T ss_dssp ES
T ss_pred eC
Confidence 53
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.33 E-value=7.4e-07 Score=82.44 Aligned_cols=151 Identities=11% Similarity=0.076 Sum_probs=91.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||||.|+.+..+++..++.++.++++.-.+. .-+...... +.++..+.++... ...+.++||+|
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~dv--~~l~~~~~DlV 144 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKTDI--HRLEPVKCDTL 144 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSCCT--TTSCCCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEecccee--hhcCCCCccEE
Confidence 345689999999999999988876677888888874320 001110001 1133444554311 12346789999
Q ss_pred EEcCCCCCCCc--cccCcHHHHHHHHhccCCC-cEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCC--C
Q 019187 205 IVDSSDPIGPA--QELFEKPFFESVAKALRPG-GVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPS--G 279 (345)
Q Consensus 205 i~D~~~p~~~~--~~l~t~ef~~~v~r~Lkpg-Gvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~--g 279 (345)
++|.....+.. ...-+...++.+.+.|+|| |.|++..-.|+ ...+..+++.++..|. .|. ..-| ... .
T Consensus 145 lsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py--g~~~~~l~~~lk~~F~-~V~---~~KP-aSR~~S 217 (277)
T 3evf_A 145 LCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY--MPDVLEKLELLQRRFG-GTV---IRNP-LSRNST 217 (277)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT--SHHHHHHHHHHHHHHC-CEE---ECCT-TSCTTC
T ss_pred EecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC--CccHHHHHHHHHHhcC-CEE---EEeC-CCCCCC
Confidence 99986553321 1111223467888999999 99998542222 3456678899999994 342 3456 321 1
Q ss_pred cEEEEEEecCC
Q 019187 280 VIGFMLCSTEG 290 (345)
Q Consensus 280 ~w~~~~ask~~ 290 (345)
.-.|++|....
T Consensus 218 ~E~Y~V~~~r~ 228 (277)
T 3evf_A 218 HEMYYVSGARS 228 (277)
T ss_dssp CCEEEESSCCC
T ss_pred CceEEEEecCC
Confidence 23577776553
No 283
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.25 E-value=1e-06 Score=90.72 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=73.8
Q ss_pred CceEEEEeccchHHHHHHHhc---CC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 127 PKKVLVIGGGDGGVLREVSRH---SS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~---~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.+.|||||||+|-+....++. .. ..+|.+||.++. ...+++....+ +++ .+|+++.+|.+++ +. .++.|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N--~~~-dkVtVI~gd~eev--~L-PEKVD 430 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFE--EWG-SQVTVVSSDMREW--VA-PEKAD 430 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHH--TTG-GGEEEEESCTTTC--CC-SSCEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhc--cCC-CeEEEEeCcceec--cC-CcccC
Confidence 457999999999985554443 21 126899999985 45666654433 444 5899999998887 23 58999
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+||+....-....+.+ .+.+....|.|||||+++=+.
T Consensus 431 IIVSEwMG~fLl~E~m--levL~Ardr~LKPgGimiPs~ 467 (637)
T 4gqb_A 431 IIVSELLGSFADNELS--PECLDGAQHFLKDDGVSIPGE 467 (637)
T ss_dssp EEECCCCBTTBGGGCH--HHHHHHHGGGEEEEEEEESCE
T ss_pred EEEEEcCcccccccCC--HHHHHHHHHhcCCCcEEcccc
Confidence 9998765543332322 367777789999999986444
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.24 E-value=1e-06 Score=81.66 Aligned_cols=163 Identities=10% Similarity=0.035 Sum_probs=96.0
Q ss_pred hHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech
Q 019187 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (345)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~ 189 (345)
+--.|+.... + .....+|||||||.|+.+..+++..++.+|+++|+...+...+... ..+ +.++.....+.
T Consensus 77 fKL~ei~eK~-~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-----~~~-g~~ii~~~~~~ 147 (282)
T 3gcz_A 77 AKLRWMEERG-Y--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-----TTL-GWNLIRFKDKT 147 (282)
T ss_dssp HHHHHHHHTT-S--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-----CBT-TGGGEEEECSC
T ss_pred HHHHHHHHhc-C--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-----ccC-CCceEEeeCCc
Confidence 3334555443 2 2345699999999999999988765678899999975431111100 001 12233333221
Q ss_pred HhHHhhCCCCCccEEEEcCCCCCCCc--cccCcHHHHHHHHhccCCC--cEEEEeccchhhhhhHHHHHHHHHHhhcCCc
Q 019187 190 VAFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPG--GVVSTQAESIWLHMHIIEDIVANCRQIFKGS 265 (345)
Q Consensus 190 ~~~l~~~~~~~yDvIi~D~~~p~~~~--~~l~t~ef~~~v~r~Lkpg--Gvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~ 265 (345)
+ +...+.+++|+|++|.....+.. ...-+...++.+.+.|+|| |.||+-.-.++ ...+..+++.++..|. .
T Consensus 148 -d-v~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py--g~~~~~l~~~lk~~F~-~ 222 (282)
T 3gcz_A 148 -D-VFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY--TPLIMEELSRLQLKHG-G 222 (282)
T ss_dssp -C-GGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC--SHHHHHHHHHHHHHHC-C
T ss_pred -c-hhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC--CccHHHHHHHHHHhcC-C
Confidence 1 12234688999999987653332 1112234577778999999 99998532211 3556788899999994 3
Q ss_pred ceEEEEEEeecCC--CcEEEEEEecCC
Q 019187 266 VNYAWTTVPTYPS--GVIGFMLCSTEG 290 (345)
Q Consensus 266 v~~~~~~vP~y~~--g~w~~~~ask~~ 290 (345)
|. ..-| ... ..-.|++|....
T Consensus 223 V~---~~KP-aSR~~S~E~Y~V~~~r~ 245 (282)
T 3gcz_A 223 GL---VRVP-LSRNSTHEMYWVSGTRT 245 (282)
T ss_dssp EE---ECCT-TSCTTCCCEEEETTCCC
T ss_pred EE---EEcC-CCcccCcceeEEEecCC
Confidence 42 3456 321 123577776543
No 285
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.20 E-value=1.6e-06 Score=79.52 Aligned_cols=77 Identities=14% Similarity=0.201 Sum_probs=56.1
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH-HhhCC--CCCcc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF-LKAVP--EGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~-l~~~~--~~~yD 202 (345)
...+|||||||+|.++. +.+. ...+|++||+|+.+++.+++.+.. .++++++.+|+.++ +.+.. .+..|
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~~-~~~~v~avEid~~~~~~a~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~~ 92 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVGE-RLDQLTVIELDRDLAARLQTHPFL------GPKLTIYQQDAMTFNFGELAEKMGQPL 92 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHHT-TCSCEEEECCCHHHHHHHHTCTTT------GGGEEEECSCGGGCCHHHHHHHHTSCE
T ss_pred CcCEEEEECCCCcHHHH-hhhC-CCCeEEEEECCHHHHHHHHHHhcc------CCceEEEECchhhCCHHHhhcccCCce
Confidence 45689999999999999 6542 212399999999999999998753 25899999998774 22110 12357
Q ss_pred EEEEcCCC
Q 019187 203 AVIVDSSD 210 (345)
Q Consensus 203 vIi~D~~~ 210 (345)
.|+.+++.
T Consensus 93 ~vvsNlPY 100 (252)
T 1qyr_A 93 RVFGNLPY 100 (252)
T ss_dssp EEEEECCT
T ss_pred EEEECCCC
Confidence 88877653
No 286
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.19 E-value=2.9e-06 Score=79.04 Aligned_cols=76 Identities=21% Similarity=0.342 Sum_probs=56.5
Q ss_pred CCceEEEEeccchHHHHHHHhcCCC--cEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH-hhCCC-C--
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSV--EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL-KAVPE-G-- 199 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~--~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l-~~~~~-~-- 199 (345)
...+|||||||+|.++..+++.... .+|++||+|+.+++.+++.+ .++++++.+|+.++- .+... .
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--------~~~v~~i~~D~~~~~~~~~~~~~~~ 113 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--------GELLELHAGDALTFDFGSIARPGDE 113 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--------GGGEEEEESCGGGCCGGGGSCSSSS
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--------CCCcEEEECChhcCChhHhcccccC
Confidence 4679999999999999999987321 23999999999999999873 147999999998752 22111 1
Q ss_pred CccEEEEcCC
Q 019187 200 TYDAVIVDSS 209 (345)
Q Consensus 200 ~yDvIi~D~~ 209 (345)
..+.||.+++
T Consensus 114 ~~~~vv~NlP 123 (279)
T 3uzu_A 114 PSLRIIGNLP 123 (279)
T ss_dssp CCEEEEEECC
T ss_pred CceEEEEccC
Confidence 2346776654
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.17 E-value=4e-06 Score=86.67 Aligned_cols=110 Identities=18% Similarity=0.208 Sum_probs=75.3
Q ss_pred CceEEEEeccchHHHHHHHhc----C---------CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH
Q 019187 127 PKKVLVIGGGDGGVLREVSRH----S---------SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL 193 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~----~---------~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l 193 (345)
.+.|||||||+|.+...+++. . ...+|.+||.++..+...+.... .+++ .+|+++.+|.+++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~---Ng~~-d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV---RTWK-RRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH---HTTT-TCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh---cCCC-CeEEEEeCchhhcc
Confidence 457999999999996543222 1 13489999999976655554332 1444 48999999999884
Q ss_pred h---hCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 194 K---AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 194 ~---~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
. ....++.|+||+..-...+. .+| ..+.+..+.+.|+|||+++=+..
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~-nEL-~pe~Ld~v~r~Lkp~Gi~iP~~~ 535 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGD-NEL-SPECLDGVTGFLKPTTISIPQKY 535 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBG-GGS-HHHHHHTTGGGSCTTCEEESCEE
T ss_pred cccccCCCCcccEEEEeccccccc-hhc-cHHHHHHHHHhCCCCcEEECCcc
Confidence 3 11157899999876543222 122 35788888899999999875543
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.10 E-value=1.3e-05 Score=74.81 Aligned_cols=162 Identities=10% Similarity=0.076 Sum_probs=95.6
Q ss_pred HHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH
Q 019187 111 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV 190 (345)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~ 190 (345)
--.++... .++ ...++||||||+.|+.+..+++..++..|+++|+...... .+.....+...-+.+. .+ .
T Consensus 69 KL~ei~ek-~l~--~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-----~P~~~~~~~~~iv~~~-~~-~ 138 (300)
T 3eld_A 69 KIRWLHER-GYL--RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-----KPIHMQTLGWNIVKFK-DK-S 138 (300)
T ss_dssp HHHHHHHH-TSC--CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-----CCCCCCBTTGGGEEEE-CS-C
T ss_pred HHHHHHHh-CCC--CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-----ccccccccCCceEEee-cC-c
Confidence 33455554 333 4668999999999999999998766778999998643210 0100000011122222 11 1
Q ss_pred hHHhhCCCCCccEEEEcCCCCCCCc--cccCcHHHHHHHHhccCCC-cEEEEeccchhhhhhHHHHHHHHHHhhcCCcce
Q 019187 191 AFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPG-GVVSTQAESIWLHMHIIEDIVANCRQIFKGSVN 267 (345)
Q Consensus 191 ~~l~~~~~~~yDvIi~D~~~p~~~~--~~l~t~ef~~~v~r~Lkpg-Gvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~ 267 (345)
+.. ....+.+|+|++|.....+.. ...-+...++.+.+.|+|| |.||+-.-.++ ...+..++..++..|. .|.
T Consensus 139 di~-~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y--G~~~~~ll~~lk~~F~-~V~ 214 (300)
T 3eld_A 139 NVF-TMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY--HPDVIEKLERLQLRFG-GGI 214 (300)
T ss_dssp CTT-TSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT--SHHHHHHHHHHHHHHC-CEE
T ss_pred eee-ecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc--CccHHHHHHHHHHhCC-cEE
Confidence 211 223678999999987553321 1111234577778999999 99998532222 3456778899999994 342
Q ss_pred EEEEEEeecC--CCcEEEEEEecCC
Q 019187 268 YAWTTVPTYP--SGVIGFMLCSTEG 290 (345)
Q Consensus 268 ~~~~~vP~y~--~g~w~~~~ask~~ 290 (345)
..-| .. ...-.|++|....
T Consensus 215 ---~~KP-aSR~~S~E~Y~V~~~r~ 235 (300)
T 3eld_A 215 ---VRVP-FSRNSTHEMYYISGARN 235 (300)
T ss_dssp ---ECCT-TSCTTCCCEEEESSCCC
T ss_pred ---EEeC-CCCCCChHHeeeccCCC
Confidence 3456 32 1223577776553
No 289
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.06 E-value=2e-05 Score=81.74 Aligned_cols=115 Identities=18% Similarity=0.261 Sum_probs=84.9
Q ss_pred CceEEEEeccchHHHHHHHhcC----------C--CcEEEEEEC---CHHHHHHHHhccccc-----------cc-----
Q 019187 127 PKKVLVIGGGDGGVLREVSRHS----------S--VEKIDICEI---DKMVVDVSKQFFPDV-----------AV----- 175 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~----------~--~~~V~~VEi---d~~vi~~ar~~~~~~-----------~~----- 175 (345)
.-+|||+|.|+|......++.. . .-+++.+|. +++.+..+-..++.. ..
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999877765431 1 135889999 888777554443331 00
Q ss_pred ---CCCC--CCEEEEEechHhHHhhCC---CCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 176 ---GFED--PRVTLHIGDGVAFLKAVP---EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 176 ---~~~~--~rv~v~~~D~~~~l~~~~---~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
.+++ -+++++.+|+.+.+++.. ..+||+|++|.+.|.. .+.+++.++|+.++++++|||.+++.+.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~~~ 220 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLATFTS 220 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CGGGSCHHHHHHHHHHEEEEEEEEESCC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-ChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 0122 456799999999998753 3679999999988743 3569999999999999999999998653
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.06 E-value=1.9e-05 Score=73.44 Aligned_cols=84 Identities=19% Similarity=0.160 Sum_probs=66.4
Q ss_pred HHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH
Q 019187 113 QEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (345)
Q Consensus 113 ~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~ 192 (345)
.|++..+. ......+||++||.|+-++.+++. ..+|+++|.|+.+++.|++ +.. +|++++.+|..++
T Consensus 12 ~e~le~L~---~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~-------~rv~lv~~~f~~l 78 (285)
T 1wg8_A 12 QEALDLLA---VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL-------PGLTVVQGNFRHL 78 (285)
T ss_dssp HHHHHHHT---CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC-------TTEEEEESCGGGH
T ss_pred HHHHHhhC---CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc-------CCEEEEECCcchH
Confidence 45554432 234578999999999999999998 4589999999999999999 742 5999999998776
Q ss_pred ---HhhCCCCCccEEEEcCC
Q 019187 193 ---LKAVPEGTYDAVIVDSS 209 (345)
Q Consensus 193 ---l~~~~~~~yDvIi~D~~ 209 (345)
+.....+++|.|++|+.
T Consensus 79 ~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLG 98 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHcCCCCcCEEEeCCc
Confidence 55443468999999864
No 291
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.94 E-value=3e-05 Score=80.67 Aligned_cols=116 Identities=21% Similarity=0.276 Sum_probs=83.0
Q ss_pred CCceEEEEeccchHHHHHHHhcC--------C----CcEEEEEEC---CHHHHHHHHhcccccc----------------
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS--------S----VEKIDICEI---DKMVVDVSKQFFPDVA---------------- 174 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~--------~----~~~V~~VEi---d~~vi~~ar~~~~~~~---------------- 174 (345)
++-+|||+|.|+|.....+.+.. . ..+++.+|. +.+.+..+-+.+++..
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34689999999999887765531 1 146899999 4455544333333210
Q ss_pred ---cCCCC--CCEEEEEechHhHHhhCC---CCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 175 ---VGFED--PRVTLHIGDGVAFLKAVP---EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 175 ---~~~~~--~rv~v~~~D~~~~l~~~~---~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
..+++ -+++++.||+.+.+++.. ...+|+|++|.+.|... +.+++.++|+.+.++++|||.+++.+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~~ 212 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKN-PDMWNEQLFNAMARMTRPGGTFSTFTA 212 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--C-CTTCSHHHHHHHHHHEEEEEEEEESCC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCC-hhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 01223 267899999999998753 47899999999987543 468999999999999999999997653
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.70 E-value=0.00017 Score=65.97 Aligned_cols=138 Identities=17% Similarity=0.161 Sum_probs=82.8
Q ss_pred hHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCE---EEEE
Q 019187 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRV---TLHI 186 (345)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv---~v~~ 186 (345)
+--.|+-..- + .....+||||||+-|+....+++..++..|.+..+-... ...|.. ...+.+ ++..
T Consensus 60 yKL~EIdeK~-l--ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~---~~~~Gv~~i~~~~ 128 (269)
T 2px2_A 60 AKLRWLVERR-F--VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPML---MQSYGWNIVTMKS 128 (269)
T ss_dssp HHHHHHHHTT-S--CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCC---CCSTTGGGEEEEC
T ss_pred HHHHHHHHcC-C--CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCc---ccCCCceEEEeec
Confidence 3335555442 2 345679999999999999999887555455555443221 011110 001234 4444
Q ss_pred e-chHhHHhhCCCCCccEEEEcCCCCCCCc--cccCcHHHHHHHHhccCCCc-EEEEeccchhhhhhHHHHHHHHHHhhc
Q 019187 187 G-DGVAFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPGG-VVSTQAESIWLHMHIIEDIVANCRQIF 262 (345)
Q Consensus 187 ~-D~~~~l~~~~~~~yDvIi~D~~~p~~~~--~~l~t~ef~~~v~r~LkpgG-vlv~~~~s~~~~~~~~~~i~~~l~~~F 262 (345)
+ |..+ .+..++|+|++|.....+.. ...-+...+..+.+.|+||| .|++-.=. .....+.+.++.+++.|
T Consensus 129 G~Df~~----~~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq--g~~~~~~~~l~~lk~~F 202 (269)
T 2px2_A 129 GVDVFY----KPSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC--PYMPKVIEKLESLQRRF 202 (269)
T ss_dssp SCCGGG----SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC--TTSHHHHHHHHHHHHHH
T ss_pred cCCccC----CCCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC--CCchHHHHHHHHHHHHc
Confidence 6 8655 23568999999987653321 11112225666778999999 88875321 12256677888999999
Q ss_pred CC
Q 019187 263 KG 264 (345)
Q Consensus 263 ~~ 264 (345)
..
T Consensus 203 ~~ 204 (269)
T 2px2_A 203 GG 204 (269)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 293
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.65 E-value=0.00027 Score=71.50 Aligned_cols=133 Identities=16% Similarity=0.130 Sum_probs=81.7
Q ss_pred CCceEEEEeccchHHHHHHHhc----CC---------CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH----SS---------VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~----~~---------~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~ 192 (345)
...+|+|-.||+|+++..+.++ .. ...+.++|+++.+..+|+-++-.. +.+ ..++..+|...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh--g~~--~~~I~~~dtL~~ 292 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH--GLE--YPRIDPENSLRF 292 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH--TCS--CCEEECSCTTCS
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc--CCc--cccccccccccC
Confidence 3458999999999998877653 11 246999999999999999765432 222 346778886543
Q ss_pred H-hh-CCCCCccEEEEcCCCCCCC------------ccccCcHHHHHHHHhccC-------CCcEEEEeccc-hhhhhhH
Q 019187 193 L-KA-VPEGTYDAVIVDSSDPIGP------------AQELFEKPFFESVAKALR-------PGGVVSTQAES-IWLHMHI 250 (345)
Q Consensus 193 l-~~-~~~~~yDvIi~D~~~p~~~------------~~~l~t~ef~~~v~r~Lk-------pgGvlv~~~~s-~~~~~~~ 250 (345)
- .. ....+||+|+.+++-.... ...-....|++.+.+.|+ +||++++-..+ .+.....
T Consensus 293 ~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~ 372 (530)
T 3ufb_A 293 PLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGI 372 (530)
T ss_dssp CGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTH
T ss_pred chhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccch
Confidence 2 11 1235799999887642110 000112458888888886 79988765533 2222222
Q ss_pred HHHHHHHHHhhc
Q 019187 251 IEDIVANCRQIF 262 (345)
Q Consensus 251 ~~~i~~~l~~~F 262 (345)
-..+.+.+-+.+
T Consensus 373 ~~~iRk~Lle~~ 384 (530)
T 3ufb_A 373 SARIKEELLKNF 384 (530)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHhhcC
Confidence 233444444443
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.64 E-value=0.00043 Score=62.56 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=92.2
Q ss_pred hHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe-c
Q 019187 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG-D 188 (345)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~-D 188 (345)
+--.++.... +. ....+||||||+.|+....++...++.+|.++|+-+.-. ..|.+...+.-+.++++.+ |
T Consensus 65 ~KL~ei~ek~-~l--~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-----e~P~~~~s~gwn~v~fk~gvD 136 (267)
T 3p8z_A 65 AKLQWFVERN-MV--IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-----EEPVPMSTYGWNIVKLMSGKD 136 (267)
T ss_dssp HHHHHHHHTT-SS--CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-----CCCCCCCCTTTTSEEEECSCC
T ss_pred HHHHHHHHhc-CC--CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-----cCcchhhhcCcCceEEEeccc
Confidence 4445666554 22 345699999999999999998887888999999975432 1222222334457899988 8
Q ss_pred hHhHHhhCCCCCccEEEEcCCCCCCCc--cccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCC
Q 019187 189 GVAFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKG 264 (345)
Q Consensus 189 ~~~~l~~~~~~~yDvIi~D~~~p~~~~--~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~ 264 (345)
... + +...+|+|+||.....+.+ +.--+...++.+.+.|++ |-|++-.-+++. ++ +.+.++.++..|.+
T Consensus 137 v~~-~---~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~-p~-v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 137 VFY-L---PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM-PT-VIEHLERLQRKHGG 207 (267)
T ss_dssp GGG-C---CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS-HH-HHHHHHHHHHHHCC
T ss_pred eee-c---CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC-hh-HHHHHHHHHHHhCC
Confidence 522 2 2477999999987632221 111234477778899998 788876544432 22 34677888888843
No 295
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.57 E-value=0.00023 Score=68.59 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=55.1
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
....+|||||++.|+.+..++++. .+|++||+.+.--.+ ..+++|+++.+|+..+.. +.+.+|+|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~l~~~l-----------~~~~~V~~~~~d~~~~~~--~~~~~D~v 274 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRN--MWVYSVDNGPMAQSL-----------MDTGQVTWLREDGFKFRP--TRSNISWM 274 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--CEEEEECSSCCCHHH-----------HTTTCEEEECSCTTTCCC--CSSCEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCC--CEEEEEEhhhcChhh-----------ccCCCeEEEeCccccccC--CCCCcCEE
Confidence 346799999999999999999883 589999976421111 135799999999988754 25689999
Q ss_pred EEcCCC
Q 019187 205 IVDSSD 210 (345)
Q Consensus 205 i~D~~~ 210 (345)
++|...
T Consensus 275 vsDm~~ 280 (375)
T 4auk_A 275 VCDMVE 280 (375)
T ss_dssp EECCSS
T ss_pred EEcCCC
Confidence 999865
No 296
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.51 E-value=0.00043 Score=64.42 Aligned_cols=149 Identities=17% Similarity=0.215 Sum_probs=86.1
Q ss_pred hhHHHHHHHhcccc--cCCCCceEEEEec------cchHHHHHHHh-c-CCCcEEEEEECCHHHHHHHHhcccccccCCC
Q 019187 109 ECAYQEMITHLPLC--SIPNPKKVLVIGG------GDGGVLREVSR-H-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFE 178 (345)
Q Consensus 109 e~~Y~e~l~~l~l~--~~~~~~~VL~IG~------G~G~~~~~ll~-~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~ 178 (345)
...|.++...+--. ..|...+||++|+ -.|+. +++ . +....|+.+||.+-+.
T Consensus 90 v~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~---VLr~~~p~g~~VVavDL~~~~s--------------- 151 (344)
T 3r24_A 90 VAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA---VLRQWLPTGTLLVDSDLNDFVS--------------- 151 (344)
T ss_dssp HHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH---HHHHHSCTTCEEEEEESSCCBC---------------
T ss_pred HHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH---HHHHhCCCCcEEEEeeCccccc---------------
Confidence 35677766655222 2456789999996 45553 222 2 3234899999976431
Q ss_pred CCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCC-Cc--cc---c-CcHHHHHHHHhccCCCcEEEEeccchhhhhhHH
Q 019187 179 DPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIG-PA--QE---L-FEKPFFESVAKALRPGGVVSTQAESIWLHMHII 251 (345)
Q Consensus 179 ~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~-~~--~~---l-~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~ 251 (345)
+.. .++.+|...... .++||+||+|..+... .. .. . +-+..+.-+.+.|+|||.|++-. +.... .
T Consensus 152 da~-~~IqGD~~~~~~---~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV---FQGsg-~ 223 (344)
T 3r24_A 152 DAD-STLIGDCATVHT---ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI---TEHSW-N 223 (344)
T ss_dssp SSS-EEEESCGGGEEE---SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE---CSSSC-C
T ss_pred CCC-eEEEcccccccc---CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE---ecCCC-H
Confidence 122 348999765322 5889999999876542 21 11 1 23455666788999999999854 22222 1
Q ss_pred HHHHHHHHhhcCCcceEEEEEEeec-CCCcEEEEEEec
Q 019187 252 EDIVANCRQIFKGSVNYAWTTVPTY-PSGVIGFMLCST 288 (345)
Q Consensus 252 ~~i~~~l~~~F~~~v~~~~~~vP~y-~~g~w~~~~ask 288 (345)
+.+..+++.| ..|.... |+- ....-.|++|..
T Consensus 224 -~~L~~lrk~F-~~VK~fK---~ASRa~SsEvYLVG~g 256 (344)
T 3r24_A 224 -ADLYKLMGHF-SWWTAFV---TNVNASSSEAFLIGAN 256 (344)
T ss_dssp -HHHHHHHTTE-EEEEEEE---EGGGTTSSCEEEEEEE
T ss_pred -HHHHHHHhhC-CeEEEEC---CCCCCCCeeEEEEeee
Confidence 3345566788 3343331 221 122235777764
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.41 E-value=0.00058 Score=63.54 Aligned_cols=144 Identities=15% Similarity=0.183 Sum_probs=90.6
Q ss_pred cchhHHHHHHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE
Q 019187 107 RDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI 186 (345)
Q Consensus 107 ~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~ 186 (345)
+..+-..++.... + .....+||||||+.|+....++...++.+|.++|+-..-. ..|.+-..+.-.-|.++.
T Consensus 78 R~~~KL~ei~~~~-~--l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~h-----e~P~~~~ql~w~lV~~~~ 149 (321)
T 3lkz_A 78 RGTAKLRWLVERR-F--LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGH-----EEPQLVQSYGWNIVTMKS 149 (321)
T ss_dssp THHHHHHHHHHTT-S--CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTS-----CCCCCCCBTTGGGEEEEC
T ss_pred hHHHHHHHHHHhc-C--CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCc-----cCcchhhhcCCcceEEEe
Confidence 3334445666552 2 2345699999999999999988887888999999965421 111111112223467776
Q ss_pred e-chHhHHhhCCCCCccEEEEcCCCCCCCc--cccCcHHHHHHHHhccCCC-cEEEEeccchhhhhhHHHHHHHHHHhhc
Q 019187 187 G-DGVAFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPG-GVVSTQAESIWLHMHIIEDIVANCRQIF 262 (345)
Q Consensus 187 ~-D~~~~l~~~~~~~yDvIi~D~~~p~~~~--~~l~t~ef~~~v~r~Lkpg-Gvlv~~~~s~~~~~~~~~~i~~~l~~~F 262 (345)
+ |.+ ++. ...+|+|+||.....+.+ +.--+...++.+.+.|++| |-|++-.-+++. ..+.+.++.|+..|
T Consensus 150 ~~Dv~-~l~---~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~--~~v~e~l~~lq~~f 223 (321)
T 3lkz_A 150 GVDVF-YRP---SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM--PKVIEKMELLQRRY 223 (321)
T ss_dssp SCCTT-SSC---CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS--HHHHHHHHHHHHHH
T ss_pred ccCHh-hCC---CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC--hHHHHHHHHHHHHh
Confidence 6 643 232 467999999987433221 1111334677778889998 888886544432 33447788888888
Q ss_pred CC
Q 019187 263 KG 264 (345)
Q Consensus 263 ~~ 264 (345)
.+
T Consensus 224 gg 225 (321)
T 3lkz_A 224 GG 225 (321)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 298
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.35 E-value=0.00065 Score=65.86 Aligned_cols=109 Identities=13% Similarity=-0.032 Sum_probs=69.5
Q ss_pred CceEEEEeccchHHHHHHHhc-----------------CCCcEEEEEECC-----------HHHHHHHHhcccccccCCC
Q 019187 127 PKKVLVIGGGDGGVLREVSRH-----------------SSVEKIDICEID-----------KMVVDVSKQFFPDVAVGFE 178 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~-----------------~~~~~V~~VEid-----------~~vi~~ar~~~~~~~~~~~ 178 (345)
+-+|+|+||++|..+..+... ++.-+|...|+- +...+.+++... .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC------C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc------C
Confidence 678999999999988775543 234567777776 444433333211 1
Q ss_pred CCCEEEEEechHhHHhhC-CCCCccEEEEcCCCCCCCc--cccC--------------------------c-------HH
Q 019187 179 DPRVTLHIGDGVAFLKAV-PEGTYDAVIVDSSDPIGPA--QELF--------------------------E-------KP 222 (345)
Q Consensus 179 ~~rv~v~~~D~~~~l~~~-~~~~yDvIi~D~~~p~~~~--~~l~--------------------------t-------~e 222 (345)
..+--++.+.+..|-... +++++|+|++...-+|... ..+. . ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 113356677776665433 6789999999877666321 1111 0 12
Q ss_pred HHHHHHhccCCCcEEEEec
Q 019187 223 FFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 223 f~~~v~r~LkpgGvlv~~~ 241 (345)
|++..++.|+|||.+++..
T Consensus 207 FL~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhccCCeEEEEE
Confidence 5777799999999999876
No 299
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.31 E-value=0.00023 Score=68.32 Aligned_cols=59 Identities=14% Similarity=0.060 Sum_probs=50.2
Q ss_pred CceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~ 192 (345)
...|||||.|.|.+++.|++.....+|++||+|+..+...++.+ . .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c------CCCEEEEECCccch
Confidence 46899999999999999998633468999999999999988865 2 35899999999766
No 300
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.29 E-value=0.00051 Score=66.39 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=71.6
Q ss_pred CCCceEEEEeccchHHHHHHH--------hc-------CCCcEEEEEECCHHHHHHHHhcccccccCC--------CCCC
Q 019187 125 PNPKKVLVIGGGDGGVLREVS--------RH-------SSVEKIDICEIDKMVVDVSKQFFPDVAVGF--------EDPR 181 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll--------~~-------~~~~~V~~VEid~~vi~~ar~~~~~~~~~~--------~~~r 181 (345)
+.+-+|+|+|||+|..+..+. ++ ++.-+|...|+-..-....-+.++.....+ ...+
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 456799999999999877761 11 244578888876544333323333321100 0112
Q ss_pred EEEEEechHhHHhh-CCCCCccEEEEcCCCCCCC--cccc-------------------------Cc-------HHHHHH
Q 019187 182 VTLHIGDGVAFLKA-VPEGTYDAVIVDSSDPIGP--AQEL-------------------------FE-------KPFFES 226 (345)
Q Consensus 182 v~v~~~D~~~~l~~-~~~~~yDvIi~D~~~p~~~--~~~l-------------------------~t-------~ef~~~ 226 (345)
--++.+.+..|-.. .+++++|+|++...-+|.. +..+ |. ..|++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 23556666555332 3678999999987777643 1111 11 236888
Q ss_pred HHhccCCCcEEEEec
Q 019187 227 VAKALRPGGVVSTQA 241 (345)
Q Consensus 227 v~r~LkpgGvlv~~~ 241 (345)
.++.|+|||.+++..
T Consensus 211 ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEE
Confidence 899999999999866
No 301
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.20 E-value=0.0019 Score=59.25 Aligned_cols=141 Identities=16% Similarity=0.087 Sum_probs=86.3
Q ss_pred CCCceEEEEeccchHHHHHHHhc-------CCCcEEEEEE-----CCHH-----------------------HHHHH--H
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRH-------SSVEKIDICE-----IDKM-----------------------VVDVS--K 167 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~-------~~~~~V~~VE-----id~~-----------------------vi~~a--r 167 (345)
.-|..|+++|+--|+.+..++.. ....+|.++| ..+. +-++. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 45789999999999988775441 2357899998 2210 11111 1
Q ss_pred hcccccccCCCCCCEEEEEechHhHHhh----CCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 168 QFFPDVAVGFEDPRVTLHIGDGVAFLKA----VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 168 ~~~~~~~~~~~~~rv~v~~~D~~~~l~~----~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+++... +..+.+++++.|++.+.+.. .+.+++|+|.+|... .. -+...|+.+...|+|||++++.-..
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~----~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YE----PTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HH----HHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cc----hHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 111111 22247999999999887654 345679999999841 11 1467899999999999999986421
Q ss_pred hhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecCC
Q 019187 244 IWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPS 278 (345)
Q Consensus 244 ~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~~ 278 (345)
....+ ...+.+.+.+.. ...-....|++|.
T Consensus 220 ~~~w~----G~~~A~~ef~~~-~~~~i~~~p~~~~ 249 (257)
T 3tos_A 220 NPKWP----GENIAMRKVLGL-DHAPLRLLPGRPA 249 (257)
T ss_dssp CTTCT----HHHHHHHHHTCT-TSSCCEECTTCSC
T ss_pred CCCCh----HHHHHHHHHHhh-CCCeEEEccCCCC
Confidence 10111 233445555522 2222355677764
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.14 E-value=0.0014 Score=62.34 Aligned_cols=75 Identities=20% Similarity=0.215 Sum_probs=59.1
Q ss_pred CCceEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH---hhCC-CCC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL---KAVP-EGT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l---~~~~-~~~ 200 (345)
....++|..+|.|+-++.+++. .+..+|+++|.|+.+++.++ .+ .+.|++++.++..++. .... .++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-------~~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-------DDPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-------CCTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-------cCCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 3568999999999999999987 45679999999999999995 34 2469999999876653 3321 136
Q ss_pred ccEEEEcC
Q 019187 201 YDAVIVDS 208 (345)
Q Consensus 201 yDvIi~D~ 208 (345)
+|.|+.|+
T Consensus 129 vDgILfDL 136 (347)
T 3tka_A 129 IDGILLDL 136 (347)
T ss_dssp EEEEEEEC
T ss_pred ccEEEECC
Confidence 99999976
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.09 E-value=0.0046 Score=58.87 Aligned_cols=151 Identities=11% Similarity=0.138 Sum_probs=89.5
Q ss_pred CceEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCccEE
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAV 204 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~-~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~yDvI 204 (345)
+.+|||+.||.|++...+.+..- ...|.++|+|+..++..+.+++. ..++.+|..++... .+...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcCcCCcCEE
Confidence 45899999999999999887631 35799999999999999998863 23677887765421 111269999
Q ss_pred EEcCCCCC-CCc---c-------ccCcHHHHHHHHhccC--CCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEE
Q 019187 205 IVDSSDPI-GPA---Q-------ELFEKPFFESVAKALR--PGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWT 271 (345)
Q Consensus 205 i~D~~~p~-~~~---~-------~l~t~ef~~~v~r~Lk--pgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~ 271 (345)
+.+++... ..+ . .|+ .+++ .+.+.++ |.-+++=|.... .....+..+++.+++. .-.+.+...
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l~-~~~~-~~i~~~~~~P~~~~~ENV~~l-~~~~~~~~i~~~l~~~-GY~v~~~vl 148 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNSF-LHIL-DILPRLQKLPKYILLENVKGF-EVSSTRDLLIQTIENC-GFQYQEFLL 148 (343)
T ss_dssp EECCC------------------CHH-HHHH-HHGGGCSSCCSEEEEEEETTG-GGSHHHHHHHHHHHHT-TEEEEEEEE
T ss_pred EEcCCCcchhhcCCcCCccCccchHH-HHHH-HHHHHhcCCCCEEEEeCCccc-cCHHHHHHHHHHHHHC-CCeeEEEEE
Confidence 99876321 111 0 111 1333 3445677 877776555332 2345566677777653 111211112
Q ss_pred EEeecCC---CcEEEEEEecCC
Q 019187 272 TVPTYPS---GVIGFMLCSTEG 290 (345)
Q Consensus 272 ~vP~y~~---g~w~~~~ask~~ 290 (345)
..-.|.- =.-.|+++.+..
T Consensus 149 ~a~~~GvPQ~R~R~~iv~~~~~ 170 (343)
T 1g55_A 149 SPTSLGIPNSRLRYFLIAKLQS 170 (343)
T ss_dssp CGGGGTCSCCCCEEEEEEEESS
T ss_pred EHHHCCCCCcccEEEEEEEeCC
Confidence 2222311 135788888764
No 304
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.99 E-value=0.00093 Score=64.22 Aligned_cols=115 Identities=14% Similarity=0.081 Sum_probs=77.3
Q ss_pred CCCCceEEEEeccchHHHHHHHhc----------------CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe
Q 019187 124 IPNPKKVLVIGGGDGGVLREVSRH----------------SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG 187 (345)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~ll~~----------------~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~ 187 (345)
.+++-+|+|+||++|..+..+... ++.-+|...|+-..-....-+.++... ...+--++.+
T Consensus 49 ~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~g 125 (359)
T 1m6e_X 49 VTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFING 125 (359)
T ss_dssp SSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEE
T ss_pred CCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEe
Confidence 355678999999999765543222 344578899988777777767666431 1113466777
Q ss_pred chHhHHhhC-CCCCccEEEEcCCCCCCCc--cc--------------------cCc-------HHHHHHHHhccCCCcEE
Q 019187 188 DGVAFLKAV-PEGTYDAVIVDSSDPIGPA--QE--------------------LFE-------KPFFESVAKALRPGGVV 237 (345)
Q Consensus 188 D~~~~l~~~-~~~~yDvIi~D~~~p~~~~--~~--------------------l~t-------~ef~~~v~r~LkpgGvl 237 (345)
.+..|-... +++++|+|++...-+|... .. .|. ..|++..++.|+|||.+
T Consensus 126 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 126 VPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp EESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred cchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 777664432 6789999998776655321 01 232 24688889999999999
Q ss_pred EEec
Q 019187 238 STQA 241 (345)
Q Consensus 238 v~~~ 241 (345)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 305
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.94 E-value=0.0011 Score=61.84 Aligned_cols=46 Identities=20% Similarity=0.078 Sum_probs=40.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD 172 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~ 172 (345)
.....|||++||+|.++.++++. ..++++||+++.+++.|++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHH
Confidence 34579999999999999998887 46899999999999999998764
No 306
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.91 E-value=0.00032 Score=58.86 Aligned_cols=79 Identities=15% Similarity=0.125 Sum_probs=51.0
Q ss_pred CCceEEEEeccch-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGDG-GVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~G-~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.+.+||+||||.| .++..|+++. ...|+++||++..++ ++.+|.++-..+. -+.||+|
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av~-------------------~v~dDiF~P~~~~-Y~~~DLI 93 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHGG-------------------IVRDDITSPRMEI-YRGAALI 93 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSSTT-------------------EECCCSSSCCHHH-HTTEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccccc-------------------eEEccCCCCcccc-cCCcCEE
Confidence 4679999999999 6999998753 357999999987655 4445554422211 1479999
Q ss_pred E-EcCCCCCCCccccCcHHHHHHHHhccCC
Q 019187 205 I-VDSSDPIGPAQELFEKPFFESVAKALRP 233 (345)
Q Consensus 205 i-~D~~~p~~~~~~l~t~ef~~~v~r~Lkp 233 (345)
. +.++ .+| ...+..+++...-
T Consensus 94 YsirPP------~El--~~~i~~lA~~v~a 115 (153)
T 2k4m_A 94 YSIRPP------AEI--HSSLMRVADAVGA 115 (153)
T ss_dssp EEESCC------TTT--HHHHHHHHHHHTC
T ss_pred EEcCCC------HHH--HHHHHHHHHHcCC
Confidence 5 3332 222 3455566655543
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.78 E-value=0.0019 Score=61.60 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=66.5
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... -+.....|..+-+.+...+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-------vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH-------VINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCE-------EecCCccCHHHHHHHhcCCCCcE
Confidence 3467999999876 777778888765557999999999999998742110 01100123333343322347999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+-... ..+.++.+.++|+++|.+++-.
T Consensus 262 vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTG----------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSC----------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHHhcCCEEEEeC
Confidence 883322 1357889999999999998754
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.70 E-value=0.049 Score=51.40 Aligned_cols=147 Identities=16% Similarity=0.132 Sum_probs=93.4
Q ss_pred CceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
..+||||.||.|++...+.+. +...+.++|+|+..++..+.+++.. . .+|..++.... -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~-~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKT-IPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGG-SCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhh-CCCCCEEEE
Confidence 468999999999999998877 4677899999999999999988642 1 58877765432 246999999
Q ss_pred cCCCCC-CCc----------cccCcHHHHHHHHhccCCCcEEEEeccchhhh--hhHHHHHHHHHHhhcCCcceEEEEEE
Q 019187 207 DSSDPI-GPA----------QELFEKPFFESVAKALRPGGVVSTQAESIWLH--MHIIEDIVANCRQIFKGSVNYAWTTV 273 (345)
Q Consensus 207 D~~~p~-~~~----------~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~--~~~~~~i~~~l~~~F~~~v~~~~~~v 273 (345)
+++... ..+ ..|+ .++++ +.+.++|.-+++=|....... ...+..+++.+++. .-.+.+.....
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~-~~~~r-~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~-GY~v~~~vl~a 154 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLF-FDIAR-IVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNEL-DYSFHAKVLNA 154 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHH-HHHHH-HHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHT-TBCCEEEEEEG
T ss_pred CCCCCCcchhcccCCCcchhhHHH-HHHHH-HHHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhC-CCEEEEEEEEH
Confidence 876432 111 1121 24444 344579987777676443322 24566777777653 12233332333
Q ss_pred eecCCC---cEEEEEEecC
Q 019187 274 PTYPSG---VIGFMLCSTE 289 (345)
Q Consensus 274 P~y~~g---~w~~~~ask~ 289 (345)
-.|..- .-.|+++.+.
T Consensus 155 ~~~GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 155 LDYGIPQKRERIYMICFRN 173 (327)
T ss_dssp GGGTCSBCCEEEEEEEEBG
T ss_pred HHcCCCccceEEEEEEEeC
Confidence 344211 2478888765
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.62 E-value=0.0046 Score=58.20 Aligned_cols=98 Identities=20% Similarity=0.328 Sum_probs=68.2
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-... -+.....|..+.+.+. .+.+|+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~-------~i~~~~~~~~~~~~~~-~g~~d~ 235 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEV-------AVNARDTDPAAWLQKE-IGGAHG 235 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHH-HSSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCE-------EEeCCCcCHHHHHHHh-CCCCCE
Confidence 3567999999876 8888888888655 8999999999999998742110 0111112444444432 347999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+.... ..+.++.+.++|+++|.++.-.
T Consensus 236 vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 236 VLVTAV----------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEeCC----------CHHHHHHHHHHhccCCEEEEeC
Confidence 985532 2367889999999999998754
No 310
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.59 E-value=0.0055 Score=58.16 Aligned_cols=97 Identities=16% Similarity=0.141 Sum_probs=65.2
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe------chHhHHhhCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG------DGVAFLKAVP 197 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~------D~~~~l~~~~ 197 (345)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. + .++.. |..+-+.+..
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~---~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-------D---LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------S---EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-------C---EEEcCcccccchHHHHHHHHh
Confidence 3567999999876 7777788887666689999999998899886421 1 12221 2222222211
Q ss_pred CCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 198 EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 198 ~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.+.+|+||-.... ...++.+.++|+++|.++.-.
T Consensus 240 ~~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTGA----------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCC----------hHHHHHHHHHhcCCCEEEEEe
Confidence 2569998843321 356788899999999998754
No 311
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.54 E-value=0.011 Score=57.04 Aligned_cols=149 Identities=15% Similarity=0.143 Sum_probs=90.9
Q ss_pred ceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh------CCCCCc
Q 019187 128 KKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA------VPEGTY 201 (345)
Q Consensus 128 ~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~------~~~~~y 201 (345)
-+|+||-||.|++...+.+. +...|.+||+|+..++..+.+++ ...++.+|..++..+ .....+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 47999999999999998877 46678899999999999998875 346778887665321 124679
Q ss_pred cEEEEcCCCCC-CCc---------cccCcHHHHHHHHhccCCCcEEEEeccchhh--hhhHHHHHHHHHHhhcCCcc-eE
Q 019187 202 DAVIVDSSDPI-GPA---------QELFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVANCRQIFKGSV-NY 268 (345)
Q Consensus 202 DvIi~D~~~p~-~~~---------~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~--~~~~~~~i~~~l~~~F~~~v-~~ 268 (345)
|+|+.+++... ..+ ..|+ .+|++ +.+.++|.-+++=|...... ....+..++ .+.+. .-.+ .+
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L~-~~~~~-~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~-GY~v~~~ 148 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQLY-MHFYR-LVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSG-DYDILDP 148 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHHH-HHHHH-HHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHT-TEEECCC
T ss_pred eEEEecCCCCCcccccCCCCCCchHHHH-HHHHH-HHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcC-CCccCcE
Confidence 99998877432 111 1121 23333 44567898887767644432 223455666 55543 0112 22
Q ss_pred EEEEEeecCCC---cEEEEEEecCC
Q 019187 269 AWTTVPTYPSG---VIGFMLCSTEG 290 (345)
Q Consensus 269 ~~~~vP~y~~g---~w~~~~ask~~ 290 (345)
.....-.|.-- .-.|++|++..
T Consensus 149 ~vl~a~dyGvPQ~R~R~~iig~r~~ 173 (376)
T 3g7u_A 149 IKVKASDYGAPTIRTRYFFIGVKKS 173 (376)
T ss_dssp EEEEGGGGTCSBCCEEEEEEEEEGG
T ss_pred EEEEHhhCCCCCCCcEEEEEEEeCC
Confidence 22232334111 24788887653
No 312
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.53 E-value=0.0041 Score=59.50 Aligned_cols=100 Identities=17% Similarity=0.224 Sum_probs=68.5
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh---CCCCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA---VPEGT 200 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~---~~~~~ 200 (345)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... -+.....|..+.+.+ ...+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-------vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA-------TVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE-------EECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE-------EECCCCcCHHHHHHhhhhccCCC
Confidence 4567999999876 677777888876669999999999999998742110 011111344445543 22357
Q ss_pred ccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+|+-... ..+.++.+.++|+++|.+++-.
T Consensus 254 ~Dvvid~~G----------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAG----------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCC----------CHHHHHHHHHHhccCCEEEEEe
Confidence 999883322 1367889999999999998754
No 313
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.52 E-value=0.012 Score=55.91 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=68.4
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-----echHhHHhhC-C
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAV-P 197 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-----~D~~~~l~~~-~ 197 (345)
...++||++|+|. |..+..+++..+...|++++.+++-.+.+++. .. .-+.+.. .|..+.+.+. .
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-------~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-------EVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-------TCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-------hcccccccccchHHHHHHHHHHhC
Confidence 4567999999866 77778888887666699999999999999986 31 1222221 2333333332 2
Q ss_pred CCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 198 EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 198 ~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
...+|+|+-... ....++.+.++|+++|.++.-.
T Consensus 250 g~g~Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTG----------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCC----------ChHHHHHHHHHhcCCCEEEEEc
Confidence 457999884322 1357889999999999998754
No 314
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.49 E-value=0.0034 Score=59.42 Aligned_cols=100 Identities=20% Similarity=0.221 Sum_probs=66.7
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCcc
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~yD 202 (345)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... -+.....|..+.+.+. ....+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-------vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD-------IINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE-------EECGGGSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce-------EEcCCCcCHHHHHHHHcCCCCCC
Confidence 4567999999876 677778888876668999999999889998742110 0001112333444332 234699
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+-.... .+.++.+.++|+++|.++.-.
T Consensus 238 ~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 238 KVVIAGGD----------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEECSSC----------TTHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCC----------hHHHHHHHHHHhcCCEEEEec
Confidence 99843222 146788899999999998743
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.29 E-value=0.0044 Score=58.45 Aligned_cols=67 Identities=19% Similarity=0.301 Sum_probs=50.4
Q ss_pred CCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCcc----------ccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 178 EDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQ----------ELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 178 ~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~----------~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
...+.+++++|+.+.++..+++++|+|++|++-...... ..+..+.++.++++|+|||.+++.....
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 456789999999999887767899999999875432110 0123577888999999999999976543
No 316
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.21 E-value=0.0065 Score=58.11 Aligned_cols=100 Identities=15% Similarity=0.145 Sum_probs=66.9
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEE--EechHhHHhhCCCCCc
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH--IGDGVAFLKAVPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~~y 201 (345)
....+||++|+|. |..+..+++..+..+|+++|.+++-++.+++. .. + .-+... ..|..+.+++...+.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l-Ga-----~-~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF-GV-----N-EFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT-TC-----C-EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CC-----c-EEEccccCchhHHHHHHHhcCCCC
Confidence 3567999999865 66777788876666899999999999998874 21 0 000000 1233444444324589
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCC-cEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkpg-Gvlv~~~ 241 (345)
|+|+-... ..+.++.+.++|+++ |.+++-.
T Consensus 265 D~vid~~g----------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIG----------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSC----------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCC----------CHHHHHHHHHHhhccCCEEEEEc
Confidence 99884322 136788999999997 9998754
No 317
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.17 E-value=0.0072 Score=56.99 Aligned_cols=65 Identities=15% Similarity=0.220 Sum_probs=48.8
Q ss_pred CCCEEEE-EechHhHHhhCCCCCccEEEEcCCCCCCC------c-cccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 179 DPRVTLH-IGDGVAFLKAVPEGTYDAVIVDSSDPIGP------A-QELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 179 ~~rv~v~-~~D~~~~l~~~~~~~yDvIi~D~~~p~~~------~-~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+...+++ ++|+.++++..+++++|+|++|++-.... . ..-+..+.+..++++|+|||.+++....
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 3457788 99999999877678999999998754431 0 0012357788889999999999997654
No 318
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.16 E-value=0.0072 Score=58.25 Aligned_cols=109 Identities=10% Similarity=0.081 Sum_probs=66.3
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech-HhHHhhC-CCCCc
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG-VAFLKAV-PEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~-~~~l~~~-~~~~y 201 (345)
....+||++|+|. |..+..+++..+..+|++++.+++-++.++++ .. + -+.....|. .+.+.+. ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~-~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-GF------E-TIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-TC------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CC------c-EEcCCCcchHHHHHHHHhCCCCC
Confidence 3467999999876 77788888876555899999999999998764 21 0 111111232 3333322 23369
Q ss_pred cEEEEcCCCCCC-C-c--cccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIG-P-A--QELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~-~-~--~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||-....+.. . . ..+-....++.+.++|+++|.+++-.
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 998844322210 0 0 00001246788899999999998643
No 319
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.09 E-value=0.035 Score=45.19 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=62.1
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCccE
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYDA 203 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~yDv 203 (345)
..+|+++|+|. |......++.. ..+|+++|.|++.++.+++. .+.++.+|+.+ .++...-...|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRER-----------GVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHHHHHhcCcccCCE
Confidence 35899999986 33333333332 35899999999988877652 35678888743 455432367899
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
|++-..+.. .....-...+.+.|+..++....+
T Consensus 75 vi~~~~~~~-------~n~~~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 75 LILTIPNGY-------EAGEIVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHHCSSSEEEEEESS
T ss_pred EEEECCChH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 997655421 112233456667888887776544
No 320
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.03 E-value=0.023 Score=53.36 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=67.5
Q ss_pred CCCceEEEEeccch-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCcc
Q 019187 125 PNPKKVLVIGGGDG-GVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~G-~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~yD 202 (345)
....+||++|+|.+ +++..+++.....+|++++.+++-.+.+++.-.. .-+.....|..+.+.+. ....+|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~-------~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD-------VTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS-------EEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe-------EEEeCCCCCHHHHhhhhcCCCCce
Confidence 34579999998874 4555566655567999999999988888875322 12222334555545443 234578
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+++.+... ...+....+.|+++|.+++..
T Consensus 235 ~~~~~~~~----------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAVA----------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCSC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEeccC----------cchhheeheeecCCceEEEEe
Confidence 88766542 467888999999999998754
No 321
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.01 E-value=0.015 Score=54.71 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=66.1
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE--echHhHHhhC-CCCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI--GDGVAFLKAV-PEGT 200 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~--~D~~~~l~~~-~~~~ 200 (345)
....+||++|+|. |..+..+++..+..+|+++|.+++-.+.+++.-.. .++. .|..+.+.+. ....
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~----------~~i~~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD----------AAVKSGAGAADAIRELTGGQG 239 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS----------EEEECSTTHHHHHHHHHGGGC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC----------EEEcCCCcHHHHHHHHhCCCC
Confidence 4567999999866 67777788875567999999999999999874211 1111 1233333322 1347
Q ss_pred ccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+|+-... ....++.+.++|+++|.++.-.
T Consensus 240 ~d~v~d~~G----------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 240 ATAVFDFVG----------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CeEEEECCC----------CHHHHHHHHHHHhcCCEEEEEC
Confidence 998884322 1357899999999999998753
No 322
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.00 E-value=0.0062 Score=55.44 Aligned_cols=61 Identities=15% Similarity=0.231 Sum_probs=46.4
Q ss_pred CEEEEEechHhHHhhCCCCCccEEEEcCCCCCC-Cccc---------cCcHHHHHHHHhccCCCcEEEEec
Q 019187 181 RVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIG-PAQE---------LFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 181 rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~-~~~~---------l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
..+++++|+.++++..+++++|+|++|++-... .... -+..++++.++++|+|||.+++..
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 346899999999988767899999999876443 1110 133567888899999999998864
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.99 E-value=0.012 Score=50.51 Aligned_cols=98 Identities=12% Similarity=0.052 Sum_probs=60.4
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
...++||++|+ |.|..+..+++..+ .+|++++.+++..+.+++. .. +..+.....|..+.+.+ .....+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-GV------EYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-CC------SEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEeeCCcHHHHHHHHHHhCCCCC
Confidence 34678999994 44666666666544 4899999999888777653 11 10011111222233322 223469
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|+.... . +.++.+.++|+++|.++.-.
T Consensus 109 D~vi~~~g----~-------~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSLA----G-------EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECCC----T-------HHHHHHHHTEEEEEEEEECS
T ss_pred eEEEECCc----h-------HHHHHHHHHhccCCEEEEEc
Confidence 99985432 1 46788999999999998743
No 324
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.97 E-value=0.017 Score=54.67 Aligned_cols=94 Identities=15% Similarity=0.133 Sum_probs=62.3
Q ss_pred ceEEEEeccc-hHHH-HHHH-hcCCCcEEEEEECCHH---HHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCc
Q 019187 128 KKVLVIGGGD-GGVL-REVS-RHSSVEKIDICEIDKM---VVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (345)
Q Consensus 128 ~~VL~IG~G~-G~~~-~~ll-~~~~~~~V~~VEid~~---vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~y 201 (345)
++||++|+|. |..+ ..++ +..+..+|++++.+++ -.+.+++.-.. .+.....|..+ +.+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~--------~v~~~~~~~~~-i~~~-~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT--------YVDSRQTPVED-VPDV-YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE--------EEETTTSCGGG-HHHH-SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc--------ccCCCccCHHH-HHHh-CCCC
Confidence 7999999754 6667 7888 8766656999999987 78888763211 11000123334 4433 3479
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||-... ....++.+.++|+++|.++.-.
T Consensus 244 Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 244 DFIYEATG----------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEEECSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCC----------ChHHHHHHHHHHhcCCEEEEEe
Confidence 99883322 1346888999999999998754
No 325
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.95 E-value=0.0072 Score=56.10 Aligned_cols=66 Identities=21% Similarity=0.286 Sum_probs=46.1
Q ss_pred CCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCc-----cc---c-----C---cHHHHHHHHhccCCCcEEEEec
Q 019187 178 EDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPA-----QE---L-----F---EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 178 ~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~-----~~---l-----~---t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
...+++++++|+.++++..++++||+|++|++-..... .. + + -.++++.+.++|+|||.+++..
T Consensus 18 ~~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 18 SFGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp ---CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 34578999999999988766789999999987532110 00 0 1 1346788999999999998876
Q ss_pred cc
Q 019187 242 ES 243 (345)
Q Consensus 242 ~s 243 (345)
+.
T Consensus 98 ~d 99 (297)
T 2zig_A 98 GD 99 (297)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 326
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.91 E-value=0.014 Score=55.73 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=64.8
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-----echHhHHhhCCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-----~D~~~~l~~~~~ 198 (345)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .. + .++. .|..+.+.+...
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GA------T---DFVNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC------C---EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CC------c---eEEeccccchhHHHHHHHHhC
Confidence 3457999999765 66777788876655899999999988988864 21 0 1111 123333333213
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCC-cEEEEec
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkpg-Gvlv~~~ 241 (345)
+.+|+||-.... .+.++.+.++|+++ |.++.-.
T Consensus 261 ~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 261 GGVDFSLECVGN----------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCCC----------HHHHHHHHHHhhcCCcEEEEEc
Confidence 479998843221 35688999999999 9998754
No 327
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.89 E-value=0.014 Score=55.61 Aligned_cols=97 Identities=11% Similarity=-0.005 Sum_probs=65.1
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-----echHhHHhhCCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-----~D~~~~l~~~~~ 198 (345)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .. + .++. .|..+.+.+...
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~---~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GA------T---ECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TC------S---EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CC------c---EEEecccccchHHHHHHHHhC
Confidence 3467999999765 66677788876555899999999988888864 21 0 1111 133333433223
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCC-cEEEEec
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkpg-Gvlv~~~ 241 (345)
+.+|+||-... ..+.++.+.++|+++ |.++.-.
T Consensus 260 gg~Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 260 GGVDYAVECAG----------RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SCBSEEEECSC----------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCCCEEEECCC----------CHHHHHHHHHHHhcCCCEEEEEc
Confidence 47999883322 135788999999999 9998754
No 328
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.89 E-value=0.017 Score=55.10 Aligned_cols=97 Identities=13% Similarity=0.050 Sum_probs=65.0
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-----echHhHHhhCCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-----~D~~~~l~~~~~ 198 (345)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .. + .++. .|..+.+.+...
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GA------T---ECVNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC------S---EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC------c---eEecccccchhHHHHHHHHhC
Confidence 3457999999765 66777788876655899999999988888764 21 0 1111 123333433223
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCC-cEEEEec
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkpg-Gvlv~~~ 241 (345)
+.+|+||-.... .+.++.+.++|+++ |.++.-.
T Consensus 260 ~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 260 GGVDFSFEVIGR----------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHHBCTTTCEEEECS
T ss_pred CCCcEEEECCCC----------HHHHHHHHHHhhcCCcEEEEec
Confidence 479998833221 35688899999999 9998743
No 329
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.86 E-value=0.018 Score=53.97 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=64.5
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+.+.+.. +.-+.....|..+.+.+...+.+|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGF------DGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCC------SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC------CEEEECCCHHHHHHHHHhcCCCce
Confidence 45679999997 457777777877654 899999999888888333321 100111112334444333245799
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+.... .+.++.+.++|+++|.++.-.
T Consensus 221 ~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 221 VFFDNVG-----------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEESSC-----------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCC-----------cchHHHHHHHHhhCCEEEEEe
Confidence 8885432 146888999999999998743
No 330
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.83 E-value=0.015 Score=55.41 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=64.9
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-----echHhHHhhCCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-----~D~~~~l~~~~~ 198 (345)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.. .++. .|..+.+.+...
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----------~vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT----------DCLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS----------EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc----------EEEccccccchHHHHHHHHhC
Confidence 3457999999765 66777788876666899999999988888764211 1111 123333333213
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCC-cEEEEec
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkpg-Gvlv~~~ 241 (345)
+.+|+||-.... .+.++.+.++|+++ |.+++-.
T Consensus 264 ~g~Dvvid~~G~----------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 264 GGVDYSLDCAGT----------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SCBSEEEESSCC----------HHHHHHHHHTBCTTTCEEEECC
T ss_pred CCccEEEECCCC----------HHHHHHHHHHhhcCCCEEEEEC
Confidence 479998833221 35788999999999 9998754
No 331
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.76 E-value=0.017 Score=54.97 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=64.4
Q ss_pred CCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 126 NPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
..++||++| +|-|..+..+++.....+|++++.+++-.+.+++. .... .++. ..|..+.+.+...+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Gad~-vi~~------~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GAHH-VIDH------SKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TCSE-EECT------TSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CCCE-EEeC------CCCHHHHHHHhcCCCceE
Confidence 346899998 34477888888863346899999999988988873 2100 0010 023344444443467998
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|+-... ....++.+.++|+++|.+++-
T Consensus 243 vid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 873321 235788999999999999874
No 332
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.76 E-value=0.058 Score=51.44 Aligned_cols=100 Identities=24% Similarity=0.339 Sum_probs=59.1
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.+++||++|+|. |..+..+++..+. +|+++|.+++-.+.+++.+.. .+..+..+..++.+.. ..+|+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~DvV 234 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETAV--AEADLL 234 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHHH--HTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHHH--cCCCEE
Confidence 358999999854 3334445555555 899999999888877765432 1223322222222211 358999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|.....+....+.+.+. ...+.|++||+++.-
T Consensus 235 I~~~~~~~~~~~~li~~----~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 235 IGAVLVPGRRAPILVPA----SLVEQMRTGSVIVDV 266 (361)
T ss_dssp EECCCCTTSSCCCCBCH----HHHTTSCTTCEEEET
T ss_pred EECCCcCCCCCCeecCH----HHHhhCCCCCEEEEE
Confidence 86554433223333333 455678999988763
No 333
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.76 E-value=0.016 Score=55.06 Aligned_cols=97 Identities=16% Similarity=0.099 Sum_probs=64.8
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-----echHhHHhhCCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-----~D~~~~l~~~~~ 198 (345)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.. .++. .|..+.+.+...
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~----------~vi~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT----------ECINPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS----------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc----------eEeccccccccHHHHHHHHhC
Confidence 3457999999765 66677778776555899999999988888864211 1111 123334433223
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCC-cEEEEec
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~Lkpg-Gvlv~~~ 241 (345)
+.+|+|+-.... .+.++.+.++|+++ |.++.-.
T Consensus 259 ~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 259 GGVDYSFECIGN----------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCCc----------HHHHHHHHHhhccCCcEEEEEe
Confidence 479998833221 35688899999999 9998754
No 334
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.74 E-value=0.027 Score=53.10 Aligned_cols=96 Identities=17% Similarity=0.121 Sum_probs=63.4
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE----echHhHHhh-CC-
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI----GDGVAFLKA-VP- 197 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~----~D~~~~l~~-~~- 197 (345)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-. + .++. .|..+-+.+ ..
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~---~~~~~~~~~~~~~~i~~~~~~ 235 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA-------D---VTLVVDPAKEEESSIIERIRS 235 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------S---EEEECCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC-------C---EEEcCcccccHHHHHHHHhcc
Confidence 3567999999865 6677778887654 59999999999999886421 1 1111 222222322 11
Q ss_pred --CCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 198 --EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 198 --~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.+.+|+|+-.... ...++.+.++|+++|.++.-.
T Consensus 236 ~~g~g~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 236 AIGDLPNVTIDCSGN----------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HSSSCCSEEEECSCC----------HHHHHHHHHHSCTTCEEEECS
T ss_pred ccCCCCCEEEECCCC----------HHHHHHHHHHHhcCCEEEEEe
Confidence 2469998843321 346788899999999998754
No 335
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.72 E-value=0.21 Score=46.40 Aligned_cols=147 Identities=14% Similarity=0.154 Sum_probs=90.4
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcC
Q 019187 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~ 208 (345)
+||+|-||.|++..-+.+. +..-+.++|+|+..++.-+.+++. +++.+|..+.-.+. -...|+|+..+
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~~----------~~~~~DI~~i~~~~-~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHSA----------KLIKGDISKISSDE-FPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCCS----------EEEESCGGGCCGGG-SCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCCC----------CcccCChhhCCHhh-CCcccEEEecC
Confidence 7999999999998887666 467788999999999999888752 46789977754322 35689998654
Q ss_pred CCCC----CC-------ccccCcHHHHHHHHhccCCCcEEEEeccchhh--hhhHHHHHHHHHHhhcCCcceEEEEEEee
Q 019187 209 SDPI----GP-------AQELFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVANCRQIFKGSVNYAWTTVPT 275 (345)
Q Consensus 209 ~~p~----~~-------~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~--~~~~~~~i~~~l~~~F~~~v~~~~~~vP~ 275 (345)
+... +. ...|+ .+++ .+.+.++|.-+++=|...... ....+..+++.+.+.= ..+.+.....-.
T Consensus 70 PCQ~fS~ag~~~g~~d~R~~L~-~~~~-r~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G-Y~v~~~vlna~~ 146 (331)
T 3ubt_Y 70 PSQSWSEGGSLRGIDDPRGKLF-YEYI-RILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAG-YDVHIILLNAND 146 (331)
T ss_dssp CGGGTEETTEECCTTCGGGHHH-HHHH-HHHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHT-EEEEEEEEEGGG
T ss_pred CCCCcCCCCCccCCCCchhHHH-HHHH-HHHhccCCeEEEeeeecccccccccchhhhhhhhhccCC-cEEEEEeccccc
Confidence 4311 10 01121 2333 345568998777767644332 2346677777776541 123222233333
Q ss_pred cCCC---cEEEEEEecCC
Q 019187 276 YPSG---VIGFMLCSTEG 290 (345)
Q Consensus 276 y~~g---~w~~~~ask~~ 290 (345)
|.-- .-.|++|.+..
T Consensus 147 yGvPQ~R~Rvfivg~r~~ 164 (331)
T 3ubt_Y 147 YGVAQDRKRVFYIGFRKE 164 (331)
T ss_dssp TTCSBCCEEEEEEEEEGG
T ss_pred CCCCcccceEEEEEEcCC
Confidence 4111 24788887653
No 336
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.71 E-value=0.017 Score=55.34 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=63.8
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE------echHhHHhhC-
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI------GDGVAFLKAV- 196 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~------~D~~~~l~~~- 196 (345)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. .. + .++. .|..+.+.+.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GA------D---LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TC------S---EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CC------c---EEEeccccCcchHHHHHHHHh
Confidence 3457999999654 66777788876546899999999999988863 21 1 1222 1222333332
Q ss_pred CCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 197 ~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
....+|+||-.... .+.++.+.++|+++|.++.-.
T Consensus 264 ~g~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGD----------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSC----------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEEEe
Confidence 22369998843321 145788889999999998753
No 337
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.71 E-value=0.011 Score=53.65 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=40.7
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD 172 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~ 172 (345)
.....|||..||+|.++.++.+. ..+++++|+++..++.+++++..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHh
Confidence 45678999999999999998887 46899999999999999998754
No 338
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.64 E-value=0.03 Score=52.43 Aligned_cols=100 Identities=11% Similarity=0.104 Sum_probs=65.7
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCcc
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~yD 202 (345)
...++||++|+|. |.++..+++..+...+++++.+++-.+.+++.=.. .-+.....|..+..+.. ....+|
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~-------~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM-------QTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-------EEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe-------EEEeCCCCCHHHHHHhhcccCCcc
Confidence 3567999999876 44566678877777889999999999999875211 01111112333333322 135578
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+-... ..+.++.+.++|+++|.+++..
T Consensus 232 ~v~d~~G----------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAG----------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSC----------SHHHHHHHHHHCCTTCEEEECC
T ss_pred ccccccc----------ccchhhhhhheecCCeEEEEEe
Confidence 7763322 2467888999999999998754
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.57 E-value=0.034 Score=53.06 Aligned_cols=95 Identities=15% Similarity=0.189 Sum_probs=63.1
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
....+||++|+|. |..+..+++..+. +|++++.+++-.+.+++. .. + .++...-.++++.. .+.+|+
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l-Ga------~---~vi~~~~~~~~~~~-~~g~Dv 260 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL-GA------D---EVVNSRNADEMAAH-LKSFDF 260 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH-TC------S---EEEETTCHHHHHTT-TTCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CC------c---EEeccccHHHHHHh-hcCCCE
Confidence 3467999999875 6677778887654 699999999888888863 21 1 12221112344443 357999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
||-....+ ..++.+.++|+++|.++.-.
T Consensus 261 vid~~g~~----------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 261 ILNTVAAP----------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEECCSSC----------CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCCH----------HHHHHHHHHhccCCEEEEec
Confidence 88433221 23567889999999998743
No 340
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.55 E-value=0.024 Score=52.97 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=62.4
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-echHhHHhhCCCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKAVPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~~y 201 (345)
...++||+.|+ |.|..+..+++..+ .+|++++.+++-++.+++. .. +..+.... .|..+.+.+...+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GF------DAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------cEEEecCCHHHHHHHHHHHhCCCC
Confidence 34678999996 55666666676654 4899999999888888553 21 00011101 233344443223579
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||.... .+.++.+.++|+++|.+++-.
T Consensus 216 d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVG-----------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSC-----------HHHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC-----------hHHHHHHHHHHhcCCEEEEEe
Confidence 99985543 134788889999999998754
No 341
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.50 E-value=0.033 Score=53.70 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=63.4
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCcc
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~yD 202 (345)
....+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... .++. ...|..+.+.+. ....+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~--vi~~-----~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH--VIDP-----TKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE--EECT-----TTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE--EEcC-----CCCCHHHHHHHHhCCCCCC
Confidence 3467999999865 667777888876669999999999999998752110 0000 012434444432 234699
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhcc----CCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKAL----RPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~L----kpgGvlv~~~ 241 (345)
+|+-....+ ...++.+.++| +++|.+++-.
T Consensus 285 ~vid~~g~~---------~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATGVP---------QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSSCH---------HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCCCc---------HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 988332211 12455555555 9999998754
No 342
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.42 E-value=0.035 Score=53.26 Aligned_cols=109 Identities=14% Similarity=0.100 Sum_probs=66.7
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEec-hHhHHhhC-CCCCc
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGD-GVAFLKAV-PEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D-~~~~l~~~-~~~~y 201 (345)
...++||++|+|. |.++..+++..+..+|+++|.+++-++.+++. .. + -+.....| ..+.+++. ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~-~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GF------E-IADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TC------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-CC------c-EEccCCcchHHHHHHHHhCCCCC
Confidence 3467999999766 77788888887666899999999999999774 21 0 01100112 23333322 23469
Q ss_pred cEEEEcCCCCCC-C----ccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIG-P----AQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~-~----~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||-....+.. . .........++.+.++|+++|.+++-.
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 998844332210 0 000011246888999999999998743
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.37 E-value=0.017 Score=54.45 Aligned_cols=99 Identities=21% Similarity=0.189 Sum_probs=64.2
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCccE
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~yDv 203 (345)
..++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... .++ ....|..+.+.+. ....+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~--~~~-----~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY--VIN-----PFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE--EEC-----TTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE--EEC-----CCCcCHHHHHHHHcCCCCCCE
Confidence 567999999854 666777787765548999999999888887642110 000 0012333334332 2346999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
||-.... .+.++.+.++|+++|.++.-.
T Consensus 240 vid~~g~----------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 240 FLEFSGA----------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEECSCC----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCCC----------HHHHHHHHHHHhcCCEEEEEc
Confidence 8844321 356888999999999998754
No 344
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.34 E-value=0.042 Score=52.17 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=63.4
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE---echHhHHhhC-CCC
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI---GDGVAFLKAV-PEG 199 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~---~D~~~~l~~~-~~~ 199 (345)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.-. + .++. .|..+.+.+. ...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGA-------D---HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC-------S---EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCC-------C---EEEcCCcccHHHHHHHHhCCC
Confidence 3467999999776 6677778887654 89999999998898887421 1 1222 2333333322 234
Q ss_pred CccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 200 ~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.+|+|+-... . +.++.+.++|+++|.++.-.
T Consensus 257 g~D~vid~~g-~----------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG-G----------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT-S----------SCHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEECCC-h----------HHHHHHHHHhhcCCEEEEEe
Confidence 7998884432 1 23677888999999998754
No 345
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.33 E-value=0.3 Score=45.96 Aligned_cols=153 Identities=7% Similarity=0.037 Sum_probs=87.9
Q ss_pred CCceEEEEeccchHHHHHHHhcC-CCcEE-EEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCcc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKI-DICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~-~~~~V-~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~yD 202 (345)
++-+|+++.||.|++...+.+.. +...+ .++|+|+..++..+.+++.. ++.+|..+...+ .+...+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 45689999999999999887763 13567 79999999999999988642 445666554221 1123689
Q ss_pred EEEEcCCCCCC------CccccC--cHHHHHH----HHhcc--CCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceE
Q 019187 203 AVIVDSSDPIG------PAQELF--EKPFFES----VAKAL--RPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNY 268 (345)
Q Consensus 203 vIi~D~~~p~~------~~~~l~--t~ef~~~----v~r~L--kpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~ 268 (345)
+|+..++.... .....- .-..|.. +.+.+ +|.-+++=|..... ....+..+++.+++. .-.+.+
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~-~~~~~~~i~~~l~~~-GY~v~~ 156 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFK-ESLVFKEIYNILIKN-QYYIKD 156 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGG-GSHHHHHHHHHHHHT-TCEEEE
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhc-ChHHHHHHHHHHHhC-CCEEEE
Confidence 99987654221 100000 1122333 33355 68777766664332 234566677777653 112222
Q ss_pred EEEEEeecCC---CcEEEEEEecCC
Q 019187 269 AWTTVPTYPS---GVIGFMLCSTEG 290 (345)
Q Consensus 269 ~~~~vP~y~~---g~w~~~~ask~~ 290 (345)
.....-.|.- =.-.|++|.+..
T Consensus 157 ~vl~a~~yGvPQ~R~R~fivg~r~~ 181 (327)
T 3qv2_A 157 IICSPIDIGIPNSRTRYYVMARLTP 181 (327)
T ss_dssp EEECGGGGTCSBCCCEEEEEEESSC
T ss_pred EEEeHHHcCCCccceEEEEEEEeCC
Confidence 2222222311 135788888764
No 346
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.25 E-value=0.026 Score=52.90 Aligned_cols=99 Identities=15% Similarity=0.080 Sum_probs=63.9
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-echHhHHhhCCCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKAVPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~~y 201 (345)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++.+... .-+.... .|..+.+.....+.+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~~------~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGFD------DAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCCS------EEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCc------eEEecCCHHHHHHHHHHHhCCCC
Confidence 34679999996 55777777777655 48999999998888887433310 0000000 133344443223579
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|+.... .+.++.+.++|+++|.+++-.
T Consensus 227 d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVG-----------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSC-----------HHHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCC-----------HHHHHHHHHHHhcCCEEEEEc
Confidence 99885432 146788899999999998743
No 347
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.22 E-value=0.0093 Score=56.17 Aligned_cols=98 Identities=19% Similarity=0.233 Sum_probs=63.3
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..++||++|+|. |..+..+++..+..+|++++.+++-++.+++. ... .++. + ..|..+.+.+.....+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~--v~~~-~----~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR--LVNP-L----EEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE--EECT-T----TSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh--ccCc-C----ccCHHHHHHHhcCCCCCEE
Confidence 567999999754 66677778876554899999998888877764 211 0010 0 1233333332213469998
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|-.... .+.++.+.++|+++|.++.-.
T Consensus 236 id~~g~----------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 236 LEFSGN----------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EECSCC----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EECCCC----------HHHHHHHHHHHhcCCEEEEEe
Confidence 843321 356888999999999988754
No 348
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.17 E-value=0.027 Score=53.18 Aligned_cols=97 Identities=9% Similarity=0.034 Sum_probs=61.5
Q ss_pred ceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 128 KKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 128 ~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
++||+.|+ |-|..+..+++..+..+|++++.+++-.+.+++.+.. +.-+.....|..+.+.+...+.+|+||
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~~d~vi 235 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF------DAAINYKKDNVAEQLRESCPAGVDVYF 235 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC------SEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC------ceEEecCchHHHHHHHHhcCCCCCEEE
Confidence 79999996 4466666677765544899999998888877764431 100110012333333332133799988
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.... .+.++.+.++|+++|.++.-.
T Consensus 236 ~~~G-----------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 236 DNVG-----------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp ESCC-----------HHHHHHHHHTEEEEEEEEECC
T ss_pred ECCC-----------HHHHHHHHHHhccCcEEEEEC
Confidence 5432 156788899999999998743
No 349
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.16 E-value=0.27 Score=46.42 Aligned_cols=155 Identities=11% Similarity=0.083 Sum_probs=91.3
Q ss_pred ceEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCccEEE
Q 019187 128 KKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAVI 205 (345)
Q Consensus 128 ~~VL~IG~G~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~yDvIi 205 (345)
-+|+++-||.|++...+.+.. +.+-|.++|+|+..++..+.+++. ..++.+|..++..+ .+...+|+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEEE
Confidence 489999999999999887763 125688999999999999998864 23567787665321 1123689999
Q ss_pred EcCCCCCC----C-------ccccCcHHHHHHHHhccC-CCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEE
Q 019187 206 VDSSDPIG----P-------AQELFEKPFFESVAKALR-PGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTV 273 (345)
Q Consensus 206 ~D~~~p~~----~-------~~~l~t~ef~~~v~r~Lk-pgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~v 273 (345)
..++.... . ...|+ .++++ +.+.++ |.-+++=|..... ....+..+++.+++. .-.+.+.....
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~r-~i~~~~~P~~~vlENV~gl~-~~~~~~~i~~~l~~~-GY~v~~~vl~a 150 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSF-LYLIG-ILDQLDNVDYILMENVKGFE-NSTVRNLFIDKLKEC-NFIYQEFLLCP 150 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCH-HHHHH-HGGGCTTCCEEEEEECTTGG-GSHHHHHHHHHHHHT-TEEEEEEEECT
T ss_pred ecCCCcchhhhhhccCCcCcccccH-HHHHH-HHHHhcCCCEEEEecchhhh-hhhHHHHHHHHHHhC-CCeEEEEEecH
Confidence 87654221 0 11222 23444 445565 8877776764432 234456666766653 11122211111
Q ss_pred eecCC---CcEEEEEEecCCCCCCC
Q 019187 274 PTYPS---GVIGFMLCSTEGPPVDF 295 (345)
Q Consensus 274 P~y~~---g~w~~~~ask~~~~~~~ 295 (345)
-.|.- -.-.|++|.+..-+..|
T Consensus 151 ~~~GvPQ~R~R~fiva~r~~~~~~f 175 (333)
T 4h0n_A 151 STVGVPNSRLRYYCTARRNNLTWPF 175 (333)
T ss_dssp TTTTCSCCCCEEEEEEEETTSCCCS
T ss_pred HHcCCCccceEEEEEEEeCCCCCCC
Confidence 22311 13578899877533344
No 350
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.16 E-value=0.036 Score=52.66 Aligned_cols=98 Identities=19% Similarity=0.163 Sum_probs=64.5
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
...++||++| +|.|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....|..+.+.....+.+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~-Ga------~~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL-GC------DRPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT-TC------SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHc-CC------cEEEecCChhHHHHHHHhcCCCCC
Confidence 4567999999 5668888888887654 899999999888888773 21 000000012333334332245799
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+||-... . ..++.+.++|+++|.++.-.
T Consensus 234 ~vid~~g----~-------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVG----G-------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSC----T-------HHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC----H-------HHHHHHHHHHhcCCEEEEEe
Confidence 9884432 1 46788899999999998754
No 351
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.11 E-value=0.056 Score=50.85 Aligned_cols=90 Identities=13% Similarity=0.064 Sum_probs=62.4
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++. .. + .++ .|.. .+ .+.+|+
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~v~-~~~~-~~----~~~~D~ 237 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM-GV------K---HFY-TDPK-QC----KEELDF 237 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT-TC------S---EEE-SSGG-GC----CSCEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc-CC------C---eec-CCHH-HH----hcCCCE
Confidence 4567999999876 7777788887654 899999999888888873 21 1 122 3422 22 237999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+-....+ +.++.+.++|+++|.++.-.
T Consensus 238 vid~~g~~----------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIPTH----------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCCSC----------CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCcH----------HHHHHHHHHHhcCCEEEEEC
Confidence 88433221 24678889999999998754
No 352
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.10 E-value=0.13 Score=49.44 Aligned_cols=97 Identities=21% Similarity=0.273 Sum_probs=57.9
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe---chHhHHhhCCCCCc
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG---DGVAFLKAVPEGTY 201 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~---D~~~~l~~~~~~~y 201 (345)
.+++|+++|+|. |..+..+++..+. +|+++|.++.-++.+++.+.. .+..... +..+.+ ...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l-----~~a 232 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV-----KRA 232 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH-----HHC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH-----cCC
Confidence 467999999865 3333344555554 899999999888877764432 1222221 222233 247
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|+||.....|......+.+. ...+.|++||+++.-
T Consensus 233 DvVi~~~~~p~~~t~~li~~----~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 233 DLVIGAVLVPGAKAPKLVSN----SLVAHMKPGAVLVDI 267 (377)
T ss_dssp SEEEECCCCTTSCCCCCBCH----HHHTTSCTTCEEEEG
T ss_pred CEEEECCCcCCCCCcceecH----HHHhcCCCCcEEEEE
Confidence 99997554443222344443 455678999988753
No 353
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.08 E-value=0.038 Score=51.97 Aligned_cols=95 Identities=13% Similarity=0.009 Sum_probs=62.2
Q ss_pred CCceEEEEeccc-hHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech-HhHHhhC-CCCC
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG-VAFLKAV-PEGT 200 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~-~~~l~~~-~~~~ 200 (345)
..++||++|+|. |..+..+++.. + .+|++++.+++-.+.+++. .. + .++..+- .+++... ....
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALEL-GA------D---YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHH-TC------S---EEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHh-CC------C---EEeccccchHHHHHhhcCCC
Confidence 457999999865 66677777764 5 4799999999988888873 21 1 1221111 1233222 1337
Q ss_pred ccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+||-.... .+.++.+.++|+++|.++.-.
T Consensus 239 ~D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIAIDLVGT----------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEEESSCC----------HHHHHHHHHHEEEEEEEEECC
T ss_pred ccEEEECCCC----------hHHHHHHHHHhhcCCEEEEeC
Confidence 9998843321 347888999999999998743
No 354
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.04 E-value=0.21 Score=49.65 Aligned_cols=125 Identities=17% Similarity=0.087 Sum_probs=81.2
Q ss_pred CceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC----------
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV---------- 196 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~---------- 196 (345)
.-+|++|-||.|++...+.+. +..-|.++|+|+..++.-+.++.. .|...++.+|..++....
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 458999999999999888766 456689999999999999888742 245567889988775210
Q ss_pred -----CCCCccEEEEcCCCCC-CCcc-------------------ccCcHHHHHHHHhccCCCcEEEEeccchhhh--hh
Q 019187 197 -----PEGTYDAVIVDSSDPI-GPAQ-------------------ELFEKPFFESVAKALRPGGVVSTQAESIWLH--MH 249 (345)
Q Consensus 197 -----~~~~yDvIi~D~~~p~-~~~~-------------------~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~--~~ 249 (345)
....+|+|+..++... ..+. .|| .++++ +.+.++|.-+++=|....... ..
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf-~e~~r-iI~~~rPk~fvlENV~gl~s~~~g~ 238 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLF-FDVVR-IIDARRPAMFVLENVKNLKSHDKGK 238 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHH-HHHHH-HHHHHCCSEEEEEEETTTTTGGGGH
T ss_pred hhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHH-HHHHH-HHHHcCCcEEEEeCcHHHhcccCCc
Confidence 0246899998765432 1110 111 22333 344678987777676544321 24
Q ss_pred HHHHHHHHHHh
Q 019187 250 IIEDIVANCRQ 260 (345)
Q Consensus 250 ~~~~i~~~l~~ 260 (345)
.+..+++.|++
T Consensus 239 ~f~~i~~~L~~ 249 (482)
T 3me5_A 239 TFRIIMQTLDE 249 (482)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 56667777765
No 355
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.03 E-value=0.056 Score=50.82 Aligned_cols=96 Identities=17% Similarity=0.199 Sum_probs=63.0
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~y 201 (345)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+++.-. +.-+... .|..+.+.+. ....+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga-------~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA-------DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC-------SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC-------cEEecCc-hhHHHHHHHHhCCCCc
Confidence 35679999996 557777888887654 89999999888888887421 1011111 3333434332 23479
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|+|+-.... +.++.+.++|+++|.++.-
T Consensus 229 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGG-----------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCch-----------hHHHHHHHhhcCCCEEEEE
Confidence 998854332 2467788999999999874
No 356
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.02 E-value=0.08 Score=51.57 Aligned_cols=97 Identities=18% Similarity=0.254 Sum_probs=62.9
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCccE
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYDA 203 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~yDv 203 (345)
..+|+++|+|. |......++.. ...|+++|.|++.++.+++. .+.++.+|+.+ .|+...-++.|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 35799999976 33333333332 35799999999999988752 24578899854 465543467999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
||+...++. .....-...+.+.|+..+++.+.
T Consensus 72 viv~~~~~~-------~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 72 LINAIDDPQ-------TNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp EEECCSSHH-------HHHHHHHHHHHHCTTCEEEEEES
T ss_pred EEECCCChH-------HHHHHHHHHHHhCCCCeEEEEEC
Confidence 997665421 12344555666778776666553
No 357
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.98 E-value=0.029 Score=52.67 Aligned_cols=98 Identities=21% Similarity=0.321 Sum_probs=63.4
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++. .. + .-+.....|..+.+.+.. +.+|+
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga-----~-~~~d~~~~~~~~~~~~~~-~~~d~ 233 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL-GA-----D-LVVNPLKEDAAKFMKEKV-GGVHA 233 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-TC-----S-EEECTTTSCHHHHHHHHH-SSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHC-CC-----C-EEecCCCccHHHHHHHHh-CCCCE
Confidence 3467999999864 6677777877654 899999999988888763 21 0 000000123333333221 56999
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
||-.... ...++.+.++|+++|.++.-.
T Consensus 234 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 234 AVVTAVS----------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEESSCC----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCCC----------HHHHHHHHHHhhcCCEEEEec
Confidence 8854321 356788899999999998753
No 358
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.96 E-value=0.034 Score=52.40 Aligned_cols=97 Identities=14% Similarity=0.298 Sum_probs=63.5
Q ss_pred CCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 126 NPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
..++||++| +|-|..+..+++..+. +|++++.+++-.+.+++.-... .++. + .|..+.+.+...+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~--vi~~-~-----~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADI--VLNH-K-----ESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSE--EECT-T-----SCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE--EEEC-C-----ccHHHHHHHhCCCCccE
Confidence 457999995 3446677778887654 8999999999889888742110 0010 1 13333343333467998
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+-... ....++.+.++|+++|.++...
T Consensus 221 v~d~~g----------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 221 VFCTFN----------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEESSC----------HHHHHHHHHHHEEEEEEEEESS
T ss_pred EEECCC----------chHHHHHHHHHhccCCEEEEEC
Confidence 884322 2356789999999999998643
No 359
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.91 E-value=0.031 Score=52.62 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=62.8
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEE-EechHhHHhhCCCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH-IGDGVAFLKAVPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~-~~D~~~~l~~~~~~~y 201 (345)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.+. ..|..+.+.+...+.+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSI-GG------EVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHT-TC------CEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHc-CC------ceEEecCccHhHHHHHHHHhCCCC
Confidence 34579999997 45666667777654 4899999998877888763 21 1000000 1233333433212379
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||..... .+.++.+.+.|+++|.++.-.
T Consensus 240 D~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 240 HGVINVSVS----------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEEECSSC----------HHHHHHHTTSEEEEEEEEECC
T ss_pred CEEEECCCc----------HHHHHHHHHHHhcCCEEEEEe
Confidence 999855431 357888999999999998754
No 360
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.81 E-value=0.033 Score=52.11 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=63.4
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~y 201 (345)
...++||++| +|-|..+..+++..+. +|++++.+++-.+.+++.-... -+.....|..+.+.+. ....+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~-------~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEY-------LINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcE-------EEeCCCchHHHHHHHHhCCCCc
Confidence 3567999999 3557777778887654 8999999999888887742110 0111112333334332 23569
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|+-.... +.++.+.++|+++|.++.-.
T Consensus 219 D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGK-----------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGG-----------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCh-----------HHHHHHHHHhccCCEEEEEc
Confidence 998844321 34778889999999998753
No 361
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.78 E-value=0.025 Score=53.12 Aligned_cols=98 Identities=15% Similarity=0.073 Sum_probs=61.2
Q ss_pred CCCceEEEEecc--chHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 125 PNPKKVLVIGGG--DGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~G--~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
...++||++|+| -|..+..+++..+. +|++++.+++-++.+++.-... -+.....|..+.+.+ .....+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~-------~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAY-------VIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcE-------EEeCCcccHHHHHHHHhCCCCC
Confidence 456799999986 56677777876554 8999999988888888742110 011111233333332 223479
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|+-.... .......++|+++|.++.-.
T Consensus 215 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIGG-----------PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSCH-----------HHHHHHHHTEEEEEEEEECC
T ss_pred cEEEECCCC-----------hhHHHHHHHhcCCCEEEEEe
Confidence 988844321 22334458999999998754
No 362
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.59 E-value=0.034 Score=51.88 Aligned_cols=98 Identities=11% Similarity=0.037 Sum_probs=63.4
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
...++||++| +|-|..+..+++..+. +|++++.+++-.+.+++.-... -+.....|..+.+.+ .....+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~-------~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWE-------TIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCE-------EEeCCCccHHHHHHHHhCCCCc
Confidence 3467999999 3557777778877554 8999999999888888642110 011111233333333 223579
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|+-.... +.++.+.++|+++|.++.-.
T Consensus 211 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ-----------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG-----------GGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh-----------HHHHHHHHHhcCCCEEEEEe
Confidence 988843321 34678889999999998754
No 363
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.55 E-value=0.063 Score=50.76 Aligned_cols=95 Identities=15% Similarity=0.125 Sum_probs=60.1
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
...+||++|+|. |..+..+++..+. +|++++.+++-.+.+++.+.. + . ++..+-.+.+.+. .+.+|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa------~-~--vi~~~~~~~~~~~-~~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGA------D-D--YVIGSDQAKMSEL-ADSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCC------S-C--EEETTCHHHHHHS-TTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCC------c-e--eeccccHHHHHHh-cCCCCEE
Confidence 557999999754 5566667776554 899999998888887744432 1 1 1111112344444 3579988
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+-....+ ..++.+.++|+++|.++.-.
T Consensus 249 id~~g~~----------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPVH----------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCSC----------CCSHHHHTTEEEEEEEEECS
T ss_pred EECCCCh----------HHHHHHHHHhccCCEEEEeC
Confidence 8433221 12456778999999998754
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.42 E-value=0.039 Score=52.16 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=62.5
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
...++||++| +|-|..+..+++..+. +|++++.+++-.+.+++.-... -+.....|..+.+.+...+.+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~-------~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKR-------GINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCE-------EEeCCchHHHHHHHHHhCCCce
Confidence 3567999996 3457777778887654 8999999999889888742110 0111112333333322145799
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+-.... +.++.+.++|+++|.++.-.
T Consensus 238 vvid~~g~-----------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 238 IILDMIGA-----------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEESCCG-----------GGHHHHHHTEEEEEEEEECC
T ss_pred EEEECCCH-----------HHHHHHHHHhccCCEEEEEE
Confidence 88854321 24677889999999998743
No 365
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.34 E-value=0.24 Score=47.26 Aligned_cols=100 Identities=18% Similarity=0.290 Sum_probs=54.7
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.+++|+++|+|. |..+...++..+. +|+++|.+++-.+.+++.+.. .+.....+..++-+. -...|+|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~--------~~~~~~~~~~~l~~~--~~~~DvV 233 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGG--------RVITLTATEANIKKS--VQHADLL 233 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--------SEEEEECCHHHHHHH--HHHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCc--------eEEEecCCHHHHHHH--HhCCCEE
Confidence 358999999854 3333334444444 899999999877776654321 233333232222111 1357999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|.....+......+.+ +.+.+.|++||+++.-
T Consensus 234 i~~~g~~~~~~~~li~----~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVT----RDMLSLMKEGAVIVDV 265 (369)
T ss_dssp EECCC-------CCSC----HHHHTTSCTTCEEEEC
T ss_pred EECCCCCccccchhHH----HHHHHhhcCCCEEEEE
Confidence 8765433211223333 4455678999987753
No 366
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.33 E-value=0.039 Score=51.96 Aligned_cols=99 Identities=21% Similarity=0.257 Sum_probs=61.8
Q ss_pred CCCceEEEEecc--chHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCC-CC
Q 019187 125 PNPKKVLVIGGG--DGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE-GT 200 (345)
Q Consensus 125 ~~~~~VL~IG~G--~G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~-~~ 200 (345)
...++||++|+| .|..+..+++.. + .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+... +.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRA-GA------DYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHh-CC------CEEecCCCccHHHHHHHHhcCCC
Confidence 356799999987 445556666654 4 4799999999888888763 21 00000001222222333222 57
Q ss_pred ccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+||..... ...++.+.++|+++|.++.-.
T Consensus 241 ~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 241 VDAVIDLNNS----------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEEESCCC----------HHHHTTGGGGEEEEEEEEECC
T ss_pred ceEEEECCCC----------HHHHHHHHHHHhcCCEEEEEC
Confidence 9999854432 246788889999999998743
No 367
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.29 E-value=0.11 Score=49.23 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=59.7
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..++||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+.. + .++..+-.+.+.+. .+.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa------~---~v~~~~~~~~~~~~-~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGA------D---SFLVSRDQEQMQAA-AGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCC------S---EEEETTCHHHHHHT-TTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCC------c---eEEeccCHHHHHHh-hCCCCEE
Confidence 457999999754 556666777765 4899999998877777744432 1 11111112344443 3579998
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+-....+. .++.+.++|+++|.++.-.
T Consensus 256 id~~g~~~----------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 256 IDTVSAVH----------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EECCSSCC----------CSHHHHHHEEEEEEEEECC
T ss_pred EECCCcHH----------HHHHHHHHHhcCCEEEEEc
Confidence 85433221 2356677899999988744
No 368
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.18 E-value=0.049 Score=51.57 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=60.7
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH-hHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV-AFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~-~~l~~~~~~~yD 202 (345)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++. .. + .++..+-. ++.+.. .+.+|
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~-~~~~D 245 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM-GA------D---HYIATLEEGDWGEKY-FDTFD 245 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH-TC------S---EEEEGGGTSCHHHHS-CSCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc-CC------C---EEEcCcCchHHHHHh-hcCCC
Confidence 3467999999754 6677777876554 799999998888888773 21 1 12222111 334433 25799
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+||-..... .. +.++.+.++|+++|.++.-.
T Consensus 246 ~vid~~g~~-~~-------~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 246 LIVVCASSL-TD-------IDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEECCSCS-TT-------CCTTTGGGGEEEEEEEEECC
T ss_pred EEEECCCCC-cH-------HHHHHHHHHhcCCCEEEEec
Confidence 988543320 00 12455678899999998643
No 369
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.11 E-value=0.21 Score=44.57 Aligned_cols=100 Identities=13% Similarity=0.075 Sum_probs=58.0
Q ss_pred HHHHhcccccCCCCceEEEEeccchHHHHH--HHhcCCCcEEEEEECC--HHHHHHHHhcccccccCCCCCCEEEEEech
Q 019187 114 EMITHLPLCSIPNPKKVLVIGGGDGGVLRE--VSRHSSVEKIDICEID--KMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (345)
Q Consensus 114 e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~--ll~~~~~~~V~~VEid--~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~ 189 (345)
|.+.++|+...-..++||+||+|.=+..+. +++. ..+|++|+.+ +++.+++.+ .+++++..+.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~~ 84 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEAK-----------GQLRVKRKKV 84 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHHT-----------TSCEEECSCC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHc-----------CCcEEEECCC
Confidence 556778887767789999999997554433 4444 3578888654 454444432 2456654442
Q ss_pred HhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 190 ~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
. ... -..+|+||....++ +.-..+++..+ -|++|-.+
T Consensus 85 ~---~~d-L~~adLVIaAT~d~----------~~N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 85 G---EED-LLNVFFIVVATNDQ----------AVNKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp C---GGG-SSSCSEEEECCCCT----------HHHHHHHHHSC-TTCEEEC-
T ss_pred C---HhH-hCCCCEEEECCCCH----------HHHHHHHHHHh-CCCEEEEe
Confidence 1 111 24689999765443 34455555556 78887544
No 370
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.06 E-value=0.096 Score=49.62 Aligned_cols=93 Identities=20% Similarity=0.266 Sum_probs=58.8
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH---HHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK---MVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~---~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.++||++|+|. |..+..+++..+. +|++++.++ +-.+.+++. .. + .+. . .|..+.+.+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~-ga-----~--~v~-~-~~~~~~~~~~-~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET-KT-----N--YYN-S-SNGYDKLKDS-VGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH-TC-----E--EEE-C-TTCSHHHHHH-HCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh-CC-----c--eec-h-HHHHHHHHHh-CCCCC
Confidence 67999999843 4455566666554 899999987 777887763 11 0 111 0 0222233222 25799
Q ss_pred EEEEcCCCCCCCccccCcHHHH-HHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFF-ESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~-~~v~r~LkpgGvlv~~~ 241 (345)
+||.....+ ..+ +.+.+.|+++|.++.-.
T Consensus 249 ~vid~~g~~----------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 249 VIIDATGAD----------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEECCCCC----------THHHHHHGGGEEEEEEEEECS
T ss_pred EEEECCCCh----------HHHHHHHHHHHhcCCEEEEEe
Confidence 998544321 246 88899999999988754
No 371
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.03 E-value=0.072 Score=49.99 Aligned_cols=98 Identities=17% Similarity=0.181 Sum_probs=62.6
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~y 201 (345)
...++||++|+ |.|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....|..+.+.+. ....+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~-ga------~~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL-GA------DETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH-TC------SEEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-CC------CEEEcCCcccHHHHHHHHhCCCCc
Confidence 34679999997 567777778877654 899999999988888763 21 100000011222333322 13479
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||.... + +.++.+.++|+++|.++.-.
T Consensus 237 d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 237 DKVVDHTG-A----------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEESSC-S----------SSHHHHHHHEEEEEEEEESS
T ss_pred eEEEECCC-H----------HHHHHHHHhhccCCEEEEEe
Confidence 99985543 1 23677888999999998754
No 372
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.90 E-value=0.078 Score=49.45 Aligned_cols=98 Identities=14% Similarity=0.176 Sum_probs=61.9
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+ .....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKL-GC------HHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCHHHHHHHHHHhCCCCC
Confidence 3467999999 466777777777755 4899999999888888763 21 10000001222222322 123469
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||..... +.++.+.++|+++|.++.-.
T Consensus 216 d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK-----------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT-----------TTHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 999854432 24678889999999998754
No 373
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.88 E-value=0.1 Score=48.28 Aligned_cols=88 Identities=15% Similarity=0.258 Sum_probs=57.5
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
...++||++|+|. |..+..+++..+. +|++++ +++-.+.+++. .. -.++ .| .+.. .+.+|+
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l-Ga---------~~v~-~d----~~~v-~~g~Dv 202 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR-GV---------RHLY-RE----PSQV-TQKYFA 202 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH-TE---------EEEE-SS----GGGC-CSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc-CC---------CEEE-cC----HHHh-CCCccE
Confidence 4567999999854 7777788887655 899999 88888888774 21 1122 24 2333 567998
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+ |+... +....+.++|+++|.++.-.
T Consensus 203 v~-d~~g~----------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 203 IF-DAVNS----------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EE-CC-----------------TTGGGEEEEEEEEEEC
T ss_pred EE-ECCCc----------hhHHHHHHHhcCCCEEEEEe
Confidence 87 33221 12256778999999998753
No 374
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.88 E-value=0.14 Score=42.18 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=55.5
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH--hHHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV--AFLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~yD 202 (345)
...+|+++|+|. |......++..+ .+|+++|.+++.++.+++ .....++.+|.. +.+....-..+|
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcccCC
Confidence 457999999876 332223333333 489999999876543321 112345566643 233322124689
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
+||+...++. .......+.+.+.+...++....++
T Consensus 87 ~Vi~~~~~~~-------~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 87 MVFAFTNDDS-------TNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp EEEECSSCHH-------HHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred EEEEEeCCcH-------HHHHHHHHHHHHCCCCeEEEEECCH
Confidence 9997654321 1233344455566666777655444
No 375
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.87 E-value=0.066 Score=45.15 Aligned_cols=114 Identities=20% Similarity=0.239 Sum_probs=70.8
Q ss_pred HHHhcccccCCCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHh
Q 019187 115 MITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK 194 (345)
Q Consensus 115 ~l~~l~l~~~~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~ 194 (345)
.|.|..-....-+.-||++|.|+|.+--++....+..+|.++|-.- +.+ +.. ..+.-.++.||+++-+.
T Consensus 29 ~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~------~~h-p~~----~P~~e~~ilGdi~~tL~ 97 (174)
T 3iht_A 29 CLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAV------ASH-PDS----TPPEAQLILGDIRETLP 97 (174)
T ss_dssp HHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSC------CCC-GGG----CCCGGGEEESCHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeee------ccC-CCC----CCchHheecccHHHHHH
Confidence 3444444334456789999999999999998887788999998621 111 111 22345689999998876
Q ss_pred hC-C--CCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 195 AV-P--EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 195 ~~-~--~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
.. + ..+.-++-.|.-........-+..-.=..+..+|.|||+++.
T Consensus 98 ~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 98 ATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 42 1 344555555654332111111112233456789999999985
No 376
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.86 E-value=0.14 Score=46.91 Aligned_cols=91 Identities=18% Similarity=0.100 Sum_probs=61.1
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech-HhHHhhCCCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG-VAFLKAVPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~-~~~l~~~~~~~y 201 (345)
...++||++|+ |.|..+..+++..+. +|++++.+++-.+.+++. .. + .++..+- .++.+.. +.+
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~-ga------~---~~~~~~~~~~~~~~~--~~~ 190 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL-GA------E---EAATYAEVPERAKAW--GGL 190 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT-TC------S---EEEEGGGHHHHHHHT--TSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-CC------C---EEEECCcchhHHHHh--cCc
Confidence 45679999996 456677778887654 899999998888888763 21 1 1222211 2344333 569
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
|+|+- ... +.++.+.++|+++|.++.-
T Consensus 191 d~vid-~g~-----------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 191 DLVLE-VRG-----------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEE-CSC-----------TTHHHHHTTEEEEEEEEEC
T ss_pred eEEEE-CCH-----------HHHHHHHHhhccCCEEEEE
Confidence 99985 432 2367888999999998864
No 377
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.85 E-value=0.32 Score=47.19 Aligned_cols=110 Identities=17% Similarity=0.196 Sum_probs=61.1
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccC-C---CC-CCEEEEE---ech-----Hh
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG-F---ED-PRVTLHI---GDG-----VA 191 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~-~---~~-~rv~v~~---~D~-----~~ 191 (345)
.+.+|++||+|. |..+..+++..+ .+|+++|.++...+.+++.-..+... . ++ ....... .+. ..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 467999999986 444444566555 48999999998888887631111000 0 00 0000000 000 00
Q ss_pred HHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 192 FLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 192 ~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
-+.+. -...|+||.-...|...++.+++. .+.+.+|||.+++--+
T Consensus 268 ~l~e~-l~~aDVVI~tvlipg~~ap~Lvt~----emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 268 LVAEH-IAKQDIVITTALIPGRPAPRLVTR----EMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHH-HHTCSEEEECCCCSSSCCCCCBCH----HHHTTSCTTCEEEETT
T ss_pred HHHHH-hcCCCEEEECCcCCCCCCCEEecH----HHHhcCCCCCEEEEEe
Confidence 11111 135799997655554455667775 5566789988887543
No 378
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.80 E-value=0.12 Score=48.45 Aligned_cols=95 Identities=15% Similarity=0.217 Sum_probs=61.9
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~y 201 (345)
...++||++| +|-|..+..+++..+. +|+++ .+++-++.+++. .. +. +. ...|..+.+.+. ....+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l-Ga------~~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL-GA------TP-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH-TS------EE-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc-CC------CE-ec-cCCCHHHHHHHHhcCCCc
Confidence 3567999999 3457778888887654 89999 888888888764 21 11 22 122333333322 23579
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|+-... . +.++.+.++|+++|.++.-.
T Consensus 218 D~vid~~g----~-------~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTLG----G-------PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESSC----T-------HHHHHHHHHEEEEEEEEESC
T ss_pred eEEEECCC----c-------HHHHHHHHHHhcCCeEEEEc
Confidence 98874322 1 46788889999999998743
No 379
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.78 E-value=0.1 Score=48.41 Aligned_cols=91 Identities=15% Similarity=0.209 Sum_probs=61.2
Q ss_pred eEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 129 KVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 129 ~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
+||++|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. + .++..+-...++....+.+|+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~~~d~v~- 216 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL-GA------N---RILSRDEFAESRPLEKQLWAGAI- 216 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH-TC------S---EEEEGGGSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-CC------C---EEEecCCHHHHHhhcCCCccEEE-
Confidence 5999995 557888888988765 899999999888888874 21 1 11111111113333346799876
Q ss_pred cCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 207 D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|... .+.++.+.++|+++|.++.-.
T Consensus 217 d~~g----------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 217 DTVG----------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp ESSC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred ECCC----------cHHHHHHHHHHhcCCEEEEEe
Confidence 4321 247889999999999998753
No 380
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.64 E-value=0.59 Score=37.43 Aligned_cols=69 Identities=20% Similarity=0.287 Sum_probs=44.9
Q ss_pred ceEEEEeccc-hH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCccE
Q 019187 128 KKVLVIGGGD-GG-VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYDA 203 (345)
Q Consensus 128 ~~VL~IG~G~-G~-~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~yDv 203 (345)
++|+++|+|. |. +++.+.+. ..+|+++|.|++.++.+++. .+.++.+|+.+ .++...-...|+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 5899999875 22 22333333 35799999999888776642 24677788743 455443467899
Q ss_pred EEEcCC
Q 019187 204 VIVDSS 209 (345)
Q Consensus 204 Ii~D~~ 209 (345)
|++-..
T Consensus 74 vi~~~~ 79 (141)
T 3llv_A 74 VLITGS 79 (141)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 997554
No 381
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.62 E-value=0.18 Score=46.91 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=55.6
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcE--EEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CC-CCCc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEK--IDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VP-EGTY 201 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~--V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~-~~~y 201 (345)
..-+|++|-||.|++...+.+. +..- |.++|+|+..++..+.+++ ...++.+|..++... .+ .+.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCCc
Confidence 4569999999999999888776 3443 6899999999998888764 235778888765322 10 2469
Q ss_pred cEEEEcCCC
Q 019187 202 DAVIVDSSD 210 (345)
Q Consensus 202 DvIi~D~~~ 210 (345)
|+|+..++.
T Consensus 85 Dll~ggpPC 93 (295)
T 2qrv_A 85 DLVIGGSPC 93 (295)
T ss_dssp SEEEECCCC
T ss_pred CEEEecCCC
Confidence 999987653
No 382
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.59 E-value=1.3 Score=43.43 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=63.5
Q ss_pred ceEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhccccc-ccCCC--------CCCEEEEEechHhHHhhC
Q 019187 128 KKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGFE--------DPRVTLHIGDGVAFLKAV 196 (345)
Q Consensus 128 ~~VL~IG~G~G~~--~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~-~~~~~--------~~rv~v~~~D~~~~l~~~ 196 (345)
.+|.+||+|.=+. +..+++. .-+|+++|++++.++..++..... ..++. ..++++ ..|..+.++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~~-- 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAVP-- 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHGG--
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHHh--
Confidence 4799999987443 3334554 348999999999888776632111 00000 223443 345444443
Q ss_pred CCCCccEEEEcCCCCCCC---ccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 197 PEGTYDAVIVDSSDPIGP---AQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 197 ~~~~yDvIi~D~~~p~~~---~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
..|+||+..+.|... +.--+..+.++.+...|++|-+++..++.
T Consensus 78 ---~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv 124 (450)
T 3gg2_A 78 ---EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV 124 (450)
T ss_dssp ---GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred ---cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence 359999877655321 11112356778888889988777765543
No 383
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.58 E-value=0.23 Score=47.91 Aligned_cols=108 Identities=19% Similarity=0.214 Sum_probs=58.9
Q ss_pred CCceEEEEeccch-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCC-C-CCEEEEE-e-------chHhHHh
Q 019187 126 NPKKVLVIGGGDG-GVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-D-PRVTLHI-G-------DGVAFLK 194 (345)
Q Consensus 126 ~~~~VL~IG~G~G-~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~-~-~rv~v~~-~-------D~~~~l~ 194 (345)
.+.+|++||+|.- ..+..+++..+ .+|+++|.++...+.+++.-..+ ..++ + ....-.. . ....-+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~lGa~~-~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSVGAQW-LDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHTTCEE-CCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCeE-EeccccccccccchhhhhHHHHhhhHHHHH
Confidence 4689999999863 34444555544 48999999998888777631110 0000 0 0000000 0 0011122
Q ss_pred hCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 195 AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 195 ~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
+. -...|+||.-...|....+.+++. .+.+.+|||++++--
T Consensus 261 e~-l~~aDIVI~tv~iPg~~ap~Lvt~----emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 261 DA-ITKFDIVITTALVPGRPAPRLVTA----AAATGMQPGSVVVDL 301 (381)
T ss_dssp HH-HTTCSEEEECCCCTTSCCCCCBCH----HHHHTSCTTCEEEET
T ss_pred HH-HhcCCEEEECCCCCCcccceeecH----HHHhcCCCCcEEEEE
Confidence 11 256899997654454445566665 455578898877753
No 384
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.51 E-value=0.44 Score=38.91 Aligned_cols=101 Identities=12% Similarity=0.066 Sum_probs=59.6
Q ss_pred CceEEEEeccchHHHHHHHhc--CCCcEEEEEECC-HHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCc
Q 019187 127 PKKVLVIGGGDGGVLREVSRH--SSVEKIDICEID-KMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTY 201 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid-~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~y 201 (345)
.++|+++|+|. +++.+++. ....+|+++|.+ ++..+..++.++ ..+.++.+|+.+ .+....-+..
T Consensus 3 ~~~vlI~G~G~--vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHSI--LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--------DNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--------TTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCCH--HHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc--------CCCeEEEcCCCCHHHHHHcChhhC
Confidence 36899998754 44443332 013579999998 454444443322 247788898753 3443223678
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
|+|++...+.. .........+.+.|...++....++
T Consensus 73 d~vi~~~~~d~-------~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 73 RAILALSDNDA-------DNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp SEEEECSSCHH-------HHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred CEEEEecCChH-------HHHHHHHHHHHHCCCCEEEEEECCH
Confidence 99997654321 1234455566777777777765443
No 385
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.51 E-value=0.98 Score=44.64 Aligned_cols=122 Identities=14% Similarity=0.126 Sum_probs=70.1
Q ss_pred CCceEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhcc-cccccCCC--------CCCEEEEEechHhHHh
Q 019187 126 NPKKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFF-PDVAVGFE--------DPRVTLHIGDGVAFLK 194 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~--~~~ll~~~~~~~V~~VEid~~vi~~ar~~~-~~~~~~~~--------~~rv~v~~~D~~~~l~ 194 (345)
...+|.+||+|.-+. +..+++. .-+|+++|+|++.++..++.- +....++. ..++++ ..|..+.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 456999999996443 3445554 247999999999888877642 11000000 123332 334333343
Q ss_pred hCCCCCccEEEEcCCCCC---CCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHH
Q 019187 195 AVPEGTYDAVIVDSSDPI---GPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIV 255 (345)
Q Consensus 195 ~~~~~~yDvIi~D~~~p~---~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~ 255 (345)
. .|+||+..+.|. +.+.--+..+.++.+...|++|-+++..++.+....+.+..++
T Consensus 84 ~-----aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l 142 (478)
T 2y0c_A 84 H-----GDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAV 142 (478)
T ss_dssp H-----CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHH
T ss_pred c-----CCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHH
Confidence 3 599998776653 2222223467788888899998877665443333333343333
No 386
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.47 E-value=0.078 Score=49.28 Aligned_cols=98 Identities=13% Similarity=0.035 Sum_probs=61.0
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+ .....+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA-GA------WQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCccHHHHHHHHhCCCCc
Confidence 3467999999 455666666666544 4899999999888888763 21 00000001222222322 223469
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||.... . +.++.+.++|+++|.++.-.
T Consensus 211 D~vi~~~g----~-------~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG----R-------DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC----G-------GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc----h-------HHHHHHHHHhcCCCEEEEEe
Confidence 99985543 1 34788889999999998754
No 387
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.46 E-value=0.1 Score=49.24 Aligned_cols=98 Identities=19% Similarity=0.055 Sum_probs=61.2
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
...++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+ .....+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQNGA-------HEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------SEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHcCC-------CEEEeCCCchHHHHHHHHcCCCCc
Confidence 34679999996 55666777777655 489999999988888776311 00001001122222322 123479
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||.... .+.++.+.++|+++|.++.-.
T Consensus 241 D~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-----------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-----------hHHHHHHHHhccCCCEEEEEe
Confidence 99985432 134677889999999998754
No 388
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.39 E-value=0.18 Score=47.89 Aligned_cols=97 Identities=15% Similarity=0.082 Sum_probs=61.7
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
...++||++|+ |-|..+..+++..+. +|+++- +++-.+.++++-. +.-+.....|..+.+++...+.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGA-------EEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTC-------SEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCC-------cEEEECCCchHHHHHHHHccCCcc
Confidence 45679999998 357788888888655 777774 7777888877421 101111113444444443245699
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhcc-CCCcEEEEe
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKAL-RPGGVVSTQ 240 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~L-kpgGvlv~~ 240 (345)
+|+-... ....++.+.++| +++|.++.-
T Consensus 234 ~v~d~~g----------~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCIT----------NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSC----------SHHHHHHHHHHSCTTCEEEEES
T ss_pred EEEECCC----------chHHHHHHHHHhhcCCCEEEEE
Confidence 9883322 135678888889 699999864
No 389
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.33 E-value=0.61 Score=43.42 Aligned_cols=92 Identities=17% Similarity=0.084 Sum_probs=58.4
Q ss_pred CceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh-HHhhCCCCCccE
Q 019187 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVPEGTYDA 203 (345)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~~yDv 203 (345)
..+|.+||+|.=+ +++.+.+.....+|+++|.+++.++.+++. .. .+ -...|..+ .+ ...|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~-----~~----~~~~~~~~~~~-----~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GI-----ID----EGTTSIAKVED-----FSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TS-----CS----EEESCTTGGGG-----GCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CC-----cc----hhcCCHHHHhh-----ccCCE
Confidence 3689999998633 444455553223899999999888877653 11 11 12234333 33 34699
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
||+..+.. ...+.++.+...|+++.+++-.
T Consensus 98 Vilavp~~-------~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 98 VMLSSPVR-------TFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp EEECSCGG-------GHHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEeCCHH-------HHHHHHHHHhhccCCCcEEEEC
Confidence 99765432 1357888899999998777643
No 390
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.28 E-value=0.1 Score=49.24 Aligned_cols=98 Identities=10% Similarity=0.076 Sum_probs=60.6
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
...++||++|+ |-|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.....|..+.+.+ .....+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKL-GA------AAGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------cEEEecCChHHHHHHHHHhcCCCc
Confidence 34678999983 55666667777654 4899999999888888653 21 00000001222233322 223469
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||..... +.++.+.++|+++|.++.-.
T Consensus 233 d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIGG-----------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSCG-----------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCc-----------hHHHHHHHhccCCCEEEEEe
Confidence 999855432 23667788999999998754
No 391
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.03 E-value=1.1 Score=44.12 Aligned_cols=122 Identities=12% Similarity=0.153 Sum_probs=68.1
Q ss_pred ceEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhccccc-ccCCC-------CCCEEEEEechHhHHhhCC
Q 019187 128 KKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGFE-------DPRVTLHIGDGVAFLKAVP 197 (345)
Q Consensus 128 ~~VL~IG~G~G~~--~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~-~~~~~-------~~rv~v~~~D~~~~l~~~~ 197 (345)
.+|.+||+|.-+. +..+++.....+|+++|++++.++..++.-... ..++. ..++++ ..|..+.+.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~~-- 86 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIAE-- 86 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhhc--
Confidence 4899999997443 444555532358999999999888776521100 00000 012322 2343333332
Q ss_pred CCCccEEEEcCCCCCCC-------cccc-CcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHH
Q 019187 198 EGTYDAVIVDSSDPIGP-------AQEL-FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIV 255 (345)
Q Consensus 198 ~~~yDvIi~D~~~p~~~-------~~~l-~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~ 255 (345)
.|+||+..+.|... ...+ +..+..+.+.+.|++|.+++..++.+....+.+...+
T Consensus 87 ---aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l 149 (481)
T 2o3j_A 87 ---ADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCIL 149 (481)
T ss_dssp ---CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHH
T ss_pred ---CCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHH
Confidence 59999887665421 1111 2356778888899998777764444333333333333
No 392
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.88 E-value=0.54 Score=45.44 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=31.1
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHh
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQ 168 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~ 168 (345)
.+++|+++|+|. |..+..+++..+. +|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence 368999999886 3344455666554 89999999988777755
No 393
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.78 E-value=0.02 Score=67.60 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=49.0
Q ss_pred CceEEEEeccchHHHHHHHhcCC-----CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCc
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSS-----VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~-----~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~y 201 (345)
..+||+||.|+|+.+..+++.-. ..+++..|+++...+.+++.|... .++.-.-|..+. .......|
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-------di~~~~~d~~~~-~~~~~~~y 1312 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-------HVTQGQWDPANP-APGSLGKA 1312 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-------TEEEECCCSSCC-CC-----C
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-------cccccccccccc-ccCCCCce
Confidence 35999999999987666554321 347999999998888887776532 111100011000 00013569
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+||....-+.. .. ..+.++++++.|+|||.+++..
T Consensus 1313 dlvia~~vl~~t--~~--~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1313 DLLVCNCALATL--GD--PAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CEEEEECC------------------------CCEEEEEE
T ss_pred eEEEEccccccc--cc--HHHHHHHHHHhcCCCcEEEEEe
Confidence 999964322111 11 1357889999999999988753
No 394
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.76 E-value=4.8 Score=43.41 Aligned_cols=152 Identities=12% Similarity=0.133 Sum_probs=92.1
Q ss_pred CceEEEEeccchHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh----------
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSV-EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA---------- 195 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~-~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~---------- 195 (345)
.-++++|-||.|++..-+.+. +. .-+.++|+|+..++.-+.+++ ...++.+|..+++..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNNP---------GSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC---------CCccccccHHHHhhhccchhhhhhh
Confidence 448999999999999888766 34 567899999999999888875 345777887655311
Q ss_pred ---CC-CCCccEEEEcCCCCC-CCcccc-----------CcHHHHHHHHhccCCCcEEEEeccchhh--hhhHHHHHHHH
Q 019187 196 ---VP-EGTYDAVIVDSSDPI-GPAQEL-----------FEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVAN 257 (345)
Q Consensus 196 ---~~-~~~yDvIi~D~~~p~-~~~~~l-----------~t~ef~~~v~r~LkpgGvlv~~~~s~~~--~~~~~~~i~~~ 257 (345)
.+ .+..|+|+..++... ..+... .-.+|++ +.+.++|.-+++=|...... ....+..+++.
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~r-iv~~~rPk~~llENV~glls~~~~~~~~~i~~~ 688 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLS-YCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRC 688 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHH-HHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHH
T ss_pred hhhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHH-HHHHhCCCEEEEeccHHHhccCcchHHHHHHHH
Confidence 11 246899997665321 111110 0123333 45568998888777644332 23456667777
Q ss_pred HHhhcCCcceEEEEEEeecCCC---cEEEEEEecCC
Q 019187 258 CRQIFKGSVNYAWTTVPTYPSG---VIGFMLCSTEG 290 (345)
Q Consensus 258 l~~~F~~~v~~~~~~vP~y~~g---~w~~~~ask~~ 290 (345)
|... .-.+.+.......|..- .-.|++|++..
T Consensus 689 L~~l-GY~v~~~vLnA~dyGvPQ~R~R~fiva~r~g 723 (1002)
T 3swr_A 689 LVRM-GYQCTFGVLQAGQYGVAQTRRRAIILAAAPG 723 (1002)
T ss_dssp HHHH-TCEEEEEEEEGGGGTCSBCCEEEEEEEECTT
T ss_pred HHhc-CCeEEEEEEEHHHCCCCccceEEEEEEEeCC
Confidence 6654 12233333333344211 24788888654
No 395
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.55 E-value=0.42 Score=40.20 Aligned_cols=99 Identities=16% Similarity=0.103 Sum_probs=56.3
Q ss_pred CceEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH--hHHhhC-CCCCcc
Q 019187 127 PKKVLVIGGGDGG-VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV--AFLKAV-PEGTYD 202 (345)
Q Consensus 127 ~~~VL~IG~G~G~-~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~-~~~~yD 202 (345)
..+|+++|+|.-+ .....++.....+|+++|.|++.++.+++. .+.++.+|+. +.+... .-..+|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCCCC
Confidence 4589999987532 222222222024799999999887776542 2345666653 234432 235699
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+||+-..+.. .....-...+.+.|++.++....+
T Consensus 108 ~vi~~~~~~~-------~~~~~~~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 108 LVLLAMPHHQ-------GNQTALEQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp EEEECCSSHH-------HHHHHHHHHHHTTCCSEEEEEESS
T ss_pred EEEEeCCChH-------HHHHHHHHHHHHCCCCEEEEEECC
Confidence 9997554311 112222345567777777775533
No 396
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.46 E-value=0.13 Score=47.70 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=56.3
Q ss_pred eEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 129 KVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 129 ~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
+||++|+ |-|..+..+++..+. +|++++.+++-.+.+++. .. +.-+.....| .+.++....+.+|+|+-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~-~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVL-GA------KEVLAREDVM-AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHT-TC------SEEEECC----------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc-CC------cEEEecCCcH-HHHHHHhcCCcccEEEE
Confidence 7999996 557777888887654 799999998878888763 21 1001100111 12223222357998874
Q ss_pred cCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 207 D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.... +.++.+.++|+++|.++.-.
T Consensus 223 ~~g~-----------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 223 PVGG-----------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CSTT-----------TTHHHHHHTEEEEEEEEECS
T ss_pred CCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 3321 13677888999999998743
No 397
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.26 E-value=0.51 Score=45.18 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=31.0
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHh
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQ 168 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~ 168 (345)
.+++|+++|+|. |..+..+++..+. +|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 468999999876 3344455666554 69999999887777766
No 398
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.23 E-value=0.77 Score=39.80 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=58.6
Q ss_pred eEEEEeccchHHHHHHHh---cCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCccE
Q 019187 129 KVLVIGGGDGGVLREVSR---HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYDA 203 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~---~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~yDv 203 (345)
+|+++|+|. ++..+++ .. ..+|+++|.|++.++...+.. .+.++.+|+.+ .++...-...|+
T Consensus 2 ~iiIiG~G~--~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~----------~~~~i~gd~~~~~~l~~a~i~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGGET--TAYYLARSMLSR-KYGVVIINKDRELCEEFAKKL----------KATIIHGDGSHKEILRDAEVSKNDV 68 (218)
T ss_dssp CEEEECCHH--HHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHS----------SSEEEESCTTSHHHHHHHTCCTTCE
T ss_pred EEEEECCCH--HHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHc----------CCeEEEcCCCCHHHHHhcCcccCCE
Confidence 689999865 3333332 22 357999999999877654432 35678888754 344322467899
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
|++-..+.. .........+.+.+...++....++
T Consensus 69 vi~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~~~~ 102 (218)
T 3l4b_C 69 VVILTPRDE-------VNLFIAQLVMKDFGVKRVVSLVNDP 102 (218)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHTSCCCEEEECCCSG
T ss_pred EEEecCCcH-------HHHHHHHHHHHHcCCCeEEEEEeCc
Confidence 997654421 1234555566666777777655443
No 399
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.02 E-value=0.38 Score=45.18 Aligned_cols=107 Identities=10% Similarity=0.136 Sum_probs=64.7
Q ss_pred CCCceEEEEeccchHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhccccc----c-cC-CCC--------CCEEEEEec
Q 019187 125 PNPKKVLVIGGGDGGVLRE--VSRHSSVEKIDICEIDKMVVDVSKQFFPDV----A-VG-FED--------PRVTLHIGD 188 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~--ll~~~~~~~V~~VEid~~vi~~ar~~~~~~----~-~~-~~~--------~rv~v~~~D 188 (345)
+...+|.+||+|.-+.+.. ++.. .-+|+.+|++++.++.+.++.... . .+ +.. .+++. ..|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 4567999999998554433 4444 457999999999888776554321 0 11 111 12322 234
Q ss_pred hHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 189 GVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 189 ~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
..+.+ ..-|+||=..+.. --..++.|+++-+.++|+-+|..|+.+.
T Consensus 81 l~~a~-----~~ad~ViEav~E~-----l~iK~~lf~~l~~~~~~~aIlaSNTSsl 126 (319)
T 3ado_A 81 LAEAV-----EGVVHIQECVPEN-----LDLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp HHHHT-----TTEEEEEECCCSC-----HHHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred hHhHh-----ccCcEEeeccccH-----HHHHHHHHHHHHHHhhhcceeehhhhhc
Confidence 33332 3358887433321 1124689999999999999999987553
No 400
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.73 E-value=1.2 Score=43.78 Aligned_cols=139 Identities=16% Similarity=0.182 Sum_probs=78.2
Q ss_pred CCceEEEEeccchHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhccccc-ccCCC--------CCCEEEEEechHhHHh
Q 019187 126 NPKKVLVIGGGDGGVL--REVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGFE--------DPRVTLHIGDGVAFLK 194 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~--~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~-~~~~~--------~~rv~v~~~D~~~~l~ 194 (345)
..-|+-+||+|.=+++ ..+++. .-+|+++|+|++.++..++.-... ..++. ..++++ ..|..+.++
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~~ 83 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGVK 83 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHHh
Confidence 4468999999975543 335554 358999999999888776531100 00000 123433 345444443
Q ss_pred hCCCCCccEEEEcCCCCC----CCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEE
Q 019187 195 AVPEGTYDAVIVDSSDPI----GPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAW 270 (345)
Q Consensus 195 ~~~~~~yDvIi~D~~~p~----~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~ 270 (345)
.-|+||+..+.|. +.+.--+-.+.++.+.+.|++|-+++..++.+-. ..+.+.+.+.+.... ..+..
T Consensus 84 -----~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg---tt~~l~~~l~e~~~~-~d~~v 154 (446)
T 4a7p_A 84 -----DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVG---TGDEVERIIAEVAPN-SGAKV 154 (446)
T ss_dssp -----TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTT---HHHHHHHHHHHHSTT-SCCEE
T ss_pred -----cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCch---HHHHHHHHHHHhCCC-CCceE
Confidence 3599998766653 2111112356678888899998888776543322 233344444444322 33444
Q ss_pred EEEeec
Q 019187 271 TTVPTY 276 (345)
Q Consensus 271 ~~vP~y 276 (345)
..-|.+
T Consensus 155 ~~~Pe~ 160 (446)
T 4a7p_A 155 VSNPEF 160 (446)
T ss_dssp EECCCC
T ss_pred EeCccc
Confidence 566766
No 401
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=91.65 E-value=0.19 Score=47.13 Aligned_cols=96 Identities=15% Similarity=0.023 Sum_probs=55.0
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
...++||++|+ |.|..+..+++..+..+|.+++ +++-.+.++ +.. +.-+. ...|..+.+.+...+.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga------~~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV------THLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS------SEEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC------cEEEc-CCccHHHHHHHhcCCCce
Confidence 35679999997 3466777788875556888887 444445555 321 10111 112333444433356799
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+-.... +.++.+.++|+++|.+++-.
T Consensus 211 vv~d~~g~-----------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLCG-----------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC------------------CTTEEEEEEEEEEC
T ss_pred EEEECCCc-----------hhHHHHHHHhhcCCEEEEEC
Confidence 88843321 12367788999999998754
No 402
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.47 E-value=1.3 Score=34.74 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=52.1
Q ss_pred ceEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH--hHHhhCCCCCccE
Q 019187 128 KKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV--AFLKAVPEGTYDA 203 (345)
Q Consensus 128 ~~VL~IG~G~G~~--~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~yDv 203 (345)
.+|+++|+|.-+. +..+.+. ..+|+++|.+++.++..++.+ .+.++.+|.. +.+....-...|+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 5899998865322 2223333 357999999998776655422 2345556643 2233221356899
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
|++-..+.. .......+.+.+.++-+++.
T Consensus 73 vi~~~~~~~-------~~~~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 73 YIAVTGKEE-------VNLMSSLLAKSYGINKTIAR 101 (140)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHTTCCCEEEE
T ss_pred EEEeeCCch-------HHHHHHHHHHHcCCCEEEEE
Confidence 997654320 12334445566777655543
No 403
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.40 E-value=0.29 Score=44.07 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=23.1
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK 160 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~ 160 (345)
.++||+||+|. |......+...++.+++.+|.|.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 46999999874 33333323233678999999996
No 404
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.33 E-value=1 Score=44.27 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=62.5
Q ss_pred CceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccc----------ccc-CCCCCCEEEEEechHhHH
Q 019187 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD----------VAV-GFEDPRVTLHIGDGVAFL 193 (345)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~----------~~~-~~~~~rv~v~~~D~~~~l 193 (345)
.++|.+||+|.-+ ++..+++. ..+|+++|++++.++.+++.... ... .......++ ..|. +-+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 3589999999733 34445554 34899999999988877653211 000 011122333 4453 222
Q ss_pred hhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 194 KAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 194 ~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
...|+||.-.+... -...++++.+...++|+.+++.++.+
T Consensus 113 -----~~aDlVIeaVpe~~-----~~k~~v~~~l~~~~~~~~ii~snTs~ 152 (463)
T 1zcj_A 113 -----STVDLVVEAVFEDM-----NLKKKVFAELSALCKPGAFLCTNTSA 152 (463)
T ss_dssp -----TTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred -----CCCCEEEEcCCCCH-----HHHHHHHHHHHhhCCCCeEEEeCCCC
Confidence 34699997765310 01357888899999999888875543
No 405
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.19 E-value=0.5 Score=44.76 Aligned_cols=97 Identities=15% Similarity=0.205 Sum_probs=58.6
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
...++||++| +|-|..+..+++..+ .+|++++ +++-.+.+++. .. +.-+.....|..+-+.+ ...+|
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~l-Ga------~~v~~~~~~~~~~~~~~--~~g~D 250 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKL-GA------DDVIDYKSGSVEEQLKS--LKPFD 250 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHT-TC------SEEEETTSSCHHHHHHT--SCCBS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHc-CC------CEEEECCchHHHHHHhh--cCCCC
Confidence 3467999999 455777788888765 4788888 66666777653 21 10000001233333433 25699
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+|+-....+ ...++...++|+++|.++.-.
T Consensus 251 ~vid~~g~~---------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 251 FILDNVGGS---------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEEESSCTT---------HHHHGGGGBCSSSCCEEEESC
T ss_pred EEEECCCCh---------hhhhHHHHHhhcCCcEEEEeC
Confidence 988443221 123567778999999998754
No 406
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.13 E-value=0.44 Score=46.49 Aligned_cols=105 Identities=13% Similarity=0.144 Sum_probs=62.5
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE----ech------HhH
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI----GDG------VAF 192 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~----~D~------~~~ 192 (345)
...++||++|+ |-|..+..+++..+ .++++++.+++-++.+++.-....-...+..+.+.. .|. .+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 34678999996 45777788888765 478888889998899877421100000111110000 111 122
Q ss_pred Hhh-CCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 193 LKA-VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 193 l~~-~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+.+ .....+|+|+-. .. .+.++.+.++|+++|.+++-.
T Consensus 306 i~~~t~g~g~Dvvid~-~G----------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 306 IRELTGGEDIDIVFEH-PG----------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHTSCCEEEEEEC-SC----------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHhCCCCCcEEEEc-CC----------chhHHHHHHHhhCCcEEEEEe
Confidence 222 123579988732 21 256888899999999998743
No 407
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.03 E-value=2.7 Score=37.15 Aligned_cols=110 Identities=8% Similarity=0.114 Sum_probs=62.1
Q ss_pred CCceEEEEeccch-HH----HHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh------HHh
Q 019187 126 NPKKVLVIGGGDG-GV----LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA------FLK 194 (345)
Q Consensus 126 ~~~~VL~IG~G~G-~~----~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~------~l~ 194 (345)
+.++||+.|++++ ++ ++.+++. ..+|++++.++...+.+++..... ...++.++..|..+ +++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHHH
Confidence 4578999997632 23 4445555 357999988876555555443322 23478888888643 222
Q ss_pred hC--CCCCccEEEEcCCCCC-----CCccccCc--------------HHHHHHHHhccCCCcEEEEec
Q 019187 195 AV--PEGTYDAVIVDSSDPI-----GPAQELFE--------------KPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 195 ~~--~~~~yDvIi~D~~~p~-----~~~~~l~t--------------~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.. .-++.|++|..+.-.. .+....-. ....+.+...|+++|.++.-+
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 11 0257899998764321 11111111 124456667778888777644
No 408
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.92 E-value=0.39 Score=46.68 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=61.3
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech-------------
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG------------- 189 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~------------- 189 (345)
...++||++|+ |-|..+..+++..+ .++++++.+++-.+.+++. .. +.-+.....|.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRAL-GC------DLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------CCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CC------CEEEecccccccccccccccccch
Confidence 35679999995 44677777888765 4788888999988888764 21 10111000110
Q ss_pred -----HhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 190 -----VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 190 -----~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.+.+.+.....+|+|+-... .+.++.+.++|+++|.++.-.
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G-----------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTG-----------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSC-----------HHHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHhCCCceEEEECCC-----------chHHHHHHHHHhcCCEEEEEe
Confidence 12222211356998884322 145788889999999998754
No 409
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.83 E-value=2.2 Score=32.28 Aligned_cols=67 Identities=21% Similarity=0.240 Sum_probs=41.0
Q ss_pred CceEEEEeccchHHHHHH----HhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCC
Q 019187 127 PKKVLVIGGGDGGVLREV----SRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGT 200 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l----l~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~ 200 (345)
.++|+++|+| .+++.+ ++. +..+|++++.++.-.+..+. ..+.++..|..+ .+.+. -..
T Consensus 5 ~~~v~I~G~G--~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~-~~~ 69 (118)
T 3ic5_A 5 RWNICVVGAG--KIGQMIAALLKTS-SNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKA-LGG 69 (118)
T ss_dssp CEEEEEECCS--HHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHH-TTT
T ss_pred cCeEEEECCC--HHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHH-HcC
Confidence 3689999984 444443 333 33689999999887666541 134556666532 22222 246
Q ss_pred ccEEEEcC
Q 019187 201 YDAVIVDS 208 (345)
Q Consensus 201 yDvIi~D~ 208 (345)
+|+||...
T Consensus 70 ~d~vi~~~ 77 (118)
T 3ic5_A 70 FDAVISAA 77 (118)
T ss_dssp CSEEEECS
T ss_pred CCEEEECC
Confidence 89999655
No 410
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.79 E-value=1.5 Score=38.31 Aligned_cols=96 Identities=19% Similarity=0.108 Sum_probs=59.2
Q ss_pred CceEEEEeccchHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechH--hHHhhCCCCCcc
Q 019187 127 PKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV--AFLKAVPEGTYD 202 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~~yD 202 (345)
.++|+++|+| .+++.+++.- ... |+++|.|++.++.++ . .+.++.+|+. +.+....-...|
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~----------~~~~i~gd~~~~~~l~~a~i~~ad 73 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR--S----------GANFVHGDPTRVSDLEKANVRGAR 73 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--T----------TCEEEESCTTCHHHHHHTTCTTCS
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--c----------CCeEEEcCCCCHHHHHhcCcchhc
Confidence 4689999985 4555554431 124 999999998776654 1 3678888875 345443246789
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
+|++-..+.. .........+.+.|+..++....++
T Consensus 74 ~vi~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 74 AVIVDLESDS-------ETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp EEEECCSCHH-------HHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred EEEEcCCCcH-------HHHHHHHHHHHHCCCCeEEEEECCH
Confidence 9997554320 1123445566678876777766443
No 411
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.57 E-value=0.35 Score=45.26 Aligned_cols=62 Identities=19% Similarity=-0.008 Sum_probs=48.6
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHH
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL 193 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l 193 (345)
.....|||--||+|.++.++.+. ..+.+++|+++..++++++.+... ......+++|+.+..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDN-----NISEEKITDIYNRIL 312 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCS-----CSCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhc-----ccchHHHHHHHHHHH
Confidence 34568999999999999998887 468999999999999999998753 123455566665554
No 412
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.54 E-value=0.32 Score=45.06 Aligned_cols=91 Identities=20% Similarity=0.248 Sum_probs=57.5
Q ss_pred eEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe-ch-HhHHhhCCCCCccEE
Q 019187 129 KVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG-DG-VAFLKAVPEGTYDAV 204 (345)
Q Consensus 129 ~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~-D~-~~~l~~~~~~~yDvI 204 (345)
+||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. .. + .++.. |. .+.++....+.+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GA------S---EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TC------S---EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEEECCCchHHHHHHhhcCCccEE
Confidence 8999995 55667777787755 4699999988777888763 21 1 11211 10 111222223469988
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+-... . +.++.+.++|+++|.++.-.
T Consensus 222 id~~g----~-------~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 222 VDPVG----G-------KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EESCC----T-------HHHHHHHTTEEEEEEEEECC
T ss_pred EECCc----H-------HHHHHHHHhhcCCCEEEEEe
Confidence 73322 1 35788899999999998743
No 413
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.44 E-value=4 Score=39.90 Aligned_cols=109 Identities=13% Similarity=0.207 Sum_probs=60.5
Q ss_pred ceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcc-cccccCC-------CCCCEEEEEechHhHHhhCC
Q 019187 128 KKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFF-PDVAVGF-------EDPRVTLHIGDGVAFLKAVP 197 (345)
Q Consensus 128 ~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~-~~~~~~~-------~~~rv~v~~~D~~~~l~~~~ 197 (345)
.+|.+||+|.-+ ++..+++.....+|+++|++++.++..++.- +....++ ...++++ ..|..+.+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~~-- 82 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIKE-- 82 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHH--
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHhc--
Confidence 489999999744 3444555532357999999998877764421 1000000 0012332 2343333433
Q ss_pred CCCccEEEEcCCCCCCCc-------ccc-CcHHHHHHHHhccCCCcEEEEecc
Q 019187 198 EGTYDAVIVDSSDPIGPA-------QEL-FEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 198 ~~~yDvIi~D~~~p~~~~-------~~l-~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
.|+||+..+.|.... ..+ +..+..+.+...|++|.+++.-+.
T Consensus 83 ---aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ST 132 (467)
T 2q3e_A 83 ---ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKST 132 (467)
T ss_dssp ---CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSC
T ss_pred ---CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCc
Confidence 599998776554221 111 124566778888888776665433
No 414
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=90.24 E-value=0.43 Score=46.20 Aligned_cols=48 Identities=15% Similarity=0.237 Sum_probs=39.8
Q ss_pred CCCceEEEEeccchHHHHHHH-hcC-CCcEEEEEECCHHHHHHHHhcccc
Q 019187 125 PNPKKVLVIGGGDGGVLREVS-RHS-SVEKIDICEIDKMVVDVSKQFFPD 172 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll-~~~-~~~~V~~VEid~~vi~~ar~~~~~ 172 (345)
++...|+|||++.|..+..++ +.. +..+|.++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 355789999999999999887 443 347999999999999999887654
No 415
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.12 E-value=0.28 Score=45.54 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=24.3
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK 160 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~ 160 (345)
..+||+||+|. |......+...++.+++.+|-|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 46999999985 44333333334689999999886
No 416
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=90.07 E-value=2.8 Score=38.74 Aligned_cols=72 Identities=17% Similarity=0.274 Sum_probs=42.3
Q ss_pred CCceEEEEeccchH--HHHHHH-hcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGDGG--VLREVS-RHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~--~~~~ll-~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
++.+|.+||+|.-+ .+..+. +.++..-+.++|.+++..+.+.+.++. + ....|..+.+. ....|
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~-------~---~~~~~~~~~l~---~~~~D 73 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGV-------E---TTYTNYKDMID---TENID 73 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCC-------S---EEESCHHHHHT---TSCCS
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCC-------C---cccCCHHHHhc---CCCCC
Confidence 45699999998633 233344 444433345679998876554443321 1 23456666554 34689
Q ss_pred EEEEcCCC
Q 019187 203 AVIVDSSD 210 (345)
Q Consensus 203 vIi~D~~~ 210 (345)
+|++..+.
T Consensus 74 ~V~i~tp~ 81 (346)
T 3cea_A 74 AIFIVAPT 81 (346)
T ss_dssp EEEECSCG
T ss_pred EEEEeCCh
Confidence 98876553
No 417
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.97 E-value=1 Score=40.95 Aligned_cols=104 Identities=18% Similarity=0.258 Sum_probs=62.6
Q ss_pred CceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccc------c-CCCC-------CCEEEEEechH
Q 019187 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVA------V-GFED-------PRVTLHIGDGV 190 (345)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~------~-~~~~-------~rv~v~~~D~~ 190 (345)
.++|.+||+|.-+ ++..+++. ..+|+++|.+++.++.+++.+.... . .+.. .+++. ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 3689999998733 33444544 3489999999998887776521100 0 0000 12222 34433
Q ss_pred hHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 191 AFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 191 ~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+.+ ...|+||...+... -...++++.+...++|+.+++.++.+
T Consensus 81 ~~~-----~~aDlVi~av~~~~-----~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 81 QAV-----KDADLVIEAVPESL-----DLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp HHT-----TTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred HHh-----ccCCEEEEeccCcH-----HHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 332 34699997654321 01357888999999999888876544
No 418
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.83 E-value=0.78 Score=45.67 Aligned_cols=88 Identities=19% Similarity=0.256 Sum_probs=53.9
Q ss_pred CCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..++|+++|+|. |......++..+ .+|+++|.++.-.+.+++. . +++ .+..+.+ ...|+|
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~-G----------a~~--~~l~e~l-----~~aDvV 333 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMME-G----------FDV--VTVEEAI-----GDADIV 333 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-T----------CEE--CCHHHHG-----GGCSEE
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-C----------CEE--ecHHHHH-----hCCCEE
Confidence 568999999876 333444555554 4899999999877777652 1 111 2333333 347999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+.....+ .++.. ...+.|++||+++.-+
T Consensus 334 i~atgt~-----~~i~~----~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 334 VTATGNK-----DIIML----EHIKAMKDHAILGNIG 361 (494)
T ss_dssp EECSSSS-----CSBCH----HHHHHSCTTCEEEECS
T ss_pred EECCCCH-----HHHHH----HHHHhcCCCcEEEEeC
Confidence 8654221 22332 3445689999987644
No 419
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.70 E-value=0.87 Score=42.00 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=57.6
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh-HHhhCCCCCc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~~y 201 (345)
....+||++| +|-|..+..+++..+. +|+++.-++. .+.+++. .. + .++..+-.+ +.+. -..+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~-~~~~~~l-Ga-----~----~~i~~~~~~~~~~~--~~g~ 216 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRN-HAFLKAL-GA-----E----QCINYHEEDFLLAI--STPV 216 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHH-HHHHHHH-TC-----S----EEEETTTSCHHHHC--CSCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccch-HHHHHHc-CC-----C----EEEeCCCcchhhhh--ccCC
Confidence 4567999997 4557788888888655 7888874444 7777763 21 1 122222122 3322 2569
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|+-... .+..+.+.++|+++|.++.-.
T Consensus 217 D~v~d~~g-----------~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 217 DAVIDLVG-----------GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEEESSC-----------HHHHHHHGGGEEEEEEEEECC
T ss_pred CEEEECCC-----------cHHHHHHHHhccCCCEEEEeC
Confidence 98883321 133488899999999998753
No 420
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.59 E-value=2.5 Score=41.52 Aligned_cols=73 Identities=15% Similarity=0.267 Sum_probs=50.9
Q ss_pred CCceEEEEeccchHH-HHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGDGGV-LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~-~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~yD 202 (345)
..++|+++|||.-+. +...+.. ..+|..+|.|++-.+.+.+.++ +..+++||+.+ .|.+..-+..|
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l~---------~~~Vi~GD~td~~~L~ee~i~~~D 302 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEELE---------NTIVFCGDAADQELLTEENIDQVD 302 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHCT---------TSEEEESCTTCHHHHHHTTGGGCS
T ss_pred cccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHCC---------CceEEeccccchhhHhhcCchhhc
Confidence 467999999887332 2223333 3589999999988777666553 57899999965 56654347899
Q ss_pred EEEEcCC
Q 019187 203 AVIVDSS 209 (345)
Q Consensus 203 vIi~D~~ 209 (345)
+++.-..
T Consensus 303 ~~ia~T~ 309 (461)
T 4g65_A 303 VFIALTN 309 (461)
T ss_dssp EEEECCS
T ss_pred EEEEccc
Confidence 9996443
No 421
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.54 E-value=1.1 Score=41.03 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=61.0
Q ss_pred CceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccc----c-ccC-CCC------------CCEEEEE
Q 019187 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD----V-AVG-FED------------PRVTLHI 186 (345)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~----~-~~~-~~~------------~rv~v~~ 186 (345)
-++|.+||+|.-+ ++..+++. ..+|+++|.+++.++.+++.+.. . ..+ +.. .++++ .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 3689999999744 44455555 34899999999888876543211 0 001 111 13333 2
Q ss_pred echHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEecc
Q 019187 187 GDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (345)
Q Consensus 187 ~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~ 242 (345)
.|..+.+ ...|+||.-.+.... ...++++.+...++++.+++.++.
T Consensus 92 ~~~~~~~-----~~aD~Vi~avp~~~~-----~~~~v~~~l~~~~~~~~iv~s~ts 137 (302)
T 1f0y_A 92 TDAASVV-----HSTDLVVEAIVENLK-----VKNELFKRLDKFAAEHTIFASNTS 137 (302)
T ss_dssp SCHHHHT-----TSCSEEEECCCSCHH-----HHHHHHHHHTTTSCTTCEEEECCS
T ss_pred cCHHHhh-----cCCCEEEEcCcCcHH-----HHHHHHHHHHhhCCCCeEEEECCC
Confidence 3433222 346999976643210 124678888888998888876543
No 422
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.35 E-value=2 Score=40.71 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=72.7
Q ss_pred CceEEEEeccchHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhc------ccccccCCCCCCEEEEEechHhHHhhCCC
Q 019187 127 PKKVLVIGGGDGGVL--REVSRHSSVEKIDICEIDKMVVDVSKQF------FPDVAVGFEDPRVTLHIGDGVAFLKAVPE 198 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~--~~ll~~~~~~~V~~VEid~~vi~~ar~~------~~~~~~~~~~~rv~v~~~D~~~~l~~~~~ 198 (345)
..+|.+||+|.-+.+ ..+++. ..+|++++.+++.++..++. ++.. .+ .+++++ ..|..+.+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~--~l-~~~i~~-t~d~~ea~~---- 98 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNY--PF-PETLKA-YCDLKASLE---- 98 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTC--CC-CTTEEE-ESCHHHHHT----
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCC--cc-CCCeEE-ECCHHHHHh----
Confidence 468999999974443 334444 34799999999887776653 2211 11 123443 345444433
Q ss_pred CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhcCCcceEEEEEEeecC
Q 019187 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP 277 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F~~~v~~~~~~vP~y~ 277 (345)
..|+||+-.+.. ...+.++.+...|+++-+++.-........ ..+-+.+++.++. ..+....-|.+.
T Consensus 99 -~aDvVilaVp~~-------~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t---~~~se~i~~~l~~-~~~~vlsgP~~a 165 (356)
T 3k96_A 99 -GVTDILIVVPSF-------AFHEVITRMKPLIDAKTRIAWGTKGLAKGS---RLLHEVVATELGQ-VPMAVISGPSLA 165 (356)
T ss_dssp -TCCEEEECCCHH-------HHHHHHHHHGGGCCTTCEEEECCCSCBTTT---BCHHHHHHHHHCS-CCEEEEESSCCH
T ss_pred -cCCEEEECCCHH-------HHHHHHHHHHHhcCCCCEEEEEeCCCCcCc---cCHHHHHHHHcCC-CCEEEEECccHH
Confidence 369999765431 246788888889988877664332221111 2233344555532 333345567663
No 423
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=89.32 E-value=3.3 Score=35.75 Aligned_cols=72 Identities=8% Similarity=0.172 Sum_probs=45.0
Q ss_pred ceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh------HHhhCCCC
Q 019187 128 KKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA------FLKAVPEG 199 (345)
Q Consensus 128 ~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~------~l~~~~~~ 199 (345)
++||+.|++. +++++++++ ....+|.+++.+++-++...+.+. .++.++..|..+ .++.. .+
T Consensus 2 k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~-~~ 71 (230)
T 3guy_A 2 SLIVITGASS-GLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS--------NNVGYRARDLASHQEVEQLFEQL-DS 71 (230)
T ss_dssp -CEEEESTTS-HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS--------SCCCEEECCTTCHHHHHHHHHSC-SS
T ss_pred CEEEEecCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--------hccCeEeecCCCHHHHHHHHHHH-hh
Confidence 4678887664 555555443 113579999999887776655442 356677777643 33333 45
Q ss_pred CccEEEEcCC
Q 019187 200 TYDAVIVDSS 209 (345)
Q Consensus 200 ~yDvIi~D~~ 209 (345)
.+|++|..+.
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 6799998764
No 424
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.31 E-value=3.2 Score=38.82 Aligned_cols=109 Identities=18% Similarity=0.123 Sum_probs=57.5
Q ss_pred CCceEEEEeccchHHHHH-HHhcCCCcEEEEEECCHHHHHHHHhccccccc-CCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 126 NPKKVLVIGGGDGGVLRE-VSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~-ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
++.+|.+||+|.-+.+.. ++...+..+|+.+|++++.++.....+..... .....+++. ..|..+-++ .-|+
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~~ea~~-----~aDi 81 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSYEAALT-----GADC 81 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSHHHHHT-----TCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-eCCHHHHhC-----CCCE
Confidence 456899999987554333 22222333599999998766652221111000 001234443 256543343 2599
Q ss_pred EEEcCCCCCCCc--------cccC------cHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPA--------QELF------EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~--------~~l~------t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
||+-...|..+. ..+. -.++++.+.+.. |++++++-+
T Consensus 82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t 132 (331)
T 1pzg_A 82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVT 132 (331)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEc
Confidence 998663332221 1111 245667777664 899887543
No 425
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.24 E-value=1.1 Score=44.03 Aligned_cols=69 Identities=14% Similarity=0.230 Sum_probs=48.3
Q ss_pred CceEEEEeccchHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCcc
Q 019187 127 PKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYD 202 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~yD 202 (345)
.-+|+++|+|. ++..+++.- ....|+++|.|++.++.+.+.+ .+.++.||+.+ .|++..-+..|
T Consensus 3 ~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~~~L~~Agi~~ad 70 (461)
T 4g65_A 3 AMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------DLRVVNGHASHPDVLHEAGAQDAD 70 (461)
T ss_dssp CEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------SCEEEESCTTCHHHHHHHTTTTCS
T ss_pred cCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------CcEEEEEcCCCHHHHHhcCCCcCC
Confidence 35899999875 444444431 2457999999999988776654 26788999854 46654447789
Q ss_pred EEEEc
Q 019187 203 AVIVD 207 (345)
Q Consensus 203 vIi~D 207 (345)
+++.-
T Consensus 71 ~~ia~ 75 (461)
T 4g65_A 71 MLVAV 75 (461)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98863
No 426
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.21 E-value=2.9 Score=36.97 Aligned_cols=78 Identities=18% Similarity=0.228 Sum_probs=49.8
Q ss_pred CCceEEEEec-cchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------Hhh
Q 019187 126 NPKKVLVIGG-GDGG---VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKA 195 (345)
Q Consensus 126 ~~~~VL~IG~-G~G~---~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~ 195 (345)
+.++||+.|+ |.|. +++.+++. ..+|++++.++.-.+...+.+... ...++.++..|..+. ++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 4578999987 4432 34445555 358999999987766665555332 345899999987432 221
Q ss_pred C--CCCCccEEEEcCC
Q 019187 196 V--PEGTYDAVIVDSS 209 (345)
Q Consensus 196 ~--~~~~yDvIi~D~~ 209 (345)
. .-++.|++|..+.
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 1 0257899998765
No 427
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.06 E-value=1.9 Score=38.66 Aligned_cols=91 Identities=16% Similarity=0.122 Sum_probs=54.2
Q ss_pred ceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 128 KKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 128 ~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
++|.+||+|.=+ ++..+.+.....+|+++|.+++.++.+++. . ..+ ....|..+.+. ...|+|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g-----~~~----~~~~~~~~~~~----~~aDvVi 67 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-G-----IID----EGTTSIAKVED----FSPDFVM 67 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-T-----SCS----EEESCGGGGGG----TCCSEEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-C-----Ccc----cccCCHHHHhc----CCCCEEE
Confidence 479999998733 333344432123799999999888777643 1 110 11234333322 0579999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
+-.+.. ...+.++.+...|+++.+++.
T Consensus 68 lavp~~-------~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 68 LSSPVR-------TFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp ECSCHH-------HHHHHHHHHHHHSCTTCEEEE
T ss_pred EcCCHH-------HHHHHHHHHHhhCCCCcEEEE
Confidence 765432 134677778888998886665
No 428
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.06 E-value=1.5 Score=40.57 Aligned_cols=98 Identities=12% Similarity=0.254 Sum_probs=60.7
Q ss_pred CCCceEEEEeccc--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGGGD--GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~--G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
...++|-+||+|. ++++..++ . .-+|+++|.+++.++.+++.+... .+ .++++ ..|..+ +. .-|
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~l~~~--~~--~~i~~-~~~~~~-~~-----~aD 75 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQIPEE--LL--SKIEF-TTTLEK-VK-----DCD 75 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHSCGG--GG--GGEEE-ESSCTT-GG-----GCS
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHHHHHH--Hh--CCeEE-eCCHHH-Hc-----CCC
Confidence 3468999999996 34556666 4 358999999999999887763110 00 13442 234332 33 359
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+||...+.... ....+|..+... ||.+++.++.+
T Consensus 76 lVieavpe~~~-----vk~~l~~~l~~~--~~~IlasntSt 109 (293)
T 1zej_A 76 IVMEAVFEDLN-----TKVEVLREVERL--TNAPLCSNTSV 109 (293)
T ss_dssp EEEECCCSCHH-----HHHHHHHHHHTT--CCSCEEECCSS
T ss_pred EEEEcCcCCHH-----HHHHHHHHHhcC--CCCEEEEECCC
Confidence 99977655311 124667776655 88888877644
No 429
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=88.74 E-value=2.1 Score=41.73 Aligned_cols=109 Identities=15% Similarity=0.161 Sum_probs=62.1
Q ss_pred CceEEEEeccchHHHHH-HHhcCCCcEEEEEECCHHHHHHHHhcccccc-cCC------CCCCEEEEEechHhHHhhCCC
Q 019187 127 PKKVLVIGGGDGGVLRE-VSRHSSVEKIDICEIDKMVVDVSKQFFPDVA-VGF------EDPRVTLHIGDGVAFLKAVPE 198 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~-ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~-~~~------~~~rv~v~~~D~~~~l~~~~~ 198 (345)
-.+|.+||+|.-+.... ++.. .-+|+++|++++.++..++...... .++ ...++++ ..|..+.++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~~---- 108 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAYR---- 108 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHT----
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHHh----
Confidence 34899999987554333 2233 3589999999998887766321100 000 0113332 245444443
Q ss_pred CCccEEEEcCCCCCCC---cccc-CcHHHHHHHHhccCCCcEEEEeccch
Q 019187 199 GTYDAVIVDSSDPIGP---AQEL-FEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 199 ~~yDvIi~D~~~p~~~---~~~l-~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
.-|+||+..+.+... ...+ +-.+..+.+.. |++|-+++..++.+
T Consensus 109 -~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~ 156 (432)
T 3pid_A 109 -NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIP 156 (432)
T ss_dssp -TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCC
T ss_pred -CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 359999876654211 1111 23456678888 99988888755443
No 430
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=88.72 E-value=1.7 Score=45.40 Aligned_cols=104 Identities=20% Similarity=0.256 Sum_probs=65.7
Q ss_pred CceEEEEeccchHHHHH--HHhcCCCcEEEEEECCHHHHHHHHhcccccc---------cCC--CCCCEEEEEechHhHH
Q 019187 127 PKKVLVIGGGDGGVLRE--VSRHSSVEKIDICEIDKMVVDVSKQFFPDVA---------VGF--EDPRVTLHIGDGVAFL 193 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~--ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~---------~~~--~~~rv~v~~~D~~~~l 193 (345)
-++|-+||+|.-+.+.. ++.. .-.|+.+|++++.++.+++.....- ... ...+++ ..+-.+-+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 391 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR--FSSSTKEL 391 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEE--EESCGGGG
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhc--ccCcHHHH
Confidence 36999999998654444 4444 4689999999999888876543210 000 112222 22222223
Q ss_pred hhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 194 KAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 194 ~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
. ..|+||=..+... -..++.|+++-+.++|+.+|..|+.+.
T Consensus 392 ~-----~aDlVIEAV~E~l-----~iK~~vf~~le~~~~~~aIlASNTSsl 432 (742)
T 3zwc_A 392 S-----TVDLVVEAVFEDM-----NLKKKVFAELSALCKPGAFLCTNTSAL 432 (742)
T ss_dssp G-----SCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred h-----hCCEEEEeccccH-----HHHHHHHHHHhhcCCCCceEEecCCcC
Confidence 2 3588885443211 124689999999999999999988553
No 431
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=88.69 E-value=2.3 Score=39.39 Aligned_cols=95 Identities=18% Similarity=0.097 Sum_probs=59.6
Q ss_pred CceEEEEeccchHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCcc
Q 019187 127 PKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYD 202 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~--~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~yD 202 (345)
.++|+++|+| ..++.+++.- ... |+++|.|++.++ +++ ..+.++.+|+.+ .+++..-++.|
T Consensus 115 ~~~viI~G~G--~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-----------~~~~~i~gd~~~~~~L~~a~i~~a~ 179 (336)
T 1lnq_A 115 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKK-VLR-----------SGANFVHGDPTRVSDLEKANVRGAR 179 (336)
T ss_dssp -CEEEEESCC--HHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-----------TTCEEEESCTTSHHHHHHTCSTTEE
T ss_pred cCCEEEECCc--HHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-----------CCcEEEEeCCCCHHHHHhcChhhcc
Confidence 4589999975 5556655531 134 999999999887 654 146789999854 45544346799
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
.|++...+.. ..-..-...+.+.|+..++....+
T Consensus 180 ~vi~~~~~d~-------~n~~~~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 180 AVIVDLESDS-------ETIHCILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp EEEECCSSHH-------HHHHHHHHHHTTCTTSEEEEECSS
T ss_pred EEEEcCCccH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 9997654320 112333445667777666666543
No 432
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=88.51 E-value=0.54 Score=44.25 Aligned_cols=94 Identities=7% Similarity=0.070 Sum_probs=57.3
Q ss_pred CCCceEEEEeccc-hHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe-c-hHhHHhhCCC-C
Q 019187 125 PNPKKVLVIGGGD-GGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG-D-GVAFLKAVPE-G 199 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~ll~~~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~-D-~~~~l~~~~~-~ 199 (345)
...++||++|+|. |..+..+++.. +. +|++++.+++-.+.+++. .. + .++.- + ..+.+.+... .
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~v~~~~~g~ 253 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERL-GA------D---HVVDARRDPVKQVMELTRGR 253 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHT-TC------S---EEEETTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHh-CC------C---EEEeccchHHHHHHHHhCCC
Confidence 3467999999753 45566677765 54 899999999988988864 21 0 11111 1 1223333222 3
Q ss_pred CccEEEEcCCCCCCCccccCcHH--HHHHHHhccCCCcEEEEec
Q 019187 200 TYDAVIVDSSDPIGPAQELFEKP--FFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 200 ~yDvIi~D~~~p~~~~~~l~t~e--f~~~v~r~LkpgGvlv~~~ 241 (345)
.+|+||-.... .+ .++.+.+. ++|.++.-.
T Consensus 254 g~Dvvid~~G~----------~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 254 GVNVAMDFVGS----------QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp CEEEEEESSCC----------HHHHHHGGGGEE--EEEEEEECC
T ss_pred CCcEEEECCCC----------chHHHHHHHhhc--CCCEEEEEe
Confidence 69998833221 23 56666666 999988754
No 433
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.38 E-value=0.9 Score=45.02 Aligned_cols=104 Identities=22% Similarity=0.297 Sum_probs=63.8
Q ss_pred CceEEEEeccch--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccc-----cC-CCC-------CCEEEEEechHh
Q 019187 127 PKKVLVIGGGDG--GVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVA-----VG-FED-------PRVTLHIGDGVA 191 (345)
Q Consensus 127 ~~~VL~IG~G~G--~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~-----~~-~~~-------~rv~v~~~D~~~ 191 (345)
.++|.+||+|.- +++..+++. ..+|+++|++++.++.+++.....- .+ +.. .+++. ..|. +
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~-~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDI-H 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCH-H
Confidence 358999999973 345556655 2479999999999988766422110 00 000 13333 2332 2
Q ss_pred HHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccch
Q 019187 192 FLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (345)
Q Consensus 192 ~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~ 244 (345)
-+ ..-|+||.-.+... -...++++.+...++++.+++.++.+.
T Consensus 81 ~~-----~~aDlVIeAVpe~~-----~vk~~v~~~l~~~~~~~~IlasntSti 123 (483)
T 3mog_A 81 AL-----AAADLVIEAASERL-----EVKKALFAQLAEVCPPQTLLTTNTSSI 123 (483)
T ss_dssp GG-----GGCSEEEECCCCCH-----HHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred Hh-----cCCCEEEEcCCCcH-----HHHHHHHHHHHHhhccCcEEEecCCCC
Confidence 22 23599997654321 113578899999999999998876543
No 434
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.35 E-value=5.5 Score=34.64 Aligned_cols=78 Identities=13% Similarity=0.108 Sum_probs=48.1
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
+.++||+.|++. +++++++++ ....+|.+++.++.-.+...+.+.. ...++.++..|..+. ++..
T Consensus 4 ~~k~vlITGas~-gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 4 NEKVALVTGASR-GIGFEVAHALASKGATVVGTATSQASAEKFENSMKE-----KGFKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEecCCCHHHHHHHHHHHH
Confidence 346788887654 455554432 1145899999998776665554433 135788888887432 2211
Q ss_pred -CCCCccEEEEcCC
Q 019187 197 -PEGTYDAVIVDSS 209 (345)
Q Consensus 197 -~~~~yDvIi~D~~ 209 (345)
..++.|++|..+.
T Consensus 78 ~~~~~id~li~~Ag 91 (247)
T 3lyl_A 78 AENLAIDILVNNAG 91 (247)
T ss_dssp HTTCCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1357899998764
No 435
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.31 E-value=1.4 Score=35.53 Aligned_cols=84 Identities=20% Similarity=0.317 Sum_probs=47.5
Q ss_pred CceEEEEeccchHHHHHHHhc---CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEE-EEechHhHHhhCCCCCcc
Q 019187 127 PKKVLVIGGGDGGVLREVSRH---SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTL-HIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~---~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v-~~~D~~~~l~~~~~~~yD 202 (345)
.++|++||+| .+++.+++. .+. +|++++.+++-.+...+.+. ..+ ...|..+.+. ..|
T Consensus 21 ~~~v~iiG~G--~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~----------~~~~~~~~~~~~~~-----~~D 82 (144)
T 3oj0_A 21 GNKILLVGNG--MLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYE----------YEYVLINDIDSLIK-----NND 82 (144)
T ss_dssp CCEEEEECCS--HHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHT----------CEEEECSCHHHHHH-----TCS
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhC----------CceEeecCHHHHhc-----CCC
Confidence 6799999985 455554443 344 49999999876654333222 122 2334444443 379
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
+|+.-.+.+.. +.. ...|++|++++-
T Consensus 83 ivi~at~~~~~----~~~-------~~~l~~g~~vid 108 (144)
T 3oj0_A 83 VIITATSSKTP----IVE-------ERSLMPGKLFID 108 (144)
T ss_dssp EEEECSCCSSC----SBC-------GGGCCTTCEEEE
T ss_pred EEEEeCCCCCc----Eee-------HHHcCCCCEEEE
Confidence 99976554311 111 245777766654
No 436
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.25 E-value=2.4 Score=39.21 Aligned_cols=91 Identities=16% Similarity=0.177 Sum_probs=55.1
Q ss_pred CCceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 126 NPKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
...+|.+||+|.=+ +++.+++. ..+|+++|.+++.++...+. .++ ...|..+.++ ..|+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-----------g~~-~~~~~~e~~~-----~aDv 90 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-----------GAT-IHEQARAAAR-----DADI 90 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-----------TCE-EESSHHHHHT-----TCSE
T ss_pred CCCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-----------CCE-eeCCHHHHHh-----cCCE
Confidence 45699999999744 33445554 34799999999877765542 122 2345444443 3599
Q ss_pred EEEcCCCCCCCccccCcHHHHH--HHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFE--SVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~--~v~r~LkpgGvlv~~~ 241 (345)
||+-.+++.. ..+.+. .+...|++|.+++..+
T Consensus 91 Vi~~vp~~~~------~~~v~~~~~~~~~l~~~~~vi~~s 124 (320)
T 4dll_A 91 VVSMLENGAV------VQDVLFAQGVAAAMKPGSLFLDMA 124 (320)
T ss_dssp EEECCSSHHH------HHHHHTTTCHHHHCCTTCEEEECS
T ss_pred EEEECCCHHH------HHHHHcchhHHhhCCCCCEEEecC
Confidence 9977654211 123443 4556788877766544
No 437
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.24 E-value=2.4 Score=40.75 Aligned_cols=107 Identities=15% Similarity=0.117 Sum_probs=59.1
Q ss_pred eEEEEeccchHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhccccccc-CC------CCCCEEEEEechHhHHhhCCCC
Q 019187 129 KVLVIGGGDGGVL--REVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GF------EDPRVTLHIGDGVAFLKAVPEG 199 (345)
Q Consensus 129 ~VL~IG~G~G~~~--~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~------~~~rv~v~~~D~~~~l~~~~~~ 199 (345)
+|.+||+|.=+.. ..+++ + .+|+++|++++.++..++....... ++ ...++++ ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G-~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~~----- 72 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--Q-NEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAYK----- 72 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--T-SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHH-----
T ss_pred EEEEECCCHHHHHHHHHHhC--C-CEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEE-eCCHHHHhc-----
Confidence 6899999864433 23333 3 5899999999888776553211000 00 0112222 234333333
Q ss_pred CccEEEEcCCCCCC---Ccccc-CcHHHHHHHHhccCCCcEEEEeccchh
Q 019187 200 TYDAVIVDSSDPIG---PAQEL-FEKPFFESVAKALRPGGVVSTQAESIW 245 (345)
Q Consensus 200 ~yDvIi~D~~~p~~---~~~~l-~t~ef~~~v~r~LkpgGvlv~~~~s~~ 245 (345)
..|+||+..+.+.. ....+ +..+.++.+.. |+++.+++..+..+.
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~ 121 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPI 121 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCT
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCc
Confidence 35999987766521 11111 24567788888 898888776444443
No 438
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.19 E-value=2.7 Score=35.75 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=55.1
Q ss_pred eEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 129 KVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
+||+.|+ +|.+++++++. ....+|+++.-++.-.+.. ..++++++.+|..+.-... -+..|+||.
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~-~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-----------LGATVATLVKEPLVLTEAD-LDSVDAVVD 68 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------TCTTSEEEECCGGGCCHHH-HTTCSEEEE
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc-----------cCCCceEEecccccccHhh-cccCCEEEE
Confidence 5888875 45555555442 1135899999987654322 1246889999976532111 246899998
Q ss_pred cCCCCCCCccccCcHHHHHHHHhccCC-CcEEEEec
Q 019187 207 DSSDPIGPAQELFEKPFFESVAKALRP-GGVVSTQA 241 (345)
Q Consensus 207 D~~~p~~~~~~l~t~ef~~~v~r~Lkp-gGvlv~~~ 241 (345)
.+...+.+..........+.+.+.++. |+.++..+
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 765432211111123344555555554 45555543
No 439
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=88.09 E-value=4.2 Score=31.00 Aligned_cols=79 Identities=20% Similarity=0.216 Sum_probs=49.8
Q ss_pred CcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHh
Q 019187 150 VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAK 229 (345)
Q Consensus 150 ~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r 229 (345)
..+|..||-|+...+..++.+... + -.+ ....++.+.+.......+|+|++|..-+... ..++++.+++
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~--g---~~v-~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~-----g~~~~~~l~~ 75 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSL--G---ATT-VLAADGVDALELLGGFTPDLMICDIAMPRMN-----GLKLLEHIRN 75 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHT--T---CEE-EEESCHHHHHHHHTTCCCSEEEECCC----------CHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC--C---ceE-EEeCCHHHHHHHHhcCCCCEEEEecCCCCCC-----HHHHHHHHHh
Confidence 458999999999888888877653 1 123 3466777766554467799999998655322 2477888877
Q ss_pred ccCCCcEEEE
Q 019187 230 ALRPGGVVST 239 (345)
Q Consensus 230 ~LkpgGvlv~ 239 (345)
.-..--++++
T Consensus 76 ~~~~~~ii~~ 85 (130)
T 3eod_A 76 RGDQTPVLVI 85 (130)
T ss_dssp TTCCCCEEEE
T ss_pred cCCCCCEEEE
Confidence 5332234443
No 440
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.07 E-value=6.7 Score=35.49 Aligned_cols=108 Identities=10% Similarity=0.088 Sum_probs=61.2
Q ss_pred CCceEEEEeccch-HH----HHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------Hh
Q 019187 126 NPKKVLVIGGGDG-GV----LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LK 194 (345)
Q Consensus 126 ~~~~VL~IG~G~G-~~----~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~ 194 (345)
..+.||+.|+++| ++ ++.+++. ..+|.+++.++...+.+++..... +++.++..|..+. ++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEEL------GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHH------TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhc------CCceEEECCCCCHHHHHHHHH
Confidence 4578999997643 23 4445555 357999999976555554433321 3577888886432 22
Q ss_pred hC--CCCCccEEEEcCCCCC-----CCccccC--------------cHHHHHHHHhccCCCcEEEEec
Q 019187 195 AV--PEGTYDAVIVDSSDPI-----GPAQELF--------------EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 195 ~~--~~~~yDvIi~D~~~p~-----~~~~~l~--------------t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.. .-++.|++|.++.-.. .+..... ...+.+.+...|+.+|.++.-+
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 11 1257999998764321 1111111 1124455666777788777644
No 441
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.82 E-value=5 Score=38.79 Aligned_cols=107 Identities=16% Similarity=0.135 Sum_probs=59.9
Q ss_pred eEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhc-ccccccCCC--------CCCEEEEEechHhHHhhCC
Q 019187 129 KVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQF-FPDVAVGFE--------DPRVTLHIGDGVAFLKAVP 197 (345)
Q Consensus 129 ~VL~IG~G~G~~--~~~ll~~~~~~~V~~VEid~~vi~~ar~~-~~~~~~~~~--------~~rv~v~~~D~~~~l~~~~ 197 (345)
+|.+||+|.=+. +..+++. ..+|+++|++++.++..++. .+....++. ..+++. ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~--- 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVL--- 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHH---
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhc---
Confidence 689999987443 3445554 24799999999888876652 111000000 113332 334333333
Q ss_pred CCCccEEEEcCCCCCCC---ccccCcHHHHHHHHhccCC---CcEEEEeccc
Q 019187 198 EGTYDAVIVDSSDPIGP---AQELFEKPFFESVAKALRP---GGVVSTQAES 243 (345)
Q Consensus 198 ~~~yDvIi~D~~~p~~~---~~~l~t~ef~~~v~r~Lkp---gGvlv~~~~s 243 (345)
..|+||+..+.|... +.--+..+.++.+...|++ +.+++..++.
T Consensus 76 --~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv 125 (436)
T 1mv8_A 76 --DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTV 125 (436)
T ss_dssp --TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCC
T ss_pred --cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCc
Confidence 359999877655421 1111135667788888988 6666544333
No 442
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.68 E-value=10 Score=35.31 Aligned_cols=105 Identities=15% Similarity=0.125 Sum_probs=56.6
Q ss_pred CCceEEEEeccc-hHHH-HHHHhcCCCcEEEEEECCHHHHHH----HHhcccccccCCCCCCEEEEEechHhHHhhCCCC
Q 019187 126 NPKKVLVIGGGD-GGVL-REVSRHSSVEKIDICEIDKMVVDV----SKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEG 199 (345)
Q Consensus 126 ~~~~VL~IG~G~-G~~~-~~ll~~~~~~~V~~VEid~~vi~~----ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~ 199 (345)
.+.+|.+||+|. |... ..++...-..+++.+|++++.++. .+.-++.. ..++++..+|.. -+ .
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~-----~~~v~i~~~~~~-a~-----~ 72 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA-----PQPVKTSYGTYE-DC-----K 72 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS-----SSCCEEEEECGG-GG-----T
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc-----cCCeEEEeCcHH-Hh-----C
Confidence 457999999875 2322 224444334589999999876553 22223321 134566656532 22 3
Q ss_pred CccEEEEcCCCCCCCc---cccC--cHHHHHHHHhc---cCCCcEEEEec
Q 019187 200 TYDAVIVDSSDPIGPA---QELF--EKPFFESVAKA---LRPGGVVSTQA 241 (345)
Q Consensus 200 ~yDvIi~D~~~p~~~~---~~l~--t~ef~~~v~r~---LkpgGvlv~~~ 241 (345)
..|+||+-...|..+. ..|+ +...++.+.+. ..|++++++-+
T Consensus 73 ~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 73 DADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 3699998665444332 1222 11233333322 36899877654
No 443
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.68 E-value=1.5 Score=40.86 Aligned_cols=104 Identities=10% Similarity=0.090 Sum_probs=63.3
Q ss_pred CceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhccccc-----ccCCCC---------CCEEEEEechH
Q 019187 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-----AVGFED---------PRVTLHIGDGV 190 (345)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~-----~~~~~~---------~rv~v~~~D~~ 190 (345)
.++|.+||+|.=+ ++..+++. .-+|+++|++++.++.+++..... ..++-. .++++ ..|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 4689999999733 44555655 347999999999888876532110 001111 13443 24433
Q ss_pred hHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 191 AFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 191 ~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
+.+ ..-|+||...+... -...++|+.+...++|+.+++.++.+
T Consensus 83 eav-----~~aDlVieavpe~~-----~~k~~v~~~l~~~~~~~~Ii~s~tS~ 125 (319)
T 2dpo_A 83 EAV-----EGVVHIQECVPENL-----DLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp HHT-----TTEEEEEECCCSCH-----HHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred HHH-----hcCCEEEEeccCCH-----HHHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 333 34699997664321 11357889999999999888766543
No 444
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=87.57 E-value=4.3 Score=35.87 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=48.4
Q ss_pred CceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC--
Q 019187 127 PKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV-- 196 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~-- 196 (345)
.++||+.|++ |+++++++++ ....+|.+++.+++-.+.+.+.+.. ...++.++..|..+. ++..
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ-----FPGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----STTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4678877765 4455554442 1145899999998877766655543 235788888887432 2111
Q ss_pred CCCCccEEEEcCC
Q 019187 197 PEGTYDAVIVDSS 209 (345)
Q Consensus 197 ~~~~yDvIi~D~~ 209 (345)
.-++.|++|.++.
T Consensus 80 ~~g~id~lv~nAg 92 (257)
T 3imf_A 80 KFGRIDILINNAA 92 (257)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 0257899998764
No 445
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.43 E-value=5.7 Score=36.76 Aligned_cols=107 Identities=18% Similarity=0.273 Sum_probs=56.2
Q ss_pred CCceEEEEeccchHHHHH--HHhcCCCcEEEEEECCHHHHHH-HHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGDGGVLRE--VSRHSSVEKIDICEIDKMVVDV-SKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~--ll~~~~~~~V~~VEid~~vi~~-ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.+.+|.+||+|.-+.+.. ++...-..++..+|++++.++. +.. +.... .+...++++..++ .+-++ .-|
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~d-l~~~~-~~~~~~~~v~~~~-~~a~~-----~aD 76 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMD-LKHAT-PYSPTTVRVKAGE-YSDCH-----DAD 76 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHH-HHHHG-GGSSSCCEEEECC-GGGGT-----TCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhh-HHhhh-hhcCCCeEEEeCC-HHHhC-----CCC
Confidence 356999999976544332 3333334689999999865442 211 11100 1112345555544 22233 359
Q ss_pred EEEEcCCCCCCCcc---c--cCcHHHH----HHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPAQ---E--LFEKPFF----ESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~~---~--l~t~ef~----~~v~r~LkpgGvlv~~~ 241 (345)
+||+-...|..+.. . ..+...+ +.+.+. +|+|++++-+
T Consensus 77 vVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 77 LVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 99987655543321 1 1112333 344444 8999988843
No 446
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.38 E-value=0.98 Score=40.59 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=24.4
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK 160 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~ 160 (345)
..+||++|+|+ |......+...++.+++.+|-|.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999975 44444434445788999999874
No 447
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.36 E-value=4.7 Score=36.71 Aligned_cols=89 Identities=11% Similarity=0.048 Sum_probs=50.7
Q ss_pred CCceEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-echHhHHhhCCCCCccE
Q 019187 126 NPKKVLVIGGGDGG-VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~-~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~~yDv 203 (345)
..++|++||+|.=+ .....++..+. +|+++|.++.-.+.+++. . ++.+. .+..+. -...|+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~-g----------~~~~~~~~l~~~-----l~~aDv 216 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEM-G----------MEPFHISKAAQE-----LRDVDV 216 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT-T----------SEEEEGGGHHHH-----TTTCSE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHC-C----------CeecChhhHHHH-----hcCCCE
Confidence 46899999987522 22223344444 899999998765544331 1 12221 222222 245899
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+...+. .+...+. .+.++++++++--+
T Consensus 217 Vi~~~p~------~~i~~~~----l~~mk~~~~lin~a 244 (293)
T 3d4o_A 217 CINTIPA------LVVTANV----LAEMPSHTFVIDLA 244 (293)
T ss_dssp EEECCSS------CCBCHHH----HHHSCTTCEEEECS
T ss_pred EEECCCh------HHhCHHH----HHhcCCCCEEEEec
Confidence 9977643 2334433 34688988877544
No 448
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=87.25 E-value=3.6 Score=32.46 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=51.6
Q ss_pred cEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhc
Q 019187 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKA 230 (345)
Q Consensus 151 ~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~ 230 (345)
.+|..||-|+...+..++.+... .....-....++.+.+.......+|+|++|...+... ..++++.+++.
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~----~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~-----g~~~~~~l~~~ 91 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQ----PDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT-----GLEVLEWIRSE 91 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTS----TTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSC-----HHHHHHHHHHT
T ss_pred cEEEEEcCCHHHHHHHHHHHHhC----CCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCc-----HHHHHHHHHHh
Confidence 47999999999988888877642 1111233456666666554467799999998765432 34778887775
Q ss_pred cCCCcEEEE
Q 019187 231 LRPGGVVST 239 (345)
Q Consensus 231 LkpgGvlv~ 239 (345)
.++-.+++
T Consensus 92 -~~~~~ii~ 99 (150)
T 4e7p_A 92 -KLETKVVV 99 (150)
T ss_dssp -TCSCEEEE
T ss_pred -CCCCeEEE
Confidence 34444444
No 449
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.17 E-value=2.1 Score=38.65 Aligned_cols=89 Identities=18% Similarity=0.149 Sum_probs=54.1
Q ss_pred ceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEE
Q 019187 128 KKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (345)
Q Consensus 128 ~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi 205 (345)
.+|.+||+|.-+ ++..+++.....+|+++|.+++.++.+++. .. .+ ....|..+.+ ...|+||
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~-----~~----~~~~~~~~~~-----~~aDvVi 71 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GI-----VD----EATADFKVFA-----ALADVII 71 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TS-----CS----EEESCTTTTG-----GGCSEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CC-----cc----cccCCHHHhh-----cCCCEEE
Confidence 589999998733 344455543235899999999887766552 11 10 1223322222 3469999
Q ss_pred EcCCCCCCCccccCcHHHHHHHHhc-cCCCcEEE
Q 019187 206 VDSSDPIGPAQELFEKPFFESVAKA-LRPGGVVS 238 (345)
Q Consensus 206 ~D~~~p~~~~~~l~t~ef~~~v~r~-LkpgGvlv 238 (345)
+-.+.. . ..+.++.+... |+++.+++
T Consensus 72 lavp~~-----~--~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVPIK-----K--TIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ECSCHH-----H--HHHHHHHHHTSCCCTTCEEE
T ss_pred EcCCHH-----H--HHHHHHHHHhcCCCCCCEEE
Confidence 765432 1 25677888888 88876665
No 450
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.97 E-value=5.5 Score=37.66 Aligned_cols=94 Identities=12% Similarity=0.141 Sum_probs=61.8
Q ss_pred CceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+|.+||+|.-+ +++.+++. ..+|+++|.+++.++.+.+. .+. ...|..+.++.. +..|+|
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~-----------g~~-~~~s~~e~~~~a--~~~DvV 85 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE-----------GIA-GARSIEEFCAKL--VKPRVV 85 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-----------TCB-CCSSHHHHHHHS--CSSCEE
T ss_pred CCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-----------CCE-EeCCHHHHHhcC--CCCCEE
Confidence 3689999998644 34445555 35899999999877766542 011 123555666543 457999
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
|+-.+.+ ...+.++.+...|++|.+++-.+.+
T Consensus 86 i~~vp~~-------~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 86 WLMVPAA-------VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp EECSCGG-------GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred EEeCCHH-------HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 9876543 1457788888999988777654433
No 451
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.97 E-value=0.78 Score=43.43 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=24.5
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK 160 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~ 160 (345)
..+||+||+|+ |......+...++.+++.||-|.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 57999999985 44333333345789999999875
No 452
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.87 E-value=4.4 Score=35.77 Aligned_cols=78 Identities=15% Similarity=0.111 Sum_probs=48.2
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..+.||+.|++.| +++++++. ....+|.+++.+++-++.+.+.+... ..++.++..|..+. ++..
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 4567888887654 55554442 11358999999987666555544431 35788888887432 2111
Q ss_pred CCCCccEEEEcCC
Q 019187 197 PEGTYDAVIVDSS 209 (345)
Q Consensus 197 ~~~~yDvIi~D~~ 209 (345)
..++.|++|.++.
T Consensus 80 ~~g~id~lv~nAg 92 (252)
T 3h7a_A 80 AHAPLEVTIFNVG 92 (252)
T ss_dssp HHSCEEEEEECCC
T ss_pred hhCCceEEEECCC
Confidence 0157899998765
No 453
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.79 E-value=0.67 Score=43.33 Aligned_cols=47 Identities=15% Similarity=0.038 Sum_probs=39.4
Q ss_pred CCCceEEEEeccchHHHHHHHhcCCCcEEEEEECCH---HHHHHHHhccccc
Q 019187 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDK---MVVDVSKQFFPDV 173 (345)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid~---~vi~~ar~~~~~~ 173 (345)
.....|||--||+|.++.++.+. ..+.+++|+++ ..++++++.+...
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 45678999999999999998887 46899999999 9999999988643
No 454
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.70 E-value=5.9 Score=35.51 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=47.5
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..+.||+.|++. +++++++++ ....+|.+++.+++-++...+.+.. ...++.++..|..+. ++..
T Consensus 23 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 23 RPQTAFVTGVSS-GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA-----AGHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 346788887654 455554442 1145899999998776665554443 235788888887432 2211
Q ss_pred -CCCCccEEEEcCC
Q 019187 197 -PEGTYDAVIVDSS 209 (345)
Q Consensus 197 -~~~~yDvIi~D~~ 209 (345)
.-++.|++|.++.
T Consensus 97 ~~~g~id~lv~nAg 110 (279)
T 3sju_A 97 ERFGPIGILVNSAG 110 (279)
T ss_dssp HHHCSCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 0257899998764
No 455
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=86.67 E-value=3.2 Score=38.63 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=55.6
Q ss_pred CceEEEEeccchHHH-HHHHhcCCCcEEEEEECCHHHHHHHHhccccccc-CCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 127 PKKVLVIGGGDGGVL-REVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~-~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
..+|.+||+|.=+.+ ..++...+..+|+.+|++++.++.....+..... .....+++.. .|. +-++ .-|+|
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~-~al~-----~aD~V 76 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY-DDLA-----GADVV 76 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG-GGGT-----TCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH-HHhC-----CCCEE
Confidence 358999999763333 2333333343599999998766643322221100 0012233321 553 3333 35999
Q ss_pred EEcCCCCCCCc--------ccc------CcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPA--------QEL------FEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~--------~~l------~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+-...|..+. ..+ .-.++++.+.+.. |++++++-+
T Consensus 77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t 126 (322)
T 1t2d_A 77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVT 126 (322)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 98764332221 111 1245666666664 999887643
No 456
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=86.63 E-value=15 Score=40.72 Aligned_cols=150 Identities=13% Similarity=0.133 Sum_probs=89.4
Q ss_pred CceEEEEeccchHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh----------
Q 019187 127 PKKVLVIGGGDGGVLREVSRHSSV-EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA---------- 195 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~~~~~-~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~---------- 195 (345)
.-++++|-||.|++..-+.+. +. .-+.++|+|+..++.-+.+++. ..++.+|...++..
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N~p~---------~~~~~~DI~~l~~~~~~gdi~~~~ 920 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNNPG---------TTVFTEDCNVLLKLVMAGEVTNSL 920 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHHCTT---------SEEECSCHHHHHHHHTTTCSBCSS
T ss_pred CceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCCC---------CcEeeccHHHHhHhhhccchhhhh
Confidence 458999999999999988766 34 4688999999999998887753 45677787665421
Q ss_pred ---CC-CCCccEEEEcCCCCC-CCccc------------cCcHHHHHHHHhccCCCcEEEEeccchhh--hhhHHHHHHH
Q 019187 196 ---VP-EGTYDAVIVDSSDPI-GPAQE------------LFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVA 256 (345)
Q Consensus 196 ---~~-~~~yDvIi~D~~~p~-~~~~~------------l~t~ef~~~v~r~LkpgGvlv~~~~s~~~--~~~~~~~i~~ 256 (345)
.+ .+..|+|+..++... ..+.. |+ .+|++ +.+.++|.-+++=|...... ....+..+++
T Consensus 921 ~~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~-~~~lr-iv~~~rPk~fv~ENV~glls~~~g~~~~~il~ 998 (1330)
T 3av4_A 921 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV-VSFLS-YCDYYRPRFFLLENVRNFVSYRRSMVLKLTLR 998 (1330)
T ss_dssp CCBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHH-HHHHH-HHHHHCCSEEEEEEEGGGGTTTTTHHHHHHHH
T ss_pred hhhccccCccceEEecCCCcccccccccccccccchhhHHH-HHHHH-HHHHhcCcEEEEeccHHHhccCccHHHHHHHH
Confidence 11 246899997655422 11111 11 13333 44568898777766644332 1235666666
Q ss_pred HHHhhcCCcceEEEEEEeecCCC---cEEEEEEecC
Q 019187 257 NCRQIFKGSVNYAWTTVPTYPSG---VIGFMLCSTE 289 (345)
Q Consensus 257 ~l~~~F~~~v~~~~~~vP~y~~g---~w~~~~ask~ 289 (345)
.+... ...+.+.....-.|.-- .-.|++|.+.
T Consensus 999 ~L~~l-GY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~ 1033 (1330)
T 3av4_A 999 CLVRM-GYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1033 (1330)
T ss_dssp HHHHH-TCEEEEEEEEGGGGSCSBCCEEEEEEEECT
T ss_pred HHHhc-CCeeeEEEecHHHcCCCccccEEEEEEecC
Confidence 66653 12233322333334111 2478888754
No 457
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=86.57 E-value=5.2 Score=34.97 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=60.2
Q ss_pred CCceEEEEeccchHHHHHHHhc--C-CCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--S-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~-~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~ 196 (345)
+.++||+.|+ +|+++++++++ . ...+|++++.++.-.+...+.+... ..++.++..|..+. ++..
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 3467887774 46666665542 1 2458999999976555444444321 24678888886432 1111
Q ss_pred --CCCCccEEEEcCCCCCCCcccc---------C------cHHHHHHHHhccCCCcEEEEec
Q 019187 197 --PEGTYDAVIVDSSDPIGPAQEL---------F------EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 197 --~~~~yDvIi~D~~~p~~~~~~l---------~------t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.-+..|+||..+.......... + +..+.+.+.+.++++|.++.-+
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 0147899998664321110000 0 1224455666666677776654
No 458
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.36 E-value=2.6 Score=33.03 Aligned_cols=96 Identities=17% Similarity=0.189 Sum_probs=50.8
Q ss_pred CceEEEEeccchHHHHHHHh---cCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh--HHhhCCCCCc
Q 019187 127 PKKVLVIGGGDGGVLREVSR---HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTY 201 (345)
Q Consensus 127 ~~~VL~IG~G~G~~~~~ll~---~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~~y 201 (345)
.++|+++|+|. ++..+++ ..+ .+|+++|.+++-++.+++. ...++.+|..+ .+.+..-+.+
T Consensus 6 ~~~v~I~G~G~--iG~~~a~~l~~~g-~~v~~~d~~~~~~~~~~~~-----------~~~~~~~d~~~~~~l~~~~~~~~ 71 (144)
T 2hmt_A 6 NKQFAVIGLGR--FGGSIVKELHRMG-HEVLAVDINEEKVNAYASY-----------ATHAVIANATEENELLSLGIRNF 71 (144)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTT-CCCEEEESCHHHHHTTTTT-----------CSEEEECCTTCHHHHHTTTGGGC
T ss_pred CCcEEEECCCH--HHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHh-----------CCEEEEeCCCCHHHHHhcCCCCC
Confidence 35799999754 4443332 223 4799999998765433221 12455666532 2332213568
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccc
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s 243 (345)
|+|+.....+.. .........+.+.++ .++....+
T Consensus 72 d~vi~~~~~~~~------~~~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 72 EYVIVAIGANIQ------ASTLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp SEEEECCCSCHH------HHHHHHHHHHHTTCS-EEEEECCS
T ss_pred CEEEECCCCchH------HHHHHHHHHHHcCCC-eEEEEeCC
Confidence 999976543200 112233444556775 55554433
No 459
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.30 E-value=1.6 Score=39.21 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=48.4
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH---Hhh----C
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF---LKA----V 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~---l~~----~ 196 (345)
..+.||+.|++ |+++++++++ ....+|++++.++.-.+.+.+.+... ...++.++..|..+. ++. .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHHH
Confidence 45678877765 4555555442 11358999999987665555544332 335789998887543 111 1
Q ss_pred --CCCCccEEEEcCC
Q 019187 197 --PEGTYDAVIVDSS 209 (345)
Q Consensus 197 --~~~~yDvIi~D~~ 209 (345)
..++.|++|.++.
T Consensus 86 ~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 86 KTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHhCCCCCEEEECCc
Confidence 0257999998765
No 460
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.29 E-value=4.3 Score=37.07 Aligned_cols=89 Identities=11% Similarity=0.137 Sum_probs=51.1
Q ss_pred CCceEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEE-echHhHHhhCCCCCccE
Q 019187 126 NPKKVLVIGGGDGG-VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~-~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~~yDv 203 (345)
..++|++||+|.=+ .....++..+ .+|+++|.++.-.+.+++. . ++.+. .+..+. -...|+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~~~~~~~~~~~~-g----------~~~~~~~~l~~~-----l~~aDv 218 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALG-ANVKVGARSSAHLARITEM-G----------LVPFHTDELKEH-----VKDIDI 218 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-T----------CEEEEGGGHHHH-----STTCSE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHC-C----------CeEEchhhHHHH-----hhCCCE
Confidence 46899999987522 2222333344 4899999998655544331 1 12221 232222 245899
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+...+. .++..+ ..+.+++|++++--+
T Consensus 219 Vi~~~p~------~~i~~~----~~~~mk~g~~lin~a 246 (300)
T 2rir_A 219 CINTIPS------MILNQT----VLSSMTPKTLILDLA 246 (300)
T ss_dssp EEECCSS------CCBCHH----HHTTSCTTCEEEECS
T ss_pred EEECCCh------hhhCHH----HHHhCCCCCEEEEEe
Confidence 9977654 233433 346789988776544
No 461
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.28 E-value=5 Score=35.56 Aligned_cols=79 Identities=15% Similarity=0.154 Sum_probs=48.8
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..++||+.|++ |++++++++. ....+|.+++.+++-++.+.+.+... ...++.++..|..+. ++..
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----GSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----SSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45677877765 4555555443 11358999999987766655544432 235788888887432 1111
Q ss_pred -CCCCccEEEEcCC
Q 019187 197 -PEGTYDAVIVDSS 209 (345)
Q Consensus 197 -~~~~yDvIi~D~~ 209 (345)
.-++.|++|.++.
T Consensus 84 ~~~g~id~lvnnAg 97 (262)
T 3pk0_A 84 EEFGGIDVVCANAG 97 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 0247899998764
No 462
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.26 E-value=5.5 Score=36.16 Aligned_cols=79 Identities=11% Similarity=0.156 Sum_probs=49.5
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..+.||+.|+++ ++++++++. ....+|.+++.++.-++.+.+.+.. ...++.++..|..+. ++..
T Consensus 30 ~gk~vlVTGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVVTGGAS-GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-----QGFDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 456788887664 455554442 1135899999998877766555543 235788888887442 1111
Q ss_pred -CCCCccEEEEcCCC
Q 019187 197 -PEGTYDAVIVDSSD 210 (345)
Q Consensus 197 -~~~~yDvIi~D~~~ 210 (345)
..+..|++|.++..
T Consensus 104 ~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 104 RLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHSSCSEEEECCCC
T ss_pred HhCCCCCEEEECCCc
Confidence 02478999987653
No 463
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.25 E-value=7.1 Score=35.23 Aligned_cols=110 Identities=21% Similarity=0.264 Sum_probs=61.1
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHH-HHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKM-VVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~-vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~ 196 (345)
+.++||+.|++. +++++++++ ....+|.+++.++. ..+...+.+.. ...++.++..|..+. ++..
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-----EGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-----TTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 356788887654 455555443 12458999998854 34444443332 235788888887432 2111
Q ss_pred --CCCCccEEEEcCCCC--CCCccccC--------------cHHHHHHHHhccCCCcEEEEec
Q 019187 197 --PEGTYDAVIVDSSDP--IGPAQELF--------------EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 197 --~~~~yDvIi~D~~~p--~~~~~~l~--------------t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.-++.|++|.++... ..+...+- ...+.+.+...|+.+|.++.-+
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 125789999875432 11111110 1234556667788888777654
No 464
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=86.24 E-value=21 Score=37.12 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=35.5
Q ss_pred ceEEEEeccchHHHHHHHhcC-----CCcEEEEEECCHHHHHHHHhcccc
Q 019187 128 KKVLVIGGGDGGVLREVSRHS-----SVEKIDICEIDKMVVDVSKQFFPD 172 (345)
Q Consensus 128 ~~VL~IG~G~G~~~~~ll~~~-----~~~~V~~VEid~~vi~~ar~~~~~ 172 (345)
.+|+||-||.|++..-+.+.. ...-+.++|+|+..++.-+.+++.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~ 262 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ 262 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC
Confidence 479999999999887765531 134578999999999999988753
No 465
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=86.15 E-value=5.4 Score=36.66 Aligned_cols=67 Identities=13% Similarity=0.186 Sum_probs=42.4
Q ss_pred ceEEEEeccchH--HHHHHHhcCCCcEEE-EEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 128 KKVLVIGGGDGG--VLREVSRHSSVEKID-ICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 128 ~~VL~IG~G~G~--~~~~ll~~~~~~~V~-~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.+|.+||+|.-+ .+..+.+.+. .+++ ++|.+++..+...+.+. +. ..|..+.+. +...|+|
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~-~~l~av~d~~~~~~~~~~~~~~----------~~--~~~~~~~l~---~~~~D~V 67 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNAD-ARLVAVADAFPAAAEAIAGAYG----------CE--VRTIDAIEA---AADIDAV 67 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTT-EEEEEEECSSHHHHHHHHHHTT----------CE--ECCHHHHHH---CTTCCEE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCC-cEEEEEECCCHHHHHHHHHHhC----------CC--cCCHHHHhc---CCCCCEE
Confidence 489999998633 2333445554 4555 68999887665444331 22 567777765 3458999
Q ss_pred EEcCCC
Q 019187 205 IVDSSD 210 (345)
Q Consensus 205 i~D~~~ 210 (345)
++-.+.
T Consensus 68 ~i~tp~ 73 (331)
T 4hkt_A 68 VICTPT 73 (331)
T ss_dssp EECSCG
T ss_pred EEeCCc
Confidence 986654
No 466
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=85.78 E-value=3.8 Score=31.98 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=47.3
Q ss_pred cEEEEEECCHHHHHHHHhcccccccCCCCCCE-EEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHh
Q 019187 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRV-TLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAK 229 (345)
Q Consensus 151 ~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv-~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r 229 (345)
.+|..||-|+...+..++.+... .... -....++.+.+.......+|+|++|...+... ..++++.+++
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~-----~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~-----g~~~~~~lr~ 75 (144)
T 3kht_A 6 KRVLVVEDNPDDIALIRRVLDRK-----DIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIAN-----GFEVMSAVRK 75 (144)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHT-----TCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGC-----HHHHHHHHHS
T ss_pred CEEEEEeCCHHHHHHHHHHHHhc-----CCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCC-----HHHHHHHHHh
Confidence 47899999999988888877653 1232 34456676666555467799999998654322 2467777776
No 467
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.67 E-value=11 Score=33.28 Aligned_cols=110 Identities=18% Similarity=0.097 Sum_probs=60.2
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECC------------HHHHHHHHhcccccccCCCCCCEEEEEechHh
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEID------------KMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA 191 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid------------~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~ 191 (345)
..++||+.|++. ++++++++. ....+|++++.+ ..-++.+...+.. ...++.++..|..+
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-----TGRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-----TTSCEEEEECCTTC
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh-----cCCceEEEEccCCC
Confidence 356788877664 455554442 114689999987 5544444443332 23578888888743
Q ss_pred H------HhhC--CCCCccEEEEcCCCCCCCc---cc----cC------cHHHHHHHHhccCCCcEEEEec
Q 019187 192 F------LKAV--PEGTYDAVIVDSSDPIGPA---QE----LF------EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 192 ~------l~~~--~~~~yDvIi~D~~~p~~~~---~~----l~------t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
. ++.. .-++.|++|.++.-..... .. .+ ...+.+.+...|+.+|.++.-+
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 2 2211 0247899998764321110 00 00 1123455666777788876644
No 468
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=85.60 E-value=6.1 Score=34.70 Aligned_cols=79 Identities=15% Similarity=0.172 Sum_probs=46.3
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech--H------hHHhh
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG--V------AFLKA 195 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~--~------~~l~~ 195 (345)
+.+.||+.|++. +++++++++ ....+|++++.+++-++...+.+... ...++.++..|. . +.++.
T Consensus 11 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGASD-GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE----TGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----HSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----cCCCceEEEEecccCCHHHHHHHHHH
Confidence 356788777654 555554442 11458999999987766555444322 123567777776 1 11211
Q ss_pred C--CCCCccEEEEcCC
Q 019187 196 V--PEGTYDAVIVDSS 209 (345)
Q Consensus 196 ~--~~~~yDvIi~D~~ 209 (345)
. .-++.|++|.++.
T Consensus 86 ~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHCSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 1357999998764
No 469
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=85.52 E-value=2.9 Score=39.09 Aligned_cols=95 Identities=12% Similarity=0.115 Sum_probs=55.0
Q ss_pred CCCceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHH---HHHHHHhcccccccCCCCCCEEEEEech--HhHHhhCC
Q 019187 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKM---VVDVSKQFFPDVAVGFEDPRVTLHIGDG--VAFLKAVP 197 (345)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~---vi~~ar~~~~~~~~~~~~~rv~v~~~D~--~~~l~~~~ 197 (345)
....+||++|+ |.|..+..+++..+...|..++.++. -.+.+++. .. + .++..+- .+-+.+..
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSL-GA------E---HVITEEELRRPEMKNFF 235 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHT-TC------S---EEEEHHHHHSGGGGGTT
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhc-CC------c---EEEecCcchHHHHHHHH
Confidence 35679999995 55778888888766656677776543 45666653 21 1 1222110 01122211
Q ss_pred C--CCccEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEe
Q 019187 198 E--GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 198 ~--~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~ 240 (345)
. +.+|+|+ |+.. . +....+.++|+++|.++.-
T Consensus 236 ~~~~~~Dvvi-d~~g---~-------~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 236 KDMPQPRLAL-NCVG---G-------KSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp SSSCCCSEEE-ESSC---H-------HHHHHHHTTSCTTCEEEEC
T ss_pred hCCCCceEEE-ECCC---c-------HHHHHHHHhhCCCCEEEEE
Confidence 2 2499887 3321 1 2234578999999999875
No 470
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=85.52 E-value=0.71 Score=43.70 Aligned_cols=57 Identities=16% Similarity=0.275 Sum_probs=33.1
Q ss_pred eeccchhHHHHHHHhccccc--CCCCceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 019187 104 LTERDECAYQEMITHLPLCS--IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK 160 (345)
Q Consensus 104 ~~~~de~~Y~e~l~~l~l~~--~~~~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~ 160 (345)
+++.+...|.+.+..+.... .-...+||++|+|+ |.-....+-..++.+++.+|-|.
T Consensus 11 l~~~~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 11 ISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCHHHHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 45555667876553321110 01356999999874 33333323334789999999774
No 471
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=85.47 E-value=0.7 Score=47.11 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=24.8
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK 160 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~ 160 (345)
..+||+||+|+ |..+...+...++.+++.||-|.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 56999999985 44333334445799999999985
No 472
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.35 E-value=16 Score=33.54 Aligned_cols=107 Identities=19% Similarity=0.203 Sum_probs=56.6
Q ss_pred CCceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHH-HHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDV-SKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~-ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
.+.+|.+||+|.=+ ++..++......+|..+|++++..+. +.. +... ..+....+++..++ .+-+ ...|
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~d-l~~~-~~~~~~~~~i~~~~-~~al-----~~aD 76 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD-FNHG-KVFAPKPVDIWHGD-YDDC-----RDAD 76 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-HHHH-TTSSSSCCEEEECC-GGGT-----TTCS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhh-HHHH-hhhcCCCeEEEcCc-HHHh-----CCCC
Confidence 45799999997633 33334444335689999999875443 222 1111 01122245665444 2222 3469
Q ss_pred EEEEcCCCCCCCc---cccC------cHHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGPA---QELF------EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~~---~~l~------t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+||+-..-+..+. ..+. -.++.+.+.+. .|++++++-+
T Consensus 77 vViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~t 123 (316)
T 1ldn_A 77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVAT 123 (316)
T ss_dssp EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEECS
T ss_pred EEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEeC
Confidence 9998665443221 1111 13445555554 5899877643
No 473
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=85.30 E-value=7.5 Score=36.21 Aligned_cols=70 Identities=23% Similarity=0.134 Sum_probs=43.5
Q ss_pred CCceEEEEeccchHH---HHHHHhcCCCcEEE-EEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCc
Q 019187 126 NPKKVLVIGGGDGGV---LREVSRHSSVEKID-ICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~---~~~ll~~~~~~~V~-~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~y 201 (345)
++.||.+||+|.-+. +..+.+.+.. +++ ++|.+++..+...+.+. +... .|..+.+. +...
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g----------~~~~-~~~~~ll~---~~~~ 90 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFG----------GEPV-EGYPALLE---RDDV 90 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHC----------SEEE-ESHHHHHT---CTTC
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcC----------CCCc-CCHHHHhc---CCCC
Confidence 346899999986432 3445555544 554 77999876554433332 2233 77777765 4568
Q ss_pred cEEEEcCCC
Q 019187 202 DAVIVDSSD 210 (345)
Q Consensus 202 DvIi~D~~~ 210 (345)
|+|++-.+.
T Consensus 91 D~V~i~tp~ 99 (350)
T 3rc1_A 91 DAVYVPLPA 99 (350)
T ss_dssp SEEEECCCG
T ss_pred CEEEECCCc
Confidence 999986554
No 474
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=85.15 E-value=0.77 Score=48.35 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=56.2
Q ss_pred CCCceEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhh-CCCCCc
Q 019187 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (345)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~~y 201 (345)
....+||+.| +|-|..+..++++.+. +|+++..+++ .+..+ ++.-. .++ ....|..+-+.+ .....+
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~k-~~~l~--lga~~-v~~-----~~~~~~~~~i~~~t~g~Gv 413 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASEDK-WQAVE--LSREH-LAS-----SRTCDFEQQFLGATGGRGV 413 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGGG-GGGSC--SCGGG-EEC-----SSSSTHHHHHHHHSCSSCC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChHH-hhhhh--cChhh-eee-----cCChhHHHHHHHHcCCCCe
Confidence 3467999999 5668888899998765 7888775542 11111 21100 000 011233333332 334579
Q ss_pred cEEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 202 DvIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
|+|+-.... +.++...++|+++|.++.-.
T Consensus 414 DvVld~~gg-----------~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 414 DVVLNSLAG-----------EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp SEEEECCCT-----------TTTHHHHTSCTTCEEEEECC
T ss_pred EEEEECCCc-----------HHHHHHHHHhcCCCEEEEec
Confidence 988843221 34578889999999998753
No 475
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.14 E-value=7.4 Score=34.94 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=49.4
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
+.|.+|+-|++. ++++.+++. ....+|..++.+++-++...+.+... ..++..+..|..+. ++..
T Consensus 6 ~gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-----GKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 356677666555 456655443 12468999999988777666655442 35788888887432 2111
Q ss_pred -CCCCccEEEEcCC
Q 019187 197 -PEGTYDAVIVDSS 209 (345)
Q Consensus 197 -~~~~yDvIi~D~~ 209 (345)
.-++.|++|.++-
T Consensus 80 ~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 80 ETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 1367999998764
No 476
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.11 E-value=9.8 Score=33.59 Aligned_cols=76 Identities=14% Similarity=0.080 Sum_probs=48.4
Q ss_pred CCceEEEEeccchHHHHH----HHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------Hhh
Q 019187 126 NPKKVLVIGGGDGGVLRE----VSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKA 195 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~----ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~ 195 (345)
..+.||+.|++.| ++++ +++. ..+|++++.+++-++...+.+.. ...++.++..|..+. ++.
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTD-----TGRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4578888887654 4444 4444 45899999998776665554443 235788888887432 211
Q ss_pred C--CCCCccEEEEcCC
Q 019187 196 V--PEGTYDAVIVDSS 209 (345)
Q Consensus 196 ~--~~~~yDvIi~D~~ 209 (345)
. .-++.|++|.++.
T Consensus 82 ~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 82 TMKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHHTSCCSEEEECCC
T ss_pred HHHHcCCCcEEEECCC
Confidence 1 1357899998763
No 477
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.07 E-value=1.6 Score=39.93 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=52.6
Q ss_pred CCceEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 126 NPKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
...+|.+||+|.=+ ++..+++. .-+|+++|.+++.++.+.+. . ......|..+.+ ...|+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-g----------~~~~~~~~~e~~-----~~aDv 67 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE-G----------ACGAAASAREFA-----GVVDA 67 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-T----------CSEEESSSTTTT-----TTCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc-C----------CccccCCHHHHH-----hcCCE
Confidence 34689999998744 33344544 34899999999887776553 1 011133333322 34699
Q ss_pred EEEcCCCCCCCccccCcHHHH---HHHHhccCCCcEEEEe
Q 019187 204 VIVDSSDPIGPAQELFEKPFF---ESVAKALRPGGVVSTQ 240 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~---~~v~r~LkpgGvlv~~ 240 (345)
||+-.+++.. ..+.+ +.+...|++|.+++.-
T Consensus 68 vi~~vp~~~~------~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 68 LVILVVNAAQ------VRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp EEECCSSHHH------HHHHHC--CCCGGGSCTTCEEEEC
T ss_pred EEEECCCHHH------HHHHHhChhhHHhhCCCCCEEEec
Confidence 9987654210 12233 4455677887766643
No 478
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=85.03 E-value=6.2 Score=34.25 Aligned_cols=79 Identities=13% Similarity=0.162 Sum_probs=46.9
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEech--H------hHHhh
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG--V------AFLKA 195 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~--~------~~l~~ 195 (345)
+.+.||+.|++ |+++++++++ ....+|.+++.++.-++...+.+... ..+++.++..|. . .+++.
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA----GQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc----CCCCceEEEeccccCCHHHHHHHHHH
Confidence 34677877765 5565555443 11358999999987776665554432 234566776665 1 12221
Q ss_pred C--CCCCccEEEEcCC
Q 019187 196 V--PEGTYDAVIVDSS 209 (345)
Q Consensus 196 ~--~~~~yDvIi~D~~ 209 (345)
. .-++.|++|.++.
T Consensus 88 ~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 0257899998765
No 479
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.02 E-value=5.8 Score=35.19 Aligned_cols=78 Identities=13% Similarity=0.127 Sum_probs=49.4
Q ss_pred CCceEEEEeccc----hH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------Hh
Q 019187 126 NPKKVLVIGGGD----GG-VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LK 194 (345)
Q Consensus 126 ~~~~VL~IG~G~----G~-~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~ 194 (345)
+.|.+|+-|+++ |. +++.+++. ..+|..++.+++..+.+.+.+... ..+++..+..|..+. ++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQL----NQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGG----TCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhc----CCCcEEEEEccCCCHHHHHHHHH
Confidence 467899998543 32 34445555 468999999987766666555443 345788888886432 21
Q ss_pred hC--CCCCccEEEEcCC
Q 019187 195 AV--PEGTYDAVIVDSS 209 (345)
Q Consensus 195 ~~--~~~~yDvIi~D~~ 209 (345)
.. .-++.|+++.+..
T Consensus 79 ~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHCCCSEEEECCC
T ss_pred HHHHHhCCCCEEEeccc
Confidence 11 1367999998754
No 480
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=85.01 E-value=7.5 Score=35.63 Aligned_cols=108 Identities=8% Similarity=0.035 Sum_probs=63.4
Q ss_pred CceEEEEeccchH--HHHHHHhcCCCcEEEEEECC--HHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEID--KMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~ll~~~~~~~V~~VEid--~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
..+|.+||+|.-+ +++.+++. +..+|+++|.+ ++..+.+++. .++ ...+..+.+++ .|
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~~~~~~~~~~~~~-----------g~~-~~~~~~e~~~~-----aD 85 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAASAESWRPRAEEL-----------GVS-CKASVAEVAGE-----CD 85 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSSCHHHHHHHHHHT-----------TCE-ECSCHHHHHHH-----CS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCCCCHHHHHHHHHC-----------CCE-EeCCHHHHHhc-----CC
Confidence 4689999998644 34445555 23489999996 5666665542 111 12344444443 49
Q ss_pred EEEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEeccchhhhhhHHHHHHHHHHhhc
Q 019187 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIF 262 (345)
Q Consensus 203 vIi~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~~s~~~~~~~~~~i~~~l~~~F 262 (345)
+||+-.+.+. ..+.++.+...|+++.+++-.+... +.....+.+.+.+.+
T Consensus 86 vVi~~vp~~~-------~~~~~~~l~~~l~~~~ivvd~st~~---~~~~~~~~~~~~~~~ 135 (312)
T 3qsg_A 86 VIFSLVTAQA-------ALEVAQQAGPHLCEGALYADFTSCS---PAVKRAIGDVISRHR 135 (312)
T ss_dssp EEEECSCTTT-------HHHHHHHHGGGCCTTCEEEECCCCC---HHHHHHHHHHHHHHC
T ss_pred EEEEecCchh-------HHHHHHhhHhhcCCCCEEEEcCCCC---HHHHHHHHHHHHhhc
Confidence 9998765532 2356788888999887776543222 223334444454443
No 481
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=84.96 E-value=4 Score=34.78 Aligned_cols=67 Identities=18% Similarity=0.090 Sum_probs=43.8
Q ss_pred eEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHh---HHhhCCCCCccE
Q 019187 129 KVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA---FLKAVPEGTYDA 203 (345)
Q Consensus 129 ~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~---~l~~~~~~~yDv 203 (345)
+||+.|+ +|.+++++++. ....+|++++.++.- ... .++++++.+|..+ .+... -+..|+
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~~------~~~~~~~~~D~~d~~~~~~~~-~~~~d~ 66 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDYQIYAGARKVEQ-------VPQ------YNNVKAVHFDVDWTPEEMAKQ-LHGMDA 66 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSCEEEEEESSGGG-------SCC------CTTEEEEECCTTSCHHHHHTT-TTTCSE
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCccc-------hhh------cCCceEEEecccCCHHHHHHH-HcCCCE
Confidence 6888874 46677776553 123689999987631 111 1579999999866 34433 356999
Q ss_pred EEEcCCC
Q 019187 204 VIVDSSD 210 (345)
Q Consensus 204 Ii~D~~~ 210 (345)
||..+..
T Consensus 67 vi~~ag~ 73 (219)
T 3dqp_A 67 IINVSGS 73 (219)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9986653
No 482
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=84.93 E-value=4.9 Score=37.21 Aligned_cols=69 Identities=22% Similarity=0.216 Sum_probs=42.4
Q ss_pred ceEEEEeccchHH--HHHHHhcCCCcEEE-EEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEE
Q 019187 128 KKVLVIGGGDGGV--LREVSRHSSVEKID-ICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (345)
Q Consensus 128 ~~VL~IG~G~G~~--~~~ll~~~~~~~V~-~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvI 204 (345)
.||.+||+|.-+. +..+.+.+. .+++ ++|.+++..+.+.+.+. +.-...|..+.+. +...|+|
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~-~~l~av~d~~~~~~~~~~~~~~----------~~~~~~~~~~ll~---~~~~D~V 68 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDD-AILYAISDVREDRLREMKEKLG----------VEKAYKDPHELIE---DPNVDAV 68 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTT-EEEEEEECSCHHHHHHHHHHHT----------CSEEESSHHHHHH---CTTCCEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCC-cEEEEEECCCHHHHHHHHHHhC----------CCceeCCHHHHhc---CCCCCEE
Confidence 4899999986332 333444444 4555 67999887665444332 1123567777765 3468999
Q ss_pred EEcCCC
Q 019187 205 IVDSSD 210 (345)
Q Consensus 205 i~D~~~ 210 (345)
++-.+.
T Consensus 69 ~i~tp~ 74 (344)
T 3ezy_A 69 LVCSST 74 (344)
T ss_dssp EECSCG
T ss_pred EEcCCC
Confidence 976654
No 483
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.92 E-value=3.7 Score=37.39 Aligned_cols=79 Identities=16% Similarity=0.170 Sum_probs=47.8
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..++||+.|++ |++++.+++. ....+|++++.+++-.+...+.+... ...++.++..|..+. ++..
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----GAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS----SSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----CCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 35677777765 4455554442 11358999999987665555544432 225788888887542 1111
Q ss_pred -CCCCccEEEEcCC
Q 019187 197 -PEGTYDAVIVDSS 209 (345)
Q Consensus 197 -~~~~yDvIi~D~~ 209 (345)
.-++.|++|.++.
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1257899998764
No 484
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=84.86 E-value=13 Score=34.39 Aligned_cols=105 Identities=24% Similarity=0.339 Sum_probs=52.4
Q ss_pred CCceEEEEe-ccc-hHHHHH-HHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEe--chHhHHhhCCCCC
Q 019187 126 NPKKVLVIG-GGD-GGVLRE-VSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG--DGVAFLKAVPEGT 200 (345)
Q Consensus 126 ~~~~VL~IG-~G~-G~~~~~-ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~--D~~~~l~~~~~~~ 200 (345)
++.+|+++| +|. |..... ++......+|.++|+++. ...+.+ +... . ...++..+.+ |..+.++ .
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~d-L~~~--~-~~~~v~~~~~t~d~~~al~-----g 76 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTAD-ISHM--D-TGAVVRGFLGQQQLEAALT-----G 76 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHH-HHTS--C-SSCEEEEEESHHHHHHHHT-----T
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHH-hhcc--c-ccceEEEEeCCCCHHHHcC-----C
Confidence 456899999 565 555444 334433467999999986 222211 1110 0 1123444323 3233333 3
Q ss_pred ccEEEEcCCCCCCCcc---ccC------cHHHHHHHHhccCCCcEEEEec
Q 019187 201 YDAVIVDSSDPIGPAQ---ELF------EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 201 yDvIi~D~~~p~~~~~---~l~------t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.|+||+-...|..+.. .++ ..+..+.+.+ ..|++++++.+
T Consensus 77 aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~-~~p~~~viv~S 125 (326)
T 1smk_A 77 MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK-CCPRAIVNLIS 125 (326)
T ss_dssp CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHH-HCTTSEEEECC
T ss_pred CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEEC
Confidence 6999986654433221 111 1233333333 34788887744
No 485
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.81 E-value=5.9 Score=34.97 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=49.0
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..++||+.|++ |+++++++++ ....+|.+++.+++-.+...+.+... ..++.++..|..+. +...
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 34678877765 4566655443 12457999999987776665555432 35788888887432 1111
Q ss_pred -CCCCccEEEEcCCC
Q 019187 197 -PEGTYDAVIVDSSD 210 (345)
Q Consensus 197 -~~~~yDvIi~D~~~ 210 (345)
.-++.|++|..+..
T Consensus 102 ~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 02578999987653
No 486
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=84.77 E-value=3.4 Score=38.80 Aligned_cols=45 Identities=13% Similarity=0.256 Sum_probs=34.9
Q ss_pred CCceEEEEeccchHHHHHHHhcCCCcEEEEEECC-HHHHHHHHhcccc
Q 019187 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEID-KMVVDVSKQFFPD 172 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~~~~~~V~~VEid-~~vi~~ar~~~~~ 172 (345)
..+.|+.||||-......+....+ .++.+|+| |++++.-++.++.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~--~~~~~EvD~P~vi~~K~~~l~~ 142 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFP--HLAYVDIDYNESVELKNSILRE 142 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCT--TEEEEEEECHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCccHHHHhcCcCC--CCEEEECCCHHHHHHHHHHhhh
Confidence 357899999999998888876422 46777888 8998888777654
No 487
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.59 E-value=0.64 Score=43.47 Aligned_cols=95 Identities=9% Similarity=0.029 Sum_probs=55.9
Q ss_pred ceEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhC-CCCCccEE
Q 019187 128 KKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYDAV 204 (345)
Q Consensus 128 ~~VL~IG~--G~G~~~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~~yDvI 204 (345)
++||+.|+ |-|..+..+++..+. +|++++.+++-.+.+++.-. +.-+.....|..+.+.+. ....+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGA-------AHVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTC-------SEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC-------CEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 46666532 335556667776554 89999999888888876421 100111112333333322 12469988
Q ss_pred EEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEEec
Q 019187 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 205 i~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+-... .+.++.+.++|+++|.++.-.
T Consensus 238 id~~g-----------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 238 LDAVT-----------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EESSC-----------HHHHHHHHHHSCTTCEEEECC
T ss_pred EECCC-----------ChhHHHHHhhhcCCCEEEEEe
Confidence 84322 134577889999999998754
No 488
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=84.53 E-value=2.5 Score=39.99 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=23.3
Q ss_pred CceEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 019187 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK 160 (345)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~ll~~~~~~~V~~VEid~ 160 (345)
..+||+||+|+ |......+...++.+++.+|-|.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 56999999875 33333323334688999999884
No 489
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=84.48 E-value=8.2 Score=37.95 Aligned_cols=96 Identities=10% Similarity=0.090 Sum_probs=60.6
Q ss_pred CCceEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccE
Q 019187 126 NPKKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~--~~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDv 203 (345)
..++|.+||+|.-+. ++.+++. .-+|++++.+++.++...+..+ +..+. ...|..+.+... ++.|+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~-------~~gi~-~~~s~~e~v~~l--~~aDv 81 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENP-------GKKLV-PYYTVKEFVESL--ETPRR 81 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHST-------TSCEE-ECSSHHHHHHTB--CSSCE
T ss_pred CCCeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCC-------CCCeE-EeCCHHHHHhCC--CCCCE
Confidence 456899999997443 3445554 2479999999988776655332 11232 234555665532 34799
Q ss_pred EEEcCCCCCCCccccCcHHHHHHHHhccCCCcEEEE
Q 019187 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 204 Ii~D~~~p~~~~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
||+-.+.+. ...+.++.+...|++|.+++-
T Consensus 82 Vil~Vp~~~------~v~~vl~~l~~~l~~g~iIId 111 (480)
T 2zyd_A 82 ILLMVKAGA------GTDAAIDSLKPYLDKGDIIID 111 (480)
T ss_dssp EEECSCSSS------HHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEECCCHH------HHHHHHHHHHhhcCCCCEEEE
Confidence 997765421 135677888888988776663
No 490
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.46 E-value=11 Score=34.83 Aligned_cols=103 Identities=23% Similarity=0.264 Sum_probs=54.9
Q ss_pred eEEEEeccchHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEE
Q 019187 129 KVLVIGGGDGGVL--REVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (345)
Q Consensus 129 ~VL~IG~G~G~~~--~~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~ 206 (345)
+|.+||+|.-+.+ ..+++.....+|+++|++++.++.....+..... +. ...++...|. +-+ ...|+||+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~-~~~~i~~~d~-~~~-----~~aDvVii 73 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT-RRANIYAGDY-ADL-----KGSDVVIV 73 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS-CCCEEEECCG-GGG-----TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc-CCcEEEeCCH-HHh-----CCCCEEEE
Confidence 6899999874433 3344443234899999998766654322211000 01 1234444452 222 34699998
Q ss_pred cCCCCCCCcc---ccC------cHHHHHHHHhccCCCcEEEEe
Q 019187 207 DSSDPIGPAQ---ELF------EKPFFESVAKALRPGGVVSTQ 240 (345)
Q Consensus 207 D~~~p~~~~~---~l~------t~ef~~~v~r~LkpgGvlv~~ 240 (345)
-...+..+.. .+. -.+..+.+.+. .|++++++-
T Consensus 74 av~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~ 115 (319)
T 1a5z_A 74 AAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVV 115 (319)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe
Confidence 7765543211 111 13555556555 588887663
No 491
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=84.44 E-value=7.5 Score=35.99 Aligned_cols=73 Identities=12% Similarity=0.085 Sum_probs=46.0
Q ss_pred CCceEEEEeccc--hH-HHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCc
Q 019187 126 NPKKVLVIGGGD--GG-VLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (345)
Q Consensus 126 ~~~~VL~IG~G~--G~-~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~y 201 (345)
++-||.+||||. |. .+..+.+. +...-+-++|.+++-.+.+.+.++. .-...|..+.+. +...
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~----------~~~~~~~~~ll~---~~~v 83 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN----------PAVFDSYEELLE---SGLV 83 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS----------CEEESCHHHHHH---SSCC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCC----------CcccCCHHHHhc---CCCC
Confidence 467999999993 33 34445555 4443446789998876654443321 124577777776 3568
Q ss_pred cEEEEcCCCC
Q 019187 202 DAVIVDSSDP 211 (345)
Q Consensus 202 DvIi~D~~~p 211 (345)
|+|++-.+..
T Consensus 84 D~V~i~tp~~ 93 (340)
T 1zh8_A 84 DAVDLTLPVE 93 (340)
T ss_dssp SEEEECCCGG
T ss_pred CEEEEeCCch
Confidence 9999876543
No 492
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=84.30 E-value=18 Score=33.67 Aligned_cols=108 Identities=18% Similarity=0.258 Sum_probs=55.6
Q ss_pred CCCceEEEEeccc-hHHHH-HHHhcCCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 125 PNPKKVLVIGGGD-GGVLR-EVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~-~ll~~~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
..+.+|.+||+|. |.... .++...-..+++.+|++++.++--..-+.... .+. ..+++..+|... + ...|
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~-~~~~i~~~~~~a-~-----~~aD 78 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT-SPKKIYSAEYSD-A-----KDAD 78 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGG-G-----TTCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc-CCcEEEECcHHH-h-----cCCC
Confidence 4567999999865 33222 23444334689999999876553222122110 011 356666555322 2 3369
Q ss_pred EEEEcCCCCCCC---ccccCc------HHHHHHHHhccCCCcEEEEec
Q 019187 203 AVIVDSSDPIGP---AQELFE------KPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 203 vIi~D~~~p~~~---~~~l~t------~ef~~~v~r~LkpgGvlv~~~ 241 (345)
+||+-...|..+ ...|+. .++.+.+.+ ..|++++++-+
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvt 125 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAA 125 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEECS
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEcc
Confidence 999865544332 122331 234444444 46899887754
No 493
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=84.28 E-value=13 Score=32.97 Aligned_cols=110 Identities=15% Similarity=0.121 Sum_probs=59.1
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECC-HHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEID-KMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid-~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~ 196 (345)
..+.||+.|++. +++++++++ ....+|.+++.. +...+...+.+.. ...++.++..|..+. ++..
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA-----LGSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 356788777654 455555443 113578887754 4444444333332 135788888887432 2211
Q ss_pred --CCCCccEEEEcCCCCC-CCccccC--------------cHHHHHHHHhccCCCcEEEEec
Q 019187 197 --PEGTYDAVIVDSSDPI-GPAQELF--------------EKPFFESVAKALRPGGVVSTQA 241 (345)
Q Consensus 197 --~~~~yDvIi~D~~~p~-~~~~~l~--------------t~ef~~~v~r~LkpgGvlv~~~ 241 (345)
.-++.|++|.++.-.. .+...+- ...+.+.+...|+++|.++..+
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 0257899997654321 1111110 1124456667788888877654
No 494
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=84.26 E-value=10 Score=33.75 Aligned_cols=72 Identities=18% Similarity=0.281 Sum_probs=45.0
Q ss_pred ceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC--C
Q 019187 128 KKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV--P 197 (345)
Q Consensus 128 ~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~--~ 197 (345)
|+||+-|++.| +++.+++. ....+|.++|++++..+...+. .+++..+..|..+. ++.. .
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---------RPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------cCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 57887776654 55555443 1246899999998766654442 24677777886432 2111 1
Q ss_pred CCCccEEEEcCC
Q 019187 198 EGTYDAVIVDSS 209 (345)
Q Consensus 198 ~~~yDvIi~D~~ 209 (345)
-++.|++|.++.
T Consensus 73 ~g~iDiLVNNAG 84 (247)
T 3ged_A 73 LQRIDVLVNNAC 84 (247)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 267999998764
No 495
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=84.26 E-value=13 Score=32.68 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=46.2
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..++||+.|++ |+++++++++ ....+|.+++.+++-.+...+.+. .++.++..|..+. ++..
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--------PAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CCceEEEeeCCCHHHHHHHHHHHH
Confidence 45678888765 4555554442 114589999999876665544332 3577888886432 2111
Q ss_pred -CCCCccEEEEcCCC
Q 019187 197 -PEGTYDAVIVDSSD 210 (345)
Q Consensus 197 -~~~~yDvIi~D~~~ 210 (345)
.-++.|++|.++.-
T Consensus 78 ~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 78 EHAGGLDILVNNAAL 92 (259)
T ss_dssp HHSSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 12579999987653
No 496
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.25 E-value=5.3 Score=35.82 Aligned_cols=79 Identities=14% Similarity=0.173 Sum_probs=47.6
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..++||+.|++. +++++++++ ....+|++++.+++-.+...+.+... ..++.++..|..+. ++..
T Consensus 31 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGAST-GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-----GGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 456788887664 455554442 11458999999977665555444331 34678888887432 2211
Q ss_pred -CCCCccEEEEcCCC
Q 019187 197 -PEGTYDAVIVDSSD 210 (345)
Q Consensus 197 -~~~~yDvIi~D~~~ 210 (345)
.-++.|++|.++..
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 105 GELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 02478999987643
No 497
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.23 E-value=8.6 Score=33.98 Aligned_cols=80 Identities=14% Similarity=0.214 Sum_probs=47.9
Q ss_pred CCceEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhH------HhhC-
Q 019187 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (345)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~ll~~--~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~------l~~~- 196 (345)
..+.||+.|++. +++++++++ ....+|++++.+++-++.+.+.+... ....++.++..|..+. ++..
T Consensus 7 ~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 7 SEAVAVVTGGSS-GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR---FPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---STTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---cCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 356788777654 455554442 11458999999987766555544321 1234688888887432 2111
Q ss_pred -CCCCccEEEEcCC
Q 019187 197 -PEGTYDAVIVDSS 209 (345)
Q Consensus 197 -~~~~yDvIi~D~~ 209 (345)
.-++.|++|.++.
T Consensus 83 ~~~g~id~lvnnAg 96 (265)
T 3lf2_A 83 RTLGCASILVNNAG 96 (265)
T ss_dssp HHHCSCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0257899998764
No 498
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=84.18 E-value=4.4 Score=31.33 Aligned_cols=79 Identities=9% Similarity=0.037 Sum_probs=52.2
Q ss_pred cEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCCccccCcHHHHHHHHhc
Q 019187 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKA 230 (345)
Q Consensus 151 ~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~~~~l~t~ef~~~v~r~ 230 (345)
.+|..||-|+...+..++.+... +-.+. ...++.+.+.......+|+|++|..-|.+. .-..++++.+++.
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~---~~g~~~~~~l~~~ 77 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPL-----DVTIQ-CFASAESFMRQQISDDAIGMIIEAHLEDKK---DSGIELLETLVKR 77 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTS-----SSEEE-EESSHHHHTTSCCCTTEEEEEEETTGGGBT---THHHHHHHHHHHT
T ss_pred CeEEEEcCCHHHHHHHHHHHHHC-----CcEEE-EeCCHHHHHHHHhccCCCEEEEeCcCCCCC---ccHHHHHHHHHhC
Confidence 47999999999999888887642 11333 566777777665567899999998755310 1124677777765
Q ss_pred cCCCc-EEEE
Q 019187 231 LRPGG-VVST 239 (345)
Q Consensus 231 LkpgG-vlv~ 239 (345)
- ++- ++++
T Consensus 78 ~-~~~~ii~~ 86 (136)
T 3kto_A 78 G-FHLPTIVM 86 (136)
T ss_dssp T-CCCCEEEE
T ss_pred C-CCCCEEEE
Confidence 4 443 4444
No 499
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=84.18 E-value=5.9 Score=36.86 Aligned_cols=71 Identities=18% Similarity=0.285 Sum_probs=44.8
Q ss_pred CCceEEEEeccchH--HHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCcc
Q 019187 126 NPKKVLVIGGGDGG--VLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (345)
Q Consensus 126 ~~~~VL~IG~G~G~--~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yD 202 (345)
+..+|.+||+|.-+ .+..+.+. +...-+-++|.+++-.+.+.+.+. + -...|..+.+.+ ...|
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~----------~-~~~~~~~~ll~~---~~~D 77 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTG----------A-RGHASLTDMLAQ---TDAD 77 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHC----------C-EEESCHHHHHHH---CCCS
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcC----------C-ceeCCHHHHhcC---CCCC
Confidence 45699999999533 34445555 443334478999887665544332 2 245677777763 4589
Q ss_pred EEEEcCCC
Q 019187 203 AVIVDSSD 210 (345)
Q Consensus 203 vIi~D~~~ 210 (345)
+|++-.+.
T Consensus 78 ~V~i~tp~ 85 (354)
T 3q2i_A 78 IVILTTPS 85 (354)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99976554
No 500
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=84.11 E-value=2.6 Score=34.15 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=50.4
Q ss_pred cchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhcccccccCCCCCCEEEEEechHhHHhhCCCCCccEEEEcCCCCCCC
Q 019187 136 GDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGP 214 (345)
Q Consensus 136 G~G~~~~~ll~~-~~~~~V~~VEid~~vi~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~~yDvIi~D~~~p~~~ 214 (345)
|.++......+. ....+|..||-|+...+..++.+... ..-.+-....++.+.+.......+|+||+|..-+...
T Consensus 10 ~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~----~~~~~v~~~~~~~~al~~l~~~~~dlvilD~~l~~~~ 85 (164)
T 3t8y_A 10 HSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQ----PDMKVVGFAKDGLEAVEKAIELKPDVITMDIEMPNLN 85 (164)
T ss_dssp --------------CCEEEEEECSCHHHHHHHHHHHHTS----TTEEEEEEESSHHHHHHHHHHHCCSEEEECSSCSSSC
T ss_pred ccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcC----CCeEEEEecCCHHHHHHHhccCCCCEEEEeCCCCCCC
Confidence 344444444332 12357999999999998888877642 1111222466776665543345699999998765432
Q ss_pred ccccCcHHHHHHHHhccCCCcEEEE
Q 019187 215 AQELFEKPFFESVAKALRPGGVVST 239 (345)
Q Consensus 215 ~~~l~t~ef~~~v~r~LkpgGvlv~ 239 (345)
..++++.+++.- +--++++
T Consensus 86 -----g~~l~~~lr~~~-~~~ii~~ 104 (164)
T 3t8y_A 86 -----GIEALKLIMKKA-PTRVIMV 104 (164)
T ss_dssp -----HHHHHHHHHHHS-CCEEEEE
T ss_pred -----HHHHHHHHHhcC-CceEEEE
Confidence 246777776543 3334444
Done!