BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019196
(344 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 143/296 (48%), Gaps = 9/296 (3%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
V V VKA + + +YL G+YQ K PFVPG + +G V + P S K GD V F
Sbjct: 51 VVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSA-PEGSGIKPGDRVMAFN 109
Query: 100 ALGSFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 156
+G +A+ + ++ P P D A AL + T + A R QL +G+
Sbjct: 110 FIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAA 169
Query: 157 XXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
QI K GA +IAV +F+KS+G D V+ L E +V+E A
Sbjct: 170 GGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPL-EEGWAKAVRE---ATGG 225
Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
GVD++ DP+GG ++++ L ++LV+GFA+G IP I N L++N ++ G+ WG
Sbjct: 226 AGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGE 285
Query: 277 YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
+ L ++ L A+G+ +S SE A D KV GK+++
Sbjct: 286 FLRTHADYLYETQAGLEKLVAEGM-RPPVSARIPLSEGRQALQDFADGKVYGKMVL 340
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 148/363 (40%), Gaps = 54/363 (14%)
Query: 1 MEALVCRKLGDPTV-SIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
M A+V R G P V + D P EP P+ VRVR+KA +LN+ + G
Sbjct: 1 MRAVVMRARGGPEVLEVADLPVP------EPGPK-----EVRVRLKAAALNHLDVWVRKG 49
Query: 60 KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CGFAAL----------- 101
K PLP V G+D SG VDAVGP V F GD V CG
Sbjct: 50 VASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPR 109
Query: 102 ---------GSFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX 149
G++A+++V A+ P PK AAA+P+ F T+ +V + + G
Sbjct: 110 YQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDD 169
Query: 150 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
QI K+ GA +IA A +K++ K+LG D V+ ++ V+
Sbjct: 170 VLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRR 229
Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
KG D + D G + +K G +I + G +SG +P + ++
Sbjct: 230 LTGG---KGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSI 286
Query: 270 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
G S + L +L + +G + + A +E+R+V GK
Sbjct: 287 LGSTMAS---------KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGK 337
Query: 330 VMI 332
V++
Sbjct: 338 VVL 340
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 38/335 (11%)
Query: 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
M+A V ++LG P + P P+ V +RV+A LN+A++L LG
Sbjct: 1 MKAWVLKRLGGPLELVDL-----------PEPEAEEGEVV-LRVEAVGLNFADHLMRLGA 48
Query: 61 YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
Y + PF+PG + G V+ G G A+ + + P+P+
Sbjct: 49 YLTRLHPPFIPGMEVVGVVE-----------GRRYAALVPQGGLAERVAVPKGALLPLPE 97
Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAV 177
G AAA PV+F T+++AL RAQ G+ Q+ + G ++A
Sbjct: 98 GLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA 156
Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
A EK+ +LG + + +P +A+ G+D++ + V GK +ESL L
Sbjct: 157 ASRPEKLALPLALGAEEAATYAE---VPE-----RAKAWGGLDLVLE-VRGKEVEESLGL 207
Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
L G +++ IG A GE+ IP + +N V G +W + + ++E++L LL
Sbjct: 208 LAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLG-FWLTPLLREGALVEEALGFLLPRLG 266
Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
+ L + + + +EA AF A+ DR GKV++
Sbjct: 267 RELRPV-VGPVFPFAEAEAAFRALLDRGHTGKVVV 300
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 11/235 (4%)
Query: 30 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
PIP+ + V ++V A +N G Y KP LP+ PGSD +G ++AVG N S F
Sbjct: 53 PIPKDHQ---VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF 109
Query: 90 KVGDTVCGFAAL-GSFAQF-IVADQ--FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
K GD V + + G +A++ + AD + +P+ D AA+ + + T++ AL+H A +
Sbjct: 110 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK 169
Query: 146 SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
+G+ QI + G I+ A E K + G V + + I
Sbjct: 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYID 229
Query: 206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 260
+K+++ KG+D++ + + + L LL+ G +++V+G + G I + P +
Sbjct: 230 KIKKYVGE---KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG-SRGTIEINPRD 280
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 137/317 (43%), Gaps = 28/317 (8%)
Query: 30 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVP--GSDYSGTVDAVGPNVS 87
P+P + V VR +A +N + Q G Y PP P G + SG + VGP VS
Sbjct: 49 PLP-VAGEGEVLVRAEAIGVNRPDIAQRQGSY--PPPKDASPILGLELSGEIVGVGPGVS 105
Query: 88 NFKVGDTVCGFAALGSFAQFIV--ADQ-FPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 144
+ VGD VCG A G++A++ + A Q P PKG D + AAALP F T L A L
Sbjct: 106 GYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGL 165
Query: 145 SSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 204
+ G+ Q+ + GA + A A K + + LG ++ +E
Sbjct: 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSE--- 222
Query: 205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA-- 262
+KA +GVD++ D +G + ++ L + +I F G + N++
Sbjct: 223 -DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAV-AEKVNLSPI 280
Query: 263 LVKNWTVHGLYWGSYKIHRPHVLED--SLRELLL---WA--AKGLITIHISHTYSPSEAN 315
VK TV G RP E+ ++R+ LL W G + I ++ +
Sbjct: 281 XVKRLTVTG------STXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVA 334
Query: 316 LAFSAIEDRKVIGKVMI 332
A +E+ +GKV +
Sbjct: 335 DAHRLLEEGSHVGKVXL 351
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 140/319 (43%), Gaps = 33/319 (10%)
Query: 30 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ-EKPPLPFVPGSDYSGTVDAVGPNVSN 88
P+P + S + ++ K T +NY G Y EKP +V G + SGTV A G V+N
Sbjct: 29 PVPSI-SEEELLIKNKYTGVNYIESYFRKGIYPCEKP---YVLGREASGTVVAKGKGVTN 84
Query: 89 FKVGDTVCGFAALGSFAQFI-VADQFPV---PKGCD-----LLAAAALPVAFGTSHVALV 139
F+VGD V + + +FAQ+ ++ Q PV PKG L AA L V S
Sbjct: 85 FEVGDQVA-YISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEA 143
Query: 140 HRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS 199
+ + G Q+ K+ GA IAVA EK+K K G +++++ S
Sbjct: 144 Y--HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINAS 201
Query: 200 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP---- 255
E ++ V +F KGVD +D VG + SL L + G ASG IP
Sbjct: 202 KEDILRQVLKFTNG---KGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGLIPPFSI 258
Query: 256 --VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 313
+ P NI LV+ ++G I P + E + I I TY +
Sbjct: 259 TRLSPKNITLVRP-QLYGY------IADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRD 311
Query: 314 ANLAFSAIEDRKVIGKVMI 332
A + IE RK +GK+++
Sbjct: 312 YRTAAADIESRKTVGKLVL 330
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 139/350 (39%), Gaps = 49/350 (14%)
Query: 13 TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
TV+ HD K P+P+ + VR A SLNY + L + PFVP
Sbjct: 35 TVAPHDLKL-----AERPVPEAGEHDII-VRTLAVSLNYRDKLVLETGXGLDLAFPFVPA 88
Query: 73 SDYSGTVDAVGPNVSNFKVGDTV------------------------CGFAALGSFAQFI 108
SD SG V+AVG +V+ F+ GD V G A G ++++
Sbjct: 89 SDXSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYV 148
Query: 109 VADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQ 165
V + PK D A+ LP A T+ ALV + L +G Q
Sbjct: 149 VLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGD-RVVVQGTGGVALFGLQ 207
Query: 166 IGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 225
I K GA +I + EK+ +LG DH ++ E + V R G D + +
Sbjct: 208 IAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDR---GADHILEI 264
Query: 226 VGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL 285
GG +SLK + +I VIG G P L+K+ V G+ G HR L
Sbjct: 265 AGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVG----HR-RAL 319
Query: 286 EDSLRELLLWAAKGLITIHISHTYSPSE-ANLAFSAIEDRKVIGKVMIAF 334
ED + + K +I T P A+L DR GKV+I F
Sbjct: 320 EDLVGAVDRLGLKPVIDXRYKFTEVPEALAHL------DRGPFGKVVIEF 363
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 145/337 (43%), Gaps = 30/337 (8%)
Query: 16 IHDEKSPIVLSK-TEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QEKPPLPFVPGS 73
+ + P VL K P P + V V+++A+ N + G+ + PLP + G
Sbjct: 13 VEEANGPFVLRKLARPQP---APGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGX 69
Query: 74 DYSGTVDAVGPNVSNFKVGDTVCGFAA-----LGSFAQFIVADQFPV---PKGCDLLAAA 125
D +GTV AVGP V +F+VGD V G G+ AQF D + P A+
Sbjct: 70 DLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTXRQAS 129
Query: 126 ALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIK 185
LP+ F T+ LV RAQ+ GQ QI GA + A ARG++ ++
Sbjct: 130 VLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSD-LE 188
Query: 186 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL-NWGAQI 244
+++ LG +D S E + + +G D++YD +GG + S + +G +
Sbjct: 189 YVRDLGATP-IDASREPEDYAAEHTAG----QGFDLVYDTLGGPVLDASFSAVKRFGHVV 243
Query: 245 LVIGFASGEIPVIPANIALVKN-WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI 303
+G+ + ++ + A +T+H L H + LRE G +
Sbjct: 244 SCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAH----FGEXLREADALVQTGKLAP 299
Query: 304 HIS-HTYSPSEANLAFSAIEDRKVI----GKVMIAFD 335
+ T+S +E A+ A+ R + GK+ I +
Sbjct: 300 RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 149/335 (44%), Gaps = 45/335 (13%)
Query: 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
M+A V ++LG P + P P+ V +RV+A LN+A++L LG
Sbjct: 1 MKAWVLKRLGGPLELVDL-----------PEPEAEEGEVV-LRVEAVGLNFADHLMRLGA 48
Query: 61 YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
Y + PF+PG + G V+ G G A+ + + P+P+
Sbjct: 49 YLTRLHPPFIPGMEVVGVVE-----------GRRYAALVPQGGLAERVAVPKGALLPLPE 97
Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAV 177
G AAA PV+F T+++AL RAQ G+ Q+ + G ++A
Sbjct: 98 GLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA 156
Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
A EK+ +LG + + +P +A+ G+D++ + V GK +ESL L
Sbjct: 157 ASRPEKLALPLALGAEEAATYAE---VPE-----RAKAWGGLDLVLE-VRGKEVEESLGL 207
Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
L G +++ I P+ P + + +N V G +W + + ++E++L LL
Sbjct: 208 LAHGGRLVYIA------PIPPLRL-MRRNLAVLG-FWLTPLLREGALVEEALGFLLPRLG 259
Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
+ L + + + +EA AF A+ DR GKV++
Sbjct: 260 RELRPV-VGPVFPFAEAEAAFRALLDRGHTGKVVV 293
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 134/321 (41%), Gaps = 20/321 (6%)
Query: 22 PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVP---GSDYSGT 78
P VL + P+ AV VR KA LN+ + G Y P PF+P G++ +G
Sbjct: 13 PEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLY----PAPFLPSGLGAEGAGV 68
Query: 79 VDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQFPVPKGCDLLA---AAALPVAFGTS 134
V+AVG V+ FKVGD V G LG++++ V + + K D ++ AAAL + T
Sbjct: 69 VEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTV 128
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
L Q+ G+ Q K GA +I EK K+LG
Sbjct: 129 QYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE 188
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI 254
+D S+E V V E +K V+YD VG SL + + LV+ F +
Sbjct: 189 TIDYSHEDVAKRVLELTDGKKCP---VVYDGVGQDTWLTSLDSV--APRGLVVSFGNASG 243
Query: 255 PVIPANIALV---KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSP 311
PV N+ ++ + V GSY + L+ EL A G + + Y+
Sbjct: 244 PVSGVNLGILAQKDSVYVTRPTLGSYA-NNAQNLQTMADELFDMLASGKLKVDGIEQYAL 302
Query: 312 SEANLAFSAIEDRKVIGKVMI 332
+A A + R+ G ++
Sbjct: 303 KDAAKAQIELSARRTTGSTIL 323
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 27/306 (8%)
Query: 30 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
P P+ V +RV+A LN+A++L LG Y + PF+PG + G V+
Sbjct: 19 PEPEAEEGEVV-LRVEAVGLNFADHLXRLGAYLTRLHPPFIPGXEVVGVVEG-------- 69
Query: 90 KVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 146
G A+ + + P+P+G AAA PV+F T+++AL RAQ
Sbjct: 70 ---RRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLAL-KRAQARP 125
Query: 147 GQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 206
G+ Q+ + G ++A A EK+ +LG + + +P
Sbjct: 126 GEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLALPLALGAEEAATYAE---VPE 182
Query: 207 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKN 266
+A+ G+D++ + V GK +ESL LL G +++ IG A GE+ IP +N
Sbjct: 183 -----RAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLXRRN 236
Query: 267 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKV 326
V G +W + + ++E++L LL + L + + + +EA AF A+ DR
Sbjct: 237 LAVLG-FWLTPLLREGALVEEALGFLLPRLGRELRPV-VGPVFPFAEAEAAFRALLDRGH 294
Query: 327 IGKVMI 332
GKV++
Sbjct: 295 TGKVVV 300
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 114/264 (43%), Gaps = 16/264 (6%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GF 98
VRV++ A +N ++ I G Y P LP V G++ V AVG NV+ K GD V
Sbjct: 44 VRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPAN 103
Query: 99 AALGSF---AQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 155
A LG++ A F VP L +AA L V T++ L+ QL G
Sbjct: 104 AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS 163
Query: 156 XXXXXXXXXQIGKVCGATIIAVARGAEKIK----FLKSLGVDHVVDLSNESVIPSVKEFL 211
QI G I V R I+ LKSLG +HV+ E P +K F
Sbjct: 164 NSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVIT-EEELRRPEMKNFF 222
Query: 212 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 271
K + + + VGGK + E L+ L G ++ G + + V ++ + K+ + G
Sbjct: 223 K--DMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRG 280
Query: 272 LYWGSYKI-HRPHVLEDSLRELLL 294
+ +K H P D +EL+L
Sbjct: 281 FWLSQWKKDHSP----DQFKELIL 300
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 114/264 (43%), Gaps = 16/264 (6%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GF 98
VRV++ A +N ++ I G Y P LP V G++ V AVG NV+ K GD V
Sbjct: 57 VRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPAN 116
Query: 99 AALGSF---AQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 155
A LG++ A F VP L +AA L V T++ L+ QL G
Sbjct: 117 AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS 176
Query: 156 XXXXXXXXXQIGKVCGATIIAVARGAEKIK----FLKSLGVDHVVDLSNESVIPSVKEFL 211
QI G I V R I+ LKSLG +HV+ E P +K F
Sbjct: 177 NSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVIT-EEELRRPEMKNFF 235
Query: 212 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 271
K + + + VGGK + E L+ L G ++ G + + V ++ + K+ + G
Sbjct: 236 K--DMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRG 293
Query: 272 LYWGSYKI-HRPHVLEDSLRELLL 294
+ +K H P D +EL+L
Sbjct: 294 FWLSQWKKDHSP----DQFKELIL 313
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 125/286 (43%), Gaps = 29/286 (10%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
+ + LS+ P+P L + VR + +N ++ G+Y PF G + G V
Sbjct: 45 REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 103
Query: 80 DAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQ---FPVPK-GCDLLAAAALPVAFGTS 134
A+G + S + VG V + A GSFA++ V PVP + L L V+ T+
Sbjct: 104 VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 159
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
+++L LS G+ Q+ K +I EK FLKSLG D
Sbjct: 160 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 219
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 253
++ E V LK +GVDV+Y+ VGG + ++ L +++VIGF SG +
Sbjct: 220 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 275
Query: 254 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 286
P +PA + L K+ +V G Y Y+ H+LE
Sbjct: 276 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 320
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
+ + LS+ P+P L + VR + +N ++ G+Y PF G + G V
Sbjct: 37 REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 95
Query: 80 DAVGPNVS-NFKVGDTVCGFAALGSFAQFIV---ADQFPVPK-GCDLLAAAALPVAFGTS 134
A+G + S + VG V + A GSFA++ V + PVP + L L V+ T+
Sbjct: 96 VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 151
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
+++L LS G+ Q+ K +I EK FLKSLG D
Sbjct: 152 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 211
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 253
++ E V LK +GVDV+Y+ VGG + ++ L +++VIGF SG +
Sbjct: 212 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 267
Query: 254 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 286
P +PA + L K+ +V G Y Y+ H+LE
Sbjct: 268 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 312
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 125/286 (43%), Gaps = 29/286 (10%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
+ + LS+ P+P L + VR + +N ++ G+Y PF G + G V
Sbjct: 16 REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 74
Query: 80 DAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQ---FPVPK-GCDLLAAAALPVAFGTS 134
A+G + S + VG V + A GSFA++ V PVP + L L V+ T+
Sbjct: 75 VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 130
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
+++L LS G+ Q+ K +I EK FLKSLG D
Sbjct: 131 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 190
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 253
++ E V LK +GVDV+Y+ VGG + ++ L +++VIGF SG +
Sbjct: 191 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 246
Query: 254 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 286
P +PA + L K+ +V G Y Y+ H+LE
Sbjct: 247 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 291
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 131/337 (38%), Gaps = 44/337 (13%)
Query: 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVG 83
+ K P PQ +++RVKA LN+ + + G P P VPG + SG V+A+G
Sbjct: 20 LFRKAMPEPQ---DGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALG 76
Query: 84 PNVSNFKVGDTVCGFAALGSFAQFI---VADQFPVPKGCDLLAAAALPVAFGTSHVALVH 140
+V +++GD V F ++A+ + V + +P AAA P+ F T++V L
Sbjct: 77 DSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFE 136
Query: 141 RAQLSSGQXXXXXXXXXXXXXXXXQI-GKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS 199
A L G Q+ V T+ A + S V H+ D
Sbjct: 137 VANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDS--VTHLFD-R 193
Query: 200 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPA 259
N + VK +GVD++ D + G T + L LL ++ G ++ +
Sbjct: 194 NADYVQEVKRI----SAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKS 249
Query: 260 NIALVKNWTVHGLYWGSYKIHRPHVLED-------SLRELLLWAAKG---------LITI 303
+ K+W W K++ + E+ SL LL + LI +
Sbjct: 250 FFSFAKSW------WQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGL 303
Query: 304 HISHTYSP--------SEANLAFSAIEDRKVIGKVMI 332
+ P E A I DR IGK+++
Sbjct: 304 YNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLIL 340
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 30/311 (9%)
Query: 41 RVRVKATSLNYANYLQILGKYQEKPPL-----PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
+VR++ T++ N+L + PL P V G + + V+ VGP V++F VG+ V
Sbjct: 30 QVRLRNTAIG-VNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERV 88
Query: 96 CG-FAALGSFAQ---FIVADQFPVPKGCDL--LAAAALPVAFGTSHVALVHRAQLSSGQX 149
C LG+++Q + VPK DL + A L + T+ L ++ G
Sbjct: 89 CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDY 148
Query: 150 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
+ GAT+I EK + + LG H ++ S + V+E
Sbjct: 149 VLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVRE 208
Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
KGVDV+YD +G ++SL L G ASG + I +V++ V
Sbjct: 209 ITGG---KGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASG----VADPIRVVEDLGV 261
Query: 270 HG-------LYWGSYKIHRPHVLEDSLRELLLWAAK-GLITIHISHTYSPSEANLAFSAI 321
G W Y +R + E S + L A K G++ ++ T+ EA A +
Sbjct: 262 RGSLFITRPALW-HYMSNRSEIDEGS--KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYM 318
Query: 322 EDRKVIGKVMI 332
R+ IG +++
Sbjct: 319 GGRQTIGSIVL 329
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
VR+ ++A +N+ + L LG Y L GS+ +G V GP V+ GD V G
Sbjct: 241 VRIAMRAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDRVMGMI 296
Query: 100 ALGSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 156
+F VAD V P G AA++P+ F T++ ALV A L G+
Sbjct: 297 P-KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAA 355
Query: 157 XXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS-----VKEFL 211
Q+ + GA + A A + K+ V+LS E + S ++FL
Sbjct: 356 GGVGMAAIQLARHLGAEVYATA---SEDKW-------QAVELSREHLASSRTCDFEQQFL 405
Query: 212 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV 256
A +GVDV+ + + G+ SL++L G + L +G PV
Sbjct: 406 GATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPV 450
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 10 GDPTVSIHDEK--SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL 67
G P +++H +K P L E V ++V A++LN A+ +Q G+Y P
Sbjct: 4 GIPMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA 63
Query: 68 PFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLA 123
+ G + SG V +GP ++K+GDT G AQ++ + P+P+G L
Sbjct: 64 SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQ 123
Query: 124 AAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEK 183
AAA+P A+ T+ L + +G Q+ ++ GA + A +K
Sbjct: 124 AAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK 183
Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 243
++ + LG + E + +F K GV+++ D +GG ++++ L +
Sbjct: 184 LQMAEKLGAAAGFNYKKEDFSEATLKFTKG---AGVNLILDCIGGSYWEKNVNCLALDGR 240
Query: 244 ILVIGFASG 252
++ G G
Sbjct: 241 WVLYGLMGG 249
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGF 98
V ++V A++LN A+ +Q G+Y P + G + SG V +GP ++K+GDT
Sbjct: 52 VLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMAL 111
Query: 99 AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 155
G AQ++ + P+P+G L AAA+P A+ T+ L + +G
Sbjct: 112 LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAG 171
Query: 156 XXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 215
Q+ ++ GA + A +K++ + LG + E + +F K
Sbjct: 172 LSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKG-- 229
Query: 216 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 252
GV+++ D +GG ++++ L + ++ G G
Sbjct: 230 -AGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGG 265
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 128/334 (38%), Gaps = 23/334 (6%)
Query: 8 KLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL 67
K G+P + E I EP+ V VR+ +N ++ + I G Y + PL
Sbjct: 12 KFGNPKDVLQVEYKNI-----EPL----KDNEVFVRMLVRPINPSDLIPITGAYAHRIPL 62
Query: 68 PFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAA 124
P +PG + G V+ VG VS +G V G++ +++ P+P D A
Sbjct: 63 PNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTA 122
Query: 125 AALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKI 184
A + + T+ V L Q+ ++ +IAV R +
Sbjct: 123 AQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT 182
Query: 185 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQI 244
+ L LG +V+D S + +V E G D D +GG E L
Sbjct: 183 EELLRLGAAYVIDTSTAPLYETVMELTNG---IGADAAIDSIGGPDGNELAFSLRPNGHF 239
Query: 245 LVIGFASGEIPVIPANI---ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL-LWAAKGL 300
L IG SG I V A I A V H +W P+ +++ R L+ L + L
Sbjct: 240 LTIGLLSG-IQVNWAEIVTKAKVHANIFHLRHWNDEV--SPYKWQETFRHLIRLVENEQL 296
Query: 301 ITIHISHTYSPSEANLAFSAIED-RKVIGKVMIA 333
+ + TY ++ A ++ K GKV +
Sbjct: 297 RFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLT 330
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 88 NFKVGDTVCGFAALGSFAQFIVA---------DQFPVPKGCDLLAAAALPVAFGTSHVAL 138
F+ GD V G ALG FI + P+P+ L + T++ AL
Sbjct: 89 GFQAGDYVNG--ALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGM-----TAYFAL 141
Query: 139 VHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVD 197
+ Q +G+ QI ++ G ++ +A GAEK +FL + LG D +D
Sbjct: 142 LDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAID 201
Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGE 253
NE + LK KG+DV +D VGG++ L + + A+I++ G + + E
Sbjct: 202 YKNEDLAAG----LKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKE 257
Query: 254 IPVIPANI--ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG 299
PAN LV + G+ Y P + L+E+ W A+G
Sbjct: 258 AVRGPANYLSLLVNRARMEGMVVMDYAQRFP----EGLKEMATWLAEG 301
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 132/334 (39%), Gaps = 28/334 (8%)
Query: 14 VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS 73
+ H P VL E P + ++V KA +N+ + G Y P LP G+
Sbjct: 5 IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLY-PPPSLPSGLGT 63
Query: 74 DYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQF--IVADQFPV-PKGCDLLAAAALPV 129
+ +G V VG V + K GD V +ALG+++ I+AD+ + P AAA +
Sbjct: 64 EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL 123
Query: 130 AFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKS 189
T + L ++ + Q K GA +I A+K +
Sbjct: 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183
Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 249
G V++ E ++ +KE +K++ V+YD VG + SL L ++ G
Sbjct: 184 AGAWQVINYREEDLVERLKEITGGKKVR---VVYDSVGRDTWERSLDCLQRRGLMVSFGN 240
Query: 250 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV---------LEDSLRELLLWAAKGL 300
+SG + + I K GS + RP + L ++ EL A G+
Sbjct: 241 SSGAVTGVNLGILNQK---------GSLYVTRPSLQGYITTREELTEASNELFSLIASGV 291
Query: 301 ITIHIS--HTYSPSEANLAFSAIEDRKVIGKVMI 332
I + ++ Y +A A +E R G ++
Sbjct: 292 IKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 131/322 (40%), Gaps = 51/322 (15%)
Query: 30 PIPQLNSSTAVRVRVKATSLNYANYLQILGK----YQEKPPLPFVPGSDYSGTVDAVGPN 85
P P+ + + ++V A SLN +Y G + K LP G D+SG V +G +
Sbjct: 27 PTPEYRKNQXL-IKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSD 85
Query: 86 VSNFKVGDTVCGFAAL----GSFAQFIVADQFPVPKGCD---LLAAAALPVAFGTSHVAL 138
V+N +GD V G A +A+++ A + + + L AA+LP A G + +
Sbjct: 86 VNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTA-GLTALQA 144
Query: 139 VHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL 198
+++A++ G Q+ K G T+I A FLK+LG + ++
Sbjct: 145 LNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINY 203
Query: 199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP 258
E + ++ VD + D VGG + +S+ L I+ +P I
Sbjct: 204 HEEDFLLAIS--------TPVDAVIDLVGGDVGIQSIDCLKETGCIV-------SVPTIT 248
Query: 259 A----NIALVKNWTVHGLYWGSYKIHRPHVL-----EDSLRELLLWAAKGLITIHISHTY 309
A +A K+ GL + I H L ED LR I IS +
Sbjct: 249 AGRVIEVAKQKHRRAFGL-LKQFNIEELHYLGKLVSEDKLR------------IEISRIF 295
Query: 310 SPSEANLAFSAIEDRKVIGKVM 331
SEA A +E V GK++
Sbjct: 296 QLSEAVTAHELLETGHVRGKLV 317
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 52/349 (14%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
K P+ + + E P + S V VR+KA + + + G + KP LP +PG + G V
Sbjct: 10 KEPLKIKEVEK-PTI-SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIV 67
Query: 80 DAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQFIVAD 111
+ VGP V++ KVGD T+C G++ G +A++ A
Sbjct: 68 EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK 168
+P AA + A T++ AL + + Q K
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKAL--KVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 169 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
G ++AV G EK++ K LG D VV+ E +KE + V + P
Sbjct: 186 AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA-- 243
Query: 229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
+ + + G +++G E+P IP ++ + G G+ K
Sbjct: 244 --FQSAYNSIRRGGACVLVGLPPEEMP-IPIFDTVLNGIKIIGSIVGTRK---------D 291
Query: 289 LRELLLWAAKGLITIHISHTYSPSEA-NLAFSAIEDRKVIGKVMIAFDD 336
L+E L +AA+G + I P E N F + ++ G+V++ +D
Sbjct: 292 LQEALQFAAEGKVKTIIE--VQPLEKINEVFDRMLKGQINGRVVLTLED 338
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 52/349 (14%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
K P+ + + E P + S V VR+KA + + + G + KP LP +PG + G V
Sbjct: 10 KEPLKIKEVEK-PTI-SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIV 67
Query: 80 DAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQFIVAD 111
+ VGP V++ KVGD T+C G++ G +A++ A
Sbjct: 68 EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK 168
+P AA + A T++ AL + + Q K
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKAL--KVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 169 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
G ++AV G EK++ K LG D VV+ E +KE + V + P
Sbjct: 186 AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA-- 243
Query: 229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
+ + + G +++G E+P IP ++ + G G+ K
Sbjct: 244 --FQSAYNSIRRGGACVLVGLPPEEMP-IPIFDTVLNGIKIIGSIVGTRK---------D 291
Query: 289 LRELLLWAAKGLITIHISHTYSPSEA-NLAFSAIEDRKVIGKVMIAFDD 336
L+E L +AA+G + I P E N F + ++ G+V++ +D
Sbjct: 292 LQEALQFAAEGKVKTIIE--VQPLEKINEVFDRMLKGQINGRVVLTLED 338
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 142/354 (40%), Gaps = 54/354 (15%)
Query: 16 IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGS 73
+H+ P+ + + P+L V VR+ + + + + G + E +P LP+ G
Sbjct: 21 LHEYNKPLRIEDVD-YPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGH 79
Query: 74 DYSGTVDAVGPNVSNFKVGDTV---------------------C------GFAALGSFAQ 106
+ G ++ V V + GD V C G G FA+
Sbjct: 80 ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAE 139
Query: 107 FIVADQFPV---PKGCD---LLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXX 160
F+ V PK L+ A L A T++ A+ A+
Sbjct: 140 FMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLG 199
Query: 161 XXXXQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV 219
Q+ KV AT+IA+ EK+K + LG DHVVD + VK+ ++ + +GV
Sbjct: 200 HIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD----PVKQVMELTRGRGV 255
Query: 220 DVLYDPVGGKLTKE-SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK 278
+V D VG + T + + LL +++++G+ GE+ P + + G G+Y
Sbjct: 256 NVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELR-FPTIRVISSEVSFEGSLVGNYV 313
Query: 279 IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
L EL+ A +G + + + + E N +E +V+G+ ++
Sbjct: 314 ---------ELHELVTLALQGKVRVEVD-IHKLDEINDVLERLEKGEVLGRAVL 357
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 19/137 (13%)
Query: 13 TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
TV+ HDE + + P P L V VRV+A ++N ++ ++ G++ P F+ G
Sbjct: 16 TVNDHDE---VTVWNAAPCPMLPRD-QVYVRVEAVAINPSD-TKMRGQFAT--PWAFL-G 67
Query: 73 SDYSGTVDAVGPNVSNFKVGDTVCG--------FAALGSFAQFIVAD---QFPVPKGCDL 121
+DY+GTV AVG +V++ +VGD V G G+F+Q+ V +PKG
Sbjct: 68 TDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSF 127
Query: 122 LAAAALPVAFGTSHVAL 138
AAALP T+ +A+
Sbjct: 128 EQAAALPAGISTAGLAM 144
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 17 HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPL-------- 67
H E ++ +++ I N + V V+ + +N ++ QI G Y KP
Sbjct: 34 HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAE 93
Query: 68 PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
P P G++ V VG NVS+ + GD V F ALG+ FI +
Sbjct: 94 PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 153
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
P G + A + V T+++ L H +L+ G+ QIGK+
Sbjct: 154 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 213
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
I+V R E + LK LG V+ D +N P++KE++K + L
Sbjct: 214 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGGEAKLAL- 272
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
+ VGGK + + LN +L G S + IP ++ + KN+T G + +
Sbjct: 273 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 332
Query: 284 VLEDSLRELLLWAAKGLIT 302
+ +L +++ W +G +T
Sbjct: 333 LKTSTLNQIIAWYEEGKLT 351
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 17 HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPL-------- 67
H E ++ +++ I N + V V+ + +N ++ QI G Y KP
Sbjct: 12 HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAE 71
Query: 68 PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
P P G++ V VG NVS+ + GD V F ALG+ FI +
Sbjct: 72 PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
P G + A + V T+++ L H +L+ G+ QIGK+
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
I+V R E + LK LG V+ D +N P++KE++K + +
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGGE-AKLAL 250
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
+ VGGK + + LN +L G S + IP ++ + KN+T G + +
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 284 VLEDSLRELLLWAAKGLIT 302
+ +L +++ W +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 13 TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
TV+ HDE + + P P L V VRV+A ++N ++ + G++ P F+ G
Sbjct: 16 TVNDHDE---VTVWNAAPCPMLPRD-QVYVRVEAVAINPSD-TSMRGQFAT--PWAFL-G 67
Query: 73 SDYSGTVDAVGPNVSNFKVGDTVCGFAA--------LGSFAQFIVAD---QFPVPKGCDL 121
+DY+GTV AVG +V++ +VGD V G G+F+Q+ V +PKG
Sbjct: 68 TDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSF 127
Query: 122 LAAAALPVAFGTSHVAL 138
AAALP T+ +A+
Sbjct: 128 EQAAALPAGISTAGLAM 144
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 17 HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKP--------PL 67
H E ++ +++ I N + V V+ + +N ++ QI G Y KP
Sbjct: 34 HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTE 93
Query: 68 PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
P P G++ V VG NVS+ + GD V F ALG+ FI +
Sbjct: 94 PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 153
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
P G + A + V T+++ L H +L+ G+ QIGK+
Sbjct: 154 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 213
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
I+V R E + LK LG V+ D +N P++KE++K + L
Sbjct: 214 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLAL- 272
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
+ VGGK + + LN +L G S + IP ++ + KN+T G + +
Sbjct: 273 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 332
Query: 284 VLEDSLRELLLWAAKGLIT 302
+ +L +++ W +G +T
Sbjct: 333 LKTSTLNQIIAWYEEGKLT 351
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 17 HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKP--------PL 67
H E ++ +++ I N + V V+ + +N ++ QI G Y KP
Sbjct: 12 HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTE 71
Query: 68 PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
P P G++ V VG NVS+ + GD V F ALG+ FI +
Sbjct: 72 PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
P G + A + V T+++ L H +L+ G+ QIGK+
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
I+V R E + LK LG V+ D +N P++KE++K + +
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE-AKLAL 250
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
+ VGGK + + LN +L G S + IP ++ + KN+T G + +
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 284 VLEDSLRELLLWAAKGLIT 302
+ +L +++ W +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 133 TSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGV 192
T++ L+ + G+ QI K+ G ++ A EKI +LK +G
Sbjct: 132 TAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF 191
Query: 193 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS- 251
D N + S++E LK G D +D VGG+ L + +I + G S
Sbjct: 192 DAAF---NYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISV 248
Query: 252 ----GEIPVIPANIALV-KNWTVHGLYWGSYKIHRPH--VLEDSLRELLLWAAKGLITIH 304
++P P+ +++ K + G + ++R V E +LR+L+ W +G I H
Sbjct: 249 YNRMDQLPPGPSPESIIYKQLRIEG-----FIVYRWQGDVREKALRDLMKWVLEGKIQYH 303
Query: 305 ISHTYSPSEANLAFSAIEDRKVIGKVMI 332
T AF + + +GK ++
Sbjct: 304 EHVTKGFENMPAAFIEMLNGANLGKAVV 331
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 129/324 (39%), Gaps = 55/324 (16%)
Query: 16 IHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD 74
+H +P+ + + + P+P V V+++A+ + + + G + KPPLPF+PG +
Sbjct: 12 VHAYGAPLRIEEVKVPLP---GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHE 68
Query: 75 YSGTVDAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQ 106
G V AVG V+ K GD T+C G++ G +A+
Sbjct: 69 GVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAE 128
Query: 107 FIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXX 163
+++AD V PK + A + A T + L + GQ
Sbjct: 129 YVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGL-KQTNARPGQ-WVAISGIGGLGHVA 186
Query: 164 XQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV-DVL 222
Q + G + A+ K++ + LG V+ E + +++ R + G VL
Sbjct: 187 VQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQ-----RDIGGAHGVL 241
Query: 223 YDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP 282
V +++ + G I ++G G+ P P ++K + G G+
Sbjct: 242 VTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPT-PIFDVVLKGLHIAGSIVGTRA---- 296
Query: 283 HVLEDSLRELLLWAAKGLI--TIH 304
L+E L +A +GL+ TIH
Sbjct: 297 -----DLQEALDFAGEGLVKATIH 315
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 131/319 (41%), Gaps = 34/319 (10%)
Query: 17 HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKP--------PL 67
H E ++ +++ I N + V V+ + +N ++ QI G KP
Sbjct: 12 HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKTTGFGTTE 71
Query: 68 PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
P P G++ V VG NVS+ + GD V F ALG+ FI +
Sbjct: 72 PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
P G + A + V T+++ L H +L+ G+ QIGK+
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
I+V R E + LK LG V+ D +N P++KE++K + +
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE-AKLAL 250
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
+ VGGK + + LN +L G S + IP ++ + KN+T G + +
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 284 VLEDSLRELLLWAAKGLIT 302
+ +L +++ W +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 141/365 (38%), Gaps = 60/365 (16%)
Query: 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
M+A V R G +P+ + + P+PQ V+V+++A+ + + + G
Sbjct: 3 MKAAVVRAFG----------APLTIDEV-PVPQPGPGQ-VQVKIEASGVCHTDLHAADGD 50
Query: 61 YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD----------------------TVC-- 96
+ KP LPF+PG + G V AVG VS K GD T+C
Sbjct: 51 WPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK 110
Query: 97 ----GFAALGSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX 149
G++ G + +++VAD V P + A + A T + L GQ
Sbjct: 111 QQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-KVTDTRPGQ- 168
Query: 150 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
Q + G + AV K+ + LG + V+ + P+
Sbjct: 169 WVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTD--PAA-- 224
Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
+L+ VL V K +++ ++ G I + G G+ P ++K T+
Sbjct: 225 WLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGT-PIFDVVLKGITI 283
Query: 270 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
G G+ L+E L +AA G + +S T + N F + + KV G+
Sbjct: 284 RGSIVGT---------RSDLQESLDFAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGR 333
Query: 330 VMIAF 334
V++ F
Sbjct: 334 VVLDF 338
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 22/199 (11%)
Query: 16 IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPF---VPG 72
I D+ S + + +P P + + V VKA S+N +Y + PP V G
Sbjct: 34 ITDDASLLDIELPKPAP---AGHDILVEVKAVSVNPVDY----KVRRSTPPDGTDWKVIG 86
Query: 73 SDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQFPV---PKGCDLLAAAA 126
D +G V AVGP+V+ F+ GD V ++ G+ A+F + D+ V PK D AAA
Sbjct: 87 YDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAA 146
Query: 127 LPVAFGTSHVALVHRAQLS-----SGQXXXXXXXXXXXXXXXXQIGKV-CGATIIAVARG 180
LP+ T+ A R ++ + QI + T+IA A
Sbjct: 147 LPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASR 206
Query: 181 AEKIKFLKSLGVDHVVDLS 199
E +++KSLG HV+D S
Sbjct: 207 PETQEWVKSLGAHHVIDHS 225
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 113/303 (37%), Gaps = 46/303 (15%)
Query: 30 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
P P+ N + + VK + + + + G + LP V G + +G V +G NV +
Sbjct: 26 PKPKANE---LLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGW 82
Query: 90 KVGD----------------------------TVCGFAALGSFAQFIVADQFP---VPKG 118
K+GD + G+ GSF Q+ AD +P+G
Sbjct: 83 KIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQG 142
Query: 119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVA 178
DL A + A T + AL A L +G Q K G ++ +
Sbjct: 143 TDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGID 201
Query: 179 RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL 238
G K + +S+G + +D + E I V LKA V+ V + S + +
Sbjct: 202 GGEGKEELFRSIGGEVFIDFTKEKDI--VGAVLKATDGGAHGVINVSVSEAAIEASTRYV 259
Query: 239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK 298
+++G +G +VK+ ++ G Y G+ RE L + A+
Sbjct: 260 RANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN---------RADTREALDFFAR 310
Query: 299 GLI 301
GL+
Sbjct: 311 GLV 313
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 136/365 (37%), Gaps = 62/365 (16%)
Query: 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
M+A V R G P L+ E PIPQ ++V ++A+ + + + G
Sbjct: 26 MKAAVVRAFGKP------------LTIDEVPIPQPGPGQ-IQVAIQASGVCHTDLHAAEG 72
Query: 60 KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD----------------------TVC- 96
+ KP PF+PG + G V AVG V + K GD T+C
Sbjct: 73 DWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE 132
Query: 97 -----GFAALGSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 148
G++ G FA+++VAD V PK D A + A T + L + +
Sbjct: 133 EQLNTGYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGL--KVTDTKPG 190
Query: 149 XXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
Q + G + AV K+ + LG V N +
Sbjct: 191 DWVVISGIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTV---NAKTVADPA 247
Query: 209 EFLKARKLKGVD-VLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNW 267
+++ G VL V K +++L ++ G + + G G+ P+ N+ L
Sbjct: 248 AYIRKETDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVL-NGV 306
Query: 268 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 327
TV G G+ L+E L +AA G + I T + N F + +
Sbjct: 307 TVRGSIVGTRL---------DLQESLDFAADGKVKATI-QTGKLEDINAIFDDMRQGNIE 356
Query: 328 GKVMI 332
G++++
Sbjct: 357 GRIVM 361
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 111/306 (36%), Gaps = 68/306 (22%)
Query: 67 LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
LP G + +G ++ VG V + GD V C + +G
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQFP-VPKGCDLLAAAALPVAF-GTSHVALVHRAQLSSGQXXXXXXXXX 157
++A++++ + + K L A A P+ G + V +A L +
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGG 181
Query: 158 XXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
QI K V GATII V E ++ K G D+V++ S + + ++ ++
Sbjct: 182 GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES--- 238
Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
KGVD + D LN+ + L V P +A + + GL+
Sbjct: 239 KGVDAVID-------------LNYSEKTL---------SVYPKALAKQGKYVMVGLFGAD 276
Query: 277 YKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED 323
H P + + ++ A G + I+ T EAN A +E+
Sbjct: 277 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLEN 336
Query: 324 RKVIGK 329
K IG+
Sbjct: 337 FKAIGR 342
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 111/306 (36%), Gaps = 68/306 (22%)
Query: 67 LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
LP G + +G ++ VG V + GD V C + +G
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQFP-VPKGCDLLAAAALPVAF-GTSHVALVHRAQLSSGQXXXXXXXXX 157
++A++++ + + K L A A P+ G + V +A L +
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGG 181
Query: 158 XXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
QI K V GATII V E ++ K G D+V++ S + + ++ ++
Sbjct: 182 GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES--- 238
Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
KGVD + D LN+ + L V P +A + + GL+
Sbjct: 239 KGVDAVID-------------LNYSEKTL---------SVYPKALAKQGKYVMVGLFGAD 276
Query: 277 YKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED 323
H P + + ++ A G + I+ T EAN A +E+
Sbjct: 277 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLEN 336
Query: 324 RKVIGK 329
K IG+
Sbjct: 337 FKAIGR 342
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 115/317 (36%), Gaps = 68/317 (21%)
Query: 22 PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81
P+ + + E P + VR+++ ATSL + + I K+ E P + G + +G V++
Sbjct: 22 PLCIEEVEVAPP--KAHEVRIQIIATSLCHTDATVIDSKF-EGLAFPVIVGHEAAGIVES 78
Query: 82 VGPNVSNFKVGDTV---------------------CG----------------------- 97
+GP V+N K GD V CG
Sbjct: 79 IGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFT 138
Query: 98 --------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSS 146
F +F+Q+ V + K +L L F T + A ++ A+++
Sbjct: 139 CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTP 198
Query: 147 GQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 206
G + II + +EK K+LG L+ +
Sbjct: 199 GSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDC--LNPRDLHKP 256
Query: 207 VKEFLKARKLKGVDVLYDPVGGKLTKES---LKLLNWGAQILVIGFASGE--IPVIPANI 261
++E + GVD D GG T ++ WG+ IG A+G + V P
Sbjct: 257 IQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTF-IGVAAGSKGLTVFPEE- 314
Query: 262 ALVKNWTVHGLYWGSYK 278
L+ T++G ++G +K
Sbjct: 315 -LIIGRTINGTFFGGWK 330
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 90/234 (38%), Gaps = 30/234 (12%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-- 97
V VRV +S+NY + L + + PFVPG D +G V V F+ GD V
Sbjct: 33 VLVRVHYSSVNYKDGLASIPDGKIVKTXPFVPGIDLAGVV--VSSQHPRFREGDEVIATG 90
Query: 98 -------FAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL-----S 145
F +A+ P+PKG L A A+ A T+ ++ +HR +
Sbjct: 91 YEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALS-IHRLEEHGLTPE 149
Query: 146 SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV---DLSNES 202
G + K G T+ A A + +L+ LG V+ D+ E
Sbjct: 150 RGPVLVTGATGGVGSLAVSXLAK-RGYTVEASTGKAAEHDYLRVLGAKEVLAREDVXAER 208
Query: 203 VIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-EIP 255
+ P K+ A DPVGG+ L +G + V G G E+P
Sbjct: 209 IRPLDKQRWAA--------AVDPVGGRTLATVLSRXRYGGAVAVSGLTGGAEVP 254
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 137/345 (39%), Gaps = 51/345 (14%)
Query: 22 PIVLSKTEPIPQLNSSTA------VRVRVKATSLNYA-NYLQILGKYQEKPPLPFVPGSD 74
PI+ E I ++++++ +R AT+LN + L + K +E P G D
Sbjct: 45 PIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEE---FPLTLGRD 101
Query: 75 YSGTVDAVGPNVSNFKVGDTVCGFAAL-----GSFAQFIVADQFPV---PKGCDLLAAAA 126
SG V G +V FK GD V +AA+ G+ ++F+V V PK AA+
Sbjct: 102 VSGVVMECGLDVKYFKPGDEV--WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAAS 159
Query: 127 LPVAFGTSHVALVHRAQLS----SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAE 182
LP T+ A+ L+ +G+ Q+ K A + AV +
Sbjct: 160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QD 218
Query: 183 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL-NWG 241
+ ++ LG D V+D + SV+E LK+ LK D + D VGG + L W
Sbjct: 219 ASELVRKLGADDVIDYKS----GSVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWS 272
Query: 242 AQILV------------IGFASG--EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED 287
V +G A G + V + AL W W + P + D
Sbjct: 273 GATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCL--D 330
Query: 288 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
+ EL+ G I I T+ S+ AF +E GK +I
Sbjct: 331 DIAELV---DAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVI 372
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 110/306 (35%), Gaps = 68/306 (22%)
Query: 67 LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
LP G + +G ++ VG V + GD V C + +G
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQFP-VPKGCDLLAAAALPVAF-GTSHVALVHRAQLSSGQXXXXXXXXX 157
++A++++ + + K L A A P+ G + V +A L +
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGG 181
Query: 158 XXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
QI K V GATII V E ++ K G D+V++ S + + ++ ++
Sbjct: 182 GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES--- 238
Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
KGVD + D LN + L V P +A + + GL+
Sbjct: 239 KGVDAVID-------------LNNSEKTL---------SVYPKALAKQGKYVMVGLFGAD 276
Query: 277 YKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED 323
H P + + ++ A G + I+ T EAN A +E+
Sbjct: 277 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLEN 336
Query: 324 RKVIGK 329
K IG+
Sbjct: 337 FKAIGR 342
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 75/320 (23%)
Query: 21 SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80
SP+ + + E P + VR++V AT + + + K +K P V G + +G V+
Sbjct: 19 SPLCIEEIEVSPP--KACEVRIQVIATCVCHTDINATDPK--KKALFPVVLGHECAGIVE 74
Query: 81 AVGPNVSNFKVGDTV---------------------CG---------------------- 97
+VGP V+NFK GD V CG
Sbjct: 75 SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF 134
Query: 98 ---------FAALGSFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
F + SF+Q+ V A+ V +L + F + + A ++ A+++
Sbjct: 135 TCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVT 194
Query: 146 SGQXXXXXXXXXXXXXXXXQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVI 204
G K+ GA+ IIA+ EK K+LG L+ +
Sbjct: 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFPKAKALGATDC--LNPRELD 251
Query: 205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLK------LLNWGAQILVIGFASGEIPVIP 258
V++ + GVD D G T ++LK +L WG+ V+G E+ +
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAG---TAQTLKAAVDCTVLGWGS-CTVVGAKVDEMTIPT 307
Query: 259 ANIALVKNWTVHGLYWGSYK 278
++ L + +++G ++G +K
Sbjct: 308 VDVILGR--SINGTFFGGWK 325
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 130/350 (37%), Gaps = 76/350 (21%)
Query: 30 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-------KPPLPFVPGSDYSGTVDAV 82
PIP+ S V ++++A + +++ G++ LP G + +G ++ V
Sbjct: 19 PIPKPKGSQ-VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEV 77
Query: 83 GPNVSNFKVGDTV----------CGFAALG-----------------SFAQFIVADQFP- 114
G V + GD V C + +G ++A++++ +
Sbjct: 78 GDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVLVPHYKY 137
Query: 115 VPKGCDLLAAAALPVAF-GTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK-VCGA 172
+ K L A A P+ G + V +A L + QI K V GA
Sbjct: 138 LYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGA 197
Query: 173 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 232
TII V E ++ K G D+V++ S++ + ++ + KG D + D
Sbjct: 198 TIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQG---KGADAVID-------- 246
Query: 233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR-- 290
LN + L I P +A + + GL+ K H P + + ++
Sbjct: 247 -----LNNSEKTLSI---------YPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFI 292
Query: 291 -----------ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
++ A G + ++ T EAN A +E+ K +G+
Sbjct: 293 GSLVGNQSDFLGIMSLAEAGKVKPMVTKTMKLEEANEAIDNLENFKAVGR 342
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 135/385 (35%), Gaps = 81/385 (21%)
Query: 11 DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYAN-------------YLQI 57
DP SIH ++ P+ P+L A+ V V A+S+NY + +L+
Sbjct: 71 DPRKSIHLDEVPV--------PELGPGEAL-VAVMASSVNYNSVWTSIFEPVSTFAFLER 121
Query: 58 LGKYQ---EKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTV------------------ 95
GK ++ LP+ + GSD +G V GP V+ ++ GD V
Sbjct: 122 YGKLSPLTKRHDLPYHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDT 181
Query: 96 ------------CGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHR-- 141
F L A P PK AAA + T++ LV R
Sbjct: 182 MLDPEQRIWGFETNFGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNG 241
Query: 142 AQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE 201
A + G Q GA I V +K + +S+G + ++D + E
Sbjct: 242 AAMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAE 301
Query: 202 SV-------IPSVKEF----LKARKLKG---VDVLYDPVGGKLTKESLKLLNWGAQILVI 247
KE+ + R+L G +D++++ G + S+ + G I
Sbjct: 302 GYKFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTC 361
Query: 248 GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH 307
SG + + + G ++ +Y+ E AKG I +S
Sbjct: 362 ASTSGYMHEYDNRYLWMSLKRIIGSHFANYR---------EAYEANRLIAKGKIHPTLSK 412
Query: 308 TYSPSEANLAFSAIEDRKVIGKVMI 332
TYS E A + GKV +
Sbjct: 413 TYSLEETGQAAYDVHRNLHQGKVGV 437
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 113/310 (36%), Gaps = 70/310 (22%)
Query: 67 LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
LP G + +G ++ VG V + GD V C + +G
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQFPVP---KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 156
++A++++ + + + + AA L + T++ A V +A L +
Sbjct: 122 FDGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRA-VRKASLDPTKTLLVVGAG 180
Query: 157 XXXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 215
QI K V GATII V E ++ K G D+V++ S + + ++ ++
Sbjct: 181 GGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-- 238
Query: 216 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG 275
KGVD + D LN + L V P +A + GL+
Sbjct: 239 -KGVDAVID-------------LNNSEKTL---------SVYPKALAKQGKYVXVGLFGA 275
Query: 276 SYKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE 322
H P + + + A G + I+ T EAN A +E
Sbjct: 276 DLHYHAPLITLSEIQFVGSLVGNQSDFLGIXRLAEAGKVKPXITKTXKLEEANEAIDNLE 335
Query: 323 DRKVIGKVMI 332
+ K IG+ ++
Sbjct: 336 NFKAIGRQVL 345
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 133 TSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGV 192
T++ L+ + G+ QI K+ G ++ EK+ +L+ LG
Sbjct: 148 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGF 207
Query: 193 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 248
D V N + S++E LK G D +D VGG+ + + + +I + G
Sbjct: 208 DVVF---NYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 260
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 104/270 (38%), Gaps = 34/270 (12%)
Query: 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
+AL K D VS+H + TE +P+ V ++V + +NY + L
Sbjct: 5 FQALQAEKNAD-DVSVH-----VKTISTEDLPK----DGVLIKVAYSGINYKDGLAGKAG 54
Query: 61 YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV------CGFAALGSFAQF--IVADQ 112
P + G D +GTV V N F GD V G + G +++ + D
Sbjct: 55 GNIVREYPLILGIDAAGTV--VSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW 112
Query: 113 F-PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----GQXXXXXXXXXXXXXXXXQI 166
P+P+ L A A T+ ++ VHR + + G +
Sbjct: 113 LVPLPQNLSLKEAXVYGTAGFTAALS-VHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXL 171
Query: 167 GKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 226
K G ++A E +LK LG V+ S E V + L ++ +G DPV
Sbjct: 172 NK-RGYDVVASTGNREAADYLKQLGASEVI--SREDVYDGTLKALSKQQWQGA---VDPV 225
Query: 227 GGKLTKESLKLLNWGAQILVIGF-ASGEIP 255
GGK L + +G + V G GE+P
Sbjct: 226 GGKQLASLLSKIQYGGSVAVSGLTGGGEVP 255
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 133 TSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGV 192
T++ L+ + G+ QI K+ G ++ EK+ +L+ LG
Sbjct: 127 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGF 186
Query: 193 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 248
D V N + S++E LK G D +D VGG+ + + + +I + G
Sbjct: 187 DVVF---NYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 239
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 75/320 (23%)
Query: 21 SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80
SP+ + + E P + VR++V AT + + K +K P V G + +G V+
Sbjct: 19 SPLCIEEIEVSPP--KACEVRIQVIATCVCPTDINATDPK--KKALFPVVLGHECAGIVE 74
Query: 81 AVGPNVSNFKVGDTV---------------------CG---------------------- 97
+VGP V+NFK GD V CG
Sbjct: 75 SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF 134
Query: 98 ---------FAALGSFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
F + SF+Q+ V A+ V +L + F + + A ++ A+++
Sbjct: 135 TCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVT 194
Query: 146 SGQXXXXXXXXXXXXXXXXQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVI 204
G K+ GA+ IIA+ EK K+LG L+ +
Sbjct: 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFPKAKALGATDC--LNPRELD 251
Query: 205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLK------LLNWGAQILVIGFASGEIPVIP 258
V++ + GVD D G T ++LK +L WG+ V+G E+ +
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAG---TAQTLKAAVDCTVLGWGS-CTVVGAKVDEMTIPT 307
Query: 259 ANIALVKNWTVHGLYWGSYK 278
++ L + +++G ++G +K
Sbjct: 308 VDVILGR--SINGTFFGGWK 325
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 165 QIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 223
Q+ K+ G ++ A EK+ LK+ G D + ES + + LK G+D+ +
Sbjct: 174 QLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAA---LKRCFPNGIDIYF 230
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFAS 251
+ VGGK+ L +N +I V G S
Sbjct: 231 ENVGGKMLDAVLVNMNMHGRIAVCGMIS 258
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKP-PLPFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
V V+V AT + + + ++ + Q+ P PLP V G + SG ++A+GPNV+ +VGD V
Sbjct: 34 VLVKVVATGMCHTD---LIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHV 87
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 168 KVCGATII-AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 226
KVCGA+II AV +++ K LG HV++ + + ++KE GV+ +
Sbjct: 211 KVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG----GVNFALEST 266
Query: 227 GG-KLTKESLKLLNWGAQILVIGFAS-GEIPVIPANIALVKNWTVHGLYWGS 276
G ++ K+ + L +I V+G G N L+ T+ G+ GS
Sbjct: 267 GSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS 318
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 121 LLAAAALPVAFGTSHVALVHRAQLSSG--QXXXXXXXXXXXXXXXXQIGKVCGAT-IIAV 177
L A +P TS + + + +S+G Q QIG + G + ++ +
Sbjct: 131 FLGAIGMPGL--TSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGI 188
Query: 178 ARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
EK FL S LG D V+ +V ++E GVDV +D VGG ++ +
Sbjct: 189 CGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPG----GVDVYFDNVGGDISNAVIS 244
Query: 237 LLNWGAQILVIG 248
+N + I++ G
Sbjct: 245 QMNENSHIILCG 256
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 114/317 (35%), Gaps = 65/317 (20%)
Query: 18 DEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQEKPPLPFVPGSDY 75
+ P+V+ + E +P N +R+++ AT + + + + GK+++ P V G +
Sbjct: 16 EANKPLVIEEIEVDVPHANE---IRIKIIATGVCHTDLYHLFEGKHKDG--FPVVLGHEG 70
Query: 76 SGTVDAVGPNVSNFKVGDTV-------CG------------------------------- 97
+G V++VGP V+ F+ G+ V CG
Sbjct: 71 AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETR 130
Query: 98 ----------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQL 144
F +F+Q+ V +Q V K L L T A V+ A++
Sbjct: 131 FTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKV 190
Query: 145 SSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 204
G IIAV +K + K G V+ ++ S
Sbjct: 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHS-- 248
Query: 205 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLK--LLNWGAQILVIGFASGEIPVIPANI 261
+ + L GVD + VG + + +L+ L WG +LV ++ P I
Sbjct: 249 EPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRP--I 306
Query: 262 ALVKNWTVHGLYWGSYK 278
L+ T G +G +K
Sbjct: 307 QLIAGRTWKGSMFGGFK 323
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 165 QIGKVCGAT-IIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL 222
QIG G + ++ + EK L S LG D ++ ++V ++E A GVDV
Sbjct: 179 QIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA----GVDVY 234
Query: 223 YDPVGGKLTKESLKLLNWGAQILVIGFASGEI-------PVIPANIALVK--NWTVHGLY 273
+D VGG ++ + +N + I++ G S P+ PA A+ K N T
Sbjct: 235 FDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFL 294
Query: 274 WGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 333
+YK E + +L W +G + I + AF ++ IGK ++
Sbjct: 295 VLNYK----DKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVC 350
Query: 334 FDDMKSI 340
+ S+
Sbjct: 351 ISEEISL 357
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 165 QIGKVCGAT-IIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL 222
QIG G + ++ + EK L S LG D ++ ++V ++E A GVDV
Sbjct: 174 QIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA----GVDVY 229
Query: 223 YDPVGGKLTKESLKLLNWGAQILVIGFASGEI-------PVIPANIALVK--NWTVHGLY 273
+D VGG ++ + +N + I++ G S P+ PA A+ K N T
Sbjct: 230 FDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFL 289
Query: 274 WGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 333
+YK E + +L W +G + I + AF ++ IGK ++
Sbjct: 290 VLNYK----DKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVC 345
Query: 334 FDD 336
+
Sbjct: 346 ISE 348
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 35/232 (15%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA-------VGPNV--SNFK 90
V V V +SLNY + L I GK + P +PG D++GTV G V + +
Sbjct: 51 VTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWG 110
Query: 91 VGDTVCGFAALGSFAQ--FIVADQFPVPKGCDLLAAAALPVAFGTSHVALVH------RA 142
VG+ G A + + ++VA +P+G D A + A T+ + ++ R
Sbjct: 111 VGENHWGGLAEQARVKGDWLVA----MPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRP 166
Query: 143 QLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES 202
Q G+ + K+ G ++AV+ ++LKSLG
Sbjct: 167 Q--DGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSLGASR-------- 215
Query: 203 VIPSVKEFLKARKLKGV--DVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 252
V+P EF ++R L+ D VG K+ + L +N+G + G A G
Sbjct: 216 VLPR-DEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG 266
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 84/240 (35%), Gaps = 58/240 (24%)
Query: 11 DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYAN-------------YLQI 57
DP SIH + P+ P+L A+ V V A+S+NY + +L+
Sbjct: 53 DPRKSIHLDDVPV--------PELGPGEAL-VAVMASSVNYNSVHTSIFEPLSTFGFLER 103
Query: 58 LGKYQE---KPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTV------------------ 95
G+ + + LP+ V GSD +G V GP V+ ++ GD V
Sbjct: 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDT 163
Query: 96 ------------CGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHR-- 141
F L A P P AAA + T++ LV R
Sbjct: 164 MLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNG 223
Query: 142 AQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE 201
A + G Q GA I V +K + +++G + ++D + E
Sbjct: 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAE 283
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 133 TSHVALVHRAQLSSG--QXXXXXXXXXXXXXXXXQIGKVCGAT-IIAVARGAEKIKFLKS 189
TS + + + +S+G Q QIG + G + ++ + EK FL S
Sbjct: 151 TSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTS 210
Query: 190 -LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 248
LG D V+ +V ++E GVDV +D VGG ++ + N + I++ G
Sbjct: 211 ELGFDAAVNYKTGNVAEQLREACPG----GVDVYFDNVGGDISNTVISQXNENSHIILCG 266
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 136/356 (38%), Gaps = 66/356 (18%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYAN-YLQILGKYQEKPPLPFVPGSDYSGT 78
P+V+ P P + ++V A L +++ ++ + Q LP G + GT
Sbjct: 11 SEPVVVDIPTPTPGPGE---ILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGT 67
Query: 79 VDAVGPNVSNFKVGDTVC--------------------------------GFAALGSFAQ 106
V +G V+ F VGD V G + GS A+
Sbjct: 68 VAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAE 127
Query: 107 FIVAD--QFPVPKG-CDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXX 163
+++ D + VP G D +AAA L A T + A+ L
Sbjct: 128 YMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVG 187
Query: 164 XQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL 222
QI + V A +IAV +++ + +G D V S +++E +G +
Sbjct: 188 IQILRAVSAARVIAVDLDDDRLALAREVGADAAVK-SGAGAADAIRELTGG---QGATAV 243
Query: 223 YDPVGGKLTKESL-KLLNWGAQILVIGFASGE-----IPVIPANIALVKNWTVHGLYWGS 276
+D VG + T ++ +++ I V+G +G +IP ++V YWG+
Sbjct: 244 FDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTP------YWGT 297
Query: 277 YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
L E++ A G + IH + T++ E A+ + + + G+ ++
Sbjct: 298 ---------RSELMEVVALARAGRLDIH-TETFTLDEGPAAYRRLREGSIRGRGVV 343
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
+ V++++ S+N + Q L + P V G D G V++VG V+ F GD V
Sbjct: 35 ILVKIQSISVNPVDTKQRL---MDVSKAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSG 91
Query: 100 A---LGSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALV------HRAQLSSG 147
+ GS A++ + ++ V PK A +LP+ T++ L + G
Sbjct: 92 SPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEG 151
Query: 148 QXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 207
+ QI K G +I A E I++ K +G D V++ ES++
Sbjct: 152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLN-HKESLLNQF 210
Query: 208 K 208
K
Sbjct: 211 K 211
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 15 SIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD 74
S+ ++ IV IP++ VRV++ ++ L ++ +I P+ G +
Sbjct: 3 SVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITL--GHE 60
Query: 75 YSGTVDAVGPNVSNFKVGDTVCGFAALGSF 104
+SG +DAVG V + GD V L F
Sbjct: 61 FSGYIDAVGSGVDDLHPGDAVACVPLLPCF 90
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 126/366 (34%), Gaps = 73/366 (19%)
Query: 30 PIPQLNSSTAVRVRVKATSLNYANYLQIL----------------GKYQEKPPLPF-VPG 72
P+P+L + V V V A+S+NY + G + + P+ V G
Sbjct: 56 PMPEL-APDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLG 114
Query: 73 SDYSGTVDAVGPNVSNFKVGDTV------------------------------CGFAALG 102
SD SG V G V +K GD V F L
Sbjct: 115 SDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLA 174
Query: 103 SFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLSSGQXXXXXXXXXXXX 160
+ + P P AA P+ GT++ LV AQ+ G
Sbjct: 175 EYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLG 234
Query: 161 XXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK-----ARK 215
Q K G +AV A+K +++LG D V++ + + + + + RK
Sbjct: 235 SYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRK 294
Query: 216 LKGV---------DVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKN 266
L + D++++ G S+ + G ++ G +SG + +K
Sbjct: 295 LAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKL 354
Query: 267 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKV 326
+ G + + H + L E G + +S Y +EA A ++ +
Sbjct: 355 KKIVGSHGAN---HEEQQATNRLFE------SGAVVPAMSAVYPLAEAAEACRVVQTSRQ 405
Query: 327 IGKVMI 332
+GKV +
Sbjct: 406 VGKVAV 411
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 165 QIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 223
Q K+ G ++ A EK+ LKS G D + E + + LK G+D+ +
Sbjct: 172 QFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAA---LKRYFPDGIDIYF 228
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFAS 251
+ VGGK+ L + +I V G S
Sbjct: 229 ENVGGKMLDAVLVNMKLYGRIAVCGMIS 256
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81
V V V +SLNY + L I GK + P +PG D++GTV A
Sbjct: 30 VTVDVHWSSLNYKDALAITGKGKIIRHFPXIPGIDFAGTVHA 71
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 85/222 (38%), Gaps = 3/222 (1%)
Query: 113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGA 172
+ VP L AA++P+ + T++ +LV R ++ G+ I G
Sbjct: 1634 WEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC 1693
Query: 173 TIIAVARGAEKIKFLKSL--GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL 230
+ AEK +L++ +D +N + L+ KGVD++ + + +
Sbjct: 1694 RVFTTVGSAEKRAYLQARFPQLDETC-FANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEK 1752
Query: 231 TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR 290
+ S++ L + L IG +KN T HG+ S ++
Sbjct: 1753 LQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSE 1812
Query: 291 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
L +G++ + ++ AF + K IGKV+I
Sbjct: 1813 LLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVI 1854
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDQVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 29 EPIPQLNSSTAVRVRVKATSLNYANY----LQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
P+P+ + VRV+A S+ + + + +PPL V G ++SG V+AVGP
Sbjct: 18 RPVPEPGPGE-ILVRVEAASICGTDLHIWKWDAWARGRIRPPL--VTGHEFSGVVEAVGP 74
Query: 85 NVSNFKVGDTV 95
V +VGD V
Sbjct: 75 GVRRPQVGDHV 85
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
+EK P + + E P + VR+++ AT + ++ + G PLP + G + +G
Sbjct: 16 EEKKPFSIEEVEVAPP--KAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV-------CGFAALGSFAQ--FIVADQFPVPKG 118
V+++G V+ + GD V CG + + F + + +P+G
Sbjct: 72 IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
VR+++ AT++ + + + G E P + G + +G V++VG V+ K GDTV
Sbjct: 35 VRIKIIATAVCHTDAYTLSGADPEGC-FPVILGHEGAGIVESVGEGVTKLKAGDTV 89
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
VR+++ AT++ + + + G E P + G + +G V++VG V+ K GDTV
Sbjct: 35 VRIKIIATAVCHTDAYTLSGADPEGC-FPVILGHEGAGIVESVGEGVTKLKAGDTV 89
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase And 12-Hydroxydodecanoic
Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase And 12-Hydroxydodecanoic
Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic
Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic
Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
VR+++ AT++ + + + G E P + G + +G V++VG V+ K GDTV
Sbjct: 34 VRIKIIATAVCHTDAYTLSGADPEGC-FPVILGHEGAGIVESVGEGVTKLKAGDTV 88
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 132/351 (37%), Gaps = 63/351 (17%)
Query: 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVG 83
++ + P P S+ VRV+VK + ++ I + P V G ++ G +DAVG
Sbjct: 34 IIEREIPTP---SAGEVRVKVKLAGICGSDS-HIYRGHNPFAKYPRVIGHEFFGVIDAVG 89
Query: 84 PNVSNFKVGDTV-------CG---------------FAALGSFAQFIVADQFPVPKGCDL 121
V + +VG+ V CG A LG A ++ VP
Sbjct: 90 EGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAK--- 146
Query: 122 LAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGA 181
A +P A + ++ +++ G + G TI+ V +G
Sbjct: 147 -NAWKIPEAVADQYAVMIEPFTIAA-NVTGHGQPTENDTVLVYGAGPI-GLTIVQVLKGV 203
Query: 182 -------------EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
E+++ K G D + N S P + E + +K ++
Sbjct: 204 YNVKNVIVADRIDERLEKAKESGADWAI---NNSQTP-LGESFAEKGIKPTLIIDAACHP 259
Query: 229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
+ KE++ L + A+I+++GF+S VI G+ I + +
Sbjct: 260 SILKEAVTLASPAARIVLMGFSSEPSEVIQ-----------QGITGKELSIFSSRLNANK 308
Query: 289 LRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIE-DRKVIGKVMIAFDD 336
++ W +KGLI I+HT+ A S E D+K KV++ F +
Sbjct: 309 FPVVIDWLSKGLIKPEKLITHTFDFQHVADAISLFELDQKHCCKVLLTFSE 359
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 127/370 (34%), Gaps = 73/370 (19%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
K P + E P + VR+++ A + + + + G PLP + G + +G V
Sbjct: 18 KKPFSIEDVEVAPP--KAYEVRIKMVAVGICHTDDHVVSGNLVT--PLPVILGHEAAGIV 73
Query: 80 DAVGPNVSNFKVGDTV-------CG----------------------------------- 97
++VG V+ K GD V CG
Sbjct: 74 ESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCR 133
Query: 98 ------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 148
F +F+Q+ V D+ V K L + F T + + V+ A+++ G
Sbjct: 134 GKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGS 193
Query: 149 XXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
A IIAV +K K LG ++ + ++
Sbjct: 194 TCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYK--KPIQ 251
Query: 209 EFLKARKLKGVDVLYDPVGGKLTKESLKLLN----WGAQILV-IGFASGEIPVIPANIAL 263
E LK GVD ++ + G+L LL G ++V + AS + + P +
Sbjct: 252 EVLKEMTDGGVDFSFEVI-GRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLT 310
Query: 264 VKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI 321
+ W G +G +K P ++ D A K + I+H + N F +
Sbjct: 311 GRTW--KGAVYGGFKSKEGIPKLVAD------FMAKKFSLDALITHVLPFEKINEGFDLL 362
Query: 322 EDRKVIGKVM 331
K I V+
Sbjct: 363 HSGKSIRTVL 372
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 166 IGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 224
I + GA +I +A ++K + +G D ++ SV K + +G D + +
Sbjct: 214 IARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE 273
Query: 225 PVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANI---ALVKNWTVHGLYWGSYKIH 280
G + E +LL G V G A + PV P + ++KN T G+ W S H
Sbjct: 274 ATGDSRALLEGSELLRRGGFYSVAGVAVPQDPV-PFKVYEWLVLKNATFKGI-WVSDTSH 331
Query: 281 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 327
+ + R L++ I+H EAN A +E R+ +
Sbjct: 332 FVKTVSITSRNYQ------LLSKLITHRLPLKEANKALELMESREAL 372
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 123/370 (33%), Gaps = 73/370 (19%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
K P + E P A VR+K ++ + PLP + G + +G V
Sbjct: 18 KKPFSIEDVEVAP----PKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVILGHEAAGIV 73
Query: 80 DAVGPNVSNFKVGDTV-------CG----------------------------------- 97
++VG V+ K GD V CG
Sbjct: 74 ESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCR 133
Query: 98 ------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 148
F +F+Q+ V D+ V K L + F T + + V+ A+++ G
Sbjct: 134 GKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGS 193
Query: 149 XXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
A IIAV +K K LG ++ + ++
Sbjct: 194 TCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYK--KPIQ 251
Query: 209 EFLKARKLKGVDVLYDPVGGKLTKESLKLLN----WGAQILV-IGFASGEIPVIPANIAL 263
E LK GVD ++ + G+L LL G ++V + AS + + P +
Sbjct: 252 EVLKEMTDGGVDFSFEVI-GRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLT 310
Query: 264 VKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI 321
+ W G +G +K P ++ D A K + I+H + N F +
Sbjct: 311 GRTW--KGAVYGGFKSKEGIPKLVAD------FMAKKFSLDALITHVLPFEKINEGFDLL 362
Query: 322 EDRKVIGKVM 331
K I V+
Sbjct: 363 HSGKSICTVL 372
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 110/324 (33%), Gaps = 69/324 (21%)
Query: 66 PLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG--------------------- 97
PLP + G + +G V++VG V+ K GD V CG
Sbjct: 60 PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 98 --------------------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTS 134
F +F+Q+ V D+ V K L + F T
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
+ + V+ A+++ G A IIAV +K K LG
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLN----WGAQILV-IGF 249
++ + ++E LK GVD ++ + G+L LL G ++V +
Sbjct: 240 CINPQDYK--KPIQEVLKEMTDGGVDFSFEVI-GRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 250 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISH 307
AS + + P + + W G +G +K P ++ D A K + I+H
Sbjct: 297 ASQNLSINPMLLLTGRTW--KGAVYGGFKSKEGIPKLVAD------FMAKKFSLDALITH 348
Query: 308 TYSPSEANLAFSAIEDRKVIGKVM 331
+ N F + K I V+
Sbjct: 349 VLPFEKINEGFDLLHSGKSIRTVL 372
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 123/370 (33%), Gaps = 73/370 (19%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
K P + E P A VR+K ++ + PLP + G + +G V
Sbjct: 18 KKPFSIEDVEVAP----PKAYEVRIKMVAVGICGTDDHVVSGNLVTPLPVILGHEAAGIV 73
Query: 80 DAVGPNVSNFKVGDTV-------CG----------------------------------- 97
++VG V+ K GD V CG
Sbjct: 74 ESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCR 133
Query: 98 ------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 148
F +F+Q+ V D+ V K L + F T + + V+ A+++ G
Sbjct: 134 GKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGS 193
Query: 149 XXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
A IIAV +K K LG ++ + ++
Sbjct: 194 TCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYK--KPIQ 251
Query: 209 EFLKARKLKGVDVLYDPVGGKLTKESLKLLN----WGAQILV-IGFASGEIPVIPANIAL 263
E LK GVD ++ + G+L LL G ++V + AS + + P +
Sbjct: 252 EVLKEMTDGGVDFSFEVI-GRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLT 310
Query: 264 VKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI 321
+ W G +G +K P ++ D A K + I+H + N F +
Sbjct: 311 GRTW--KGAVYGGFKSKEGIPKLVAD------FMAKKFSLDALITHVLPFEKINEGFDLL 362
Query: 322 EDRKVIGKVM 331
K I V+
Sbjct: 363 HSGKSIRTVL 372
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
VR+++ AT++ + + + G E P + G +G V++VG V+ K GDTV
Sbjct: 34 VRIKIIATAVCHTDAYTLSGADPEGC-FPVILGHLGAGIVESVGEGVTKLKAGDTV 88
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 69/371 (18%), Positives = 133/371 (35%), Gaps = 83/371 (22%)
Query: 17 HDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYS 76
++ P+V+ + P + VR+++ T+L + + GK E P + G + +
Sbjct: 15 YEPNKPLVIEDVQVAPP--QAGEVRIKILYTALCHTDAYTWSGKDPEGL-FPCILGHEAA 71
Query: 77 GTVDAVGPNVSNFKVGDTV---------------------CG------------------ 97
G V++VG V+ + GD V CG
Sbjct: 72 GIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSR 131
Query: 98 ----------FAALGSFAQFIVADQF---------PVPKGCDLLAAAALPVAFGTSHVAL 138
F +F+Q+ V P+ K C L +P G A+
Sbjct: 132 FSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVC--LLGCGVPTGLG----AV 185
Query: 139 VHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL 198
+ A++ G + II + ++K + K GV+ V+
Sbjct: 186 WNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNP 245
Query: 199 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLN--WGAQILVIGFASG-EI 254
+ ++E + GVD ++ +G + + +L+ + WG ++V ASG EI
Sbjct: 246 KDHD--KPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 303
Query: 255 PVIPANIALVKNWTVHGLYWGSYK--IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS 312
P + + W G +G +K P ++E + + + + +I+H +
Sbjct: 304 STRPFQLVTGRVW--KGTAFGGFKSRTQVPWLVEKYMNKEI------KVDEYITHNLTLG 355
Query: 313 EANLAFSAIED 323
E N AF + +
Sbjct: 356 EINKAFDLLHE 366
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 88/259 (33%), Gaps = 57/259 (22%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
K P + + E P + VR+++ A + ++ + G PLP + G + +G V
Sbjct: 18 KKPFSIEEVEVAPP--KAHEVRIKMVAAGICRSDEHVVSGNLVT--PLPVILGHEAAGIV 73
Query: 80 DAVGPNVSNFKVGDTV-------CG----------------------------------- 97
++VG V+ K GD V CG
Sbjct: 74 ESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCS 133
Query: 98 ------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 148
F + +F+Q+ V D+ V K L + F T + + V A+++ G
Sbjct: 134 GKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGS 193
Query: 149 XXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
A IIAV +K K LG ++ + ++
Sbjct: 194 TCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYK--KPIQ 251
Query: 209 EFLKARKLKGVDVLYDPVG 227
E LK GVD ++ +G
Sbjct: 252 EVLKEMTDGGVDFSFEVIG 270
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 68 PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
P +PG + +G + VG V FK+GD V
Sbjct: 59 PMIPGHEIAGIIKEVGKGVKKFKIGDVV 86
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 85/259 (32%), Gaps = 57/259 (22%)
Query: 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
K P + + E P A VR+K ++ + PLP + G + +G V
Sbjct: 18 KKPFSIEEVEVAP----PKAHEVRIKMVAVGICGTDDHVVSGTMVTPLPVILGHEAAGIV 73
Query: 80 DAVGPNVSNFKVGDTV-------CG----------------------------------- 97
++VG V+ K GD V CG
Sbjct: 74 ESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCR 133
Query: 98 ------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 148
F + +F+Q+ V D+ V K L + F T + + V+ A+++ G
Sbjct: 134 RKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGS 193
Query: 149 XXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
A IIAV +K K LG ++ + ++
Sbjct: 194 TCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYK--KPIQ 251
Query: 209 EFLKARKLKGVDVLYDPVG 227
E LK GVD ++ +G
Sbjct: 252 EVLKEMTDGGVDFSFEVIG 270
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
++K P + + E P + VR+++ A + ++ + G PLP + G + +G
Sbjct: 16 EQKKPFSIEEVEVAPP--KAHEVRIKMVAAGICRSDDHVVSGTLVA--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV 95
V+++G V+ + GD V
Sbjct: 72 IVESIGEGVTTVRPGDKV 89
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
++K P + + E P + VR+++ A + ++ + G PLP + G + +G
Sbjct: 16 EQKKPFSIEEVEVAPP--KAHEVRIKMVAAGICRSDDHVVSGTLVA--PLPVIAGHEAAG 71
Query: 78 TVDAVGPNVSNFKVGDTV 95
V+++G V+ + GD V
Sbjct: 72 IVESIGEGVTTVRPGDKV 89
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 173 TIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 231
TI+ ++R + F LG D+V ++ + ES+I + + L G + D VG + T
Sbjct: 198 TIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGL------GASIAIDLVGTEET 251
Query: 232 KESL-KLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR 290
+L KLL I+++G + + + A V N + G +GS + LED +R
Sbjct: 252 TYNLGKLLAQEGAIILVGMEGKRVSLEAFDTA-VWNKKLLGSNYGSL-----NDLEDVVR 305
Query: 291 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 333
+ G I +I + N AF+ +++ +V G+ +I
Sbjct: 306 ----LSESGKIKPYIIKV-PLDDINKAFTNLDEGRVDGRQVIT 343
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 30 PIPQLNSSTAV----RVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPN 85
PIP+ + + V + + ++Y Y +I G + K P+ V G + SGTV+ VG +
Sbjct: 25 PIPEPGPNEVLLRMHSVGICGSDVHYWEYGRI-GNFIVKKPM--VLGHEASGTVEKVGSS 81
Query: 86 VSNFKVGDTV 95
V + K GD V
Sbjct: 82 VKHLKPGDRV 91
>pdb|4AF0|A Chain A, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 170 CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK--ARKLKGVDVLYDPVG 227
CGA I +++K L G+D VV S++ EF+K + +DV+ G
Sbjct: 272 CGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVI---AG 328
Query: 228 GKLTKE-SLKLLNWGAQILVIGFASGEIPVIPANIAL 263
+T+E + +L+ GA L IG SG I + +A+
Sbjct: 329 NVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAV 365
>pdb|4AF0|B Chain B, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 170 CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK--ARKLKGVDVLYDPVG 227
CGA I +++K L G+D VV S++ EF+K + +DV+ G
Sbjct: 272 CGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVI---AG 328
Query: 228 GKLTKE-SLKLLNWGAQILVIGFASGEIPVIPANIAL 263
+T+E + +L+ GA L IG SG I + +A+
Sbjct: 329 NVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAV 365
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From
Silverleaf Whitefly
Length = 352
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 68 PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
P V G + SGTV VG NV + K GD V
Sbjct: 61 PMVIGHEASGTVVKVGKNVKHLKKGDRV 88
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 21 SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80
P+ +++ EP P V++ + + +++ Q+ ++ P VPG + G V
Sbjct: 36 EPMDITRREPGPN-----DVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIVGRVV 89
Query: 81 AVGPNVSNFKVGDTV 95
AVG V + GD V
Sbjct: 90 AVGDQVEKYAPGDLV 104
>pdb|1XFD|A Chain A, Structure Of A Human A-Type Potassium Channel Accelerating
Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase
Family
pdb|1XFD|B Chain B, Structure Of A Human A-Type Potassium Channel Accelerating
Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase
Family
pdb|1XFD|C Chain C, Structure Of A Human A-Type Potassium Channel Accelerating
Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase
Family
pdb|1XFD|D Chain D, Structure Of A Human A-Type Potassium Channel Accelerating
Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase
Family
Length = 723
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 300 LITIHISHTYSPSEANLAFSAIEDRKV 326
++ HI+H +SP LA++AI D +V
Sbjct: 171 ILKTHIAHWWSPDGTRLAYAAINDSRV 197
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 30 PIPQLNSSTAV----RVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPN 85
PIP+ + + V + + ++Y Y +I G + K P V G + SGTV+ VG +
Sbjct: 25 PIPEPGPNEVLLRXHSVGICGSDVHYWEYGRI-GNFIVKKPX--VLGHEASGTVEKVGSS 81
Query: 86 VSNFKVGDTV 95
V + K GD V
Sbjct: 82 VKHLKPGDRV 91
>pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12
Length = 301
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 19 EKSPI-VLSKTEPIPQ----LNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS 73
++SPI V+ K +P Q L S T R V + SL+ + + ++G Y + L V
Sbjct: 26 QQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLH--DRIYVIGGYDGRSRLSSVECL 83
Query: 74 DYSGTVDAVGPNVSNFKVGDTVCGFAALGSF 104
DY+ D V +V+ V + G LG
Sbjct: 84 DYTADEDGVWYSVAPMNVRRGLAGATTLGDM 114
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,626,493
Number of Sequences: 62578
Number of extensions: 384990
Number of successful extensions: 1085
Number of sequences better than 100.0: 116
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 920
Number of HSP's gapped (non-prelim): 128
length of query: 344
length of database: 14,973,337
effective HSP length: 100
effective length of query: 244
effective length of database: 8,715,537
effective search space: 2126591028
effective search space used: 2126591028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)