Query 019193
Match_columns 344
No_of_seqs 228 out of 2457
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 07:28:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019193.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019193hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 1.4E-51 3E-56 367.5 32.9 322 5-343 5-335 (336)
2 PRK10162 acetyl esterase; Prov 100.0 5.1E-41 1.1E-45 304.3 27.3 255 63-344 55-316 (318)
3 COG0657 Aes Esterase/lipase [L 100.0 3.6E-39 7.7E-44 292.5 27.7 248 73-343 61-310 (312)
4 PF07859 Abhydrolase_3: alpha/ 100.0 8.1E-38 1.8E-42 267.9 15.3 205 109-321 1-210 (211)
5 PF10340 DUF2424: Protein of u 99.9 1.3E-22 2.9E-27 181.9 21.7 209 104-321 121-351 (374)
6 KOG4388 Hormone-sensitive lipa 99.9 1.2E-22 2.6E-27 185.6 17.6 109 107-218 397-506 (880)
7 COG1506 DAP2 Dipeptidyl aminop 99.9 6.3E-22 1.4E-26 194.3 19.5 238 62-344 362-617 (620)
8 KOG1455 Lysophospholipase [Lip 99.9 4.1E-20 9E-25 158.7 20.1 231 75-343 39-312 (313)
9 TIGR02821 fghA_ester_D S-formy 99.9 1.6E-19 3.4E-24 160.7 23.1 221 75-344 26-275 (275)
10 PF00326 Peptidase_S9: Prolyl 99.9 1.3E-20 2.9E-25 161.5 14.3 187 128-344 4-210 (213)
11 PLN02298 hydrolase, alpha/beta 99.8 1.3E-18 2.9E-23 159.1 23.9 233 73-344 42-318 (330)
12 PRK10566 esterase; Provisional 99.8 1.2E-18 2.6E-23 152.9 19.9 201 103-344 25-249 (249)
13 PLN02385 hydrolase; alpha/beta 99.8 1.4E-17 3E-22 153.5 25.0 236 76-344 74-346 (349)
14 PRK05077 frsA fermentation/res 99.8 2E-17 4.3E-22 154.9 23.2 236 65-344 168-413 (414)
15 PF01738 DLH: Dienelactone hyd 99.8 3.8E-18 8.2E-23 146.8 16.5 183 103-344 12-218 (218)
16 PLN02442 S-formylglutathione h 99.8 3.4E-17 7.4E-22 146.2 22.7 221 74-343 30-280 (283)
17 KOG4627 Kynurenine formamidase 99.8 3E-19 6.5E-24 144.0 8.2 203 62-319 42-247 (270)
18 PRK10115 protease 2; Provision 99.8 1.2E-17 2.5E-22 165.4 20.6 239 62-342 413-674 (686)
19 COG0412 Dienelactone hydrolase 99.8 6.2E-17 1.3E-21 139.9 21.4 201 68-344 5-234 (236)
20 PLN02652 hydrolase; alpha/beta 99.8 1.2E-16 2.6E-21 148.6 23.8 220 104-344 135-388 (395)
21 PHA02857 monoglyceride lipase; 99.8 3.2E-17 6.9E-22 146.1 19.3 231 74-343 11-273 (276)
22 PRK10749 lysophospholipase L2; 99.8 9.2E-17 2E-21 146.8 21.1 220 107-343 55-329 (330)
23 PRK13604 luxD acyl transferase 99.8 2.4E-17 5.2E-22 145.4 16.4 190 103-321 35-246 (307)
24 COG2267 PldB Lysophospholipase 99.7 2.5E-16 5.3E-21 141.0 21.0 222 104-344 33-295 (298)
25 PRK11460 putative hydrolase; P 99.7 7.7E-17 1.7E-21 139.7 16.8 177 103-344 14-209 (232)
26 PLN00021 chlorophyllase 99.7 4.6E-16 9.9E-21 140.0 22.2 190 74-322 37-243 (313)
27 PF02230 Abhydrolase_2: Phosph 99.7 3E-16 6.6E-21 134.7 15.7 116 175-344 99-216 (216)
28 COG2272 PnbA Carboxylesterase 99.7 9.7E-17 2.1E-21 146.8 10.2 130 72-221 76-218 (491)
29 TIGR01840 esterase_phb esteras 99.7 1.6E-15 3.4E-20 129.8 17.1 172 103-304 11-197 (212)
30 cd00312 Esterase_lipase Estera 99.7 8.9E-17 1.9E-21 155.0 9.3 130 72-221 75-214 (493)
31 KOG2100 Dipeptidyl aminopeptid 99.7 4.2E-15 9.1E-20 147.8 20.0 233 65-343 500-747 (755)
32 COG0400 Predicted esterase [Ge 99.7 1.7E-15 3.7E-20 127.1 14.7 175 103-343 16-205 (207)
33 PF00135 COesterase: Carboxyle 99.7 2.1E-16 4.5E-21 153.9 10.1 130 72-219 105-244 (535)
34 KOG1552 Predicted alpha/beta h 99.7 2.9E-15 6.2E-20 126.5 15.4 184 104-341 59-250 (258)
35 COG1647 Esterase/lipase [Gener 99.7 1.3E-15 2.8E-20 125.0 12.0 212 107-342 16-243 (243)
36 TIGR03100 hydr1_PEP hydrolase, 99.7 1.3E-14 2.8E-19 129.1 19.1 216 107-342 27-274 (274)
37 PRK00870 haloalkane dehalogena 99.7 2.9E-14 6.2E-19 128.8 21.7 124 65-219 21-149 (302)
38 PF12695 Abhydrolase_5: Alpha/ 99.6 1.8E-14 3.8E-19 115.3 15.7 145 108-319 1-145 (145)
39 TIGR03101 hydr2_PEP hydrolase, 99.6 8.6E-14 1.9E-18 122.1 20.8 222 104-340 24-265 (266)
40 PLN02824 hydrolase, alpha/beta 99.6 2.1E-13 4.5E-18 122.7 22.1 215 107-343 30-294 (294)
41 PRK10673 acyl-CoA esterase; Pr 99.6 6.1E-14 1.3E-18 123.2 17.6 213 103-343 14-255 (255)
42 TIGR03611 RutD pyrimidine util 99.6 1.7E-13 3.8E-18 119.8 18.9 215 104-342 12-257 (257)
43 TIGR03695 menH_SHCHC 2-succiny 99.6 1.3E-13 2.8E-18 119.4 16.7 211 107-341 2-251 (251)
44 PRK10985 putative hydrolase; P 99.6 1.3E-13 2.7E-18 125.8 17.2 107 104-222 57-170 (324)
45 TIGR01607 PST-A Plasmodium sub 99.6 9E-14 1.9E-18 127.0 15.4 203 128-341 64-331 (332)
46 TIGR03056 bchO_mg_che_rel puta 99.6 5E-13 1.1E-17 118.7 19.3 211 107-341 29-278 (278)
47 KOG4391 Predicted alpha/beta h 99.6 1.9E-13 4.1E-18 111.7 14.8 223 61-342 50-281 (300)
48 PLN02894 hydrolase, alpha/beta 99.6 6.3E-13 1.4E-17 124.5 20.5 99 104-220 104-211 (402)
49 PF05448 AXE1: Acetyl xylan es 99.5 2.4E-14 5.3E-19 129.0 10.1 236 60-343 51-320 (320)
50 PLN02511 hydrolase 99.5 4.2E-13 9.2E-18 125.1 18.7 130 67-221 75-211 (388)
51 TIGR01836 PHA_synth_III_C poly 99.5 1.9E-12 4.2E-17 119.3 22.3 130 64-223 37-174 (350)
52 TIGR03343 biphenyl_bphD 2-hydr 99.5 8.8E-13 1.9E-17 117.6 19.3 211 107-341 31-281 (282)
53 PF12740 Chlorophyllase2: Chlo 99.5 8.6E-13 1.9E-17 113.4 18.1 187 77-321 5-207 (259)
54 PLN02965 Probable pheophorbida 99.5 1.8E-12 3.9E-17 114.1 20.8 214 107-341 4-251 (255)
55 KOG2281 Dipeptidyl aminopeptid 99.5 6.5E-13 1.4E-17 123.9 18.0 229 71-343 621-867 (867)
56 COG2945 Predicted hydrolase of 99.5 1.3E-12 2.8E-17 105.2 17.0 176 103-343 26-208 (210)
57 TIGR02240 PHA_depoly_arom poly 99.5 7.1E-13 1.5E-17 118.1 17.0 212 107-342 26-265 (276)
58 PLN02679 hydrolase, alpha/beta 99.5 1.9E-12 4E-17 119.8 18.7 216 107-342 89-356 (360)
59 PRK03592 haloalkane dehalogena 99.5 1.3E-12 2.9E-17 117.5 16.9 98 107-220 28-128 (295)
60 TIGR01250 pro_imino_pep_2 prol 99.5 3.7E-12 8E-17 113.1 19.4 101 107-221 26-132 (288)
61 TIGR02427 protocat_pcaD 3-oxoa 99.5 1.5E-12 3.2E-17 113.0 16.1 100 104-220 12-114 (251)
62 PRK03204 haloalkane dehalogena 99.5 1.8E-12 3.9E-17 116.2 16.4 98 107-220 35-136 (286)
63 PRK11071 esterase YqiA; Provis 99.5 1.6E-12 3.5E-17 109.1 15.0 178 107-341 2-189 (190)
64 TIGR01738 bioH putative pimelo 99.5 2.6E-12 5.6E-17 111.2 16.1 96 107-220 5-100 (245)
65 PRK14875 acetoin dehydrogenase 99.4 7.2E-12 1.6E-16 116.4 18.9 209 104-343 130-371 (371)
66 COG3458 Acetyl esterase (deace 99.4 2.4E-12 5.2E-17 108.9 13.3 234 60-342 51-316 (321)
67 PLN03087 BODYGUARD 1 domain co 99.4 9.8E-12 2.1E-16 117.6 18.8 102 104-220 200-309 (481)
68 PRK11126 2-succinyl-6-hydroxy- 99.4 1.1E-11 2.4E-16 108.0 17.7 101 107-221 3-103 (242)
69 PF06500 DUF1100: Alpha/beta h 99.4 1.5E-12 3.3E-17 118.6 12.4 234 63-344 165-410 (411)
70 PF12697 Abhydrolase_6: Alpha/ 99.4 7.4E-13 1.6E-17 112.9 8.7 97 109-221 1-102 (228)
71 PRK06489 hypothetical protein; 99.4 8.5E-12 1.8E-16 115.5 15.9 99 107-219 70-188 (360)
72 PF10503 Esterase_phd: Esteras 99.4 1.2E-11 2.6E-16 105.0 15.2 120 76-220 1-132 (220)
73 PLN02211 methyl indole-3-aceta 99.4 2.3E-10 5E-15 101.8 22.9 101 104-220 17-122 (273)
74 KOG4409 Predicted hydrolase/ac 99.4 1.1E-11 2.4E-16 109.0 13.6 105 107-222 91-197 (365)
75 PRK10349 carboxylesterase BioH 99.4 5.2E-11 1.1E-15 104.8 18.0 212 107-342 14-255 (256)
76 PF07224 Chlorophyllase: Chlor 99.4 4.4E-11 9.5E-16 101.0 16.3 122 75-222 32-159 (307)
77 KOG4178 Soluble epoxide hydrol 99.4 2.3E-10 5.1E-15 100.4 21.4 95 104-218 43-146 (322)
78 COG0429 Predicted hydrolase of 99.4 3.7E-11 8E-16 105.3 16.2 125 67-219 53-185 (345)
79 KOG2112 Lysophospholipase [Lip 99.3 2.3E-11 5E-16 99.8 13.4 177 107-342 4-203 (206)
80 PLN03084 alpha/beta hydrolase 99.3 7.7E-11 1.7E-15 109.2 18.4 101 104-221 126-233 (383)
81 TIGR01249 pro_imino_pep_1 prol 99.3 6.9E-11 1.5E-15 107.0 17.8 98 107-220 28-130 (306)
82 KOG1838 Alpha/beta hydrolase [ 99.3 3.2E-10 6.8E-15 102.9 20.6 134 66-220 96-236 (409)
83 COG4099 Predicted peptidase [G 99.3 1.3E-11 2.9E-16 105.6 10.5 197 74-342 172-384 (387)
84 TIGR00976 /NonD putative hydro 99.3 1.1E-10 2.4E-15 113.9 18.4 124 73-223 6-135 (550)
85 PLN02578 hydrolase 99.3 2.4E-10 5.1E-15 105.6 19.6 96 107-219 87-186 (354)
86 KOG1516 Carboxylesterase and r 99.3 6.6E-12 1.4E-16 122.7 9.2 114 72-202 93-215 (545)
87 PRK10439 enterobactin/ferric e 99.3 2.7E-10 5.8E-15 106.4 19.3 206 75-342 193-408 (411)
88 PRK07581 hypothetical protein; 99.3 4.6E-11 9.9E-16 109.7 14.0 99 107-220 42-159 (339)
89 PF08840 BAAT_C: BAAT / Acyl-C 99.3 9.8E-12 2.1E-16 106.1 8.5 175 159-344 3-211 (213)
90 PLN02980 2-oxoglutarate decarb 99.3 2.5E-10 5.4E-15 123.2 19.2 99 104-219 1370-1479(1655)
91 PLN02872 triacylglycerol lipas 99.3 1.7E-10 3.6E-15 107.2 15.0 108 104-221 73-198 (395)
92 PRK08775 homoserine O-acetyltr 99.2 2.3E-10 5E-15 105.3 14.8 85 127-221 85-174 (343)
93 COG3571 Predicted hydrolase of 99.2 3.5E-09 7.5E-14 82.9 18.8 180 107-342 15-210 (213)
94 PF05728 UPF0227: Uncharacteri 99.2 5.6E-10 1.2E-14 92.6 15.3 183 109-341 2-187 (187)
95 TIGR01392 homoserO_Ac_trn homo 99.2 2.6E-10 5.6E-15 105.3 14.4 102 107-221 32-163 (351)
96 COG3509 LpqC Poly(3-hydroxybut 99.2 1.3E-09 2.8E-14 94.1 17.1 122 74-220 45-179 (312)
97 KOG3101 Esterase D [General fu 99.2 1.2E-10 2.6E-15 95.0 9.6 208 76-323 28-265 (283)
98 KOG4389 Acetylcholinesterase/B 99.2 5.6E-11 1.2E-15 108.2 7.7 105 74-197 119-233 (601)
99 KOG2564 Predicted acetyltransf 99.2 2.4E-10 5.3E-15 97.3 11.1 121 66-217 51-179 (343)
100 KOG1454 Predicted hydrolase/ac 99.2 6.6E-10 1.4E-14 100.8 14.5 218 104-343 57-324 (326)
101 PRK00175 metX homoserine O-ace 99.2 1.8E-09 4E-14 100.6 17.6 62 278-343 310-374 (379)
102 PRK05371 x-prolyl-dipeptidyl a 99.2 6.3E-10 1.4E-14 111.5 15.0 206 129-344 270-520 (767)
103 KOG3043 Predicted hydrolase re 99.1 8.9E-10 1.9E-14 91.1 12.7 160 127-344 56-241 (242)
104 PF12715 Abhydrolase_7: Abhydr 99.1 6.3E-10 1.4E-14 100.0 11.9 133 61-218 84-258 (390)
105 KOG4667 Predicted esterase [Li 99.1 2.1E-09 4.6E-14 88.2 13.4 188 107-323 34-243 (269)
106 cd00707 Pancreat_lipase_like P 99.1 1.4E-09 3E-14 96.6 13.4 107 104-221 35-148 (275)
107 COG1505 Serine proteases of th 99.1 8.6E-10 1.9E-14 103.2 12.0 236 67-344 398-647 (648)
108 PF02129 Peptidase_S15: X-Pro 99.1 6.7E-10 1.5E-14 98.8 10.3 125 74-224 3-140 (272)
109 TIGR01838 PHA_synth_I poly(R)- 99.1 3.1E-08 6.6E-13 95.0 21.8 125 74-224 172-306 (532)
110 KOG2382 Predicted alpha/beta h 99.1 6.7E-09 1.4E-13 91.4 15.5 220 103-343 50-313 (315)
111 PF03583 LIP: Secretory lipase 99.1 2.8E-09 6E-14 95.3 13.1 208 128-344 16-282 (290)
112 PF00756 Esterase: Putative es 99.0 6.2E-10 1.3E-14 97.7 7.9 208 75-339 7-250 (251)
113 PRK05855 short chain dehydroge 99.0 1.7E-08 3.7E-13 99.4 17.9 80 107-202 26-114 (582)
114 COG3208 GrsT Predicted thioest 99.0 2.6E-08 5.6E-13 84.2 14.4 211 107-341 9-234 (244)
115 COG1770 PtrB Protease II [Amin 98.9 1.2E-08 2.6E-13 96.7 12.8 189 102-320 445-657 (682)
116 PRK07868 acyl-CoA synthetase; 98.9 6.7E-08 1.4E-12 100.8 19.2 122 74-222 47-179 (994)
117 KOG2984 Predicted hydrolase [G 98.9 2.7E-09 5.8E-14 86.7 6.7 209 107-343 43-276 (277)
118 TIGR03230 lipo_lipase lipoprot 98.9 2.1E-08 4.5E-13 93.6 13.2 105 104-219 40-153 (442)
119 KOG3847 Phospholipase A2 (plat 98.9 4.3E-08 9.3E-13 85.0 13.0 185 102-344 115-372 (399)
120 PF03403 PAF-AH_p_II: Platelet 98.9 2.6E-08 5.6E-13 92.2 12.7 184 103-344 98-359 (379)
121 KOG2237 Predicted serine prote 98.9 5E-08 1.1E-12 92.0 14.3 198 102-320 467-684 (712)
122 PRK06765 homoserine O-acetyltr 98.8 1.1E-07 2.4E-12 88.4 15.0 63 277-343 323-388 (389)
123 COG0627 Predicted esterase [Ge 98.8 2.3E-08 5.1E-13 89.5 9.9 146 183-344 153-312 (316)
124 PF08538 DUF1749: Protein of u 98.8 2.7E-08 5.8E-13 87.5 7.8 227 107-341 34-303 (303)
125 COG2382 Fes Enterochelin ester 98.7 2.1E-07 4.7E-12 81.0 13.0 196 74-323 80-284 (299)
126 PF06057 VirJ: Bacterial virul 98.7 2E-07 4.3E-12 76.2 9.8 185 107-342 3-191 (192)
127 PF06821 Ser_hydrolase: Serine 98.6 8.1E-07 1.7E-11 72.9 12.4 150 109-318 1-152 (171)
128 TIGR01839 PHA_synth_II poly(R) 98.6 6.2E-06 1.3E-10 78.8 19.4 130 66-224 192-332 (560)
129 PRK04940 hypothetical protein; 98.6 3E-06 6.5E-11 69.2 14.2 118 183-342 61-179 (180)
130 PF00975 Thioesterase: Thioest 98.5 4.6E-07 1E-11 78.2 9.2 101 108-220 2-104 (229)
131 PF00151 Lipase: Lipase; Inte 98.5 3.2E-07 7E-12 83.2 6.4 111 102-220 68-187 (331)
132 PF10230 DUF2305: Uncharacteri 98.4 4.2E-06 9.1E-11 73.9 13.2 117 107-229 3-131 (266)
133 PF03959 FSH1: Serine hydrolas 98.4 1.2E-06 2.6E-11 74.8 8.7 114 159-321 83-203 (212)
134 COG4188 Predicted dienelactone 98.4 2.3E-06 5.1E-11 76.8 10.5 120 65-202 38-179 (365)
135 COG0596 MhpC Predicted hydrola 98.4 4.5E-05 9.8E-10 65.6 18.6 100 107-220 22-123 (282)
136 TIGR03502 lipase_Pla1_cef extr 98.4 2.5E-06 5.3E-11 84.9 10.7 92 104-203 448-576 (792)
137 PF09752 DUF2048: Uncharacteri 98.3 5.8E-05 1.3E-09 67.7 17.5 101 103-218 90-208 (348)
138 COG2819 Predicted hydrolase of 98.3 0.00017 3.6E-09 62.4 19.6 120 175-341 131-259 (264)
139 KOG2624 Triglyceride lipase-ch 98.3 9.4E-05 2E-09 68.5 18.8 108 103-222 71-201 (403)
140 PF07819 PGAP1: PGAP1-like pro 98.2 1.2E-05 2.5E-10 69.3 10.5 106 107-218 5-121 (225)
141 COG3150 Predicted esterase [Ge 98.2 2E-05 4.3E-10 62.5 10.7 54 277-341 133-187 (191)
142 PF06342 DUF1057: Alpha/beta h 98.1 7.9E-05 1.7E-09 64.7 12.9 99 104-219 34-136 (297)
143 PF07082 DUF1350: Protein of u 98.1 0.00051 1.1E-08 58.7 17.2 180 107-322 17-207 (250)
144 COG2936 Predicted acyl esteras 98.0 2.6E-05 5.6E-10 74.3 9.5 134 63-222 17-161 (563)
145 PF06028 DUF915: Alpha/beta hy 98.0 6E-05 1.3E-09 65.7 10.9 151 160-341 87-253 (255)
146 PF11144 DUF2920: Protein of u 98.0 0.00056 1.2E-08 62.7 16.2 57 160-221 164-220 (403)
147 PF00561 Abhydrolase_1: alpha/ 97.9 3.1E-05 6.7E-10 66.2 7.6 71 140-219 1-78 (230)
148 COG3319 Thioesterase domains o 97.9 0.00011 2.5E-09 63.9 9.8 101 107-221 1-104 (257)
149 PF12146 Hydrolase_4: Putative 97.8 4.1E-05 8.9E-10 54.2 5.6 54 75-152 3-56 (79)
150 PF10142 PhoPQ_related: PhoPQ- 97.8 0.00028 6.1E-09 64.6 12.0 225 76-342 50-319 (367)
151 TIGR01849 PHB_depoly_PhaZ poly 97.8 0.0041 8.9E-08 57.9 19.1 88 128-224 120-212 (406)
152 COG4757 Predicted alpha/beta h 97.8 0.00017 3.7E-09 60.5 8.9 70 126-202 45-125 (281)
153 PF05677 DUF818: Chlamydia CHL 97.8 0.00047 1E-08 61.5 12.1 93 107-202 138-235 (365)
154 COG3545 Predicted esterase of 97.8 0.0021 4.5E-08 51.9 14.7 52 159-220 43-94 (181)
155 PF05990 DUF900: Alpha/beta hy 97.7 0.00037 8E-09 60.3 9.9 106 104-221 17-138 (233)
156 PF05577 Peptidase_S28: Serine 97.6 0.00013 2.9E-09 69.3 7.1 105 107-220 30-148 (434)
157 PF11339 DUF3141: Protein of u 97.6 0.016 3.4E-07 54.7 19.9 108 76-205 52-163 (581)
158 PF02273 Acyl_transf_2: Acyl t 97.5 0.0042 9E-08 52.9 13.9 191 102-320 27-238 (294)
159 COG4814 Uncharacterized protei 97.5 0.0042 9.2E-08 53.0 13.8 103 107-221 47-177 (288)
160 KOG3253 Predicted alpha/beta h 97.5 0.0014 2.9E-08 62.4 12.0 167 107-322 177-348 (784)
161 COG4947 Uncharacterized protei 97.5 0.00021 4.6E-09 57.0 5.3 183 107-321 28-217 (227)
162 KOG2551 Phospholipase/carboxyh 97.4 0.0018 3.9E-08 54.2 10.3 121 162-342 92-219 (230)
163 PF12048 DUF3530: Protein of u 97.3 0.096 2.1E-06 47.4 21.2 196 74-343 71-309 (310)
164 PTZ00472 serine carboxypeptida 97.3 0.0035 7.6E-08 59.9 12.3 65 158-225 150-221 (462)
165 KOG3967 Uncharacterized conser 97.3 0.0056 1.2E-07 50.8 11.3 104 103-215 99-222 (297)
166 COG3243 PhaC Poly(3-hydroxyalk 97.2 0.0086 1.9E-07 55.0 13.2 85 128-221 129-218 (445)
167 PF05057 DUF676: Putative seri 97.2 0.0022 4.7E-08 54.9 8.8 90 107-203 5-99 (217)
168 PF01674 Lipase_2: Lipase (cla 97.2 0.00065 1.4E-08 57.9 5.4 83 109-203 4-96 (219)
169 KOG2931 Differentiation-relate 97.2 0.11 2.3E-06 45.7 18.6 210 104-341 45-304 (326)
170 PF03096 Ndr: Ndr family; Int 97.2 0.012 2.7E-07 51.6 13.1 202 104-341 22-277 (283)
171 KOG3975 Uncharacterized conser 97.0 0.043 9.3E-07 46.9 14.5 106 103-220 27-147 (301)
172 PF05705 DUF829: Eukaryotic pr 97.0 0.024 5.1E-07 49.3 13.4 60 278-340 179-240 (240)
173 PRK10252 entF enterobactin syn 97.0 0.0042 9.1E-08 67.3 10.5 101 107-219 1069-1170(1296)
174 PF11288 DUF3089: Protein of u 96.9 0.0039 8.6E-08 52.3 7.2 60 139-203 45-116 (207)
175 COG4782 Uncharacterized protei 96.8 0.0085 1.8E-07 54.0 8.9 107 104-222 115-236 (377)
176 PLN02733 phosphatidylcholine-s 96.8 0.0037 8.1E-08 59.0 6.9 90 126-223 109-204 (440)
177 PF02450 LCAT: Lecithin:choles 96.4 0.0095 2.1E-07 55.7 7.1 88 127-223 67-163 (389)
178 KOG4840 Predicted hydrolases o 96.3 0.18 3.8E-06 42.5 13.2 107 107-223 37-147 (299)
179 PF00450 Peptidase_S10: Serine 96.3 0.037 8E-07 52.2 10.4 44 178-222 133-183 (415)
180 KOG3724 Negative regulator of 96.2 0.011 2.4E-07 58.1 6.5 60 156-216 153-216 (973)
181 KOG1553 Predicted alpha/beta h 96.2 0.016 3.5E-07 51.7 6.9 77 137-221 266-346 (517)
182 PF01764 Lipase_3: Lipase (cla 96.0 0.022 4.7E-07 44.8 6.3 40 180-220 63-106 (140)
183 PF11187 DUF2974: Protein of u 95.9 0.015 3.2E-07 49.9 5.4 52 163-218 69-121 (224)
184 cd00741 Lipase Lipase. Lipase 95.9 0.029 6.3E-07 45.0 6.7 40 179-219 26-66 (153)
185 PF01083 Cutinase: Cutinase; 95.8 0.042 9E-07 45.5 7.5 84 129-218 26-120 (179)
186 PLN02209 serine carboxypeptida 95.8 0.29 6.3E-06 46.5 14.0 46 178-224 164-216 (437)
187 COG2021 MET2 Homoserine acetyl 95.8 0.06 1.3E-06 48.9 8.7 61 139-205 92-170 (368)
188 COG1075 LipA Predicted acetylt 95.7 0.034 7.4E-07 50.9 7.1 101 108-220 61-164 (336)
189 cd00519 Lipase_3 Lipase (class 95.5 0.041 8.8E-07 47.4 6.6 38 183-220 129-168 (229)
190 COG2939 Carboxypeptidase C (ca 95.2 0.1 2.2E-06 49.3 8.3 66 156-222 173-238 (498)
191 KOG2541 Palmitoyl protein thio 95.1 0.25 5.4E-06 42.9 9.7 101 107-218 25-126 (296)
192 TIGR03712 acc_sec_asp2 accesso 95.0 0.63 1.4E-05 44.0 12.8 102 107-223 290-393 (511)
193 smart00824 PKS_TE Thioesterase 94.9 0.2 4.3E-06 41.7 8.9 85 127-219 15-101 (212)
194 PLN03016 sinapoylglucose-malat 94.7 0.21 4.6E-06 47.4 9.3 46 178-224 162-214 (433)
195 COG1073 Hydrolases of the alph 94.6 0.079 1.7E-06 46.8 5.9 64 278-344 233-298 (299)
196 KOG2183 Prolylcarboxypeptidase 94.2 0.075 1.6E-06 48.8 4.7 74 128-205 100-190 (492)
197 PLN02606 palmitoyl-protein thi 93.9 0.74 1.6E-05 41.0 10.4 103 107-219 28-131 (306)
198 PLN02454 triacylglycerol lipas 93.9 0.16 3.4E-06 47.3 6.5 59 159-221 209-272 (414)
199 KOG1282 Serine carboxypeptidas 92.8 0.9 2E-05 43.1 9.7 62 160-225 149-218 (454)
200 PLN02633 palmitoyl protein thi 92.8 1.3 2.8E-05 39.7 10.0 105 104-219 25-130 (314)
201 PF08386 Abhydrolase_4: TAP-li 92.8 0.54 1.2E-05 34.9 6.7 59 277-341 34-92 (103)
202 PF02089 Palm_thioest: Palmito 91.9 1.2 2.6E-05 39.4 8.7 106 103-219 4-115 (279)
203 PF07519 Tannase: Tannase and 91.7 1.3 2.7E-05 42.7 9.5 118 75-220 16-150 (474)
204 PLN00413 triacylglycerol lipas 91.7 0.32 7E-06 45.9 5.3 37 161-203 269-305 (479)
205 PLN02408 phospholipase A1 91.1 0.42 9E-06 43.9 5.2 23 183-205 201-223 (365)
206 PLN02571 triacylglycerol lipas 90.6 0.73 1.6E-05 43.0 6.4 40 160-203 208-247 (413)
207 COG3946 VirJ Type IV secretory 90.5 0.84 1.8E-05 42.1 6.5 78 108-198 262-342 (456)
208 PLN02934 triacylglycerol lipas 90.5 0.47 1E-05 45.2 5.1 39 159-203 304-342 (515)
209 PLN02517 phosphatidylcholine-s 90.3 0.84 1.8E-05 44.4 6.6 87 127-220 158-263 (642)
210 PLN02162 triacylglycerol lipas 89.9 0.62 1.3E-05 44.0 5.3 21 183-203 279-299 (475)
211 PF08237 PE-PPE: PE-PPE domain 89.6 1.2 2.6E-05 38.2 6.6 62 139-204 2-70 (225)
212 PLN02802 triacylglycerol lipas 89.5 0.94 2E-05 43.2 6.2 23 183-205 331-353 (509)
213 PF03283 PAE: Pectinacetyleste 89.2 1 2.3E-05 41.6 6.3 60 159-222 137-199 (361)
214 PLN02753 triacylglycerol lipas 89.2 0.7 1.5E-05 44.2 5.2 21 183-203 313-333 (531)
215 PLN02719 triacylglycerol lipas 89.0 0.72 1.6E-05 44.0 5.1 44 160-204 277-320 (518)
216 PLN03037 lipase class 3 family 88.7 0.92 2E-05 43.4 5.6 22 183-204 319-340 (525)
217 PLN02324 triacylglycerol lipas 88.4 0.81 1.8E-05 42.7 5.0 40 160-203 197-236 (415)
218 PLN02761 lipase class 3 family 88.3 1.4 3E-05 42.3 6.5 43 160-203 272-315 (527)
219 PLN02310 triacylglycerol lipas 86.9 1.6 3.5E-05 40.7 6.0 22 183-204 210-231 (405)
220 PF00561 Abhydrolase_1: alpha/ 86.6 1 2.2E-05 37.9 4.4 42 278-321 176-217 (230)
221 KOG2182 Hydrolytic enzymes of 86.4 5 0.00011 38.2 8.8 106 104-218 85-205 (514)
222 PF10081 Abhydrolase_9: Alpha/ 86.2 3 6.5E-05 36.7 6.9 102 113-220 41-147 (289)
223 PLN02847 triacylglycerol lipas 85.6 1.5 3.3E-05 42.7 5.2 23 183-205 252-274 (633)
224 PLN02213 sinapoylglucose-malat 85.4 4 8.6E-05 37.1 7.8 61 160-224 32-100 (319)
225 KOG2369 Lecithin:cholesterol a 82.9 2.9 6.2E-05 39.5 5.6 72 127-205 126-205 (473)
226 KOG4569 Predicted lipase [Lipi 82.5 2.8 6.2E-05 38.4 5.5 41 161-207 156-196 (336)
227 PF10605 3HBOH: 3HB-oligomer h 82.5 3.4 7.4E-05 40.2 6.1 64 278-342 556-636 (690)
228 PF07519 Tannase: Tannase and 80.9 2.5 5.5E-05 40.7 4.8 62 279-342 355-426 (474)
229 COG5153 CVT17 Putative lipase 80.9 3.3 7.2E-05 36.4 4.9 23 181-203 275-297 (425)
230 KOG4540 Putative lipase essent 80.9 3.3 7.2E-05 36.4 4.9 23 181-203 275-297 (425)
231 COG3673 Uncharacterized conser 78.7 37 0.00081 30.7 10.7 40 159-203 104-143 (423)
232 PF06850 PHB_depo_C: PHB de-po 74.5 8.6 0.00019 32.0 5.4 65 277-343 134-202 (202)
233 PF09994 DUF2235: Uncharacteri 74.2 6.4 0.00014 35.0 5.1 41 158-203 73-113 (277)
234 PF06259 Abhydrolase_8: Alpha/ 73.9 49 0.0011 27.2 10.6 33 183-218 110-143 (177)
235 COG4287 PqaA PhoPQ-activated p 72.5 12 0.00027 34.3 6.3 39 162-203 217-255 (507)
236 PF12242 Eno-Rase_NADH_b: NAD( 68.4 19 0.00042 25.0 5.1 41 160-203 21-61 (78)
237 KOG1551 Uncharacterized conser 67.5 6.3 0.00014 34.4 3.3 22 183-204 196-217 (371)
238 PF10686 DUF2493: Protein of u 64.6 13 0.00029 25.4 3.9 33 104-144 30-62 (71)
239 PRK10964 ADP-heptose:LPS hepto 59.8 64 0.0014 29.1 8.8 37 107-144 179-215 (322)
240 TIGR02193 heptsyl_trn_I lipopo 59.6 50 0.0011 29.7 8.0 83 104-199 178-272 (319)
241 PF12122 DUF3582: Protein of u 58.9 43 0.00093 24.7 6.0 49 293-342 12-60 (101)
242 COG4425 Predicted membrane pro 58.5 29 0.00063 32.8 6.0 79 109-197 325-412 (588)
243 PF04301 DUF452: Protein of un 56.5 46 0.001 28.3 6.6 19 183-201 58-76 (213)
244 KOG1283 Serine carboxypeptidas 55.2 1.1E+02 0.0023 27.9 8.7 61 160-223 103-169 (414)
245 PF12146 Hydrolase_4: Putative 54.9 27 0.0006 24.3 4.3 60 279-341 18-79 (79)
246 KOG2029 Uncharacterized conser 47.9 47 0.001 32.7 5.8 25 178-203 523-547 (697)
247 PF04083 Abhydro_lipase: Parti 45.6 74 0.0016 21.1 5.0 41 63-114 10-51 (63)
248 KOG1252 Cystathionine beta-syn 45.2 51 0.0011 30.1 5.3 88 107-201 212-322 (362)
249 KOG1532 GTPase XAB1, interacts 45.0 2.3E+02 0.005 25.4 9.3 52 148-199 84-142 (366)
250 PF01075 Glyco_transf_9: Glyco 44.7 89 0.0019 26.7 6.9 85 104-200 104-202 (247)
251 PF06500 DUF1100: Alpha/beta h 44.6 14 0.0003 34.8 1.8 64 278-342 190-254 (411)
252 cd07224 Pat_like Patatin-like 43.0 28 0.0006 30.0 3.4 34 165-203 17-50 (233)
253 KOG4127 Renal dipeptidase [Pos 43.0 96 0.0021 28.6 6.6 78 108-192 268-345 (419)
254 cd03789 GT1_LPS_heptosyltransf 42.8 1.5E+02 0.0032 26.0 8.1 82 107-199 122-216 (279)
255 PF05277 DUF726: Protein of un 42.7 65 0.0014 29.6 5.8 38 183-220 221-260 (345)
256 KOG2521 Uncharacterized conser 39.9 1.2E+02 0.0026 28.0 7.0 61 279-342 227-289 (350)
257 PF14714 KH_dom-like: KH-domai 39.6 78 0.0017 22.2 4.6 35 277-311 38-78 (80)
258 TIGR02690 resist_ArsH arsenica 39.6 65 0.0014 27.5 5.0 57 128-192 82-139 (219)
259 KOG1202 Animal-type fatty acid 39.0 1.7E+02 0.0036 32.0 8.3 94 107-218 2124-2217(2376)
260 KOG4372 Predicted alpha/beta h 38.3 48 0.001 30.9 4.2 16 183-198 151-166 (405)
261 COG0541 Ffh Signal recognition 34.9 4.1E+02 0.0089 25.4 10.6 103 107-215 100-246 (451)
262 cd00382 beta_CA Carbonic anhyd 34.4 85 0.0019 23.8 4.5 32 159-196 42-73 (119)
263 PLN02748 tRNA dimethylallyltra 32.5 2.8E+02 0.006 26.8 8.4 33 107-146 22-54 (468)
264 cd07212 Pat_PNPLA9 Patatin-lik 32.3 33 0.00071 31.1 2.2 17 185-201 35-51 (312)
265 cd07207 Pat_ExoU_VipD_like Exo 31.2 33 0.00072 28.2 1.9 19 184-202 29-47 (194)
266 PRK10279 hypothetical protein; 30.9 61 0.0013 29.2 3.7 19 184-202 35-53 (300)
267 KOG2872 Uroporphyrinogen decar 30.6 58 0.0013 28.9 3.3 35 103-151 250-284 (359)
268 cd07225 Pat_PNPLA6_PNPLA7 Pata 29.5 64 0.0014 29.1 3.6 31 165-202 33-63 (306)
269 PF13478 XdhC_C: XdhC Rossmann 29.1 90 0.0019 24.4 3.9 20 129-148 11-30 (136)
270 cd07211 Pat_PNPLA8 Patatin-lik 28.9 40 0.00087 30.3 2.2 17 185-201 44-60 (308)
271 cd00883 beta_CA_cladeA Carboni 28.4 1.1E+02 0.0024 25.2 4.5 34 160-199 65-98 (182)
272 cd07218 Pat_iPLA2 Calcium-inde 28.2 70 0.0015 27.8 3.5 17 186-202 34-50 (245)
273 COG0431 Predicted flavoprotein 28.0 1E+02 0.0023 25.3 4.3 65 127-203 58-122 (184)
274 COG3340 PepE Peptidase E [Amin 27.9 34 0.00074 29.0 1.4 42 107-151 33-74 (224)
275 cd07198 Patatin Patatin-like p 27.7 65 0.0014 26.0 3.1 32 165-203 16-47 (172)
276 TIGR03100 hydr1_PEP hydrolase, 27.7 2.2E+02 0.0049 24.8 6.7 38 278-315 27-67 (274)
277 COG0859 RfaF ADP-heptose:LPS h 27.5 3E+02 0.0066 25.0 7.7 80 107-200 176-270 (334)
278 cd07230 Pat_TGL4-5_like Triacy 27.3 75 0.0016 30.2 3.8 19 185-203 104-122 (421)
279 PF08357 SEFIR: SEFIR domain; 27.3 80 0.0017 24.7 3.4 38 278-315 1-40 (150)
280 cd07216 Pat17_PNPLA8_PNPLA9_li 27.2 37 0.0008 30.6 1.6 17 185-201 45-61 (309)
281 TIGR01250 pro_imino_pep_2 prol 26.9 1.9E+02 0.0041 24.5 6.2 42 277-318 25-66 (288)
282 COG0324 MiaA tRNA delta(2)-iso 26.5 2.9E+02 0.0063 25.0 7.1 47 128-174 17-93 (308)
283 cd07228 Pat_NTE_like_bacteria 26.2 50 0.0011 26.8 2.1 20 184-203 30-49 (175)
284 PRK10907 intramembrane serine 26.2 2.5E+02 0.0055 24.9 6.6 47 293-342 12-58 (276)
285 PRK15000 peroxidase; Provision 26.1 3.6E+02 0.0078 22.5 7.3 39 107-146 36-75 (200)
286 PF13207 AAA_17: AAA domain; P 25.7 61 0.0013 24.1 2.4 32 109-147 1-32 (121)
287 PF00484 Pro_CA: Carbonic anhy 25.1 1.5E+02 0.0032 23.4 4.6 36 159-200 38-73 (153)
288 cd07214 Pat17_isozyme_like Pat 25.1 48 0.001 30.6 2.0 18 185-202 46-63 (349)
289 PF00004 AAA: ATPase family as 25.1 1.9E+02 0.0042 21.4 5.2 56 110-172 1-56 (132)
290 cd07213 Pat17_PNPLA8_PNPLA9_li 24.8 53 0.0011 29.3 2.2 18 185-202 37-54 (288)
291 cd07205 Pat_PNPLA6_PNPLA7_NTE1 24.8 54 0.0012 26.6 2.0 18 185-202 31-48 (175)
292 PF05576 Peptidase_S37: PS-10 24.6 1.1E+02 0.0023 28.9 4.0 93 104-215 62-164 (448)
293 cd07227 Pat_Fungal_NTE1 Fungal 24.2 97 0.0021 27.4 3.6 18 185-202 41-58 (269)
294 PF01734 Patatin: Patatin-like 23.7 58 0.0013 26.1 2.1 20 183-202 28-47 (204)
295 cd07199 Pat17_PNPLA8_PNPLA9_li 23.1 58 0.0013 28.4 2.0 18 185-202 37-54 (258)
296 cd07217 Pat17_PNPLA8_PNPLA9_li 23.1 57 0.0012 30.0 2.1 18 185-202 44-61 (344)
297 cd07204 Pat_PNPLA_like Patatin 22.7 96 0.0021 26.9 3.3 19 185-203 34-52 (243)
298 cd07210 Pat_hypo_W_succinogene 22.3 1.2E+02 0.0026 25.8 3.8 18 185-202 31-48 (221)
299 cd03379 beta_CA_cladeD Carboni 22.3 1.1E+02 0.0025 23.9 3.4 27 161-193 41-67 (142)
300 PF06309 Torsin: Torsin; Inte 22.2 3.1E+02 0.0067 21.2 5.6 12 104-116 51-62 (127)
301 COG4050 Uncharacterized protei 21.7 3.7E+02 0.0079 20.4 5.6 24 127-150 106-129 (152)
302 COG0529 CysC Adenylylsulfate k 21.6 1.8E+02 0.0039 24.1 4.3 38 104-146 21-58 (197)
303 cd04251 AAK_NAGK-UC AAK_NAGK-U 21.5 1E+02 0.0022 26.9 3.3 9 109-117 27-35 (257)
304 PRK15219 carbonic anhydrase; P 21.3 1.2E+02 0.0025 26.5 3.5 34 160-199 127-160 (245)
305 PRK13703 conjugal pilus assemb 21.2 2.6E+02 0.0057 24.4 5.6 51 108-162 146-196 (248)
306 cd07215 Pat17_PNPLA8_PNPLA9_li 21.2 64 0.0014 29.4 2.0 16 185-200 43-58 (329)
307 PLN02840 tRNA dimethylallyltra 21.2 5.2E+02 0.011 24.6 8.0 33 107-146 21-53 (421)
308 PF05116 S6PP: Sucrose-6F-phos 20.9 64 0.0014 28.0 1.9 26 162-191 166-191 (247)
309 TIGR00632 vsr DNA mismatch end 20.9 2E+02 0.0043 21.9 4.2 12 107-118 57-68 (117)
310 cd07222 Pat_PNPLA4 Patatin-lik 20.6 98 0.0021 26.9 3.0 16 185-200 34-49 (246)
311 cd07208 Pat_hypo_Ecoli_yjju_li 20.5 71 0.0015 28.0 2.1 19 185-203 30-48 (266)
312 TIGR02195 heptsyl_trn_II lipop 20.4 6.3E+02 0.014 22.7 8.7 21 179-200 250-270 (334)
313 COG0450 AhpC Peroxiredoxin [Po 20.3 5.2E+02 0.011 21.6 7.6 98 107-219 35-133 (194)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=1.4e-51 Score=367.49 Aligned_cols=322 Identities=44% Similarity=0.685 Sum_probs=274.2
Q ss_pred cccCcCCCCCCccHHHHHHHHHHHHHHhhccCCCCceeeehhhhcccCCCCCCCCCCCceEEEEEEeCCCCeEEEEeecC
Q 019193 5 EEVNLNDSKMVVPLHTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIVDRGTNLLCRIYRPT 84 (344)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 84 (344)
++.+........+..+............+....++++.|.+.. ...+|+..++..++..+++++...+++.+|+|.|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~r~~~~--~~~~p~~~~p~~~v~~~dv~~~~~~~l~vRly~P~ 82 (336)
T KOG1515|consen 5 LVDTLFWKLRVLPHLFEPLLSVDYLFENIRIFKDGSFERFFGR--FDKVPPSSDPVNGVTSKDVTIDPFTNLPVRLYRPT 82 (336)
T ss_pred ccccccccceeeeccccchhhhhhhhhhceeecCCceeeeecc--cccCCCCCCcccCceeeeeEecCCCCeEEEEEcCC
Confidence 4445544444555555555555555556677788999887764 35677778888889999999988899999999998
Q ss_pred CCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHH
Q 019193 85 NGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWT 164 (344)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~ 164 (344)
... +..+. |+|||||||||++|+.....|+.+|.++|.+.+++|+++|||++||+++|++++|+++
T Consensus 83 ~~~-------------~~~~~-p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~ 148 (336)
T KOG1515|consen 83 SSS-------------SETKL-PVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWA 148 (336)
T ss_pred CCC-------------cccCc-eEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHH
Confidence 762 12577 9999999999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHHhc-ccccCCCCCCeEEEeeCCchHHHHHHHHHHhccc---CCeeeEEEEeccccCCCCCChhhhh--hCCCCcc
Q 019193 165 VLKWAKSR-SWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES---EVEILGNILLNPMFGGQERTESEKR--LDGKYFV 238 (344)
Q Consensus 165 a~~~l~~~-~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~---~~~i~~~il~~p~~~~~~~~~~~~~--~~~~~~~ 238 (344)
|++|+.++ ...++.|++ ||+|+|+|+|||+|..++++..+. .++++|+|+++|++.......++.+ ....+..
T Consensus 149 Al~w~~~~~~~~~~~D~~-rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~ 227 (336)
T KOG1515|consen 149 ALKWVLKNSWLKLGADPS-RVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPEL 227 (336)
T ss_pred HHHHHHHhHHHHhCCCcc-cEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcch
Confidence 99999998 556679999 999999999999999999998643 4799999999999999988877666 5555677
Q ss_pred CHHhHHHHHHHhCCCCC-CCCCCCCCCCC-CCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCC
Q 019193 239 TVQDRDWYWRAYLPEGA-NRDHPACNPFG-PKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQA 316 (344)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~ 316 (344)
.....+.+|+.++|++. +.++|.++++. ....+.....+||++|++++.|.++|++..|+++|+++|+++++.+++++
T Consensus 228 ~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~ 307 (336)
T KOG1515|consen 228 ARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDG 307 (336)
T ss_pred hHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCC
Confidence 77888889999999998 79999999986 33334444459999999999999999999999999999999999999999
Q ss_pred ceEEEECCC-chHHHHHHHHHHHHHhcc
Q 019193 317 TIGFYFLPN-NGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 317 ~H~f~~~~~-~~~~~~~~~~~~~fl~~~ 343 (344)
.|+|..++. .+.+.+.++.+.+|++++
T Consensus 308 ~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 308 FHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred eeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999865 478999999999999875
No 2
>PRK10162 acetyl esterase; Provisional
Probab=100.00 E-value=5.1e-41 Score=304.33 Aligned_cols=255 Identities=21% Similarity=0.299 Sum_probs=210.5
Q ss_pred ceEEEEEEeCCCC-eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcE
Q 019193 63 VFSFDVIVDRGTN-LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV 141 (344)
Q Consensus 63 ~~~~~~~~~~~~~-~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~ 141 (344)
+..+++++++..+ +.+++|.|... .. |+|||+|||||+.|+... +..+|+.|+.+.|+.
T Consensus 55 ~~~~~~~i~~~~g~i~~~~y~P~~~-----------------~~-p~vv~~HGGg~~~g~~~~--~~~~~~~la~~~g~~ 114 (318)
T PRK10162 55 MATRAYMVPTPYGQVETRLYYPQPD-----------------SQ-ATLFYLHGGGFILGNLDT--HDRIMRLLASYSGCT 114 (318)
T ss_pred ceEEEEEEecCCCceEEEEECCCCC-----------------CC-CEEEEEeCCcccCCCchh--hhHHHHHHHHHcCCE
Confidence 4467777776544 99999999643 45 999999999999988765 678999999978999
Q ss_pred EEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccC---CeeeEEEEecc
Q 019193 142 VVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE---VEILGNILLNP 218 (344)
Q Consensus 142 vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~---~~i~~~il~~p 218 (344)
|+++|||++|++++|..++|+.++++|+.++...+++|++ +|+|+|+|+||++|+.++.+..+.+ .+++++++++|
T Consensus 115 Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~-~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 115 VIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMS-RIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred EEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChh-HEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 9999999999999999999999999999999888889999 9999999999999999998765432 47899999999
Q ss_pred ccCCCCCChhhhhhCCC-CccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCc-CCCCCCcEEEEEcCCCcChHHHHH
Q 019193 219 MFGGQERTESEKRLDGK-YFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDL-VGVKFPKSLVVVAGLDLIQDWQLA 296 (344)
Q Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pP~li~~G~~D~l~~~~~~ 296 (344)
+++... .++...+... ..+....+++++..|+++..+..++..++.. .++ .. +||++|++|+.|+++++++.
T Consensus 194 ~~~~~~-~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~---~~l~~~--lPp~~i~~g~~D~L~de~~~ 267 (318)
T PRK10162 194 LYGLRD-SVSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFN---NDLTRD--VPPCFIAGAEFDPLLDDSRL 267 (318)
T ss_pred ccCCCC-ChhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcch---hhhhcC--CCCeEEEecCCCcCcChHHH
Confidence 998643 2222222222 2466677888999998765555556655532 222 22 89999999999999999999
Q ss_pred HHHHHHHCCCCEEEEEeCCCceEEEECC-CchHHHHHHHHHHHHHhccC
Q 019193 297 YMEGLKKAGQDVKLLYLEQATIGFYFLP-NNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 297 ~~~~L~~~g~~~~~~~~~g~~H~f~~~~-~~~~~~~~~~~~~~fl~~~l 344 (344)
|+++|+++|+++++++|+|+.|+|..+. ..++.+++++++.+||+++|
T Consensus 268 ~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 268 LYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred HHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998763 46889999999999998864
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=100.00 E-value=3.6e-39 Score=292.51 Aligned_cols=248 Identities=29% Similarity=0.517 Sum_probs=207.1
Q ss_pred CCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC
Q 019193 73 GTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE 152 (344)
Q Consensus 73 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~ 152 (344)
...+++++|.|... ...+. |+|||+|||||+.|+... ++..++.++...|+.|+++|||++||
T Consensus 61 ~~~~~~~~y~p~~~--------------~~~~~-p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe 123 (312)
T COG0657 61 GDGVPVRVYRPDRK--------------AAATA-PVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPE 123 (312)
T ss_pred CCceeEEEECCCCC--------------CCCCC-cEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCC
Confidence 34588999999221 13456 999999999999999877 57889999998899999999999999
Q ss_pred CCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhccc-CCeeeEEEEeccccCCCCCChhhhh
Q 019193 153 NRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES-EVEILGNILLNPMFGGQERTESEKR 231 (344)
Q Consensus 153 ~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~-~~~i~~~il~~p~~~~~~~~~~~~~ 231 (344)
++||..++|+.++++|+.++..++++|++ +|+|+|+|+|||||+.+++...+. ...+.++++++|+++......+...
T Consensus 124 ~~~p~~~~d~~~a~~~l~~~~~~~g~dp~-~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~ 202 (312)
T COG0657 124 HPFPAALEDAYAAYRWLRANAAELGIDPS-RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPG 202 (312)
T ss_pred CCCCchHHHHHHHHHHHHhhhHhhCCCcc-ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhh
Confidence 99999999999999999999988999999 999999999999999999998765 3578999999999998763333444
Q ss_pred hCCCCccCHHhHH-HHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEE
Q 019193 232 LDGKYFVTVQDRD-WYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKL 310 (344)
Q Consensus 232 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~ 310 (344)
....+.+...... ++...|.+...+...+..+|+... .+.. +||++|++|+.|++++++..|+++|+++|+++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~--~~~~--lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~ 278 (312)
T COG0657 203 YGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASD--DLSG--LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVEL 278 (312)
T ss_pred cCCccccCHHHHHHHHHHHhCcCccccCCCccCccccc--cccC--CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEE
Confidence 4444555555544 788888877666666677775432 2333 8999999999999999999999999999999999
Q ss_pred EEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 311 LYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 311 ~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
..++|+.|+|..... +.+.+.+.++.+|+++.
T Consensus 279 ~~~~g~~H~f~~~~~-~~a~~~~~~~~~~l~~~ 310 (312)
T COG0657 279 RVYPGMIHGFDLLTG-PEARSALRQIAAFLRAA 310 (312)
T ss_pred EEeCCcceeccccCc-HHHHHHHHHHHHHHHHh
Confidence 999999999977755 77888899999998754
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=100.00 E-value=8.1e-38 Score=267.93 Aligned_cols=205 Identities=33% Similarity=0.560 Sum_probs=170.1
Q ss_pred EEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEee
Q 019193 109 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAG 188 (344)
Q Consensus 109 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G 188 (344)
|||||||||+.|+... +..+++.++++.|++|+++|||++|++++|++++|+.++++|+.+++..+++|++ +|+|+|
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~-~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPE-RIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEE-EEEEEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeecccccccccccc-ceEEee
Confidence 7999999999998877 5788999998669999999999999999999999999999999999878889999 999999
Q ss_pred CCchHHHHHHHHHHhccc-CCeeeEEEEeccccCC-CCCChhh---hhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCC
Q 019193 189 DSSGGNIVHHVALRAVES-EVEILGNILLNPMFGG-QERTESE---KRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACN 263 (344)
Q Consensus 189 ~SaGG~lA~~~a~~~~~~-~~~i~~~il~~p~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (344)
+|+||+||+.++.+..+. ...+++++++||+++. ....++. ......++++....+.++..+.+ ..+.+++..+
T Consensus 78 ~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s 156 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP-GSDRDDPLAS 156 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS-TGGTTSTTTS
T ss_pred cccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccccc-cccccccccc
Confidence 999999999999987665 3579999999999988 4444443 23345567778888888888876 5566677777
Q ss_pred CCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEE
Q 019193 264 PFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFY 321 (344)
Q Consensus 264 ~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~ 321 (344)
|+.. .+... +||++|++|+.|++++++..|+++|++.|+++++++++|+.|+|.
T Consensus 157 p~~~--~~~~~--~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 157 PLNA--SDLKG--LPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp GGGS--SCCTT--CHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred cccc--ccccc--CCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 7643 13333 899999999999999999999999999999999999999999884
No 5
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.91 E-value=1.3e-22 Score=181.90 Aligned_cols=209 Identities=16% Similarity=0.200 Sum_probs=149.0
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhh-CCcEEEeeccCCCC----CCCCCchhhHHHHHHHHHHhcccccCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGT-CKAVVVSVNYRRAP----ENRYPCAYDDGWTVLKWAKSRSWLQSK 178 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~-~g~~vv~~dyr~~p----~~~~~~~~~D~~~a~~~l~~~~~~~~~ 178 (344)
.. |+|||+|||||..+..... -.+...+... -...++.+||.+++ ++.||.++.++.+.++++.+..
T Consensus 121 ~D-pVlIYlHGGGY~l~~~p~q--i~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~----- 192 (374)
T PF10340_consen 121 SD-PVLIYLHGGGYFLGTTPSQ--IEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE----- 192 (374)
T ss_pred CC-cEEEEEcCCeeEecCCHHH--HHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc-----
Confidence 45 9999999999998776543 2332222221 16799999999998 8999999999999999999542
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHHhccc--CCeeeEEEEeccccCCCCCCh----hhhhhCCCCccCHHhHHHHHHHhCC
Q 019193 179 DSKAHIYLAGDSSGGNIVHHVALRAVES--EVEILGNILLNPMFGGQERTE----SEKRLDGKYFVTVQDRDWYWRAYLP 252 (344)
Q Consensus 179 d~~~~i~l~G~SaGG~lA~~~a~~~~~~--~~~i~~~il~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
..+ +|.|||+||||||++.+.+..... .+.++.+|++|||+....... +.......+.+.......+.+.|.+
T Consensus 193 G~~-nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~ 271 (374)
T PF10340_consen 193 GNK-NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSMFGDAYIG 271 (374)
T ss_pred CCC-eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCccccccccccccchhhHHHHHHhhcc
Confidence 235 899999999999999998887542 246799999999998773221 1222334466666666777788877
Q ss_pred CCCCCCCCCCCCCCCC-----CCCcCCC-CCCcEEEEEcCCCcChHHHHHHHHHHHHCCC-----CEEEEEeCCCceEEE
Q 019193 253 EGANRDHPACNPFGPK-----GIDLVGV-KFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQ-----DVKLLYLEQATIGFY 321 (344)
Q Consensus 253 ~~~~~~~~~~~~~~~~-----~~~~~~~-~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~-----~~~~~~~~g~~H~f~ 321 (344)
+..........++... ..+|+.. +-..++|+.|+++.++|+..++++++...+. .+++.+.+++.|.-.
T Consensus 272 ~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~EvfrddI~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 272 NNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFRDDILEWAKKLNDVKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred ccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccHHHHHHHHHHHhhcCccccCCcceEEEecCCccccc
Confidence 6222222222222111 1233332 1236999999999999999999999997653 478888999999764
No 6
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.90 E-value=1.2e-22 Score=185.65 Aligned_cols=109 Identities=34% Similarity=0.528 Sum_probs=97.4
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 186 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l 186 (344)
-+|+.+|||||+..+..+ +..+.+.+|..+|+-|+++||.++||.|||.+++++.-|+.|+.+|.+..|-..+ ||++
T Consensus 397 sli~HcHGGGfVAqsSkS--HE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~TgE-riv~ 473 (880)
T KOG4388|consen 397 SLIVHCHGGGFVAQSSKS--HEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTGE-RIVL 473 (880)
T ss_pred eEEEEecCCceeeecccc--ccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccc-eEEE
Confidence 589999999999877665 6888999999999999999999999999999999999999999999998887778 9999
Q ss_pred eeCCchHHHHHHHHHHhcccCCe-eeEEEEecc
Q 019193 187 AGDSSGGNIVHHVALRAVESEVE-ILGNILLNP 218 (344)
Q Consensus 187 ~G~SaGG~lA~~~a~~~~~~~~~-i~~~il~~p 218 (344)
+|+|+||||...++++..+.+++ +.|+++-||
T Consensus 474 aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 474 AGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred eccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 99999999999999998665543 577777663
No 7
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.89 E-value=6.3e-22 Score=194.33 Aligned_cols=238 Identities=16% Similarity=0.130 Sum_probs=164.7
Q ss_pred CceEEEEEEeCCCC--eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCC
Q 019193 62 GVFSFDVIVDRGTN--LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK 139 (344)
Q Consensus 62 ~~~~~~~~~~~~~~--~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g 139 (344)
..+.+.+++.+.++ +...++.|.+.. +.++. |+|||+|||....-. ..+....+.|+.+ |
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~~~-------------~~k~y-P~i~~~hGGP~~~~~---~~~~~~~q~~~~~-G 423 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPGFD-------------PRKKY-PLIVYIHGGPSAQVG---YSFNPEIQVLASA-G 423 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCCCC-------------CCCCC-CEEEEeCCCCccccc---cccchhhHHHhcC-C
Confidence 34455667766544 888899998763 23458 999999999753322 2367788899988 9
Q ss_pred cEEEeeccCCCCCC-----------CCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCC
Q 019193 140 AVVVSVNYRRAPEN-----------RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEV 208 (344)
Q Consensus 140 ~~vv~~dyr~~p~~-----------~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~ 208 (344)
|+|+.+|||.+..+ .....++|+.++++|+.+.+. +|++ ||+|+|+|.||.++++.+.+.+
T Consensus 424 ~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~---~d~~-ri~i~G~SyGGymtl~~~~~~~---- 495 (620)
T COG1506 424 YAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPL---VDPE-RIGITGGSYGGYMTLLAATKTP---- 495 (620)
T ss_pred eEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCC---cChH-HeEEeccChHHHHHHHHHhcCc----
Confidence 99999999977552 234578999999999988776 9999 9999999999999999888754
Q ss_pred eeeEEEEeccccCCCCCCh-hhhhhCCCCccCHHhHHHHHHHhCCCCC--CCCCCCCCCCCCCCCCcCCCCCCcEEEEEc
Q 019193 209 EILGNILLNPMFGGQERTE-SEKRLDGKYFVTVQDRDWYWRAYLPEGA--NRDHPACNPFGPKGIDLVGVKFPKSLVVVA 285 (344)
Q Consensus 209 ~i~~~il~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~pP~li~~G 285 (344)
.+++.+...+.++...... ....+.. .+........ .......+|+.. ...+ ..|+||+||
T Consensus 496 ~f~a~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~sp~~~-~~~i----~~P~LliHG 559 (620)
T COG1506 496 RFKAAVAVAGGVDWLLYFGESTEGLRF-----------DPEENGGGPPEDREKYEDRSPIFY-ADNI----KTPLLLIHG 559 (620)
T ss_pred hhheEEeccCcchhhhhccccchhhcC-----------CHHHhCCCcccChHHHHhcChhhh-hccc----CCCEEEEee
Confidence 3677776666544322111 0000000 0000000000 000111222211 0122 458999999
Q ss_pred CCCcCh--HHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 286 GLDLIQ--DWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 286 ~~D~l~--~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
+.|..+ +++.++.++|+..|+++++++||+.+|++.. .+...+.++++.+|+++++
T Consensus 560 ~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 560 EEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---PENRVKVLKEILDWFKRHL 617 (620)
T ss_pred cCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---chhHHHHHHHHHHHHHHHh
Confidence 999664 5889999999999999999999999999864 2457889999999999875
No 8
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.86 E-value=4.1e-20 Score=158.65 Aligned_cols=231 Identities=20% Similarity=0.234 Sum_probs=153.2
Q ss_pred CeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCC-
Q 019193 75 NLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN- 153 (344)
Q Consensus 75 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~- 153 (344)
.+..+.|.|... ++++ ..|+++||.| ...+..|..++.+|+.. |+.|+.+||+.....
T Consensus 39 ~lft~~W~p~~~---------------~~pr-~lv~~~HG~g----~~~s~~~~~~a~~l~~~-g~~v~a~D~~GhG~Sd 97 (313)
T KOG1455|consen 39 KLFTQSWLPLSG---------------TEPR-GLVFLCHGYG----EHSSWRYQSTAKRLAKS-GFAVYAIDYEGHGRSD 97 (313)
T ss_pred EeEEEecccCCC---------------CCCc-eEEEEEcCCc----ccchhhHHHHHHHHHhC-CCeEEEeeccCCCcCC
Confidence 477888998664 2467 8999999965 33334588999999998 999999999965332
Q ss_pred -------CCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCC
Q 019193 154 -------RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT 226 (344)
Q Consensus 154 -------~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~ 226 (344)
.+...++|+.+-++.++.+.+ +++...+++||||||.+++.++.+.+. ...|+|+++|++-.....
T Consensus 98 Gl~~yi~~~d~~v~D~~~~~~~i~~~~e----~~~lp~FL~GeSMGGAV~Ll~~~k~p~---~w~G~ilvaPmc~i~~~~ 170 (313)
T KOG1455|consen 98 GLHAYVPSFDLVVDDVISFFDSIKEREE----NKGLPRFLFGESMGGAVALLIALKDPN---FWDGAILVAPMCKISEDT 170 (313)
T ss_pred CCcccCCcHHHHHHHHHHHHHHHhhccc----cCCCCeeeeecCcchHHHHHHHhhCCc---ccccceeeecccccCCcc
Confidence 234566888888888877765 233389999999999999999987544 689999999998665543
Q ss_pred hhhhhhCCCCccCHHhHHHHHHHhCCC------C--------------CCCCCCCCCCCCCCC----------CCcC-CC
Q 019193 227 ESEKRLDGKYFVTVQDRDWYWRAYLPE------G--------------ANRDHPACNPFGPKG----------IDLV-GV 275 (344)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------------~~~~~~~~~~~~~~~----------~~~~-~~ 275 (344)
..... ..........++|. . ....+|.+..-.++. .+++ .+
T Consensus 171 kp~p~--------v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l 242 (313)
T KOG1455|consen 171 KPHPP--------VISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNL 242 (313)
T ss_pred CCCcH--------HHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhc
Confidence 21000 00000011111110 0 011233332211111 0111 11
Q ss_pred C--CCcEEEEEcCCCcChHHH--HHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 276 K--FPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 276 ~--~pP~li~~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
. .-|.+|+||++|.+.|.. +.+++... ..+.+++.|||+.|+.......+..+.++.+|++||+++
T Consensus 243 ~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~--S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 243 NEVTVPFLILHGTDDKVTDPKVSKELYEKAS--SSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ccccccEEEEecCCCcccCcHHHHHHHHhcc--CCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 1 348999999999998753 55555533 457899999999999876333477899999999999976
No 9
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.86 E-value=1.6e-19 Score=160.74 Aligned_cols=221 Identities=15% Similarity=0.165 Sum_probs=139.9
Q ss_pred CeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccC--CCC-
Q 019193 75 NLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR--RAP- 151 (344)
Q Consensus 75 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr--~~p- 151 (344)
...+.+|.|++.. .++. |+|+++||+|- +.....+......++.+.|+.|++||+. ...
T Consensus 26 ~~~~~v~~P~~~~--------------~~~~-P~vvllHG~~~---~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~ 87 (275)
T TIGR02821 26 PMTFGVFLPPQAA--------------AGPV-PVLWYLSGLTC---THENFMIKAGAQRFAAEHGLALVAPDTSPRGTGI 87 (275)
T ss_pred ceEEEEEcCCCcc--------------CCCC-CEEEEccCCCC---CccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCC
Confidence 3678899997641 2467 99999999662 2222112223456776669999999983 211
Q ss_pred -C----------CC-C------C-----chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCC
Q 019193 152 -E----------NR-Y------P-----CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEV 208 (344)
Q Consensus 152 -~----------~~-~------~-----~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~ 208 (344)
. .. | + .....+.+.+..+.+. .++++.+ +++|+|+||||++|+.++.+.++
T Consensus 88 ~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~-~~~~~G~S~GG~~a~~~a~~~p~--- 161 (275)
T TIGR02821 88 AGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAA--QFPLDGE-RQGITGHSMGGHGALVIALKNPD--- 161 (275)
T ss_pred CCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHh--hCCCCCC-ceEEEEEChhHHHHHHHHHhCcc---
Confidence 0 00 0 0 1112222222222222 2347888 99999999999999999998776
Q ss_pred eeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCC
Q 019193 209 EILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLD 288 (344)
Q Consensus 209 ~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D 288 (344)
.++++++++|+.+..... . .......++..... .....++.. ...... ..||++|.||+.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~----------~-----~~~~~~~~l~~~~~-~~~~~~~~~-~~~~~~--~~~plli~~G~~D 222 (275)
T TIGR02821 162 RFKSVSAFAPIVAPSRCP----------W-----GQKAFSAYLGADEA-AWRSYDASL-LVADGG--RHSTILIDQGTAD 222 (275)
T ss_pred cceEEEEECCccCcccCc----------c-----hHHHHHHHhccccc-chhhcchHH-HHhhcc--cCCCeeEeecCCC
Confidence 689999999997643210 0 01122333332111 111111110 001111 1679999999999
Q ss_pred cChHH---HHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 289 LIQDW---QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 289 ~l~~~---~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
++++. ...+.++|+++|+++++.+++|++|+|.. ....+++.++|..+++
T Consensus 223 ~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 223 QFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------IASFIADHLRHHAERL 275 (275)
T ss_pred cccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------HHHhHHHHHHHHHhhC
Confidence 98875 46899999999999999999999999964 3457888888888765
No 10
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.85 E-value=1.3e-20 Score=161.45 Aligned_cols=187 Identities=18% Similarity=0.191 Sum_probs=130.1
Q ss_pred HHHHHHHHhhCCcEEEeeccCCCCCC----------CC-CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHH
Q 019193 128 DILCRRLVGTCKAVVVSVNYRRAPEN----------RY-PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIV 196 (344)
Q Consensus 128 ~~~~~~la~~~g~~vv~~dyr~~p~~----------~~-~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA 196 (344)
......|+++ ||+|+.+|||.++++ .+ ...++|+.++++|+.++.. +|++ ||+|+|+|+||+++
T Consensus 4 ~~~~~~la~~-Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---iD~~-ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 4 NWNAQLLASQ-GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY---IDPD-RIGIMGHSYGGYLA 78 (213)
T ss_dssp SHHHHHHHTT-T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS---EEEE-EEEEEEETHHHHHH
T ss_pred eHHHHHHHhC-CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc---ccce-eEEEEccccccccc
Confidence 3445677777 999999999987742 11 2357999999999998864 8999 99999999999999
Q ss_pred HHHHHHhcccCCeeeEEEEeccccCCCCCChhhhh------hC-CCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCC
Q 019193 197 HHVALRAVESEVEILGNILLNPMFGGQERTESEKR------LD-GKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKG 269 (344)
Q Consensus 197 ~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (344)
+.++.+.++ .+++++..+|+++.......... .. ..+.......+.. ++..+.
T Consensus 79 ~~~~~~~~~---~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------s~~~~~- 138 (213)
T PF00326_consen 79 LLAATQHPD---RFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYREL----------------SPISPA- 138 (213)
T ss_dssp HHHHHHTCC---GSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHH----------------HHGGGG-
T ss_pred chhhcccce---eeeeeeccceecchhcccccccccccccccccCccchhhhhhhhh----------------cccccc-
Confidence 999986665 68999999999887654332100 00 0000011111111 111100
Q ss_pred CCcCCCCCCcEEEEEcCCCcCh--HHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 270 IDLVGVKFPKSLVVVAGLDLIQ--DWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 270 ~~~~~~~~pP~li~~G~~D~l~--~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
.... ..+|+||+||+.|..+ .++..++++|++.|+++++.+|++++|++. ..+...+..+++.+|++++|
T Consensus 139 ~~~~--~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~---~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 139 DNVQ--IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG---NPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp GGCG--GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT---SHHHHHHHHHHHHHHHHHHT
T ss_pred cccc--CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC---CchhHHHHHHHHHHHHHHHc
Confidence 0100 1579999999999876 578999999999999999999999999653 22445689999999999876
No 11
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=1.3e-18 Score=159.10 Aligned_cols=233 Identities=18% Similarity=0.220 Sum_probs=140.4
Q ss_pred CCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC
Q 019193 73 GTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE 152 (344)
Q Consensus 73 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~ 152 (344)
+..+.++.|.|.+. ..+. ++||++||.|- +.. ..+..++..|+++ ||.|+++|+|...+
T Consensus 42 g~~l~~~~~~~~~~---------------~~~~-~~VvllHG~~~---~~~-~~~~~~~~~L~~~-Gy~V~~~D~rGhG~ 100 (330)
T PLN02298 42 GLSLFTRSWLPSSS---------------SPPR-ALIFMVHGYGN---DIS-WTFQSTAIFLAQM-GFACFALDLEGHGR 100 (330)
T ss_pred CCEEEEEEEecCCC---------------CCCc-eEEEEEcCCCC---Ccc-eehhHHHHHHHhC-CCEEEEecCCCCCC
Confidence 34477778877543 1356 99999999541 222 1256677788877 99999999996543
Q ss_pred CC--------CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCC
Q 019193 153 NR--------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE 224 (344)
Q Consensus 153 ~~--------~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~ 224 (344)
.. +....+|+.++++++..... .+.. +++|+|||+||.+|+.++...++ +++++|+++|+.....
T Consensus 101 S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---~~~~-~i~l~GhSmGG~ia~~~a~~~p~---~v~~lvl~~~~~~~~~ 173 (330)
T PLN02298 101 SEGLRAYVPNVDLVVEDCLSFFNSVKQREE---FQGL-PRFLYGESMGGAICLLIHLANPE---GFDGAVLVAPMCKISD 173 (330)
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHhccc---CCCC-CEEEEEecchhHHHHHHHhcCcc---cceeEEEecccccCCc
Confidence 32 22346888999998876532 3445 89999999999999988887654 6999999999865432
Q ss_pred CChhhhhhCCCCccCHHhHHHHHHHhCCCCC-----C---------------CCCCC-C--CCC--------CC---CCC
Q 019193 225 RTESEKRLDGKYFVTVQDRDWYWRAYLPEGA-----N---------------RDHPA-C--NPF--------GP---KGI 270 (344)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---------------~~~~~-~--~~~--------~~---~~~ 270 (344)
...... .......+...+.+... . ..++. . .+. .. ...
T Consensus 174 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (330)
T PLN02298 174 KIRPPW--------PIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGK 245 (330)
T ss_pred ccCCch--------HHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHH
Confidence 110000 00000000001110000 0 00000 0 000 00 000
Q ss_pred CcCCCCCCcEEEEEcCCCcChHHH--HHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 271 DLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 271 ~~~~~~~pP~li~~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
.+..+ ..|+||+||++|.+++.. +.+++++.. ...++++++|++|...........+.+.+++.+||.+++
T Consensus 246 ~l~~i-~~PvLii~G~~D~ivp~~~~~~l~~~i~~--~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 246 KLKDV-SIPFIVLHGSADVVTDPDVSRALYEEAKS--EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred hhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHhcc--CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 11111 358999999999987643 444444432 357999999999987654222345778999999998764
No 12
>PRK10566 esterase; Provisional
Probab=99.82 E-value=1.2e-18 Score=152.88 Aligned_cols=201 Identities=13% Similarity=0.089 Sum_probs=126.4
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCC-------CCC-------chhhHHHHHHHH
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-------RYP-------CAYDDGWTVLKW 168 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~-------~~~-------~~~~D~~~a~~~ 168 (344)
++. |+||++||++. +.. .+..+++.|+++ |+.|+.+|||..+.. .+. ..++|+.++++|
T Consensus 25 ~~~-p~vv~~HG~~~---~~~--~~~~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T PRK10566 25 TPL-PTVFFYHGFTS---SKL--VYSYFAVALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAA 97 (249)
T ss_pred CCC-CEEEEeCCCCc---ccc--hHHHHHHHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 467 99999999642 332 267788899887 999999999964321 111 235777788888
Q ss_pred HHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEe--ccccCCCCCChhhhh-hCCC---CccCHHh
Q 019193 169 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL--NPMFGGQERTESEKR-LDGK---YFVTVQD 242 (344)
Q Consensus 169 l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~--~p~~~~~~~~~~~~~-~~~~---~~~~~~~ 242 (344)
+.+... +|++ +|+|+|+|+||.+|+.++.+.++ +.+.+.+ ++++.. .... +... .......
T Consensus 98 l~~~~~---~~~~-~i~v~G~S~Gg~~al~~~~~~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 164 (249)
T PRK10566 98 IREEGW---LLDD-RLAVGGASMGGMTALGIMARHPW----VKCVASLMGSGYFTS-----LARTLFPPLIPETAAQQAE 164 (249)
T ss_pred HHhcCC---cCcc-ceeEEeecccHHHHHHHHHhCCC----eeEEEEeeCcHHHHH-----HHHHhcccccccccccHHH
Confidence 877643 7888 99999999999999998876543 4444333 222210 0000 0000 0000011
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCC--CEEEEEeCCCce
Q 019193 243 RDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQ--DVKLLYLEQATI 318 (344)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~--~~~~~~~~g~~H 318 (344)
...+..... . .++. ..+......|+|++||+.|.+++ ++..+.++++.+|. ++++..|+|++|
T Consensus 165 ~~~~~~~~~-----~----~~~~----~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H 231 (249)
T PRK10566 165 FNNIVAPLA-----E----WEVT----HQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRH 231 (249)
T ss_pred HHHHHHHHh-----h----cChh----hhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCC
Confidence 111111100 0 0000 01111112489999999998865 67888899998886 489999999999
Q ss_pred EEEECCCchHHHHHHHHHHHHHhccC
Q 019193 319 GFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 319 ~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
.+. .+.++++.+||+++|
T Consensus 232 ~~~--------~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 232 RIT--------PEALDAGVAFFRQHL 249 (249)
T ss_pred ccC--------HHHHHHHHHHHHhhC
Confidence 862 347899999999876
No 13
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.81 E-value=1.4e-17 Score=153.54 Aligned_cols=236 Identities=18% Similarity=0.196 Sum_probs=135.2
Q ss_pred eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC-
Q 019193 76 LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR- 154 (344)
Q Consensus 76 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~- 154 (344)
+.+..+.|.+. .+. |+||++||.|. +.. ..+..++..|+++ ||.|+++|||......
T Consensus 74 l~~~~~~p~~~----------------~~~-~~iv~lHG~~~---~~~-~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~ 131 (349)
T PLN02385 74 IFSKSWLPENS----------------RPK-AAVCFCHGYGD---TCT-FFFEGIARKIASS-GYGVFAMDYPGFGLSEG 131 (349)
T ss_pred EEEEEEecCCC----------------CCC-eEEEEECCCCC---ccc-hHHHHHHHHHHhC-CCEEEEecCCCCCCCCC
Confidence 66667777543 356 99999999552 222 2246778888877 9999999999654322
Q ss_pred -------CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCCh
Q 019193 155 -------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTE 227 (344)
Q Consensus 155 -------~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~ 227 (344)
+....+|+.+.++++..... .+.. +++|+|||+||.+|+.++.+.++ .++++|+++|+........
T Consensus 132 ~~~~~~~~~~~~~dv~~~l~~l~~~~~---~~~~-~~~LvGhSmGG~val~~a~~~p~---~v~glVLi~p~~~~~~~~~ 204 (349)
T PLN02385 132 LHGYIPSFDDLVDDVIEHYSKIKGNPE---FRGL-PSFLFGQSMGGAVALKVHLKQPN---AWDGAILVAPMCKIADDVV 204 (349)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHhccc---cCCC-CEEEEEeccchHHHHHHHHhCcc---hhhheeEeccccccccccc
Confidence 22345677777777654422 4455 89999999999999999988765 6999999999765322110
Q ss_pred --hh-h-------h-hCC------CCccCH---HhHHHHHHHhCCCCCCCCCCCC----CCCC---CCCCCcCCCCCCcE
Q 019193 228 --SE-K-------R-LDG------KYFVTV---QDRDWYWRAYLPEGANRDHPAC----NPFG---PKGIDLVGVKFPKS 280 (344)
Q Consensus 228 --~~-~-------~-~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~pP~ 280 (344)
.. . . ... ..+... .........+...... ..... ..+. .....+..+ ..|+
T Consensus 205 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~i-~~P~ 282 (349)
T PLN02385 205 PPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYK-DKPRLRTAVELLRTTQEIEMQLEEV-SLPL 282 (349)
T ss_pred CchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeC-CCcchHHHHHHHHHHHHHHHhcccC-CCCE
Confidence 00 0 0 000 000000 0000000000000000 00000 0000 000011111 3489
Q ss_pred EEEEcCCCcChHHH--HHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 281 LVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 281 li~~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
||+||++|.+++.. +.+++++. ..++++++|++++|...........+++++++.+||++++
T Consensus 283 Lii~G~~D~vv~~~~~~~l~~~~~--~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 283 LILHGEADKVTDPSVSKFLYEKAS--SSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEEEeCCCCccChHHHHHHHHHcC--CCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 99999999988643 34444332 2357899999999976543221235669999999999763
No 14
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.79 E-value=2e-17 Score=154.89 Aligned_cols=236 Identities=15% Similarity=0.098 Sum_probs=141.9
Q ss_pred EEEEEEeCCC--CeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEE
Q 019193 65 SFDVIVDRGT--NLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVV 142 (344)
Q Consensus 65 ~~~~~~~~~~--~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v 142 (344)
.+.++++..+ .+...++.|... ++. |+||++||.+ +...+.+..++..|+++ ||.|
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~----------------~~~-P~Vli~gG~~----~~~~~~~~~~~~~La~~-Gy~v 225 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGD----------------GPF-PTVLVCGGLD----SLQTDYYRLFRDYLAPR-GIAM 225 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCC----------------CCc-cEEEEeCCcc----cchhhhHHHHHHHHHhC-CCEE
Confidence 4556665433 488888888743 467 9888776633 22223356677888887 9999
Q ss_pred EeeccCCCCCCCC----CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 143 VSVNYRRAPENRY----PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 143 v~~dyr~~p~~~~----~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
+++|+|...+..- .+......++++|+..... +|.+ ||+++|+|+||++|+.++...++ +++++|+++|
T Consensus 226 l~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~---vd~~-ri~l~G~S~GG~~Al~~A~~~p~---ri~a~V~~~~ 298 (414)
T PRK05077 226 LTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPW---VDHT-RVAAFGFRFGANVAVRLAYLEPP---RLKAVACLGP 298 (414)
T ss_pred EEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcc---cCcc-cEEEEEEChHHHHHHHHHHhCCc---CceEEEEECC
Confidence 9999997554321 1222233577888887754 7889 99999999999999999877554 6999999998
Q ss_pred ccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCC---CCCCCCCCCCCCcCCCC-CCcEEEEEcCCCcChHHH
Q 019193 219 MFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDH---PACNPFGPKGIDLVGVK-FPKSLVVVAGLDLIQDWQ 294 (344)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~pP~li~~G~~D~l~~~~ 294 (344)
.++...... ...... +....+.+... ++....... .....+.......-..+ ..|+|+++|++|.+++..
T Consensus 299 ~~~~~~~~~--~~~~~~---p~~~~~~la~~-lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~ 372 (414)
T PRK05077 299 VVHTLLTDP--KRQQQV---PEMYLDVLASR-LGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEE 372 (414)
T ss_pred ccchhhcch--hhhhhc---hHHHHHHHHHH-hCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHH
Confidence 864211111 000000 00001111111 110000000 00000000000000001 238999999999998765
Q ss_pred HHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 295 LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 295 ~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
.. +.+.+...+.++.++++..| + +...++++.+.+||+++|
T Consensus 373 ~a--~~l~~~~~~~~l~~i~~~~~-~------e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 373 DS--RLIASSSADGKLLEIPFKPV-Y------RNFDKALQEISDWLEDRL 413 (414)
T ss_pred HH--HHHHHhCCCCeEEEccCCCc-c------CCHHHHHHHHHHHHHHHh
Confidence 43 45566566789999999733 2 357889999999999875
No 15
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.79 E-value=3.8e-18 Score=146.77 Aligned_cols=183 Identities=16% Similarity=0.085 Sum_probs=124.4
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC-CCC-----------------CchhhHHHH
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE-NRY-----------------PCAYDDGWT 164 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~-~~~-----------------~~~~~D~~~ 164 (344)
++. |+||++|+- .|-. .....++++||++ ||.|++||+-.... .+. ....+|+.+
T Consensus 12 ~~~-~~Vvv~~d~---~G~~--~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (218)
T PF01738_consen 12 GPR-PAVVVIHDI---FGLN--PNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQA 84 (218)
T ss_dssp SSE-EEEEEE-BT---TBS---HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHH
T ss_pred CCC-CEEEEEcCC---CCCc--hHHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHH
Confidence 467 999999993 2222 2367889999998 99999999643222 110 123467788
Q ss_pred HHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHH
Q 019193 165 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRD 244 (344)
Q Consensus 165 a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (344)
+++|+.++.. ++.+ +|.++|+|+||.+|+.++... ..+++.+..+|...... . .
T Consensus 85 a~~~l~~~~~---~~~~-kig~vGfc~GG~~a~~~a~~~----~~~~a~v~~yg~~~~~~--~-~--------------- 138 (218)
T PF01738_consen 85 AVDYLRAQPE---VDPG-KIGVVGFCWGGKLALLLAARD----PRVDAAVSFYGGSPPPP--P-L--------------- 138 (218)
T ss_dssp HHHHHHCTTT---CEEE-EEEEEEETHHHHHHHHHHCCT----TTSSEEEEES-SSSGGG--H-H---------------
T ss_pred HHHHHHhccc---cCCC-cEEEEEEecchHHhhhhhhhc----cccceEEEEcCCCCCCc--c-h---------------
Confidence 8999998864 6778 999999999999999887654 26899999999110000 0 0
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHH--HHHHHHHHHCCCCEEEEEeCCCceEEEE
Q 019193 245 WYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYF 322 (344)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~g~~H~f~~ 322 (344)
.. . ..+ ..|+++++|+.|+..+.. ..+.+.|++.|+++++++|+|+.|+|..
T Consensus 139 ---~~------------~-------~~~----~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~ 192 (218)
T PF01738_consen 139 ---ED------------A-------PKI----KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFAN 192 (218)
T ss_dssp ---HH------------G-------GG------S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTS
T ss_pred ---hh------------h-------ccc----CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccC
Confidence 00 0 011 248999999999987654 6888899999999999999999999986
Q ss_pred CCC----chHHHHHHHHHHHHHhccC
Q 019193 323 LPN----NGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 323 ~~~----~~~~~~~~~~~~~fl~~~l 344 (344)
... ....+++++++++||+++|
T Consensus 193 ~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 193 PSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp TTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 532 2467889999999999987
No 16
>PLN02442 S-formylglutathione hydrolase
Probab=99.79 E-value=3.4e-17 Score=146.16 Aligned_cols=221 Identities=16% Similarity=0.144 Sum_probs=130.8
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhh-HHHHHHHHhhCCcEEEeeccCCCC-
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIY-DILCRRLVGTCKAVVVSVNYRRAP- 151 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~-~~~~~~la~~~g~~vv~~dyr~~p- 151 (344)
..+.+.+|.|... ..++. |+|+++||++. +...... ..+. .++...|++|+.+|.....
T Consensus 30 ~~~~~~vy~P~~~--------------~~~~~-Pvv~~lHG~~~---~~~~~~~~~~~~-~~~~~~g~~Vv~pd~~~~g~ 90 (283)
T PLN02442 30 CSMTFSVYFPPAS--------------DSGKV-PVLYWLSGLTC---TDENFIQKSGAQ-RAAAARGIALVAPDTSPRGL 90 (283)
T ss_pred CceEEEEEcCCcc--------------cCCCC-CEEEEecCCCc---ChHHHHHhhhHH-HHHhhcCeEEEecCCCCCCC
Confidence 4589999999843 13577 99999999552 2221111 1222 3444559999999964211
Q ss_pred ----C---------CC-C-----C-----chhhHH-HHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhccc
Q 019193 152 ----E---------NR-Y-----P-----CAYDDG-WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES 206 (344)
Q Consensus 152 ----~---------~~-~-----~-----~~~~D~-~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~ 206 (344)
+ .. | + ...+.+ .+...++.+... .+|++ +++|+|+|+||++|+.++.+.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~~~~-~~~i~G~S~GG~~a~~~a~~~p~- 166 (283)
T PLN02442 91 NVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD--QLDTS-RASIFGHSMGGHGALTIYLKNPD- 166 (283)
T ss_pred CCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHH--hcCCC-ceEEEEEChhHHHHHHHHHhCch-
Confidence 0 00 0 0 001111 223333333211 16788 99999999999999999998766
Q ss_pred CCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcC
Q 019193 207 EVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAG 286 (344)
Q Consensus 207 ~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~ 286 (344)
.++++++++|+.+...... . .. ....+++.... .....++..+. ..... ..+|++|+||+
T Consensus 167 --~~~~~~~~~~~~~~~~~~~-~----------~~----~~~~~~g~~~~-~~~~~d~~~~~-~~~~~-~~~pvli~~G~ 226 (283)
T PLN02442 167 --KYKSVSAFAPIANPINCPW-G----------QK----AFTNYLGSDKA-DWEEYDATELV-SKFND-VSATILIDQGE 226 (283)
T ss_pred --hEEEEEEECCccCcccCch-h----------hH----HHHHHcCCChh-hHHHcChhhhh-hhccc-cCCCEEEEECC
Confidence 6899999999876431100 0 00 01112211110 00111111110 01110 14589999999
Q ss_pred CCcChHH---HHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 287 LDLIQDW---QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 287 ~D~l~~~---~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
.|.+++. +..+.+++++.|.++++++++|.+|.|. .....+++.++|..++
T Consensus 227 ~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~------~~~~~i~~~~~~~~~~ 280 (283)
T PLN02442 227 ADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF------FIATFIDDHINHHAQA 280 (283)
T ss_pred CCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH------HHHHHHHHHHHHHHHH
Confidence 9988774 6789999999999999999999999874 2344555555665544
No 17
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.79 E-value=3e-19 Score=144.03 Aligned_cols=203 Identities=17% Similarity=0.197 Sum_probs=142.7
Q ss_pred CceEEEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcE
Q 019193 62 GVFSFDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV 141 (344)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~ 141 (344)
..+.+++.+..+....+++|.|... . |+.||+|||.|..|+... -...+ .-|.+.||.
T Consensus 42 i~r~e~l~Yg~~g~q~VDIwg~~~~------------------~-klfIfIHGGYW~~g~rk~--clsiv-~~a~~~gY~ 99 (270)
T KOG4627|consen 42 IIRVEHLRYGEGGRQLVDIWGSTNQ------------------A-KLFIFIHGGYWQEGDRKM--CLSIV-GPAVRRGYR 99 (270)
T ss_pred ccchhccccCCCCceEEEEecCCCC------------------c-cEEEEEecchhhcCchhc--ccchh-hhhhhcCeE
Confidence 4556677776656788999998654 2 899999999999887654 22333 334455999
Q ss_pred EEeeccCCCCCC-CCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 142 VVSVNYRRAPEN-RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 142 vv~~dyr~~p~~-~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
|++++|-++|+. .....+.|....++|+.+.-. +.+ .+.+.|||+|+|||+....+.++ ++|.|++++|+..
T Consensus 100 vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~----n~k-~l~~gGHSaGAHLa~qav~R~r~--prI~gl~l~~GvY 172 (270)
T KOG4627|consen 100 VASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTE----NTK-VLTFGGHSAGAHLAAQAVMRQRS--PRIWGLILLCGVY 172 (270)
T ss_pred EEEeccCcCcccccHHHHHHHHHHHHHHHHHhcc----cce-eEEEcccchHHHHHHHHHHHhcC--chHHHHHHHhhHh
Confidence 999999999997 677788999999999998643 445 89999999999999998887644 4899999999988
Q ss_pred CCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCC--cChHHHHHHH
Q 019193 221 GGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLD--LIQDWQLAYM 298 (344)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D--~l~~~~~~~~ 298 (344)
+.......+.- ..--+ ..+....+++ .....++..+ |+||+.|++| .++.+.+.|+
T Consensus 173 ~l~EL~~te~g--~dlgL----------------t~~~ae~~Sc---dl~~~~~v~~-~ilVv~~~~espklieQnrdf~ 230 (270)
T KOG4627|consen 173 DLRELSNTESG--NDLGL----------------TERNAESVSC---DLWEYTDVTV-WILVVAAEHESPKLIEQNRDFA 230 (270)
T ss_pred hHHHHhCCccc--cccCc----------------ccchhhhcCc---cHHHhcCcee-eeeEeeecccCcHHHHhhhhHH
Confidence 76543221110 00000 0011111222 1111222222 6999999999 4678889999
Q ss_pred HHHHHCCCCEEEEEeCCCceE
Q 019193 299 EGLKKAGQDVKLLYLEQATIG 319 (344)
Q Consensus 299 ~~L~~~g~~~~~~~~~g~~H~ 319 (344)
..+++ ..+..+++.+|-
T Consensus 231 ~q~~~----a~~~~f~n~~hy 247 (270)
T KOG4627|consen 231 DQLRK----ASFTLFKNYDHY 247 (270)
T ss_pred HHhhh----cceeecCCcchh
Confidence 98886 577889999993
No 18
>PRK10115 protease 2; Provisional
Probab=99.78 E-value=1.2e-17 Score=165.37 Aligned_cols=239 Identities=15% Similarity=0.117 Sum_probs=157.2
Q ss_pred CceEEEEEEeCCCC--eEEEE-eecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhC
Q 019193 62 GVFSFDVIVDRGTN--LLCRI-YRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTC 138 (344)
Q Consensus 62 ~~~~~~~~~~~~~~--~~~~~-~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~ 138 (344)
....+.+.+.+.++ +++.+ |.|... ..++. |+||++|||-..... ..|......|+++
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~--------------~~~~~-P~ll~~hGg~~~~~~---p~f~~~~~~l~~r- 473 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHF--------------RKGHN-PLLVYGYGSYGASID---ADFSFSRLSLLDR- 473 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCC--------------CCCCC-CEEEEEECCCCCCCC---CCccHHHHHHHHC-
Confidence 34667777766555 66644 445332 13467 999999997543222 2255666688888
Q ss_pred CcEEEeeccCCCCCCC-----------CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccC
Q 019193 139 KAVVVSVNYRRAPENR-----------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE 207 (344)
Q Consensus 139 g~~vv~~dyr~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~ 207 (344)
|++|+.+++|.+.+.. -...++|+.++.+|+.+++. +|++ |++++|.|+||.|+..++.+.++
T Consensus 474 G~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~---~d~~-rl~i~G~S~GG~l~~~~~~~~Pd-- 547 (686)
T PRK10115 474 GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGY---GSPS-LCYGMGGSAGGMLMGVAINQRPE-- 547 (686)
T ss_pred CcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCC---CChH-HeEEEEECHHHHHHHHHHhcChh--
Confidence 9999999999886642 12567999999999999876 8999 99999999999999998887666
Q ss_pred CeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCC-C---CCCCCCCCCCCCcCCCCCCcEEEE
Q 019193 208 VEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRD-H---PACNPFGPKGIDLVGVKFPKSLVV 283 (344)
Q Consensus 208 ~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~pP~li~ 283 (344)
.++++|+..|++|+...... ...+... . .+..| ++..+.. . ...+|+ ..++..+.|++||+
T Consensus 548 -lf~A~v~~vp~~D~~~~~~~----~~~p~~~-~----~~~e~-G~p~~~~~~~~l~~~SP~----~~v~~~~~P~lLi~ 612 (686)
T PRK10115 548 -LFHGVIAQVPFVDVVTTMLD----ESIPLTT-G----EFEEW-GNPQDPQYYEYMKSYSPY----DNVTAQAYPHLLVT 612 (686)
T ss_pred -heeEEEecCCchhHhhhccc----CCCCCCh-h----HHHHh-CCCCCHHHHHHHHHcCch----hccCccCCCceeEE
Confidence 69999999999986532100 0001100 0 11111 1000000 0 012333 22233336778999
Q ss_pred EcCCCcChH--HHHHHHHHHHHCCCCEEEEEe---CCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 284 VAGLDLIQD--WQLAYMEGLKKAGQDVKLLYL---EQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 284 ~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~---~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
||.+|.-++ ++.+++.+|++.|+++++.++ ++.+|+.. .+.....+.......||..
T Consensus 613 ~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~--~~r~~~~~~~A~~~aFl~~ 674 (686)
T PRK10115 613 TGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK--SGRFKSYEGVAMEYAFLIA 674 (686)
T ss_pred ecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC--cCHHHHHHHHHHHHHHHHH
Confidence 999997764 678999999999999888888 99999832 2222334444555666654
No 19
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=6.2e-17 Score=139.93 Aligned_cols=201 Identities=19% Similarity=0.146 Sum_probs=150.3
Q ss_pred EEEeCC-CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeec
Q 019193 68 VIVDRG-TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 68 ~~~~~~-~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d 146 (344)
++++.. ..+...+.+|.+. .+. |+||.+|+ +.|-... ....+++||.+ ||.|+.||
T Consensus 5 v~~~~~~~~~~~~~a~P~~~----------------~~~-P~VIv~he---i~Gl~~~--i~~~a~rlA~~-Gy~v~~Pd 61 (236)
T COG0412 5 VTIPAPDGELPAYLARPAGA----------------GGF-PGVIVLHE---IFGLNPH--IRDVARRLAKA-GYVVLAPD 61 (236)
T ss_pred eEeeCCCceEeEEEecCCcC----------------CCC-CEEEEEec---ccCCchH--HHHHHHHHHhC-CcEEEech
Confidence 344433 3578888888876 366 99999999 2333332 68899999998 99999999
Q ss_pred cCC--CCCC-----------------CCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccC
Q 019193 147 YRR--APEN-----------------RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE 207 (344)
Q Consensus 147 yr~--~p~~-----------------~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~ 207 (344)
.-. .+.. +......|+.++++|+..+.. ++++ +|.++|+|+||.+|+.++.+.+
T Consensus 62 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~---~~~~-~ig~~GfC~GG~~a~~~a~~~~--- 134 (236)
T COG0412 62 LYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQ---VDPK-RIGVVGFCMGGGLALLAATRAP--- 134 (236)
T ss_pred hhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCC---CCCc-eEEEEEEcccHHHHHHhhcccC---
Confidence 432 1111 112456899999999998865 7888 9999999999999999887754
Q ss_pred CeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCC
Q 019193 208 VEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGL 287 (344)
Q Consensus 208 ~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~ 287 (344)
.+++.+.++|..-..... . .... -.|+++.+|+.
T Consensus 135 -~v~a~v~fyg~~~~~~~~--------------------------------~---------~~~~----~~pvl~~~~~~ 168 (236)
T COG0412 135 -EVKAAVAFYGGLIADDTA--------------------------------D---------APKI----KVPVLLHLAGE 168 (236)
T ss_pred -CccEEEEecCCCCCCccc--------------------------------c---------cccc----cCcEEEEeccc
Confidence 489999999864211100 0 0111 23899999999
Q ss_pred CcChHH--HHHHHHHHHHCCCCEEEEEeCCCceEEEEC-------CCchHHHHHHHHHHHHHhccC
Q 019193 288 DLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFL-------PNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 288 D~l~~~--~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~-------~~~~~~~~~~~~~~~fl~~~l 344 (344)
|..++. ...+.+++.+.++.+++.+|+++.|+|... -+...+++.++++.+|++++|
T Consensus 169 D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 169 DPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred CCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 988764 478888899999999999999999999853 123567899999999999875
No 20
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.77 E-value=1.2e-16 Score=148.55 Aligned_cols=220 Identities=16% Similarity=0.146 Sum_probs=128.7
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC--------CCchhhHHHHHHHHHHhcccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR--------YPCAYDDGWTVLKWAKSRSWL 175 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~--------~~~~~~D~~~a~~~l~~~~~~ 175 (344)
+. |+||++||.+- + ...|..++..|+++ ||.|+++|+|...... +....+|+.++++++...
T Consensus 135 ~~-~~Vl~lHG~~~---~--~~~~~~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~--- 204 (395)
T PLN02652 135 MR-GILIIIHGLNE---H--SGRYLHFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSE--- 204 (395)
T ss_pred Cc-eEEEEECCchH---H--HHHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHh---
Confidence 56 89999999542 2 22367888899887 9999999999654322 123457888888888754
Q ss_pred cCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhh--------hCCCCc-------cCH
Q 019193 176 QSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKR--------LDGKYF-------VTV 240 (344)
Q Consensus 176 ~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~--------~~~~~~-------~~~ 240 (344)
.+.. +++|+|||+||.+++.++.. ++...+++++|+.+|++......+.... .....+ ...
T Consensus 205 --~~~~-~i~lvGhSmGG~ial~~a~~-p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~ 280 (395)
T PLN02652 205 --NPGV-PCFLFGHSTGGAVVLKAASY-PSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPV 280 (395)
T ss_pred --CCCC-CEEEEEECHHHHHHHHHHhc-cCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCc
Confidence 2234 79999999999999977643 3222369999999999765432110000 000000 000
Q ss_pred -HhHHHHHHHhCCCCCCCCCCC-CC----CC---CCCCCCcCCCCCCcEEEEEcCCCcChHH--HHHHHHHHHHCCCCEE
Q 019193 241 -QDRDWYWRAYLPEGANRDHPA-CN----PF---GPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVK 309 (344)
Q Consensus 241 -~~~~~~~~~~~~~~~~~~~~~-~~----~~---~~~~~~~~~~~~pP~li~~G~~D~l~~~--~~~~~~~L~~~g~~~~ 309 (344)
.........+.. ........ .. .. ......+..+ ..|+||+||++|.+++. ++.+++++ .+.+++
T Consensus 281 s~~~~~~~~~~~d-p~~~~g~i~~~~~~~~~~~~~~l~~~L~~I-~vPvLIi~G~~D~vvp~~~a~~l~~~~--~~~~k~ 356 (395)
T PLN02652 281 SRDPAALLAKYSD-PLVYTGPIRVRTGHEILRISSYLTRNFKSV-TVPFMVLHGTADRVTDPLASQDLYNEA--ASRHKD 356 (395)
T ss_pred CCCHHHHHHHhcC-CCcccCCchHHHHHHHHHHHHHHHhhcccC-CCCEEEEEeCCCCCCCHHHHHHHHHhc--CCCCce
Confidence 000011111100 00000000 00 00 0000111111 34899999999999864 23333333 234578
Q ss_pred EEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 310 LLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 310 ~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
+++|+|+.|.....+ ..+++++++.+||++++
T Consensus 357 l~~~~ga~H~l~~e~---~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 357 IKLYDGFLHDLLFEP---EREEVGRDIIDWMEKRL 388 (395)
T ss_pred EEEECCCeEEeccCC---CHHHHHHHHHHHHHHHh
Confidence 899999999876543 47889999999998764
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=99.77 E-value=3.2e-17 Score=146.08 Aligned_cols=231 Identities=15% Similarity=0.143 Sum_probs=136.2
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCC
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN 153 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~ 153 (344)
..+.+++|.|.+. +. ++|+++||.+. +. ..|..++..|+++ |+.|+++|+|.....
T Consensus 11 ~~l~~~~~~~~~~-----------------~~-~~v~llHG~~~---~~--~~~~~~~~~l~~~-g~~via~D~~G~G~S 66 (276)
T PHA02857 11 DYIYCKYWKPITY-----------------PK-ALVFISHGAGE---HS--GRYEELAENISSL-GILVFSHDHIGHGRS 66 (276)
T ss_pred CEEEEEeccCCCC-----------------CC-EEEEEeCCCcc---cc--chHHHHHHHHHhC-CCEEEEccCCCCCCC
Confidence 3488888888532 55 88999999542 22 2378889999887 999999999965432
Q ss_pred C-----CC---chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCC
Q 019193 154 R-----YP---CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQER 225 (344)
Q Consensus 154 ~-----~~---~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~ 225 (344)
. .. ..++|+.+.+.++.+. .... +++|+|||+||.+|+.++.+.++ .++++|+++|+......
T Consensus 67 ~~~~~~~~~~~~~~~d~~~~l~~~~~~-----~~~~-~~~lvG~S~GG~ia~~~a~~~p~---~i~~lil~~p~~~~~~~ 137 (276)
T PHA02857 67 NGEKMMIDDFGVYVRDVVQHVVTIKST-----YPGV-PVFLLGHSMGATISILAAYKNPN---LFTAMILMSPLVNAEAV 137 (276)
T ss_pred CCccCCcCCHHHHHHHHHHHHHHHHhh-----CCCC-CEEEEEcCchHHHHHHHHHhCcc---ccceEEEeccccccccc
Confidence 2 11 2346666777666543 2335 89999999999999999987655 58999999998753221
Q ss_pred Chhh-------hhhCCCCcc---CHH----hHHHHHHHhCCCCCCCCCCCCC----CC---C-CCCCCcCCCCCCcEEEE
Q 019193 226 TESE-------KRLDGKYFV---TVQ----DRDWYWRAYLPEGANRDHPACN----PF---G-PKGIDLVGVKFPKSLVV 283 (344)
Q Consensus 226 ~~~~-------~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~----~~---~-~~~~~~~~~~~pP~li~ 283 (344)
.... ......... ... ....... +..+.......... .. . .....+..+ ..|++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvliv 215 (276)
T PHA02857 138 PRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYK-YQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKI-KTPILIL 215 (276)
T ss_pred cHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHH-HhcCCCccCCCccHHHHHHHHHHHHHHHHhcccC-CCCEEEE
Confidence 0000 000000000 000 0000000 00000000000000 00 0 000011111 3489999
Q ss_pred EcCCCcChHHH--HHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 284 VAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 284 ~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
+|++|.+++.. ..+.+++ +.++++.++++++|...... .+..+++++++.+||.++
T Consensus 216 ~G~~D~i~~~~~~~~l~~~~---~~~~~~~~~~~~gH~~~~e~-~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 216 QGTNNEISDVSGAYYFMQHA---NCNREIKIYEGAKHHLHKET-DEVKKSVMKEIETWIFNR 273 (276)
T ss_pred ecCCCCcCChHHHHHHHHHc---cCCceEEEeCCCcccccCCc-hhHHHHHHHHHHHHHHHh
Confidence 99999987643 3333333 33689999999999876542 245788999999999864
No 22
>PRK10749 lysophospholipase L2; Provisional
Probab=99.76 E-value=9.2e-17 Score=146.83 Aligned_cols=220 Identities=18% Similarity=0.130 Sum_probs=131.2
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC-------------CCchhhHHHHHHHHHHhcc
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-------------YPCAYDDGWTVLKWAKSRS 173 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-------------~~~~~~D~~~a~~~l~~~~ 173 (344)
++||++||.+ ++ ...|..++..++++ |+.|+++|+|...... +....+|+.++++.+...
T Consensus 55 ~~vll~HG~~---~~--~~~y~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~- 127 (330)
T PRK10749 55 RVVVICPGRI---ES--YVKYAELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP- 127 (330)
T ss_pred cEEEEECCcc---ch--HHHHHHHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc-
Confidence 8899999943 12 22377888888877 9999999999654322 223345666666554433
Q ss_pred cccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhh---------hhhC----------C
Q 019193 174 WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESE---------KRLD----------G 234 (344)
Q Consensus 174 ~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~---------~~~~----------~ 234 (344)
.+.. +++++||||||.+|+.++.+.++ .++++|+++|........+.. .... .
T Consensus 128 ----~~~~-~~~l~GhSmGG~ia~~~a~~~p~---~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (330)
T PRK10749 128 ----GPYR-KRYALAHSMGGAILTLFLQRHPG---VFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTG 199 (330)
T ss_pred ----CCCC-CeEEEEEcHHHHHHHHHHHhCCC---CcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCC
Confidence 2345 89999999999999999887665 689999999976532211100 0000 0
Q ss_pred ----CCc----c--CHHhHHHHHHHhCCCCCCCC-CCCC----CCCC---CCCCCcCCCCCCcEEEEEcCCCcChHH--H
Q 019193 235 ----KYF----V--TVQDRDWYWRAYLPEGANRD-HPAC----NPFG---PKGIDLVGVKFPKSLVVVAGLDLIQDW--Q 294 (344)
Q Consensus 235 ----~~~----~--~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~---~~~~~~~~~~~pP~li~~G~~D~l~~~--~ 294 (344)
.++ + .....+...+.+........ .... ..+. ......... ..|+||++|+.|.+++. +
T Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~Lii~G~~D~vv~~~~~ 278 (330)
T PRK10749 200 RWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDI-TTPLLLLQAEEERVVDNRMH 278 (330)
T ss_pred CCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCC-CCCEEEEEeCCCeeeCHHHH
Confidence 000 0 01111112222211100000 0000 0000 000011111 34899999999988764 4
Q ss_pred HHHHHHHHHCC---CCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 295 LAYMEGLKKAG---QDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 295 ~~~~~~L~~~g---~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
+.++++++.++ .++++++|+|++|......+ ...+++++++.+||+++
T Consensus 279 ~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~-~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 279 DRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD-AMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc-HHHHHHHHHHHHHHhhc
Confidence 67778887665 35689999999998765532 34788999999999875
No 23
>PRK13604 luxD acyl transferase; Provisional
Probab=99.76 E-value=2.4e-17 Score=145.41 Aligned_cols=190 Identities=12% Similarity=0.061 Sum_probs=117.4
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC-CCC-------CCCchhhHHHHHHHHHHhccc
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA-PEN-------RYPCAYDDGWTVLKWAKSRSW 174 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~-p~~-------~~~~~~~D~~~a~~~l~~~~~ 174 (344)
.+. ++||++||-+ +.. ..|..+++.|+++ |+.|+.+|+|.. .+. .+.....|+.++++|+++.
T Consensus 35 ~~~-~~vIi~HGf~---~~~--~~~~~~A~~La~~-G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-- 105 (307)
T PRK13604 35 KKN-NTILIASGFA---RRM--DHFAGLAEYLSSN-GFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-- 105 (307)
T ss_pred CCC-CEEEEeCCCC---CCh--HHHHHHHHHHHHC-CCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc--
Confidence 466 9999999933 222 2378899999988 999999998753 332 2334679999999999875
Q ss_pred ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhh--CCCCccCH---------Hh-
Q 019193 175 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRL--DGKYFVTV---------QD- 242 (344)
Q Consensus 175 ~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~--~~~~~~~~---------~~- 242 (344)
+.+ +|+|.||||||.+|+.+|... +++++|+.||+.++.......... ...++... ..
T Consensus 106 ----~~~-~I~LiG~SmGgava~~~A~~~-----~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~ 175 (307)
T PRK13604 106 ----GIN-NLGLIAASLSARIAYEVINEI-----DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLG 175 (307)
T ss_pred ----CCC-ceEEEEECHHHHHHHHHhcCC-----CCCEEEEcCCcccHHHHHHHhhhcccccCccccccccccccccccc
Confidence 235 899999999999987666421 489999999998854221110000 00001000 00
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHH--HHHHHHHHHCCCCEEEEEeCCCceEE
Q 019193 243 RDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGF 320 (344)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~g~~H~f 320 (344)
...+......-+. ....++. ...+.+ .-|+|++||+.|.+++.. +.+.++++. .+.++++++|+.|.|
T Consensus 176 ~~~f~~~~~~~~~---~~~~s~i----~~~~~l-~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl~~i~Ga~H~l 245 (307)
T PRK13604 176 SEVFVTDCFKHGW---DTLDSTI----NKMKGL-DIPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKLYSLIGSSHDL 245 (307)
T ss_pred HHHHHHHHHhcCc---cccccHH----HHHhhc-CCCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEEEEeCCCcccc
Confidence 0112211100000 0111221 111111 138999999999988753 455554332 578999999999988
Q ss_pred E
Q 019193 321 Y 321 (344)
Q Consensus 321 ~ 321 (344)
.
T Consensus 246 ~ 246 (307)
T PRK13604 246 G 246 (307)
T ss_pred C
Confidence 5
No 24
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.75 E-value=2.5e-16 Score=141.05 Aligned_cols=222 Identities=18% Similarity=0.112 Sum_probs=134.8
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC-----CCchhhHHHHHHHHHHhcccccCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-----YPCAYDDGWTVLKWAKSRSWLQSK 178 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----~~~~~~D~~~a~~~l~~~~~~~~~ 178 (344)
+. .+||.+||.+-.. ..|..++..|+.+ ||.|+..|.|...... .....+|....++.+.+.....
T Consensus 33 ~~-g~Vvl~HG~~Eh~-----~ry~~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~-- 103 (298)
T COG2267 33 PK-GVVVLVHGLGEHS-----GRYEELADDLAAR-GFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEP-- 103 (298)
T ss_pred CC-cEEEEecCchHHH-----HHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhcc--
Confidence 44 8999999976432 3378889999988 9999999999644332 2222344444444444332211
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCC--CChhhhhhC---------CCCccC--------
Q 019193 179 DSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE--RTESEKRLD---------GKYFVT-------- 239 (344)
Q Consensus 179 d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~--~~~~~~~~~---------~~~~~~-------- 239 (344)
+++.+++|+||||||.+|+..+.+... +++++|+.+|++.... ......... ...+..
T Consensus 104 ~~~~p~~l~gHSmGg~Ia~~~~~~~~~---~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 180 (298)
T COG2267 104 DPGLPVFLLGHSMGGLIALLYLARYPP---RIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLT 180 (298)
T ss_pred CCCCCeEEEEeCcHHHHHHHHHHhCCc---cccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccccCcCc
Confidence 222389999999999999999988764 7999999999998763 100000000 000000
Q ss_pred --HHhHHHHHHHhCCCCCCCCCCCCCCCC------------CCCCCcCC-CC-CCcEEEEEcCCCcChHHHHHHHHHHHH
Q 019193 240 --VQDRDWYWRAYLPEGANRDHPACNPFG------------PKGIDLVG-VK-FPKSLVVVAGLDLIQDWQLAYMEGLKK 303 (344)
Q Consensus 240 --~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~-~~-~pP~li~~G~~D~l~~~~~~~~~~L~~ 303 (344)
........+.|. .+|.+..-. ........ .. .-|++|++|+.|.+++......+..+.
T Consensus 181 ~~~sr~~~~~~~~~------~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~ 254 (298)
T COG2267 181 DDLSRDPAEVAAYE------ADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFER 254 (298)
T ss_pred chhhcCHHHHHHHh------cCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHh
Confidence 000111122221 112111000 00001111 11 338999999999988732344556666
Q ss_pred CCCC-EEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 304 AGQD-VKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 304 ~g~~-~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
.+.+ +++++|+|+.|.....++.. .+++++++.+|+.+++
T Consensus 255 ~~~~~~~~~~~~g~~He~~~E~~~~-r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 255 AGSPDKELKVIPGAYHELLNEPDRA-REEVLKDILAWLAEAL 295 (298)
T ss_pred cCCCCceEEecCCcchhhhcCcchH-HHHHHHHHHHHHHhhc
Confidence 6654 79999999999988776522 2889999999998763
No 25
>PRK11460 putative hydrolase; Provisional
Probab=99.74 E-value=7.7e-17 Score=139.68 Aligned_cols=177 Identities=15% Similarity=0.101 Sum_probs=113.5
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhC-CcEEEeeccCCC----CCCCC--------CchhhHHHH----H
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTC-KAVVVSVNYRRA----PENRY--------PCAYDDGWT----V 165 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~-g~~vv~~dyr~~----p~~~~--------~~~~~D~~~----a 165 (344)
++. |+||++||.| ++... +..++..|++.. .+.+++++-+.. +...+ ....+++.+ .
T Consensus 14 ~~~-~~vIlLHG~G---~~~~~--~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l 87 (232)
T PRK11460 14 PAQ-QLLLLFHGVG---DNPVA--MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTF 87 (232)
T ss_pred CCC-cEEEEEeCCC---CChHH--HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHH
Confidence 456 9999999955 23322 567788887652 345665553211 01000 111122222 2
Q ss_pred HHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHH
Q 019193 166 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDW 245 (344)
Q Consensus 166 ~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (344)
.+++.....+++++++ +|+|+|+|+||.+|+.++.+.++ .+.+++.+++.+...
T Consensus 88 ~~~i~~~~~~~~~~~~-~i~l~GfS~Gg~~al~~a~~~~~---~~~~vv~~sg~~~~~---------------------- 141 (232)
T PRK11460 88 IETVRYWQQQSGVGAS-ATALIGFSQGAIMALEAVKAEPG---LAGRVIAFSGRYASL---------------------- 141 (232)
T ss_pred HHHHHHHHHhcCCChh-hEEEEEECHHHHHHHHHHHhCCC---cceEEEEeccccccc----------------------
Confidence 2233222233458888 99999999999999998876543 456677777643100
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEEEeCCCceEEEEC
Q 019193 246 YWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGFYFL 323 (344)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~ 323 (344)
+ .. .. ..+|++++||+.|.+++ .+.++.++|++.|.+++++.|++++|.+
T Consensus 142 ------~--------~~-------~~----~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i--- 193 (232)
T PRK11460 142 ------P--------ET-------AP----TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI--- 193 (232)
T ss_pred ------c--------cc-------cc----CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC---
Confidence 0 00 00 03489999999999876 5688999999999999999999999987
Q ss_pred CCchHHHHHHHHHHHHHhccC
Q 019193 324 PNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~fl~~~l 344 (344)
..+.++++.+||.+.|
T Consensus 194 -----~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 194 -----DPRLMQFALDRLRYTV 209 (232)
T ss_pred -----CHHHHHHHHHHHHHHc
Confidence 3356777777777653
No 26
>PLN00021 chlorophyllase
Probab=99.74 E-value=4.6e-16 Score=139.97 Aligned_cols=190 Identities=19% Similarity=0.226 Sum_probs=127.9
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCC-CCC
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR-APE 152 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~-~p~ 152 (344)
..+++.+|.|... .+. |+|||+||+++. . ..|..+++.|+++ |+.|+++|++. .+.
T Consensus 37 ~~~p~~v~~P~~~----------------g~~-PvVv~lHG~~~~---~--~~y~~l~~~Las~-G~~VvapD~~g~~~~ 93 (313)
T PLN00021 37 PPKPLLVATPSEA----------------GTY-PVLLFLHGYLLY---N--SFYSQLLQHIASH-GFIVVAPQLYTLAGP 93 (313)
T ss_pred CCceEEEEeCCCC----------------CCC-CEEEEECCCCCC---c--ccHHHHHHHHHhC-CCEEEEecCCCcCCC
Confidence 4688999999754 467 999999997742 2 2378889999987 99999999664 333
Q ss_pred CCCCchhhHHHHHHHHHHhcccc-----cCCCCCCeEEEeeCCchHHHHHHHHHHhcccC--CeeeEEEEeccccCCCCC
Q 019193 153 NRYPCAYDDGWTVLKWAKSRSWL-----QSKDSKAHIYLAGDSSGGNIVHHVALRAVESE--VEILGNILLNPMFGGQER 225 (344)
Q Consensus 153 ~~~~~~~~D~~~a~~~l~~~~~~-----~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~--~~i~~~il~~p~~~~~~~ 225 (344)
.....++|+.++++|+.+.... ...|.+ +++|+|||+||.+|+.++...++.. .+++++++++|+......
T Consensus 94 -~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~-~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~ 171 (313)
T PLN00021 94 -DGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLS-KLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKG 171 (313)
T ss_pred -CchhhHHHHHHHHHHHHhhhhhhcccccccChh-heEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccc
Confidence 3345678889999999864221 226778 9999999999999999998865432 468999999998643211
Q ss_pred ChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCc-----C----hHHHHH
Q 019193 226 TESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDL-----I----QDWQLA 296 (344)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~-----l----~~~~~~ 296 (344)
.. ..+....+.+...++ ..|++|++++.|. + .+....
T Consensus 172 ~~------------------------------~~p~il~~~~~s~~~----~~P~liig~g~~~~~~~~~~p~~ap~~~~ 217 (313)
T PLN00021 172 KQ------------------------------TPPPVLTYAPHSFNL----DIPVLVIGTGLGGEPRNPLFPPCAPDGVN 217 (313)
T ss_pred cC------------------------------CCCcccccCcccccC----CCCeEEEecCCCcccccccccccCCCCCC
Confidence 00 000000000011111 2379999998763 2 223333
Q ss_pred HHHHHHHCCCCEEEEEeCCCceEEEE
Q 019193 297 YMEGLKKAGQDVKLLYLEQATIGFYF 322 (344)
Q Consensus 297 ~~~~L~~~g~~~~~~~~~g~~H~f~~ 322 (344)
..+-..+.+.+..+.+.++++|.-.+
T Consensus 218 ~~~f~~~~~~~~~~~~~~~~gH~~~~ 243 (313)
T PLN00021 218 HAEFFNECKAPAVHFVAKDYGHMDML 243 (313)
T ss_pred HHHHHHhcCCCeeeeeecCCCcceee
Confidence 33445566668899999999997553
No 27
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.71 E-value=3e-16 Score=134.67 Aligned_cols=116 Identities=20% Similarity=0.235 Sum_probs=82.2
Q ss_pred ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCC
Q 019193 175 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEG 254 (344)
Q Consensus 175 ~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..+++++ ||+|+|+|.||.+|+.++.+.+. ++.|++.+++++-......
T Consensus 99 ~~~i~~~-ri~l~GFSQGa~~al~~~l~~p~---~~~gvv~lsG~~~~~~~~~--------------------------- 147 (216)
T PF02230_consen 99 AYGIDPS-RIFLGGFSQGAAMALYLALRYPE---PLAGVVALSGYLPPESELE--------------------------- 147 (216)
T ss_dssp HTT--GG-GEEEEEETHHHHHHHHHHHCTSS---TSSEEEEES---TTGCCCH---------------------------
T ss_pred HcCCChh-heehhhhhhHHHHHHHHHHHcCc---CcCEEEEeecccccccccc---------------------------
Confidence 3458999 99999999999999999998766 6999999999864322110
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHH
Q 019193 255 ANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTV 332 (344)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~ 332 (344)
. ......-.|++++||+.|++++ .++...+.|++.+.+++++.|+|++|.. ..+.
T Consensus 148 -----~----------~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~ 204 (216)
T PF02230_consen 148 -----D----------RPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEE 204 (216)
T ss_dssp -----C----------CHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHH
T ss_pred -----c----------cccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHH
Confidence 0 0000002389999999999876 4688899999999999999999999966 4568
Q ss_pred HHHHHHHHhccC
Q 019193 333 MDEISNFVSCNY 344 (344)
Q Consensus 333 ~~~~~~fl~~~l 344 (344)
++++.+||++++
T Consensus 205 ~~~~~~~l~~~~ 216 (216)
T PF02230_consen 205 LRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHhhhC
Confidence 899999999864
No 28
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.69 E-value=9.7e-17 Score=146.84 Aligned_cols=130 Identities=25% Similarity=0.344 Sum_probs=101.6
Q ss_pred CCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCC
Q 019193 72 RGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP 151 (344)
Q Consensus 72 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p 151 (344)
+.+++.++||.|... .++. |||||||||||..|+.....|+. ..|+++-+++||++||||.+
T Consensus 76 sEDCL~LNIwaP~~~---------------a~~~-PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~ 137 (491)
T COG2272 76 SEDCLYLNIWAPEVP---------------AEKL-PVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGA 137 (491)
T ss_pred cccceeEEeeccCCC---------------CCCC-cEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCccccc
Confidence 456799999999822 3567 99999999999999988765654 57888844999999999764
Q ss_pred CCC-------------CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 152 ENR-------------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 152 ~~~-------------~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
..- ---.+.|+..|++|+++|.+.+|.||+ +|.|+|+|+||..++.+... +.....+..+|+.||
T Consensus 138 lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~-NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg 215 (491)
T COG2272 138 LGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQ-NVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSG 215 (491)
T ss_pred ceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCcc-ceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCC
Confidence 311 013679999999999999999999999 99999999999998876554 222223455567776
Q ss_pred ccC
Q 019193 219 MFG 221 (344)
Q Consensus 219 ~~~ 221 (344)
...
T Consensus 216 ~~~ 218 (491)
T COG2272 216 AAS 218 (491)
T ss_pred CCC
Confidence 654
No 29
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.69 E-value=1.6e-15 Score=129.85 Aligned_cols=172 Identities=13% Similarity=0.038 Sum_probs=103.5
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC-------------CCCCchhhHHHHHHHHH
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE-------------NRYPCAYDDGWTVLKWA 169 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~-------------~~~~~~~~D~~~a~~~l 169 (344)
++. |+||++||+|........ ... ...++++.|++|+++||+.... ........|+...++++
T Consensus 11 ~~~-P~vv~lHG~~~~~~~~~~--~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 86 (212)
T TIGR01840 11 GPR-ALVLALHGCGQTASAYVI--DWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAV 86 (212)
T ss_pred CCC-CEEEEeCCCCCCHHHHhh--hcC-hHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHH
Confidence 467 999999998753211100 001 3456666799999999986321 01123456778888888
Q ss_pred HhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHH
Q 019193 170 KSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRA 249 (344)
Q Consensus 170 ~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
.++ +++|++ ||+|+|+|+||.+|+.++.+.++ .+++++.+++........... .... .........+.+.
T Consensus 87 ~~~---~~id~~-~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~~~~~g~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~ 156 (212)
T TIGR01840 87 KAN---YSIDPN-RVYVTGLSAGGGMTAVLGCTYPD---VFAGGASNAGLPYGEASSSIS-ATPQ--MCTAATAASVCRL 156 (212)
T ss_pred HHh---cCcChh-heEEEEECHHHHHHHHHHHhCch---hheEEEeecCCcccccccchh-hHhh--cCCCCCHHHHHHH
Confidence 775 348999 99999999999999999988765 588888888764321111000 0000 0000011111111
Q ss_pred hCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHC
Q 019193 250 YLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKA 304 (344)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~ 304 (344)
.... . .. .....||++|+||++|.+++ .++.+.+++++.
T Consensus 157 ~~~~--------~-------~~-~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 157 VRGM--------Q-------SE-YNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred Hhcc--------C-------Cc-ccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 1000 0 00 01116789999999998875 567888888875
No 30
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.68 E-value=8.9e-17 Score=154.98 Aligned_cols=130 Identities=23% Similarity=0.312 Sum_probs=100.4
Q ss_pred CCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCC-cEEEeeccCCC
Q 019193 72 RGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK-AVVVSVNYRRA 150 (344)
Q Consensus 72 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g-~~vv~~dyr~~ 150 (344)
+.+++.++||.|.... ..++. |+|||||||||..|+.... ....++.+.+ ++||+++||+.
T Consensus 75 sEdcl~l~i~~p~~~~-------------~~~~~-pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg 136 (493)
T cd00312 75 SEDCLYLNVYTPKNTK-------------PGNSL-PVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLG 136 (493)
T ss_pred CCcCCeEEEEeCCCCC-------------CCCCC-CEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEeccccc
Confidence 4577999999997541 13567 9999999999999887652 2345665545 99999999986
Q ss_pred CCC---------CCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 151 PEN---------RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 151 p~~---------~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
+.. +....+.|+..|++|++++...++.|++ +|.|+|+|+||+++..++..... ...++++|+.|+...
T Consensus 137 ~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~-~v~~~G~SaG~~~~~~~~~~~~~-~~lf~~~i~~sg~~~ 214 (493)
T cd00312 137 VLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPD-SVTIFGESAGGASVSLLLLSPDS-KGLFHRAISQSGSAL 214 (493)
T ss_pred ccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcc-eEEEEeecHHHHHhhhHhhCcch-hHHHHHHhhhcCCcc
Confidence 532 2335689999999999999999999999 99999999999999887765322 224677777776543
No 31
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=4.2e-15 Score=147.81 Aligned_cols=233 Identities=15% Similarity=0.145 Sum_probs=158.3
Q ss_pred EEEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEe
Q 019193 65 SFDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVS 144 (344)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~ 144 (344)
.+.+.+ ++-...+.+..|++.. +.++. |+++..|||.... .........+...++...|++|+.
T Consensus 500 ~~~i~~-~~~~~~~~~~lP~~~~-------------~~~ky-Pllv~~yGGP~sq-~v~~~~~~~~~~~~~s~~g~~v~~ 563 (755)
T KOG2100|consen 500 FGKIEI-DGITANAILILPPNFD-------------PSKKY-PLLVVVYGGPGSQ-SVTSKFSVDWNEVVVSSRGFAVLQ 563 (755)
T ss_pred eEEEEe-ccEEEEEEEecCCCCC-------------CCCCC-CEEEEecCCCCcc-eeeeeEEecHHHHhhccCCeEEEE
Confidence 344444 2233566778887762 34578 9999999987411 111111234455566667999999
Q ss_pred eccCCCCCCCC-----------CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEE
Q 019193 145 VNYRRAPENRY-----------PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGN 213 (344)
Q Consensus 145 ~dyr~~p~~~~-----------~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~ 213 (344)
+|+|.++.... ...++|+..+++++.++.. +|.+ ||+|+|+|.||.+++.+....+. .-+++.
T Consensus 564 vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~---iD~~-ri~i~GwSyGGy~t~~~l~~~~~--~~fkcg 637 (755)
T KOG2100|consen 564 VDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPF---IDRS-RVAIWGWSYGGYLTLKLLESDPG--DVFKCG 637 (755)
T ss_pred EcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhccc---ccHH-HeEEeccChHHHHHHHHhhhCcC--ceEEEE
Confidence 99997754321 2456899999999999874 9999 99999999999999998877542 268888
Q ss_pred EEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCC--CCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcCh
Q 019193 214 ILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLP--EGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQ 291 (344)
Q Consensus 214 il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~ 291 (344)
+.++|+++......... +.|.+ ..........++. ......+.|..|++||+.|..+
T Consensus 638 vavaPVtd~~~yds~~t-----------------erymg~p~~~~~~y~e~~~~----~~~~~~~~~~~LliHGt~DdnV 696 (755)
T KOG2100|consen 638 VAVAPVTDWLYYDSTYT-----------------ERYMGLPSENDKGYEESSVS----SPANNIKTPKLLLIHGTEDDNV 696 (755)
T ss_pred EEecceeeeeeeccccc-----------------HhhcCCCccccchhhhcccc----chhhhhccCCEEEEEcCCcCCc
Confidence 99999998763221110 01111 0111001111221 1122223556899999999776
Q ss_pred --HHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 292 --DWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 292 --~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
.++..+.++|+.+|++.++.+||+..|++..-. .....+..+..|+...
T Consensus 697 h~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~---~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 697 HFQQSAILIKALQNAGVPFRLLVYPDENHGISYVE---VISHLYEKLDRFLRDC 747 (755)
T ss_pred CHHHHHHHHHHHHHCCCceEEEEeCCCCccccccc---chHHHHHHHHHHHHHH
Confidence 677999999999999999999999999986432 2467888999999754
No 32
>COG0400 Predicted esterase [General function prediction only]
Probab=99.67 E-value=1.7e-15 Score=127.08 Aligned_cols=175 Identities=19% Similarity=0.166 Sum_probs=123.1
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccC-----------CCCCCCCC--chhhHHHHHHHHH
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR-----------RAPENRYP--CAYDDGWTVLKWA 169 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr-----------~~p~~~~~--~~~~D~~~a~~~l 169 (344)
+.. |+||++||-| |+... +..+...+.- ++.++++.=+ ...+..|. +...+.....+++
T Consensus 16 p~~-~~iilLHG~G---gde~~--~~~~~~~~~P--~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 16 PAA-PLLILLHGLG---GDELD--LVPLPELILP--NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCC-cEEEEEecCC---CChhh--hhhhhhhcCC--CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 355 8999999955 23322 3344434433 4666666422 12222332 2234555566667
Q ss_pred HhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHH
Q 019193 170 KSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRA 249 (344)
Q Consensus 170 ~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
.+....+++|.+ |+++.|+|.||++|+.+..+.+. .++++++++|++-....
T Consensus 88 ~~~~~~~gi~~~-~ii~~GfSqGA~ial~~~l~~~~---~~~~ail~~g~~~~~~~------------------------ 139 (207)
T COG0400 88 EELAEEYGIDSS-RIILIGFSQGANIALSLGLTLPG---LFAGAILFSGMLPLEPE------------------------ 139 (207)
T ss_pred HHHHHHhCCChh-heEEEecChHHHHHHHHHHhCch---hhccchhcCCcCCCCCc------------------------
Confidence 777777889999 99999999999999999998876 68999999997632110
Q ss_pred hCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCch
Q 019193 250 YLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNG 327 (344)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~ 327 (344)
. ...++..|+|++||+.|++++ .+.++.+.|++.|.+++...++ ++|..
T Consensus 140 ------------~---------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i------- 190 (207)
T COG0400 140 ------------L---------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEI------- 190 (207)
T ss_pred ------------c---------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcC-------
Confidence 0 011124589999999999865 5688899999999999999999 79976
Q ss_pred HHHHHHHHHHHHHhcc
Q 019193 328 HFYTVMDEISNFVSCN 343 (344)
Q Consensus 328 ~~~~~~~~~~~fl~~~ 343 (344)
..+.++++.+|+.+.
T Consensus 191 -~~e~~~~~~~wl~~~ 205 (207)
T COG0400 191 -PPEELEAARSWLANT 205 (207)
T ss_pred -CHHHHHHHHHHHHhc
Confidence 455777888898764
No 33
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.67 E-value=2.1e-16 Score=153.92 Aligned_cols=130 Identities=26% Similarity=0.366 Sum_probs=93.1
Q ss_pred CCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC-
Q 019193 72 RGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA- 150 (344)
Q Consensus 72 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~- 150 (344)
+.+++.+.||.|.... ...++ ||+||||||||..|+.....+.. ...++.+ +++||.++||+.
T Consensus 105 sEDCL~LnI~~P~~~~-------------~~~~l-PV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~-~vivVt~nYRlg~ 168 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNAS-------------SNSKL-PVMVWIHGGGFMFGSGSFPPYDG-ASLAASK-DVIVVTINYRLGA 168 (535)
T ss_dssp ES---EEEEEEETSSS-------------STTSE-EEEEEE--STTTSSCTTSGGGHT-HHHHHHH-TSEEEEE----HH
T ss_pred CchHHHHhhhhccccc-------------ccccc-ceEEEeecccccCCCcccccccc-cccccCC-CEEEEEecccccc
Confidence 3467999999999872 22378 99999999999999884332332 2334455 999999999963
Q ss_pred ------CCCC---CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 151 ------PENR---YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 151 ------p~~~---~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
++.. .-.++.|...|++|++++...+|.||+ +|.|+|+|+||..+..+... +.....+..+|+.|+.
T Consensus 169 ~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 169 FGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPD-NVTLFGQSAGAASVSLLLLS-PSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEEES--
T ss_pred cccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCc-ceeeeeecccccccceeeec-cccccccccccccccc
Confidence 2322 345789999999999999999999999 99999999999999887776 3334478999999984
No 34
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=2.9e-15 Score=126.52 Aligned_cols=184 Identities=20% Similarity=0.262 Sum_probs=126.1
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC---CCCC-chhhHHHHHHHHHHhcccccCCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE---NRYP-CAYDDGWTVLKWAKSRSWLQSKD 179 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~---~~~~-~~~~D~~~a~~~l~~~~~~~~~d 179 (344)
.. ++++|.||-..-.| . ...++..+..+.++.|+++||+.... .+-. ...+|+.++++|+++.. | .
T Consensus 59 ~~-~~lly~hGNa~Dlg---q--~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~---g-~ 128 (258)
T KOG1552|consen 59 AH-PTLLYSHGNAADLG---Q--MVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRY---G-S 128 (258)
T ss_pred cc-eEEEEcCCcccchH---H--HHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhc---C-C
Confidence 56 99999999654433 1 45677888888899999999996432 2222 56799999999999983 2 5
Q ss_pred CCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCC
Q 019193 180 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDH 259 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
++ +|+|+|+|+|...++.+|.+.+ ++|+|+.+|+++.....- +. .+..
T Consensus 129 ~~-~Iil~G~SiGt~~tv~Lasr~~-----~~alVL~SPf~S~~rv~~------------------------~~-~~~~- 176 (258)
T KOG1552|consen 129 PE-RIILYGQSIGTVPTVDLASRYP-----LAAVVLHSPFTSGMRVAF------------------------PD-TKTT- 176 (258)
T ss_pred Cc-eEEEEEecCCchhhhhHhhcCC-----cceEEEeccchhhhhhhc------------------------cC-cceE-
Confidence 67 9999999999999888888753 899999999987533211 00 0000
Q ss_pred CCCCCCCCCCCCcCCCC--CCcEEEEEcCCCcChHHH--HHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHH
Q 019193 260 PACNPFGPKGIDLVGVK--FPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDE 335 (344)
Q Consensus 260 ~~~~~~~~~~~~~~~~~--~pP~li~~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~ 335 (344)
...+.+ ..+++.+ ..|+||+||++|.++|.+ .++.++.+.. ++-....|++|.... -..+.++.
T Consensus 177 ~~~d~f----~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~~~~-----~~~~yi~~ 244 (258)
T KOG1552|consen 177 YCFDAF----PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHNDIE-----LYPEYIEH 244 (258)
T ss_pred Eeeccc----cccCcceeccCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCcccc-----cCHHHHHH
Confidence 111110 1122222 348999999999998864 6777776653 677788899996532 23346666
Q ss_pred HHHHHh
Q 019193 336 ISNFVS 341 (344)
Q Consensus 336 ~~~fl~ 341 (344)
+.+|+.
T Consensus 245 l~~f~~ 250 (258)
T KOG1552|consen 245 LRRFIS 250 (258)
T ss_pred HHHHHH
Confidence 666654
No 35
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.66 E-value=1.3e-15 Score=125.04 Aligned_cols=212 Identities=15% Similarity=0.101 Sum_probs=132.8
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC---CC----CCCCchhhHHHHHHHHHHhcccccCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA---PE----NRYPCAYDDGWTVLKWAKSRSWLQSKD 179 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~---p~----~~~~~~~~D~~~a~~~l~~~~~~~~~d 179 (344)
.+|+++|| | .|+... ...+++.|.++ ||.|.+|.|+.- |+ ....+..+|+.++++++.+.+.
T Consensus 16 ~AVLllHG--F-TGt~~D--vr~Lgr~L~e~-GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy----- 84 (243)
T COG1647 16 RAVLLLHG--F-TGTPRD--VRMLGRYLNEN-GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY----- 84 (243)
T ss_pred EEEEEEec--c-CCCcHH--HHHHHHHHHHC-CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC-----
Confidence 78999999 4 355544 57888888887 999999999853 22 2334567999999999997743
Q ss_pred CCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChh-------hhhhCCCCccCHHhHHHHHHHhCC
Q 019193 180 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTES-------EKRLDGKYFVTVQDRDWYWRAYLP 252 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
+ .|+++|-||||-+|+.+|.+. .+++++.+|+-+.......- ..+.........+..+.....|..
T Consensus 85 -~-eI~v~GlSmGGv~alkla~~~-----p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~ 157 (243)
T COG1647 85 -D-EIAVVGLSMGGVFALKLAYHY-----PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKD 157 (243)
T ss_pred -C-eEEEEeecchhHHHHHHHhhC-----CccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence 3 899999999999999999886 47888888876653322110 011111112222222222222221
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHH--HHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHH
Q 019193 253 EGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQL--AYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFY 330 (344)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~--~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~ 330 (344)
..................+++.+ ..|++|+.|.+|+.+|..- -+.... ...+.++..|++.+|..... .+.+
T Consensus 158 ~~~~~~~~~~~~i~~~~~~~~~I-~~pt~vvq~~~D~mv~~~sA~~Iy~~v--~s~~KeL~~~e~SgHVIt~D---~Erd 231 (243)
T COG1647 158 TPMTTTAQLKKLIKDARRSLDKI-YSPTLVVQGRQDEMVPAESANFIYDHV--ESDDKELKWLEGSGHVITLD---KERD 231 (243)
T ss_pred chHHHHHHHHHHHHHHHhhhhhc-ccchhheecccCCCCCHHHHHHHHHhc--cCCcceeEEEccCCceeecc---hhHH
Confidence 00000000000000000111211 3489999999999988642 222222 23578999999999988643 6789
Q ss_pred HHHHHHHHHHhc
Q 019193 331 TVMDEISNFVSC 342 (344)
Q Consensus 331 ~~~~~~~~fl~~ 342 (344)
++.+++.+||+.
T Consensus 232 ~v~e~V~~FL~~ 243 (243)
T COG1647 232 QVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHhhC
Confidence 999999999974
No 36
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.65 E-value=1.3e-14 Score=129.11 Aligned_cols=216 Identities=15% Similarity=0.138 Sum_probs=122.1
Q ss_pred cEEEEEcCCc-ccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCC-----CCCchhhHHHHHHHHHHhcccccCCCC
Q 019193 107 PVIIFFHGGS-FAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-----RYPCAYDDGWTVLKWAKSRSWLQSKDS 180 (344)
Q Consensus 107 p~vv~~HGGg-~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~-----~~~~~~~D~~~a~~~l~~~~~~~~~d~ 180 (344)
+.||++|||. +..|+... +..+++.|+++ |+.|+.+|+|...+. .+....+|+.++++++.+... ..
T Consensus 27 ~~vv~i~gg~~~~~g~~~~--~~~la~~l~~~-G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~----g~ 99 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQ--FVLLARRLAEA-GFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAP----HL 99 (274)
T ss_pred CeEEEEeCCccccCCchhH--HHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCC----CC
Confidence 4566666653 44444322 56678888887 999999999965432 223345899999999986521 12
Q ss_pred CCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCC-hh-hhhhCCCCccCHHhHHHHHHHhCCCCCCC-
Q 019193 181 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT-ES-EKRLDGKYFVTVQDRDWYWRAYLPEGANR- 257 (344)
Q Consensus 181 ~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 257 (344)
+ +|+++|+|+||.+++.++... .+++++|+++|++...... .. ........... ..+|..+..+..+.
T Consensus 100 ~-~i~l~G~S~Gg~~a~~~a~~~----~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~ 170 (274)
T TIGR03100 100 R-RIVAWGLCDAASAALLYAPAD----LRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS----ADFWRKLLSGEVNLG 170 (274)
T ss_pred C-cEEEEEECHHHHHHHHHhhhC----CCccEEEEECCccCCcccchHHHHHHHHHHHHhC----hHHHHHhcCCCccHH
Confidence 4 899999999999999887542 2699999999986532211 10 00000000000 01112111110000
Q ss_pred ------------C-CCCCCCCCC-CC----CCcCCCCCCcEEEEEcCCCcChHHHHH---HHHHHHH-C-CCCEEEEEeC
Q 019193 258 ------------D-HPACNPFGP-KG----IDLVGVKFPKSLVVVAGLDLIQDWQLA---YMEGLKK-A-GQDVKLLYLE 314 (344)
Q Consensus 258 ------------~-~~~~~~~~~-~~----~~~~~~~~pP~li~~G~~D~l~~~~~~---~~~~L~~-~-g~~~~~~~~~ 314 (344)
. .+...+... .. ..+... ..|+++++|+.|...+.-.+ ...+.++ . ...+++..++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~ 249 (274)
T TIGR03100 171 SSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERF-QGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEID 249 (274)
T ss_pred HHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhc-CCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecC
Confidence 0 000000000 00 011111 34899999999987653211 0022222 1 2468999999
Q ss_pred CCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 315 QATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 315 g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
+++|.... .+..+++.+.+.+||++
T Consensus 250 ~~~H~l~~---e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 250 GADHTFSD---RVWREWVAARTTEWLRR 274 (274)
T ss_pred CCCccccc---HHHHHHHHHHHHHHHhC
Confidence 99995422 24568899999999964
No 37
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.65 E-value=2.9e-14 Score=128.80 Aligned_cols=124 Identities=17% Similarity=0.153 Sum_probs=82.2
Q ss_pred EEEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEe
Q 019193 65 SFDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVS 144 (344)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~ 144 (344)
.+.+.+++.++...++++.... .... |+||++||.+. +. ..|..++..|+++ ||.|++
T Consensus 21 ~~~~~~~~~~~~~~~i~y~~~G---------------~~~~-~~lvliHG~~~---~~--~~w~~~~~~L~~~-gy~vi~ 78 (302)
T PRK00870 21 PHYVDVDDGDGGPLRMHYVDEG---------------PADG-PPVLLLHGEPS---WS--YLYRKMIPILAAA-GHRVIA 78 (302)
T ss_pred ceeEeecCCCCceEEEEEEecC---------------CCCC-CEEEEECCCCC---ch--hhHHHHHHHHHhC-CCEEEE
Confidence 3456666655655566544322 1134 88999999541 22 2377888888876 999999
Q ss_pred eccCCCCCCCCCc-----hhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 145 VNYRRAPENRYPC-----AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 145 ~dyr~~p~~~~~~-----~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
+|.|.......+. .+++..+.+..+.++ ++.+ +++|+|||+||.+|+.++.+.++ ++++++++++.
T Consensus 79 ~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~-----l~~~-~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 149 (302)
T PRK00870 79 PDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQ-----LDLT-DVTLVCQDWGGLIGLRLAAEHPD---RFARLVVANTG 149 (302)
T ss_pred ECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-----cCCC-CEEEEEEChHHHHHHHHHHhChh---heeEEEEeCCC
Confidence 9999765443221 223333333333333 2345 89999999999999999988766 69999999874
No 38
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.63 E-value=1.8e-14 Score=115.35 Aligned_cols=145 Identities=21% Similarity=0.193 Sum_probs=102.7
Q ss_pred EEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEe
Q 019193 108 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLA 187 (344)
Q Consensus 108 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~ 187 (344)
+||++||+|. +. ..|..+++.++++ |+.|+.+||+..... ....+..++++++.... .+++ +|+++
T Consensus 1 ~vv~~HG~~~---~~--~~~~~~~~~l~~~-G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~-~i~l~ 66 (145)
T PF12695_consen 1 VVVLLHGWGG---SR--RDYQPLAEALAEQ-GYAVVAFDYPGHGDS---DGADAVERVLADIRAGY----PDPD-RIILI 66 (145)
T ss_dssp EEEEECTTTT---TT--HHHHHHHHHHHHT-TEEEEEESCTTSTTS---HHSHHHHHHHHHHHHHH----CTCC-EEEEE
T ss_pred CEEEECCCCC---CH--HHHHHHHHHHHHC-CCEEEEEecCCCCcc---chhHHHHHHHHHHHhhc----CCCC-cEEEE
Confidence 5899999763 32 2378899999998 999999999876554 44456677777765321 3677 99999
Q ss_pred eCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCC
Q 019193 188 GDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGP 267 (344)
Q Consensus 188 G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (344)
|+|+||.+++.++.+. .+++++|+++|+.+ .. . +
T Consensus 67 G~S~Gg~~a~~~~~~~----~~v~~~v~~~~~~~----~~---~------------------~----------------- 100 (145)
T PF12695_consen 67 GHSMGGAIAANLAARN----PRVKAVVLLSPYPD----SE---D------------------L----------------- 100 (145)
T ss_dssp EETHHHHHHHHHHHHS----TTESEEEEESESSG----CH---H------------------H-----------------
T ss_pred EEccCcHHHHHHhhhc----cceeEEEEecCccc----hh---h------------------h-----------------
Confidence 9999999999998865 26999999999421 00 0 0
Q ss_pred CCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceE
Q 019193 268 KGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIG 319 (344)
Q Consensus 268 ~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~ 319 (344)
... ..|+++++|+.|.+++.. ...+..++...+.++++++|++|.
T Consensus 101 --~~~----~~pv~~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 101 --AKI----RIPVLFIHGENDPLVPPE-QVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --TTT----TSEEEEEEETT-SSSHHH-HHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --hcc----CCcEEEEEECCCCcCCHH-HHHHHHHHcCCCcEEEEeCCCcCc
Confidence 000 238999999999987642 222223334468999999999993
No 39
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.62 E-value=8.6e-14 Score=122.06 Aligned_cols=222 Identities=11% Similarity=0.069 Sum_probs=129.3
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCC-------CCCchhhHHHHHHHHHHhccccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-------RYPCAYDDGWTVLKWAKSRSWLQ 176 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~-------~~~~~~~D~~~a~~~l~~~~~~~ 176 (344)
+. |+||++||.|.... .....+..+++.|+++ ||.|+.+|||..... .+....+|+.++++|+.+..
T Consensus 24 ~~-~~VlllHG~g~~~~-~~~~~~~~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~--- 97 (266)
T TIGR03101 24 PR-GVVIYLPPFAEEMN-KSRRMVALQARAFAAG-GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQG--- 97 (266)
T ss_pred Cc-eEEEEECCCccccc-chhHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC---
Confidence 56 99999999543211 1122356678888877 999999999975432 22234688999999997652
Q ss_pred CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCC--C--CccCHHhHHHHHHHhCC
Q 019193 177 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDG--K--YFVTVQDRDWYWRAYLP 252 (344)
Q Consensus 177 ~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~ 252 (344)
.. +|+|+|+|+||.+|+.++.+.++ .++++|+++|+++.........++.- . .-...............
T Consensus 98 ---~~-~v~LvG~SmGG~vAl~~A~~~p~---~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~~~~~~~~~~~~ 170 (266)
T TIGR03101 98 ---HP-PVTLWGLRLGALLALDAANPLAA---KCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAEASNSLRERLLA 170 (266)
T ss_pred ---CC-CEEEEEECHHHHHHHHHHHhCcc---ccceEEEeccccchHHHHHHHHHHHHHHHhccccccccchhHHhhccC
Confidence 35 89999999999999999887654 68999999998775443221111100 0 00000000000000000
Q ss_pred CC-CCCCCCCCCC-CCCC--CCCcCCC--CCCcEEEEEcCC--C-cChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEEC
Q 019193 253 EG-ANRDHPACNP-FGPK--GIDLVGV--KFPKSLVVVAGL--D-LIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFL 323 (344)
Q Consensus 253 ~~-~~~~~~~~~~-~~~~--~~~~~~~--~~pP~li~~G~~--D-~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~ 323 (344)
.. .........+ +... ..++... .-.+++++.-+- | ..-+...++++.+++.|++|+...++|. .|+..
T Consensus 171 ~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~~~--~~~~~ 248 (266)
T TIGR03101 171 GEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVPGP--AFWQT 248 (266)
T ss_pred CCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecCCc--hhhcc
Confidence 00 0000000000 0000 0111100 023577776532 2 3456678999999999999999999997 78777
Q ss_pred CCchHHHHHHHHHHHHH
Q 019193 324 PNNGHFYTVMDEISNFV 340 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~fl 340 (344)
+...+....++...+++
T Consensus 249 ~~~~~~p~~~~~~~~~~ 265 (266)
T TIGR03101 249 QEIEEAPELIARTTALW 265 (266)
T ss_pred hhhhHhHHHHHHHHhhc
Confidence 66556666666666554
No 40
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.61 E-value=2.1e-13 Score=122.67 Aligned_cols=215 Identities=13% Similarity=0.057 Sum_probs=121.8
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC----------chhhHHHHHHHHHHhccccc
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----------CAYDDGWTVLKWAKSRSWLQ 176 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~----------~~~~D~~~a~~~l~~~~~~~ 176 (344)
|.||++||.+. +. ..|..+...|+.+ +.|+++|+|.....+.+ ..++|..+.+.-+.+.
T Consensus 30 ~~vlllHG~~~---~~--~~w~~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~---- 98 (294)
T PLN02824 30 PALVLVHGFGG---NA--DHWRKNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD---- 98 (294)
T ss_pred CeEEEECCCCC---Ch--hHHHHHHHHHHhC--CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH----
Confidence 78999999542 32 2377888888864 69999999976554332 1234444444443333
Q ss_pred CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCC--CCh-hhh-------h-hCCCC--------c
Q 019193 177 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE--RTE-SEK-------R-LDGKY--------F 237 (344)
Q Consensus 177 ~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~--~~~-~~~-------~-~~~~~--------~ 237 (344)
...+ +++|+|||+||.+|+.++.+.++ +++++|+++|...... ... ... . ..... .
T Consensus 99 -l~~~-~~~lvGhS~Gg~va~~~a~~~p~---~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (294)
T PLN02824 99 -VVGD-PAFVICNSVGGVVGLQAAVDAPE---LVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSV 173 (294)
T ss_pred -hcCC-CeEEEEeCHHHHHHHHHHHhChh---heeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhh
Confidence 1235 89999999999999999998876 7999999987542110 000 000 0 00000 0
Q ss_pred cCHHhHHHHHHHhCCCCCCCCCC--------CC---------C--CCCCCCCCcCCCC--CCcEEEEEcCCCcChHHHHH
Q 019193 238 VTVQDRDWYWRAYLPEGANRDHP--------AC---------N--PFGPKGIDLVGVK--FPKSLVVVAGLDLIQDWQLA 296 (344)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~--------~~---------~--~~~~~~~~~~~~~--~pP~li~~G~~D~l~~~~~~ 296 (344)
........++............. .. . ...........+. ..|+++++|+.|.+++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-- 251 (294)
T PLN02824 174 ATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVE-- 251 (294)
T ss_pred cCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChH--
Confidence 00000011111111000000000 00 0 0000000001111 458999999999987643
Q ss_pred HHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 297 YMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 297 ~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
.++++.+.....++.++++++|... .+..+++.+.+.+|++++
T Consensus 252 ~~~~~~~~~~~~~~~~i~~~gH~~~----~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 252 LGRAYANFDAVEDFIVLPGVGHCPQ----DEAPELVNPLIESFVARH 294 (294)
T ss_pred HHHHHHhcCCccceEEeCCCCCChh----hhCHHHHHHHHHHHHhcC
Confidence 3355655555578999999999654 356788999999999875
No 41
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.60 E-value=6.1e-14 Score=123.22 Aligned_cols=213 Identities=16% Similarity=0.106 Sum_probs=119.4
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC------CCchhhHHHHHHHHHHhccccc
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR------YPCAYDDGWTVLKWAKSRSWLQ 176 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~------~~~~~~D~~~a~~~l~~~~~~~ 176 (344)
... |+||++||.+ ++.. .|..++..|++ ++.|+.+|+|...+.. +....+|+.++++++
T Consensus 14 ~~~-~~iv~lhG~~---~~~~--~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l------- 78 (255)
T PRK10673 14 HNN-SPIVLVHGLF---GSLD--NLGVLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL------- 78 (255)
T ss_pred CCC-CCEEEECCCC---Cchh--HHHHHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-------
Confidence 355 8999999954 2332 36778888865 7999999999754332 223345555555443
Q ss_pred CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc--ccCCCCCChhh----hhhCCCCccCHHhHHHHHHHh
Q 019193 177 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP--MFGGQERTESE----KRLDGKYFVTVQDRDWYWRAY 250 (344)
Q Consensus 177 ~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 250 (344)
..+ ++.|+|||+||.+|+.++.+.++ ++++++++.+ ........... .................+...
T Consensus 79 --~~~-~~~lvGhS~Gg~va~~~a~~~~~---~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PRK10673 79 --QIE-KATFIGHSMGGKAVMALTALAPD---RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQH 152 (255)
T ss_pred --CCC-ceEEEEECHHHHHHHHHHHhCHh---hcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHh
Confidence 335 89999999999999999988765 6899888753 21110000000 000000000000000000000
Q ss_pred CC---------CCCCCCCCC-C-----CCCCCCCCCcCCCC--CCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEe
Q 019193 251 LP---------EGANRDHPA-C-----NPFGPKGIDLVGVK--FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYL 313 (344)
Q Consensus 251 ~~---------~~~~~~~~~-~-----~~~~~~~~~~~~~~--~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~ 313 (344)
+. ......... . ..+.. ....+.++ ..|+++++|+.|..++. ...+.+.+...++++.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~--~~~~~~~~~~~~~~~~~~ 229 (255)
T PRK10673 153 LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-IVGWEKIPAWPHPALFIRGGNSPYVTE--AYRDDLLAQFPQARAHVI 229 (255)
T ss_pred cCCHHHHHHHHhcCCcceeEeeHHHHHHhHHH-HhCCcccCCCCCCeEEEECCCCCCCCH--HHHHHHHHhCCCcEEEEe
Confidence 00 000000000 0 00000 00001111 24899999999988764 345666666667899999
Q ss_pred CCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 314 EQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 314 ~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
++++|.+.. +..+++.+.+.+||.++
T Consensus 230 ~~~gH~~~~----~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 230 AGAGHWVHA----EKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCCeeec----cCHHHHHHHHHHHHhcC
Confidence 999996643 34677999999999864
No 42
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.58 E-value=1.7e-13 Score=119.77 Aligned_cols=215 Identities=18% Similarity=0.129 Sum_probs=114.6
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC----chhhHHHHHHHHHHhcccccCCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAYDDGWTVLKWAKSRSWLQSKD 179 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~----~~~~D~~~a~~~l~~~~~~~~~d 179 (344)
+. |+||++||.+. +.. .|......+. + ++.|+++|+|.......+ ..++|..+.+..+.+. ++
T Consensus 12 ~~-~~iv~lhG~~~---~~~--~~~~~~~~l~-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~-----~~ 78 (257)
T TIGR03611 12 DA-PVVVLSSGLGG---SGS--YWAPQLDVLT-Q-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA-----LN 78 (257)
T ss_pred CC-CEEEEEcCCCc---chh--HHHHHHHHHH-h-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-----hC
Confidence 45 89999999552 322 2555665554 4 799999999965433221 1233333333323232 23
Q ss_pred CCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhh----hh---CCC-CccCHHhHHHHHHHhC
Q 019193 180 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEK----RL---DGK-YFVTVQDRDWYWRAYL 251 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~----~~---~~~-~~~~~~~~~~~~~~~~ 251 (344)
.. +++|+|+|+||.+|+.++.+.++ .++++|+++++........... .. ... .+........+...+.
T Consensus 79 ~~-~~~l~G~S~Gg~~a~~~a~~~~~---~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T TIGR03611 79 IE-RFHFVGHALGGLIGLQLALRYPE---RLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWI 154 (257)
T ss_pred CC-cEEEEEechhHHHHHHHHHHChH---HhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHh
Confidence 45 89999999999999999987665 6899999988755322111000 00 000 0000000000000000
Q ss_pred CCCC----CCCCCCCCCCC---------------CCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEE
Q 019193 252 PEGA----NRDHPACNPFG---------------PKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLY 312 (344)
Q Consensus 252 ~~~~----~~~~~~~~~~~---------------~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~ 312 (344)
.... .........+. .....+... ..|+++++|++|.+++... ++++.+.-..++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~ 231 (257)
T TIGR03611 155 SENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRI-QHPVLLIANRDDMLVPYTQ--SLRLAAALPNAQLKL 231 (257)
T ss_pred hccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhccc-CccEEEEecCcCcccCHHH--HHHHHHhcCCceEEE
Confidence 0000 00000000000 000011111 3489999999999876432 233433334568889
Q ss_pred eCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 313 LEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 313 ~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
+++++|.+.. ++.++..+.+.+||++
T Consensus 232 ~~~~gH~~~~----~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 232 LPYGGHASNV----TDPETFNRALLDFLKT 257 (257)
T ss_pred ECCCCCCccc----cCHHHHHHHHHHHhcC
Confidence 9999997643 3467788999999863
No 43
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.57 E-value=1.3e-13 Score=119.43 Aligned_cols=211 Identities=16% Similarity=0.167 Sum_probs=118.2
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC-----chhhHHHHH-HHHHHhcccccCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-----CAYDDGWTV-LKWAKSRSWLQSKDS 180 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~-----~~~~D~~~a-~~~l~~~~~~~~~d~ 180 (344)
|+||++||.+. +.. .|..++..|+ + |+.|+.+|+|.......+ ..++++... +..+.+. .+.
T Consensus 2 ~~vv~~hG~~~---~~~--~~~~~~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 69 (251)
T TIGR03695 2 PVLVFLHGFLG---SGA--DWQALIELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQ-----LGI 69 (251)
T ss_pred CEEEEEcCCCC---chh--hHHHHHHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHH-----cCC
Confidence 78999999542 333 3788888888 5 999999999975544332 223343333 4444443 345
Q ss_pred CCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCC----ccCHHhHHHHHHHhCCCC--
Q 019193 181 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKY----FVTVQDRDWYWRAYLPEG-- 254 (344)
Q Consensus 181 ~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-- 254 (344)
+ +++|+|||+||.+|+.++.+.++ .+++++++++.................. .+.......+...+....
T Consensus 70 ~-~~~l~G~S~Gg~ia~~~a~~~~~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR03695 70 E-PFFLVGYSMGGRIALYYALQYPE---RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLF 145 (251)
T ss_pred C-eEEEEEeccHHHHHHHHHHhCch---heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCcee
Confidence 6 99999999999999999998765 6899999887654322110000000000 000000000000000000
Q ss_pred -----CC------------CCCCC--CCC-----CCCCC---CCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCC
Q 019193 255 -----AN------------RDHPA--CNP-----FGPKG---IDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQD 307 (344)
Q Consensus 255 -----~~------------~~~~~--~~~-----~~~~~---~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~ 307 (344)
.. ...+. ... ..... ..+... ..|+++++|+.|...+. ..+.+.+...+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~---~~~~~~~~~~~ 221 (251)
T TIGR03695 146 ASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQAL-TIPVLYLCGEKDEKFVQ---IAKEMQKLLPN 221 (251)
T ss_pred eecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCC-CCceEEEeeCcchHHHH---HHHHHHhcCCC
Confidence 00 00000 000 00000 001111 35899999999986642 34556666667
Q ss_pred EEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 308 VKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 308 ~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
+++..+++++|..... ..+++.+.+.+||+
T Consensus 222 ~~~~~~~~~gH~~~~e----~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 222 LTLVIIANAGHNIHLE----NPEAFAKILLAFLE 251 (251)
T ss_pred CcEEEEcCCCCCcCcc----ChHHHHHHHHHHhC
Confidence 8999999999976533 35678888888874
No 44
>PRK10985 putative hydrolase; Provisional
Probab=99.57 E-value=1.3e-13 Score=125.80 Aligned_cols=107 Identities=17% Similarity=0.219 Sum_probs=76.4
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCC-------CchhhHHHHHHHHHHhccccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-------PCAYDDGWTVLKWAKSRSWLQ 176 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~-------~~~~~D~~~a~~~l~~~~~~~ 176 (344)
+. |+||++||.+ |+........++..|+++ |+.|+.+|||.....+. ....+|+..+++++.+.
T Consensus 57 ~~-p~vll~HG~~---g~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~---- 127 (324)
T PRK10985 57 HK-PRLVLFHGLE---GSFNSPYAHGLLEAAQKR-GWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQRE---- 127 (324)
T ss_pred CC-CEEEEeCCCC---CCCcCHHHHHHHHHHHHC-CCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHh----
Confidence 56 9999999943 222222234577788876 99999999997533221 23569999999999876
Q ss_pred CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCC
Q 019193 177 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 222 (344)
Q Consensus 177 ~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~ 222 (344)
.... +++++|||+||++++.++.+..+ ...+.+++++++.++.
T Consensus 128 -~~~~-~~~~vG~S~GG~i~~~~~~~~~~-~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 128 -FGHV-PTAAVGYSLGGNMLACLLAKEGD-DLPLDAAVIVSAPLML 170 (324)
T ss_pred -CCCC-CEEEEEecchHHHHHHHHHhhCC-CCCccEEEEEcCCCCH
Confidence 2345 89999999999988877766533 1247888888876653
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.56 E-value=9e-14 Score=127.02 Aligned_cols=203 Identities=15% Similarity=0.134 Sum_probs=112.1
Q ss_pred HHHHHHHHhhCCcEEEeeccCCCCCC-----------CCCchhhHHHHHHHHHHhccccc--------------CCC-CC
Q 019193 128 DILCRRLVGTCKAVVVSVNYRRAPEN-----------RYPCAYDDGWTVLKWAKSRSWLQ--------------SKD-SK 181 (344)
Q Consensus 128 ~~~~~~la~~~g~~vv~~dyr~~p~~-----------~~~~~~~D~~~a~~~l~~~~~~~--------------~~d-~~ 181 (344)
..++..|+++ |+.|+++|.|..... .+.+.++|+.+.++.+.+..... ... ..
T Consensus 64 ~~~~~~l~~~-G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (332)
T TIGR01607 64 DSWIENFNKN-GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRL 142 (332)
T ss_pred HHHHHHHHHC-CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCC
Confidence 4678888888 999999999954321 23334577777777765421000 011 24
Q ss_pred CeEEEeeCCchHHHHHHHHHHhccc-----CCeeeEEEEeccccCCCCCC-hhhhhhCCCCccCHHhHHHHHHHhCCC--
Q 019193 182 AHIYLAGDSSGGNIVHHVALRAVES-----EVEILGNILLNPMFGGQERT-ESEKRLDGKYFVTVQDRDWYWRAYLPE-- 253 (344)
Q Consensus 182 ~~i~l~G~SaGG~lA~~~a~~~~~~-----~~~i~~~il~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 253 (344)
+++|+||||||.+++.++...... ...++|+|+++|++...... ....... .......... ..+.+.
T Consensus 143 -p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~---~~~~~l~~~~-~~~~p~~~ 217 (332)
T TIGR01607 143 -PMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFK---YFYLPVMNFM-SRVFPTFR 217 (332)
T ss_pred -ceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhh---hhHHHHHHHH-HHHCCccc
Confidence 899999999999999988765321 13689999999986432110 0000000 0000000000 000000
Q ss_pred --------------CCCCCCCCCC-CC-CC------------CCCCcCCCC-CCcEEEEEcCCCcChHHH--HHHHHHHH
Q 019193 254 --------------GANRDHPACN-PF-GP------------KGIDLVGVK-FPKSLVVVAGLDLIQDWQ--LAYMEGLK 302 (344)
Q Consensus 254 --------------~~~~~~~~~~-~~-~~------------~~~~~~~~~-~pP~li~~G~~D~l~~~~--~~~~~~L~ 302 (344)
.....++... .. .. ......... ..|+|+++|+.|.+++.. ..+++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~ 297 (332)
T TIGR01607 218 ISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLS 297 (332)
T ss_pred ccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhcc
Confidence 0000111110 00 00 001111111 248999999999987643 33333222
Q ss_pred HCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 303 KAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 303 ~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
..++++++|+|+.|.....++ .+++++++.+||+
T Consensus 298 --~~~~~l~~~~g~~H~i~~E~~---~~~v~~~i~~wL~ 331 (332)
T TIGR01607 298 --ISNKELHTLEDMDHVITIEPG---NEEVLKKIIEWIS 331 (332)
T ss_pred --CCCcEEEEECCCCCCCccCCC---HHHHHHHHHHHhh
Confidence 235789999999998876543 6789999999986
No 46
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.55 E-value=5e-13 Score=118.67 Aligned_cols=211 Identities=15% Similarity=0.037 Sum_probs=116.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC----chhhHHHHHHHHHHhcccccCCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAYDDGWTVLKWAKSRSWLQSKDSKA 182 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~----~~~~D~~~a~~~l~~~~~~~~~d~~~ 182 (344)
|+||++||.|. +. ..|..++..|++ ++.|+.+|+|..+....+ ..+++..+.+..+.+. .+.+
T Consensus 29 ~~vv~~hG~~~---~~--~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~-----~~~~- 95 (278)
T TIGR03056 29 PLLLLLHGTGA---ST--HSWRDLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA-----EGLS- 95 (278)
T ss_pred CeEEEEcCCCC---CH--HHHHHHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH-----cCCC-
Confidence 88999999542 22 236777777765 699999999976543322 2345554445444443 2335
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCC-----hhhhhh-CCCCccCH---------HhHHHHH
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT-----ESEKRL-DGKYFVTV---------QDRDWYW 247 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~-----~~~~~~-~~~~~~~~---------~~~~~~~ 247 (344)
+++|+|||+||.+|+.++.+.++ ++++++++++........ +..... ........ .....+.
T Consensus 96 ~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (278)
T TIGR03056 96 PDGVIGHSAGAAIALRLALDGPV---TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLI 172 (278)
T ss_pred CceEEEECccHHHHHHHHHhCCc---ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHh
Confidence 89999999999999999988765 578888887754321100 000000 00000000 0000000
Q ss_pred HHhCCCCCCC----------CCCC--------CC--CCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCC
Q 019193 248 RAYLPEGANR----------DHPA--------CN--PFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQD 307 (344)
Q Consensus 248 ~~~~~~~~~~----------~~~~--------~~--~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~ 307 (344)
... ...... ..+. .. ........+..+ ..|+++++|++|.+++.. ..+.+.+.-..
T Consensus 173 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~g~~D~~vp~~--~~~~~~~~~~~ 248 (278)
T TIGR03056 173 RDT-GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRI-TIPLHLIAGEEDKAVPPD--ESKRAATRVPT 248 (278)
T ss_pred hcc-ccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccC-CCCEEEEEeCCCcccCHH--HHHHHHHhccC
Confidence 000 000000 0000 00 000000011111 238999999999988753 23445444445
Q ss_pred EEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 308 VKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 308 ~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
+++..+++++|.+.. +..++..+.+.+|++
T Consensus 249 ~~~~~~~~~gH~~~~----e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 249 ATLHVVPGGGHLVHE----EQADGVVGLILQAAE 278 (278)
T ss_pred CeEEEECCCCCcccc----cCHHHHHHHHHHHhC
Confidence 789999999997653 346778889999874
No 47
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.55 E-value=1.9e-13 Score=111.67 Aligned_cols=223 Identities=15% Similarity=0.091 Sum_probs=145.4
Q ss_pred CCceEEEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCc
Q 019193 61 DGVFSFDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKA 140 (344)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~ 140 (344)
.++..+.+++...+.+.++-|.=.++ ... |+++|+||-....|. ....++-+-.++++
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~E----------------~S~-pTlLyfh~NAGNmGh-----r~~i~~~fy~~l~m 107 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLSE----------------SSR-PTLLYFHANAGNMGH-----RLPIARVFYVNLKM 107 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeeccc----------------CCC-ceEEEEccCCCcccc-----hhhHHHHHHHHcCc
Confidence 45556666666667777776654433 356 999999995533332 35566777778899
Q ss_pred EEEeeccCCC---CCCCCCch-hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEe
Q 019193 141 VVVSVNYRRA---PENRYPCA-YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL 216 (344)
Q Consensus 141 ~vv~~dyr~~---p~~~~~~~-~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~ 216 (344)
.|+.++||.- ...+-... .-|..++++|+..+.. .|.. ++++.|.|.||..|..+|....+ ++.++|+-
T Consensus 108 nv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~---~dkt-kivlfGrSlGGAvai~lask~~~---ri~~~ivE 180 (300)
T KOG4391|consen 108 NVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPD---LDKT-KIVLFGRSLGGAVAIHLASKNSD---RISAIIVE 180 (300)
T ss_pred eEEEEEeeccccCCCCccccceeccHHHHHHHHhcCcc---CCcc-eEEEEecccCCeeEEEeeccchh---heeeeeee
Confidence 9999999954 33344444 4799999999999877 8999 99999999999999999887766 79999998
Q ss_pred ccccCCCCCC-hhhhhhCCCCccCHHhH-HHHHH-HhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHH
Q 019193 217 NPMFGGQERT-ESEKRLDGKYFVTVQDR-DWYWR-AYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW 293 (344)
Q Consensus 217 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~ 293 (344)
..+++..... +... ....... .+..+ .| .+. ..+.. .--|.|++.|..|.++|.
T Consensus 181 NTF~SIp~~~i~~v~------p~~~k~i~~lc~kn~~-----------~S~-----~ki~~-~~~P~LFiSGlkDelVPP 237 (300)
T KOG4391|consen 181 NTFLSIPHMAIPLVF------PFPMKYIPLLCYKNKW-----------LSY-----RKIGQ-CRMPFLFISGLKDELVPP 237 (300)
T ss_pred chhccchhhhhheec------cchhhHHHHHHHHhhh-----------cch-----hhhcc-ccCceEEeecCccccCCc
Confidence 8887653321 1000 0011110 11111 11 000 11111 123799999999999986
Q ss_pred HHHHHHHH-HHCC-CCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 294 QLAYMEGL-KKAG-QDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 294 ~~~~~~~L-~~~g-~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
-. + ++| +..+ ...++.+||++.|.-... .+-.++.+.+||.+
T Consensus 238 ~~-M-r~Ly~~c~S~~Krl~eFP~gtHNDT~i-----~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 238 VM-M-RQLYELCPSRTKRLAEFPDGTHNDTWI-----CDGYFQAIEDFLAE 281 (300)
T ss_pred HH-H-HHHHHhCchhhhhheeCCCCccCceEE-----eccHHHHHHHHHHH
Confidence 42 2 333 3333 457899999999963221 23367777788765
No 48
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.55 E-value=6.3e-13 Score=124.49 Aligned_cols=99 Identities=21% Similarity=0.289 Sum_probs=67.5
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCch----hhHHH-----HHHHHHHhccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA----YDDGW-----TVLKWAKSRSW 174 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~----~~D~~-----~a~~~l~~~~~ 174 (344)
.. |+||++||.|. +. ..|...+..|++ ++.|+++|+|.......+.. .+++. .+.+|+..
T Consensus 104 ~~-p~vvllHG~~~---~~--~~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 172 (402)
T PLN02894 104 DA-PTLVMVHGYGA---SQ--GFFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA--- 172 (402)
T ss_pred CC-CEEEEECCCCc---ch--hHHHHHHHHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH---
Confidence 55 89999999663 22 225566677764 69999999997654432221 11211 12233322
Q ss_pred ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 175 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 175 ~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
.+.. +++|+|||+||.+|+.++.+.++ +++++|+++|..
T Consensus 173 ---l~~~-~~~lvGhS~GG~la~~~a~~~p~---~v~~lvl~~p~~ 211 (402)
T PLN02894 173 ---KNLS-NFILLGHSFGGYVAAKYALKHPE---HVQHLILVGPAG 211 (402)
T ss_pred ---cCCC-CeEEEEECHHHHHHHHHHHhCch---hhcEEEEECCcc
Confidence 3446 89999999999999999998766 699999998764
No 49
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.54 E-value=2.4e-14 Score=129.00 Aligned_cols=236 Identities=16% Similarity=0.119 Sum_probs=134.6
Q ss_pred CCCceEEEEEEeCCCC--eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhh
Q 019193 60 VDGVFSFDVIVDRGTN--LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGT 137 (344)
Q Consensus 60 ~~~~~~~~~~~~~~~~--~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~ 137 (344)
..++...++++.+.++ +...++.|++. .++. |+||.+||.|.. ... +.. ...++..
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~~---------------~~~~-Pavv~~hGyg~~---~~~--~~~-~~~~a~~ 108 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKNA---------------KGKL-PAVVQFHGYGGR---SGD--PFD-LLPWAAA 108 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES-S---------------SSSE-EEEEEE--TT-----GGG--HHH-HHHHHHT
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCCC---------------CCCc-CEEEEecCCCCC---CCC--ccc-ccccccC
Confidence 4578889999987555 77788999854 3578 999999996632 111 222 3357776
Q ss_pred CCcEEEeeccCCCCC---------------C---CCC---------chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCC
Q 019193 138 CKAVVVSVNYRRAPE---------------N---RYP---------CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDS 190 (344)
Q Consensus 138 ~g~~vv~~dyr~~p~---------------~---~~~---------~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~S 190 (344)
|++|+++|-|..+. + ... ..+.|+..+++++.+... +|++ ||++.|.|
T Consensus 109 -G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpe---vD~~-rI~v~G~S 183 (320)
T PF05448_consen 109 -GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPE---VDGK-RIGVTGGS 183 (320)
T ss_dssp -T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTT---EEEE-EEEEEEET
T ss_pred -CeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCC---cCcc-eEEEEeec
Confidence 99999999884321 0 011 234799999999999877 8999 99999999
Q ss_pred chHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCC-----CCCCCCCC
Q 019193 191 SGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANR-----DHPACNPF 265 (344)
Q Consensus 191 aGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 265 (344)
.||.+++.+|...+ +|++++..+|++......- ..... ..+......+.+..-+..... ...+....
T Consensus 184 qGG~lal~~aaLd~----rv~~~~~~vP~l~d~~~~~---~~~~~-~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~ 255 (320)
T PF05448_consen 184 QGGGLALAAAALDP----RVKAAAADVPFLCDFRRAL---ELRAD-EGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAV 255 (320)
T ss_dssp HHHHHHHHHHHHSS----T-SEEEEESESSSSHHHHH---HHT---STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HH
T ss_pred CchHHHHHHHHhCc----cccEEEecCCCccchhhhh---hcCCc-cccHHHHHHHHhccCCCcccHHHHHHHHhhhhHH
Confidence 99999999887643 5999999999875322110 00000 000011111111000000000 00000000
Q ss_pred CCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 266 GPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 266 ~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
..+..+ ..|+++..|-.|++++.+-.|+.. .....+.++.+|+..+|... .....++..+||++|
T Consensus 256 -nfA~ri----~~pvl~~~gl~D~~cPP~t~fA~y-N~i~~~K~l~vyp~~~He~~-------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 256 -NFARRI----KCPVLFSVGLQDPVCPPSTQFAAY-NAIPGPKELVVYPEYGHEYG-------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp -HHGGG------SEEEEEEETT-SSS-HHHHHHHH-CC--SSEEEEEETT--SSTT-------HHHHHHHHHHHHHH-
T ss_pred -HHHHHc----CCCEEEEEecCCCCCCchhHHHHH-hccCCCeeEEeccCcCCCch-------hhHHHHHHHHHHhcC
Confidence 000122 349999999999999877555433 22234689999999999531 223378899999876
No 50
>PLN02511 hydrolase
Probab=99.54 E-value=4.2e-13 Score=125.12 Aligned_cols=130 Identities=19% Similarity=0.176 Sum_probs=86.8
Q ss_pred EEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeec
Q 019193 67 DVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 67 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d 146 (344)
.+..++++.+.++++.+.... ..... |+||++||.+ |+.....+..++..+.++ |+.|+++|
T Consensus 75 ~l~~~DG~~~~ldw~~~~~~~-------------~~~~~-p~vvllHG~~---g~s~~~y~~~~~~~~~~~-g~~vv~~d 136 (388)
T PLN02511 75 CLRTPDGGAVALDWVSGDDRA-------------LPADA-PVLILLPGLT---GGSDDSYVRHMLLRARSK-GWRVVVFN 136 (388)
T ss_pred EEECCCCCEEEEEecCccccc-------------CCCCC-CEEEEECCCC---CCCCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 344444444777777543210 12345 9999999943 222222234456666665 99999999
Q ss_pred cCCCCCCCC-------CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 147 YRRAPENRY-------PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 147 yr~~p~~~~-------~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
+|.....+. ....+|+.++++++... .... +++++|+|+||++++.++.+.++. ..+.+.+++++.
T Consensus 137 ~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~-----~~~~-~~~lvG~SlGg~i~~~yl~~~~~~-~~v~~~v~is~p 209 (388)
T PLN02511 137 SRGCADSPVTTPQFYSASFTGDLRQVVDHVAGR-----YPSA-NLYAAGWSLGANILVNYLGEEGEN-CPLSGAVSLCNP 209 (388)
T ss_pred cCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHH-----CCCC-CEEEEEechhHHHHHHHHHhcCCC-CCceEEEEECCC
Confidence 997644332 24578999999999875 2334 899999999999999998876542 247888877765
Q ss_pred cC
Q 019193 220 FG 221 (344)
Q Consensus 220 ~~ 221 (344)
.+
T Consensus 210 ~~ 211 (388)
T PLN02511 210 FD 211 (388)
T ss_pred cC
Confidence 54
No 51
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.54 E-value=1.9e-12 Score=119.32 Aligned_cols=130 Identities=12% Similarity=0.105 Sum_probs=87.4
Q ss_pred eEEEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcC---CcccccCCCchhhHHHHHHHHhhCCc
Q 019193 64 FSFDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHG---GSFAHSSANSAIYDILCRRLVGTCKA 140 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HG---Gg~~~g~~~~~~~~~~~~~la~~~g~ 140 (344)
+..++.+. .+.+.++.|.|.... ..+. | ||++|| .+|+. +... ...+++.|+++ |+
T Consensus 37 ~~~~~v~~-~~~~~l~~~~~~~~~--------------~~~~-p-vl~v~~~~~~~~~~-d~~~--~~~~~~~L~~~-G~ 95 (350)
T TIGR01836 37 TPKEVVYR-EDKVVLYRYTPVKDN--------------THKT-P-LLIVYALVNRPYML-DLQE--DRSLVRGLLER-GQ 95 (350)
T ss_pred CCCceEEE-cCcEEEEEecCCCCc--------------CCCC-c-EEEeccccccceec-cCCC--CchHHHHHHHC-CC
Confidence 33344332 356777778776431 1233 5 888998 33332 1111 35788889887 99
Q ss_pred EEEeeccCCCCCCC----CCchh-hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEE
Q 019193 141 VVVSVNYRRAPENR----YPCAY-DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNIL 215 (344)
Q Consensus 141 ~vv~~dyr~~p~~~----~~~~~-~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il 215 (344)
.|+++|||...... +.+.. +|+.++++++.+.. +.+ ++.++|||+||.+++.++...++ +++++++
T Consensus 96 ~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~-----~~~-~i~lvGhS~GG~i~~~~~~~~~~---~v~~lv~ 166 (350)
T TIGR01836 96 DVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTS-----KLD-QISLLGICQGGTFSLCYAALYPD---KIKNLVT 166 (350)
T ss_pred eEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHh-----CCC-cccEEEECHHHHHHHHHHHhCch---heeeEEE
Confidence 99999998643321 11222 35778889988763 345 89999999999999998877655 6999999
Q ss_pred eccccCCC
Q 019193 216 LNPMFGGQ 223 (344)
Q Consensus 216 ~~p~~~~~ 223 (344)
++|.++..
T Consensus 167 ~~~p~~~~ 174 (350)
T TIGR01836 167 MVTPVDFE 174 (350)
T ss_pred eccccccC
Confidence 99887654
No 52
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.53 E-value=8.8e-13 Score=117.64 Aligned_cols=211 Identities=17% Similarity=0.082 Sum_probs=111.6
Q ss_pred cEEEEEcCCcccccCCC-chhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCc--------hhhHHHHHHHHHHhcccccC
Q 019193 107 PVIIFFHGGSFAHSSAN-SAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC--------AYDDGWTVLKWAKSRSWLQS 177 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~-~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~--------~~~D~~~a~~~l~~~~~~~~ 177 (344)
|.||++||.|. +.. +..+...+..++.+ |+.|+++|+|.......+. ..+|+.+++ +.
T Consensus 31 ~~ivllHG~~~---~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l----~~----- 97 (282)
T TIGR03343 31 EAVIMLHGGGP---GAGGWSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLM----DA----- 97 (282)
T ss_pred CeEEEECCCCC---chhhHHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHH----HH-----
Confidence 77999999542 211 11122334556665 8999999999765543321 123333322 22
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCC---CCh-----hhhhhCCCC-------------
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE---RTE-----SEKRLDGKY------------- 236 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~---~~~-----~~~~~~~~~------------- 236 (344)
.+.+ +++++|||+||.+|+.++.+.++ +++++++++|...... ..+ .........
T Consensus 98 l~~~-~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (282)
T TIGR03343 98 LDIE-KAHLVGNSMGGATALNFALEYPD---RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFL 173 (282)
T ss_pred cCCC-CeeEEEECchHHHHHHHHHhChH---hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCc
Confidence 3445 99999999999999999998766 6899999887522110 000 000000000
Q ss_pred ----ccCHHhHHHHHHHhCCCCCC----CCCCCCCCCCC--CCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCC
Q 019193 237 ----FVTVQDRDWYWRAYLPEGAN----RDHPACNPFGP--KGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQ 306 (344)
Q Consensus 237 ----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~ 306 (344)
.......+..+......... .......++.. ....+..+ ..|+++++|++|.+++.. .++.+.+.-.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlli~G~~D~~v~~~--~~~~~~~~~~ 250 (282)
T TIGR03343 174 FDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEI-KAKTLVTWGRDDRFVPLD--HGLKLLWNMP 250 (282)
T ss_pred cCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhC-CCCEEEEEccCCCcCCch--hHHHHHHhCC
Confidence 00000000001000000000 00000000000 00011111 238999999999987632 2344444434
Q ss_pred CEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 307 DVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 307 ~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
+++++++++++|.... +..+.+.+.+.+||+
T Consensus 251 ~~~~~~i~~agH~~~~----e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 251 DAQLHVFSRCGHWAQW----EHADAFNRLVIDFLR 281 (282)
T ss_pred CCEEEEeCCCCcCCcc----cCHHHHHHHHHHHhh
Confidence 6899999999997543 456778889999986
No 53
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.53 E-value=8.6e-13 Score=113.43 Aligned_cols=187 Identities=19% Similarity=0.231 Sum_probs=125.2
Q ss_pred EEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC
Q 019193 77 LCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP 156 (344)
Q Consensus 77 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~ 156 (344)
++.+|.|+.. +.. |++||+||-+ .. ...|..+..++|+. ||+||.+|+..-....-.
T Consensus 5 ~l~v~~P~~~----------------g~y-PVv~f~~G~~----~~-~s~Ys~ll~hvASh-GyIVV~~d~~~~~~~~~~ 61 (259)
T PF12740_consen 5 PLLVYYPSSA----------------GTY-PVVLFLHGFL----LI-NSWYSQLLEHVASH-GYIVVAPDLYSIGGPDDT 61 (259)
T ss_pred CeEEEecCCC----------------CCc-CEEEEeCCcC----CC-HHHHHHHHHHHHhC-ceEEEEecccccCCCCcc
Confidence 4567777765 578 9999999933 22 23399999999997 999999994432223344
Q ss_pred chhhHHHHHHHHHHhccccc-----CCCCCCeEEEeeCCchHHHHHHHHHHhcc--cCCeeeEEEEeccccCCCCCChhh
Q 019193 157 CAYDDGWTVLKWAKSRSWLQ-----SKDSKAHIYLAGDSSGGNIVHHVALRAVE--SEVEILGNILLNPMFGGQERTESE 229 (344)
Q Consensus 157 ~~~~D~~~a~~~l~~~~~~~-----~~d~~~~i~l~G~SaGG~lA~~~a~~~~~--~~~~i~~~il~~p~~~~~~~~~~~ 229 (344)
..+++..+.++|+.+..... ..|-+ ++.|+|||.||-+|..+++.... ...++++++++.|+-.......
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s-~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~-- 138 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFS-KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ-- 138 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhcccccccccc-ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC--
Confidence 56788999999998743211 26888 99999999999999998887632 2358999999999863222100
Q ss_pred hhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCc---------ChHHHHHHHHH
Q 019193 230 KRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDL---------IQDWQLAYMEG 300 (344)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~---------l~~~~~~~~~~ 300 (344)
..|.+-.+.+ ..... ..|++|+-.+... -.+++..+.+.
T Consensus 139 ----------------------------~~P~v~~~~p--~s~~~--~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~F 186 (259)
T PF12740_consen 139 ----------------------------TEPPVLTYTP--QSFDF--SMPALVIGTGLGGEPRNPLFPPCAPAGVNYREF 186 (259)
T ss_pred ----------------------------CCCccccCcc--cccCC--CCCeEEEecccCcccccccCCCCCCCCCCHHHH
Confidence 0010100011 11110 2378888766663 24555566666
Q ss_pred HHHCCCCEEEEEeCCCceEEE
Q 019193 301 LKKAGQDVKLLYLEQATIGFY 321 (344)
Q Consensus 301 L~~~g~~~~~~~~~g~~H~f~ 321 (344)
..+...+....+..+.+|.=.
T Consensus 187 f~~~~~p~~~~v~~~~GH~d~ 207 (259)
T PF12740_consen 187 FDECKPPSWHFVAKDYGHMDF 207 (259)
T ss_pred HHhcCCCEEEEEeCCCCchHh
Confidence 666677888888999999643
No 54
>PLN02965 Probable pheophorbidase
Probab=99.53 E-value=1.8e-12 Score=114.13 Aligned_cols=214 Identities=16% Similarity=0.081 Sum_probs=115.8
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC----chhhHHHHHHHHHHhcccccCCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAYDDGWTVLKWAKSRSWLQSKDSKA 182 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~----~~~~D~~~a~~~l~~~~~~~~~d~~~ 182 (344)
-.||++||.|. +.. .|......|+++ |+.|+++|+|.......+ ..+++..+.+..+.+.. ++. .
T Consensus 4 ~~vvllHG~~~---~~~--~w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~-~- 72 (255)
T PLN02965 4 IHFVFVHGASH---GAW--CWYKLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL---PPD-H- 72 (255)
T ss_pred eEEEEECCCCC---CcC--cHHHHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc---CCC-C-
Confidence 45999999652 332 267888888766 999999999976544322 12344333333333321 111 4
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCC--CChhhhh-hC-----------C---CCccCHHhHHH
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE--RTESEKR-LD-----------G---KYFVTVQDRDW 245 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~--~~~~~~~-~~-----------~---~~~~~~~~~~~ 245 (344)
+++++|||+||.+++.++.+.++ +++++|++++...... ....... .. . .+.........
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTD---KISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPE 149 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCch---heeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHH
Confidence 89999999999999999998766 6899999886521110 0000000 00 0 00000000001
Q ss_pred HH-HHhCCCCCC----------CCCCCCC--CCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEE
Q 019193 246 YW-RAYLPEGAN----------RDHPACN--PFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLY 312 (344)
Q Consensus 246 ~~-~~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~ 312 (344)
+. ..+...... ...+... ............ ..|+++++|++|.+++.. ..+.+.+.-..+++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~vP~lvi~g~~D~~~~~~--~~~~~~~~~~~a~~~~ 226 (255)
T PLN02965 150 FVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAE-KVPRVYIKTAKDNLFDPV--RQDVMVENWPPAQTYV 226 (255)
T ss_pred HHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcC-CCCEEEEEcCCCCCCCHH--HHHHHHHhCCcceEEE
Confidence 11 111110000 0000000 000000011111 348999999999988653 3455655555678999
Q ss_pred eCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 313 LEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 313 ~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
+++++|.... +..+++.+.+.+|++
T Consensus 227 i~~~GH~~~~----e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 227 LEDSDHSAFF----SVPTTLFQYLLQAVS 251 (255)
T ss_pred ecCCCCchhh----cCHHHHHHHHHHHHH
Confidence 9999997654 345566666666655
No 55
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=6.5e-13 Score=123.89 Aligned_cols=229 Identities=17% Similarity=0.151 Sum_probs=150.5
Q ss_pred eCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCccccc--CCCchhhHHHHHHHHhhCCcEEEeeccC
Q 019193 71 DRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHS--SANSAIYDILCRRLVGTCKAVVVSVNYR 148 (344)
Q Consensus 71 ~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g--~~~~~~~~~~~~~la~~~g~~vv~~dyr 148 (344)
+++..+..-+|.|.+.+ ..++. |+++++.||.-+.- +.-..........||.. ||.|+.+|-|
T Consensus 621 ~tg~~lYgmiyKPhn~~-------------pgkkY-ptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl-Gy~Vv~IDnR 685 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQ-------------PGKKY-PTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL-GYVVVFIDNR 685 (867)
T ss_pred CCCcEEEEEEEccccCC-------------CCCCC-ceEEEEcCCCceEEeeccccceehhhhhhhhhc-ceEEEEEcCC
Confidence 34455778899999873 34578 99999999975431 11111122234477776 9999999999
Q ss_pred CCCCC--CC---------CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEec
Q 019193 149 RAPEN--RY---------PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLN 217 (344)
Q Consensus 149 ~~p~~--~~---------~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~ 217 (344)
.+-.. .| ...++|-.++++|+.+... -+|.+ ||+|-|+|.||.|+++...+.++ -.+.+|.-.
T Consensus 686 GS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~g--fidmd-rV~vhGWSYGGYLSlm~L~~~P~---IfrvAIAGa 759 (867)
T KOG2281|consen 686 GSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTG--FIDMD-RVGVHGWSYGGYLSLMGLAQYPN---IFRVAIAGA 759 (867)
T ss_pred CccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcC--cccch-heeEeccccccHHHHHHhhcCcc---eeeEEeccC
Confidence 76432 22 2346899999999998753 18999 99999999999999998888766 467888888
Q ss_pred cccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCC-CCCCCCCCCCcCCCC-CC-cEEEEEcCCCcChHH-
Q 019193 218 PMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPA-CNPFGPKGIDLVGVK-FP-KSLVVVAGLDLIQDW- 293 (344)
Q Consensus 218 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~p-P~li~~G~~D~l~~~- 293 (344)
|++++...... +.+.|.+-.......+ .+- .......+. -| .++++||--|.-+-.
T Consensus 760 pVT~W~~YDTg-----------------YTERYMg~P~~nE~gY~agS---V~~~VeklpdepnRLlLvHGliDENVHF~ 819 (867)
T KOG2281|consen 760 PVTDWRLYDTG-----------------YTERYMGYPDNNEHGYGAGS---VAGHVEKLPDEPNRLLLVHGLIDENVHFA 819 (867)
T ss_pred cceeeeeeccc-----------------chhhhcCCCccchhcccchh---HHHHHhhCCCCCceEEEEecccccchhhh
Confidence 98876542211 1111211110000000 000 000111111 22 599999999876543
Q ss_pred -HHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 294 -QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 294 -~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
.-.+..+|.++|.+.++.+||+..|+.-.- +...-.-..+..||+++
T Consensus 820 Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~---es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 820 HTSRLVSALVKAGKPYELQIFPNERHSIRNP---ESGIYYEARLLHFLQEN 867 (867)
T ss_pred hHHHHHHHHHhCCCceEEEEccccccccCCC---ccchhHHHHHHHHHhhC
Confidence 357888999999999999999999987543 23455666888888764
No 56
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.52 E-value=1.3e-12 Score=105.23 Aligned_cols=176 Identities=23% Similarity=0.350 Sum_probs=119.4
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC--CCCCCC---chhhHHHHHHHHHHhcccccC
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA--PENRYP---CAYDDGWTVLKWAKSRSWLQS 177 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~--p~~~~~---~~~~D~~~a~~~l~~~~~~~~ 177 (344)
+.. |+.|.+|--.-..|+........+++.|.++ |+.++.+|||.. .+..|. ..++|+.++++|++++..
T Consensus 26 ~~~-~iAli~HPHPl~gGtm~nkvv~~la~~l~~~-G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp--- 100 (210)
T COG2945 26 PAA-PIALICHPHPLFGGTMNNKVVQTLARALVKR-GFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHP--- 100 (210)
T ss_pred CCC-ceEEecCCCccccCccCCHHHHHHHHHHHhC-CceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCC---
Confidence 356 9999998643333444444344556666666 999999999964 334444 456999999999998743
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCC
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANR 257 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+.. ...|+|+|.|+.+|+.++.+.++ +...+.++|.+....
T Consensus 101 -~s~-~~~l~GfSFGa~Ia~~la~r~~e----~~~~is~~p~~~~~d--------------------------------- 141 (210)
T COG2945 101 -DSA-SCWLAGFSFGAYIAMQLAMRRPE----ILVFISILPPINAYD--------------------------------- 141 (210)
T ss_pred -Cch-hhhhcccchHHHHHHHHHHhccc----ccceeeccCCCCchh---------------------------------
Confidence 222 35889999999999999998765 455666666543100
Q ss_pred CCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHH-HCCCCEEEEEeCCCceEEEECCCchHHHHHHHHH
Q 019193 258 DHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLK-KAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEI 336 (344)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~-~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~ 336 (344)
.....|. -.|.++++|+.|.+++ ++++|+ +.+.+.+++..++++|.|. .+...+.+.+
T Consensus 142 -fs~l~P~-----------P~~~lvi~g~~Ddvv~----l~~~l~~~~~~~~~~i~i~~a~HFF~-----gKl~~l~~~i 200 (210)
T COG2945 142 -FSFLAPC-----------PSPGLVIQGDADDVVD----LVAVLKWQESIKITVITIPGADHFFH-----GKLIELRDTI 200 (210)
T ss_pred -hhhccCC-----------CCCceeEecChhhhhc----HHHHHHhhcCCCCceEEecCCCceec-----ccHHHHHHHH
Confidence 0001110 1189999999997655 444553 3457889999999999875 3466688888
Q ss_pred HHHHh-cc
Q 019193 337 SNFVS-CN 343 (344)
Q Consensus 337 ~~fl~-~~ 343 (344)
.+||. ++
T Consensus 201 ~~~l~~r~ 208 (210)
T COG2945 201 ADFLEDRR 208 (210)
T ss_pred HHHhhccc
Confidence 88883 44
No 57
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.51 E-value=7.1e-13 Score=118.10 Aligned_cols=212 Identities=14% Similarity=0.038 Sum_probs=113.8
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCc---hhhHHHHHHHHHHhcccccCCCCCCe
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC---AYDDGWTVLKWAKSRSWLQSKDSKAH 183 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~---~~~D~~~a~~~l~~~~~~~~~d~~~~ 183 (344)
+.||++||.|. +.. .|..++..|++ ++.|+++|+|.......+. .+++..+.+.-+.+. ++.+ +
T Consensus 26 ~plvllHG~~~---~~~--~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~-----l~~~-~ 92 (276)
T TIGR02240 26 TPLLIFNGIGA---NLE--LVFPFIEALDP--DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY-----LDYG-Q 92 (276)
T ss_pred CcEEEEeCCCc---chH--HHHHHHHHhcc--CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH-----hCcC-c
Confidence 67899999442 222 36777777764 6999999999765443221 223333333323332 2335 8
Q ss_pred EEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCC--CChhhhh-hCC-CCccCHHhHHHHHHHhCCCCCCCC-
Q 019193 184 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE--RTESEKR-LDG-KYFVTVQDRDWYWRAYLPEGANRD- 258 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~--~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 258 (344)
++|+|||+||.+|+.++.+.++ ++++++++++...... ..+.... ... ...............+.......+
T Consensus 93 ~~LvG~S~GG~va~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (276)
T TIGR02240 93 VNAIGVSWGGALAQQFAHDYPE---RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDP 169 (276)
T ss_pred eEEEEECHHHHHHHHHHHHCHH---HhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccc
Confidence 9999999999999999998776 6999999998754211 0000000 000 000000000000000000000000
Q ss_pred ------------CCCCCC-------CCC-CCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCce
Q 019193 259 ------------HPACNP-------FGP-KGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATI 318 (344)
Q Consensus 259 ------------~~~~~~-------~~~-~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H 318 (344)
...... ... ....+..+ ..|+++++|++|.+++... .+++.+.-...+++++++ +|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~v~~~~--~~~l~~~~~~~~~~~i~~-gH 245 (276)
T TIGR02240 170 ELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKI-QQPTLVLAGDDDPIIPLIN--MRLLAWRIPNAELHIIDD-GH 245 (276)
T ss_pred hhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcC-CCCEEEEEeCCCCcCCHHH--HHHHHHhCCCCEEEEEcC-CC
Confidence 000000 000 00011111 3489999999999886532 244444334567888886 99
Q ss_pred EEEECCCchHHHHHHHHHHHHHhc
Q 019193 319 GFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 319 ~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
... .+..+++.+.+.+|+++
T Consensus 246 ~~~----~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 246 LFL----ITRAEAVAPIIMKFLAE 265 (276)
T ss_pred chh----hccHHHHHHHHHHHHHH
Confidence 654 24567899999999875
No 58
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.50 E-value=1.9e-12 Score=119.82 Aligned_cols=216 Identities=15% Similarity=0.087 Sum_probs=116.6
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC----chhhHHHHHHHHHHhcccccCCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAYDDGWTVLKWAKSRSWLQSKDSKA 182 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~----~~~~D~~~a~~~l~~~~~~~~~d~~~ 182 (344)
|.||++||.|. +. ..|..++..|++ ++.|+.+|++.......+ ..+++..+.+.-+.+. ...+
T Consensus 89 p~lvllHG~~~---~~--~~w~~~~~~L~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~-----l~~~- 155 (360)
T PLN02679 89 PPVLLVHGFGA---SI--PHWRRNIGVLAK--NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE-----VVQK- 155 (360)
T ss_pred CeEEEECCCCC---CH--HHHHHHHHHHhc--CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH-----hcCC-
Confidence 78999999552 22 236777777764 799999999966544322 1223333222222222 2335
Q ss_pred eEEEeeCCchHHHHHHHHHH-hcccCCeeeEEEEeccccCCCCCC--hh-hhhh--C---------CCCcc---------
Q 019193 183 HIYLAGDSSGGNIVHHVALR-AVESEVEILGNILLNPMFGGQERT--ES-EKRL--D---------GKYFV--------- 238 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~-~~~~~~~i~~~il~~p~~~~~~~~--~~-~~~~--~---------~~~~~--------- 238 (344)
+++|+|||+||.+++.++.. .++ +++++|++++........ .. .... . ..+..
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~---rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRD---LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVK 232 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChh---hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhc
Confidence 89999999999999887764 344 699999998753221100 00 0000 0 00000
Q ss_pred CHHhHHHHHHHhCCCCCCCC------------CC-CC----CCCC-CCC-CCcCCCC--CCcEEEEEcCCCcChHHHH--
Q 019193 239 TVQDRDWYWRAYLPEGANRD------------HP-AC----NPFG-PKG-IDLVGVK--FPKSLVVVAGLDLIQDWQL-- 295 (344)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~------------~~-~~----~~~~-~~~-~~~~~~~--~pP~li~~G~~D~l~~~~~-- 295 (344)
.....+.+............ .+ .. .... ... .....+. ..|+||++|++|.+++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~ 312 (360)
T PLN02679 233 QRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPV 312 (360)
T ss_pred CHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhH
Confidence 00001111111000000000 00 00 0000 000 0001111 3489999999998876432
Q ss_pred -HHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 296 -AYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 296 -~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
.+.+.+.+.-.++++++++|++|... .+..+++.+.+.+||.+
T Consensus 313 ~~~~~~l~~~ip~~~l~~i~~aGH~~~----~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 313 GKYFSSLPSQLPNVTLYVLEGVGHCPH----DDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred HHHHHhhhccCCceEEEEcCCCCCCcc----ccCHHHHHHHHHHHHHh
Confidence 34455655555789999999999643 35578899999999975
No 59
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.49 E-value=1.3e-12 Score=117.51 Aligned_cols=98 Identities=16% Similarity=0.237 Sum_probs=68.8
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCc---hhhHHHHHHHHHHhcccccCCCCCCe
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC---AYDDGWTVLKWAKSRSWLQSKDSKAH 183 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~---~~~D~~~a~~~l~~~~~~~~~d~~~~ 183 (344)
|.||++||.+ ++. ..|..++..|+++ + .|+++|.|.....+.+. .+++..+.+..+.+. ++.+ +
T Consensus 28 ~~vvllHG~~---~~~--~~w~~~~~~L~~~-~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~-----l~~~-~ 94 (295)
T PRK03592 28 DPIVFLHGNP---TSS--YLWRNIIPHLAGL-G-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA-----LGLD-D 94 (295)
T ss_pred CEEEEECCCC---CCH--HHHHHHHHHHhhC-C-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCCC-C
Confidence 7799999954 233 2367888888876 4 99999999765443322 233332223333332 2335 8
Q ss_pred EEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 184 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
+.|+|||+||.+|+.++.+.++ ++++++++++..
T Consensus 95 ~~lvGhS~Gg~ia~~~a~~~p~---~v~~lil~~~~~ 128 (295)
T PRK03592 95 VVLVGHDWGSALGFDWAARHPD---RVRGIAFMEAIV 128 (295)
T ss_pred eEEEEECHHHHHHHHHHHhChh---heeEEEEECCCC
Confidence 9999999999999999998876 699999999753
No 60
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.49 E-value=3.7e-12 Score=113.09 Aligned_cols=101 Identities=19% Similarity=0.213 Sum_probs=67.2
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC------chhhHHHHHHHHHHhcccccCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP------CAYDDGWTVLKWAKSRSWLQSKDS 180 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~------~~~~D~~~a~~~l~~~~~~~~~d~ 180 (344)
|.||++||++. +.. ..+.. ...+..+.|+.|+.+|+|.......+ ..+++..+.+..+.+. .+.
T Consensus 26 ~~vl~~hG~~g---~~~-~~~~~-~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (288)
T TIGR01250 26 IKLLLLHGGPG---MSH-EYLEN-LRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK-----LGL 95 (288)
T ss_pred CeEEEEcCCCC---ccH-HHHHH-HHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH-----cCC
Confidence 77999999642 222 21333 34444444999999999975443322 1234444444444443 344
Q ss_pred CCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 181 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 181 ~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
. +++|+|||+||.+|+.++.+.++ ++++++++++...
T Consensus 96 ~-~~~liG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 132 (288)
T TIGR01250 96 D-KFYLLGHSWGGMLAQEYALKYGQ---HLKGLIISSMLDS 132 (288)
T ss_pred C-cEEEEEeehHHHHHHHHHHhCcc---ccceeeEeccccc
Confidence 5 89999999999999999988765 6889998887543
No 61
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.48 E-value=1.5e-12 Score=113.04 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=68.2
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC---chhhHHHHHHHHHHhcccccCCCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP---CAYDDGWTVLKWAKSRSWLQSKDS 180 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~---~~~~D~~~a~~~l~~~~~~~~~d~ 180 (344)
.. |+||++||.|. +.. .|..++..|. + |+.|+++|+|...+...+ ...+|..+.+..+.+. ++.
T Consensus 12 ~~-~~li~~hg~~~---~~~--~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~-----~~~ 78 (251)
T TIGR02427 12 GA-PVLVFINSLGT---DLR--MWDPVLPALT-P-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH-----LGI 78 (251)
T ss_pred CC-CeEEEEcCccc---chh--hHHHHHHHhh-c-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCC
Confidence 45 99999999542 222 2566666665 4 899999999976443322 2334444444444443 344
Q ss_pred CCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 181 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 181 ~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
+ +++++|||+||.+++.++.+.++ ++++++++++..
T Consensus 79 ~-~v~liG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~ 114 (251)
T TIGR02427 79 E-RAVFCGLSLGGLIAQGLAARRPD---RVRALVLSNTAA 114 (251)
T ss_pred C-ceEEEEeCchHHHHHHHHHHCHH---HhHHHhhccCcc
Confidence 6 89999999999999999887654 588888877653
No 62
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.47 E-value=1.8e-12 Score=116.16 Aligned_cols=98 Identities=22% Similarity=0.272 Sum_probs=72.6
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC----chhhHHHHHHHHHHhcccccCCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAYDDGWTVLKWAKSRSWLQSKDSKA 182 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~----~~~~D~~~a~~~l~~~~~~~~~d~~~ 182 (344)
|.||++||.+ . ....|..+...|.+ ++.|+++|+|.......+ ..+++..+.+.++.+. .+.+
T Consensus 35 ~~iv~lHG~~----~-~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~-----~~~~- 101 (286)
T PRK03204 35 PPILLCHGNP----T-WSFLYRDIIVALRD--RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDH-----LGLD- 101 (286)
T ss_pred CEEEEECCCC----c-cHHHHHHHHHHHhC--CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHH-----hCCC-
Confidence 7899999954 1 22235666777754 699999999976543322 3357777777777765 3446
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
+++++|||+||.+|+.++...++ +++++|++++..
T Consensus 102 ~~~lvG~S~Gg~va~~~a~~~p~---~v~~lvl~~~~~ 136 (286)
T PRK03204 102 RYLSMGQDWGGPISMAVAVERAD---RVRGVVLGNTWF 136 (286)
T ss_pred CEEEEEECccHHHHHHHHHhChh---heeEEEEECccc
Confidence 89999999999999999988766 699999887754
No 63
>PRK11071 esterase YqiA; Provisional
Probab=99.47 E-value=1.6e-12 Score=109.06 Aligned_cols=178 Identities=17% Similarity=0.137 Sum_probs=102.2
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhh-CCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGT-CKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIY 185 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~-~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~ 185 (344)
|.||++||-+ ++........+...+++. .++.|+.+|.+..| ++..+.+..+.+. .+.+ +++
T Consensus 2 p~illlHGf~---ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~~-----~~~~-~~~ 64 (190)
T PRK11071 2 STLLYLHGFN---SSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVLE-----HGGD-PLG 64 (190)
T ss_pred CeEEEECCCC---CCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHHH-----cCCC-CeE
Confidence 7899999933 233321011233344332 37999999988542 3555555555554 2345 899
Q ss_pred EeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCC---------CccCHHhHHHHHHHhCCCCCC
Q 019193 186 LAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGK---------YFVTVQDRDWYWRAYLPEGAN 256 (344)
Q Consensus 186 l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 256 (344)
++|+|+||.+|+.++.+.+. .+++++|..+... ......+. ..+.....+.... +
T Consensus 65 lvG~S~Gg~~a~~~a~~~~~------~~vl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~------ 128 (190)
T PRK11071 65 LVGSSLGGYYATWLSQCFML------PAVVVNPAVRPFE---LLTDYLGENENPYTGQQYVLESRHIYDLKV-M------ 128 (190)
T ss_pred EEEECHHHHHHHHHHHHcCC------CEEEECCCCCHHH---HHHHhcCCcccccCCCcEEEcHHHHHHHHh-c------
Confidence 99999999999999987642 3578888665211 11110000 0111111111100 0
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHH
Q 019193 257 RDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEI 336 (344)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~ 336 (344)
.+ ..+.. -.|++|+||+.|.++|.... .++.+ .++...++|++|.|.. .++.++.+
T Consensus 129 ------~~-----~~i~~--~~~v~iihg~~De~V~~~~a--~~~~~---~~~~~~~~ggdH~f~~------~~~~~~~i 184 (190)
T PRK11071 129 ------QI-----DPLES--PDLIWLLQQTGDEVLDYRQA--VAYYA---ACRQTVEEGGNHAFVG------FERYFNQI 184 (190)
T ss_pred ------CC-----ccCCC--hhhEEEEEeCCCCcCCHHHH--HHHHH---hcceEEECCCCcchhh------HHHhHHHH
Confidence 00 00110 22799999999999876432 33322 2366788999999842 36788899
Q ss_pred HHHHh
Q 019193 337 SNFVS 341 (344)
Q Consensus 337 ~~fl~ 341 (344)
.+|+.
T Consensus 185 ~~fl~ 189 (190)
T PRK11071 185 VDFLG 189 (190)
T ss_pred HHHhc
Confidence 99975
No 64
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.46 E-value=2.6e-12 Score=111.16 Aligned_cols=96 Identities=14% Similarity=0.086 Sum_probs=66.4
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 186 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l 186 (344)
|.||++||.|- +.. .|..+...|++ ++.|+.+|+|......... ..+..+..+.+.+. ++ + ++++
T Consensus 5 ~~iv~~HG~~~---~~~--~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~-----~~-~-~~~l 69 (245)
T TIGR01738 5 VHLVLIHGWGM---NAE--VFRCLDEELSA--HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQ-----AP-D-PAIW 69 (245)
T ss_pred ceEEEEcCCCC---chh--hHHHHHHhhcc--CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHh-----CC-C-CeEE
Confidence 77999999542 322 36677777764 7999999999755433221 12344444444443 22 5 8999
Q ss_pred eeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 187 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 187 ~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
+|||+||.+++.++.+.++ ++.++|++++..
T Consensus 70 vG~S~Gg~~a~~~a~~~p~---~v~~~il~~~~~ 100 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPD---RVRALVTVASSP 100 (245)
T ss_pred EEEcHHHHHHHHHHHHCHH---hhheeeEecCCc
Confidence 9999999999999988765 588888887653
No 65
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.45 E-value=7.2e-12 Score=116.37 Aligned_cols=209 Identities=16% Similarity=0.049 Sum_probs=117.2
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC---CCchhhHHHHHHHHHHhcccccCCCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR---YPCAYDDGWTVLKWAKSRSWLQSKDS 180 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~---~~~~~~D~~~a~~~l~~~~~~~~~d~ 180 (344)
.. |.||++||.|. +... |..+...|.+ ++.|+++|+|...... -...++++.+.+..+.+. ++.
T Consensus 130 ~~-~~vl~~HG~~~---~~~~--~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~-----~~~ 196 (371)
T PRK14875 130 DG-TPVVLIHGFGG---DLNN--WLFNHAALAA--GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA-----LGI 196 (371)
T ss_pred CC-CeEEEECCCCC---ccch--HHHHHHHHhc--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh-----cCC
Confidence 35 88999999542 3322 5666777765 5999999999765432 123345555555555544 456
Q ss_pred CCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhh-hhC-----------------CCCccCHHh
Q 019193 181 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEK-RLD-----------------GKYFVTVQD 242 (344)
Q Consensus 181 ~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~-~~~-----------------~~~~~~~~~ 242 (344)
. +++|+|||+||.+|+.++...++ ++.++++++|............ .+. .........
T Consensus 197 ~-~~~lvG~S~Gg~~a~~~a~~~~~---~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (371)
T PRK14875 197 E-RAHLVGHSMGGAVALRLAARAPQ---RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQM 272 (371)
T ss_pred c-cEEEEeechHHHHHHHHHHhCch---heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHH
Confidence 7 99999999999999998887654 6899999987632221111000 000 000000000
Q ss_pred HHHHHHHhC-C-----------CCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEE
Q 019193 243 RDWYWRAYL-P-----------EGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKL 310 (344)
Q Consensus 243 ~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~ 310 (344)
.+..+.... . ..........+. ...+... ..|+++++|+.|.+++... .+.+ ...+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~i-~~Pvlii~g~~D~~vp~~~--~~~l---~~~~~~ 342 (371)
T PRK14875 273 VEDLLKYKRLDGVDDALRALADALFAGGRQRVDL----RDRLASL-AIPVLVIWGEQDRIIPAAH--AQGL---PDGVAV 342 (371)
T ss_pred HHHHHHHhccccHHHHHHHHHHHhccCcccchhH----HHHHhcC-CCCEEEEEECCCCccCHHH--Hhhc---cCCCeE
Confidence 000000000 0 000000000000 0011111 3489999999999876432 2333 235789
Q ss_pred EEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 311 LYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 311 ~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
.++++++|.... +..+++.+.+.+||+++
T Consensus 343 ~~~~~~gH~~~~----e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 343 HVLPGAGHMPQM----EAAADVNRLLAEFLGKA 371 (371)
T ss_pred EEeCCCCCChhh----hCHHHHHHHHHHHhccC
Confidence 999999996543 34677888888999764
No 66
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.44 E-value=2.4e-12 Score=108.92 Aligned_cols=234 Identities=14% Similarity=0.106 Sum_probs=141.5
Q ss_pred CCCceEEEEEEeCCCC--eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhh
Q 019193 60 VDGVFSFDVIVDRGTN--LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGT 137 (344)
Q Consensus 60 ~~~~~~~~~~~~~~~~--~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~ 137 (344)
...++..++++.+..+ |..++..|+.. +++. |.||.+||-+...| .. +. + -.++..
T Consensus 51 ~~~ve~ydvTf~g~~g~rI~gwlvlP~~~---------------~~~~-P~vV~fhGY~g~~g--~~--~~-~-l~wa~~ 108 (321)
T COG3458 51 LPRVEVYDVTFTGYGGARIKGWLVLPRHE---------------KGKL-PAVVQFHGYGGRGG--EW--HD-M-LHWAVA 108 (321)
T ss_pred CCceEEEEEEEeccCCceEEEEEEeeccc---------------CCcc-ceEEEEeeccCCCC--Cc--cc-c-cccccc
Confidence 4578889999988665 78888899876 3678 99999999332111 11 11 1 145555
Q ss_pred CCcEEEeeccCCC----------CCC-CCC-----------------chhhHHHHHHHHHHhcccccCCCCCCeEEEeeC
Q 019193 138 CKAVVVSVNYRRA----------PEN-RYP-----------------CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGD 189 (344)
Q Consensus 138 ~g~~vv~~dyr~~----------p~~-~~~-----------------~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~ 189 (344)
||.|+.+|.|.. |+. ..| ....|++.+++-+.+... +|.+ ||.+.|.
T Consensus 109 -Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~---vde~-Ri~v~G~ 183 (321)
T COG3458 109 -GYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDE---VDEE-RIGVTGG 183 (321)
T ss_pred -ceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCc---cchh-heEEecc
Confidence 999999999932 222 222 234688889888887765 9999 9999999
Q ss_pred CchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCC--CCCCCCCCCCC
Q 019193 190 SSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGAN--RDHPACNPFGP 267 (344)
Q Consensus 190 SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 267 (344)
|.||+||+.++...+ +|+++++.+|++....+.-.. ....+. .....+.+..-+.... ....+.... .
T Consensus 184 SqGGglalaaaal~~----rik~~~~~~Pfl~df~r~i~~--~~~~~y---dei~~y~k~h~~~e~~v~~TL~yfD~~-n 253 (321)
T COG3458 184 SQGGGLALAAAALDP----RIKAVVADYPFLSDFPRAIEL--ATEGPY---DEIQTYFKRHDPKEAEVFETLSYFDIV-N 253 (321)
T ss_pred ccCchhhhhhhhcCh----hhhcccccccccccchhheee--cccCcH---HHHHHHHHhcCchHHHHHHHHhhhhhh-h
Confidence 999999998776533 699999999998754432211 000000 1111111111100000 000000000 0
Q ss_pred CCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 268 KGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 268 ~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
.+..++ -|+|+..|-.|++++.+..|+..-+-. .+.++.+|+.-.|.-. +. -..+++..|++.
T Consensus 254 ~A~RiK----~pvL~svgL~D~vcpPstqFA~yN~l~-~~K~i~iy~~~aHe~~--p~-----~~~~~~~~~l~~ 316 (321)
T COG3458 254 LAARIK----VPVLMSVGLMDPVCPPSTQFAAYNALT-TSKTIEIYPYFAHEGG--PG-----FQSRQQVHFLKI 316 (321)
T ss_pred HHHhhc----cceEEeecccCCCCCChhhHHHhhccc-CCceEEEeeccccccC--cc-----hhHHHHHHHHHh
Confidence 011222 389999999999998887665543322 2457888887778542 11 133456667654
No 67
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.43 E-value=9.8e-12 Score=117.61 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=67.0
Q ss_pred CcccEEEEEcCCcccccCCCchhhHH-HHHHHHh--hCCcEEEeeccCCCCCCCCC----chhhHHHHHH-HHHHhcccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDI-LCRRLVG--TCKAVVVSVNYRRAPENRYP----CAYDDGWTVL-KWAKSRSWL 175 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~-~~~~la~--~~g~~vv~~dyr~~p~~~~~----~~~~D~~~a~-~~l~~~~~~ 175 (344)
.. |.||++||.+. +.. .|.. +...+++ +.++.|+++|+|.....+-+ -.+++..+.+ ..+.+.
T Consensus 200 ~k-~~VVLlHG~~~---s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~--- 270 (481)
T PLN03087 200 AK-EDVLFIHGFIS---SSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLER--- 270 (481)
T ss_pred CC-CeEEEECCCCc---cHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHH---
Confidence 34 78999999652 322 2432 3345542 23899999999975433222 1234443333 233333
Q ss_pred cCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 176 QSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 176 ~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
.+.+ ++.++|||+||.+|+.++.+.++ +++++++++|..
T Consensus 271 --lg~~-k~~LVGhSmGG~iAl~~A~~~Pe---~V~~LVLi~~~~ 309 (481)
T PLN03087 271 --YKVK-SFHIVAHSLGCILALALAVKHPG---AVKSLTLLAPPY 309 (481)
T ss_pred --cCCC-CEEEEEECHHHHHHHHHHHhChH---hccEEEEECCCc
Confidence 2345 89999999999999999998876 699999998643
No 68
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.43 E-value=1.1e-11 Score=108.03 Aligned_cols=101 Identities=18% Similarity=0.128 Sum_probs=65.7
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 186 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l 186 (344)
|+||++||.|. +. ..|..+...+ + ++.|+++|+|.......+.. .+.....+++.+.... .+.+ ++++
T Consensus 3 p~vvllHG~~~---~~--~~w~~~~~~l--~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~--~~~~-~~~l 70 (242)
T PRK11126 3 PWLVFLHGLLG---SG--QDWQPVGEAL--P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQS--YNIL-PYWL 70 (242)
T ss_pred CEEEEECCCCC---Ch--HHHHHHHHHc--C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHH--cCCC-CeEE
Confidence 78999999652 22 2367777766 3 79999999997644332221 1222222333222111 2335 8999
Q ss_pred eeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 187 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 187 ~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
+|||+||.+|+.++.+.++. ++++++++++...
T Consensus 71 vG~S~Gg~va~~~a~~~~~~--~v~~lvl~~~~~~ 103 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAG--GLCGLIVEGGNPG 103 (242)
T ss_pred EEECHHHHHHHHHHHhCCcc--cccEEEEeCCCCC
Confidence 99999999999999986442 4889998876543
No 69
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.43 E-value=1.5e-12 Score=118.65 Aligned_cols=234 Identities=15% Similarity=0.096 Sum_probs=126.6
Q ss_pred ceEEEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEE
Q 019193 63 VFSFDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVV 142 (344)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v 142 (344)
++..++.+.+ ..++..++.|.+. ++. |+||.+=|- .+...+.+..+...++.+ |+++
T Consensus 165 i~~v~iP~eg-~~I~g~LhlP~~~----------------~p~-P~VIv~gGl----Ds~qeD~~~l~~~~l~~r-GiA~ 221 (411)
T PF06500_consen 165 IEEVEIPFEG-KTIPGYLHLPSGE----------------KPY-PTVIVCGGL----DSLQEDLYRLFRDYLAPR-GIAM 221 (411)
T ss_dssp EEEEEEEETT-CEEEEEEEESSSS----------------S-E-EEEEEE--T----TS-GGGGHHHHHCCCHHC-T-EE
T ss_pred cEEEEEeeCC-cEEEEEEEcCCCC----------------CCC-CEEEEeCCc----chhHHHHHHHHHHHHHhC-CCEE
Confidence 3334444544 5688888898854 577 988887662 233444344444456666 9999
Q ss_pred EeeccCCCCCC---CCCchh-hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 143 VSVNYRRAPEN---RYPCAY-DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 143 v~~dyr~~p~~---~~~~~~-~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
+.+|.+...+. ++.... .-..++++|+.+.+. +|.+ ||+++|.|+||+.|..+|...+. +++++|.+.|
T Consensus 222 LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~---VD~~-RV~~~G~SfGGy~AvRlA~le~~---RlkavV~~Ga 294 (411)
T PF06500_consen 222 LTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPW---VDHT-RVGAWGFSFGGYYAVRLAALEDP---RLKAVVALGA 294 (411)
T ss_dssp EEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTT---EEEE-EEEEEEETHHHHHHHHHHHHTTT---T-SEEEEES-
T ss_pred EEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCc---cChh-heEEEEeccchHHHHHHHHhccc---ceeeEeeeCc
Confidence 99999865432 222222 224678899988876 9999 99999999999999998876544 7999999999
Q ss_pred ccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCC------CCCCCCCCCCCCCcCCCC-CCcEEEEEcCCCcCh
Q 019193 219 MFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRD------HPACNPFGPKGIDLVGVK-FPKSLVVVAGLDLIQ 291 (344)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~pP~li~~G~~D~l~ 291 (344)
.+..-... .......|.+ ..+.+ ...++...... ....+.... .-+..-+ ..|+|.+.|++|++.
T Consensus 295 ~vh~~ft~--~~~~~~~P~m---y~d~L-A~rlG~~~~~~~~l~~el~~~SLk~q--GlL~~rr~~~plL~i~~~~D~v~ 366 (411)
T PF06500_consen 295 PVHHFFTD--PEWQQRVPDM---YLDVL-ASRLGMAAVSDESLRGELNKFSLKTQ--GLLSGRRCPTPLLAINGEDDPVS 366 (411)
T ss_dssp --SCGGH---HHHHTTS-HH---HHHHH-HHHCT-SCE-HHHHHHHGGGGSTTTT--TTTTSS-BSS-EEEEEETT-SSS
T ss_pred hHhhhhcc--HHHHhcCCHH---HHHHH-HHHhCCccCCHHHHHHHHHhcCcchh--ccccCCCCCcceEEeecCCCCCC
Confidence 76432211 1222222221 11111 11111111000 001111100 0010001 238999999999998
Q ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCc-eEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 292 DWQLAYMEGLKKAGQDVKLLYLEQAT-IGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 292 ~~~~~~~~~L~~~g~~~~~~~~~g~~-H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
|.... +.+...+.+-+...++..+ | ....+.+..+.+||+++|
T Consensus 367 P~eD~--~lia~~s~~gk~~~~~~~~~~--------~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 367 PIEDS--RLIAESSTDGKALRIPSKPLH--------MGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp -HHHH--HHHHHTBTT-EEEEE-SSSHH--------HHHHHHHHHHHHHHHHHH
T ss_pred CHHHH--HHHHhcCCCCceeecCCCccc--------cchHHHHHHHHHHHHHhc
Confidence 87654 4455555555666666444 5 346779999999998764
No 70
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.41 E-value=7.4e-13 Score=112.94 Aligned_cols=97 Identities=25% Similarity=0.288 Sum_probs=69.6
Q ss_pred EEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC-----chhhHHHHHHHHHHhcccccCCCCCCe
Q 019193 109 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-----CAYDDGWTVLKWAKSRSWLQSKDSKAH 183 (344)
Q Consensus 109 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~-----~~~~D~~~a~~~l~~~~~~~~~d~~~~ 183 (344)
||++||.|. +. ..|..++..|+ + |+.|+++|+|.......+ ...+|..+.+..+.+. +..+ +
T Consensus 1 vv~~hG~~~---~~--~~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~-----~~~~-~ 67 (228)
T PF12697_consen 1 VVFLHGFGG---SS--ESWDPLAEALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA-----LGIK-K 67 (228)
T ss_dssp EEEE-STTT---TG--GGGHHHHHHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH-----TTTS-S
T ss_pred eEEECCCCC---CH--HHHHHHHHHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc-----cccc-c
Confidence 799999663 33 33788888885 5 999999999976544332 2234443333333333 2335 8
Q ss_pred EEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 184 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
++|+|||+||.+++.++.+.++ +++++++++|...
T Consensus 68 ~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 68 VILVGHSMGGMIALRLAARYPD---RVKGLVLLSPPPP 102 (228)
T ss_dssp EEEEEETHHHHHHHHHHHHSGG---GEEEEEEESESSS
T ss_pred cccccccccccccccccccccc---ccccceeeccccc
Confidence 9999999999999999988776 7999999999875
No 71
>PRK06489 hypothetical protein; Provisional
Probab=99.40 E-value=8.5e-12 Score=115.50 Aligned_cols=99 Identities=16% Similarity=0.191 Sum_probs=63.6
Q ss_pred cEEEEEcCCcccccCCCchhh-HHHHHHHH-------hhCCcEEEeeccCCCCCCCCC----------chhhHHHH-HHH
Q 019193 107 PVIIFFHGGSFAHSSANSAIY-DILCRRLV-------GTCKAVVVSVNYRRAPENRYP----------CAYDDGWT-VLK 167 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~-~~~~~~la-------~~~g~~vv~~dyr~~p~~~~~----------~~~~D~~~-a~~ 167 (344)
|.||++||++. +... ++ ..+...+. .+ ++.|+++|+|.......+ -.++|..+ ...
T Consensus 70 pplvllHG~~~---~~~~-~~~~~~~~~l~~~~~~l~~~-~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~ 144 (360)
T PRK06489 70 NAVLVLHGTGG---SGKS-FLSPTFAGELFGPGQPLDAS-KYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYR 144 (360)
T ss_pred CeEEEeCCCCC---chhh-hccchhHHHhcCCCCccccc-CCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHH
Confidence 88999999652 2211 11 13333331 33 799999999975443322 12344443 233
Q ss_pred HHHhcccccCCCCCCeE-EEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 168 WAKSRSWLQSKDSKAHI-YLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 168 ~l~~~~~~~~~d~~~~i-~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
++.+. .+.+ ++ +|+|+|+||.+|+.++.+.++ +++++|++++.
T Consensus 145 ~l~~~-----lgi~-~~~~lvG~SmGG~vAl~~A~~~P~---~V~~LVLi~s~ 188 (360)
T PRK06489 145 LVTEG-----LGVK-HLRLILGTSMGGMHAWMWGEKYPD---FMDALMPMASQ 188 (360)
T ss_pred HHHHh-----cCCC-ceeEEEEECHHHHHHHHHHHhCch---hhheeeeeccC
Confidence 34343 2234 77 489999999999999999877 69999988764
No 72
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.40 E-value=1.2e-11 Score=105.02 Aligned_cols=120 Identities=18% Similarity=0.244 Sum_probs=82.0
Q ss_pred eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC--CCC
Q 019193 76 LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA--PEN 153 (344)
Q Consensus 76 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~--p~~ 153 (344)
+.+++|.|++.. ..+. |+||++||++.. ........-...+|++.|++|+.|+-... +..
T Consensus 1 l~Y~lYvP~~~~--------------~~~~-PLVv~LHG~~~~---a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~ 62 (220)
T PF10503_consen 1 LSYRLYVPPGAP--------------RGPV-PLVVVLHGCGQS---AEDFAAGSGWNALADREGFIVVYPEQSRRANPQG 62 (220)
T ss_pred CcEEEecCCCCC--------------CCCC-CEEEEeCCCCCC---HHHHHhhcCHHHHhhcCCeEEEcccccccCCCCC
Confidence 457899998652 2467 999999997642 21100011234789999999998874321 111
Q ss_pred CC----------CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 154 RY----------PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 154 ~~----------~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
.+ ......+.+.++++..+ +.+|++ ||++.|.|+||.++..++..+++ .++++...++..
T Consensus 63 cw~w~~~~~~~g~~d~~~i~~lv~~v~~~---~~iD~~-RVyv~G~S~Gg~ma~~la~~~pd---~faa~a~~sG~~ 132 (220)
T PF10503_consen 63 CWNWFSDDQQRGGGDVAFIAALVDYVAAR---YNIDPS-RVYVTGLSNGGMMANVLACAYPD---LFAAVAVVSGVP 132 (220)
T ss_pred cccccccccccCccchhhHHHHHHhHhhh---cccCCC-ceeeEEECHHHHHHHHHHHhCCc---cceEEEeecccc
Confidence 11 12234455667777655 459999 99999999999999999998887 688887777654
No 73
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.38 E-value=2.3e-10 Score=101.77 Aligned_cols=101 Identities=16% Similarity=0.220 Sum_probs=70.0
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCC----CchhhHH-HHHHHHHHhcccccCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY----PCAYDDG-WTVLKWAKSRSWLQSK 178 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~----~~~~~D~-~~a~~~l~~~~~~~~~ 178 (344)
.. |.||++||.+. +.. .|..+...|.++ ||.|+.+|++......- ...++|. ....+++.+..
T Consensus 17 ~~-p~vvliHG~~~---~~~--~w~~~~~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~----- 84 (273)
T PLN02211 17 QP-PHFVLIHGISG---GSW--CWYKIRCLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP----- 84 (273)
T ss_pred CC-CeEEEECCCCC---CcC--cHHHHHHHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC-----
Confidence 45 89999999653 232 277888888876 99999999996543211 1233333 33334443321
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 179 DSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 179 d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
..+ +++|+|||+||.++..++.+.++ +++++|++++..
T Consensus 85 ~~~-~v~lvGhS~GG~v~~~~a~~~p~---~v~~lv~~~~~~ 122 (273)
T PLN02211 85 ENE-KVILVGHSAGGLSVTQAIHRFPK---KICLAVYVAATM 122 (273)
T ss_pred CCC-CEEEEEECchHHHHHHHHHhChh---heeEEEEecccc
Confidence 125 89999999999999999887655 689999998754
No 74
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.37 E-value=1.1e-11 Score=109.02 Aligned_cols=105 Identities=18% Similarity=0.077 Sum_probs=74.8
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccC--CCCCCeE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQS--KDSKAHI 184 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~--~d~~~~i 184 (344)
..+|++||-|- |. ..|-.-...|+. ...|.++|........-|..-.|-..+..|+.+..+++. .+.+ ++
T Consensus 91 ~plVliHGyGA--g~---g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~-Km 162 (365)
T KOG4409|consen 91 TPLVLIHGYGA--GL---GLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLE-KM 162 (365)
T ss_pred CcEEEEeccch--hH---HHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCc-ce
Confidence 66899999441 11 223444556665 789999998876666555555555555556555443333 3445 99
Q ss_pred EEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCC
Q 019193 185 YLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 222 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~ 222 (344)
+|+|||+||+||..+|+++++ ++.-+||.+||--.
T Consensus 163 ilvGHSfGGYLaa~YAlKyPe---rV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 163 ILVGHSFGGYLAAKYALKYPE---RVEKLILVSPWGFP 197 (365)
T ss_pred eEeeccchHHHHHHHHHhChH---hhceEEEecccccc
Confidence 999999999999999999988 69999999998543
No 75
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.37 E-value=5.2e-11 Score=104.83 Aligned_cols=212 Identities=10% Similarity=0.001 Sum_probs=114.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 186 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l 186 (344)
|.||++||.|. +.. .|..+...|.+ .+.|+.+|+|.......+.. .++.+..+.+.+. ..+ ++.+
T Consensus 14 ~~ivllHG~~~---~~~--~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~l~~~------~~~-~~~l 78 (256)
T PRK10349 14 VHLVLLHGWGL---NAE--VWRCIDEELSS--HFTLHLVDLPGFGRSRGFGA-LSLADMAEAVLQQ------APD-KAIW 78 (256)
T ss_pred CeEEEECCCCC---Chh--HHHHHHHHHhc--CCEEEEecCCCCCCCCCCCC-CCHHHHHHHHHhc------CCC-CeEE
Confidence 56999999542 322 26777777764 69999999997654433321 2233334444432 235 8999
Q ss_pred eeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCC--CCCChh-----hhhhCCC-CccCHHhHHHHHHH-hCCCCC--
Q 019193 187 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG--QERTES-----EKRLDGK-YFVTVQDRDWYWRA-YLPEGA-- 255 (344)
Q Consensus 187 ~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~--~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~-~~~~~~-- 255 (344)
+|||+||.+|+.++.+.++ ++++++++.+.... ...... ....... ........+.+... ......
T Consensus 79 vGhS~Gg~ia~~~a~~~p~---~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T PRK10349 79 LGWSLGGLVASQIALTHPE---RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETAR 155 (256)
T ss_pred EEECHHHHHHHHHHHhChH---hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHH
Confidence 9999999999999987665 68999988763221 100000 0000000 00000001111000 000000
Q ss_pred -----------CCCCCCCCCC------CCCCCCcCCCC--CCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCC
Q 019193 256 -----------NRDHPACNPF------GPKGIDLVGVK--FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQA 316 (344)
Q Consensus 256 -----------~~~~~~~~~~------~~~~~~~~~~~--~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~ 316 (344)
....+..... .......+.+. ..|++|++|+.|.+++.. ..+.+.+.-...++.+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~--~~~~~~~~i~~~~~~~i~~~ 233 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRK--VVPMLDKLWPHSESYIFAKA 233 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHH--HHHHHHHhCCCCeEEEeCCC
Confidence 0000000000 00000001111 348999999999987643 33555555456799999999
Q ss_pred ceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 317 TIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 317 ~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
+|.... +..+.+.+.+.+|-++
T Consensus 234 gH~~~~----e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 234 AHAPFI----SHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCccc----cCHHHHHHHHHHHhcc
Confidence 996543 4567777777777543
No 76
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.36 E-value=4.4e-11 Score=101.00 Aligned_cols=122 Identities=22% Similarity=0.347 Sum_probs=94.1
Q ss_pred CeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccC-CCCCC
Q 019193 75 NLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR-RAPEN 153 (344)
Q Consensus 75 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr-~~p~~ 153 (344)
..++.|+.|..+ +.. |+|+|+|| |.. ....|..+.+.++.. |++|++++.- +.+ -
T Consensus 32 PkpLlI~tP~~~----------------G~y-PVilF~HG--~~l---~ns~Ys~lL~HIASH-GfIVVAPQl~~~~~-p 87 (307)
T PF07224_consen 32 PKPLLIVTPSEA----------------GTY-PVILFLHG--FNL---YNSFYSQLLAHIASH-GFIVVAPQLYTLFP-P 87 (307)
T ss_pred CCCeEEecCCcC----------------CCc-cEEEEeec--hhh---hhHHHHHHHHHHhhc-CeEEEechhhcccC-C
Confidence 467778888765 578 99999999 433 234589999999987 9999999854 333 2
Q ss_pred CCCchhhHHHHHHHHHHhccc--cc---CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCC
Q 019193 154 RYPCAYDDGWTVLKWAKSRSW--LQ---SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 222 (344)
Q Consensus 154 ~~~~~~~D~~~a~~~l~~~~~--~~---~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~ 222 (344)
.-.+.+++..++++|+.+.-. +. ..+.+ +++++|||.||..|.++|+... ...++.++|.+.|+-..
T Consensus 88 ~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~-klal~GHSrGGktAFAlALg~a-~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 88 DGQDEIKSAASVINWLPEGLQHVLPENVEANLS-KLALSGHSRGGKTAFALALGYA-TSLKFSALIGIDPVAGT 159 (307)
T ss_pred CchHHHHHHHHHHHHHHhhhhhhCCCCcccccc-eEEEeecCCccHHHHHHHhccc-ccCchhheecccccCCC
Confidence 335667889999999997521 11 16667 9999999999999999999765 45689999999998653
No 77
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.36 E-value=2.3e-10 Score=100.39 Aligned_cols=95 Identities=21% Similarity=0.237 Sum_probs=70.8
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCc---------hhhHHHHHHHHHHhccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC---------AYDDGWTVLKWAKSRSW 174 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~---------~~~D~~~a~~~l~~~~~ 174 (344)
.. |+|+++|| | ...+..++.....|+.+ |+.|+++|.|......-|. ...|+.+.++.+-
T Consensus 43 ~g-P~illlHG--f---Pe~wyswr~q~~~la~~-~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg---- 111 (322)
T KOG4178|consen 43 DG-PIVLLLHG--F---PESWYSWRHQIPGLASR-GYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG---- 111 (322)
T ss_pred CC-CEEEEEcc--C---Cccchhhhhhhhhhhhc-ceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----
Confidence 44 99999999 3 23344467788899988 8999999999654333332 2355555555442
Q ss_pred ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 175 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 175 ~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
-+ ++++.||++|+.+|..+|...++ ++.|+++++-
T Consensus 112 -----~~-k~~lvgHDwGaivaw~la~~~Pe---rv~~lv~~nv 146 (322)
T KOG4178|consen 112 -----LK-KAFLVGHDWGAIVAWRLALFYPE---RVDGLVTLNV 146 (322)
T ss_pred -----cc-eeEEEeccchhHHHHHHHHhChh---hcceEEEecC
Confidence 24 99999999999999999999887 6888887763
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.36 E-value=3.7e-11 Score=105.26 Aligned_cols=125 Identities=21% Similarity=0.292 Sum_probs=81.0
Q ss_pred EEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeec
Q 019193 67 DVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 67 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d 146 (344)
.+.+++++-+.+++..+... ... |.||.+|| .-|+..+..-+.+.+.+.++ |+.||.++
T Consensus 53 ~v~~pdg~~~~ldw~~~p~~----------------~~~-P~vVl~HG---L~G~s~s~y~r~L~~~~~~r-g~~~Vv~~ 111 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPRA----------------AKK-PLVVLFHG---LEGSSNSPYARGLMRALSRR-GWLVVVFH 111 (345)
T ss_pred EEEcCCCCEEEEeeccCccc----------------cCC-ceEEEEec---cCCCCcCHHHHHHHHHHHhc-CCeEEEEe
Confidence 34445555566666664222 356 99999999 33444444346667777777 99999999
Q ss_pred cCCCCCCC-------CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEE-Eecc
Q 019193 147 YRRAPENR-------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNI-LLNP 218 (344)
Q Consensus 147 yr~~p~~~-------~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~i-l~~p 218 (344)
+|.+.... -....+|+...++|++.. ..+. ++..+|.|.||++-+.+.....+. .++.+.+ ...|
T Consensus 112 ~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~-----~~~r-~~~avG~SLGgnmLa~ylgeeg~d-~~~~aa~~vs~P 184 (345)
T COG0429 112 FRGCSGEANTSPRLYHSGETEDIRFFLDWLKAR-----FPPR-PLYAVGFSLGGNMLANYLGEEGDD-LPLDAAVAVSAP 184 (345)
T ss_pred cccccCCcccCcceecccchhHHHHHHHHHHHh-----CCCC-ceEEEEecccHHHHHHHHHhhccC-cccceeeeeeCH
Confidence 99753322 123459999999999886 3455 999999999996655544443332 2344444 4445
Q ss_pred c
Q 019193 219 M 219 (344)
Q Consensus 219 ~ 219 (344)
+
T Consensus 185 ~ 185 (345)
T COG0429 185 F 185 (345)
T ss_pred H
Confidence 4
No 79
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.35 E-value=2.3e-11 Score=99.77 Aligned_cols=177 Identities=17% Similarity=0.153 Sum_probs=120.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC--------------------CC-CCchhhHHHHH
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE--------------------NR-YPCAYDDGWTV 165 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~--------------------~~-~~~~~~D~~~a 165 (344)
.+|||+||-| ..... +..+...+..+ ++.-++|.-+.-|- .+ -...+..+.+.
T Consensus 4 atIi~LHglG----Dsg~~-~~~~~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~ 77 (206)
T KOG2112|consen 4 ATIIFLHGLG----DSGSG-WAQFLKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN 77 (206)
T ss_pred EEEEEEecCC----CCCcc-HHHHHHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHH
Confidence 6899999954 33332 34455554444 66666653221110 00 01223455666
Q ss_pred HHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHH
Q 019193 166 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDW 245 (344)
Q Consensus 166 ~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (344)
+.++.++....+++++ ||++.|.|+||.+|+..+..++. .+.|.+..+++...... .+
T Consensus 78 i~~Li~~e~~~Gi~~~-rI~igGfs~G~a~aL~~~~~~~~---~l~G~~~~s~~~p~~~~-----~~------------- 135 (206)
T KOG2112|consen 78 IANLIDNEPANGIPSN-RIGIGGFSQGGALALYSALTYPK---ALGGIFALSGFLPRASI-----GL------------- 135 (206)
T ss_pred HHHHHHHHHHcCCCcc-ceeEcccCchHHHHHHHHhcccc---ccceeeccccccccchh-----hc-------------
Confidence 7777777777789999 99999999999999999998743 57888888877531110 00
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEEEeCCCceEEEEC
Q 019193 246 YWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGFYFL 323 (344)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~ 323 (344)
+.. ....+.+|.+..||+.|++++ .+....+.|+..++.++++.|+|..|..
T Consensus 136 --------------~~~---------~~~~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~--- 189 (206)
T KOG2112|consen 136 --------------PGW---------LPGVNYTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST--- 189 (206)
T ss_pred --------------cCC---------ccccCcchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc---
Confidence 000 000014589999999999986 4688889999999999999999999954
Q ss_pred CCchHHHHHHHHHHHHHhc
Q 019193 324 PNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~fl~~ 342 (344)
..+.++++..|+.+
T Consensus 190 -----~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 190 -----SPQELDDLKSWIKT 203 (206)
T ss_pred -----cHHHHHHHHHHHHH
Confidence 45578899999875
No 80
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.34 E-value=7.7e-11 Score=109.18 Aligned_cols=101 Identities=19% Similarity=0.128 Sum_probs=70.1
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC-------chhhHHHHHHHHHHhccccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-------CAYDDGWTVLKWAKSRSWLQ 176 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~-------~~~~D~~~a~~~l~~~~~~~ 176 (344)
.. |.||++||.+. +. ..|..++..|++ ++.|+++|++......-+ ..+++..+.+..+.+.
T Consensus 126 ~~-~~ivllHG~~~---~~--~~w~~~~~~L~~--~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~---- 193 (383)
T PLN03084 126 NN-PPVLLIHGFPS---QA--YSYRKVLPVLSK--NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE---- 193 (383)
T ss_pred CC-CeEEEECCCCC---CH--HHHHHHHHHHhc--CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH----
Confidence 35 88999999552 22 236777877764 799999999965432222 1334443333333333
Q ss_pred CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 177 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 177 ~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
+..+ ++.|+|+|+||.+|+.++.+.++ +++++|+++|...
T Consensus 194 -l~~~-~~~LvG~s~GG~ia~~~a~~~P~---~v~~lILi~~~~~ 233 (383)
T PLN03084 194 -LKSD-KVSLVVQGYFSPPVVKYASAHPD---KIKKLILLNPPLT 233 (383)
T ss_pred -hCCC-CceEEEECHHHHHHHHHHHhChH---hhcEEEEECCCCc
Confidence 2335 89999999999999999988766 6999999998653
No 81
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.34 E-value=6.9e-11 Score=106.96 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=66.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC-----chhhHHHHHHHHHHhcccccCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-----CAYDDGWTVLKWAKSRSWLQSKDSK 181 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~-----~~~~D~~~a~~~l~~~~~~~~~d~~ 181 (344)
+.||++||++. +... ......+..+ ++.|+++|+|.......+ ...+|..+.+..+.+. ++.+
T Consensus 28 ~~lvllHG~~~---~~~~---~~~~~~~~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~-----l~~~ 95 (306)
T TIGR01249 28 KPVVFLHGGPG---SGTD---PGCRRFFDPE-TYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREK-----LGIK 95 (306)
T ss_pred CEEEEECCCCC---CCCC---HHHHhccCcc-CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-----cCCC
Confidence 66899999642 2211 2233334334 899999999975443322 2345555555555554 3345
Q ss_pred CeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 182 AHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 182 ~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
+++++|+|+||.+++.++.+.++ +++++|++.++.
T Consensus 96 -~~~lvG~S~GG~ia~~~a~~~p~---~v~~lvl~~~~~ 130 (306)
T TIGR01249 96 -NWLVFGGSWGSTLALAYAQTHPE---VVTGLVLRGIFL 130 (306)
T ss_pred -CEEEEEECHHHHHHHHHHHHChH---hhhhheeecccc
Confidence 89999999999999999988766 588888887654
No 82
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.33 E-value=3.2e-10 Score=102.93 Aligned_cols=134 Identities=17% Similarity=0.113 Sum_probs=93.8
Q ss_pred EEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEee
Q 019193 66 FDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSV 145 (344)
Q Consensus 66 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~ 145 (344)
+-+.++++..+.++|+.+..... ..+.... |+||++||= ..||.+. |.......|++.|+.||.+
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~----------~~~~~~~-P~vvilpGl--tg~S~~~--YVr~lv~~a~~~G~r~VVf 160 (409)
T KOG1838|consen 96 EIIKTSDGGTVTLDWVENPDSRC----------RTDDGTD-PIVVILPGL--TGGSHES--YVRHLVHEAQRKGYRVVVF 160 (409)
T ss_pred EEEEeCCCCEEEEeeccCccccc----------CCCCCCC-cEEEEecCC--CCCChhH--HHHHHHHHHHhCCcEEEEE
Confidence 34555666669999997765410 0123456 999999992 2223332 4443444455559999999
Q ss_pred ccCCCCCCCCC-------chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 146 NYRRAPENRYP-------CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 146 dyr~~p~~~~~-------~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
|-|.....+.. ...+|+.++++++++. .... +++.+|.|+||++...+..+..++..-++|+.+.+|
T Consensus 161 N~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~-----~P~a-~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P 234 (409)
T KOG1838|consen 161 NHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKR-----YPQA-PLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNP 234 (409)
T ss_pred CCCCCCCCccCCCceeecCCHHHHHHHHHHHHHh-----CCCC-ceEEEEecchHHHHHHHhhhccCCCCceeEEEEecc
Confidence 99976544332 3459999999999988 3344 899999999999999888777665556777778888
Q ss_pred cc
Q 019193 219 MF 220 (344)
Q Consensus 219 ~~ 220 (344)
|-
T Consensus 235 wd 236 (409)
T KOG1838|consen 235 WD 236 (409)
T ss_pred ch
Confidence 84
No 83
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.32 E-value=1.3e-11 Score=105.61 Aligned_cols=197 Identities=15% Similarity=0.054 Sum_probs=116.9
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEE-eeccC---C
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVV-SVNYR---R 149 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv-~~dyr---~ 149 (344)
..+.+|+|.|++.. +..+-+ |.+||+||+|-.. + +. + ..++...|.++. .+.|. +
T Consensus 172 neLkYrly~Pkdy~------------pdkky~-PLvlfLHgagq~g-~-dn--~----~~l~sg~gaiawa~pedqcfVl 230 (387)
T COG4099 172 NELKYRLYTPKDYA------------PDKKYY-PLVLFLHGAGQGG-S-DN--D----KVLSSGIGAIAWAGPEDQCFVL 230 (387)
T ss_pred ceeeEEEecccccC------------CCCccc-cEEEEEecCCCCC-c-hh--h----hhhhcCccceeeecccCceEEE
Confidence 34999999998763 223457 9999999988532 2 11 1 233332232222 22222 3
Q ss_pred CCCC-C----CCch-hhHHHHHHHHHH-hcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCC
Q 019193 150 APEN-R----YPCA-YDDGWTVLKWAK-SRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 222 (344)
Q Consensus 150 ~p~~-~----~~~~-~~D~~~a~~~l~-~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~ 222 (344)
+|++ + .... ..-....++-+. ..++.++||.+ ||++.|.|+||..+..++.+.++ .+++.+++++--+.
T Consensus 231 APQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID~s-RIYviGlSrG~~gt~al~~kfPd---fFAaa~~iaG~~d~ 306 (387)
T COG4099 231 APQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRS-RIYVIGLSRGGFGTWALAEKFPD---FFAAAVPIAGGGDR 306 (387)
T ss_pred cccccccccccccccchhHHHHHHHHHHHHhhccCcccc-eEEEEeecCcchhhHHHHHhCch---hhheeeeecCCCch
Confidence 4442 1 0111 111122333333 23346679999 99999999999999999998877 68888888863210
Q ss_pred CCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHH
Q 019193 223 QERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEG 300 (344)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~ 300 (344)
.... +.++..|.+++|+++|.++| .++-..++
T Consensus 307 ------------------------------------v~lv----------~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~ 340 (387)
T COG4099 307 ------------------------------------VYLV----------RTLKKAPIWVFHSSDDKVIPVSNSRVLYER 340 (387)
T ss_pred ------------------------------------hhhh----------hhhccCceEEEEecCCCccccCcceeehHH
Confidence 0001 11113489999999998865 46778899
Q ss_pred HHHCCCCEEEEEeC---CCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 301 LKKAGQDVKLLYLE---QATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 301 L~~~g~~~~~~~~~---g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
|++.+.++.+..|. -..|++..... ....--..++.+||-+
T Consensus 341 lk~~~~kv~Ytaf~~g~~~~eG~d~~g~-w~atyn~~eaieWLl~ 384 (387)
T COG4099 341 LKALDRKVNYTAFLEGTTVLEGVDHSGV-WWATYNDAEAIEWLLK 384 (387)
T ss_pred HHhhccccchhhhhhccccccccCCCCc-ceeecCCHHHHHHHHh
Confidence 99988888888877 33444432210 1111123356677754
No 84
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.31 E-value=1.1e-10 Score=113.93 Aligned_cols=124 Identities=19% Similarity=0.183 Sum_probs=90.0
Q ss_pred CCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC
Q 019193 73 GTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE 152 (344)
Q Consensus 73 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~ 152 (344)
+..+.+++|+|++. ++. |+||++||.|...+... .........++++ ||.|+.+|+|....
T Consensus 6 G~~L~~~~~~P~~~----------------~~~-P~Il~~~gyg~~~~~~~-~~~~~~~~~l~~~-Gy~vv~~D~RG~g~ 66 (550)
T TIGR00976 6 GTRLAIDVYRPAGG----------------GPV-PVILSRTPYGKDAGLRW-GLDKTEPAWFVAQ-GYAVVIQDTRGRGA 66 (550)
T ss_pred CCEEEEEEEecCCC----------------CCC-CEEEEecCCCCchhhcc-ccccccHHHHHhC-CcEEEEEecccccc
Confidence 34577889999754 367 99999999653221000 0112345677777 99999999996533
Q ss_pred C-----CC-CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCC
Q 019193 153 N-----RY-PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 223 (344)
Q Consensus 153 ~-----~~-~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~ 223 (344)
. .+ ....+|+.++++|+.++.. .+ . +|+++|+|+||.+++.++...++ .+++++..+++.+..
T Consensus 67 S~g~~~~~~~~~~~D~~~~i~~l~~q~~---~~-~-~v~~~G~S~GG~~a~~~a~~~~~---~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 67 SEGEFDLLGSDEAADGYDLVDWIAKQPW---CD-G-NVGMLGVSYLAVTQLLAAVLQPP---ALRAIAPQEGVWDLY 135 (550)
T ss_pred CCCceEecCcccchHHHHHHHHHHhCCC---CC-C-cEEEEEeChHHHHHHHHhccCCC---ceeEEeecCcccchh
Confidence 2 12 5678999999999988753 33 6 99999999999999998877543 699999988876643
No 85
>PLN02578 hydrolase
Probab=99.31 E-value=2.4e-10 Score=105.61 Aligned_cols=96 Identities=22% Similarity=0.113 Sum_probs=64.5
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCc---hhhH-HHHHHHHHHhcccccCCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC---AYDD-GWTVLKWAKSRSWLQSKDSKA 182 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~---~~~D-~~~a~~~l~~~~~~~~~d~~~ 182 (344)
|.||++||.|- +. ..|......|++ ++.|+++|++.......+. ..++ ...+.+++.+. ..+
T Consensus 87 ~~vvliHG~~~---~~--~~w~~~~~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~------~~~- 152 (354)
T PLN02578 87 LPIVLIHGFGA---SA--FHWRYNIPELAK--KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV------VKE- 152 (354)
T ss_pred CeEEEECCCCC---CH--HHHHHHHHHHhc--CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh------ccC-
Confidence 55899999442 22 225666777764 6999999999765433221 1121 22233333332 225
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
+++++|||+||.+|+.++.+.++ ++++++++++.
T Consensus 153 ~~~lvG~S~Gg~ia~~~A~~~p~---~v~~lvLv~~~ 186 (354)
T PLN02578 153 PAVLVGNSLGGFTALSTAVGYPE---LVAGVALLNSA 186 (354)
T ss_pred CeEEEEECHHHHHHHHHHHhChH---hcceEEEECCC
Confidence 89999999999999999998876 69999988764
No 86
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.30 E-value=6.6e-12 Score=122.67 Aligned_cols=114 Identities=28% Similarity=0.392 Sum_probs=87.4
Q ss_pred CCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCC
Q 019193 72 RGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP 151 (344)
Q Consensus 72 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p 151 (344)
+.+++.+.+|.|.... ..+ . ||+||||||||..|+........ ...++...+++||.++|||.+
T Consensus 93 sEDCLylNV~tp~~~~-------------~~~-~-pV~V~iHGG~~~~gs~~~~~~~~-~~~~~~~~~VVvVt~~YRLG~ 156 (545)
T KOG1516|consen 93 SEDCLYLNVYTPQGCS-------------ESK-L-PVMVYIHGGGFQFGSASSFEIIS-PAYVLLLKDVVVVTINYRLGP 156 (545)
T ss_pred cCCCceEEEeccCCCc-------------cCC-C-CEEEEEeCCceeeccccchhhcC-chhccccCCEEEEEeccccee
Confidence 3577999999998762 112 7 99999999999988854321112 223333448999999999752
Q ss_pred ---------CCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHH
Q 019193 152 ---------ENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 152 ---------~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~ 202 (344)
..+--..+.|...|++|++++...+|.||+ +|.|+|||+||..+..+...
T Consensus 157 lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~-~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 157 LGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPK-NVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred ceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCC-eEEEEeechhHHHHHHHhcC
Confidence 123345678999999999999999999999 99999999999999877654
No 87
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.30 E-value=2.7e-10 Score=106.43 Aligned_cols=206 Identities=15% Similarity=0.035 Sum_probs=124.8
Q ss_pred CeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhC---CcEEEeeccCC--
Q 019193 75 NLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTC---KAVVVSVNYRR-- 149 (344)
Q Consensus 75 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~---g~~vv~~dyr~-- 149 (344)
...+.+|.|.+.. .++. |+|+++||+.|..... .......+.++- .+++|.+|...
T Consensus 193 ~r~v~VY~P~~y~--------------~~~~-PvlyllDG~~w~~~~~----~~~~ld~li~~g~i~P~ivV~id~~~~~ 253 (411)
T PRK10439 193 SRRVWIYTTGDAA--------------PEER-PLAILLDGQFWAESMP----VWPALDSLTHRGQLPPAVYLLIDAIDTT 253 (411)
T ss_pred ceEEEEEECCCCC--------------CCCC-CEEEEEECHHhhhcCC----HHHHHHHHHHcCCCCceEEEEECCCCcc
Confidence 4788899997651 3477 9999999988853211 233444555541 25577777521
Q ss_pred --CCCCCCCc-hhhHH-HHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCC
Q 019193 150 --APENRYPC-AYDDG-WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQER 225 (344)
Q Consensus 150 --~p~~~~~~-~~~D~-~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~ 225 (344)
.-+.+... ..+.+ .+.+-|+.++.. ...|++ +.+|+|.|+||..|+.++.+.++ .+.+++.+||.+.....
T Consensus 254 ~R~~el~~~~~f~~~l~~eLlP~I~~~y~-~~~d~~-~~~IaG~S~GGl~AL~~al~~Pd---~Fg~v~s~Sgs~ww~~~ 328 (411)
T PRK10439 254 HRSQELPCNADFWLAVQQELLPQVRAIAP-FSDDAD-RTVVAGQSFGGLAALYAGLHWPE---RFGCVLSQSGSFWWPHR 328 (411)
T ss_pred cccccCCchHHHHHHHHHHHHHHHHHhCC-CCCCcc-ceEEEEEChHHHHHHHHHHhCcc---cccEEEEeccceecCCc
Confidence 11111111 11222 233445544321 225778 99999999999999999999887 68999999997642211
Q ss_pred ChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCC-cChHHHHHHHHHHHHC
Q 019193 226 TESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLD-LIQDWQLAYMEGLKKA 304 (344)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D-~l~~~~~~~~~~L~~~ 304 (344)
.. . . ..++.+.+.. . .. ... -..++|.+|+.| .+.+..+++.+.|+++
T Consensus 329 ~~------~----~---~~~l~~~l~~-~------~~--------~~~---~lr~~i~~G~~E~~~~~~~~~l~~~L~~~ 377 (411)
T PRK10439 329 GG------Q----Q---EGVLLEQLKA-G------EV--------SAR---GLRIVLEAGRREPMIMRANQALYAQLHPA 377 (411)
T ss_pred cC------C----c---hhHHHHHHHh-c------cc--------CCC---CceEEEeCCCCCchHHHHHHHHHHHHHHC
Confidence 00 0 0 0011111100 0 00 000 125999999988 5567789999999999
Q ss_pred CCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 305 GQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 305 g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
|.++++.+++| +|.+.. -+..+.+-++||-.
T Consensus 378 G~~~~~~~~~G-GHd~~~------Wr~~L~~~L~~l~~ 408 (411)
T PRK10439 378 GHSVFWRQVDG-GHDALC------WRGGLIQGLIDLWQ 408 (411)
T ss_pred CCcEEEEECCC-CcCHHH------HHHHHHHHHHHHhc
Confidence 99999999998 697642 23355555566543
No 88
>PRK07581 hypothetical protein; Validated
Probab=99.30 E-value=4.6e-11 Score=109.74 Aligned_cols=99 Identities=16% Similarity=0.085 Sum_probs=64.4
Q ss_pred cEEEEEcCCcccccCCCchhhHHHH---HHHHhhCCcEEEeeccCCCCCCCCCc---------------hhhHHHHHHHH
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILC---RRLVGTCKAVVVSVNYRRAPENRYPC---------------AYDDGWTVLKW 168 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~---~~la~~~g~~vv~~dyr~~p~~~~~~---------------~~~D~~~a~~~ 168 (344)
|+||++||+++. ... +.... ..|..+ ++.|+++|+|.......+. ..+|+.+....
T Consensus 42 ~~vll~~~~~~~---~~~--~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (339)
T PRK07581 42 NAILYPTWYSGT---HQD--NEWLIGPGRALDPE-KYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRL 115 (339)
T ss_pred CEEEEeCCCCCC---ccc--chhhccCCCccCcC-ceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHH
Confidence 777777776642 211 22111 245444 8999999999754433221 13555554444
Q ss_pred HHhcccccCCCCCCe-EEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 169 AKSRSWLQSKDSKAH-IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 169 l~~~~~~~~~d~~~~-i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
+.+. ...+ + +.|+|+|+||.+|+.+|.+.++ +++++|++++..
T Consensus 116 l~~~-----lgi~-~~~~lvG~S~GG~va~~~a~~~P~---~V~~Lvli~~~~ 159 (339)
T PRK07581 116 LTEK-----FGIE-RLALVVGWSMGAQQTYHWAVRYPD---MVERAAPIAGTA 159 (339)
T ss_pred HHHH-----hCCC-ceEEEEEeCHHHHHHHHHHHHCHH---HHhhheeeecCC
Confidence 5543 2334 7 4799999999999999999887 689999887543
No 89
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.29 E-value=9.8e-12 Score=106.09 Aligned_cols=175 Identities=17% Similarity=0.097 Sum_probs=91.5
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhh-CCCCc
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRL-DGKYF 237 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~-~~~~~ 237 (344)
++=...|++|++++.. ++++ +|.|+|.|.||-+|+.+|.+.+ .|+++|.++|..-........... ...+.
T Consensus 3 LEyfe~Ai~~L~~~p~---v~~~-~Igi~G~SkGaelALllAs~~~----~i~avVa~~ps~~~~~~~~~~~~~~~~lp~ 74 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPE---VDPD-KIGIIGISKGAELALLLASRFP----QISAVVAISPSSVVFQGIGFYRDSSKPLPY 74 (213)
T ss_dssp CHHHHHHHHHHHCSTT---B--S-SEEEEEETHHHHHHHHHHHHSS----SEEEEEEES--SB--SSEEEETTE--EE--
T ss_pred hHHHHHHHHHHHhCCC---CCCC-CEEEEEECHHHHHHHHHHhcCC----CccEEEEeCCceeEecchhcccCCCccCCc
Confidence 4556789999999977 8888 9999999999999999999976 499999999853221110000000 00001
Q ss_pred cCHHhHHHHHHHhCCCCCCC----CCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHH---HHHHHHHHHHCCCC--E
Q 019193 238 VTVQDRDWYWRAYLPEGANR----DHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW---QLAYMEGLKKAGQD--V 308 (344)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~---~~~~~~~L~~~g~~--~ 308 (344)
+........+ ..+..... ............-.++.. -.|+|+++|++|.+.|- ++.+.++|+++|.+ +
T Consensus 75 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i-~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~ 151 (213)
T PF08840_consen 75 LPFDISKFSW--NEPGLLRSRYAFELADDKAVEEARIPVEKI-KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNV 151 (213)
T ss_dssp --B-GGG-EE---TTS-EE-TT-B--TTTGGGCCCB--GGG---SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----
T ss_pred CCcChhhcee--cCCcceehhhhhhcccccccccccccHHHc-CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcc
Confidence 1100000000 00000000 000000000000011111 33899999999988763 46667889988754 8
Q ss_pred EEEEeCCCceEEEE--CCC----------------------chHHHHHHHHHHHHHhccC
Q 019193 309 KLLYLEQATIGFYF--LPN----------------------NGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 309 ~~~~~~g~~H~f~~--~~~----------------------~~~~~~~~~~~~~fl~~~l 344 (344)
++..|++++|.+.. .|. .....+.++++++||++||
T Consensus 152 ~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 152 EHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred eEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998752 111 1135789999999999986
No 90
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.26 E-value=2.5e-10 Score=123.22 Aligned_cols=99 Identities=18% Similarity=0.211 Sum_probs=69.2
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC-----------chhhHHHHHHHHHHhc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-----------CAYDDGWTVLKWAKSR 172 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~-----------~~~~D~~~a~~~l~~~ 172 (344)
.. |.||++||.|. +.. .|..+...|+. ++.|+.+|+|.......+ ..+++..+.+.-+.++
T Consensus 1370 ~~-~~vVllHG~~~---s~~--~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~ 1441 (1655)
T PLN02980 1370 EG-SVVLFLHGFLG---TGE--DWIPIMKAISG--SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH 1441 (1655)
T ss_pred CC-CeEEEECCCCC---CHH--HHHHHHHHHhC--CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH
Confidence 45 88999999552 332 26777777764 699999999975443221 1234444444333333
Q ss_pred ccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 173 SWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 173 ~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
++.+ ++.|+|||+||.+|+.++.+.++ ++++++++++.
T Consensus 1442 -----l~~~-~v~LvGhSmGG~iAl~~A~~~P~---~V~~lVlis~~ 1479 (1655)
T PLN02980 1442 -----ITPG-KVTLVGYSMGARIALYMALRFSD---KIEGAVIISGS 1479 (1655)
T ss_pred -----hCCC-CEEEEEECHHHHHHHHHHHhChH---hhCEEEEECCC
Confidence 3346 89999999999999999988776 68999988864
No 91
>PLN02872 triacylglycerol lipase
Probab=99.25 E-value=1.7e-10 Score=107.22 Aligned_cols=108 Identities=17% Similarity=0.071 Sum_probs=69.3
Q ss_pred CcccEEEEEcCCcccccCCC-chhhHHHHHHHHhhCCcEEEeeccCCCCCC----------------CCCch-hhHHHHH
Q 019193 104 VVVPVIIFFHGGSFAHSSAN-SAIYDILCRRLVGTCKAVVVSVNYRRAPEN----------------RYPCA-YDDGWTV 165 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~-~~~~~~~~~~la~~~g~~vv~~dyr~~p~~----------------~~~~~-~~D~~~a 165 (344)
+. |+|+++||.+.....-. ......++..|+++ ||.|+.+|.|..... .+... ..|+.++
T Consensus 73 ~~-~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~-GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~ 150 (395)
T PLN02872 73 RG-PPVLLQHGLFMAGDAWFLNSPEQSLGFILADH-GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEM 150 (395)
T ss_pred CC-CeEEEeCcccccccceeecCcccchHHHHHhC-CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHH
Confidence 45 88999999642211100 00013456678877 999999999964210 11122 3799999
Q ss_pred HHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 166 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 166 ~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
++++.+. ..+ ++.++|||+||.+++.++ ..++...+++.+++++|...
T Consensus 151 id~i~~~------~~~-~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 151 IHYVYSI------TNS-KIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred HHHHHhc------cCC-ceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 9999764 235 899999999999998544 33332235667777777643
No 92
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.23 E-value=2.3e-10 Score=105.27 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=54.4
Q ss_pred hHHHHH---HHHhhCCcEEEeeccCCCCCCC-CCchhhHHHHHHHHHHhcccccCCCCCCe-EEEeeCCchHHHHHHHHH
Q 019193 127 YDILCR---RLVGTCKAVVVSVNYRRAPENR-YPCAYDDGWTVLKWAKSRSWLQSKDSKAH-IYLAGDSSGGNIVHHVAL 201 (344)
Q Consensus 127 ~~~~~~---~la~~~g~~vv~~dyr~~p~~~-~~~~~~D~~~a~~~l~~~~~~~~~d~~~~-i~l~G~SaGG~lA~~~a~ 201 (344)
|..+.. .|..+ +|.|+++|+|...+.. .+..++|..+.+..+.+. ++.+ + ++|+|+|+||.+|+.++.
T Consensus 85 w~~~v~~~~~L~~~-~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~-----l~l~-~~~~lvG~SmGG~vA~~~A~ 157 (343)
T PRK08775 85 WEGLVGSGRALDPA-RFRLLAFDFIGADGSLDVPIDTADQADAIALLLDA-----LGIA-RLHAFVGYSYGALVGLQFAS 157 (343)
T ss_pred chhccCCCCccCcc-ccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHH-----cCCC-cceEEEEECHHHHHHHHHHH
Confidence 444443 34334 7999999999653221 111233333333333333 2223 4 579999999999999999
Q ss_pred HhcccCCeeeEEEEeccccC
Q 019193 202 RAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 202 ~~~~~~~~i~~~il~~p~~~ 221 (344)
+.++ +++++|++++...
T Consensus 158 ~~P~---~V~~LvLi~s~~~ 174 (343)
T PRK08775 158 RHPA---RVRTLVVVSGAHR 174 (343)
T ss_pred HChH---hhheEEEECcccc
Confidence 9877 6999999987643
No 93
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.23 E-value=3.5e-09 Score=82.86 Aligned_cols=180 Identities=15% Similarity=0.202 Sum_probs=110.3
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC---CCC---C--CCchhhHHH-HHHHHHHhcccccC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA---PEN---R--YPCAYDDGW-TVLKWAKSRSWLQS 177 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~---p~~---~--~~~~~~D~~-~a~~~l~~~~~~~~ 177 (344)
-+||+-||-|- +.++......|..|+.+ |+.|+.+++... ++. | -...+++++ .++.-+.+.
T Consensus 15 ~tilLaHGAGa---smdSt~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~----- 85 (213)
T COG3571 15 VTILLAHGAGA---SMDSTSMTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG----- 85 (213)
T ss_pred EEEEEecCCCC---CCCCHHHHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc-----
Confidence 68899999663 45555567889999998 999999987521 111 1 112344443 333334333
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEe-ccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCC
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL-NPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGAN 256 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.+.. ++++.|+||||-.|.+++..... .|.+++++ ||+.-.-. .
T Consensus 86 l~~g-pLi~GGkSmGGR~aSmvade~~A---~i~~L~clgYPfhppGK-------------------------------P 130 (213)
T COG3571 86 LAEG-PLIIGGKSMGGRVASMVADELQA---PIDGLVCLGYPFHPPGK-------------------------------P 130 (213)
T ss_pred ccCC-ceeeccccccchHHHHHHHhhcC---CcceEEEecCccCCCCC-------------------------------c
Confidence 4556 89999999999999999887644 48888764 46532111 0
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEEC---CC---chHHH
Q 019193 257 RDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFL---PN---NGHFY 330 (344)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~---~~---~~~~~ 330 (344)
+.. +...+..++ .|++|++|+.|.+-...+ . +--....+.+++.++++.|..-.. .. ...-+
T Consensus 131 -e~~-------Rt~HL~gl~-tPtli~qGtrD~fGtr~~-V--a~y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~ 198 (213)
T COG3571 131 -EQL-------RTEHLTGLK-TPTLITQGTRDEFGTRDE-V--AGYALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLK 198 (213)
T ss_pred -ccc-------hhhhccCCC-CCeEEeecccccccCHHH-H--HhhhcCCceEEEEeccCccccccccccccccHHHHHH
Confidence 000 112222222 279999999999843211 1 112344578999999999975321 11 12344
Q ss_pred HHHHHHHHHHhc
Q 019193 331 TVMDEISNFVSC 342 (344)
Q Consensus 331 ~~~~~~~~fl~~ 342 (344)
...+.+..|+++
T Consensus 199 ~~A~~va~~~~~ 210 (213)
T COG3571 199 TLAEQVAGWARR 210 (213)
T ss_pred HHHHHHHHHHhh
Confidence 556677777654
No 94
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.22 E-value=5.6e-10 Score=92.63 Aligned_cols=183 Identities=16% Similarity=0.173 Sum_probs=96.9
Q ss_pred EEEEcCCcccccCCCchhhHHHHHHHHhhCC--cEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEE
Q 019193 109 IIFFHGGSFAHSSANSAIYDILCRRLVGTCK--AVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 186 (344)
Q Consensus 109 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g--~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l 186 (344)
|+|+|| |.. +..+.....+.+.+++. + +.+..++++. ..+++.+.+.-+.+. ..++ .++|
T Consensus 2 ilYlHG--F~S-sp~S~Ka~~l~~~~~~~-~~~~~~~~p~l~~--------~p~~a~~~l~~~i~~-----~~~~-~~~l 63 (187)
T PF05728_consen 2 ILYLHG--FNS-SPQSFKAQALKQYFAEH-GPDIQYPCPDLPP--------FPEEAIAQLEQLIEE-----LKPE-NVVL 63 (187)
T ss_pred eEEecC--CCC-CCCCHHHHHHHHHHHHh-CCCceEECCCCCc--------CHHHHHHHHHHHHHh-----CCCC-CeEE
Confidence 799999 433 44443344445555554 4 4455554432 233444444444444 3445 7999
Q ss_pred eeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCC
Q 019193 187 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFG 266 (344)
Q Consensus 187 ~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (344)
+|.|+||..|..++.+.. +++ |++.|.+...............+.... ....+......+.
T Consensus 64 iGSSlGG~~A~~La~~~~-----~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e-------------~~~~~~~~~~~l~ 124 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG-----LPA-VLINPAVRPYELLQDYIGEQTNPYTGE-------------SYELTEEHIEELK 124 (187)
T ss_pred EEEChHHHHHHHHHHHhC-----CCE-EEEcCCCCHHHHHHHhhCccccCCCCc-------------cceechHhhhhcc
Confidence 999999999999998863 333 888998764332111000000000000 0000000000000
Q ss_pred CCCCCcCCCCCC-cEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 267 PKGIDLVGVKFP-KSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 267 ~~~~~~~~~~~p-P~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
. -.......| ++++++++.|.++|..+++ .+.+ .+...+.+|.+|.|.. ..+.+..+.+|+.
T Consensus 125 ~--l~~~~~~~~~~~lvll~~~DEvLd~~~a~-~~~~----~~~~~i~~ggdH~f~~------f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 125 A--LEVPYPTNPERYLVLLQTGDEVLDYREAV-AKYR----GCAQIIEEGGDHSFQD------FEEYLPQIIAFLQ 187 (187)
T ss_pred e--EeccccCCCccEEEEEecCCcccCHHHHH-HHhc----CceEEEEeCCCCCCcc------HHHHHHHHHHhhC
Confidence 0 000001122 8999999999999874432 2222 2344567888999853 5567788888863
No 95
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.21 E-value=2.6e-10 Score=105.25 Aligned_cols=102 Identities=18% Similarity=0.156 Sum_probs=66.4
Q ss_pred cEEEEEcCCcccccCCCc---------hhhHHHH---HHHHhhCCcEEEeeccCC--C----CCC------C----C-Cc
Q 019193 107 PVIIFFHGGSFAHSSANS---------AIYDILC---RRLVGTCKAVVVSVNYRR--A----PEN------R----Y-PC 157 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~---------~~~~~~~---~~la~~~g~~vv~~dyr~--~----p~~------~----~-~~ 157 (344)
|.||++||-+. +... .+|..+. +.+..+ +|.|+++|+|. . |.. + + +.
T Consensus 32 ~~vll~Hg~~~---~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~ 107 (351)
T TIGR01392 32 NAVLVCHALTG---DAHVAGYHDDGDPGWWDDLIGPGRAIDTD-RYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLI 107 (351)
T ss_pred CEEEEcCCcCc---chhhcccCCCCCCCchhhccCCCCCcCCC-ceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Confidence 88999999432 2211 1233332 244445 89999999997 1 210 0 1 12
Q ss_pred hhhHHHHHHHHHHhcccccCCCCCCe-EEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 158 AYDDGWTVLKWAKSRSWLQSKDSKAH-IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 158 ~~~D~~~a~~~l~~~~~~~~~d~~~~-i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
.++|..+.+..+.+. +..+ + ++|+|||+||.+|+.++.+.++ +++++|++++...
T Consensus 108 ~~~~~~~~~~~~~~~-----l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 163 (351)
T TIGR01392 108 TIRDDVKAQKLLLDH-----LGIE-QIAAVVGGSMGGMQALEWAIDYPE---RVRAIVVLATSAR 163 (351)
T ss_pred cHHHHHHHHHHHHHH-----cCCC-CceEEEEECHHHHHHHHHHHHChH---hhheEEEEccCCc
Confidence 345655555555544 2334 7 9999999999999999998776 6899999887543
No 96
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.21 E-value=1.3e-09 Score=94.07 Aligned_cols=122 Identities=17% Similarity=0.158 Sum_probs=80.4
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHH--HHHHHhhCCcEEEeec-cCCC
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDIL--CRRLVGTCKAVVVSVN-YRRA 150 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~--~~~la~~~g~~vv~~d-yr~~ 150 (344)
....+++|.|... +.+. |+||++||++- +... +... ..++|++.|+.|+.+| |...
T Consensus 45 ~~r~y~l~vP~g~---------------~~~a-pLvv~LHG~~~---sgag--~~~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 45 LKRSYRLYVPPGL---------------PSGA-PLVVVLHGSGG---SGAG--QLHGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CccceEEEcCCCC---------------CCCC-CEEEEEecCCC---ChHH--hhcccchhhhhcccCcEEECcCccccc
Confidence 4578889999876 2355 89999999763 2222 2222 3678888899999884 4321
Q ss_pred --CC----C----CCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 151 --PE----N----RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 151 --p~----~----~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
+. . .....++|+--..+-+.....+++||+. ||+|.|.|.||.++..++...++ .+.++..++...
T Consensus 104 wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~-RVyvtGlS~GG~Ma~~lac~~p~---~faa~A~VAg~~ 179 (312)
T COG3509 104 WNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPA-RVYVTGLSNGGRMANRLACEYPD---IFAAIAPVAGLL 179 (312)
T ss_pred cCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcc-eEEEEeeCcHHHHHHHHHhcCcc---cccceeeeeccc
Confidence 11 1 1123345554444444444456779999 99999999999999999888766 355555555433
No 97
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.19 E-value=1.2e-10 Score=95.00 Aligned_cols=208 Identities=15% Similarity=0.167 Sum_probs=121.6
Q ss_pred eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCC------
Q 019193 76 LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR------ 149 (344)
Q Consensus 76 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~------ 149 (344)
...-+|.|.... ..++. |++.|+-|- ........-.....+.|.++|++||.||-.-
T Consensus 28 Mtf~vylPp~a~-------------~~k~~-P~lf~LSGL---TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~ 90 (283)
T KOG3101|consen 28 MTFGVYLPPDAP-------------RGKRC-PVLFYLSGL---TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVA 90 (283)
T ss_pred eEEEEecCCCcc-------------cCCcC-ceEEEecCC---cccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccC
Confidence 667799998762 34567 999999992 2222222223345677888899999999641
Q ss_pred -CCC-CCC-----------CchhhHHHHHHHHHHhc------ccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCee
Q 019193 150 -APE-NRY-----------PCAYDDGWTVLKWAKSR------SWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEI 210 (344)
Q Consensus 150 -~p~-~~~-----------~~~~~D~~~a~~~l~~~------~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i 210 (344)
.+| ..| ......=+..++|+.+. .....+|+. ++.|.||||||+-|+..+++... +.
T Consensus 91 g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~-k~~IfGHSMGGhGAl~~~Lkn~~---ky 166 (283)
T KOG3101|consen 91 GDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPL-KVGIFGHSMGGHGALTIYLKNPS---KY 166 (283)
T ss_pred CCcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccch-hcceeccccCCCceEEEEEcCcc---cc
Confidence 111 011 01123335566676642 123348999 99999999999999988877654 57
Q ss_pred eEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCC-CCCCCCCCCcCCCCCCcEEEEEcCCCc
Q 019193 211 LGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPAC-NPFGPKGIDLVGVKFPKSLVVVAGLDL 289 (344)
Q Consensus 211 ~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~pP~li~~G~~D~ 289 (344)
+.+-.+.|+.+...-....+ ...-|+++....+..+. ..+. ....... --+||-.|..|.
T Consensus 167 kSvSAFAPI~NP~~cpWGqK---------------Af~gYLG~~ka~W~~yDat~li---k~y~~~~-~~ilIdqG~~D~ 227 (283)
T KOG3101|consen 167 KSVSAFAPICNPINCPWGQK---------------AFTGYLGDNKAQWEAYDATHLI---KNYRGVG-DDILIDQGAADN 227 (283)
T ss_pred cceeccccccCcccCcchHH---------------HhhcccCCChHHHhhcchHHHH---HhcCCCC-ccEEEecCccch
Confidence 77777888776443221111 11223333221111110 0000 1111111 148888999998
Q ss_pred ChHHH---HHHHHHHHHCC-CCEEEEEeCCCceEEEEC
Q 019193 290 IQDWQ---LAYMEGLKKAG-QDVKLLYLEQATIGFYFL 323 (344)
Q Consensus 290 l~~~~---~~~~~~L~~~g-~~~~~~~~~g~~H~f~~~ 323 (344)
+..+. +.+.++.+... .++.++..+|.+|.+.+.
T Consensus 228 Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyfI 265 (283)
T KOG3101|consen 228 FLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYFI 265 (283)
T ss_pred hhhhhcChHHHHHHhhccccccEEEEeecCCCcceeee
Confidence 87743 23334443322 789999999999998754
No 98
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.18 E-value=5.6e-11 Score=108.21 Aligned_cols=105 Identities=24% Similarity=0.391 Sum_probs=86.3
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC---
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA--- 150 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~--- 150 (344)
+++.+.+|.|... ..+. -|+|||.||||..|+..-+.|+. +.||..-+.+||+++||..
T Consensus 119 DCLYlNVW~P~~~---------------p~n~-tVlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FG 180 (601)
T KOG4389|consen 119 DCLYLNVWAPAAD---------------PYNL-TVLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFG 180 (601)
T ss_pred hceEEEEeccCCC---------------CCCc-eEEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccce
Confidence 4588899998522 1344 68999999999999998877764 5677766899999999943
Q ss_pred -------CCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHH
Q 019193 151 -------PENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVH 197 (344)
Q Consensus 151 -------p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~ 197 (344)
||.+---.+-|-.-|++|+++|...+|.||+ +|.|+|.|||+.-..
T Consensus 181 FL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGGnp~-~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 181 FLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGGNPS-RVTLFGESAGAASVV 233 (601)
T ss_pred EEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCCCcc-eEEEeccccchhhhh
Confidence 5666666788999999999999999999999 999999999985543
No 99
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.18 E-value=2.4e-10 Score=97.25 Aligned_cols=121 Identities=23% Similarity=0.342 Sum_probs=85.2
Q ss_pred EEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEee
Q 019193 66 FDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSV 145 (344)
Q Consensus 66 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~ 145 (344)
+++.+++++ +.+++|+-... .... |++++.||||+. .-+ |..++..+.....+.++++
T Consensus 51 edv~i~~~~-~t~n~Y~t~~~---------------~t~g-pil~l~HG~G~S---~LS--fA~~a~el~s~~~~r~~a~ 108 (343)
T KOG2564|consen 51 EDVSIDGSD-LTFNVYLTLPS---------------ATEG-PILLLLHGGGSS---ALS--FAIFASELKSKIRCRCLAL 108 (343)
T ss_pred cccccCCCc-ceEEEEEecCC---------------CCCc-cEEEEeecCccc---chh--HHHHHHHHHhhcceeEEEe
Confidence 355554433 36667764332 2355 999999999963 323 7889999999989999999
Q ss_pred ccCCCCCCCC--------CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEec
Q 019193 146 NYRRAPENRY--------PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLN 217 (344)
Q Consensus 146 dyr~~p~~~~--------~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~ 217 (344)
|.|.-.+..+ .++..|+.+.++++-.. .+. +|+|+||||||.+|...+....-+ .+.|++.+.
T Consensus 109 DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge------~~~-~iilVGHSmGGaIav~~a~~k~lp--sl~Gl~viD 179 (343)
T KOG2564|consen 109 DLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE------LPP-QIILVGHSMGGAIAVHTAASKTLP--SLAGLVVID 179 (343)
T ss_pred eccccCccccCChhhcCHHHHHHHHHHHHHHHhcc------CCC-ceEEEeccccchhhhhhhhhhhch--hhhceEEEE
Confidence 9997665543 35668888887776533 345 899999999999998877653221 366776655
No 100
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.17 E-value=6.6e-10 Score=100.77 Aligned_cols=218 Identities=15% Similarity=0.085 Sum_probs=120.9
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCC-CCCCC----chhhHHHHHH-HHHHhcccccC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP-ENRYP----CAYDDGWTVL-KWAKSRSWLQS 177 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p-~~~~~----~~~~D~~~a~-~~l~~~~~~~~ 177 (344)
.. |.||++||-| . +.. .|+..+..+....|+.|+++|...-. ..+.+ -.+.+....+ +.+.+.
T Consensus 57 ~~-~pvlllHGF~--~-~~~--~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~----- 125 (326)
T KOG1454|consen 57 DK-PPVLLLHGFG--A-SSF--SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV----- 125 (326)
T ss_pred CC-CcEEEecccc--C-Ccc--cHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-----
Confidence 45 8899999933 2 332 37888888888878999999987521 11111 1223333333 333332
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEE---EeccccCCCCCCh-hhhhhCC---------CCccCHHh--
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNI---LLNPMFGGQERTE-SEKRLDG---------KYFVTVQD-- 242 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~i---l~~p~~~~~~~~~-~~~~~~~---------~~~~~~~~-- 242 (344)
.-. ++.|+|||+||.+|+.+|...++ .+++++ ++.|......... ...+... .+......
T Consensus 126 -~~~-~~~lvghS~Gg~va~~~Aa~~P~---~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 200 (326)
T KOG1454|consen 126 -FVE-PVSLVGHSLGGIVALKAAAYYPE---TVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVR 200 (326)
T ss_pred -cCc-ceEEEEeCcHHHHHHHHHHhCcc---cccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchh
Confidence 224 79999999999999999999887 578887 4444433222111 0000000 00000000
Q ss_pred --HHHHHHHhC----CCCC-------------------CCCCCCCCCCCC---C-CCCcCCCCCCcEEEEEcCCCcChHH
Q 019193 243 --RDWYWRAYL----PEGA-------------------NRDHPACNPFGP---K-GIDLVGVKFPKSLVVVAGLDLIQDW 293 (344)
Q Consensus 243 --~~~~~~~~~----~~~~-------------------~~~~~~~~~~~~---~-~~~~~~~~~pP~li~~G~~D~l~~~ 293 (344)
....+.... .... +........... . ...+....-.|++|++|+.|.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~ 280 (326)
T KOG1454|consen 201 LVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPL 280 (326)
T ss_pred heeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCH
Confidence 000000000 0000 000000000000 0 0011111125899999999999876
Q ss_pred HHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 294 QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 294 ~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
. .++.+++....++++++++++|.-+. +..+++...+..|++++
T Consensus 281 ~--~~~~~~~~~pn~~~~~I~~~gH~~h~----e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 281 E--LAEELKKKLPNAELVEIPGAGHLPHL----ERPEEVAALLRSFIARL 324 (326)
T ss_pred H--HHHHHHhhCCCceEEEeCCCCccccc----CCHHHHHHHHHHHHHHh
Confidence 4 45666655578899999999996553 45788999999999875
No 101
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.16 E-value=1.8e-09 Score=100.59 Aligned_cols=62 Identities=16% Similarity=0.096 Sum_probs=48.3
Q ss_pred CcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEEEeC-CCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 278 PKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLE-QATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 278 pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~~-g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
.|+|+++|+.|.+++ ..+.+++.+...+..+++.+++ +++|...+ ++.+++.+.+.+||++.
T Consensus 310 ~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l----e~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 310 ARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL----LDDPRYGRLVRAFLERA 374 (379)
T ss_pred CCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh----cCHHHHHHHHHHHHHhh
Confidence 489999999998754 4567788888777778888885 99997543 34667889999999753
No 102
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.16 E-value=6.3e-10 Score=111.50 Aligned_cols=206 Identities=15% Similarity=0.061 Sum_probs=120.4
Q ss_pred HHHHHHHhhCCcEEEeeccCCCCCC-----C-CCchhhHHHHHHHHHHhcccc-----------cCCCCCCeEEEeeCCc
Q 019193 129 ILCRRLVGTCKAVVVSVNYRRAPEN-----R-YPCAYDDGWTVLKWAKSRSWL-----------QSKDSKAHIYLAGDSS 191 (344)
Q Consensus 129 ~~~~~la~~~g~~vv~~dyr~~p~~-----~-~~~~~~D~~~a~~~l~~~~~~-----------~~~d~~~~i~l~G~Sa 191 (344)
.+...++.+ ||+|+.+|.|..... . .+...+|+.++++|+..+... ..-..+ +|+++|.|+
T Consensus 270 ~~~~~~~~r-GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG-kVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPR-GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNG-KVAMTGKSY 347 (767)
T ss_pred hHHHHHHhC-CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCC-eeEEEEEcH
Confidence 345678887 999999999965332 1 245679999999999965221 111246 999999999
Q ss_pred hHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhh--hhhCCC-CccCHHhH-----------------HHHHHHhC
Q 019193 192 GGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESE--KRLDGK-YFVTVQDR-----------------DWYWRAYL 251 (344)
Q Consensus 192 GG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~--~~~~~~-~~~~~~~~-----------------~~~~~~~~ 251 (344)
||.++..+|...+. .++++|..+++.+........ ...... ........ ...+..+.
T Consensus 348 ~G~~~~~aAa~~pp---~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~ 424 (767)
T PRK05371 348 LGTLPNAVATTGVE---GLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLL 424 (767)
T ss_pred HHHHHHHHHhhCCC---cceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHH
Confidence 99999988876544 588888888776532211000 000000 00000000 00001000
Q ss_pred C---CCCCCCCCCCCCCCCCC---CCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEEEeCCCceEEEEC
Q 019193 252 P---EGANRDHPACNPFGPKG---IDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGFYFL 323 (344)
Q Consensus 252 ~---~~~~~~~~~~~~~~~~~---~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~ 323 (344)
. ...+...+..+.+.... .....+ ..|+|++||..|..+. ++.++.++|++.+++.++.+.++ +|.....
T Consensus 425 ~~~~~~~~~~~~~y~~fW~~rn~~~~~~kI-kvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~ 502 (767)
T PRK05371 425 AELTAAQDRKTGDYNDFWDDRNYLKDADKI-KASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPNN 502 (767)
T ss_pred hhhhhhhhhcCCCccHHHHhCCHhhHhhCC-CCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCc
Confidence 0 00000001111110000 111111 3489999999998875 56788999999999999988776 6854321
Q ss_pred CCchHHHHHHHHHHHHHhccC
Q 019193 324 PNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 324 ~~~~~~~~~~~~~~~fl~~~l 344 (344)
....+..+.+.+|+.++|
T Consensus 503 ---~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 503 ---WQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred ---hhHHHHHHHHHHHHHhcc
Confidence 235667888899998775
No 103
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.15 E-value=8.9e-10 Score=91.12 Aligned_cols=160 Identities=18% Similarity=0.176 Sum_probs=115.4
Q ss_pred hHHHHHHHHhhCCcEEEeeccCCC----CC------------CCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCC
Q 019193 127 YDILCRRLVGTCKAVVVSVNYRRA----PE------------NRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDS 190 (344)
Q Consensus 127 ~~~~~~~la~~~g~~vv~~dyr~~----p~------------~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~S 190 (344)
-+..+..+|.. ||.|+.|||-.. |+ +..+....|+...++|++.+ .+.. +|.++|.+
T Consensus 56 ~r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~-----g~~k-kIGv~GfC 128 (242)
T KOG3043|consen 56 TREGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH-----GDSK-KIGVVGFC 128 (242)
T ss_pred HHHHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc-----CCcc-eeeEEEEe
Confidence 36678888888 999999997533 22 23345568999999999977 4567 99999999
Q ss_pred chHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 019193 191 SGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGI 270 (344)
Q Consensus 191 aGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (344)
+||.++..+....+ .+.+.++.+|.+-... + ..
T Consensus 129 wGak~vv~~~~~~~----~f~a~v~~hps~~d~~----------------------------------D---------~~ 161 (242)
T KOG3043|consen 129 WGAKVVVTLSAKDP----EFDAGVSFHPSFVDSA----------------------------------D---------IA 161 (242)
T ss_pred ecceEEEEeeccch----hheeeeEecCCcCChh----------------------------------H---------Hh
Confidence 99988876655432 4788888888542100 0 01
Q ss_pred CcCCCCCCcEEEEEcCCCcChHH--HHHHHHHHHHCC-CCEEEEEeCCCceEEEEC---CCc----hHHHHHHHHHHHHH
Q 019193 271 DLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAG-QDVKLLYLEQATIGFYFL---PNN----GHFYTVMDEISNFV 340 (344)
Q Consensus 271 ~~~~~~~pP~li~~G~~D~l~~~--~~~~~~~L~~~g-~~~~~~~~~g~~H~f~~~---~~~----~~~~~~~~~~~~fl 340 (344)
... .|++++.|+.|.+++. -.++.++|++.. +..++++|+|..|+|... ... ...+++++++..|+
T Consensus 162 ~vk----~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf 237 (242)
T KOG3043|consen 162 NVK----APILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWF 237 (242)
T ss_pred cCC----CCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHH
Confidence 112 3899999999988654 356667777653 447899999999999852 222 34678899999999
Q ss_pred hccC
Q 019193 341 SCNY 344 (344)
Q Consensus 341 ~~~l 344 (344)
.+++
T Consensus 238 ~~y~ 241 (242)
T KOG3043|consen 238 KHYL 241 (242)
T ss_pred HHhh
Confidence 8764
No 104
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.12 E-value=6.3e-10 Score=100.04 Aligned_cols=133 Identities=17% Similarity=0.090 Sum_probs=78.6
Q ss_pred CCceEEEEEEeCCCC--eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccc----cCC---------Cch
Q 019193 61 DGVFSFDVIVDRGTN--LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAH----SSA---------NSA 125 (344)
Q Consensus 61 ~~~~~~~~~~~~~~~--~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~----g~~---------~~~ 125 (344)
++.+.+.+.+....+ ++..++.|++. +.+. |+||.+||-|... |.. ...
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~---------------~~p~-PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~ 147 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA---------------KGPF-PAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDD 147 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT-----------------S-E-EEEEEE--TT--HHHHCT---SSGCG--STTS
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC---------------CCCC-CEEEEeCCCCCCcccccCCcccccccchhhcc
Confidence 345555666655444 77788899885 3578 9999999944211 111 001
Q ss_pred hhHHHHHHHHhhCCcEEEeeccCCCCC-----CCCC------ch----------------hhHHHHHHHHHHhcccccCC
Q 019193 126 IYDILCRRLVGTCKAVVVSVNYRRAPE-----NRYP------CA----------------YDDGWTVLKWAKSRSWLQSK 178 (344)
Q Consensus 126 ~~~~~~~~la~~~g~~vv~~dyr~~p~-----~~~~------~~----------------~~D~~~a~~~l~~~~~~~~~ 178 (344)
....++..||++ ||+|+++|-....| .... .. .-|...+++|+..... +
T Consensus 148 ~~~~~g~~LAk~-GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpe---V 223 (390)
T PF12715_consen 148 PKQDYGDQLAKR-GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPE---V 223 (390)
T ss_dssp TTT-HHHHHHTT-TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TT---E
T ss_pred ccccHHHHHHhC-CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcc---c
Confidence 123468899988 99999999764322 1100 00 1255568889888877 9
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 179 DSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 179 d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
|++ ||.++|+|+||..++.++.... +|++.+..+-
T Consensus 224 D~~-RIG~~GfSmGg~~a~~LaALDd----RIka~v~~~~ 258 (390)
T PF12715_consen 224 DPD-RIGCMGFSMGGYRAWWLAALDD----RIKATVANGY 258 (390)
T ss_dssp EEE-EEEEEEEGGGHHHHHHHHHH-T----T--EEEEES-
T ss_pred Ccc-ceEEEeecccHHHHHHHHHcch----hhHhHhhhhh
Confidence 999 9999999999999998887643 5777766543
No 105
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.11 E-value=2.1e-09 Score=88.19 Aligned_cols=188 Identities=17% Similarity=0.190 Sum_probs=112.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC-------CCchhhHHHHHHHHHHhcccccCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-------YPCAYDDGWTVLKWAKSRSWLQSKD 179 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-------~~~~~~D~~~a~~~l~~~~~~~~~d 179 (344)
-++|++|| |. .++........+.++++. |+.++.+||+...+.. +....+|...+++++.+..
T Consensus 34 e~vvlcHG--fr-S~Kn~~~~~~vA~~~e~~-gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n------ 103 (269)
T KOG4667|consen 34 EIVVLCHG--FR-SHKNAIIMKNVAKALEKE-GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN------ 103 (269)
T ss_pred eEEEEeec--cc-cccchHHHHHHHHHHHhc-CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc------
Confidence 78999999 32 233332233456667766 9999999999765532 2344599999999997742
Q ss_pred CCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHH-hC--CC--C
Q 019193 180 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRA-YL--PE--G 254 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~--~ 254 (344)
.. =-+|.|||-||..++..+.+..+ ++-+|..++-.+...... .+.. ....++..+. |+ ++ +
T Consensus 104 r~-v~vi~gHSkGg~Vvl~ya~K~~d----~~~viNcsGRydl~~~I~--eRlg------~~~l~~ike~Gfid~~~rkG 170 (269)
T KOG4667|consen 104 RV-VPVILGHSKGGDVVLLYASKYHD----IRNVINCSGRYDLKNGIN--ERLG------EDYLERIKEQGFIDVGPRKG 170 (269)
T ss_pred eE-EEEEEeecCccHHHHHHHHhhcC----chheEEcccccchhcchh--hhhc------ccHHHHHHhCCceecCcccC
Confidence 12 34689999999999999998866 666777777665433211 0000 0011111110 00 00 0
Q ss_pred --CCCCCCCC------CCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEEEeCCCceEEEEC
Q 019193 255 --ANRDHPAC------NPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGFYFL 323 (344)
Q Consensus 255 --~~~~~~~~------~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~ 323 (344)
..+..+.+ .-..+....++. ..|+|-+||..|.++| ++..|++.+.. .+++++||++|.|...
T Consensus 171 ~y~~rvt~eSlmdrLntd~h~aclkId~--~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 171 KYGYRVTEESLMDRLNTDIHEACLKIDK--QCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHNYTGH 243 (269)
T ss_pred CcCceecHHHHHHHHhchhhhhhcCcCc--cCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcCccch
Confidence 00000000 000011122222 6699999999998765 56677777664 6899999999998743
No 106
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.11 E-value=1.4e-09 Score=96.60 Aligned_cols=107 Identities=19% Similarity=0.209 Sum_probs=75.3
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCch-------hhHHHHHHHHHHhccccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA-------YDDGWTVLKWAKSRSWLQ 176 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~-------~~D~~~a~~~l~~~~~~~ 176 (344)
.. |++|++||.+ ++....++..+...+..+.++.|+++||+......++.. .+++...++++.+..
T Consensus 35 ~~-p~vilIHG~~---~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~--- 107 (275)
T cd00707 35 SR-PTRFIIHGWT---SSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNT--- 107 (275)
T ss_pred CC-CcEEEEcCCC---CCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhc---
Confidence 45 9999999933 233233344555555554489999999987644444432 245666677766542
Q ss_pred CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 177 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 177 ~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
+++.+ +|.|+|||+||++|..++.+.++ ++..++++.|...
T Consensus 108 g~~~~-~i~lIGhSlGa~vAg~~a~~~~~---~v~~iv~LDPa~p 148 (275)
T cd00707 108 GLSLE-NVHLIGHSLGAHVAGFAGKRLNG---KLGRITGLDPAGP 148 (275)
T ss_pred CCChH-HEEEEEecHHHHHHHHHHHHhcC---ccceeEEecCCcc
Confidence 25667 99999999999999999988765 6899999987643
No 107
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.10 E-value=8.6e-10 Score=103.15 Aligned_cols=236 Identities=17% Similarity=0.177 Sum_probs=149.2
Q ss_pred EEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeec
Q 019193 67 DVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 67 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d 146 (344)
..+-.++..+++=|.. ++.+ .++. |++||-.|| |-+ +. ...|......+.++ |-+.+..|
T Consensus 398 ~atSkDGT~IPYFiv~-K~~~--------------~d~~-pTll~aYGG-F~v-sl-tP~fs~~~~~WLer-Gg~~v~AN 457 (648)
T COG1505 398 FATSKDGTRIPYFIVR-KGAK--------------KDEN-PTLLYAYGG-FNI-SL-TPRFSGSRKLWLER-GGVFVLAN 457 (648)
T ss_pred EEEcCCCccccEEEEe-cCCc--------------CCCC-ceEEEeccc-ccc-cc-CCccchhhHHHHhc-CCeEEEEe
Confidence 3333344558877766 5531 2366 998888875 433 22 22256666777777 99999999
Q ss_pred cCCCCCCC-----------CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEE
Q 019193 147 YRRAPENR-----------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNIL 215 (344)
Q Consensus 147 yr~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il 215 (344)
-|...|.. -....+|-.++.+++.++.- -.|+ ++.+.|.|-||-|......+.++ .+.++++
T Consensus 458 IRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgi---tspe-~lgi~GgSNGGLLvg~alTQrPe---lfgA~v~ 530 (648)
T COG1505 458 IRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGI---TSPE-KLGIQGGSNGGLLVGAALTQRPE---LFGAAVC 530 (648)
T ss_pred cccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCC---CCHH-HhhhccCCCCceEEEeeeccChh---hhCceee
Confidence 99876642 23456999999999999865 5788 99999999999887765555454 5788888
Q ss_pred eccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCC-CCCCcEEEEEcCCCcC-hH-
Q 019193 216 LNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVG-VKFPKSLVVVAGLDLI-QD- 292 (344)
Q Consensus 216 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pP~li~~G~~D~l-~~- 292 (344)
-.|.+|+-.... +... ..+...|-..+...+-..+..++|. .+++. .+.||+||.++..|.- .|
T Consensus 531 evPllDMlRYh~----l~aG--------~sW~~EYG~Pd~P~d~~~l~~YSPy-~nl~~g~kYP~~LITTs~~DDRVHPa 597 (648)
T COG1505 531 EVPLLDMLRYHL----LTAG--------SSWIAEYGNPDDPEDRAFLLAYSPY-HNLKPGQKYPPTLITTSLHDDRVHPA 597 (648)
T ss_pred ccchhhhhhhcc----cccc--------hhhHhhcCCCCCHHHHHHHHhcCch-hcCCccccCCCeEEEcccccccccch
Confidence 899988644211 0000 0011112110000000011111111 22332 3389999999998854 44
Q ss_pred HHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 293 WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 293 ~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
.+..|+.+|++.|.++-+.+--+++|+--. + ..+.-.....+..||.+.|
T Consensus 598 HarKfaa~L~e~~~pv~~~e~t~gGH~g~~-~-~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 598 HARKFAAKLQEVGAPVLLREETKGGHGGAA-P-TAEIARELADLLAFLLRTL 647 (648)
T ss_pred HHHHHHHHHHhcCCceEEEeecCCcccCCC-C-hHHHHHHHHHHHHHHHHhh
Confidence 469999999999999999999999996421 1 2233445566677887765
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.08 E-value=6.7e-10 Score=98.75 Aligned_cols=125 Identities=18% Similarity=0.219 Sum_probs=84.5
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhH-------HHHHHHHhhCCcEEEeec
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYD-------ILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~-------~~~~~la~~~g~~vv~~d 146 (344)
..|.+++|+| +. ...++. |+||..|+-|-- ........ .....++++ ||+||.+|
T Consensus 3 v~L~adv~~P-~~-------------~~~~~~-P~il~~tpY~~~--~~~~~~~~~~~~~~~~~~~~~~~~-GY~vV~~D 64 (272)
T PF02129_consen 3 VRLAADVYRP-GA-------------DGGGPF-PVILTRTPYGKG--DQTASDLAGANPGPPSARRPFAER-GYAVVVQD 64 (272)
T ss_dssp -EEEEEEEEE----------------TTSSSE-EEEEEEESSTCT--C-HHHHHHTTCHHSHGGGHHHHHT-T-EEEEEE
T ss_pred CEEEEEEEec-CC-------------CCCCcc-cEEEEccCcCCC--CCcccchhhhhcccchhHHHHHhC-CCEEEEEC
Confidence 4588899999 22 124688 999999995521 10000000 001127777 99999999
Q ss_pred cCCCCCC-----C-CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 147 YRRAPEN-----R-YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 147 yr~~p~~-----~-~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
.|..... + .+...+|..++++|+.++.. +.. +|.++|.|.+|..++.+|...+ +.+++++..+++.
T Consensus 65 ~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpw----s~G-~VGm~G~SY~G~~q~~~A~~~~---p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 65 VRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPW----SNG-KVGMYGISYGGFTQWAAAARRP---PHLKAIVPQSGWS 136 (272)
T ss_dssp -TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTT----EEE-EEEEEEETHHHHHHHHHHTTT----TTEEEEEEESE-S
T ss_pred CcccccCCCccccCChhHHHHHHHHHHHHHhCCC----CCC-eEEeeccCHHHHHHHHHHhcCC---CCceEEEecccCC
Confidence 9965321 2 45677999999999999854 445 9999999999999999887543 3699999998887
Q ss_pred CCCC
Q 019193 221 GGQE 224 (344)
Q Consensus 221 ~~~~ 224 (344)
|...
T Consensus 137 d~~~ 140 (272)
T PF02129_consen 137 DLYR 140 (272)
T ss_dssp BTCC
T ss_pred cccc
Confidence 7655
No 109
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.07 E-value=3.1e-08 Score=95.00 Aligned_cols=125 Identities=14% Similarity=0.173 Sum_probs=80.7
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCC---cccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGG---SFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA 150 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGG---g~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~ 150 (344)
..+.+.-|.|.... ... +-||++||- .|+. .... .+.+++.|+++ |+.|+.+|+|..
T Consensus 172 ~~~eLi~Y~P~t~~---------------~~~-~PlLiVp~~i~k~yil-DL~p--~~Slv~~L~~q-Gf~V~~iDwrgp 231 (532)
T TIGR01838 172 ELFQLIQYEPTTET---------------VHK-TPLLIVPPWINKYYIL-DLRP--QNSLVRWLVEQ-GHTVFVISWRNP 231 (532)
T ss_pred CcEEEEEeCCCCCc---------------CCC-CcEEEECcccccceee-eccc--chHHHHHHHHC-CcEEEEEECCCC
Confidence 34677778777541 133 558899982 2332 1111 25789999988 999999999964
Q ss_pred CCC----CCCchh-hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHH-Hhccc-CCeeeEEEEeccccCCC
Q 019193 151 PEN----RYPCAY-DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVAL-RAVES-EVEILGNILLNPMFGGQ 223 (344)
Q Consensus 151 p~~----~~~~~~-~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~-~~~~~-~~~i~~~il~~p~~~~~ 223 (344)
... .+.+-. +++.++++.+.+. .+.+ ++.++|+|+||.+++.++. ..... ..++++++++...+|..
T Consensus 232 g~s~~~~~~ddY~~~~i~~al~~v~~~-----~g~~-kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 232 DASQADKTFDDYIRDGVIAALEVVEAI-----TGEK-QVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred CcccccCChhhhHHHHHHHHHHHHHHh-----cCCC-CeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC
Confidence 322 122223 4577888888765 3445 8999999999999754222 11111 23689999888777755
Q ss_pred C
Q 019193 224 E 224 (344)
Q Consensus 224 ~ 224 (344)
.
T Consensus 306 ~ 306 (532)
T TIGR01838 306 D 306 (532)
T ss_pred C
Confidence 4
No 110
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.07 E-value=6.7e-09 Score=91.35 Aligned_cols=220 Identities=16% Similarity=0.087 Sum_probs=123.7
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC------CCCCchhhHHHHHHHHHHhccccc
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE------NRYPCAYDDGWTVLKWAKSRSWLQ 176 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~------~~~~~~~~D~~~a~~~l~~~~~~~ 176 (344)
.+. |.++.+|| ..|+... |..+.+.|++..+.-|+++|-|.-.. +.+.++.+|+...+++......
T Consensus 50 ~~~-Pp~i~lHG---l~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~-- 121 (315)
T KOG2382|consen 50 ERA-PPAIILHG---LLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTR-- 121 (315)
T ss_pred CCC-CceEEecc---cccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccc--
Confidence 355 88999999 6678755 79999999999999999999995433 3344566777777777654322
Q ss_pred CCCCCCeEEEeeCCchH-HHHHHHHHHhcccCCeeeEEE--EeccccCCCCCChh---hhhhCCCCcc------------
Q 019193 177 SKDSKAHIYLAGDSSGG-NIVHHVALRAVESEVEILGNI--LLNPMFGGQERTES---EKRLDGKYFV------------ 238 (344)
Q Consensus 177 ~~d~~~~i~l~G~SaGG-~lA~~~a~~~~~~~~~i~~~i--l~~p~~~~~~~~~~---~~~~~~~~~~------------ 238 (344)
-. ++.|.|||||| -+++..+...++. +..+| -++|..-....... .......+..
T Consensus 122 ---~~-~~~l~GHsmGG~~~~m~~t~~~p~~---~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~ 194 (315)
T KOG2382|consen 122 ---LD-PVVLLGHSMGGVKVAMAETLKKPDL---IERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALK 194 (315)
T ss_pred ---cC-CceecccCcchHHHHHHHHHhcCcc---cceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHH
Confidence 23 89999999999 5555555554442 32222 35563111111100 0000000000
Q ss_pred ------CHHhHHHHHHHhCCCCC--CCCCCCCCC------CC-----CCCCCcCCCC-CCcEEEEEcCCCcChHHHHHHH
Q 019193 239 ------TVQDRDWYWRAYLPEGA--NRDHPACNP------FG-----PKGIDLVGVK-FPKSLVVVAGLDLIQDWQLAYM 298 (344)
Q Consensus 239 ------~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~-----~~~~~~~~~~-~pP~li~~G~~D~l~~~~~~~~ 298 (344)
.......+....+.... ..-.+.++. +. ....++.... .-||++++|.++.+++.. ..
T Consensus 195 ~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~--~~ 272 (315)
T KOG2382|consen 195 SLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDE--HY 272 (315)
T ss_pred HHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChh--HH
Confidence 00011111111121100 000000000 00 0001111111 449999999999988753 22
Q ss_pred HHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 299 EGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 299 ~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
.+++..-..++++.+++++|..+. +..++.++.+.+|+.++
T Consensus 273 ~~~~~~fp~~e~~~ld~aGHwVh~----E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 273 PRMEKIFPNVEVHELDEAGHWVHL----EKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHHHhccchheeecccCCceeec----CCHHHHHHHHHHHhccc
Confidence 344444445899999999997764 45778999999999865
No 111
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.06 E-value=2.8e-09 Score=95.27 Aligned_cols=208 Identities=15% Similarity=0.069 Sum_probs=114.1
Q ss_pred HHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHH---HHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhc
Q 019193 128 DILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVL---KWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 204 (344)
Q Consensus 128 ~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~---~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~ 204 (344)
..+...+.++ ||+|+++||.. +..+|........+++ +..++.....++..+.+++++|+|.||+-++..+...+
T Consensus 16 ~~~l~~~L~~-GyaVv~pDY~G-lg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~ 93 (290)
T PF03583_consen 16 APFLAAWLAR-GYAVVAPDYEG-LGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAP 93 (290)
T ss_pred HHHHHHHHHC-CCEEEecCCCC-CCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhH
Confidence 3456667766 99999999964 3447755554444444 44444433334444338999999999999887665443
Q ss_pred c--cCCe--eeEEEEeccccCCCCCChhhhh-------------h-CCCCcc--------CHHh---HHHH--------H
Q 019193 205 E--SEVE--ILGNILLNPMFGGQERTESEKR-------------L-DGKYFV--------TVQD---RDWY--------W 247 (344)
Q Consensus 205 ~--~~~~--i~~~il~~p~~~~~~~~~~~~~-------------~-~~~~~~--------~~~~---~~~~--------~ 247 (344)
+ .... +.|.+...|..+.......... . ...+-+ .... ++.. .
T Consensus 94 ~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~~ 173 (290)
T PF03583_consen 94 SYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADIV 173 (290)
T ss_pred HhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHHH
Confidence 2 2345 8899888887653321110000 0 000000 0000 0000 0
Q ss_pred HHhCCCCC----CCC-CCCCCCCC-----CC--CCCc---CCCC-CCcEEEEEcCCCcChH--HHHHHHHHHHHCC-CCE
Q 019193 248 RAYLPEGA----NRD-HPACNPFG-----PK--GIDL---VGVK-FPKSLVVVAGLDLIQD--WQLAYMEGLKKAG-QDV 308 (344)
Q Consensus 248 ~~~~~~~~----~~~-~~~~~~~~-----~~--~~~~---~~~~-~pP~li~~G~~D~l~~--~~~~~~~~L~~~g-~~~ 308 (344)
..+..... ... .+...++. .. ...+ .... ..|++|.||..|.++| ....+++++++.| .+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V 253 (290)
T PF03583_consen 174 AEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADV 253 (290)
T ss_pred HHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCE
Confidence 00000000 000 00000000 00 0111 1111 3389999999998876 4588999999999 899
Q ss_pred EEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 309 KLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 309 ~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
+++.+++..|.-... ....+.++||.++|
T Consensus 254 ~~~~~~~~~H~~~~~-------~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 254 EYVRYPGGGHLGAAF-------ASAPDALAWLDDRF 282 (290)
T ss_pred EEEecCCCChhhhhh-------cCcHHHHHHHHHHH
Confidence 999999999964322 24456778887654
No 112
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.03 E-value=6.2e-10 Score=97.69 Aligned_cols=208 Identities=13% Similarity=0.077 Sum_probs=115.4
Q ss_pred CeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcC-CcccccCCCchhhHHHHHHHHhhC---CcEEEeeccCCC
Q 019193 75 NLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHG-GSFAHSSANSAIYDILCRRLVGTC---KAVVVSVNYRRA 150 (344)
Q Consensus 75 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HG-Gg~~~g~~~~~~~~~~~~~la~~~---g~~vv~~dyr~~ 150 (344)
...+.||.|.+. .+.++. |+|+++|| ++|..... .......+..+. ..++|.++....
T Consensus 7 ~~~~~VylP~~y-------------~~~~~~-PvlylldG~~~~~~~~~----~~~~~~~~~~~~~~~~~iiV~i~~~~~ 68 (251)
T PF00756_consen 7 DRRVWVYLPPGY-------------DPSKPY-PVLYLLDGQSGWFRNGN----AQEALDRLIAEGKIPPMIIVVIPNGDN 68 (251)
T ss_dssp EEEEEEEECTTG-------------GTTTTE-EEEEEESHTTHHHHHHH----HHHHHHHHHHHHTSEEEEEEEEESSST
T ss_pred eEEEEEEECCCC-------------CCCCCC-EEEEEccCCccccccch----HHHHHHHHHHhCCCCceEEEEEecccc
Confidence 367789999883 125688 99999999 66643111 223334444441 245555554322
Q ss_pred C----CCC--------CC-----chhhH-H-HHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeee
Q 019193 151 P----ENR--------YP-----CAYDD-G-WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEIL 211 (344)
Q Consensus 151 p----~~~--------~~-----~~~~D-~-~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~ 211 (344)
. ... .. ....+ + .+++.++.++ +.++++ +.+|+|+|+||..|+.++.+.++ .+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~p~i~~~---~~~~~~-~~~i~G~S~GG~~Al~~~l~~Pd---~F~ 141 (251)
T PF00756_consen 69 SRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELIPYIEAN---YRTDPD-RRAIAGHSMGGYGALYLALRHPD---LFG 141 (251)
T ss_dssp SSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHHHHHHHH---SSEEEC-CEEEEEETHHHHHHHHHHHHSTT---TES
T ss_pred cccccccccccccccccccCCCCcccceehhccchhHHHHh---cccccc-eeEEeccCCCcHHHHHHHHhCcc---ccc
Confidence 1 000 00 11111 1 2345555554 336666 69999999999999999999887 699
Q ss_pred EEEEeccccCCCCCChhhhhhCCCC-ccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcC
Q 019193 212 GNILLNPMFGGQERTESEKRLDGKY-FVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLI 290 (344)
Q Consensus 212 ~~il~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l 290 (344)
+++++||.++.... ........ +............. ......++++.+|+.|..
T Consensus 142 ~~~~~S~~~~~~~~---~w~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~i~l~~G~~d~~ 196 (251)
T PF00756_consen 142 AVIAFSGALDPSPS---LWGPSDDEAWKENDPFDLIKALS----------------------QKKKPLRIYLDVGTKDEF 196 (251)
T ss_dssp EEEEESEESETTHC---HHHHSTCGHHGGCHHHHHHHHHH----------------------HTTSEEEEEEEEETTSTT
T ss_pred cccccCcccccccc---ccCcCCcHHhhhccHHHHhhhhh----------------------cccCCCeEEEEeCCCCcc
Confidence 99999998765410 00000000 00000000000000 000023799999999973
Q ss_pred h------------HHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHH
Q 019193 291 Q------------DWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNF 339 (344)
Q Consensus 291 ~------------~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~f 339 (344)
. .....+.+.|+..|++..++.++| .|.+. .-+..+.+.+.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~G-~H~~~------~W~~~l~~~L~~ 250 (251)
T PF00756_consen 197 GGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFPG-GHDWA------YWRRRLPDALPW 250 (251)
T ss_dssp HHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEHS-ESSHH------HHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEecC-ccchh------hHHHHHHHHHhh
Confidence 2 223444555666788889999994 78663 234455555554
No 113
>PRK05855 short chain dehydrogenase; Validated
Probab=99.01 E-value=1.7e-08 Score=99.41 Aligned_cols=80 Identities=19% Similarity=0.203 Sum_probs=53.0
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC---------CCchhhHHHHHHHHHHhcccccC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR---------YPCAYDDGWTVLKWAKSRSWLQS 177 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~---------~~~~~~D~~~a~~~l~~~~~~~~ 177 (344)
|+||++||.+. +. ..|..+...| .+ ++.|+++|+|...... +....+|+.++++.+.
T Consensus 26 ~~ivllHG~~~---~~--~~w~~~~~~L-~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~------- 91 (582)
T PRK05855 26 PTVVLVHGYPD---NH--EVWDGVAPLL-AD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVS------- 91 (582)
T ss_pred CeEEEEcCCCc---hH--HHHHHHHHHh-hc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhC-------
Confidence 88999999552 22 2367777777 34 8999999999654332 1223344444444321
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHH
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~ 202 (344)
. .. ++.|+|||+||.+++.++.+
T Consensus 92 ~-~~-~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 92 P-DR-PVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred C-CC-cEEEEecChHHHHHHHHHhC
Confidence 1 13 59999999999998877665
No 114
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.96 E-value=2.6e-08 Score=84.16 Aligned_cols=211 Identities=13% Similarity=0.006 Sum_probs=114.2
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 186 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l 186 (344)
.++.+=|-|| +... |..+.+++-. .+.++.+.|+.-....-.....|+.+..+-+.....- ..--. ...+
T Consensus 9 ~L~cfP~AGG----sa~~--fr~W~~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~-~~~d~-P~al 78 (244)
T COG3208 9 RLFCFPHAGG----SASL--FRSWSRRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP-PLLDA-PFAL 78 (244)
T ss_pred eEEEecCCCC----CHHH--HHHHHhhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc-ccCCC-Ceee
Confidence 4566666666 3332 7777776543 5889999998654443444556666666666554221 11123 7999
Q ss_pred eeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhh------------hhhCCCC---ccCHHhHHHHHHHhC
Q 019193 187 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESE------------KRLDGKY---FVTVQDRDWYWRAYL 251 (344)
Q Consensus 187 ~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~------------~~~~~~~---~~~~~~~~~~~~~~~ 251 (344)
.||||||.+|..+|.+....+..+.+++..+.-.-........ ....+-+ +-..+.+..+....-
T Consensus 79 fGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilR 158 (244)
T COG3208 79 FGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILR 158 (244)
T ss_pred cccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHH
Confidence 9999999999999999987776677666554221111110000 0111111 111222222221110
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHH
Q 019193 252 PEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYT 331 (344)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~ 331 (344)
.+-.........+- ..+ -.|+.++.|++|..+..... ..--+..+.+.+++.++| +|.|.. +...+
T Consensus 159 AD~~~~e~Y~~~~~----~pl----~~pi~~~~G~~D~~vs~~~~-~~W~~~t~~~f~l~~fdG-gHFfl~----~~~~~ 224 (244)
T COG3208 159 ADFRALESYRYPPP----APL----ACPIHAFGGEKDHEVSRDEL-GAWREHTKGDFTLRVFDG-GHFFLN----QQREE 224 (244)
T ss_pred HHHHHhcccccCCC----CCc----CcceEEeccCcchhccHHHH-HHHHHhhcCCceEEEecC-cceehh----hhHHH
Confidence 00000000000000 111 23899999999988765432 222234556889999997 997642 34556
Q ss_pred HHHHHHHHHh
Q 019193 332 VMDEISNFVS 341 (344)
Q Consensus 332 ~~~~~~~fl~ 341 (344)
+.+.+.+.+.
T Consensus 225 v~~~i~~~l~ 234 (244)
T COG3208 225 VLARLEQHLA 234 (244)
T ss_pred HHHHHHHHhh
Confidence 6666666654
No 115
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.94 E-value=1.2e-08 Score=96.74 Aligned_cols=189 Identities=17% Similarity=0.154 Sum_probs=126.1
Q ss_pred CCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCC-----------CchhhHHHHHHHHHH
Q 019193 102 SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-----------PCAYDDGWTVLKWAK 170 (344)
Q Consensus 102 ~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~-----------~~~~~D~~~a~~~l~ 170 (344)
+.+. |+++|--|.- |......+...+-.|..+ |++..+..-|...+-.. -....|..++.++|.
T Consensus 445 ~g~~-p~lLygYGaY---G~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv 519 (682)
T COG1770 445 DGSA-PLLLYGYGAY---GISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLV 519 (682)
T ss_pred CCCC-cEEEEEeccc---cccCCcCcccceeeeecC-ceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHH
Confidence 4566 9999999843 333333355566677888 99999999897665332 134589999999999
Q ss_pred hcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCC--h------hhhhhCCCCccCHHh
Q 019193 171 SRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT--E------SEKRLDGKYFVTVQD 242 (344)
Q Consensus 171 ~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~--~------~~~~~~~~~~~~~~~ 242 (344)
++.. .+++ +|+++|.||||.|...++.+.++ .++|+|+-.|++|.-... + .+...-+.|. ...
T Consensus 520 ~~g~---~~~~-~i~a~GGSAGGmLmGav~N~~P~---lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~-d~e- 590 (682)
T COG1770 520 KEGY---TSPD-RIVAIGGSAGGMLMGAVANMAPD---LFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPL-DPE- 590 (682)
T ss_pred HcCc---CCcc-ceEEeccCchhHHHHHHHhhChh---hhhheeecCCccchhhhhcCCCCCCCccchhhhCCcC-CHH-
Confidence 9876 7888 99999999999999999988777 689999999998743311 0 0111111111 111
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCC---CEEEEEeCCCc
Q 019193 243 RDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQ---DVKLLYLEQAT 317 (344)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~---~~~~~~~~g~~ 317 (344)
.-.+...| +|+ .+++....|++|+.+|-.|+-+. +..++..+|++.+. ++-+..=.+++
T Consensus 591 ~y~yikSY------------SPY----dNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aG 654 (682)
T COG1770 591 YYDYIKSY------------SPY----DNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAG 654 (682)
T ss_pred HHHHHhhc------------Cch----hccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEeccccc
Confidence 11122222 221 23333338999999999997653 56788889987653 45555556789
Q ss_pred eEE
Q 019193 318 IGF 320 (344)
Q Consensus 318 H~f 320 (344)
|+=
T Consensus 655 HgG 657 (682)
T COG1770 655 HGG 657 (682)
T ss_pred CCC
Confidence 963
No 116
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.92 E-value=6.7e-08 Score=100.81 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=73.2
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHH-----HHHHHHhhCCcEEEeeccC
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDI-----LCRRLVGTCKAVVVSVNYR 148 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~-----~~~~la~~~g~~vv~~dyr 148 (344)
+.+.++-|.|..... ..+... |.||++||.+ . +... |+. +...|+++ |+.|+++|+.
T Consensus 47 ~~~~l~~y~~~~~~~-----------~~~~~~-~plllvhg~~--~-~~~~--~d~~~~~s~v~~L~~~-g~~v~~~d~G 108 (994)
T PRK07868 47 PMYRLRRYFPPDNRP-----------GQPPVG-PPVLMVHPMM--M-SADM--WDVTRDDGAVGILHRA-GLDPWVIDFG 108 (994)
T ss_pred CcEEEEEeCCCCccc-----------cccCCC-CcEEEECCCC--C-Cccc--eecCCcccHHHHHHHC-CCEEEEEcCC
Confidence 457888888876410 001244 7899999933 1 2111 332 46778877 9999999986
Q ss_pred CCCCC--CCC-chhhHH---HHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCC
Q 019193 149 RAPEN--RYP-CAYDDG---WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 222 (344)
Q Consensus 149 ~~p~~--~~~-~~~~D~---~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~ 222 (344)
..... ... ...+++ .++++.+.+. ..+ ++.++|+|+||.+++.++...++ .++++++++...+|.
T Consensus 109 ~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~------~~~-~v~lvG~s~GG~~a~~~aa~~~~--~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 109 SPDKVEGGMERNLADHVVALSEAIDTVKDV------TGR-DVHLVGYSQGGMFCYQAAAYRRS--KDIASIVTFGSPVDT 179 (994)
T ss_pred CCChhHcCccCCHHHHHHHHHHHHHHHHHh------hCC-ceEEEEEChhHHHHHHHHHhcCC--CccceEEEEeccccc
Confidence 43211 111 222333 3333333333 224 89999999999999988765332 258888876665543
No 117
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.92 E-value=2.7e-09 Score=86.72 Aligned_cols=209 Identities=14% Similarity=0.109 Sum_probs=124.4
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCC-----CCCCCCCch--hhHHHHHHHHHHhcccccCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR-----APENRYPCA--YDDGWTVLKWAKSRSWLQSKD 179 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~-----~p~~~~~~~--~~D~~~a~~~l~~~~~~~~~d 179 (344)
..|+.+-| ..|+...+ |......+-....++||+.|=+. .|+..|+.+ .+|+..+++-+... +
T Consensus 43 ~~iLlipG---alGs~~tD-f~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL------k 112 (277)
T KOG2984|consen 43 NYILLIPG---ALGSYKTD-FPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL------K 112 (277)
T ss_pred ceeEeccc---cccccccc-CCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh------C
Confidence 45788888 45565554 55556666666679999999663 366666654 48888888887665 4
Q ss_pred CCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCCh-hhhh--------h-CCC---CccCHHhHHHH
Q 019193 180 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTE-SEKR--------L-DGK---YFVTVQDRDWY 246 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~-~~~~--------~-~~~---~~~~~~~~~~~ 246 (344)
.. ++.|+|+|-||..|+.+|.+.++ .+..+|.+..-.-...... ..+. . ... .....+.+...
T Consensus 113 ~~-~fsvlGWSdGgiTalivAak~~e---~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~ 188 (277)
T KOG2984|consen 113 LE-PFSVLGWSDGGITALIVAAKGKE---KVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQ 188 (277)
T ss_pred CC-CeeEeeecCCCeEEEEeeccChh---hhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHH
Confidence 46 99999999999999999988766 4555555443221111100 0000 0 000 11122233333
Q ss_pred HHHhCCCC----CCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHH-HHHHHHHHHCCCCEEEEEeCCCceEEE
Q 019193 247 WRAYLPEG----ANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ-LAYMEGLKKAGQDVKLLYLEQATIGFY 321 (344)
Q Consensus 247 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~-~~~~~~L~~~g~~~~~~~~~g~~H~f~ 321 (344)
|..+.... ...+...+.... ..+ ..|+||+||+.|+++.+. ..|...++ .-.++.+++.+.|.|+
T Consensus 189 wa~wvD~v~qf~~~~dG~fCr~~l---p~v----kcPtli~hG~kDp~~~~~hv~fi~~~~---~~a~~~~~peGkHn~h 258 (277)
T KOG2984|consen 189 WAAWVDVVDQFHSFCDGRFCRLVL---PQV----KCPTLIMHGGKDPFCGDPHVCFIPVLK---SLAKVEIHPEGKHNFH 258 (277)
T ss_pred HHHHHHHHHHHhhcCCCchHhhhc---ccc----cCCeeEeeCCcCCCCCCCCccchhhhc---ccceEEEccCCCccee
Confidence 33322110 001111122111 122 238999999999997643 33444433 3468899999999998
Q ss_pred ECCCchHHHHHHHHHHHHHhcc
Q 019193 322 FLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 322 ~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
+. -+++....+.+||+++
T Consensus 259 Lr----ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 259 LR----YAKEFNKLVLDFLKST 276 (277)
T ss_pred ee----chHHHHHHHHHHHhcc
Confidence 64 3667778888998864
No 118
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.91 E-value=2.1e-08 Score=93.59 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=71.5
Q ss_pred CcccEEEEEcCCcccccCCCc-hhhHHHHHHHHhh-CCcEEEeeccCCCCCCCCCch-------hhHHHHHHHHHHhccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANS-AIYDILCRRLVGT-CKAVVVSVNYRRAPENRYPCA-------YDDGWTVLKWAKSRSW 174 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~-~~~~~~~~~la~~-~g~~vv~~dyr~~p~~~~~~~-------~~D~~~a~~~l~~~~~ 174 (344)
.. |++|++||.+- +... .+...++..+..+ .++.|+++|++......++.. -+++.+.++++.+..
T Consensus 40 ~~-ptvIlIHG~~~---s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~- 114 (442)
T TIGR03230 40 ET-KTFIVIHGWTV---TGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEF- 114 (442)
T ss_pred CC-CeEEEECCCCc---CCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhh-
Confidence 45 99999999432 2211 1122345555432 269999999996555545432 245666777776543
Q ss_pred ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 175 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 175 ~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
+++.+ ++.|+|||+||++|..++.+.+. ++.+++++.|.
T Consensus 115 --gl~l~-~VhLIGHSLGAhIAg~ag~~~p~---rV~rItgLDPA 153 (442)
T TIGR03230 115 --NYPWD-NVHLLGYSLGAHVAGIAGSLTKH---KVNRITGLDPA 153 (442)
T ss_pred --CCCCC-cEEEEEECHHHHHHHHHHHhCCc---ceeEEEEEcCC
Confidence 25677 99999999999999998877654 68899998885
No 119
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.88 E-value=4.3e-08 Score=84.97 Aligned_cols=185 Identities=17% Similarity=0.184 Sum_probs=121.3
Q ss_pred CCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC---------CC--C-CC--------------
Q 019193 102 SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA---------PE--N-RY-------------- 155 (344)
Q Consensus 102 ~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~---------p~--~-~~-------------- 155 (344)
.+++ |+|||-||=| |+... |..+|-.||.+ |++|.++++|-. +. . ++
T Consensus 115 ~~k~-PvvvFSHGLg---gsRt~--YSa~c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~e 187 (399)
T KOG3847|consen 115 NDKY-PVVVFSHGLG---GSRTL--YSAYCTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANE 187 (399)
T ss_pred CCCc-cEEEEecccc---cchhh--HHHHhhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCc
Confidence 6788 9999999933 24433 89999999998 999999999821 11 0 00
Q ss_pred ----------CchhhHHHHHHHHHHhcc----------------c--ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccC
Q 019193 156 ----------PCAYDDGWTVLKWAKSRS----------------W--LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE 207 (344)
Q Consensus 156 ----------~~~~~D~~~a~~~l~~~~----------------~--~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~ 207 (344)
-...++|..|++-+.+-. . +-++|.+ +++|+|||.||..+........
T Consensus 188 kef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s-~~aViGHSFGgAT~i~~ss~~t--- 263 (399)
T KOG3847|consen 188 KEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTS-QAAVIGHSFGGATSIASSSSHT--- 263 (399)
T ss_pred eeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhh-hhhheeccccchhhhhhhcccc---
Confidence 012367778887776310 0 0127888 9999999999988776655432
Q ss_pred CeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCC
Q 019193 208 VEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGL 287 (344)
Q Consensus 208 ~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~ 287 (344)
.+++.|++..|.-.-...- + .... . |++++. ..
T Consensus 264 -~FrcaI~lD~WM~Pl~~~~---------------------------------~--------~~ar---q-P~~fin-v~ 296 (399)
T KOG3847|consen 264 -DFRCAIALDAWMFPLDQLQ---------------------------------Y--------SQAR---Q-PTLFIN-VE 296 (399)
T ss_pred -ceeeeeeeeeeecccchhh---------------------------------h--------hhcc---C-CeEEEE-cc
Confidence 5889999888763211000 0 0111 2 677766 45
Q ss_pred CcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEE-CC----C--------------chHHHHHHHHHHHHHhccC
Q 019193 288 DLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYF-LP----N--------------NGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 288 D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~-~~----~--------------~~~~~~~~~~~~~fl~~~l 344 (344)
|--..++....++....+..-.+..+.|.-|.-.. +| + .+.-+-..+..++||++|+
T Consensus 297 ~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~ 372 (399)
T KOG3847|consen 297 DFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHL 372 (399)
T ss_pred cccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhh
Confidence 55566777777888777766788999999997321 11 1 1234557778889998875
No 120
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.88 E-value=2.6e-08 Score=92.16 Aligned_cols=184 Identities=18% Similarity=0.170 Sum_probs=97.8
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC--C------C-----C-------------CCC
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA--P------E-----N-------------RYP 156 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~--p------~-----~-------------~~~ 156 (344)
.+. |+|||-||-| |+... |..+|..||.+ ||+|+++|+|-. + + . ++.
T Consensus 98 ~~~-PvvIFSHGlg---g~R~~--yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T PF03403_consen 98 GKF-PVVIFSHGLG---GSRTS--YSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLR 170 (379)
T ss_dssp S-E-EEEEEE--TT-----TTT--THHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE--
T ss_pred CCC-CEEEEeCCCC---cchhh--HHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccc
Confidence 568 9999999944 34443 89999999998 999999999831 1 0 0 010
Q ss_pred ----------------chhhHHHHHHHHHHhc--c-------------ccc-C-CCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 157 ----------------CAYDDGWTVLKWAKSR--S-------------WLQ-S-KDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 157 ----------------~~~~D~~~a~~~l~~~--~-------------~~~-~-~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
....||..+++.+.+. + ..+ + +|.+ +|+++|||.||..|+.++...
T Consensus 171 ~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~-~i~~~GHSFGGATa~~~l~~d 249 (379)
T PF03403_consen 171 DFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLS-RIGLAGHSFGGATALQALRQD 249 (379)
T ss_dssp ---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEE-EEEEEEETHHHHHHHHHHHH-
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchh-heeeeecCchHHHHHHHHhhc
Confidence 0125677777777631 0 011 2 7888 999999999999999877664
Q ss_pred cccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEE
Q 019193 204 VESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVV 283 (344)
Q Consensus 204 ~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~ 283 (344)
.++++.|++.||.-.... ... ..+ ..|+|++
T Consensus 250 ----~r~~~~I~LD~W~~Pl~~----------------------------------~~~-------~~i----~~P~L~I 280 (379)
T PF03403_consen 250 ----TRFKAGILLDPWMFPLGD----------------------------------EIY-------SKI----PQPLLFI 280 (379)
T ss_dssp ----TT--EEEEES---TTS-G----------------------------------GGG-------GG------S-EEEE
T ss_pred ----cCcceEEEeCCcccCCCc----------------------------------ccc-------cCC----CCCEEEE
Confidence 268999999998632110 000 011 1278888
Q ss_pred EcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEE-----CCC------------ch--HHHHHHHHHHHHHhccC
Q 019193 284 VAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYF-----LPN------------NG--HFYTVMDEISNFVSCNY 344 (344)
Q Consensus 284 ~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~-----~~~------------~~--~~~~~~~~~~~fl~~~l 344 (344)
..+. -.........+++...+....+..+.|..|.-.. .|. .+ ..+...+.+++||++||
T Consensus 281 nSe~-f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L 359 (379)
T PF03403_consen 281 NSES-FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHL 359 (379)
T ss_dssp EETT-T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred ECcc-cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhc
Confidence 7653 3233222222334445567788999999997321 120 01 13445667788888774
No 121
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.87 E-value=5e-08 Score=92.05 Aligned_cols=198 Identities=18% Similarity=0.171 Sum_probs=124.2
Q ss_pred CCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC-----------chhhHHHHHHHHHH
Q 019193 102 SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-----------CAYDDGWTVLKWAK 170 (344)
Q Consensus 102 ~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~-----------~~~~D~~~a~~~l~ 170 (344)
+.+. |.++|.|||--+.-... |..--..|.+ .|.+....|-|...|.... ..++|..++.+|+.
T Consensus 467 dg~~-P~LLygYGay~isl~p~---f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLv 541 (712)
T KOG2237|consen 467 DGSK-PLLLYGYGAYGISLDPS---FRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLV 541 (712)
T ss_pred cCCC-ceEEEEecccceeeccc---cccceeEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHH
Confidence 3467 99999999754432222 3332233445 4999999999988775432 34689999999999
Q ss_pred hcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHh
Q 019193 171 SRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAY 250 (344)
Q Consensus 171 ~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
+++. ..++ +.++.|.|+||-|+.++.-+.++ .+.++|+--|++|.-... ..++++....+ +-+.-
T Consensus 542 e~gy---t~~~-kL~i~G~SaGGlLvga~iN~rPd---LF~avia~VpfmDvL~t~-------~~tilplt~sd-~ee~g 606 (712)
T KOG2237|consen 542 ENGY---TQPS-KLAIEGGSAGGLLVGACINQRPD---LFGAVIAKVPFMDVLNTH-------KDTILPLTTSD-YEEWG 606 (712)
T ss_pred HcCC---CCcc-ceeEecccCccchhHHHhccCch---HhhhhhhcCcceehhhhh-------ccCccccchhh-hcccC
Confidence 9976 7889 99999999999999988887776 688888888998753311 11111111000 00000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcCh--HHHHHHHHHHHHC-------CCCEEEEEeCCCceEE
Q 019193 251 LPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQ--DWQLAYMEGLKKA-------GQDVKLLYLEQATIGF 320 (344)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~--~~~~~~~~~L~~~-------g~~~~~~~~~g~~H~f 320 (344)
-+. .-.+.-.++++.+...-......|-++|.++.+|.-+ -++..+..+|+.. ..++-+.+..+++|+.
T Consensus 607 ~p~-~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~ 684 (712)
T KOG2237|consen 607 NPE-DFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGA 684 (712)
T ss_pred Chh-hhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCcccc
Confidence 000 0011112233332211111112788999999998543 3466777777643 2468899999999965
No 122
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.82 E-value=1.1e-07 Score=88.39 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=48.7
Q ss_pred CCcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEEEeCC-CceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 277 FPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQ-ATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 277 ~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~~~~g-~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
..|+++++|+.|.+++ .++.+++.+...+.+++++++++ .+|.... ++.+++.+.+.+||++.
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l----e~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV----FDIHLFEKKIYEFLNRK 388 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh----cCHHHHHHHHHHHHccc
Confidence 3489999999998865 34667777776667899999985 8996543 45778888999999753
No 123
>COG0627 Predicted esterase [General function prediction only]
Probab=98.82 E-value=2.3e-08 Score=89.55 Aligned_cols=146 Identities=15% Similarity=0.128 Sum_probs=91.5
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCC
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPAC 262 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (344)
+..|+|+||||+-|+.+|++.++ +++.+..++|+++........ ....... .......+.+...+......
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd---~f~~~sS~Sg~~~~s~~~~~~--~~~~~~~----g~~~~~~~~G~~~~~~w~~~ 223 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPD---RFKSASSFSGILSPSSPWGPT--LAMGDPW----GGKAFNAMLGPDSDPAWQEN 223 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcc---hhceecccccccccccccccc--ccccccc----cCccHHHhcCCCcccccccc
Confidence 79999999999999999999876 688889999988765322111 0000000 01111222222222111111
Q ss_pred CCCCCCCC----------CcCCCCCCcEEEEEcCCCcChH-H---HHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchH
Q 019193 263 NPFGPKGI----------DLVGVKFPKSLVVVAGLDLIQD-W---QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGH 328 (344)
Q Consensus 263 ~~~~~~~~----------~~~~~~~pP~li~~G~~D~l~~-~---~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~ 328 (344)
+++.-... .... ..+++++-+|..|.+.. . .+.+.+++++.|.+..+...++..|.|.+
T Consensus 224 D~~~~~~~l~~~~~~~~~~~~~-~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~------ 296 (316)
T COG0627 224 DPLSLIEKLVANANTRIWVYGG-SPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYF------ 296 (316)
T ss_pred CchhHHHHhhhcccccceeccc-CCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHH------
Confidence 11110000 0000 24678888999998765 3 58899999999999999999999998853
Q ss_pred HHHHHHHHHHHHhccC
Q 019193 329 FYTVMDEISNFVSCNY 344 (344)
Q Consensus 329 ~~~~~~~~~~fl~~~l 344 (344)
....+++...|+...|
T Consensus 297 w~~~l~~~~~~~a~~l 312 (316)
T COG0627 297 WASQLADHLPWLAGAL 312 (316)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4557788888887654
No 124
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.75 E-value=2.7e-08 Score=87.48 Aligned_cols=227 Identities=15% Similarity=0.069 Sum_probs=78.4
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCC----CCCCCCCchhhHHHHHHHHHHhcccccCCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR----APENRYPCAYDDGWTVLKWAKSRSWLQSKDSKA 182 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~----~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~ 182 (344)
.+||||-|=|= |-........++..| ...++.|+.+..+- ..-.......+|+.++++|++..... .-..+
T Consensus 34 ~~llfIGGLtD--Gl~tvpY~~~La~aL-~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g-~~~~~- 108 (303)
T PF08538_consen 34 NALLFIGGLTD--GLLTVPYLPDLAEAL-EETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGG-HFGRE- 108 (303)
T ss_dssp SEEEEE--TT----TT-STCHHHHHHHH-T-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------S-
T ss_pred cEEEEECCCCC--CCCCCchHHHHHHHh-ccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhcc-ccCCc-
Confidence 68999988321 111222134455555 44599999997664 23345556789999999999987320 02456
Q ss_pred eEEEeeCCchHHHHHHHHHHhcc--cCCeeeEEEEeccccCCCCCChhhhh-------------h----CCCCccCHH--
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVE--SEVEILGNILLNPMFGGQERTESEKR-------------L----DGKYFVTVQ-- 241 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~--~~~~i~~~il~~p~~~~~~~~~~~~~-------------~----~~~~~~~~~-- 241 (344)
+|+|||||-|..-++.+...... ...+|.|.|+-+|+-|-......... . ....+++..
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~ 188 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPREFT 188 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG----G
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeecccc
Confidence 99999999999999998887643 24689999999998764432211000 0 001111110
Q ss_pred ---------hHHHHHHHhCCCCCCCCCCCCCCCCCC--CCCcCCCCCCcEEEEEcCCCcChHHH---HHHHHHHHHCCC-
Q 019193 242 ---------DRDWYWRAYLPEGANRDHPACNPFGPK--GIDLVGVKFPKSLVVVAGLDLIQDWQ---LAYMEGLKKAGQ- 306 (344)
Q Consensus 242 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~pP~li~~G~~D~l~~~~---~~~~~~L~~~g~- 306 (344)
...+++..+.+.+.+ +...+-+... ...+..+ ..|+|++.++.|..+|.. +++.++.+++-.
T Consensus 189 ~~~~~~~PiTA~Rf~SL~s~~gdD--D~FSSDL~de~l~~tfG~v-~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~ 265 (303)
T PF08538_consen 189 PLVFYDTPITAYRFLSLASPGGDD--DYFSSDLSDERLKKTFGKV-SKPLLVLYSGKDEYVPPWVDKEALLERWKAATNP 265 (303)
T ss_dssp GTTT-SS---HHHHHT-S-SSHHH--HTHHHHHTT-HHHHTGGG---S-EEEEEE--TT---------------------
T ss_pred ccccCCCcccHHHHHhccCCCCcc--cccCCCCCHHHHHHHhccC-CCceEEEecCCCceeccccccccccccccccccc
Confidence 011111111111000 0000000000 0011111 238999999999887754 455566554322
Q ss_pred ---CEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 307 ---DVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 307 ---~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
....-++||+.|...........+...+.+.+||+
T Consensus 266 ~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 266 KIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccCC
Confidence 23356899999987543322224567778888874
No 125
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.74 E-value=2.1e-07 Score=81.00 Aligned_cols=196 Identities=16% Similarity=0.099 Sum_probs=115.5
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhh---CCcEEEeeccCCC
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGT---CKAVVVSVNYRRA 150 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~---~g~~vv~~dyr~~ 150 (344)
.....-+|.|.+. .+..++ |+++.+||=-|.....- ......+..+ ...++|.+||--.
T Consensus 80 ~~~~~vv~lppgy-------------~~~~k~-pvl~~~DG~~~~~~g~i----~~~~dsli~~g~i~pai~vgid~~d~ 141 (299)
T COG2382 80 SERRRVVYLPPGY-------------NPLEKY-PVLYLQDGQDWFRSGRI----PRILDSLIAAGEIPPAILVGIDYIDV 141 (299)
T ss_pred cceeEEEEeCCCC-------------Cccccc-cEEEEeccHHHHhcCCh----HHHHHHHHHcCCCCCceEEecCCCCH
Confidence 3466678888875 234688 99999999555432211 2233333332 2678999998632
Q ss_pred ----CCCCCC-chhhHH-HHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCC
Q 019193 151 ----PENRYP-CAYDDG-WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE 224 (344)
Q Consensus 151 ----p~~~~~-~~~~D~-~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~ 224 (344)
-+.+.. +....+ .+.+-++.+.-... -+++ +-+|+|.|+||..+++.++.+++ .+-.++..||.++...
T Consensus 142 ~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~-~~a~-~r~L~G~SlGG~vsL~agl~~Pe---~FG~V~s~Sps~~~~~ 216 (299)
T COG2382 142 KKRREELHCNEAYWRFLAQELLPYVEERYPTS-ADAD-GRVLAGDSLGGLVSLYAGLRHPE---RFGHVLSQSGSFWWTP 216 (299)
T ss_pred HHHHHHhcccHHHHHHHHHHhhhhhhccCccc-ccCC-CcEEeccccccHHHHHHHhcCch---hhceeeccCCccccCc
Confidence 112211 122222 23444444443222 4556 88999999999999999999887 5888889999886543
Q ss_pred CChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHC
Q 019193 225 RTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKA 304 (344)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~ 304 (344)
....... .. ....+.. .......--++...++.+.+....+++++.|++.
T Consensus 217 ~~~~~~~-----------------------~~--~~~l~~~-----~a~~~~~~~~l~~g~~~~~~~~pNr~L~~~L~~~ 266 (299)
T COG2382 217 LDTQPQG-----------------------EV--AESLKIL-----HAIGTDERIVLTTGGEEGDFLRPNRALAAQLEKK 266 (299)
T ss_pred ccccccc-----------------------ch--hhhhhhh-----hccCccceEEeecCCccccccchhHHHHHHHHhc
Confidence 2210000 00 0000000 0000001113333334456777789999999999
Q ss_pred CCCEEEEEeCCCceEEEEC
Q 019193 305 GQDVKLLYLEQATIGFYFL 323 (344)
Q Consensus 305 g~~~~~~~~~g~~H~f~~~ 323 (344)
|.+..+.+|+| +|.+..+
T Consensus 267 g~~~~yre~~G-gHdw~~W 284 (299)
T COG2382 267 GIPYYYREYPG-GHDWAWW 284 (299)
T ss_pred CCcceeeecCC-CCchhHh
Confidence 99999999999 9987543
No 126
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.66 E-value=2e-07 Score=76.25 Aligned_cols=185 Identities=16% Similarity=0.215 Sum_probs=111.0
Q ss_pred cEEEEEcC-CcccccCCCchhhHHHHHHHHhhCCcEEEeeccC-CCCCCCCCch-hhHHHHHHHHHHhcccccCCCCCCe
Q 019193 107 PVIIFFHG-GSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR-RAPENRYPCA-YDDGWTVLKWAKSRSWLQSKDSKAH 183 (344)
Q Consensus 107 p~vv~~HG-Gg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr-~~p~~~~~~~-~~D~~~a~~~l~~~~~~~~~d~~~~ 183 (344)
-.+|++-| |||.. . -..++..|+++ |+.|+.+|-. ..-...-|.+ ..|+.+++++..+. -..+ +
T Consensus 3 t~~v~~SGDgGw~~--~----d~~~a~~l~~~-G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~-----w~~~-~ 69 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD--L----DKQIAEALAKQ-GVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRAR-----WGRK-R 69 (192)
T ss_pred EEEEEEeCCCCchh--h----hHHHHHHHHHC-CCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHH-----hCCc-e
Confidence 45778888 78741 1 25778899988 9999999943 1222333433 47888888888776 2345 9
Q ss_pred EEEeeCCchHHHHHHHHHHhcc-cCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCC
Q 019193 184 IYLAGDSSGGNIVHHVALRAVE-SEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPAC 262 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~~~~-~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (344)
++|+|.|.|+-+.-.+..+++. ...+|+.+++++|-........ ... ++....... .
T Consensus 70 vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeih--------------v~~-----wlg~~~~~~---~ 127 (192)
T PF06057_consen 70 VVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIH--------------VSG-----WLGMGGDDA---A 127 (192)
T ss_pred EEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEE--------------hhh-----hcCCCCCcc---c
Confidence 9999999999888777766643 3358999999998643222110 000 011011000 0
Q ss_pred CCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 263 NPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 263 ~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
.+.. ..+..+...|++.+.|++|.- .....+++. .++.+..||..| |. .....+.+.|++-|++
T Consensus 128 ~~~~---pei~~l~~~~v~CiyG~~E~d-----~~cp~l~~~--~~~~i~lpGgHH-fd-----~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 128 YPVI---PEIAKLPPAPVQCIYGEDEDD-----SLCPSLRQP--GVEVIALPGGHH-FD-----GDYDALAKRILDALKA 191 (192)
T ss_pred CCch---HHHHhCCCCeEEEEEcCCCCC-----CcCccccCC--CcEEEEcCCCcC-CC-----CCHHHHHHHHHHHHhc
Confidence 0111 222332234899999987742 122234443 568899998655 42 2356666777766654
No 127
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.62 E-value=8.1e-07 Score=72.95 Aligned_cols=150 Identities=19% Similarity=0.205 Sum_probs=79.4
Q ss_pred EEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEee
Q 019193 109 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAG 188 (344)
Q Consensus 109 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G 188 (344)
|+.+||-+ |+....++.-+.+++... +.|-.++. .. | |+.+-+..+.+... .++ + +++|+|
T Consensus 1 v~IvhG~~---~s~~~HW~~wl~~~l~~~--~~V~~~~~----~~--P----~~~~W~~~l~~~i~--~~~-~-~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYG---GSPPDHWQPWLERQLENS--VRVEQPDW----DN--P----DLDEWVQALDQAID--AID-E-PTILVA 61 (171)
T ss_dssp EEEE--TT---SSTTTSTHHHHHHHHTTS--EEEEEC------TS--------HHHHHHHHHHCCH--C-T-T-TEEEEE
T ss_pred CEEeCCCC---CCCccHHHHHHHHhCCCC--eEEecccc----CC--C----CHHHHHHHHHHHHh--hcC-C-CeEEEE
Confidence 67899933 455555566666666543 55555444 11 1 23333333443322 133 4 699999
Q ss_pred CCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 019193 189 DSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPK 268 (344)
Q Consensus 189 ~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (344)
||.|...++.++.. ....+++|++|++|+-.... . . ..+....+.+
T Consensus 62 HSLGc~~~l~~l~~--~~~~~v~g~lLVAp~~~~~~-----~--~------------------------~~~~~~~f~~- 107 (171)
T PF06821_consen 62 HSLGCLTALRWLAE--QSQKKVAGALLVAPFDPDDP-----E--P------------------------FPPELDGFTP- 107 (171)
T ss_dssp ETHHHHHHHHHHHH--TCCSSEEEEEEES--SCGCH-----H--C------------------------CTCGGCCCTT-
T ss_pred eCHHHHHHHHHHhh--cccccccEEEEEcCCCcccc-----c--c------------------------hhhhcccccc-
Confidence 99999999998852 23348999999999843100 0 0 0000000000
Q ss_pred CCCcCCCCCCcEEEEEcCCCcChHH--HHHHHHHHHHCCCCEEEEEeCCCce
Q 019193 269 GIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATI 318 (344)
Q Consensus 269 ~~~~~~~~~pP~li~~G~~D~l~~~--~~~~~~~L~~~g~~~~~~~~~g~~H 318 (344)
.....+.+ |.+++.+++|+.++. ++.++++|. .+++.+++++|
T Consensus 108 -~p~~~l~~-~~~viaS~nDp~vp~~~a~~~A~~l~-----a~~~~~~~~GH 152 (171)
T PF06821_consen 108 -LPRDPLPF-PSIVIASDNDPYVPFERAQRLAQRLG-----AELIILGGGGH 152 (171)
T ss_dssp -SHCCHHHC-CEEEEEETTBSSS-HHHHHHHHHHHT------EEEEETS-TT
T ss_pred -CcccccCC-CeEEEEcCCCCccCHHHHHHHHHHcC-----CCeEECCCCCC
Confidence 00000012 578999999998764 455555553 58999999999
No 128
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.60 E-value=6.2e-06 Score=78.77 Aligned_cols=130 Identities=11% Similarity=0.130 Sum_probs=83.6
Q ss_pred EEEEEeCCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcC---CcccccCCCchhhHHHHHHHHhhCCcEE
Q 019193 66 FDVIVDRGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHG---GSFAHSSANSAIYDILCRRLVGTCKAVV 142 (344)
Q Consensus 66 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HG---Gg~~~g~~~~~~~~~~~~~la~~~g~~v 142 (344)
.++.+. .+-+.+.-|.|.... ..+. | ||+++. ..|+. +... ...+++.+.++ |+.|
T Consensus 192 g~VV~~-n~l~eLiqY~P~te~--------------v~~~-P-LLIVPp~INK~YIl-DL~P--~~SlVr~lv~q-G~~V 250 (560)
T TIGR01839 192 GAVVFR-NEVLELIQYKPITEQ--------------QHAR-P-LLVVPPQINKFYIF-DLSP--EKSFVQYCLKN-QLQV 250 (560)
T ss_pred CceeEE-CCceEEEEeCCCCCC--------------cCCC-c-EEEechhhhhhhee-ecCC--cchHHHHHHHc-CCeE
Confidence 344442 244777778886542 1233 5 556665 22332 2222 36788999988 9999
Q ss_pred EeeccCCCCCC----CCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHH----HHHhcccCCeeeEEE
Q 019193 143 VSVNYRRAPEN----RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHV----ALRAVESEVEILGNI 214 (344)
Q Consensus 143 v~~dyr~~p~~----~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~----a~~~~~~~~~i~~~i 214 (344)
+.+|++..... .+.+-++.+.++++.+.+.. ... +|.++|+|+||.+++++ +.+.++ .+|+.++
T Consensus 251 flIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~t-----G~~-~vnl~GyC~GGtl~a~~~a~~aA~~~~--~~V~slt 322 (560)
T TIGR01839 251 FIISWRNPDKAHREWGLSTYVDALKEAVDAVRAIT-----GSR-DLNLLGACAGGLTCAALVGHLQALGQL--RKVNSLT 322 (560)
T ss_pred EEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhc-----CCC-CeeEEEECcchHHHHHHHHHHHhcCCC--CceeeEE
Confidence 99999974222 22344566777788877762 335 89999999999999963 332221 2699999
Q ss_pred EeccccCCCC
Q 019193 215 LLNPMFGGQE 224 (344)
Q Consensus 215 l~~p~~~~~~ 224 (344)
++...+|...
T Consensus 323 llatplDf~~ 332 (560)
T TIGR01839 323 YLVSLLDSTM 332 (560)
T ss_pred eeecccccCC
Confidence 8887777653
No 129
>PRK04940 hypothetical protein; Provisional
Probab=98.57 E-value=3e-06 Score=69.20 Aligned_cols=118 Identities=18% Similarity=0.171 Sum_probs=70.0
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCC
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPAC 262 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (344)
++.|+|.|+||..|..++.+.. + ..|++.|.+....... ...+.+..-..........+
T Consensus 61 ~~~liGSSLGGyyA~~La~~~g-----~-~aVLiNPAv~P~~~L~---~~ig~~~~y~~~~~~h~~eL------------ 119 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGFLCG-----I-RQVIFNPNLFPEENME---GKIDRPEEYADIATKCVTNF------------ 119 (180)
T ss_pred CcEEEEeChHHHHHHHHHHHHC-----C-CEEEECCCCChHHHHH---HHhCCCcchhhhhHHHHHHh------------
Confidence 7999999999999999999863 3 3567888775422111 00000000000000000000
Q ss_pred CCCCCCCCCcCCCCCC-cEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 263 NPFGPKGIDLVGVKFP-KSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 263 ~~~~~~~~~~~~~~~p-P~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
+ ..-| ..+++..+.|.+.|.-+ ..+++... .+..+.+|++|.|. ..++.+..|.+|+.
T Consensus 120 ----------~-~~~p~r~~vllq~gDEvLDyr~-a~~~y~~~---y~~~v~~GGdH~f~------~fe~~l~~I~~F~~ 178 (180)
T PRK04940 120 ----------R-EKNRDRCLVILSRNDEVLDSQR-TAEELHPY---YEIVWDEEQTHKFK------NISPHLQRIKAFKT 178 (180)
T ss_pred ----------h-hcCcccEEEEEeCCCcccCHHH-HHHHhccC---ceEEEECCCCCCCC------CHHHHHHHHHHHHh
Confidence 0 0112 47899999999987543 33444322 25889999999985 35568889999985
Q ss_pred c
Q 019193 342 C 342 (344)
Q Consensus 342 ~ 342 (344)
.
T Consensus 179 ~ 179 (180)
T PRK04940 179 L 179 (180)
T ss_pred c
Confidence 3
No 130
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.53 E-value=4.6e-07 Score=78.21 Aligned_cols=101 Identities=22% Similarity=0.192 Sum_probs=71.2
Q ss_pred EEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCC-CCCCCchhhHHH-HHHHHHHhcccccCCCCCCeEE
Q 019193 108 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP-ENRYPCAYDDGW-TVLKWAKSRSWLQSKDSKAHIY 185 (344)
Q Consensus 108 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p-~~~~~~~~~D~~-~a~~~l~~~~~~~~~d~~~~i~ 185 (344)
.|+++|+||. +.. .|..+++.+..+ .+.|+.++++... ..+.+..++++. ..++.+... ...+ ++.
T Consensus 2 ~lf~~p~~gG---~~~--~y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~-----~~~g-p~~ 69 (229)
T PF00975_consen 2 PLFCFPPAGG---SAS--SYRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRAR-----QPEG-PYV 69 (229)
T ss_dssp EEEEESSTTC---SGG--GGHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHH-----TSSS-SEE
T ss_pred eEEEEcCCcc---CHH--HHHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhh-----CCCC-Cee
Confidence 5789999762 333 389999999876 6889999887652 233334444443 233344333 2334 899
Q ss_pred EeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 186 LAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 186 l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
|+|+|+||.+|..+|.++.+.+..+..++++....
T Consensus 70 L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 70 LAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp EEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred ehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999999999999999988788899999998543
No 131
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.45 E-value=3.2e-07 Score=83.23 Aligned_cols=111 Identities=20% Similarity=0.241 Sum_probs=64.6
Q ss_pred CCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhh--CCcEEEeeccCCCCCCCCCchhh-------HHHHHHHHHHhc
Q 019193 102 SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGT--CKAVVVSVNYRRAPENRYPCAYD-------DGWTVLKWAKSR 172 (344)
Q Consensus 102 ~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~--~g~~vv~~dyr~~p~~~~~~~~~-------D~~~a~~~l~~~ 172 (344)
...+ |++|++|| |........+...+...+.++ .++.|+++|+...-...|..+.. .+...+.+|.+.
T Consensus 68 n~~~-pt~iiiHG--w~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 68 NPSK-PTVIIIHG--WTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp -TTS-EEEEEE----TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-CeEEEEcC--cCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhh
Confidence 3456 99999999 443221334456666666655 58999999998543334444432 333344444433
Q ss_pred ccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 173 SWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 173 ~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
.+++++ +|.|+|||.|||+|..++..... +.+|..+..+.|.-
T Consensus 145 ---~g~~~~-~ihlIGhSLGAHvaG~aG~~~~~-~~ki~rItgLDPAg 187 (331)
T PF00151_consen 145 ---FGVPPE-NIHLIGHSLGAHVAGFAGKYLKG-GGKIGRITGLDPAG 187 (331)
T ss_dssp ---H---GG-GEEEEEETCHHHHHHHHHHHTTT----SSEEEEES-B-
T ss_pred ---cCCChh-HEEEEeeccchhhhhhhhhhccC-cceeeEEEecCccc
Confidence 347889 99999999999999999888765 45677777777653
No 132
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.45 E-value=4.2e-06 Score=73.94 Aligned_cols=117 Identities=20% Similarity=0.230 Sum_probs=80.4
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhh--CCcEEEeeccCCC---CCC-------CCCchhhHHHHHHHHHHhccc
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGT--CKAVVVSVNYRRA---PEN-------RYPCAYDDGWTVLKWAKSRSW 174 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~--~g~~vv~~dyr~~---p~~-------~~~~~~~D~~~a~~~l~~~~~ 174 (344)
++|++|.|-.. -.+.|..++..|.+. ..+.|+.+.+..- +.. ..-.--+++...++.+.+...
T Consensus 3 ~li~~IPGNPG-----lv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 3 PLIVFIPGNPG-----LVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred EEEEEECCCCC-----hHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 78999999332 234588999999876 3799999988742 222 222333555555666555432
Q ss_pred ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhh
Q 019193 175 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESE 229 (344)
Q Consensus 175 ~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~ 229 (344)
....... +++|+|||.|+++++.+..+..+...+|.+++++.|.+..-..+++.
T Consensus 78 ~~~~~~~-~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G 131 (266)
T PF10230_consen 78 QKNKPNV-KLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNG 131 (266)
T ss_pred hhcCCCC-cEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchh
Confidence 1111234 89999999999999999998874456899999999987655555544
No 133
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.42 E-value=1.2e-06 Score=74.84 Aligned_cols=114 Identities=10% Similarity=0.014 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcc-----cCCeeeEEEEeccccCCCCCChhhhhhC
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-----SEVEILGNILLNPMFGGQERTESEKRLD 233 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~-----~~~~i~~~il~~p~~~~~~~~~~~~~~~ 233 (344)
..++.++++++.+...+.+ . =..|+|+|.||.+|+.++..... ....++.+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~G---P-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG---P-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred ccCHHHHHHHHHHHHHhcC---C-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 4566777777776533221 1 26799999999999988865422 23568999999987532110
Q ss_pred CCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChH--HHHHHHHHHHHCCCCEEEE
Q 019193 234 GKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLL 311 (344)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~--~~~~~~~~L~~~g~~~~~~ 311 (344)
+ ..... ...+ .-|++-++|+.|.+++ .++.+++..... .++.
T Consensus 151 ----------------~--------~~~~~-----~~~i----~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~ 194 (212)
T PF03959_consen 151 ----------------Y--------QELYD-----EPKI----SIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVI 194 (212)
T ss_dssp ----------------G--------TTTT-------TT-------EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEE
T ss_pred ----------------h--------hhhhc-----cccC----CCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEE
Confidence 0 00000 0111 2289999999999988 667777777654 6777
Q ss_pred EeCCCceEEE
Q 019193 312 YLEQATIGFY 321 (344)
Q Consensus 312 ~~~g~~H~f~ 321 (344)
.++| +|.+.
T Consensus 195 ~h~g-GH~vP 203 (212)
T PF03959_consen 195 EHDG-GHHVP 203 (212)
T ss_dssp EESS-SSS--
T ss_pred EECC-CCcCc
Confidence 7786 77553
No 134
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.40 E-value=2.3e-06 Score=76.81 Aligned_cols=120 Identities=18% Similarity=0.168 Sum_probs=84.4
Q ss_pred EEEEEEeCC---CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcE
Q 019193 65 SFDVIVDRG---TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV 141 (344)
Q Consensus 65 ~~~~~~~~~---~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~ 141 (344)
...++++.. ..+.+.+|.|...... ....+. |+|++-||-| +... .|...+..+++. |++
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~----------~~~~~~-PlvvlshG~G----s~~~-~f~~~A~~lAs~-Gf~ 100 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGT----------VALYLL-PLVVLSHGSG----SYVT-GFAWLAEHLASY-GFV 100 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccc----------cccCcC-CeEEecCCCC----CCcc-chhhhHHHHhhC-ceE
Confidence 455666542 3488899999876200 112367 9999999944 2222 267778888987 999
Q ss_pred EEeeccCCCCC-----CC-----CC-----chhhHHHHHHHHHHhc---cccc-CCCCCCeEEEeeCCchHHHHHHHHHH
Q 019193 142 VVSVNYRRAPE-----NR-----YP-----CAYDDGWTVLKWAKSR---SWLQ-SKDSKAHIYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 142 vv~~dyr~~p~-----~~-----~~-----~~~~D~~~a~~~l~~~---~~~~-~~d~~~~i~l~G~SaGG~lA~~~a~~ 202 (344)
|..+++..+.. +. +. +...|+...++++.+. +..- .+|+. +|.+.|||.||+.++.++..
T Consensus 101 Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~-~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 101 VAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQ-RVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred EEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCcc-ceEEEecccccHHHHHhccc
Confidence 99999874311 11 11 4457999999999887 4222 39999 99999999999999988654
No 135
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.40 E-value=4.5e-05 Score=65.60 Aligned_cols=100 Identities=18% Similarity=0.246 Sum_probs=60.7
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhC-CcEEEeeccCCCCCCC-CCchhhHHHHHHHHHHhcccccCCCCCCeE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTC-KAVVVSVNYRRAPENR-YPCAYDDGWTVLKWAKSRSWLQSKDSKAHI 184 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~-g~~vv~~dyr~~p~~~-~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i 184 (344)
|.|+++||++.. ... +......+.... .+.++.+|.|...... ...........+..+.+. .... ++
T Consensus 22 ~~i~~~hg~~~~---~~~--~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~-----~~~~-~~ 90 (282)
T COG0596 22 PPLVLLHGFPGS---SSV--WRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDA-----LGLE-KV 90 (282)
T ss_pred CeEEEeCCCCCc---hhh--hHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHH-----hCCC-ce
Confidence 789999996632 111 222222233221 2899999999544433 011111112223333332 2334 79
Q ss_pred EEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 185 YLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
.++|||+||.+++.++.+.++ .+.+++++++..
T Consensus 91 ~l~G~S~Gg~~~~~~~~~~p~---~~~~~v~~~~~~ 123 (282)
T COG0596 91 VLVGHSMGGAVALALALRHPD---RVRGLVLIGPAP 123 (282)
T ss_pred EEEEecccHHHHHHHHHhcch---hhheeeEecCCC
Confidence 999999999999999998876 688888888654
No 136
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.37 E-value=2.5e-06 Score=84.85 Aligned_cols=92 Identities=14% Similarity=0.086 Sum_probs=62.9
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCC----------------------------
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY---------------------------- 155 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~---------------------------- 155 (344)
.+ |+||++||-+ ++.. .|..++..|+++ ||.|+++|||...+..+
T Consensus 448 g~-P~VVllHG~~---g~~~--~~~~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRD 520 (792)
T TIGR03502 448 GW-PVVIYQHGIT---GAKE--NALAFAGTLAAA-GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARD 520 (792)
T ss_pred CC-cEEEEeCCCC---CCHH--HHHHHHHHHHhC-CcEEEEeCCCCCCccccccccccccccccCccceecccccccccc
Confidence 46 8999999933 2332 378889999887 99999999985433311
Q ss_pred --CchhhHHHHHHHHHH------hccccc-CCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 156 --PCAYDDGWTVLKWAK------SRSWLQ-SKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 156 --~~~~~D~~~a~~~l~------~~~~~~-~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
.+.+.|+......+. ...... ..+.. +++++||||||.++..++...
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~-~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS-KVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCC-cEEEEecCHHHHHHHHHHHhc
Confidence 223356666666555 111111 14566 999999999999999988753
No 137
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.33 E-value=5.8e-05 Score=67.74 Aligned_cols=101 Identities=16% Similarity=0.163 Sum_probs=67.6
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCC----CCCCC-------C-------CchhhHHHH
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR----APENR-------Y-------PCAYDDGWT 164 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~----~p~~~-------~-------~~~~~D~~~ 164 (344)
+.+ |++|.+.|.|-.. .......+++.|.++ |+..+.+.-+. -|... . -+.+.++..
T Consensus 90 ~~r-p~~IhLagTGDh~---f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~ 164 (348)
T PF09752_consen 90 PYR-PVCIHLAGTGDHG---FWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRA 164 (348)
T ss_pred CCC-ceEEEecCCCccc---hhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHH
Confidence 356 9999999965211 111123348888988 99988886331 12211 1 234588999
Q ss_pred HHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 165 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 165 a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
.+.|+.+++. . +++|.|.||||++|.+.+...+. ++..+-++++
T Consensus 165 Ll~Wl~~~G~------~-~~g~~G~SmGG~~A~laa~~~p~---pv~~vp~ls~ 208 (348)
T PF09752_consen 165 LLHWLEREGY------G-PLGLTGISMGGHMAALAASNWPR---PVALVPCLSW 208 (348)
T ss_pred HHHHHHhcCC------C-ceEEEEechhHhhHHhhhhcCCC---ceeEEEeecc
Confidence 9999998843 4 89999999999999998887654 3444444443
No 138
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.33 E-value=0.00017 Score=62.36 Aligned_cols=120 Identities=14% Similarity=0.043 Sum_probs=73.9
Q ss_pred ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCC
Q 019193 175 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEG 254 (344)
Q Consensus 175 ~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
.+.++.+ +..|+|||.||.+++...+..++ .+...+++||.+......- . ...+
T Consensus 131 ~y~~~~~-~~~i~GhSlGGLfvl~aLL~~p~---~F~~y~~~SPSlWw~n~~~-------------------l-~~~~-- 184 (264)
T COG2819 131 RYRTNSE-RTAIIGHSLGGLFVLFALLTYPD---CFGRYGLISPSLWWHNEAI-------------------L-REIE-- 184 (264)
T ss_pred ccccCcc-cceeeeecchhHHHHHHHhcCcc---hhceeeeecchhhhCCHHH-------------------h-cccc--
Confidence 3458889 99999999999999998887765 5888999999775433110 0 0000
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCc---C-----hHHHHHHHHHHHH-CCCCEEEEEeCCCceEEEECCC
Q 019193 255 ANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDL---I-----QDWQLAYMEGLKK-AGQDVKLLYLEQATIGFYFLPN 325 (344)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~---l-----~~~~~~~~~~L~~-~g~~~~~~~~~g~~H~f~~~~~ 325 (344)
..... + .. -.-+++-.|+.|. . ..+.....+.++. .|..+.+..+++..|+-.
T Consensus 185 ---~~~~~-~--------~~--~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~~---- 246 (264)
T COG2819 185 ---SLKLL-K--------TK--RICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGARLVFQEEPLEHHGSV---- 246 (264)
T ss_pred ---ccccC-C--------Cc--ceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCCceEecccccccccch----
Confidence 00000 0 00 1135555565553 2 2233444455556 889999999999999642
Q ss_pred chHHHHHHHHHHHHHh
Q 019193 326 NGHFYTVMDEISNFVS 341 (344)
Q Consensus 326 ~~~~~~~~~~~~~fl~ 341 (344)
....+..+++|+.
T Consensus 247 ---~~~~~~~al~~l~ 259 (264)
T COG2819 247 ---IHASLPSALRFLD 259 (264)
T ss_pred ---HHHHHHHHHHhhh
Confidence 3345566666664
No 139
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.30 E-value=9.4e-05 Score=68.50 Aligned_cols=108 Identities=19% Similarity=0.206 Sum_probs=79.5
Q ss_pred CCcccEEEEEcC-----CcccccCCCchhhHHHHHHHHhhCCcEEEeeccCC----------CCC-CC-C-----Cc-hh
Q 019193 103 EVVVPVIIFFHG-----GSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR----------APE-NR-Y-----PC-AY 159 (344)
Q Consensus 103 ~~~~p~vv~~HG-----Gg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~----------~p~-~~-~-----~~-~~ 159 (344)
.++ |+|++.|| ..|+....+ ..++-.|+++ ||-|..-+-|. .|. .. | .. +.
T Consensus 71 ~~r-p~Vll~HGLl~sS~~Wv~n~p~----~sLaf~Lada-GYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~ 144 (403)
T KOG2624|consen 71 KKR-PVVLLQHGLLASSSSWVLNGPE----QSLAFLLADA-GYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGT 144 (403)
T ss_pred CCC-CcEEEeeccccccccceecCcc----ccHHHHHHHc-CCceeeecCcCcccchhhcccCCcCCcceeecchhhhhh
Confidence 367 99999999 456543322 3455567776 99999999883 232 11 1 12 45
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCC
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 222 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~ 222 (344)
.|+-+.++++.+.- ..+ ++..+|||.|.......+...++...+|+..++++|....
T Consensus 145 yDLPA~IdyIL~~T-----~~~-kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 145 YDLPAMIDYILEKT-----GQE-KLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred cCHHHHHHHHHHhc-----ccc-ceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 89999999999873 345 9999999999999988777765555679999999998743
No 140
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.23 E-value=1.2e-05 Score=69.28 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=63.7
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHh-------hCCcEEEeeccCCCCCC----CCCchhhHHHHHHHHHHhcccc
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVG-------TCKAVVVSVNYRRAPEN----RYPCAYDDGWTVLKWAKSRSWL 175 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~-------~~g~~vv~~dyr~~p~~----~~~~~~~D~~~a~~~l~~~~~~ 175 (344)
..|||+||-+ |+... .+.+...+.+ ...+.++.+||.-.... ....+.+-+..+++.+.+....
T Consensus 5 ~pVlFIhG~~---Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 5 IPVLFIHGNA---GSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CEEEEECcCC---CCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhh
Confidence 5689999933 33221 2333333311 12577888998743222 2223345556667776665321
Q ss_pred cCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 176 QSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 176 ~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
....+. +|+|+||||||-+|..+..........++.+|.++.
T Consensus 80 ~~~~~~-~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t 121 (225)
T PF07819_consen 80 NRPPPR-SVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT 121 (225)
T ss_pred ccCCCC-ceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence 124566 999999999999888776654433347888887653
No 141
>COG3150 Predicted esterase [General function prediction only]
Probab=98.23 E-value=2e-05 Score=62.54 Aligned_cols=54 Identities=17% Similarity=0.194 Sum_probs=34.0
Q ss_pred CCcEEEEE-cCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 277 FPKSLVVV-AGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 277 ~pP~li~~-G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
.|..|.+- -+.|.+.|..+ .++.+. ++...+++|.+|.|.- ....++.|..|..
T Consensus 133 ~p~~~~lL~qtgDEvLDyr~-a~a~y~----~~~~~V~dgg~H~F~~------f~~~l~~i~aF~g 187 (191)
T COG3150 133 RPRCLVLLSQTGDEVLDYRQ-AVAYYH----PCYEIVWDGGDHKFKG------FSRHLQRIKAFKG 187 (191)
T ss_pred CCcEEEeecccccHHHHHHH-HHHHhh----hhhheeecCCCccccc------hHHhHHHHHHHhc
Confidence 45544444 45588777533 333333 4567889999999854 4447778888764
No 142
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.11 E-value=7.9e-05 Score=64.65 Aligned_cols=99 Identities=18% Similarity=0.289 Sum_probs=66.4
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCC-CCchh---hHHHHHHHHHHhcccccCCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-YPCAY---DDGWTVLKWAKSRSWLQSKD 179 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-~~~~~---~D~~~a~~~l~~~~~~~~~d 179 (344)
+. ++||-+||.. ||... +..+...|.+ .|+.++.++|+.....+ ++... .+-..-.+.+.+. .+++
T Consensus 34 ~~-gTVv~~hGsP---GSH~D--FkYi~~~l~~-~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~---l~i~ 103 (297)
T PF06342_consen 34 PL-GTVVAFHGSP---GSHND--FKYIRPPLDE-AGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDE---LGIK 103 (297)
T ss_pred Cc-eeEEEecCCC---CCccc--hhhhhhHHHH-cCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHH---cCCC
Confidence 55 7999999943 45544 4444445554 59999999999764332 22222 2223333334443 3355
Q ss_pred CCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 180 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
+ +++.+|||.|+-.|+.++... +..|+++++|.
T Consensus 104 -~-~~i~~gHSrGcenal~la~~~-----~~~g~~lin~~ 136 (297)
T PF06342_consen 104 -G-KLIFLGHSRGCENALQLAVTH-----PLHGLVLINPP 136 (297)
T ss_pred -C-ceEEEEeccchHHHHHHHhcC-----ccceEEEecCC
Confidence 5 899999999999999999876 35688888875
No 143
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.08 E-value=0.00051 Score=58.75 Aligned_cols=180 Identities=19% Similarity=0.148 Sum_probs=101.6
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC--chhhHHHHHHHHHHhcccccCCCCC-Ce
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP--CAYDDGWTVLKWAKSRSWLQSKDSK-AH 183 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~--~~~~D~~~a~~~l~~~~~~~~~d~~-~~ 183 (344)
-.||.|=||.|+. ....-+|+.+...|+++ ||+|++.-|...=.|--- ...+.-..+++.+.+... .++. .+
T Consensus 17 ~gvihFiGGaf~g-a~P~itYr~lLe~La~~-Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~---~~~~~lP 91 (250)
T PF07082_consen 17 KGVIHFIGGAFVG-AAPQITYRYLLERLADR-GYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGG---LDPAYLP 91 (250)
T ss_pred CEEEEEcCcceec-cCcHHHHHHHHHHHHhC-CcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcC---CCcccCC
Confidence 4688999999875 55666799999999998 999999999754333111 112233334444444332 2211 26
Q ss_pred EEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCC--CChhhhhhC---CCCcc--CHHhHHHHHHHhCCCCCC
Q 019193 184 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE--RTESEKRLD---GKYFV--TVQDRDWYWRAYLPEGAN 256 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~--~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~ 256 (344)
++=+|||+|+-+-+.+...... .-+|.+++|= -+... ..+-...+. ...+. +.+..+...+.|
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~~---~r~gniliSF-NN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~~li~~~Y------ 161 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFDV---ERAGNILISF-NNFPADEAIPLLEQLAPALRLEFTPSPEETRRLIRESY------ 161 (250)
T ss_pred eeeeecccchHHHHHHhhhccC---cccceEEEec-CChHHHhhCchHhhhccccccCccCCHHHHHHHHHHhc------
Confidence 8889999999998887766533 2356666551 00000 000000000 00010 011111111111
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCC-CEEEEEeCCCceEEEE
Q 019193 257 RDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQ-DVKLLYLEQATIGFYF 322 (344)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~-~~~~~~~~g~~H~f~~ 322 (344)
..+.++++-=++|.+ |++..+.+.|+.... -++....+| .|.-..
T Consensus 162 -------------------~~~rnLLIkF~~D~i-Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl 207 (250)
T PF07082_consen 162 -------------------QVRRNLLIKFNDDDI-DQTDELEQILQQRFPDMVSIQTLPG-NHLTPL 207 (250)
T ss_pred -------------------CCccceEEEecCCCc-cchHHHHHHHhhhccccceEEeCCC-CCCCcC
Confidence 045678887777766 888888899986542 356677775 887654
No 144
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.03 E-value=2.6e-05 Score=74.33 Aligned_cols=134 Identities=16% Similarity=0.202 Sum_probs=89.6
Q ss_pred ceEEEEEEe--CCCCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHH---HHHhh
Q 019193 63 VFSFDVIVD--RGTNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCR---RLVGT 137 (344)
Q Consensus 63 ~~~~~~~~~--~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~---~la~~ 137 (344)
...+++.++ ++..+..+||+|++. ++. |+++..+=..+...+........... .++.+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~----------------g~~-Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~ 79 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA----------------GPL-PVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQ 79 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC----------------CCC-ceeEEeeccccccccccCcchhhcccccceeecC
Confidence 444455554 455588899999976 477 99999983222221100000111122 46666
Q ss_pred CCcEEEeeccCCCCCC--C---CC-chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeee
Q 019193 138 CKAVVVSVNYRRAPEN--R---YP-CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEIL 211 (344)
Q Consensus 138 ~g~~vv~~dyr~~p~~--~---~~-~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~ 211 (344)
||+||..|-|..... - +- ...+|..+.++|+.+.+. .+ + +|..+|-|.+|...+++|...+ +.++
T Consensus 80 -GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpW---sN-G-~Vgm~G~SY~g~tq~~~Aa~~p---PaLk 150 (563)
T COG2936 80 -GYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPW---SN-G-NVGMLGLSYLGFTQLAAAALQP---PALK 150 (563)
T ss_pred -ceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCc---cC-C-eeeeecccHHHHHHHHHHhcCC---chhe
Confidence 999999999965322 1 12 377899999999999876 33 4 8999999999999998887643 3577
Q ss_pred EEEEeccccCC
Q 019193 212 GNILLNPMFGG 222 (344)
Q Consensus 212 ~~il~~p~~~~ 222 (344)
+++..++..|.
T Consensus 151 ai~p~~~~~D~ 161 (563)
T COG2936 151 AIAPTEGLVDR 161 (563)
T ss_pred eeccccccccc
Confidence 77776666553
No 145
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.02 E-value=6e-05 Score=65.75 Aligned_cols=151 Identities=16% Similarity=-0.003 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcc-c-CCeeeEEEEeccccCCCCCChhhh---hh-C
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-S-EVEILGNILLNPMFGGQERTESEK---RL-D 233 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~-~-~~~i~~~il~~p~~~~~~~~~~~~---~~-~ 233 (344)
.-+..++.++.++ |++ . ++-++||||||..++.++..... . -+++..+|.+..-++......... .+ .
T Consensus 87 ~wl~~vl~~L~~~---Y~~--~-~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~ 160 (255)
T PF06028_consen 87 KWLKKVLKYLKKK---YHF--K-KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNK 160 (255)
T ss_dssp HHHHHHHHHHHHC---C----S-EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CST
T ss_pred HHHHHHHHHHHHh---cCC--C-EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcc
Confidence 4445566666665 334 4 99999999999999988777643 2 258999998887666543221110 00 0
Q ss_pred CCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcC------CCcChHH--HHHHHHHHHHCC
Q 019193 234 GKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAG------LDLIQDW--QLAYMEGLKKAG 305 (344)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~------~D~l~~~--~~~~~~~L~~~g 305 (344)
..|-......+.+...+ + ..+.. .-.+|-+.|. .|-.++. +..+..-++...
T Consensus 161 ~gp~~~~~~y~~l~~~~------~------------~~~p~--~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~ 220 (255)
T PF06028_consen 161 NGPKSMTPMYQDLLKNR------R------------KNFPK--NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRA 220 (255)
T ss_dssp T-BSS--HHHHHHHHTH------G------------GGSTT--T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTS
T ss_pred cCCcccCHHHHHHHHHH------H------------hhCCC--CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhccc
Confidence 01111111112221110 0 00000 1259999998 5655554 344434445555
Q ss_pred CCEEEEEeCC--CceEEEECCCchHHHHHHHHHHHHHh
Q 019193 306 QDVKLLYLEQ--ATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 306 ~~~~~~~~~g--~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
...+-.++.| +.|.- +.+..++.+.|.+||-
T Consensus 221 ~~Y~e~~v~G~~a~HS~-----LheN~~V~~~I~~FLw 253 (255)
T PF06028_consen 221 KSYQEKTVTGKDAQHSQ-----LHENPQVDKLIIQFLW 253 (255)
T ss_dssp SEEEEEEEESGGGSCCG-----GGCCHHHHHHHHHHHC
T ss_pred CceEEEEEECCCCcccc-----CCCCHHHHHHHHHHhc
Confidence 5677777766 57853 3556778899999984
No 146
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.96 E-value=0.00056 Score=62.68 Aligned_cols=57 Identities=21% Similarity=-0.064 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
-|...|+.++..+-...+ +.- +++.+|+|-||.||...+.-++- .+.+++-.|.|.-
T Consensus 164 iD~INAl~~l~k~~~~~~-~~l-p~I~~G~s~G~yla~l~~k~aP~---~~~~~iDns~~~~ 220 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNG-GGL-PKIYIGSSHGGYLAHLCAKIAPW---LFDGVIDNSSYAL 220 (403)
T ss_pred HHHHHHHHHHHHhhhccc-CCC-cEEEEecCcHHHHHHHHHhhCcc---ceeEEEecCcccc
Confidence 477777777777633222 223 89999999999999988876654 5888888777654
No 147
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.94 E-value=3.1e-05 Score=66.21 Aligned_cols=71 Identities=24% Similarity=0.252 Sum_probs=56.8
Q ss_pred cEEEeeccCCCCCCC------CC-chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeE
Q 019193 140 AVVVSVNYRRAPENR------YP-CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILG 212 (344)
Q Consensus 140 ~~vv~~dyr~~p~~~------~~-~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~ 212 (344)
|.|+++|.|...... ++ -..+|..+.++.+++. ...+ ++.++|+|+||.+++.++...++ ++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~-~~~~vG~S~Gg~~~~~~a~~~p~---~v~~ 71 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREA-----LGIK-KINLVGHSMGGMLALEYAAQYPE---RVKK 71 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHH-----HTTS-SEEEEEETHHHHHHHHHHHHSGG---GEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHH-----hCCC-CeEEEEECCChHHHHHHHHHCch---hhcC
Confidence 568999999765544 11 2357888888888886 3345 89999999999999999999887 7999
Q ss_pred EEEeccc
Q 019193 213 NILLNPM 219 (344)
Q Consensus 213 ~il~~p~ 219 (344)
++++++.
T Consensus 72 lvl~~~~ 78 (230)
T PF00561_consen 72 LVLISPP 78 (230)
T ss_dssp EEEESES
T ss_pred cEEEeee
Confidence 9999985
No 148
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.87 E-value=0.00011 Score=63.91 Aligned_cols=101 Identities=21% Similarity=0.155 Sum_probs=67.2
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCC--CCCCCchhhHHHHH-HHHHHhcccccCCCCCCe
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP--ENRYPCAYDDGWTV-LKWAKSRSWLQSKDSKAH 183 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p--~~~~~~~~~D~~~a-~~~l~~~~~~~~~d~~~~ 183 (344)
|.+..||+++. +.. .|..++..+... ..|+..+++... +.++ ..++|..+. ++-+++ +.|.++
T Consensus 1 ~pLF~fhp~~G---~~~--~~~~L~~~l~~~--~~v~~l~a~g~~~~~~~~-~~l~~~a~~yv~~Ir~------~QP~GP 66 (257)
T COG3319 1 PPLFCFHPAGG---SVL--AYAPLAAALGPL--LPVYGLQAPGYGAGEQPF-ASLDDMAAAYVAAIRR------VQPEGP 66 (257)
T ss_pred CCEEEEcCCCC---cHH--HHHHHHHHhccC--ceeeccccCccccccccc-CCHHHHHHHHHHHHHH------hCCCCC
Confidence 46788999542 221 266666666653 778888887542 2222 233443333 233333 234449
Q ss_pred EEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccC
Q 019193 184 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 221 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~ 221 (344)
+.|.|+|.||++|..+|.++...+..++.++++.++..
T Consensus 67 y~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999999999999887778888888887766
No 149
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.85 E-value=4.1e-05 Score=54.17 Aligned_cols=54 Identities=24% Similarity=0.300 Sum_probs=41.9
Q ss_pred CeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC
Q 019193 75 NLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE 152 (344)
Q Consensus 75 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~ 152 (344)
.+.++.|.|++. ++ .+|+++||-+.. ...|..++..|+++ |+.|+..|+|....
T Consensus 3 ~L~~~~w~p~~~-----------------~k-~~v~i~HG~~eh-----~~ry~~~a~~L~~~-G~~V~~~D~rGhG~ 56 (79)
T PF12146_consen 3 KLFYRRWKPENP-----------------PK-AVVVIVHGFGEH-----SGRYAHLAEFLAEQ-GYAVFAYDHRGHGR 56 (79)
T ss_pred EEEEEEecCCCC-----------------CC-EEEEEeCCcHHH-----HHHHHHHHHHHHhC-CCEEEEECCCcCCC
Confidence 466778877653 56 999999995532 23489999999998 99999999996443
No 150
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.82 E-value=0.00028 Score=64.56 Aligned_cols=225 Identities=16% Similarity=0.181 Sum_probs=123.5
Q ss_pred eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCc---ccccCCCchhhHHHHHHHHhhCCcEEEeeccC----
Q 019193 76 LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGS---FAHSSANSAIYDILCRRLVGTCKAVVVSVNYR---- 148 (344)
Q Consensus 76 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg---~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr---- 148 (344)
..+.|+.|++. ..+. .+++++-||. +...... .....+..+|..+|.+|+.+..-
T Consensus 50 H~l~I~vP~~~---------------~~~~-~all~i~gG~~~~~~~~~~~--~~~~~~~~~A~~t~siv~~l~qvPNQp 111 (367)
T PF10142_consen 50 HWLTIYVPKND---------------KNPD-TALLFITGGSNRNWPGPPPD--FDDELLQMIARATGSIVAILYQVPNQP 111 (367)
T ss_pred EEEEEEECCCC---------------CCCc-eEEEEEECCcccCCCCCCCc--chHHHHHHHHHhcCCEEEEeCcCCCCC
Confidence 45678888873 2355 8899999987 3322222 24678899999999888876421
Q ss_pred C----CCC--------------------CCCC---chhhHHHHHHHHHHhcccc-cCCCCCCeEEEeeCCchHHHHHHHH
Q 019193 149 R----APE--------------------NRYP---CAYDDGWTVLKWAKSRSWL-QSKDSKAHIYLAGDSSGGNIVHHVA 200 (344)
Q Consensus 149 ~----~p~--------------------~~~~---~~~~D~~~a~~~l~~~~~~-~~~d~~~~i~l~G~SaGG~lA~~~a 200 (344)
+ .+. ..++ .+..-+..|++-+.+...+ .+++.+ +++|.|.|=-|..+...|
T Consensus 112 l~f~~d~~~r~ED~iIAytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~-~FvV~GaSKRGWTtWlta 190 (367)
T PF10142_consen 112 LTFDNDPKPRTEDAIIAYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIE-KFVVTGASKRGWTTWLTA 190 (367)
T ss_pred eEeCCCCccccHHHHHHHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCcc-EEEEeCCchHhHHHHHhh
Confidence 1 111 1111 1123333444444433222 346777 999999999999998877
Q ss_pred HHhcccCCeeeEEE-EeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCC-------CCCCCCCCCCCc
Q 019193 201 LRAVESEVEILGNI-LLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHP-------ACNPFGPKGIDL 272 (344)
Q Consensus 201 ~~~~~~~~~i~~~i-l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 272 (344)
.. + .+|++++ ...+.++.........+.-+. .++....+++.... . ...+.+ ...|+. ..
T Consensus 191 a~--D--~RV~aivP~Vid~LN~~~~l~h~y~~yG~-~ws~a~~dY~~~gi-~--~~l~tp~f~~L~~ivDP~~----Y~ 258 (367)
T PF10142_consen 191 AV--D--PRVKAIVPIVIDVLNMKANLEHQYRSYGG-NWSFAFQDYYNEGI-T--QQLDTPEFDKLMQIVDPYS----YR 258 (367)
T ss_pred cc--C--cceeEEeeEEEccCCcHHHHHHHHHHhCC-CCccchhhhhHhCc-h--hhcCCHHHHHHHHhcCHHH----HH
Confidence 72 2 3677776 344555544332222111110 11111111111000 0 000011 122221 11
Q ss_pred CCCCCCcEEEEEcCCCcC-h-HHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 273 VGVKFPKSLVVVAGLDLI-Q-DWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 273 ~~~~~pP~li~~G~~D~l-~-~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
+.+ .-|-||+.|+.|.+ . |.+.-|...|.. +..+..+|+++|... ..++.+.+..|+.+
T Consensus 259 ~rL-~~PK~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vPN~~H~~~-------~~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 259 DRL-TMPKYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVPNAGHSLI-------GSDVVQSLRAFYNR 319 (367)
T ss_pred Hhc-CccEEEEecCCCceeccCchHHHHhhCCC---CeeEEeCCCCCcccc-------hHHHHHHHHHHHHH
Confidence 222 22688888888865 3 456777777764 679999999999764 25677778888764
No 151
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.78 E-value=0.0041 Score=57.88 Aligned_cols=88 Identities=11% Similarity=-0.047 Sum_probs=57.5
Q ss_pred HHHHHHHHhhCCcEEEeeccCCCCCCCCC---chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhc
Q 019193 128 DILCRRLVGTCKAVVVSVNYRRAPENRYP---CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 204 (344)
Q Consensus 128 ~~~~~~la~~~g~~vv~~dyr~~p~~~~~---~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~ 204 (344)
+.+.+.|.. |+.|+..|+......+.. -.++|-...+.-..+. +. . ++.|+|.|+||.++++.+....
T Consensus 120 RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~-----~G-~-~v~l~GvCqgG~~~laa~Al~a 190 (406)
T TIGR01849 120 RSTVEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRF-----LG-P-DIHVIAVCQPAVPVLAAVALMA 190 (406)
T ss_pred HHHHHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHH-----hC-C-CCcEEEEchhhHHHHHHHHHHH
Confidence 455666665 999999999876544322 2334443322222222 22 2 5889999999999998776654
Q ss_pred ccC--CeeeEEEEeccccCCCC
Q 019193 205 ESE--VEILGNILLNPMFGGQE 224 (344)
Q Consensus 205 ~~~--~~i~~~il~~p~~~~~~ 224 (344)
+.+ .+++.++++.+.+|...
T Consensus 191 ~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 191 ENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred hcCCCCCcceEEEEecCccCCC
Confidence 433 36999998888877654
No 152
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.78 E-value=0.00017 Score=60.51 Aligned_cols=70 Identities=20% Similarity=0.189 Sum_probs=51.6
Q ss_pred hhHHHHHHHHhhCCcEEEeeccCCCCCCCC-----------CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHH
Q 019193 126 IYDILCRRLVGTCKAVVVSVNYRRAPENRY-----------PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGN 194 (344)
Q Consensus 126 ~~~~~~~~la~~~g~~vv~~dyr~~p~~~~-----------~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~ 194 (344)
.|..++...+.+ |+.|+..|||...+..- .-+..|.-++++++++... .. +.+.+|||+||+
T Consensus 45 fYRrfA~~a~~~-Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~-----~~-P~y~vgHS~GGq 117 (281)
T COG4757 45 FYRRFAAAAAKA-GFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP-----GH-PLYFVGHSFGGQ 117 (281)
T ss_pred HhHHHHHHhhcc-CceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCC-----CC-ceEEeeccccce
Confidence 367777666666 99999999997544321 2345799999999988532 23 899999999999
Q ss_pred HHHHHHHH
Q 019193 195 IVHHVALR 202 (344)
Q Consensus 195 lA~~~a~~ 202 (344)
+--.+.++
T Consensus 118 a~gL~~~~ 125 (281)
T COG4757 118 ALGLLGQH 125 (281)
T ss_pred eecccccC
Confidence 86665554
No 153
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.77 E-value=0.00047 Score=61.48 Aligned_cols=93 Identities=17% Similarity=0.176 Sum_probs=66.5
Q ss_pred cEEEEEcCCcccccCCCc-hhhHHHHHHHHhhCCcEEEeeccCCCCCCC----CCchhhHHHHHHHHHHhcccccCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANS-AIYDILCRRLVGTCKAVVVSVNYRRAPENR----YPCAYDDGWTVLKWAKSRSWLQSKDSK 181 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~-~~~~~~~~~la~~~g~~vv~~dyr~~p~~~----~~~~~~D~~~a~~~l~~~~~~~~~d~~ 181 (344)
.-|+++-|-|........ ...+.....++.+++.+|+.+|||...... ..+.+.|..+.++|++++.. |+.+.
T Consensus 138 RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~--G~ka~ 215 (365)
T PF05677_consen 138 RWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQ--GPKAK 215 (365)
T ss_pred cEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhccc--CCChh
Confidence 679999996654433110 001345678888999999999999643322 24556788888999987632 47888
Q ss_pred CeEEEeeCCchHHHHHHHHHH
Q 019193 182 AHIYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 182 ~~i~l~G~SaGG~lA~~~a~~ 202 (344)
+|++.|||.||.+++.....
T Consensus 216 -~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 216 -NIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred -eEEEeeccccHHHHHHHHHh
Confidence 99999999999998875544
No 154
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.77 E-value=0.0021 Score=51.87 Aligned_cols=52 Identities=23% Similarity=0.220 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
++|..+.+.--... . ++ .++|++||.|.-+++..+.+... +|+|+++++|.-
T Consensus 43 ~~dWi~~l~~~v~a-----~-~~-~~vlVAHSLGc~~v~h~~~~~~~---~V~GalLVAppd 94 (181)
T COG3545 43 LDDWIARLEKEVNA-----A-EG-PVVLVAHSLGCATVAHWAEHIQR---QVAGALLVAPPD 94 (181)
T ss_pred HHHHHHHHHHHHhc-----c-CC-CeEEEEecccHHHHHHHHHhhhh---ccceEEEecCCC
Confidence 45655555444333 2 34 69999999999999998887654 799999999974
No 155
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.67 E-value=0.00037 Score=60.30 Aligned_cols=106 Identities=15% Similarity=0.088 Sum_probs=60.0
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCc--EEEeeccCCCCCC-CCCchh-------hHHHHHHHHHHhcc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKA--VVVSVNYRRAPEN-RYPCAY-------DDGWTVLKWAKSRS 173 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~--~vv~~dyr~~p~~-~~~~~~-------~D~~~a~~~l~~~~ 173 (344)
.. .++||+||-. ..-.. -...++++....++ .++.+.++-.... .|...- .+....++.+.+.
T Consensus 17 ~~-~vlvfVHGyn----~~f~~-a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 17 DK-EVLVFVHGYN----NSFED-ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CC-eEEEEEeCCC----CCHHH-HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc-
Confidence 45 8999999932 11111 12234455555544 5777776643221 122111 2223333333333
Q ss_pred cccCCCCCCeEEEeeCCchHHHHHHHHHHhcccC------CeeeEEEEeccccC
Q 019193 174 WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE------VEILGNILLNPMFG 221 (344)
Q Consensus 174 ~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~------~~i~~~il~~p~~~ 221 (344)
.... +|.|++||||+.+.+.......... .++..+++.+|-++
T Consensus 90 ----~~~~-~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 90 ----PGIK-RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred ----cCCc-eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 1235 9999999999999998766653321 36778888888654
No 156
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.62 E-value=0.00013 Score=69.29 Aligned_cols=105 Identities=16% Similarity=0.183 Sum_probs=67.5
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCC-CC-------------CchhhHHHHHHHHHHhc
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-RY-------------PCAYDDGWTVLKWAKSR 172 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~-~~-------------~~~~~D~~~a~~~l~~~ 172 (344)
|++||+=|=| -.... .....+...||++.|..++++++|--.+. |+ .++++|+...+++++..
T Consensus 30 pifl~~ggE~-~~~~~--~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 30 PIFLYIGGEG-PIEPF--WINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp EEEEEE--SS--HHHH--HHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCC-ccchh--hhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 9888885532 11111 11244778999999999999999954332 22 35678999999999854
Q ss_pred ccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 173 SWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 173 ~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
-. ..+.. +++++|.|.||.||+.+-.++++ .+.|.+..|+.+
T Consensus 107 ~~--~~~~~-pwI~~GgSY~G~Laaw~r~kyP~---~~~ga~ASSapv 148 (434)
T PF05577_consen 107 YN--TAPNS-PWIVFGGSYGGALAAWFRLKYPH---LFDGAWASSAPV 148 (434)
T ss_dssp TT--TGCC---EEEEEETHHHHHHHHHHHH-TT---T-SEEEEET--C
T ss_pred hc--CCCCC-CEEEECCcchhHHHHHHHhhCCC---eeEEEEecccee
Confidence 21 12345 99999999999999999998887 588888877653
No 157
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.61 E-value=0.016 Score=54.69 Aligned_cols=108 Identities=19% Similarity=0.134 Sum_probs=68.9
Q ss_pred eEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEE----cCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCC
Q 019193 76 LLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFF----HGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP 151 (344)
Q Consensus 76 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~----HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p 151 (344)
..+||..|.+.. ....++ |+||.= ||-| +.|.+.. ....-.| +.|.-|..+.+.-.|
T Consensus 52 aLlrI~pp~~~~------------~d~~kr-P~vViDPRAGHGpG-IGGFK~d---SevG~AL--~~GHPvYFV~F~p~P 112 (581)
T PF11339_consen 52 ALLRITPPEGVP------------VDPTKR-PFVVIDPRAGHGPG-IGGFKPD---SEVGVAL--RAGHPVYFVGFFPEP 112 (581)
T ss_pred eEEEeECCCCCC------------CCCCCC-CeEEeCCCCCCCCC-ccCCCcc---cHHHHHH--HcCCCeEEEEecCCC
Confidence 456777776642 234466 877765 7743 2233322 2333333 338888888877655
Q ss_pred CCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcc
Q 019193 152 ENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE 205 (344)
Q Consensus 152 ~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~ 205 (344)
+- -+.++|+..+...+.+......-+.. +.+|+|-+.||..++++|...++
T Consensus 113 ~p--gQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 113 EP--GQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred CC--CCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcC
Confidence 53 24578887777666654433333445 89999999999999999998876
No 158
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.54 E-value=0.0042 Score=52.86 Aligned_cols=191 Identities=15% Similarity=0.064 Sum_probs=93.6
Q ss_pred CCCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCC----C----CCCCCCchhhHHHHHHHHHHhcc
Q 019193 102 SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR----A----PENRYPCAYDDGWTVLKWAKSRS 173 (344)
Q Consensus 102 ~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~----~----p~~~~~~~~~D~~~a~~~l~~~~ 173 (344)
..+. ++||..-|-| .....|..++.+|+.. |+.|+.+|--. + -+.+.....+|+..+++|+...+
T Consensus 27 ~~~~-~tiliA~Gf~-----rrmdh~agLA~YL~~N-GFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~g 99 (294)
T PF02273_consen 27 PKRN-NTILIAPGFA-----RRMDHFAGLAEYLSAN-GFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATRG 99 (294)
T ss_dssp ---S--EEEEE-TT------GGGGGGHHHHHHHHTT-T--EEEE---B-------------HHHHHHHHHHHHHHHHHTT
T ss_pred cccC-CeEEEecchh-----HHHHHHHHHHHHHhhC-CeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhcC
Confidence 3455 8999999933 2233478999999988 99999888541 1 23344466789999999999663
Q ss_pred cccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhC----------CC-CccCHH-
Q 019193 174 WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLD----------GK-YFVTVQ- 241 (344)
Q Consensus 174 ~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~----------~~-~~~~~~- 241 (344)
.. ++.|+-.|.-|-+|..++... .+..+|+.-++++++........++ .. .+..-.
T Consensus 100 ------~~-~~GLIAaSLSaRIAy~Va~~i-----~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l 167 (294)
T PF02273_consen 100 ------IR-RIGLIAASLSARIAYEVAADI-----NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHNL 167 (294)
T ss_dssp ----------EEEEEETTHHHHHHHHTTTS-------SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEEE
T ss_pred ------CC-cchhhhhhhhHHHHHHHhhcc-----CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCccccccccc
Confidence 34 899999999999999988743 3666777777776543221111000 00 000000
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHC-CCCEEEEEeCCCceEE
Q 019193 242 DRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKA-GQDVKLLYLEQATIGF 320 (344)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~-g~~~~~~~~~g~~H~f 320 (344)
..+.|....+..+ ++...+- ..+.+.+ -.|++.+++++|.-+.+. +..+.+... ...++++..+|..|..
T Consensus 168 ~~~vFv~dc~e~~---w~~l~ST----~~~~k~l-~iP~iaF~A~~D~WV~q~-eV~~~~~~~~s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 168 GAEVFVTDCFEHG---WDDLDST----INDMKRL-SIPFIAFTANDDDWVKQS-EVEELLDNINSNKCKLYSLPGSSHDL 238 (294)
T ss_dssp EHHHHHHHHHHTT----SSHHHH----HHHHTT---S-EEEEEETT-TTS-HH-HHHHHHTT-TT--EEEEEETT-SS-T
T ss_pred chHHHHHHHHHcC---CccchhH----HHHHhhC-CCCEEEEEeCCCccccHH-HHHHHHHhcCCCceeEEEecCccchh
Confidence 0111211111100 0010000 0111111 238999999999887765 344555433 3568999999999964
No 159
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.53 E-value=0.0042 Score=53.03 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=62.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhC----CcEEEeec----------cCCCCC------------CCCCchhh
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTC----KAVVVSVN----------YRRAPE------------NRYPCAYD 160 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~----g~~vv~~d----------yr~~p~------------~~~~~~~~ 160 (344)
|+ ||+||.| |+..+ ...++.++..+. ...++.+| |+..-. ........
T Consensus 47 PT-IfIhGsg---G~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~ 120 (288)
T COG4814 47 PT-IFIHGSG---GTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSK 120 (288)
T ss_pred ce-EEEecCC---CChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHH
Confidence 64 7999955 34444 577788887752 12233333 221111 12223334
Q ss_pred HHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhccc--CCeeeEEEEeccccC
Q 019193 161 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES--EVEILGNILLNPMFG 221 (344)
Q Consensus 161 D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~--~~~i~~~il~~p~~~ 221 (344)
=...++.+|.++ .+-. ++-.+||||||.-...+....... -+++..++.+..-++
T Consensus 121 wlk~~msyL~~~-----Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 121 WLKKAMSYLQKH-----YNIP-KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHh-----cCCc-eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 455677777777 3344 899999999998887777665432 256777887776554
No 160
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.53 E-value=0.0014 Score=62.38 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=90.7
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhC-CcEEEeeccCCCCC-CCCCchhhHHHHHHHHHHhc-ccccCCCCCCe
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTC-KAVVVSVNYRRAPE-NRYPCAYDDGWTVLKWAKSR-SWLQSKDSKAH 183 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~-g~~vv~~dyr~~p~-~~~~~~~~D~~~a~~~l~~~-~~~~~~d~~~~ 183 (344)
|+++++||++- .+. ..+++..+-.++.... -.-|..+||+..-. ...-...+-...+.++.... ..+ .... .
T Consensus 177 pl~i~aps~p~-ap~-tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~ge--fpha-~ 251 (784)
T KOG3253|consen 177 PLAIKAPSTPL-APK-TSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGE--FPHA-P 251 (784)
T ss_pred ceEEeccCCCC-CCc-cchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhcc--CCCC-c
Confidence 89999999882 222 2233445544544431 24455666663222 22222223333333332221 111 3344 9
Q ss_pred EEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCC
Q 019193 184 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACN 263 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (344)
|+|+|.|||+-++..+.... .+..++++|++.=-++..... ...+++..
T Consensus 252 IiLvGrsmGAlVachVSpsn--sdv~V~~vVCigypl~~vdgp---------------------------rgirDE~L-- 300 (784)
T KOG3253|consen 252 IILVGRSMGALVACHVSPSN--SDVEVDAVVCIGYPLDTVDGP---------------------------RGIRDEAL-- 300 (784)
T ss_pred eEEEecccCceeeEEecccc--CCceEEEEEEecccccCCCcc---------------------------cCCcchhh--
Confidence 99999999976666655432 234588888765222211100 01111111
Q ss_pred CCCCCCCCcCCCCCCcEEEEEcCCCcChHHH--HHHHHHHHHCCCCEEEEEeCCCceEEEE
Q 019193 264 PFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYF 322 (344)
Q Consensus 264 ~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~g~~H~f~~ 322 (344)
.+.+ -|+|++.|..|...... +.+.+++++ +++++++.+++|.+-.
T Consensus 301 ------ldmk----~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 301 ------LDMK----QPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMAI 348 (784)
T ss_pred ------HhcC----CceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCccccC
Confidence 1112 28999999999886532 445555554 6799999999998864
No 161
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.49 E-value=0.00021 Score=56.96 Aligned_cols=183 Identities=13% Similarity=0.138 Sum_probs=106.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcE-EEeeccCCCCCC------CCCchhhHHHHHHHHHHhcccccCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV-VVSVNYRRAPEN------RYPCAYDDGWTVLKWAKSRSWLQSKD 179 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~-vv~~dyr~~p~~------~~~~~~~D~~~a~~~l~~~~~~~~~d 179 (344)
|+|+|---||=...-.+.+... -++.+.+. |.+ .+.++ .+..|. .--+.++--.+..+|+.+.+ -
T Consensus 28 pVvvFpts~Grf~eyed~G~v~-ala~fie~-G~vQlft~~-gldsESf~a~h~~~adr~~rH~AyerYv~eEa-----l 99 (227)
T COG4947 28 PVVVFPTSGGRFNEYEDFGMVD-ALASFIEE-GLVQLFTLS-GLDSESFLATHKNAADRAERHRAYERYVIEEA-----L 99 (227)
T ss_pred cEEEEecCCCcchhhhhcccHH-HHHHHHhc-CcEEEEEec-ccchHhHhhhcCCHHHHHHHHHHHHHHHHHhh-----c
Confidence 8888887665322222222222 23444444 543 33333 122222 11223344455667888774 3
Q ss_pred CCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCC
Q 019193 180 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDH 259 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
|. +..+.|-||||..|+.+..+.++ ...++|.+|+..+.+...... ++++.+.+.. ..|+|+-.
T Consensus 100 pg-s~~~sgcsmGayhA~nfvfrhP~---lftkvialSGvYdardffg~y--yddDv~ynsP------~dylpg~~---- 163 (227)
T COG4947 100 PG-STIVSGCSMGAYHAANFVFRHPH---LFTKVIALSGVYDARDFFGGY--YDDDVYYNSP------SDYLPGLA---- 163 (227)
T ss_pred CC-CccccccchhhhhhhhhheeChh---HhhhheeecceeeHHHhcccc--ccCceeecCh------hhhccCCc----
Confidence 45 78999999999999999988877 477888999887654321100 0000000000 01111100
Q ss_pred CCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEE
Q 019193 260 PACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFY 321 (344)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~ 321 (344)
.|+ .++.++.-.+.++.|..|+..+..+.+.+.|.+..++..+.++.|..|.|.
T Consensus 164 ---dp~-----~l~rlr~~~~vfc~G~e~~~L~~~~~L~~~l~dKqipaw~~~WggvaHdw~ 217 (227)
T COG4947 164 ---DPF-----RLERLRRIDMVFCIGDEDPFLDNNQHLSRLLSDKQIPAWMHVWGGVAHDWG 217 (227)
T ss_pred ---ChH-----HHHHHhhccEEEEecCccccccchHHHHHHhccccccHHHHHhcccccccH
Confidence 010 011111225888899999999999999999999999999999999999763
No 162
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.43 E-value=0.0018 Score=54.20 Aligned_cols=121 Identities=15% Similarity=0.039 Sum_probs=74.1
Q ss_pred HHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcc-----cCCeeeEEEEeccccCCCCCChhhhhhCCCC
Q 019193 162 GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-----SEVEILGNILLNPMFGGQERTESEKRLDGKY 236 (344)
Q Consensus 162 ~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~-----~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~ 236 (344)
+..+.+|+.+++- .| .|.|+|.|++|+..++..... ..++++..|++|++........
T Consensus 92 l~yl~~~i~enGP---FD-----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~--------- 154 (230)
T KOG2551|consen 92 LEYLEDYIKENGP---FD-----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLD--------- 154 (230)
T ss_pred HHHHHHHHHHhCC---Cc-----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhh---------
Confidence 3444455556643 33 489999999999999883211 2357899999999764211000
Q ss_pred ccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHHH--HHHHHHHHHCCCCEEEEEeC
Q 019193 237 FVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLE 314 (344)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~~--~~~~~~L~~~g~~~~~~~~~ 314 (344)
..+ .. ..++ .|+|-+.|+.|.+++.+ ..+++..+.. .+...+
T Consensus 155 -----------~~~----------~~-------~~i~----~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~Hp 198 (230)
T KOG2551|consen 155 -----------ESA----------YK-------RPLS----TPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHP 198 (230)
T ss_pred -----------hhh----------hc-------cCCC----CCeeEEecccceeecchHHHHHHHhcCCC----eEEecC
Confidence 000 00 1122 27999999999998765 5555554433 555656
Q ss_pred CCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 315 QATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 315 g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
| +|.+. ......+.+.+||+.
T Consensus 199 g-gH~VP------~~~~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 199 G-GHIVP------NKAKYKEKIADFIQS 219 (230)
T ss_pred C-CccCC------CchHHHHHHHHHHHH
Confidence 5 89653 244577777787764
No 163
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.33 E-value=0.096 Score=47.37 Aligned_cols=196 Identities=13% Similarity=0.123 Sum_probs=109.1
Q ss_pred CCeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCc-hhhHHHHHHHHhhCCcEEEeeccCCC--
Q 019193 74 TNLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANS-AIYDILCRRLVGTCKAVVVSVNYRRA-- 150 (344)
Q Consensus 74 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~-~~~~~~~~~la~~~g~~vv~~dyr~~-- 150 (344)
+.-..-+|+|... ..+. .+||.+||-|. +.++ .....+-+.|.+ .|+.++++.-+.-
T Consensus 71 ~~~flaL~~~~~~---------------~~~~-G~vIilp~~g~---~~d~p~~i~~LR~~L~~-~GW~Tlsit~P~~~~ 130 (310)
T PF12048_consen 71 EERFLALWRPANS---------------AKPQ-GAVIILPDWGE---HPDWPGLIAPLRRELPD-HGWATLSITLPDPAP 130 (310)
T ss_pred CEEEEEEEecccC---------------CCCc-eEEEEecCCCC---CCCcHhHHHHHHHHhhh-cCceEEEecCCCccc
Confidence 3444556777654 3566 99999999653 3332 223344445554 4999999765530
Q ss_pred ---CC-------------CCCC----------------------chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCch
Q 019193 151 ---PE-------------NRYP----------------------CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSG 192 (344)
Q Consensus 151 ---p~-------------~~~~----------------------~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaG 192 (344)
|. .... ....-+.+++.++.+.+. . +|+|+|+..|
T Consensus 131 ~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~------~-~ivlIg~G~g 203 (310)
T PF12048_consen 131 PASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG------K-NIVLIGHGTG 203 (310)
T ss_pred ccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC------c-eEEEEEeChh
Confidence 00 0000 111344455555555532 3 6999999999
Q ss_pred HHHHHHHHHHhcccCCeeeEEEEeccccCCCCCChhhhhhCCCCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCc
Q 019193 193 GNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDL 272 (344)
Q Consensus 193 G~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (344)
+++++.+...... ..+.++|+++|......... . +. ..+
T Consensus 204 A~~~~~~la~~~~--~~~daLV~I~a~~p~~~~n~-------------~----l~----------------------~~l 242 (310)
T PF12048_consen 204 AGWAARYLAEKPP--PMPDALVLINAYWPQPDRNP-------------A----LA----------------------EQL 242 (310)
T ss_pred HHHHHHHHhcCCC--cccCeEEEEeCCCCcchhhh-------------h----HH----------------------HHh
Confidence 9999988776433 25889999999764322100 0 00 000
Q ss_pred CCCCCCcEEEEEcCCCcChHHHHHHHHHH-HH-CCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 273 VGVKFPKSLVVVAGLDLIQDWQLAYMEGL-KK-AGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 273 ~~~~~pP~li~~G~~D~l~~~~~~~~~~L-~~-~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
..+ ..|+|=++..........-...+.+ +. .....+-....+..|.+. .....+.++|.-||++|
T Consensus 243 a~l-~iPvLDi~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~-----~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 243 AQL-KIPVLDIYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS-----GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred hcc-CCCEEEEecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChh-----hHHHHHHHHHHHHHHhh
Confidence 111 1267777766533222222222222 22 234566677777777442 22344999999999876
No 164
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.30 E-value=0.0035 Score=59.90 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=45.3
Q ss_pred hhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcc-------cCCeeeEEEEeccccCCCCC
Q 019193 158 AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQER 225 (344)
Q Consensus 158 ~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~-------~~~~i~~~il~~p~~~~~~~ 225 (344)
..+|+..+++.+.+.-.. .... +++|+|+|+||+.+..++.+..+ ....++|+++..|+++....
T Consensus 150 ~a~d~~~~l~~f~~~~p~--~~~~-~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q 221 (462)
T PTZ00472 150 VSEDMYNFLQAFFGSHED--LRAN-DLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQ 221 (462)
T ss_pred HHHHHHHHHHHHHHhCcc--ccCC-CEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhhh
Confidence 446766666644433211 3445 89999999999999988887522 12578999999999876443
No 165
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.27 E-value=0.0056 Score=50.84 Aligned_cols=104 Identities=15% Similarity=0.226 Sum_probs=65.6
Q ss_pred CCcccEEEEEcCCccccc-----------CCCchhhHHHHHHHHhhCCcEEEeeccC---------CCCCCCCCchhhHH
Q 019193 103 EVVVPVIIFFHGGSFAHS-----------SANSAIYDILCRRLVGTCKAVVVSVNYR---------RAPENRYPCAYDDG 162 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g-----------~~~~~~~~~~~~~la~~~g~~vv~~dyr---------~~p~~~~~~~~~D~ 162 (344)
.+. ..+|+|||.|.+.. +.+.++...+.++-... ||-|+..+-. ..|.....+.++.+
T Consensus 99 ~~~-kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~-Gygviv~N~N~~~kfye~k~np~kyirt~veh~ 176 (297)
T KOG3967|consen 99 NPQ-KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAE-GYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHA 176 (297)
T ss_pred Ccc-ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHc-CCcEEEeCCchhhhhhhcccCcchhccchHHHH
Confidence 344 68999999887542 22222233444443333 6666655422 12444445667777
Q ss_pred HHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEE
Q 019193 163 WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNIL 215 (344)
Q Consensus 163 ~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il 215 (344)
..++..+... ..+. .|+++.||.||.+.+.+..+.++. .++.++.+
T Consensus 177 ~yvw~~~v~p-----a~~~-sv~vvahsyGG~~t~~l~~~f~~d-~~v~aial 222 (297)
T KOG3967|consen 177 KYVWKNIVLP-----AKAE-SVFVVAHSYGGSLTLDLVERFPDD-ESVFAIAL 222 (297)
T ss_pred HHHHHHHhcc-----cCcc-eEEEEEeccCChhHHHHHHhcCCc-cceEEEEe
Confidence 7777777665 3456 899999999999999998887543 34555444
No 166
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.24 E-value=0.0086 Score=55.05 Aligned_cols=85 Identities=18% Similarity=0.155 Sum_probs=58.9
Q ss_pred HHHHHHHHhhCCcEEEeeccCCCC----CCCCCchh-hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHH
Q 019193 128 DILCRRLVGTCKAVVVSVNYRRAP----ENRYPCAY-DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 128 ~~~~~~la~~~g~~vv~~dyr~~p----~~~~~~~~-~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~ 202 (344)
..+.+.+.++ |..|+.++.+.-- +..+.+-+ +++..+++.+.+... .+ +|-+.|+|.||++.+.++..
T Consensus 129 ~s~V~~l~~~-g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg-----~~-~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 129 KSLVRWLLEQ-GLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITG-----QK-DINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred ccHHHHHHHc-CCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhC-----cc-ccceeeEecchHHHHHHHHh
Confidence 5667777777 9999999987521 22333444 667777777777632 24 89999999999999987777
Q ss_pred hcccCCeeeEEEEeccccC
Q 019193 203 AVESEVEILGNILLNPMFG 221 (344)
Q Consensus 203 ~~~~~~~i~~~il~~p~~~ 221 (344)
.+.. +|+.+.++...+|
T Consensus 202 ~~~k--~I~S~T~lts~~D 218 (445)
T COG3243 202 MAAK--RIKSLTLLTSPVD 218 (445)
T ss_pred hhhc--ccccceeeecchh
Confidence 6553 5766665544434
No 167
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.20 E-value=0.0022 Score=54.92 Aligned_cols=90 Identities=17% Similarity=0.141 Sum_probs=47.5
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHh---hC-CcEEEeeccCCCCCCCCCchhhHH-HHHHHHHHhcccccCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVG---TC-KAVVVSVNYRRAPENRYPCAYDDG-WTVLKWAKSRSWLQSKDSK 181 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~---~~-g~~vv~~dyr~~p~~~~~~~~~D~-~~a~~~l~~~~~~~~~d~~ 181 (344)
-+||++|| ..|+... +..+...+.. +. +..++...|...-..++ ..++.+ ....+++.+..........
T Consensus 5 hLvV~vHG---L~G~~~d--~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~-~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 5 HLVVFVHG---LWGNPAD--MRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTF-DGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred EEEEEeCC---CCCCHHH--HHHHHHHHHHhhhhcchhhhhhhcccccccccc-hhhHHHHHHHHHHHHHhccccccccc
Confidence 78999999 2234322 3444444444 11 12222222322222222 333333 4455666655433333345
Q ss_pred CeEEEeeCCchHHHHHHHHHHh
Q 019193 182 AHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 182 ~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+|.++|||+||-++-.+....
T Consensus 79 -~IsfIgHSLGGli~r~al~~~ 99 (217)
T PF05057_consen 79 -KISFIGHSLGGLIARYALGLL 99 (217)
T ss_pred -cceEEEecccHHHHHHHHHHh
Confidence 899999999999997665544
No 168
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.20 E-value=0.00065 Score=57.86 Aligned_cols=83 Identities=14% Similarity=0.191 Sum_probs=47.4
Q ss_pred EEEEcCCcccccCCCchhhHHHHHHHHhhCCcE---EEeeccCCCCCCCCCchh-------hHHHHHHHHHHhcccccCC
Q 019193 109 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV---VVSVNYRRAPENRYPCAY-------DDGWTVLKWAKSRSWLQSK 178 (344)
Q Consensus 109 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~---vv~~dyr~~p~~~~~~~~-------~D~~~a~~~l~~~~~~~~~ 178 (344)
||++||-+ ++.. ..|..+...|.++ ||. |++++|-..+..+..... .++.+.++-+++.-
T Consensus 4 VVlVHG~~---~~~~-~~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T----- 73 (219)
T PF01674_consen 4 VVLVHGTG---GNAY-SNWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT----- 73 (219)
T ss_dssp EEEE--TT---TTTC-GGCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH-----
T ss_pred EEEECCCC---cchh-hCHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhh-----
Confidence 78999943 2222 2367888889888 999 899999755442222221 34555555554431
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 179 DSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 179 d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
.. +|=|+|||+||.++..+....
T Consensus 74 -Ga-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 74 -GA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -T---EEEEEETCHHHHHHHHHHHC
T ss_pred -CC-EEEEEEcCCcCHHHHHHHHHc
Confidence 23 799999999999998876643
No 169
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.17 E-value=0.11 Score=45.74 Aligned_cols=210 Identities=19% Similarity=0.122 Sum_probs=112.2
Q ss_pred CcccEEEEEcCCcccccCCCchh-hHHHHHHHHhhCCcEEEeeccCC----C---CC-CCCCchhhHHHHHHHHHHhccc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAI-YDILCRRLVGTCKAVVVSVNYRR----A---PE-NRYPCAYDDGWTVLKWAKSRSW 174 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~-~~~~~~~la~~~g~~vv~~dyr~----~---p~-~~~~~~~~D~~~a~~~l~~~~~ 174 (344)
++ |+||-.|.=|--..+.-... ...-.+.+..+ +.|+-+|-+. + |+ ++||.. +|+.+-+-.+.++
T Consensus 45 ~k-paiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~HV~~PGqe~gAp~~p~~y~yPsm-d~LAd~l~~VL~~-- 118 (326)
T KOG2931|consen 45 NK-PAIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVYHVDAPGQEDGAPSFPEGYPYPSM-DDLADMLPEVLDH-- 118 (326)
T ss_pred CC-ceEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEEecCCCccccCCccCCCCCCCCCH-HHHHHHHHHHHHh--
Confidence 55 99999999552211100000 01123455543 7777777652 2 22 245543 5555555555554
Q ss_pred ccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCCh--hhhh---------------------
Q 019193 175 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTE--SEKR--------------------- 231 (344)
Q Consensus 175 ~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~--~~~~--------------------- 231 (344)
..-+ .|+-+|--+|+++-+..|..+++ ++-|+||+++--....-.+ ..+.
T Consensus 119 ---f~lk-~vIg~GvGAGAyIL~rFAl~hp~---rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H 191 (326)
T KOG2931|consen 119 ---FGLK-SVIGMGVGAGAYILARFALNHPE---RVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAH 191 (326)
T ss_pred ---cCcc-eEEEecccccHHHHHHHHhcChh---heeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchhhhHHHHHHHH
Confidence 3345 89999999999999999999887 7999999986322111000 0000
Q ss_pred -hCC-----------------CCccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCcChHH
Q 019193 232 -LDG-----------------KYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW 293 (344)
Q Consensus 232 -~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~l~~~ 293 (344)
+.+ ....+......|+..|....+. ....... ...+ -.|+++++|+.-+.+++
T Consensus 192 ~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL-~~~r~~~----~~tl----kc~vllvvGd~Sp~~~~ 262 (326)
T KOG2931|consen 192 HFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDL-SIERPKL----GTTL----KCPVLLVVGDNSPHVSA 262 (326)
T ss_pred HhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCc-cccCCCc----Cccc----cccEEEEecCCCchhhh
Confidence 000 0111223334444444321110 0000000 0011 24899999999999998
Q ss_pred HHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 294 QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 294 ~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
......+|... .+.+....+.+-.-.. +...++.+.+.=|++
T Consensus 263 vv~~n~~Ldp~--~ttllk~~d~g~l~~e----~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 263 VVECNSKLDPT--YTTLLKMADCGGLVQE----EQPGKLAEAFKYFLQ 304 (326)
T ss_pred hhhhhcccCcc--cceEEEEcccCCcccc----cCchHHHHHHHHHHc
Confidence 88887777644 3567777766553321 233445555555554
No 170
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.16 E-value=0.012 Score=51.64 Aligned_cols=202 Identities=16% Similarity=0.172 Sum_probs=103.4
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHH-----HHHHHhhCCcEEEeeccCCCC--------CCCCCchhhHHHHHHHHHH
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDIL-----CRRLVGTCKAVVVSVNYRRAP--------ENRYPCAYDDGWTVLKWAK 170 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~-----~~~la~~~g~~vv~~dyr~~p--------~~~~~~~~~D~~~a~~~l~ 170 (344)
++ |+||-+|-=|-- ..+ -|..+ ...+.+ .+.++=+|-+... .+.||. +++..+.+..+.
T Consensus 22 ~k-p~ilT~HDvGlN---h~s-cF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p~~y~yPs-md~LAe~l~~Vl 93 (283)
T PF03096_consen 22 NK-PAILTYHDVGLN---HKS-CFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLPEGYQYPS-MDQLAEMLPEVL 93 (283)
T ss_dssp TS--EEEEE--TT-----HHH-HCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----TT------HHHHHCTHHHHH
T ss_pred CC-ceEEEecccccc---chH-HHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCcccccccccccC-HHHHHHHHHHHH
Confidence 56 999999984421 110 01222 334443 7889888877432 224443 234444444444
Q ss_pred hcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCCCCCh------------------hh---
Q 019193 171 SRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTE------------------SE--- 229 (344)
Q Consensus 171 ~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~~~~~------------------~~--- 229 (344)
++ ..-+ .++-+|--|||++-+.+|...++ ++.|+||++|......-.+ ..
T Consensus 94 ~~-----f~lk-~vIg~GvGAGAnIL~rfAl~~p~---~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~ 164 (283)
T PF03096_consen 94 DH-----FGLK-SVIGFGVGAGANILARFALKHPE---RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDY 164 (283)
T ss_dssp HH-----HT----EEEEEETHHHHHHHHHHHHSGG---GEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHH
T ss_pred Hh-----CCcc-EEEEEeeccchhhhhhccccCcc---ceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHh
Confidence 43 1223 89999999999999999999887 7999999998533211100 00
Q ss_pred ---------hhhCCC-----------CccCHHhHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcCCCCCCcEEEEEcCCCc
Q 019193 230 ---------KRLDGK-----------YFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDL 289 (344)
Q Consensus 230 ---------~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pP~li~~G~~D~ 289 (344)
....+. ...+......|+..|.... +-.. ..... ..|+|+++|+.-+
T Consensus 165 Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~----DL~~--------~~~~~-~c~vLlvvG~~Sp 231 (283)
T PF03096_consen 165 LLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRT----DLSI--------ERPSL-GCPVLLVVGDNSP 231 (283)
T ss_dssp HHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT---------S--------ECTTC-CS-EEEEEETTST
T ss_pred hhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccc----cchh--------hcCCC-CCCeEEEEecCCc
Confidence 000000 1122233444455443211 1000 00110 3589999999999
Q ss_pred ChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 290 IQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 290 l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
..++...+..+|.. ...++...++++=... .++..++.+.+.=||+
T Consensus 232 ~~~~vv~~ns~Ldp--~~ttllkv~dcGglV~----eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 232 HVDDVVEMNSKLDP--TKTTLLKVADCGGLVL----EEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp THHHHHHHHHHS-C--CCEEEEEETT-TT-HH----HH-HHHHHHHHHHHHH
T ss_pred chhhHHHHHhhcCc--ccceEEEecccCCccc----ccCcHHHHHHHHHHHc
Confidence 99999988888854 3578888888754221 2456667777777765
No 171
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.04 E-value=0.043 Score=46.94 Aligned_cols=106 Identities=19% Similarity=0.224 Sum_probs=68.0
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCC-----cEEEeeccCCCC-------CCCCC---chhhHHHHHHH
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK-----AVVVSVNYRRAP-------ENRYP---CAYDDGWTVLK 167 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g-----~~vv~~dyr~~p-------~~~~~---~~~~D~~~a~~ 167 (344)
... +.|+++-|-. .....|..++++|-..++ +++-..+.-+.| ++... ..-+++..=++
T Consensus 27 ~~~-~li~~IpGNP-----G~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKla 100 (301)
T KOG3975|consen 27 EDK-PLIVWIPGNP-----GLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLA 100 (301)
T ss_pred CCc-eEEEEecCCC-----CchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHH
Confidence 355 8999999932 223458889999887765 233333444444 22211 12255666777
Q ss_pred HHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 168 WAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 168 ~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
++.+. +..+.+|+++|||-|+++.+.+..... ....+..++++-|-+
T Consensus 101 Fik~~-----~Pk~~ki~iiGHSiGaYm~Lqil~~~k-~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 101 FIKEY-----VPKDRKIYIIGHSIGAYMVLQILPSIK-LVFSVQKAVLLFPTI 147 (301)
T ss_pred HHHHh-----CCCCCEEEEEecchhHHHHHHHhhhcc-cccceEEEEEecchH
Confidence 77776 333349999999999999998876532 234677777777753
No 172
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.99 E-value=0.024 Score=49.30 Aligned_cols=60 Identities=15% Similarity=0.119 Sum_probs=49.7
Q ss_pred CcEEEEEcCCCcChHH--HHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHH
Q 019193 278 PKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFV 340 (344)
Q Consensus 278 pP~li~~G~~D~l~~~--~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl 340 (344)
.|-+.+.++.|.+++. .+++++..++.|.+|+...+++.+|.-++..+ .++..+.+.+|+
T Consensus 179 ~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~---p~~Y~~~v~~fw 240 (240)
T PF05705_consen 179 CPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKH---PDRYWRAVDEFW 240 (240)
T ss_pred CCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccC---HHHHHHHHHhhC
Confidence 4799999999988764 58899999999999999999999998876543 567777777764
No 173
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.98 E-value=0.0042 Score=67.34 Aligned_cols=101 Identities=20% Similarity=0.157 Sum_probs=63.9
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC-CCCCchhhHHHHHHHHHHhcccccCCCCCCeEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE-NRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIY 185 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~-~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~ 185 (344)
|.++++||+|. +. ..|..+++.+.. ++.|+.++.+.... ...+..++++.+.+....... .... ++.
T Consensus 1069 ~~l~~lh~~~g---~~--~~~~~l~~~l~~--~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~----~~~~-p~~ 1136 (1296)
T PRK10252 1069 PTLFCFHPASG---FA--WQFSVLSRYLDP--QWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQ----QPHG-PYH 1136 (1296)
T ss_pred CCeEEecCCCC---ch--HHHHHHHHhcCC--CCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhh----CCCC-CEE
Confidence 66899999652 22 237777777754 68888888774321 112233444433322222221 1124 899
Q ss_pred EeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 186 LAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 186 l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
++|||+||.+|..++.+....+.++..++++.++
T Consensus 1137 l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1137 LLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 9999999999999999876555578888877754
No 174
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.89 E-value=0.0039 Score=52.28 Aligned_cols=60 Identities=20% Similarity=0.256 Sum_probs=46.4
Q ss_pred CcEEEeeccCCCCCC------------CCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 139 KAVVVSVNYRRAPEN------------RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 139 g~~vv~~dyr~~p~~------------~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
-+.|++|-||.+.-. .+..++.|+.+|+++..++. +.+.+++|+|||.|+.+...+....
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~-----n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY-----NNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc-----CCCCCEEEEEeChHHHHHHHHHHHH
Confidence 588999999943211 22345799999999999883 3333999999999999999887765
No 175
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.79 E-value=0.0085 Score=53.98 Aligned_cols=107 Identities=19% Similarity=0.159 Sum_probs=63.9
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCC--CC---CCCC-----CchhhHHHHHHHHHHhcc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR--AP---ENRY-----PCAYDDGWTVLKWAKSRS 173 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~--~p---~~~~-----~~~~~D~~~a~~~l~~~~ 173 (344)
.. -++||+||-.+.+ ... ..-..+++...|+-.+.+-+.- .. .+.+ ...-.+.+.+++++.+..
T Consensus 115 ~k-~vlvFvHGfNntf---~da--v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 115 AK-TVLVFVHGFNNTF---EDA--VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CC-eEEEEEcccCCch---hHH--HHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC
Confidence 44 7999999933211 111 1123455554454433333321 11 1111 223467788888888874
Q ss_pred cccCCCCCCeEEEeeCCchHHHHHHHHHHhcc-----cCCeeeEEEEeccccCC
Q 019193 174 WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-----SEVEILGNILLNPMFGG 222 (344)
Q Consensus 174 ~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~-----~~~~i~~~il~~p~~~~ 222 (344)
. .. +|.|++||||..+++....+..- .+.+|+-+|+-+|=.|.
T Consensus 189 ~-----~~-~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 189 P-----VK-RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred C-----Cc-eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 3 24 89999999999999987776522 23467888888886653
No 176
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.76 E-value=0.0037 Score=59.05 Aligned_cols=90 Identities=17% Similarity=0.109 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhCCcEEEeeccCCCCC-----CCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHH
Q 019193 126 IYDILCRRLVGTCKAVVVSVNYRRAPE-----NRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVA 200 (344)
Q Consensus 126 ~~~~~~~~la~~~g~~vv~~dyr~~p~-----~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a 200 (344)
.|..+...|.+. |+.+ ..|.+.+|- ......+++..+.++.+.+. .... ++.|+||||||.++..++
T Consensus 109 ~~~~li~~L~~~-GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~-----~g~~-kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 109 YFHDMIEQLIKW-GYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKA-----SGGK-KVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHc-CCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHH-----cCCC-CEEEEEECHhHHHHHHHH
Confidence 367788888876 8865 445443331 11223345666666555543 2235 899999999999999888
Q ss_pred HHhccc-CCeeeEEEEeccccCCC
Q 019193 201 LRAVES-EVEILGNILLNPMFGGQ 223 (344)
Q Consensus 201 ~~~~~~-~~~i~~~il~~p~~~~~ 223 (344)
...++. ...|+.+|++++.....
T Consensus 181 ~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 181 SLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHCCHhHHhHhccEEEECCCCCCC
Confidence 765431 23578888888665544
No 177
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.41 E-value=0.0095 Score=55.75 Aligned_cols=88 Identities=17% Similarity=0.205 Sum_probs=58.0
Q ss_pred hHHHHHHHHhhCCcE----EE-e-eccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHH
Q 019193 127 YDILCRRLVGTCKAV----VV-S-VNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVA 200 (344)
Q Consensus 127 ~~~~~~~la~~~g~~----vv-~-~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a 200 (344)
|..+...|.+. ||. ++ + .|.|++|. ........+...++.+.+. ... +|+|+||||||.++..+.
T Consensus 67 ~~~li~~L~~~-GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~------~~~-kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 67 FAKLIENLEKL-GYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKK------NGK-KVVLIAHSMGGLVARYFL 137 (389)
T ss_pred HHHHHHHHHhc-CcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHh------cCC-cEEEEEeCCCchHHHHHH
Confidence 77888888763 554 22 3 69999888 2222334444444444332 235 999999999999999887
Q ss_pred HHhccc---CCeeeEEEEeccccCCC
Q 019193 201 LRAVES---EVEILGNILLNPMFGGQ 223 (344)
Q Consensus 201 ~~~~~~---~~~i~~~il~~p~~~~~ 223 (344)
...... ...|++.|.+++...+.
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCCC
Confidence 776432 34689999888765443
No 178
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.34 E-value=0.18 Score=42.55 Aligned_cols=107 Identities=17% Similarity=0.107 Sum_probs=68.5
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC----CCCCchhhHHHHHHHHHHhcccccCCCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE----NRYPCAYDDGWTVLKWAKSRSWLQSKDSKA 182 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~----~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~ 182 (344)
--|||+-|=|= |-.....-..+.+.+-+. ++..|.+-.|-++. ....+..+|+..+++++.... ...
T Consensus 37 ~~vvfiGGLgd--gLl~~~y~~~L~~~lde~-~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~-----fSt- 107 (299)
T KOG4840|consen 37 VKVVFIGGLGD--GLLICLYTTMLNRYLDEN-SWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCG-----FST- 107 (299)
T ss_pred EEEEEEcccCC--CccccccHHHHHHHHhhc-cceeeeeeccccccccccccccccHHHHHHHHHHhhccC-----ccc-
Confidence 44666666221 112222124455555555 99999988775544 455677889999998776542 234
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCC
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 223 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~ 223 (344)
.|+|+|||.|..=.+.+.... ....++.+.|+.+|+-|-.
T Consensus 108 ~vVL~GhSTGcQdi~yYlTnt-~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTNT-TKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHhc-cchHHHHHHHHhCccchhh
Confidence 799999999998877766322 1122678888999987643
No 179
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.27 E-value=0.037 Score=52.17 Aligned_cols=44 Identities=25% Similarity=0.391 Sum_probs=34.7
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHHhcc-------cCCeeeEEEEeccccCC
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGG 222 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~~~~-------~~~~i~~~il~~p~~~~ 222 (344)
.... +++|+|+|.||+.+-.+|....+ ....++|+++.+|+++.
T Consensus 133 ~~~~-~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 133 YRSN-PLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp GTTS-EEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred ccCC-CEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 4556 99999999999999888877522 14789999999998764
No 180
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.22 E-value=0.011 Score=58.13 Aligned_cols=60 Identities=17% Similarity=0.055 Sum_probs=38.9
Q ss_pred CchhhHHHHHHHHHHhcccc-cCCC---CCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEe
Q 019193 156 PCAYDDGWTVLKWAKSRSWL-QSKD---SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL 216 (344)
Q Consensus 156 ~~~~~D~~~a~~~l~~~~~~-~~~d---~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~ 216 (344)
.++.+=+.+|++++.+.-.. ...+ |. .|+|+||||||.+|.+++.........+.-++..
T Consensus 153 ~dQtEYV~dAIk~ILslYr~~~e~~~p~P~-sVILVGHSMGGiVAra~~tlkn~~~~sVntIITl 216 (973)
T KOG3724|consen 153 LDQTEYVNDAIKYILSLYRGEREYASPLPH-SVILVGHSMGGIVARATLTLKNEVQGSVNTIITL 216 (973)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCCCCc-eEEEEeccchhHHHHHHHhhhhhccchhhhhhhh
Confidence 34556677788888865432 1133 67 7999999999999988776643322234444433
No 181
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=96.21 E-value=0.016 Score=51.72 Aligned_cols=77 Identities=19% Similarity=0.094 Sum_probs=58.1
Q ss_pred hCCcEEEeeccCCC---CCCCCCchh-hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeE
Q 019193 137 TCKAVVVSVNYRRA---PENRYPCAY-DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILG 212 (344)
Q Consensus 137 ~~g~~vv~~dyr~~---p~~~~~~~~-~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~ 212 (344)
++||.|+..+.+.. ...|+|..- +-+.+++++..++- +..+. .|+|.|+|-||.-++.+|..+++ +++
T Consensus 266 ~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~L---gf~~e-dIilygWSIGGF~~~waAs~YPd----Vka 337 (517)
T KOG1553|consen 266 QLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVL---GFRQE-DIILYGWSIGGFPVAWAASNYPD----VKA 337 (517)
T ss_pred HhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHc---CCCcc-ceEEEEeecCCchHHHHhhcCCC----ceE
Confidence 34999999998854 445666543 44455677777663 36777 99999999999999999988876 889
Q ss_pred EEEeccccC
Q 019193 213 NILLNPMFG 221 (344)
Q Consensus 213 ~il~~p~~~ 221 (344)
+|+-..+-|
T Consensus 338 vvLDAtFDD 346 (517)
T KOG1553|consen 338 VVLDATFDD 346 (517)
T ss_pred EEeecchhh
Confidence 988776543
No 182
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.99 E-value=0.022 Score=44.80 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=27.4
Q ss_pred CCCeEEEeeCCchHHHHHHHHHHhcccC----CeeeEEEEecccc
Q 019193 180 SKAHIYLAGDSSGGNIVHHVALRAVESE----VEILGNILLNPMF 220 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~----~~i~~~il~~p~~ 220 (344)
.. +|++.|||.||.+|..++....... ..+.....-+|.+
T Consensus 63 ~~-~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 63 DY-SIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp TS-EEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred Cc-cchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 35 8999999999999999988864432 3455555555543
No 183
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.94 E-value=0.015 Score=49.91 Aligned_cols=52 Identities=23% Similarity=0.293 Sum_probs=36.0
Q ss_pred HHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhccc-CCeeeEEEEecc
Q 019193 163 WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES-EVEILGNILLNP 218 (344)
Q Consensus 163 ~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~-~~~i~~~il~~p 218 (344)
..|++|+.+... -.++ +|.|.|||-||+||...+....+. ..+|..++.+.+
T Consensus 69 ~~A~~yl~~~~~---~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 69 KSALAYLKKIAK---KYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHH---hCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 456666665543 2335 799999999999999988875432 236777775543
No 184
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.90 E-value=0.029 Score=45.00 Aligned_cols=40 Identities=18% Similarity=0.198 Sum_probs=28.4
Q ss_pred CCCCeEEEeeCCchHHHHHHHHHHhccc-CCeeeEEEEeccc
Q 019193 179 DSKAHIYLAGDSSGGNIVHHVALRAVES-EVEILGNILLNPM 219 (344)
Q Consensus 179 d~~~~i~l~G~SaGG~lA~~~a~~~~~~-~~~i~~~il~~p~ 219 (344)
... +|.+.|||+||.+|..++...... ......++.+.|.
T Consensus 26 p~~-~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 26 PDY-KIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred CCC-eEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 345 999999999999999998887542 1234445555543
No 185
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.84 E-value=0.042 Score=45.48 Aligned_cols=84 Identities=18% Similarity=0.158 Sum_probs=46.1
Q ss_pred HHHHHHHhhCC---cEEEeeccCCCCCC-CCC----chhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHH
Q 019193 129 ILCRRLVGTCK---AVVVSVNYRRAPEN-RYP----CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVA 200 (344)
Q Consensus 129 ~~~~~la~~~g---~~vv~~dyr~~p~~-~~~----~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a 200 (344)
.+...+.++.| +.+..++|+-.... .|. ...+++...++..... .... +|+|+|.|.|+.++..++
T Consensus 26 ~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~-----CP~~-kivl~GYSQGA~V~~~~~ 99 (179)
T PF01083_consen 26 PFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAAR-----CPNT-KIVLAGYSQGAMVVGDAL 99 (179)
T ss_dssp HHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHH-----STTS-EEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHh-----CCCC-CEEEEecccccHHHHHHH
Confidence 34445555444 55666778854333 232 2334444444443333 3335 999999999999999887
Q ss_pred HH--h-cccCCeeeEEEEecc
Q 019193 201 LR--A-VESEVEILGNILLNP 218 (344)
Q Consensus 201 ~~--~-~~~~~~i~~~il~~p 218 (344)
.. . .....+|.+++++.-
T Consensus 100 ~~~~l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 100 SGDGLPPDVADRIAAVVLFGD 120 (179)
T ss_dssp HHTTSSHHHHHHEEEEEEES-
T ss_pred HhccCChhhhhhEEEEEEecC
Confidence 66 1 111237889888763
No 186
>PLN02209 serine carboxypeptidase
Probab=95.82 E-value=0.29 Score=46.48 Aligned_cols=46 Identities=26% Similarity=0.317 Sum_probs=35.3
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHHhcc-------cCCeeeEEEEeccccCCCC
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQE 224 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~~~~-------~~~~i~~~il~~p~~~~~~ 224 (344)
.... +++|+|+|.||+-+-.+|....+ ....++|+++..|+++...
T Consensus 164 ~~~~-~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~ 216 (437)
T PLN02209 164 FLSN-PFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEF 216 (437)
T ss_pred ccCC-CEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhh
Confidence 4446 89999999999988887776532 1367899999999887543
No 187
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=95.78 E-value=0.06 Score=48.89 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=44.9
Q ss_pred CcEEEeeccCCC-----------CC-----CCCC-chhhHHHHHHHHHHhcccccCCCCCCeEE-EeeCCchHHHHHHHH
Q 019193 139 KAVVVSVNYRRA-----------PE-----NRYP-CAYDDGWTVLKWAKSRSWLQSKDSKAHIY-LAGDSSGGNIVHHVA 200 (344)
Q Consensus 139 g~~vv~~dyr~~-----------p~-----~~~~-~~~~D~~~a~~~l~~~~~~~~~d~~~~i~-l~G~SaGG~lA~~~a 200 (344)
.+-|++.|--.+ |+ ..|| --++|...+-+.+.+.- ||. ++. |+|.||||..|+.++
T Consensus 92 r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L---GI~---~l~avvGgSmGGMqaleWa 165 (368)
T COG2021 92 RFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDAL---GIK---KLAAVVGGSMGGMQALEWA 165 (368)
T ss_pred ceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhc---Ccc---eEeeeeccChHHHHHHHHH
Confidence 688898886533 22 2445 34578888877777762 354 666 999999999999999
Q ss_pred HHhcc
Q 019193 201 LRAVE 205 (344)
Q Consensus 201 ~~~~~ 205 (344)
..+++
T Consensus 166 ~~yPd 170 (368)
T COG2021 166 IRYPD 170 (368)
T ss_pred HhChH
Confidence 99877
No 188
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.70 E-value=0.034 Score=50.93 Aligned_cols=101 Identities=15% Similarity=0.045 Sum_probs=59.6
Q ss_pred EEEEEcCCcccccCCCchhhHHHHHHHHhhCCcE---EEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeE
Q 019193 108 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV---VVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHI 184 (344)
Q Consensus 108 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~---vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i 184 (344)
.++++||++...+. +..+...+... |+. +..+++... ...............++.+.... -... ++
T Consensus 61 pivlVhG~~~~~~~-----~~~~~~~~~~~-g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~--~ga~-~v 129 (336)
T COG1075 61 PIVLVHGLGGGYGN-----FLPLDYRLAIL-GWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAK--TGAK-KV 129 (336)
T ss_pred eEEEEccCcCCcch-----hhhhhhhhcch-HHHhccccccccccc--CCCccccccHHHHHHHHHHHHhh--cCCC-ce
Confidence 58999996543222 34444444444 666 777777633 11112223334444444443221 1225 89
Q ss_pred EEeeCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 185 YLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
.+.|||+||-....+....+.. .+++.++.+.+.-
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~-~~V~~~~tl~tp~ 164 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGA-NRVASVVTLGTPH 164 (336)
T ss_pred EEEeecccchhhHHHHhhcCcc-ceEEEEEEeccCC
Confidence 9999999999999777665422 3688888877653
No 189
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.50 E-value=0.041 Score=47.44 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=28.8
Q ss_pred eEEEeeCCchHHHHHHHHHHhccc--CCeeeEEEEecccc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVES--EVEILGNILLNPMF 220 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~--~~~i~~~il~~p~~ 220 (344)
+|++.|||+||.+|..++...... ...+.++..-+|-+
T Consensus 129 ~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 129 KIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred eEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 899999999999999988876543 34566666666654
No 190
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.19 E-value=0.1 Score=49.31 Aligned_cols=66 Identities=23% Similarity=0.285 Sum_probs=46.4
Q ss_pred CchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCC
Q 019193 156 PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 222 (344)
Q Consensus 156 ~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~ 222 (344)
..+-+|+..+.+.+.+.-..+.-..+ +.+|+|.|.||+-+..+|....+....+.+++++++++..
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~r~~~-~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlig 238 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYARLLS-PKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIG 238 (498)
T ss_pred hccchhHHHHHHHHHHHHHHHhhhcC-ceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeec
Confidence 34558888888877765433333446 8999999999999999988775543445666666665443
No 191
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.10 E-value=0.25 Score=42.89 Aligned_cols=101 Identities=17% Similarity=0.100 Sum_probs=66.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCC-chhhHHHHHHHHHHhcccccCCCCCCeEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-CAYDDGWTVLKWAKSRSWLQSKDSKAHIY 185 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~-~~~~D~~~a~~~l~~~~~~~~~d~~~~i~ 185 (344)
| +|.+||=| .+........+.+.+.+..|..|.+.+--..-+..+- ...+++..+.+.+..... . +. -+.
T Consensus 25 P-~ii~HGig---d~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m~~---l-sq-Gyn 95 (296)
T KOG2541|consen 25 P-VIVWHGIG---DSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQMPE---L-SQ-GYN 95 (296)
T ss_pred C-EEEEeccC---cccccchHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcchh---c-cC-ceE
Confidence 6 46689933 1222233566777777777999999886654333333 333555566666664433 2 24 699
Q ss_pred EeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 186 LAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 186 l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
++|.|.||-++-+++...+. +++.-.|.+++
T Consensus 96 ivg~SQGglv~Raliq~cd~--ppV~n~ISL~g 126 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDN--PPVKNFISLGG 126 (296)
T ss_pred EEEEccccHHHHHHHHhCCC--CCcceeEeccC
Confidence 99999999999999998865 46666666653
No 192
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.97 E-value=0.63 Score=43.95 Aligned_cols=102 Identities=13% Similarity=0.079 Sum_probs=63.6
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEee-ccCCCCCCCCCchhhHHHHHHHHHHh-cccccCCCCCCeE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSV-NYRRAPENRYPCAYDDGWTVLKWAKS-RSWLQSKDSKAHI 184 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~-dyr~~p~~~~~~~~~D~~~a~~~l~~-~~~~~~~d~~~~i 184 (344)
|..|||-| |.. -+.+..+ .+-+++|+-.+.+ |-|+... .|....++..+.+.-+.+ .-..++.+.+ .+
T Consensus 290 PL~VYFSG--yR~----aEGFEgy--~MMk~Lg~PfLL~~DpRleGG-aFYlGs~eyE~~I~~~I~~~L~~LgF~~~-qL 359 (511)
T TIGR03712 290 PLNVYFSG--YRP----AEGFEGY--FMMKRLGAPFLLIGDPRLEGG-AFYLGSDEYEQGIINVIQEKLDYLGFDHD-QL 359 (511)
T ss_pred CeEEeecc--Ccc----cCcchhH--HHHHhcCCCeEEeeccccccc-eeeeCcHHHHHHHHHHHHHHHHHhCCCHH-He
Confidence 88999998 221 1113332 3445667776655 5555433 344444444433333332 2334568888 99
Q ss_pred EEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccccCCC
Q 019193 185 YLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 223 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~~~~ 223 (344)
+|.|-|||-.-|+..+... .+.++|+-=|.+++-
T Consensus 360 ILSGlSMGTfgAlYYga~l-----~P~AIiVgKPL~NLG 393 (511)
T TIGR03712 360 ILSGLSMGTFGALYYGAKL-----SPHAIIVGKPLVNLG 393 (511)
T ss_pred eeccccccchhhhhhcccC-----CCceEEEcCcccchh
Confidence 9999999999999988765 467788777876643
No 193
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=94.89 E-value=0.2 Score=41.74 Aligned_cols=85 Identities=22% Similarity=0.242 Sum_probs=53.3
Q ss_pred hHHHHHHHHhhCCcEEEeeccCCCC-CCCCCchhhHHHH-HHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhc
Q 019193 127 YDILCRRLVGTCKAVVVSVNYRRAP-ENRYPCAYDDGWT-VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 204 (344)
Q Consensus 127 ~~~~~~~la~~~g~~vv~~dyr~~p-~~~~~~~~~D~~~-a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~ 204 (344)
|..+...+.. .+.|+.++++... ....+..+++... ..+.+.+. .... ++.++|||+||.++..++.+..
T Consensus 15 ~~~~~~~l~~--~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~-~~~l~g~s~Gg~~a~~~a~~l~ 86 (212)
T smart00824 15 YARLAAALRG--RRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA-----AGGR-PFVLVGHSSGGLLAHAVAARLE 86 (212)
T ss_pred HHHHHHhcCC--CccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----cCCC-CeEEEEECHHHHHHHHHHHHHH
Confidence 6667766654 5778888876432 2233334444333 22333322 2234 8999999999999999998876
Q ss_pred ccCCeeeEEEEeccc
Q 019193 205 ESEVEILGNILLNPM 219 (344)
Q Consensus 205 ~~~~~i~~~il~~p~ 219 (344)
..+..+.+++++.+.
T Consensus 87 ~~~~~~~~l~~~~~~ 101 (212)
T smart00824 87 ARGIPPAAVVLLDTY 101 (212)
T ss_pred hCCCCCcEEEEEccC
Confidence 555567778776543
No 194
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.72 E-value=0.21 Score=47.36 Aligned_cols=46 Identities=26% Similarity=0.313 Sum_probs=35.6
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHHhcc-------cCCeeeEEEEeccccCCCC
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQE 224 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~~~~-------~~~~i~~~il~~p~~~~~~ 224 (344)
...+ +++|.|+|.||+.+-.+|.+..+ ....++|+++-.|+++...
T Consensus 162 ~~~~-~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~ 214 (433)
T PLN03016 162 YFSN-PLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDF 214 (433)
T ss_pred hcCC-CEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchh
Confidence 3446 89999999999988888776532 2357899999999887643
No 195
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=94.55 E-value=0.079 Score=46.84 Aligned_cols=64 Identities=16% Similarity=0.158 Sum_probs=47.4
Q ss_pred CcEEEEEcCCCcChHH--HHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhccC
Q 019193 278 PKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 344 (344)
Q Consensus 278 pP~li~~G~~D~l~~~--~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~l 344 (344)
.|++++||..|..++. +..+.++.+.. +.+...++++.|..... ..+...+.++++.+|+.++|
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYD-NPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccC-ccHHHHHHHHHHHHHHHHhc
Confidence 4899999999988764 34444444443 77889999999976532 23455689999999999875
No 196
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.18 E-value=0.075 Score=48.79 Aligned_cols=74 Identities=20% Similarity=0.132 Sum_probs=56.9
Q ss_pred HHHHHHHHhhCCcEEEeeccCCCCCC-C----------------CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCC
Q 019193 128 DILCRRLVGTCKAVVVSVNYRRAPEN-R----------------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDS 190 (344)
Q Consensus 128 ~~~~~~la~~~g~~vv~~dyr~~p~~-~----------------~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~S 190 (344)
..+...+|.+.+..+|-+++|.-.+. | ..+++.|-...+.+++.+.. -... +|+.+|.|
T Consensus 100 tGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~---a~~~-pvIafGGS 175 (492)
T KOG2183|consen 100 TGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLS---AEAS-PVIAFGGS 175 (492)
T ss_pred cchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccc---cccC-cEEEecCc
Confidence 34677888888999999999954332 1 23567888889999988733 4456 99999999
Q ss_pred chHHHHHHHHHHhcc
Q 019193 191 SGGNIVHHVALRAVE 205 (344)
Q Consensus 191 aGG~lA~~~a~~~~~ 205 (344)
.||.||+.+=++++.
T Consensus 176 YGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 176 YGGMLAAWFRLKYPH 190 (492)
T ss_pred hhhHHHHHHHhcChh
Confidence 999999988777654
No 197
>PLN02606 palmitoyl-protein thioesterase
Probab=93.94 E-value=0.74 Score=41.05 Aligned_cols=103 Identities=12% Similarity=0.059 Sum_probs=60.0
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCC-CchhhHHHHHHHHHHhcccccCCCCCCeEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-PCAYDDGWTVLKWAKSRSWLQSKDSKAHIY 185 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~-~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~ 185 (344)
| ||.+||=|=.-++. ....+...+.+..|.-+.++.--..-+..+ -...+++..+.+-+.+... .. + -+-
T Consensus 28 P-vViwHGlgD~~~~~---~~~~~~~~i~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~~~~~---L~-~-G~n 98 (306)
T PLN02606 28 P-FVLFHGFGGECSNG---KVSNLTQFLINHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIKQMKE---LS-E-GYN 98 (306)
T ss_pred C-EEEECCCCcccCCc---hHHHHHHHHHhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHhcchh---hc-C-ceE
Confidence 6 56789944111121 234454444322255444443111222344 4445666777777766433 22 4 589
Q ss_pred EeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 186 LAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 186 l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
++|+|.||.++-.+..+.+. .++++-+|.+.+-
T Consensus 99 aIGfSQGglflRa~ierc~~-~p~V~nlISlggp 131 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDN-APPVINYVSLGGP 131 (306)
T ss_pred EEEEcchhHHHHHHHHHCCC-CCCcceEEEecCC
Confidence 99999999999999999865 2467778877754
No 198
>PLN02454 triacylglycerol lipase
Probab=93.93 E-value=0.16 Score=47.28 Aligned_cols=59 Identities=20% Similarity=0.245 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccC-----CeeeEEEEeccccC
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE-----VEILGNILLNPMFG 221 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~-----~~i~~~il~~p~~~ 221 (344)
.+++.+.++-+.+... -..- +|+|.|||+||.||+..|......+ .++..+..-+|-+.
T Consensus 209 r~qvl~~V~~l~~~Yp---~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 209 RSQLLAKIKELLERYK---DEKL-SIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHHhCC---CCCc-eEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 3455555655555421 1222 5999999999999999887654322 24555555566543
No 199
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.81 E-value=0.9 Score=43.13 Aligned_cols=62 Identities=21% Similarity=0.354 Sum_probs=44.2
Q ss_pred hHHH-HHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcc-------cCCeeeEEEEeccccCCCCC
Q 019193 160 DDGW-TVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQER 225 (344)
Q Consensus 160 ~D~~-~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~-------~~~~i~~~il~~p~~~~~~~ 225 (344)
+|.. ...+|+.+.++ ...+ .++|.|+|.+|+..=.+|...-+ ....++|+++-.|+++....
T Consensus 149 ~d~~~FL~~wf~kfPe---y~~~-~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~ 218 (454)
T KOG1282|consen 149 KDNYEFLQKWFEKFPE---YKSN-DFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEID 218 (454)
T ss_pred HHHHHHHHHHHHhChh---hcCC-CeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCcccc
Confidence 4443 34467766665 4556 89999999999888777776522 23578999999998875543
No 200
>PLN02633 palmitoyl protein thioesterase family protein
Probab=92.79 E-value=1.3 Score=39.66 Aligned_cols=105 Identities=13% Similarity=0.065 Sum_probs=63.0
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCc-hhhHHHHHHHHHHhcccccCCCCCC
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-AYDDGWTVLKWAKSRSWLQSKDSKA 182 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~-~~~D~~~a~~~l~~~~~~~~~d~~~ 182 (344)
+. | +|..||=|=.-.+. ....+...+.+..|.-+.++.--...+..|-. ..+++..+.+.+.+... .. +
T Consensus 25 ~~-P-~ViwHG~GD~c~~~---g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~~~~---l~-~- 94 (314)
T PLN02633 25 SV-P-FIMLHGIGTQCSDA---TNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQMKE---LS-Q- 94 (314)
T ss_pred CC-C-eEEecCCCcccCCc---hHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhhchh---hh-C-
Confidence 44 6 46679954221121 23444444433346777766544444444433 33555666666665333 22 4
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
-+-++|+|.||.++-.+..+.++ .++++-+|.+++-
T Consensus 95 G~naIGfSQGGlflRa~ierc~~-~p~V~nlISlggp 130 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDG-GPPVYNYISLAGP 130 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCC-CCCcceEEEecCC
Confidence 59999999999999999999865 2467777877643
No 201
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=92.76 E-value=0.54 Score=34.92 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=38.9
Q ss_pred CCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHh
Q 019193 277 FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 277 ~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~ 341 (344)
.+|+|++.++.|+..+.. .++++.+.=...+++.++|.+|+.... ..+. +.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~--~a~~~~~~l~~s~lvt~~g~gHg~~~~-~s~C---~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYE--GARAMAARLPGSRLVTVDGAGHGVYAG-GSPC---VDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHH--HHHHHHHHCCCceEEEEeccCcceecC-CChH---HHHHHHHHHH
Confidence 479999999999997643 223333322236999999999998642 2233 4445556665
No 202
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=91.91 E-value=1.2 Score=39.38 Aligned_cols=106 Identities=17% Similarity=0.152 Sum_probs=47.6
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhh-CCcEEEeeccCCCC----CCCC-CchhhHHHHHHHHHHhccccc
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGT-CKAVVVSVNYRRAP----ENRY-PCAYDDGWTVLKWAKSRSWLQ 176 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~-~g~~vv~~dyr~~p----~~~~-~~~~~D~~~a~~~l~~~~~~~ 176 (344)
.++ | ||..||=|=.-++... ...+...+-+. -|.-|.+++---.+ +.++ -..-+.+..+.+-+.+...
T Consensus 4 ~~~-P-vViwHGmGD~~~~~~~--m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~-- 77 (279)
T PF02089_consen 4 SPL-P-VVIWHGMGDSCCNPSS--MGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPE-- 77 (279)
T ss_dssp SS----EEEE--TT--S--TTT--HHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG--
T ss_pred CCC-c-EEEEEcCccccCChhH--HHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChh--
Confidence 355 6 5667994421111111 22332222222 27777777643221 1122 1122333334444444433
Q ss_pred CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 177 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 177 ~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
+. + -+-++|+|.||.+.-.++.+... +++.-+|.+++-
T Consensus 78 -L~-~-G~~~IGfSQGgl~lRa~vq~c~~--~~V~nlISlggp 115 (279)
T PF02089_consen 78 -LA-N-GFNAIGFSQGGLFLRAYVQRCND--PPVHNLISLGGP 115 (279)
T ss_dssp -GT-T--EEEEEETCHHHHHHHHHHH-TS--S-EEEEEEES--
T ss_pred -hh-c-ceeeeeeccccHHHHHHHHHCCC--CCceeEEEecCc
Confidence 22 3 69999999999999999999864 478888888754
No 203
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.75 E-value=1.3 Score=42.70 Aligned_cols=118 Identities=23% Similarity=0.242 Sum_probs=73.9
Q ss_pred CeEEEEeecCCCCCCCCccccccCCCCCCCcccEEEEEcCCcccccCCCchh-hHHHHHHHHhhCCcEEEeeccCCCCCC
Q 019193 75 NLLCRIYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAI-YDILCRRLVGTCKAVVVSVNYRRAPEN 153 (344)
Q Consensus 75 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGGg~~~g~~~~~~-~~~~~~~la~~~g~~vv~~dyr~~p~~ 153 (344)
.+.+.+++|.+- . .-++.+=||||. |...... ...+...+ .+ ||++++-|--.....
T Consensus 16 ~i~fev~LP~~W----------------N---gR~~~~GgGG~~-G~i~~~~~~~~~~~~~-~~-G~A~~~TD~Gh~~~~ 73 (474)
T PF07519_consen 16 NIRFEVWLPDNW----------------N---GRFLQVGGGGFA-GGINYADGKASMATAL-AR-GYATASTDSGHQGSA 73 (474)
T ss_pred eEEEEEECChhh----------------c---cCeEEECCCeee-Ccccccccccccchhh-hc-CeEEEEecCCCCCCc
Confidence 588889999855 2 236777778875 3433211 01122222 23 999999885432221
Q ss_pred -----CC---Cch--------hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEec
Q 019193 154 -----RY---PCA--------YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLN 217 (344)
Q Consensus 154 -----~~---~~~--------~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~ 217 (344)
.+ +.. +.+...+-+.+.+. .|+..++ +-+..|-|-||.-++..|+++++ -..|++.-+
T Consensus 74 ~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~--~Yg~~p~-~sY~~GcS~GGRqgl~~AQryP~---dfDGIlAga 147 (474)
T PF07519_consen 74 GSDDASFGNNPEALLDFAYRALHETTVVAKALIEA--FYGKAPK-YSYFSGCSTGGRQGLMAAQRYPE---DFDGILAGA 147 (474)
T ss_pred ccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHH--HhCCCCC-ceEEEEeCCCcchHHHHHHhChh---hcCeEEeCC
Confidence 11 111 22222333333333 4567888 99999999999999999999987 588888888
Q ss_pred ccc
Q 019193 218 PMF 220 (344)
Q Consensus 218 p~~ 220 (344)
|.+
T Consensus 148 PA~ 150 (474)
T PF07519_consen 148 PAI 150 (474)
T ss_pred chH
Confidence 854
No 204
>PLN00413 triacylglycerol lipase
Probab=91.75 E-value=0.32 Score=45.92 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 161 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 161 D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
++...++-+.+. .... +|+|.|||.||.+|...+...
T Consensus 269 ~i~~~Lk~ll~~-----~p~~-kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 269 TILRHLKEIFDQ-----NPTS-KFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred HHHHHHHHHHHH-----CCCC-eEEEEecCHHHHHHHHHHHHH
Confidence 444555554443 2334 899999999999999887643
No 205
>PLN02408 phospholipase A1
Probab=91.07 E-value=0.42 Score=43.92 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=20.2
Q ss_pred eEEEeeCCchHHHHHHHHHHhcc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVE 205 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~ 205 (344)
+|.|.|||.||.||...|.....
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHH
Confidence 79999999999999998877644
No 206
>PLN02571 triacylglycerol lipase
Probab=90.61 E-value=0.73 Score=43.01 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+++.+.++-+.+... -..- +|+|.|||+||.||...|...
T Consensus 208 ~qvl~eV~~L~~~y~---~e~~-sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYK---DEEI-SITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcC---cccc-cEEEeccchHHHHHHHHHHHH
Confidence 445555555444321 1122 699999999999999888765
No 207
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=90.52 E-value=0.84 Score=42.05 Aligned_cols=78 Identities=23% Similarity=0.330 Sum_probs=53.1
Q ss_pred EEEEEcC-CcccccCCCchhhHHHHHHHHhhCCcEEEeec-cCCCCCCCCCch-hhHHHHHHHHHHhcccccCCCCCCeE
Q 019193 108 VIIFFHG-GSFAHSSANSAIYDILCRRLVGTCKAVVVSVN-YRRAPENRYPCA-YDDGWTVLKWAKSRSWLQSKDSKAHI 184 (344)
Q Consensus 108 ~vv~~HG-Gg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d-yr~~p~~~~~~~-~~D~~~a~~~l~~~~~~~~~d~~~~i 184 (344)
+-||+-| |||.- . -......|.++ |+-||-+| .|..-..+-|.+ .+|....+++-..+ -... ++
T Consensus 262 ~av~~SGDGGWr~--l----Dk~v~~~l~~~-gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~-----w~~~-~~ 328 (456)
T COG3946 262 VAVFYSGDGGWRD--L----DKEVAEALQKQ-GVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARR-----WGAK-RV 328 (456)
T ss_pred EEEEEecCCchhh--h----hHHHHHHHHHC-CCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHh-----hCcc-eE
Confidence 3455666 77742 2 24567777777 99999998 344444444544 47888888887765 2345 99
Q ss_pred EEeeCCchHHHHHH
Q 019193 185 YLAGDSSGGNIVHH 198 (344)
Q Consensus 185 ~l~G~SaGG~lA~~ 198 (344)
.|+|.|.|+-+-=.
T Consensus 329 ~liGySfGADvlP~ 342 (456)
T COG3946 329 LLIGYSFGADVLPF 342 (456)
T ss_pred EEEeecccchhhHH
Confidence 99999999976543
No 208
>PLN02934 triacylglycerol lipase
Probab=90.48 E-value=0.47 Score=45.19 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
...+...++-+.+. .... +|++.|||.||.+|...+...
T Consensus 304 y~~v~~~lk~ll~~-----~p~~-kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 304 YYAVRSKLKSLLKE-----HKNA-KFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred HHHHHHHHHHHHHH-----CCCC-eEEEeccccHHHHHHHHHHHH
Confidence 34455555555544 2234 899999999999999887543
No 209
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=90.27 E-value=0.84 Score=44.44 Aligned_cols=87 Identities=11% Similarity=0.079 Sum_probs=53.1
Q ss_pred hHHHHHHHHhhCCcE-----EEeeccCCCCCCC--CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHH
Q 019193 127 YDILCRRLVGTCKAV-----VVSVNYRRAPENR--YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHV 199 (344)
Q Consensus 127 ~~~~~~~la~~~g~~-----vv~~dyr~~p~~~--~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~ 199 (344)
|..+...|+.- ||. ....|+|+++... ...-+..+...++.+.+.. ... +|+|+||||||.+++.+
T Consensus 158 w~kLIe~L~~i-GY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n-----ggk-KVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARI-GYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN-----GGK-KVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHc-CCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc-----CCC-eEEEEEeCCchHHHHHH
Confidence 36777888865 654 5566888885432 1233344555555444321 124 89999999999999987
Q ss_pred HHHhcc------------cCCeeeEEEEecccc
Q 019193 200 ALRAVE------------SEVEILGNILLNPMF 220 (344)
Q Consensus 200 a~~~~~------------~~~~i~~~il~~p~~ 220 (344)
...... ....|+..|.++|.+
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 653210 012467777777644
No 210
>PLN02162 triacylglycerol lipase
Probab=89.90 E-value=0.62 Score=43.99 Aligned_cols=21 Identities=24% Similarity=0.313 Sum_probs=18.4
Q ss_pred eEEEeeCCchHHHHHHHHHHh
Q 019193 183 HIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~ 203 (344)
++++.|||.||.+|...+...
T Consensus 279 kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 279 KYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred eEEEEecChHHHHHHHHHHHH
Confidence 899999999999999876543
No 211
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.63 E-value=1.2 Score=38.21 Aligned_cols=62 Identities=21% Similarity=0.214 Sum_probs=41.2
Q ss_pred CcEEEeeccCCC-------CCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhc
Q 019193 139 KAVVVSVNYRRA-------PENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 204 (344)
Q Consensus 139 g~~vv~~dyr~~-------p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~ 204 (344)
|+.+..++|.-+ +..++...+.+..+.+........ -..+ +++|+|.|+|+.+|.....+..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~---~~~~-~vvV~GySQGA~Va~~~~~~l~ 70 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAI---AAGG-PVVVFGYSQGAVVASNVLRRLA 70 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhc---cCCC-CEEEEEECHHHHHHHHHHHHHH
Confidence 677788888741 234455555555555555444321 1345 9999999999999998877763
No 212
>PLN02802 triacylglycerol lipase
Probab=89.49 E-value=0.94 Score=43.25 Aligned_cols=23 Identities=26% Similarity=0.267 Sum_probs=20.1
Q ss_pred eEEEeeCCchHHHHHHHHHHhcc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVE 205 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~ 205 (344)
+|+|.|||.||.||...+.....
T Consensus 331 sI~VTGHSLGGALAtLaA~dL~~ 353 (509)
T PLN02802 331 SITVTGHSLGAALALLVADELAT 353 (509)
T ss_pred eEEEeccchHHHHHHHHHHHHHH
Confidence 79999999999999988876644
No 213
>PF03283 PAE: Pectinacetylesterase
Probab=89.21 E-value=1 Score=41.58 Aligned_cols=60 Identities=20% Similarity=0.069 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhccc---CCeeeEEEEeccccCC
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES---EVEILGNILLNPMFGG 222 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~---~~~i~~~il~~p~~~~ 222 (344)
..-+.++++|+.+++- -+++ +|+|.|.||||.-++..+....+. ..++.++.-...+++.
T Consensus 137 ~~i~~avl~~l~~~gl---~~a~-~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGL---PNAK-QVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred HHHHHHHHHHHHHhcC---cccc-eEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccc
Confidence 4677889999998832 4567 999999999999888766655331 2355554444444443
No 214
>PLN02753 triacylglycerol lipase
Probab=89.16 E-value=0.7 Score=44.24 Aligned_cols=21 Identities=29% Similarity=0.373 Sum_probs=19.1
Q ss_pred eEEEeeCCchHHHHHHHHHHh
Q 019193 183 HIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+|.|.|||.||.||+..|...
T Consensus 313 sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 313 SITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred eEEEEccCHHHHHHHHHHHHH
Confidence 899999999999999888654
No 215
>PLN02719 triacylglycerol lipase
Probab=88.97 E-value=0.72 Score=44.02 Aligned_cols=44 Identities=20% Similarity=0.168 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhc
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 204 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~ 204 (344)
+++.+.++-+.+.......... +|.|.|||.||.||...|....
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~-sItVTGHSLGGALAtLaA~Dl~ 320 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEEL-SITVTGHSLGGALAVLSAYDVA 320 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcc-eEEEecCcHHHHHHHHHHHHHH
Confidence 4455555554443211001224 8999999999999999887653
No 216
>PLN03037 lipase class 3 family protein; Provisional
Probab=88.71 E-value=0.92 Score=43.40 Aligned_cols=22 Identities=27% Similarity=0.400 Sum_probs=19.4
Q ss_pred eEEEeeCCchHHHHHHHHHHhc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAV 204 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~ 204 (344)
+|.|.|||+||.||+..|....
T Consensus 319 SItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 319 SLTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred eEEEeccCHHHHHHHHHHHHHH
Confidence 7999999999999998886653
No 217
>PLN02324 triacylglycerol lipase
Probab=88.45 E-value=0.81 Score=42.68 Aligned_cols=40 Identities=18% Similarity=0.035 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+++.+.++.+.+... -..- +|.|.|||.||.||...|...
T Consensus 197 eqVl~eV~~L~~~Yp---~e~~-sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 197 EQVQGELKRLLELYK---NEEI-SITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHHCC---CCCc-eEEEecCcHHHHHHHHHHHHH
Confidence 455555555555321 1123 799999999999999888654
No 218
>PLN02761 lipase class 3 family protein
Probab=88.26 E-value=1.4 Score=42.26 Aligned_cols=43 Identities=14% Similarity=0.064 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHhccccc-CCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 160 DDGWTVLKWAKSRSWLQ-SKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~-~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+++.+.++-+.+..... .-... +|.|.|||.||.||...|...
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~-sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEI-SITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCc-eEEEeccchHHHHHHHHHHHH
Confidence 45555555555432100 11223 899999999999999887654
No 219
>PLN02310 triacylglycerol lipase
Probab=86.94 E-value=1.6 Score=40.68 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=19.4
Q ss_pred eEEEeeCCchHHHHHHHHHHhc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAV 204 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~ 204 (344)
+|.|.|||.||.||+..+....
T Consensus 210 sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 210 SLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred eEEEEcccHHHHHHHHHHHHHH
Confidence 8999999999999998886653
No 220
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=86.64 E-value=1 Score=37.86 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=32.5
Q ss_pred CcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEE
Q 019193 278 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFY 321 (344)
Q Consensus 278 pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~ 321 (344)
.|+++++|++|.+++.... ..+.+.-...+++++++.+|...
T Consensus 176 ~p~l~i~~~~D~~~p~~~~--~~~~~~~~~~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 176 VPTLIIWGEDDPLVPPESS--EQLAKLIPNSQLVLIEGSGHFAF 217 (230)
T ss_dssp SEEEEEEETTCSSSHHHHH--HHHHHHSTTEEEEEETTCCSTHH
T ss_pred CCeEEEEeCCCCCCCHHHH--HHHHHhcCCCEEEECCCCChHHH
Confidence 3899999999999875433 44555555699999999999653
No 221
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=86.36 E-value=5 Score=38.17 Aligned_cols=106 Identities=13% Similarity=0.076 Sum_probs=69.2
Q ss_pred CcccEEEEEcCCcccccCCCchhh-HHHHHHHHhhCCcEEEeeccCCCCC-CCC-------------CchhhHHHHHHHH
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIY-DILCRRLVGTCKAVVVSVNYRRAPE-NRY-------------PCAYDDGWTVLKW 168 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~-~~~~~~la~~~g~~vv~~dyr~~p~-~~~-------------~~~~~D~~~a~~~ 168 (344)
.. |+.++|-|-|-.. ..+..+ ......+|++.|..|+..++|--.+ +|+ .+++.|+...++.
T Consensus 85 ~g-PiFLmIGGEgp~~--~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 85 GG-PIFLMIGGEGPES--DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CC-ceEEEEcCCCCCC--CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 44 8888887744221 111001 2245577888899999999995432 122 2456788877777
Q ss_pred HHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 169 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 169 l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
+...-.. -++. +.+.+|.|.-|.|+++.=...++ .+.|.+..|.
T Consensus 162 ~n~k~n~--~~~~-~WitFGgSYsGsLsAW~R~~yPe---l~~GsvASSa 205 (514)
T KOG2182|consen 162 MNAKFNF--SDDS-KWITFGGSYSGSLSAWFREKYPE---LTVGSVASSA 205 (514)
T ss_pred HHhhcCC--CCCC-CeEEECCCchhHHHHHHHHhCch---hheeeccccc
Confidence 7654210 3456 89999999999999998777776 4666665553
No 222
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=86.16 E-value=3 Score=36.74 Aligned_cols=102 Identities=18% Similarity=0.221 Sum_probs=56.8
Q ss_pred cCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCC-CC----CchhhHHHHHHHHHHhcccccCCCCCCeEEEe
Q 019193 113 HGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-RY----PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLA 187 (344)
Q Consensus 113 HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~-~~----~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~ 187 (344)
-|.||+-... ..-...+..- +++++++-|...|.. .| ..+.+-..+.++.+.+.-..+.-+..-|++|.
T Consensus 41 TGtGWVdp~a-----~~a~E~l~~G-D~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~ 114 (289)
T PF10081_consen 41 TGTGWVDPWA-----VDALEYLYGG-DVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLY 114 (289)
T ss_pred CCCCccCHHH-----HhHHHHHhCC-CeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEe
Confidence 4778873221 2223444444 799999999976653 11 22333344444444433222221222289999
Q ss_pred eCCchHHHHHHHHHHhcccCCeeeEEEEecccc
Q 019193 188 GDSSGGNIVHHVALRAVESEVEILGNILLNPMF 220 (344)
Q Consensus 188 G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~~ 220 (344)
|.|.|+.-+........+-..+++|++...|-.
T Consensus 115 GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 115 GESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred ccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 999998776654333333234688888777643
No 223
>PLN02847 triacylglycerol lipase
Probab=85.61 E-value=1.5 Score=42.68 Aligned_cols=23 Identities=26% Similarity=0.339 Sum_probs=20.5
Q ss_pred eEEEeeCCchHHHHHHHHHHhcc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVE 205 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~ 205 (344)
+++|.|||.||.+|+.++.....
T Consensus 252 kLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 252 KIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred eEEEeccChHHHHHHHHHHHHhc
Confidence 89999999999999998887643
No 224
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=85.45 E-value=4 Score=37.12 Aligned_cols=61 Identities=23% Similarity=0.210 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHh-cccccCCCCCCeEEEeeCCchHHHHHHHHHHhcc-------cCCeeeEEEEeccccCCCC
Q 019193 160 DDGWTVLKWAKS-RSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQE 224 (344)
Q Consensus 160 ~D~~~a~~~l~~-~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~-------~~~~i~~~il~~p~~~~~~ 224 (344)
+|...+++-+.+ .+. .... +++|.|+|.||+.+-.+|...-+ ....++|+++-.|+++...
T Consensus 32 ~d~~~fL~~Ff~~~p~---~~~~-~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~ 100 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQ---YFSN-PLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDF 100 (319)
T ss_pred HHHHHHHHHHHHhCcc---cccC-CeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccc
Confidence 555555544333 332 4456 89999999999988888776532 2357899999999987644
No 225
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=82.90 E-value=2.9 Score=39.50 Aligned_cols=72 Identities=17% Similarity=0.070 Sum_probs=42.5
Q ss_pred hHHHHHHHHhhCCcE------EEeeccCCCCCCC--CCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHH
Q 019193 127 YDILCRRLVGTCKAV------VVSVNYRRAPENR--YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHH 198 (344)
Q Consensus 127 ~~~~~~~la~~~g~~------vv~~dyr~~p~~~--~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~ 198 (344)
+..+...++.= ||. -+..|+|+++..+ ...-+.+...-++.+.+. -... +|+|++|||||.+.+.
T Consensus 126 w~~~i~~lv~~-GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~-----~G~k-kVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 126 WHELIENLVGI-GYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKL-----NGGK-KVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHhh-CcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHH-----cCCC-ceEEEecCCccHHHHH
Confidence 45556666653 555 4566888876332 112233344444433332 1124 9999999999999998
Q ss_pred HHHHhcc
Q 019193 199 VALRAVE 205 (344)
Q Consensus 199 ~a~~~~~ 205 (344)
.....++
T Consensus 199 Fl~w~~~ 205 (473)
T KOG2369|consen 199 FLKWVEA 205 (473)
T ss_pred HHhcccc
Confidence 8766544
No 226
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=82.50 E-value=2.8 Score=38.37 Aligned_cols=41 Identities=22% Similarity=0.178 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcccC
Q 019193 161 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE 207 (344)
Q Consensus 161 D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~ 207 (344)
++.+.++-+.+... .- +|.+.|||+||.+|...|......+
T Consensus 156 ~~~~~~~~L~~~~~-----~~-~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 156 GLDAELRRLIELYP-----NY-SIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HHHHHHHHHHHhcC-----Cc-EEEEecCChHHHHHHHHHHHHHHcC
Confidence 44444555554422 23 8999999999999999888765443
No 227
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=82.49 E-value=3.4 Score=40.24 Aligned_cols=64 Identities=14% Similarity=0.252 Sum_probs=45.8
Q ss_pred CcEEEEEcCCCcChH---HHHHHHHHHHHC-C--CCEEEEEeCCCceEEEEC---CC--------chHHHHHHHHHHHHH
Q 019193 278 PKSLVVVAGLDLIQD---WQLAYMEGLKKA-G--QDVKLLYLEQATIGFYFL---PN--------NGHFYTVMDEISNFV 340 (344)
Q Consensus 278 pP~li~~G~~D~l~~---~~~~~~~~L~~~-g--~~~~~~~~~g~~H~f~~~---~~--------~~~~~~~~~~~~~fl 340 (344)
.|++|+||..|.++| .++.|....+.. | ....+++++++.| |+.| |+ .....++++.|..+|
T Consensus 556 KPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqH-fDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L 634 (690)
T PF10605_consen 556 KPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQH-FDAFLDFPGFDTRFVPLHPYFFQALDLMWAHL 634 (690)
T ss_pred CceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCee-chhhccCCCCCcccccccHHHHHHHHHHHHHh
Confidence 489999999998876 356666665532 3 4689999999999 4432 22 345677888888888
Q ss_pred hc
Q 019193 341 SC 342 (344)
Q Consensus 341 ~~ 342 (344)
+.
T Consensus 635 ~~ 636 (690)
T PF10605_consen 635 KS 636 (690)
T ss_pred hc
Confidence 64
No 228
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=80.91 E-value=2.5 Score=40.66 Aligned_cols=62 Identities=11% Similarity=0.030 Sum_probs=46.6
Q ss_pred cEEEEEcCCCcChH--HHHHHHHHHHHC-CC-------CEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 279 KSLVVVAGLDLIQD--WQLAYMEGLKKA-GQ-------DVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 279 P~li~~G~~D~l~~--~~~~~~~~L~~~-g~-------~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
++++.||..|.+++ .+..|++++.+. |. =.++...||+.|..--.. +..-+.+..|++|+++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g--~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG--PDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC--CCCCCHHHHHHHHHhC
Confidence 89999999999875 357888887643 21 269999999999874321 2233689999999975
No 229
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=80.89 E-value=3.3 Score=36.44 Aligned_cols=23 Identities=39% Similarity=0.663 Sum_probs=20.3
Q ss_pred CCeEEEeeCCchHHHHHHHHHHh
Q 019193 181 KAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 181 ~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+++|.|.|||.||.+|..+..+.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 34999999999999999988775
No 230
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=80.89 E-value=3.3 Score=36.44 Aligned_cols=23 Identities=39% Similarity=0.663 Sum_probs=20.3
Q ss_pred CCeEEEeeCCchHHHHHHHHHHh
Q 019193 181 KAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 181 ~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+++|.|.|||.||.+|..+..+.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 34999999999999999988775
No 231
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=78.69 E-value=37 Score=30.71 Aligned_cols=40 Identities=15% Similarity=0.014 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
.+.+..|++++..+-. ..+ +|+.+|+|-|+..|-.+|.+.
T Consensus 104 ~~nI~~AYrFL~~~ye----pGD-~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 104 VQNIREAYRFLIFNYE----PGD-EIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHHHHHHhcC----CCC-eEEEeeccchhHHHHHHHHHH
Confidence 3788999999999843 234 999999999999998888765
No 232
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=74.46 E-value=8.6 Score=32.01 Aligned_cols=65 Identities=12% Similarity=0.010 Sum_probs=46.3
Q ss_pred CCcEEEEEcCCCcChHHHHH-HHHHHHHCCC---CEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhcc
Q 019193 277 FPKSLVVVAGLDLIQDWQLA-YMEGLKKAGQ---DVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 343 (344)
Q Consensus 277 ~pP~li~~G~~D~l~~~~~~-~~~~L~~~g~---~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~~ 343 (344)
..+++-+-|+.|.+...++. -+..|. .|. ....+..+|++| +.+|.+....++++-.+.+|+.+|
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC-~glp~~~k~~~~~~g~GH-YGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLC-TGLPADMKRHHLQPGVGH-YGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHh-cCCCHHHhhhcccCCCCe-eecccchhhhhhhhHHHHHHHHhC
Confidence 34688889999988654433 334443 232 356778899999 667766677888999999999875
No 233
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=74.24 E-value=6.4 Score=35.00 Aligned_cols=41 Identities=17% Similarity=0.081 Sum_probs=32.3
Q ss_pred hhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 158 AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 158 ~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
.-+.+..++.++.++-. ..+ +|+|+|+|-|+..|-.++...
T Consensus 73 ~~~~I~~ay~~l~~~~~----~gd-~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYE----PGD-RIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred hHHHHHHHHHHHHhccC----Ccc-eEEEEecCccHHHHHHHHHHH
Confidence 34677888899877742 234 999999999999999988765
No 234
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=73.86 E-value=49 Score=27.22 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=22.9
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccCCeeeEEEE-ecc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESEVEILGNIL-LNP 218 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il-~~p 218 (344)
++.++|||.|..++...+... +..+..+++ -||
T Consensus 110 ~~tv~GHSYGS~v~G~A~~~~---~~~vddvv~~GSP 143 (177)
T PF06259_consen 110 HLTVVGHSYGSTVVGLAAQQG---GLRVDDVVLVGSP 143 (177)
T ss_pred CEEEEEecchhHHHHHHhhhC---CCCcccEEEECCC
Confidence 899999999999888766552 224555543 344
No 235
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=72.48 E-value=12 Score=34.32 Aligned_cols=39 Identities=15% Similarity=0.075 Sum_probs=25.0
Q ss_pred HHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 162 GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 162 ~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+..|.+-..+.-.+ +.-+ ++.|.|-|--|..+...|...
T Consensus 217 ~srAMdlAq~eL~q--~~Ik-~F~VTGaSKRgWttwLTAIaD 255 (507)
T COG4287 217 VSRAMDLAQDELEQ--VEIK-GFMVTGASKRGWTTWLTAIAD 255 (507)
T ss_pred HHHHHHHHHhhhhh--eeee-eEEEeccccchHHHHHHHhcC
Confidence 33344444443333 3445 899999999999888777654
No 236
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=68.36 E-value=19 Score=24.97 Aligned_cols=41 Identities=17% Similarity=0.286 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
..+..-++|+++.... -.|. ++.|.|-|.|=+||..++...
T Consensus 21 ~~V~~qI~yvk~~~~~--~GpK-~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKI--NGPK-KVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHC-----TS-S-EEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC--CCCc-eEEEEecCCcccHHHHHHHHh
Confidence 5667778888886543 2457 999999999999998887765
No 237
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.47 E-value=6.3 Score=34.42 Aligned_cols=22 Identities=32% Similarity=0.501 Sum_probs=18.9
Q ss_pred eEEEeeCCchHHHHHHHHHHhc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAV 204 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~ 204 (344)
++.|+|-||||-+|-.+....+
T Consensus 196 ~~~~~g~Smgg~~a~~vgS~~q 217 (371)
T KOG1551|consen 196 NLNLVGRSMGGDIANQVGSLHQ 217 (371)
T ss_pred cceeeeeecccHHHHhhcccCC
Confidence 8999999999999998876543
No 238
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=64.61 E-value=13 Score=25.41 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=24.4
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEe
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVS 144 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~ 144 (344)
.. |.++++|||.- .. -+.++.++|++.|+.++.
T Consensus 30 ~~-~~~~lvhGga~----~G---aD~iA~~wA~~~gv~~~~ 62 (71)
T PF10686_consen 30 RH-PDMVLVHGGAP----KG---ADRIAARWARERGVPVIR 62 (71)
T ss_pred hC-CCEEEEECCCC----CC---HHHHHHHHHHHCCCeeEE
Confidence 44 78899999641 22 478899999998887664
No 239
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=59.79 E-value=64 Score=29.11 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=23.5
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEe
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVS 144 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~ 144 (344)
+.|+++|||++..-.-..+.|..+++.+.++ |+.++.
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~-~~~ivl 215 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPS-GLRIKL 215 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHC-CCeEEE
Confidence 7788899987532122223467777788765 876654
No 240
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=59.60 E-value=50 Score=29.68 Aligned_cols=83 Identities=12% Similarity=0.036 Sum_probs=45.9
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeec----cC--------CCCCCCCCchhhHHHHHHHHHHh
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN----YR--------RAPENRYPCAYDDGWTVLKWAKS 171 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d----yr--------~~p~~~~~~~~~D~~~a~~~l~~ 171 (344)
+. |.|++.||+++..-.-..+.|..+++.+.++ |+.++..- -+ ..+..... .-.++.+....
T Consensus 178 ~~-~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~-~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~-g~~sL~el~al--- 251 (319)
T TIGR02193 178 PA-PYAVLLHATSRDDKTWPEERWRELARLLLAR-GLQIVLPWGNDAEKQRAERIAEALPGAVVL-PKMSLAEVAAL--- 251 (319)
T ss_pred CC-CEEEEEeCCCcccCCCCHHHHHHHHHHHHHC-CCeEEEeCCCHHHHHHHHHHHhhCCCCeec-CCCCHHHHHHH---
Confidence 45 8899999988643222223466777788765 77665431 00 00110000 00111111111
Q ss_pred cccccCCCCCCeEEEeeCCchHHHHHHH
Q 019193 172 RSWLQSKDSKAHIYLAGDSSGGNIVHHV 199 (344)
Q Consensus 172 ~~~~~~~d~~~~i~l~G~SaGG~lA~~~ 199 (344)
+... +++|.+||.-.|+|.++
T Consensus 252 ------i~~a-~l~I~~DSgp~HlAaa~ 272 (319)
T TIGR02193 252 ------LAGA-DAVVGVDTGLTHLAAAL 272 (319)
T ss_pred ------HHcC-CEEEeCCChHHHHHHHc
Confidence 3334 89999999999999875
No 241
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=58.93 E-value=43 Score=24.72 Aligned_cols=49 Identities=14% Similarity=0.294 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 293 WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 293 ~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
.+..|..-|+..|+++++....+.....++. +.+...++..++.+|++.
T Consensus 12 ~AqaF~DYl~sqgI~~~i~~~~~~~~~lwl~-de~~~~~a~~el~~Fl~n 60 (101)
T PF12122_consen 12 AAQAFIDYLASQGIELQIEPEGQGQFALWLH-DEEHLEQAEQELEEFLQN 60 (101)
T ss_dssp HHHHHHHHHHHTT--EEEE-SSSE--EEEES--GGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCeEEEEECCCCceEEEEe-CHHHHHHHHHHHHHHHHC
Confidence 3578999999999988888755443444444 446778888899999874
No 242
>COG4425 Predicted membrane protein [Function unknown]
Probab=58.46 E-value=29 Score=32.79 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=46.7
Q ss_pred EEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC---------CCCCCCchhhHHHHHHHHHHhcccccCCC
Q 019193 109 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA---------PENRYPCAYDDGWTVLKWAKSRSWLQSKD 179 (344)
Q Consensus 109 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~---------p~~~~~~~~~D~~~a~~~l~~~~~~~~~d 179 (344)
|+---|-||+- .. -......|-.- +++.|++-|..- |++...++-.=..+++.|....+. -.
T Consensus 325 Vv~~TGTGWId--p~---a~~t~EyL~~G-d~asVsmQYSyL~SwLSllvdpdyg~~aa~aLf~aVy~yw~qLP~---~s 395 (588)
T COG4425 325 VVTSTGTGWID--PA---AADTLEYLYNG-DVASVSMQYSYLPSWLSLLVDPDYGADAARALFEAVYGYWTQLPK---SS 395 (588)
T ss_pred EEcCCCCCCCC--HH---HHhHHHHHhCC-ceEEEEEehhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhCCc---CC
Confidence 33345778873 21 12334455544 799999999832 444444433334556666666554 23
Q ss_pred CCCeEEEeeCCchHHHHH
Q 019193 180 SKAHIYLAGDSSGGNIVH 197 (344)
Q Consensus 180 ~~~~i~l~G~SaGG~lA~ 197 (344)
.- |++|.|.|.|+.-..
T Consensus 396 RP-KLylhG~SLGa~~s~ 412 (588)
T COG4425 396 RP-KLYLHGESLGAMGSE 412 (588)
T ss_pred CC-ceEEeccccccccCc
Confidence 33 899999999985433
No 243
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=56.47 E-value=46 Score=28.28 Aligned_cols=19 Identities=32% Similarity=0.244 Sum_probs=16.1
Q ss_pred eEEEeeCCchHHHHHHHHH
Q 019193 183 HIYLAGDSSGGNIVHHVAL 201 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~ 201 (344)
+|.|+++|||=..|..+..
T Consensus 58 ~i~lvAWSmGVw~A~~~l~ 76 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQ 76 (213)
T ss_pred eEEEEEEeHHHHHHHHHhc
Confidence 8999999999988876643
No 244
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=55.20 E-value=1.1e+02 Score=27.92 Aligned_cols=61 Identities=18% Similarity=0.169 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHhcc---c---CCeeeEEEEeccccCCC
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE---S---EVEILGNILLNPMFGGQ 223 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~---~---~~~i~~~il~~p~~~~~ 223 (344)
.|....++-+..+..+ .... +++|+..|.||-+|..++....+ + .....+++|-.+|++..
T Consensus 103 ~Dl~~llk~f~~~h~e--~~t~-P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 103 LDLVELLKGFFTNHPE--FKTV-PLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPE 169 (414)
T ss_pred HHHHHHHHHHHhcCcc--cccc-ceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChh
Confidence 4554444444433322 4555 99999999999999988876532 1 23567888888776543
No 245
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=54.90 E-value=27 Score=24.29 Aligned_cols=60 Identities=15% Similarity=0.081 Sum_probs=40.6
Q ss_pred cEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCceEEEEC--CCchHHHHHHHHHHHHHh
Q 019193 279 KSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFL--PNNGHFYTVMDEISNFVS 341 (344)
Q Consensus 279 P~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~--~~~~~~~~~~~~~~~fl~ 341 (344)
=++|+||-.|.... =..+++.|.+.|..| ..++--+|+..-. ...+..++..+++.+|++
T Consensus 18 ~v~i~HG~~eh~~r-y~~~a~~L~~~G~~V--~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 18 VVVIVHGFGEHSGR-YAHLAEFLAEQGYAV--FAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEeCCcHHHHHH-HHHHHHHHHhCCCEE--EEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 48888998775543 246788898888754 4556667775432 123457788899988874
No 246
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.93 E-value=47 Score=32.71 Aligned_cols=25 Identities=32% Similarity=0.480 Sum_probs=19.3
Q ss_pred CCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 178 KDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 178 ~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
.|.. .|+-+||||||-++=.+....
T Consensus 523 G~~R-PivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 523 GDDR-PIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred CCCC-ceEEEecccchHHHHHHHHHH
Confidence 4455 899999999998887665543
No 247
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=45.64 E-value=74 Score=21.12 Aligned_cols=41 Identities=15% Similarity=0.224 Sum_probs=16.5
Q ss_pred ceEEEEEEeCCCCeEEEEee-cCCCCCCCCccccccCCCCCCCcccEEEEEcC
Q 019193 63 VFSFDVIVDRGTNLLCRIYR-PTNGEEHRPNIAELEKPVSSEVVVPVIIFFHG 114 (344)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~-P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HG 114 (344)
...++..+...++.-+.+++ |.... ......++ |+|++.||
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~----------~~~~~~~k-~pVll~HG 51 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKN----------SSNQNKKK-PPVLLQHG 51 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTT----------CTTTTTT---EEEEE--
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCC----------CcccCCCC-CcEEEECC
Confidence 33455555556775554442 22210 01224566 99999999
No 248
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=45.25 E-value=51 Score=30.05 Aligned_cols=88 Identities=23% Similarity=0.121 Sum_probs=45.5
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhh-CCcEEEeeccC------CCCCCC-----------CCchhhHHHHHHHH
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGT-CKAVVVSVNYR------RAPENR-----------YPCAYDDGWTVLKW 168 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~-~g~~vv~~dyr------~~p~~~-----------~~~~~~D~~~a~~~ 168 (344)
.+=+++||-| +... .....+.+.++ .++.|+.+|=. ..+..+ |....-|.....+|
T Consensus 212 ~vDi~V~gaG----TGGT--itgvGRylke~~~~~kVv~vdp~~S~~~~~~~~g~~~~~I~GIGyg~~p~~ld~~~vd~~ 285 (362)
T KOG1252|consen 212 KVDIFVAGAG----TGGT--ITGVGRYLKEQNPNIKVVGVDPQESIVLSGGKPGPTFHKIQGIGYGFIPTTLDTKLVDEV 285 (362)
T ss_pred CCCEEEeccC----CCce--eechhHHHHHhCCCCEEEEeCCCcceeccCCCCCCCccceeccccCcCccccchHHHHHH
Confidence 4447788833 1111 23445555554 35778777622 222222 33344455555556
Q ss_pred HHhccccc-----CCCCCCeEEEeeCCchHHHHHHHHH
Q 019193 169 AKSRSWLQ-----SKDSKAHIYLAGDSSGGNIVHHVAL 201 (344)
Q Consensus 169 l~~~~~~~-----~~d~~~~i~l~G~SaGG~lA~~~a~ 201 (344)
++....+- .+-.+ .=.++|-|.|++.++++-.
T Consensus 286 ~~~~~d~A~~~Ar~La~e-eGll~G~SSGan~~aAl~~ 322 (362)
T KOG1252|consen 286 LKVSSDEAIEMARRLALE-EGLLVGISSGANVAAALKL 322 (362)
T ss_pred HHhCCHHHHHHHHHHHHh-hCeeecccchHHHHHHHHH
Confidence 55332100 01123 4578999999998876543
No 249
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=45.05 E-value=2.3e+02 Score=25.37 Aligned_cols=52 Identities=15% Similarity=0.111 Sum_probs=31.3
Q ss_pred CCCCCCCCCchhh----HHHHHHHHHHhcccccC---CCCCCeEEEeeCCchHHHHHHH
Q 019193 148 RRAPENRYPCAYD----DGWTVLKWAKSRSWLQS---KDSKAHIYLAGDSSGGNIVHHV 199 (344)
Q Consensus 148 r~~p~~~~~~~~~----D~~~a~~~l~~~~~~~~---~d~~~~i~l~G~SaGG~lA~~~ 199 (344)
.+.|...+.+.++ -..++++++......+. +|.-++|=++-||+-|.+....
T Consensus 84 ~LGPNGgI~TsLNLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~ 142 (366)
T KOG1532|consen 84 QLGPNGGIVTSLNLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITET 142 (366)
T ss_pred CCCCCcchhhhHHHHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhh
Confidence 3666666555442 33344455555444333 5544499999999999887653
No 250
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=44.74 E-value=89 Score=26.73 Aligned_cols=85 Identities=13% Similarity=0.040 Sum_probs=42.2
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccC----------CCCCCC--CC--chhhHHHHHHHHH
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR----------RAPENR--YP--CAYDDGWTVLKWA 169 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr----------~~p~~~--~~--~~~~D~~~a~~~l 169 (344)
+. +.|++.+|+++..-.-..+.|..++..|.++ ++.|+.+--. ...... .- ....++.+....
T Consensus 104 ~~-~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~-~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~al- 180 (247)
T PF01075_consen 104 DK-PYIGINPGASWPSKRWPAEKWAELIERLKER-GYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAAL- 180 (247)
T ss_dssp TS-SEEEEE---SSGGGS--HHHHHHHHHHHCCC-T-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHH-
T ss_pred cC-CeEEEeecCCCccccCCHHHHHHHHHHHHhh-CceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHH-
Confidence 45 8899999988743333334467777777776 6666543211 000000 00 000122222222
Q ss_pred HhcccccCCCCCCeEEEeeCCchHHHHHHHH
Q 019193 170 KSRSWLQSKDSKAHIYLAGDSSGGNIVHHVA 200 (344)
Q Consensus 170 ~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a 200 (344)
+... +++|.++|.-.|+|.++.
T Consensus 181 --------i~~a-~~~I~~Dtg~~HlA~a~~ 202 (247)
T PF01075_consen 181 --------ISRA-DLVIGNDTGPMHLAAALG 202 (247)
T ss_dssp --------HHTS-SEEEEESSHHHHHHHHTT
T ss_pred --------HhcC-CEEEecCChHHHHHHHHh
Confidence 2223 899999999999998764
No 251
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=44.57 E-value=14 Score=34.75 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=40.7
Q ss_pred CcEEEEEcCCCcChHHH-HHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 278 PKSLVVVAGLDLIQDWQ-LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 278 pP~li~~G~~D~l~~~~-~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
.|++|+.|+.|.+..+- ..+.+.+...|..+-....||.++... .+-.+......+.+++||..
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~-~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK-WPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT-T-S-S-CCHHHHHHHHHHHH
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc-CCCCcCHHHHHHHHHHHHhc
Confidence 38999999999998664 444566889999999999999988521 11123345677888888864
No 252
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=42.97 E-value=28 Score=30.00 Aligned_cols=34 Identities=24% Similarity=0.104 Sum_probs=24.7
Q ss_pred HHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 165 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 165 a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+++++.++. +.++ .-.+.|-|+|+..|+.++...
T Consensus 17 Vl~~L~e~g----i~~~-~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 17 VLSLLIEAG----VINE-TTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHcC----CCCC-CCEEEEEcHHHHHHHHHHcCC
Confidence 456666653 4444 568999999999999887653
No 253
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=42.97 E-value=96 Score=28.56 Aligned_cols=78 Identities=21% Similarity=0.238 Sum_probs=52.4
Q ss_pred EEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEe
Q 019193 108 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLA 187 (344)
Q Consensus 108 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~ 187 (344)
-|||-|-..+...+.....-+...+.+++.-|.+.+.+ |+..=...-.+-+.|+.+.++++++-+. ++ .|.+.
T Consensus 268 PVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnf-y~~~isc~~~A~v~~v~~Hi~hIr~VaG---~~---hIGlG 340 (419)
T KOG4127|consen 268 PVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNF-YPGFISCSDRATVSDVADHINHIRAVAG---ID---HIGLG 340 (419)
T ss_pred ceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEe-ecccccCCCcccHHHHHHHHHHHHHhhc---cc---eeecc
Confidence 36899998877755544445777888888744444444 4432223344558999999999999854 43 88888
Q ss_pred eCCch
Q 019193 188 GDSSG 192 (344)
Q Consensus 188 G~SaG 192 (344)
|+=-|
T Consensus 341 g~yDG 345 (419)
T KOG4127|consen 341 GDYDG 345 (419)
T ss_pred CCcCC
Confidence 76544
No 254
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=42.76 E-value=1.5e+02 Score=26.04 Aligned_cols=82 Identities=16% Similarity=0.129 Sum_probs=43.3
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCC-------------CCCCCCchhhHHHHHHHHHHhcc
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA-------------PENRYPCAYDDGWTVLKWAKSRS 173 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~-------------p~~~~~~~~~D~~~a~~~l~~~~ 173 (344)
+.|++..|+++..-.-..+.|..+++.+.++ |+.++.+-..-. +..-.-....+..+....
T Consensus 122 ~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~-~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~l----- 195 (279)
T cd03789 122 PVVVLPPGASGPAKRWPAERFAALADRLLAR-GARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAAL----- 195 (279)
T ss_pred CEEEECCCCCCccccCCHHHHHHHHHHHHHC-CCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHH-----
Confidence 5566555555433233334577788888887 888876532100 000000000122222222
Q ss_pred cccCCCCCCeEEEeeCCchHHHHHHH
Q 019193 174 WLQSKDSKAHIYLAGDSSGGNIVHHV 199 (344)
Q Consensus 174 ~~~~~d~~~~i~l~G~SaGG~lA~~~ 199 (344)
++.. +++|..+|.-.|+|..+
T Consensus 196 ----i~~~-~l~I~~Dsg~~HlA~a~ 216 (279)
T cd03789 196 ----LARA-DLVVTNDSGPMHLAAAL 216 (279)
T ss_pred ----HHhC-CEEEeeCCHHHHHHHHc
Confidence 2334 89999999988988644
No 255
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=42.73 E-value=65 Score=29.63 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=27.7
Q ss_pred eEEEeeCCchHHHHHHHHHHhcccC--CeeeEEEEecccc
Q 019193 183 HIYLAGDSSGGNIVHHVALRAVESE--VEILGNILLNPMF 220 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~~~~~~--~~i~~~il~~p~~ 220 (344)
+|.|+|||.|+-+.........+.+ ..|.-++++...+
T Consensus 221 pVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 221 PVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred ceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 7999999999999987776664432 3467777766444
No 256
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=39.90 E-value=1.2e+02 Score=27.99 Aligned_cols=61 Identities=16% Similarity=0.151 Sum_probs=46.4
Q ss_pred cEEEEEcCCCcCh--HHHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 279 KSLVVVAGLDLIQ--DWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 279 P~li~~G~~D~l~--~~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
+.+-+.+..|.++ ++.+.+++..++.|+.++..-+.+..|.-+... ......+...+|++.
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~---~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRS---FPKTYLKKCSEFLRS 289 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeecc---CcHHHHHHHHHHHHh
Confidence 4555557788765 456888888999999999999999999875442 245677788888874
No 257
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=39.61 E-value=78 Score=22.16 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=18.9
Q ss_pred CCcEEEEEcCCCcChHHH--HHHHHHHH----HCCCCEEEE
Q 019193 277 FPKSLVVVAGLDLIQDWQ--LAYMEGLK----KAGQDVKLL 311 (344)
Q Consensus 277 ~pP~li~~G~~D~l~~~~--~~~~~~L~----~~g~~~~~~ 311 (344)
-||++++.+.+...++++ +-+...++ =.|+++.+.
T Consensus 38 ~PPtFv~f~N~~~~~~~sY~ryL~n~lRe~f~f~G~Pi~l~ 78 (80)
T PF14714_consen 38 RPPTFVLFVNDPELLPESYKRYLENQLREAFGFEGVPIRLI 78 (80)
T ss_dssp TTTEEEEEES-CCC--HHHHHHHHHHHHHHH--TTS--EEE
T ss_pred CCCEEEEEeCCcccCCHHHHHHHHHHHHHHCCCCceeEEEE
Confidence 689999999987666654 22333343 357777665
No 258
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=39.58 E-value=65 Score=27.53 Aligned_cols=57 Identities=12% Similarity=-0.009 Sum_probs=33.8
Q ss_pred HHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccc-cCCCCCCeEEEeeCCch
Q 019193 128 DILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWL-QSKDSKAHIYLAGDSSG 192 (344)
Q Consensus 128 ~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~-~~~d~~~~i~l~G~SaG 192 (344)
..+.+.+...-|+++++|+|-. .+|..+ ..+++|+...... .....+ .+.|+|.|.|
T Consensus 82 ~~l~~~v~~ADgvii~TPEYn~----sipg~L---KNaiDwls~~~~~~~~~~~K-pvaivgaSgg 139 (219)
T TIGR02690 82 RELRQLSEWSEGQVWCSPERHG----AITGSQ---KDQIDWIPLSVGPVRPTQGK-TLAVMQVSGG 139 (219)
T ss_pred HHHHHHHHhCCEEEEeCCcccc----CcCHHH---HHHHHhcccCcccccccCCC-cEEEEEeCCc
Confidence 4455566655578888887754 334443 4577888653110 013445 7999998843
No 259
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=39.05 E-value=1.7e+02 Score=31.99 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=53.6
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEE
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 186 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l 186 (344)
|.+.|+|- +-|. ..-...++.++.+-...+-+. +.---+-++++.+. |+++-.. +.|.++.-|
T Consensus 2124 ~~~Ffv~p---IEG~------tt~l~~la~rle~PaYglQ~T---~~vP~dSies~A~~--yirqirk---vQP~GPYrl 2186 (2376)
T KOG1202|consen 2124 PPLFFVHP---IEGF------TTALESLASRLEIPAYGLQCT---EAVPLDSIESLAAY--YIRQIRK---VQPEGPYRL 2186 (2376)
T ss_pred CceEEEec---cccc------hHHHHHHHhhcCCcchhhhcc---ccCCcchHHHHHHH--HHHHHHh---cCCCCCeee
Confidence 77899997 2122 233456676644443333322 11111334554433 2332222 566669999
Q ss_pred eeCCchHHHHHHHHHHhcccCCeeeEEEEecc
Q 019193 187 AGDSSGGNIVHHVALRAVESEVEILGNILLNP 218 (344)
Q Consensus 187 ~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p 218 (344)
+|.|.|+-++..+|....+.... +.+|++.+
T Consensus 2187 ~GYSyG~~l~f~ma~~Lqe~~~~-~~lillDG 2217 (2376)
T KOG1202|consen 2187 AGYSYGACLAFEMASQLQEQQSP-APLILLDG 2217 (2376)
T ss_pred eccchhHHHHHHHHHHHHhhcCC-CcEEEecC
Confidence 99999999999998887554322 33677664
No 260
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=38.30 E-value=48 Score=30.95 Aligned_cols=16 Identities=31% Similarity=0.495 Sum_probs=13.6
Q ss_pred eEEEeeCCchHHHHHH
Q 019193 183 HIYLAGDSSGGNIVHH 198 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~ 198 (344)
+|..+|||.||-.+..
T Consensus 151 kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARY 166 (405)
T ss_pred eeeeeeeecCCeeeeE
Confidence 9999999999976643
No 261
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=34.86 E-value=4.1e+02 Score=25.37 Aligned_cols=103 Identities=21% Similarity=0.196 Sum_probs=65.1
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEe--ec-cCCC-----------------CCCCCCchhhHHHHHH
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVS--VN-YRRA-----------------PENRYPCAYDDGWTVL 166 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~--~d-yr~~-----------------p~~~~~~~~~D~~~a~ 166 (344)
|.||++=| ..|+..+-+-..++.+|..+ |..|.. .| ||.+ ++..-..+++=+.+++
T Consensus 100 P~vImmvG---LQGsGKTTt~~KLA~~lkk~-~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al 175 (451)
T COG0541 100 PTVILMVG---LQGSGKTTTAGKLAKYLKKK-GKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAAL 175 (451)
T ss_pred CeEEEEEe---ccCCChHhHHHHHHHHHHHc-CCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHH
Confidence 88999888 44555554456677777774 766554 44 6621 1211223445556777
Q ss_pred HHHHhcccc---------c---------------CCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEE
Q 019193 167 KWAKSRSWL---------Q---------------SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNIL 215 (344)
Q Consensus 167 ~~l~~~~~~---------~---------------~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il 215 (344)
+++.++... + -+.|+ .+.++=+|+=|.-|...|....+ ...+.|+|+
T Consensus 176 ~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~-E~llVvDam~GQdA~~~A~aF~e-~l~itGvIl 246 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPD-ETLLVVDAMIGQDAVNTAKAFNE-ALGITGVIL 246 (451)
T ss_pred HHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCC-eEEEEEecccchHHHHHHHHHhh-hcCCceEEE
Confidence 777643100 0 17889 99999999999999998887643 335666665
No 262
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=34.41 E-value=85 Score=23.79 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHH
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIV 196 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA 196 (344)
..++.+++.|.... ...+ .|+|+|||--|.+.
T Consensus 42 ~~~~~~sl~~av~~-----l~v~-~ivV~gHt~CG~v~ 73 (119)
T cd00382 42 DLDVLASLEYAVEV-----LGVK-HIIVCGHTDCGAVK 73 (119)
T ss_pred cccHHHHHHHHHHh-----hCCC-EEEEEccCCCcHHH
Confidence 35678888888776 3445 99999998766554
No 263
>PLN02748 tRNA dimethylallyltransferase
Probab=32.51 E-value=2.8e+02 Score=26.85 Aligned_cols=33 Identities=12% Similarity=0.208 Sum_probs=24.4
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeec
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d 146 (344)
+-+|.|-|- .|+. -..++..||.+.+..+++.|
T Consensus 22 ~~~i~i~Gp---tgsG----Ks~la~~la~~~~~eii~~D 54 (468)
T PLN02748 22 AKVVVVMGP---TGSG----KSKLAVDLASHFPVEIINAD 54 (468)
T ss_pred CCEEEEECC---CCCC----HHHHHHHHHHhcCeeEEcCc
Confidence 557788882 2333 24678899999999999999
No 264
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=32.26 E-value=33 Score=31.08 Aligned_cols=17 Identities=29% Similarity=0.567 Sum_probs=15.5
Q ss_pred EEeeCCchHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVAL 201 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~ 201 (344)
.|+|.|+||.+|++++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 68999999999999885
No 265
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=31.18 E-value=33 Score=28.24 Aligned_cols=19 Identities=32% Similarity=0.326 Sum_probs=16.5
Q ss_pred EEEeeCCchHHHHHHHHHH
Q 019193 184 IYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~ 202 (344)
=.++|.|+||.+|+.++..
T Consensus 29 d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 29 KRVAGTSAGAITAALLALG 47 (194)
T ss_pred ceEEEECHHHHHHHHHHcC
Confidence 3689999999999988864
No 266
>PRK10279 hypothetical protein; Provisional
Probab=30.93 E-value=61 Score=29.18 Aligned_cols=19 Identities=26% Similarity=0.093 Sum_probs=16.1
Q ss_pred EEEeeCCchHHHHHHHHHH
Q 019193 184 IYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~ 202 (344)
-.|+|.|+|+.+++.+|..
T Consensus 35 d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 35 DIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred CEEEEEcHHHHHHHHHHcC
Confidence 3789999999999988753
No 267
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=30.61 E-value=58 Score=28.95 Aligned_cols=35 Identities=31% Similarity=0.445 Sum_probs=26.4
Q ss_pred CCcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCC
Q 019193 103 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP 151 (344)
Q Consensus 103 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p 151 (344)
.+- |.|+|.-|+|+. ..+++.. ||-|+..|....|
T Consensus 250 ~~v-Pmi~fakG~g~~------------Le~l~~t-G~DVvgLDWTvdp 284 (359)
T KOG2872|consen 250 APV-PMILFAKGSGGA------------LEELAQT-GYDVVGLDWTVDP 284 (359)
T ss_pred CCC-ceEEEEcCcchH------------HHHHHhc-CCcEEeecccccH
Confidence 355 999999997743 3466765 9999999987543
No 268
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=29.54 E-value=64 Score=29.13 Aligned_cols=31 Identities=23% Similarity=0.137 Sum_probs=21.9
Q ss_pred HHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHH
Q 019193 165 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 165 a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~ 202 (344)
+++++.++. +.++ .|+|.|+|+.+++.++..
T Consensus 33 vL~aLee~g----i~~d---~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALEEAG----IPVD---MVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHcC----CCCC---EEEEECHHHHHHHHHHcC
Confidence 445555552 4433 689999999999988865
No 269
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=29.13 E-value=90 Score=24.36 Aligned_cols=20 Identities=25% Similarity=0.085 Sum_probs=15.7
Q ss_pred HHHHHHHhhCCcEEEeeccC
Q 019193 129 ILCRRLVGTCKAVVVSVNYR 148 (344)
Q Consensus 129 ~~~~~la~~~g~~vv~~dyr 148 (344)
....++++.+||.|..+|=|
T Consensus 11 ~al~~la~~lg~~v~v~d~r 30 (136)
T PF13478_consen 11 RALARLAALLGFRVTVVDPR 30 (136)
T ss_dssp HHHHHHHHHCTEEEEEEES-
T ss_pred HHHHHHHHhCCCEEEEEcCC
Confidence 34567888889999999988
No 270
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=28.94 E-value=40 Score=30.33 Aligned_cols=17 Identities=29% Similarity=0.589 Sum_probs=15.3
Q ss_pred EEeeCCchHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVAL 201 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~ 201 (344)
.++|.|+||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999875
No 271
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=28.37 E-value=1.1e+02 Score=25.21 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHH
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHV 199 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~ 199 (344)
.+..++++|.... +... .|+|+|||-=|.+.+.+
T Consensus 65 ~~~~asleyAv~~-----L~v~-~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 65 LNCLSVLQYAVDV-----LKVK-HIIVCGHYGCGGVKAAL 98 (182)
T ss_pred cchhhhHHHHHHh-----cCCC-EEEEecCCCchHHHHHH
Confidence 3577888888776 3445 99999999877766654
No 272
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=28.23 E-value=70 Score=27.81 Aligned_cols=17 Identities=18% Similarity=0.259 Sum_probs=15.3
Q ss_pred EeeCCchHHHHHHHHHH
Q 019193 186 LAGDSSGGNIVHHVALR 202 (344)
Q Consensus 186 l~G~SaGG~lA~~~a~~ 202 (344)
++|-|+|+..|+.++..
T Consensus 34 i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 34 ISGASAGALAACCLLCD 50 (245)
T ss_pred EEEEcHHHHHHHHHHhC
Confidence 99999999999988764
No 273
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=28.02 E-value=1e+02 Score=25.32 Aligned_cols=65 Identities=18% Similarity=0.316 Sum_probs=42.6
Q ss_pred hHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 127 YDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 127 ~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
...+.+.++..-|+++++|.|..+ +|..+ +.+++|+.... ...+ ++.+++.|.|+.-........
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s----~pg~l---KnaiD~l~~~~----~~~K-pv~~~~~s~g~~~~~~a~~~L 122 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGS----YPGAL---KNAIDWLSREA----LGGK-PVLLLGTSGGGAGGLRAQNQL 122 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCC----CCHHH---HHHHHhCCHhH----hCCC-cEEEEecCCCchhHHHHHHHH
Confidence 356677777777899999998753 44443 56778876652 2334 778888887766555444433
No 274
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=27.94 E-value=34 Score=28.97 Aligned_cols=42 Identities=17% Similarity=0.243 Sum_probs=25.6
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCC
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP 151 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p 151 (344)
+.|.||-=-+ ++.....|..-.+...+.+|+.+..++-...|
T Consensus 33 ~~i~FIPtAs---~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~ 74 (224)
T COG3340 33 KTIAFIPTAS---VDSEDDFYVEKVRNALAKLGLEVSELHLSKPP 74 (224)
T ss_pred ceEEEEecCc---cccchHHHHHHHHHHHHHcCCeeeeeeccCCC
Confidence 7788887532 23333335555555556669999887755433
No 275
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=27.73 E-value=65 Score=26.02 Aligned_cols=32 Identities=25% Similarity=0.186 Sum_probs=22.9
Q ss_pred HHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHHHHh
Q 019193 165 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 165 a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~ 203 (344)
+++++.++. +. .-.+.|-|+|+..|+.++...
T Consensus 16 vl~aL~e~g----i~---~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRERG----PL---IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHcC----CC---CCEEEEECHHHHHHHHHHcCC
Confidence 455565553 33 346899999999999888753
No 276
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=27.72 E-value=2.2e+02 Score=24.85 Aligned_cols=38 Identities=21% Similarity=0.139 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCcCh---HHHHHHHHHHHHCCCCEEEEEeCC
Q 019193 278 PKSLVVVAGLDLIQ---DWQLAYMEGLKKAGQDVKLLYLEQ 315 (344)
Q Consensus 278 pP~li~~G~~D~l~---~~~~~~~~~L~~~g~~~~~~~~~g 315 (344)
++++++||..+... .....+++.|.+.|..+-..-++|
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G 67 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRG 67 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCC
Confidence 47888888776432 223567888988887666666654
No 277
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=27.54 E-value=3e+02 Score=24.97 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=46.3
Q ss_pred cEEEEEcC-CcccccCCCchhhHHHHHHHHhhCCcEEEeeccC-----------CCCC---CCCCchhhHHHHHHHHHHh
Q 019193 107 PVIIFFHG-GSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR-----------RAPE---NRYPCAYDDGWTVLKWAKS 171 (344)
Q Consensus 107 p~vv~~HG-Gg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr-----------~~p~---~~~~~~~~D~~~a~~~l~~ 171 (344)
|.|++.|| +++..-.-..+.|..++..+-++ |+.|+.+-.. ..+. ..-...+.+..+.
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~-~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~l------ 248 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAK-GYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAAL------ 248 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHC-CCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHH------
Confidence 88999999 44333233334467777777777 7888876432 0000 0111222333322
Q ss_pred cccccCCCCCCeEEEeeCCchHHHHHHHH
Q 019193 172 RSWLQSKDSKAHIYLAGDSSGGNIVHHVA 200 (344)
Q Consensus 172 ~~~~~~~d~~~~i~l~G~SaGG~lA~~~a 200 (344)
+... ..+|..+|.=.|+|.++-
T Consensus 249 ------i~~a-~l~I~~DSg~~HlAaA~~ 270 (334)
T COG0859 249 ------IAGA-DLVIGNDSGPMHLAAALG 270 (334)
T ss_pred ------HhcC-CEEEccCChHHHHHHHcC
Confidence 2233 789999999888887753
No 278
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=27.33 E-value=75 Score=30.16 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=16.7
Q ss_pred EEeeCCchHHHHHHHHHHh
Q 019193 185 YLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~~ 203 (344)
+|+|.|+|+.+|+.++...
T Consensus 104 vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 104 IISGSSAGSIVAAILCTHT 122 (421)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 5999999999999988754
No 279
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=27.31 E-value=80 Score=24.74 Aligned_cols=38 Identities=29% Similarity=0.302 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCcC-hHHHHHHHHHHHHC-CCCEEEEEeCC
Q 019193 278 PKSLVVVAGLDLI-QDWQLAYMEGLKKA-GQDVKLLYLEQ 315 (344)
Q Consensus 278 pP~li~~G~~D~l-~~~~~~~~~~L~~~-g~~~~~~~~~g 315 (344)
|++||++..+... .....++++.|++. |.+|.+..++.
T Consensus 1 ~kVfI~Ys~d~~~h~~~V~~la~~L~~~~g~~V~lD~~~~ 40 (150)
T PF08357_consen 1 RKVFISYSHDSEEHKEWVLALAEFLRQNCGIDVILDQWEL 40 (150)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHHHHhccCCceeecHHhh
Confidence 4788998775544 35678999999998 99998887775
No 280
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.22 E-value=37 Score=30.63 Aligned_cols=17 Identities=29% Similarity=0.481 Sum_probs=15.3
Q ss_pred EEeeCCchHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVAL 201 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~ 201 (344)
.++|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 69999999999998874
No 281
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=26.89 E-value=1.9e+02 Score=24.54 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCcChHHHHHHHHHHHHCCCCEEEEEeCCCce
Q 019193 277 FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATI 318 (344)
Q Consensus 277 ~pP~li~~G~~D~l~~~~~~~~~~L~~~g~~~~~~~~~g~~H 318 (344)
-+|++++||........-..+...+++.|..+-..-.+|.++
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~ 66 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGY 66 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCC
Confidence 358999999644333322345566666676665555555444
No 282
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=26.50 E-value=2.9e+02 Score=25.02 Aligned_cols=47 Identities=19% Similarity=0.246 Sum_probs=32.5
Q ss_pred HHHHHHHHhhCCcEEEeec----cCCC------------------------CCCCCC--chhhHHHHHHHHHHhccc
Q 019193 128 DILCRRLVGTCKAVVVSVN----YRRA------------------------PENRYP--CAYDDGWTVLKWAKSRSW 174 (344)
Q Consensus 128 ~~~~~~la~~~g~~vv~~d----yr~~------------------------p~~~~~--~~~~D~~~a~~~l~~~~~ 174 (344)
..++-.||++.|..|++.| ||.- |.-.|. ....|+..+++.+...+.
T Consensus 17 T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~~a~~~i~~i~~rgk 93 (308)
T COG0324 17 TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQRDALAAIDDILARGK 93 (308)
T ss_pred HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHHHHHHHHHHHHhCCC
Confidence 5678899999999999999 5511 111222 345788888888877743
No 283
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=26.19 E-value=50 Score=26.82 Aligned_cols=20 Identities=25% Similarity=0.130 Sum_probs=16.8
Q ss_pred EEEeeCCchHHHHHHHHHHh
Q 019193 184 IYLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 184 i~l~G~SaGG~lA~~~a~~~ 203 (344)
=.++|.|+|+..|+.++...
T Consensus 30 d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 30 DIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred eEEEEeCHHHHHHHHHHcCC
Confidence 36899999999999887653
No 284
>PRK10907 intramembrane serine protease GlpG; Provisional
Probab=26.16 E-value=2.5e+02 Score=24.93 Aligned_cols=47 Identities=11% Similarity=0.248 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHCCCCEEEEEeCCCceEEEECCCchHHHHHHHHHHHHHhc
Q 019193 293 WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 342 (344)
Q Consensus 293 ~~~~~~~~L~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~fl~~ 342 (344)
..+.|.+.|+..|++.++. ++.....+.. +.++..++.+++.+|++.
T Consensus 12 ~a~~f~dyl~~~~i~~~~~--~~~~~~lwl~-d~~~~~~~~~~~~~f~~~ 58 (276)
T PRK10907 12 LAQAFVDYMATQGVILTIQ--QHNQSDIWLA-DESQAERVRAELARFLEN 58 (276)
T ss_pred HHHHHHHHHHHCCCcEEEe--cCCceEEEec-CHHHHHHHHHHHHHHHhC
Confidence 4578999999999988877 4433333333 346778888899999874
No 285
>PRK15000 peroxidase; Provisional
Probab=26.14 E-value=3.6e+02 Score=22.47 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=26.8
Q ss_pred cEEEEEcCCcccccCC-CchhhHHHHHHHHhhCCcEEEeec
Q 019193 107 PVIIFFHGGSFAHSSA-NSAIYDILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~-~~~~~~~~~~~la~~~g~~vv~~d 146 (344)
++||++|-+.|..... ....+......+.++ |+.|+.+.
T Consensus 36 ~vvL~F~p~~~t~vC~~El~~l~~~~~~f~~~-g~~vigvS 75 (200)
T PRK15000 36 TTVLFFWPMDFTFVCPSELIAFDKRYEEFQKR-GVEVVGVS 75 (200)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEE
Confidence 8999999988865443 232344556666655 89888886
No 286
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=25.69 E-value=61 Score=24.05 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=23.0
Q ss_pred EEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeecc
Q 019193 109 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNY 147 (344)
Q Consensus 109 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dy 147 (344)
+|++.| ..|+.. ..+++.|++++|+.++..|-
T Consensus 1 vI~I~G---~~gsGK----ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISG---PPGSGK----STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEE---STTSSH----HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEEC---CCCCCH----HHHHHHHHHHHCCeEEEecc
Confidence 466666 223332 56789999988999998886
No 287
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=25.13 E-value=1.5e+02 Score=23.38 Aligned_cols=36 Identities=22% Similarity=0.300 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHHH
Q 019193 159 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVA 200 (344)
Q Consensus 159 ~~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~a 200 (344)
..++.+.+.|.... .... .|+|+|||-=|.+...+.
T Consensus 38 ~~~~~~sle~av~~-----l~v~-~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYH-----LGVK-EIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHT-----ST-S-EEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeec-----CCCC-EEEEEcCCCchHHHHHHh
Confidence 46778899998877 3446 999999998887765443
No 288
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=25.09 E-value=48 Score=30.57 Aligned_cols=18 Identities=33% Similarity=0.497 Sum_probs=15.9
Q ss_pred EEeeCCchHHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~ 202 (344)
.|+|.|+||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 589999999999998863
No 289
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=25.07 E-value=1.9e+02 Score=21.37 Aligned_cols=56 Identities=16% Similarity=0.101 Sum_probs=32.9
Q ss_pred EEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhc
Q 019193 110 IFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSR 172 (344)
Q Consensus 110 v~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~ 172 (344)
|++||-- |.. -..+++.+++..++.++.++...............+...++.+...
T Consensus 1 ill~G~~---G~G----KT~l~~~la~~l~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~ 56 (132)
T PF00004_consen 1 ILLHGPP---GTG----KTTLARALAQYLGFPFIEIDGSELISSYAGDSEQKIRDFFKKAKKS 56 (132)
T ss_dssp EEEESST---TSS----HHHHHHHHHHHTTSEEEEEETTHHHTSSTTHHHHHHHHHHHHHHHT
T ss_pred CEEECcC---CCC----eeHHHHHHHhhccccccccccccccccccccccccccccccccccc
Confidence 5788832 233 3577899999999999888866332222233334444444444333
No 290
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.76 E-value=53 Score=29.27 Aligned_cols=18 Identities=39% Similarity=0.488 Sum_probs=16.1
Q ss_pred EEeeCCchHHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~ 202 (344)
.++|.|+||.+|+.++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 689999999999998764
No 291
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=24.76 E-value=54 Score=26.56 Aligned_cols=18 Identities=22% Similarity=0.235 Sum_probs=16.1
Q ss_pred EEeeCCchHHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~ 202 (344)
.++|-|+|+.+|+.++..
T Consensus 31 ~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 31 IVSGTSAGAIVGALYAAG 48 (175)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 699999999999988864
No 292
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=24.61 E-value=1.1e+02 Score=28.95 Aligned_cols=93 Identities=14% Similarity=0.059 Sum_probs=56.0
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCC-CCC---------CchhhHHHHHHHHHHhcc
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE-NRY---------PCAYDDGWTVLKWAKSRS 173 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~-~~~---------~~~~~D~~~a~~~l~~~~ 173 (344)
.+ |+|++.-|-+-. .... . .++++-++.+-++++||...+ .|- .++..|...+++.++.-
T Consensus 62 dr-PtV~~T~GY~~~---~~p~-r----~Ept~Lld~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i- 131 (448)
T PF05576_consen 62 DR-PTVLYTEGYNVS---TSPR-R----SEPTQLLDGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI- 131 (448)
T ss_pred CC-CeEEEecCcccc---cCcc-c----cchhHhhccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh-
Confidence 55 999988884421 1111 1 234444577889999996422 222 23456777777777553
Q ss_pred cccCCCCCCeEEEeeCCchHHHHHHHHHHhcccCCeeeEEEE
Q 019193 174 WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNIL 215 (344)
Q Consensus 174 ~~~~~d~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~i~~~il 215 (344)
=++ +-+--|-|=||..++..=.-.++ -+.+.|.
T Consensus 132 -----Y~~-kWISTG~SKGGmTa~y~rrFyP~---DVD~tVa 164 (448)
T PF05576_consen 132 -----YPG-KWISTGGSKGGMTAVYYRRFYPD---DVDGTVA 164 (448)
T ss_pred -----ccC-CceecCcCCCceeEEEEeeeCCC---CCCeeee
Confidence 345 89999999999877654333333 2555554
No 293
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=24.24 E-value=97 Score=27.42 Aligned_cols=18 Identities=22% Similarity=0.150 Sum_probs=15.9
Q ss_pred EEeeCCchHHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~ 202 (344)
.|.|.|+|+.+++.++..
T Consensus 41 ~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 41 AIGGTSIGSFVGGLYARE 58 (269)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 689999999999988865
No 294
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=23.66 E-value=58 Score=26.11 Aligned_cols=20 Identities=25% Similarity=0.247 Sum_probs=16.1
Q ss_pred eEEEeeCCchHHHHHHHHHH
Q 019193 183 HIYLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 183 ~i~l~G~SaGG~lA~~~a~~ 202 (344)
--.++|-|+||..|+.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 34699999999999887765
No 295
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.12 E-value=58 Score=28.40 Aligned_cols=18 Identities=44% Similarity=0.628 Sum_probs=16.1
Q ss_pred EEeeCCchHHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~ 202 (344)
.++|.|+||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999998876
No 296
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.07 E-value=57 Score=30.02 Aligned_cols=18 Identities=33% Similarity=0.601 Sum_probs=16.0
Q ss_pred EEeeCCchHHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~ 202 (344)
.++|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 689999999999998863
No 297
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=22.67 E-value=96 Score=26.88 Aligned_cols=19 Identities=26% Similarity=0.309 Sum_probs=16.4
Q ss_pred EEeeCCchHHHHHHHHHHh
Q 019193 185 YLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~~ 203 (344)
.+.|-|+|+..|+.++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 7999999999999887643
No 298
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.34 E-value=1.2e+02 Score=25.83 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=15.9
Q ss_pred EEeeCCchHHHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVALR 202 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~ 202 (344)
.++|.|+|+.+|+.++..
T Consensus 31 ~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 31 AISGTSAGALVGGLFASG 48 (221)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 599999999999988864
No 299
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.29 E-value=1.1e+02 Score=23.92 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhcccccCCCCCCeEEEeeCCchH
Q 019193 161 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGG 193 (344)
Q Consensus 161 D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG 193 (344)
|+...+.|.... ...+ .|+|+||+-=|
T Consensus 41 ~~~~sl~~av~~-----l~~~-~IiV~gHt~Cg 67 (142)
T cd03379 41 DAIRSLVVSVYL-----LGTR-EIIVIHHTDCG 67 (142)
T ss_pred hHHHHHHHHHHH-----hCCC-EEEEEeecCCc
Confidence 666777777666 3445 89999998544
No 300
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=22.25 E-value=3.1e+02 Score=21.20 Aligned_cols=12 Identities=33% Similarity=0.719 Sum_probs=9.6
Q ss_pred CcccEEEEEcCCc
Q 019193 104 VVVPVIIFFHGGS 116 (344)
Q Consensus 104 ~~~p~vv~~HGGg 116 (344)
.+ |.|+-+||..
T Consensus 51 ~K-pLVlSfHG~t 62 (127)
T PF06309_consen 51 RK-PLVLSFHGWT 62 (127)
T ss_pred CC-CEEEEeecCC
Confidence 45 9999999943
No 301
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=21.70 E-value=3.7e+02 Score=20.43 Aligned_cols=24 Identities=25% Similarity=0.409 Sum_probs=20.1
Q ss_pred hHHHHHHHHhhCCcEEEeeccCCC
Q 019193 127 YDILCRRLVGTCKAVVVSVNYRRA 150 (344)
Q Consensus 127 ~~~~~~~la~~~g~~vv~~dyr~~ 150 (344)
-..+|..+.++.|+-++-+.|+.+
T Consensus 106 TNEl~~ylvR~k~iPiLelkYP~s 129 (152)
T COG4050 106 TNELCVYLVRRKGIPILELKYPRS 129 (152)
T ss_pred cchHHHHHhhhcCCceEEEeCCCc
Confidence 478899999988999998888654
No 302
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=21.61 E-value=1.8e+02 Score=24.13 Aligned_cols=38 Identities=24% Similarity=0.313 Sum_probs=26.5
Q ss_pred CcccEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeec
Q 019193 104 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 104 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d 146 (344)
.. |.+|||-| ..|+..+-.-..+.+.|.++ |+.+...|
T Consensus 21 ~~-~~viW~TG---LSGsGKSTiA~ale~~L~~~-G~~~y~LD 58 (197)
T COG0529 21 QK-GAVIWFTG---LSGSGKSTIANALEEKLFAK-GYHVYLLD 58 (197)
T ss_pred CC-CeEEEeec---CCCCCHHHHHHHHHHHHHHc-CCeEEEec
Confidence 45 89999999 34455544345555666665 99999887
No 303
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=21.45 E-value=1e+02 Score=26.94 Aligned_cols=9 Identities=44% Similarity=0.870 Sum_probs=7.4
Q ss_pred EEEEcCCcc
Q 019193 109 IIFFHGGSF 117 (344)
Q Consensus 109 vv~~HGGg~ 117 (344)
+|.+||||-
T Consensus 27 ~VlVHGgg~ 35 (257)
T cd04251 27 LIVVHGGGN 35 (257)
T ss_pred EEEECCCHH
Confidence 789999873
No 304
>PRK15219 carbonic anhydrase; Provisional
Probab=21.32 E-value=1.2e+02 Score=26.49 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHhcccccCCCCCCeEEEeeCCchHHHHHHH
Q 019193 160 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHV 199 (344)
Q Consensus 160 ~D~~~a~~~l~~~~~~~~~d~~~~i~l~G~SaGG~lA~~~ 199 (344)
.|+..+++|.... ++-. .|+|+|||-=|.+.+.+
T Consensus 127 ~~~~~slEyAv~~-----L~v~-~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 127 DDLLGSMEFACAV-----AGAK-VVLVMGHTACGAVKGAI 160 (245)
T ss_pred cchhhHHHHHHHH-----cCCC-EEEEecCCcchHHHHHH
Confidence 3567889998887 4556 99999999877666554
No 305
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=21.22 E-value=2.6e+02 Score=24.39 Aligned_cols=51 Identities=16% Similarity=0.169 Sum_probs=31.8
Q ss_pred EEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHH
Q 019193 108 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDG 162 (344)
Q Consensus 108 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~ 162 (344)
.++||..|. +.....+....+.+++++|+.|+.++.-..+...||...-|.
T Consensus 146 GL~fFy~s~----Cp~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p~fp~~~~d~ 196 (248)
T PRK13703 146 GLMFFYRGQ----DPIDGQLAQVINDFRDTYGLSVIPVSVDGVINPLLPDSRTDQ 196 (248)
T ss_pred eEEEEECCC----CchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCCccCh
Confidence 455555543 233333677889999999999977766554444465554443
No 306
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.17 E-value=64 Score=29.38 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=14.3
Q ss_pred EEeeCCchHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVA 200 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a 200 (344)
.++|.|.||-+|+.++
T Consensus 43 li~GTStGgiia~~l~ 58 (329)
T cd07215 43 LVAGTSTGGILTCLYL 58 (329)
T ss_pred eeeccCHHHHHHHHHh
Confidence 5899999999999865
No 307
>PLN02840 tRNA dimethylallyltransferase
Probab=21.16 E-value=5.2e+02 Score=24.59 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=22.8
Q ss_pred cEEEEEcCCcccccCCCchhhHHHHHHHHhhCCcEEEeec
Q 019193 107 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 146 (344)
Q Consensus 107 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d 146 (344)
+.+|.|-|. .|+. -..++..|+++.+..+++.|
T Consensus 21 ~~vi~I~Gp---tgsG----KTtla~~La~~~~~~iis~D 53 (421)
T PLN02840 21 EKVIVISGP---TGAG----KSRLALELAKRLNGEIISAD 53 (421)
T ss_pred CeEEEEECC---CCCC----HHHHHHHHHHHCCCCeEecc
Confidence 456666662 2233 35678899999888888888
No 308
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=20.91 E-value=64 Score=28.01 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=19.6
Q ss_pred HHHHHHHHHhcccccCCCCCCeEEEeeCCc
Q 019193 162 GWTVLKWAKSRSWLQSKDSKAHIYLAGDSS 191 (344)
Q Consensus 162 ~~~a~~~l~~~~~~~~~d~~~~i~l~G~Sa 191 (344)
=..|++|+.+.-. ++++ +++++|+|.
T Consensus 166 K~~Al~~L~~~~~---~~~~-~vl~aGDSg 191 (247)
T PF05116_consen 166 KGAALRYLMERWG---IPPE-QVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHHHHT-----GG-GEEEEESSG
T ss_pred HHHHHHHHHHHhC---CCHH-HEEEEeCCC
Confidence 4678999988743 7888 999999994
No 309
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=20.87 E-value=2e+02 Score=21.88 Aligned_cols=12 Identities=33% Similarity=0.689 Sum_probs=9.8
Q ss_pred cEEEEEcCCccc
Q 019193 107 PVIIFFHGGSFA 118 (344)
Q Consensus 107 p~vv~~HGGg~~ 118 (344)
.++|++||+-|.
T Consensus 57 klaIfVDGcfWH 68 (117)
T TIGR00632 57 RCVIFIHGCFWH 68 (117)
T ss_pred CEEEEEcccccc
Confidence 789999997554
No 310
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=20.65 E-value=98 Score=26.88 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=14.8
Q ss_pred EEeeCCchHHHHHHHH
Q 019193 185 YLAGDSSGGNIVHHVA 200 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a 200 (344)
.+.|-|+|+..|+.++
T Consensus 34 ~i~GtSaGAl~aa~~a 49 (246)
T cd07222 34 RFAGASAGSLVAAVLL 49 (246)
T ss_pred EEEEECHHHHHHHHHh
Confidence 7999999999999886
No 311
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.53 E-value=71 Score=27.95 Aligned_cols=19 Identities=16% Similarity=0.051 Sum_probs=16.6
Q ss_pred EEeeCCchHHHHHHHHHHh
Q 019193 185 YLAGDSSGGNIVHHVALRA 203 (344)
Q Consensus 185 ~l~G~SaGG~lA~~~a~~~ 203 (344)
.++|.|+|+.+|+.++...
T Consensus 30 ~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred EEEEECHHHHhHHHHHhCC
Confidence 6899999999999987754
No 312
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=20.40 E-value=6.3e+02 Score=22.66 Aligned_cols=21 Identities=10% Similarity=0.041 Sum_probs=17.1
Q ss_pred CCCCeEEEeeCCchHHHHHHHH
Q 019193 179 DSKAHIYLAGDSSGGNIVHHVA 200 (344)
Q Consensus 179 d~~~~i~l~G~SaGG~lA~~~a 200 (344)
... +++|..+|.-.|+|.++.
T Consensus 250 ~~a-~l~I~~DSGp~HlAaA~~ 270 (334)
T TIGR02195 250 ALA-KAVVTNDSGLMHVAAALN 270 (334)
T ss_pred HhC-CEEEeeCCHHHHHHHHcC
Confidence 335 899999999999988753
No 313
>COG0450 AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=20.35 E-value=5.2e+02 Score=21.64 Aligned_cols=98 Identities=14% Similarity=0.238 Sum_probs=59.5
Q ss_pred cEEEEEcCCcccccC-CCchhhHHHHHHHHhhCCcEEEeeccCCCCCCCCCchhhHHHHHHHHHHhcccccCCCCCCeEE
Q 019193 107 PVIIFFHGGSFAHSS-ANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIY 185 (344)
Q Consensus 107 p~vv~~HGGg~~~g~-~~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~~~i~ 185 (344)
=+|+|+|-..|..-. .+-..+......|-++ |+.|+.+. .++...-..|...-....++..= +.=
T Consensus 35 w~VLff~P~DFTfVCpTEi~af~~~y~eF~~~-g~eVigvS------------~Ds~fsH~aW~~~~~~~~gi~~i-~~P 100 (194)
T COG0450 35 WVVLFFYPADFTFVCPTEIIAFAKRYEEFQKR-GVEVIGVS------------TDSVFSHKAWKATIREAGGIGKI-KFP 100 (194)
T ss_pred EEEEEeccCCCCccCcchHHHHHhhhHHHHHc-CCEEEEEe------------cCcHHHHHHHHhcHHhcCCccce-ecc
Confidence 678889988876533 2333344445566666 99998775 24455556666552222234433 677
Q ss_pred EeeCCchHHHHHHHHHHhcccCCeeeEEEEeccc
Q 019193 186 LAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 219 (344)
Q Consensus 186 l~G~SaGG~lA~~~a~~~~~~~~~i~~~il~~p~ 219 (344)
++++..|- ++-.+....++.+..++|+.++.|-
T Consensus 101 miaD~~~~-vs~~ygvl~~~~g~a~R~~FIIDp~ 133 (194)
T COG0450 101 MIADPKGE-IARAYGVLHPEEGLALRGTFIIDPD 133 (194)
T ss_pred eEEcCchh-HHHHcCCcccCCCcceeEEEEECCC
Confidence 88888764 3333333445556688888888873
Done!