Query 019199
Match_columns 344
No_of_seqs 126 out of 1477
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 07:31:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019199.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019199hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.1E-65 2.4E-70 455.1 30.2 324 7-340 1-338 (339)
2 KOG0023 Alcohol dehydrogenase, 100.0 2.2E-62 4.8E-67 419.9 30.6 342 1-343 1-358 (360)
3 PLN02586 probable cinnamyl alc 100.0 9E-54 1.9E-58 396.3 34.6 337 6-342 9-356 (360)
4 COG1062 AdhC Zn-dependent alco 100.0 3E-54 6.5E-59 374.1 27.5 327 8-338 1-365 (366)
5 KOG0024 Sorbitol dehydrogenase 100.0 1.3E-52 2.8E-57 360.7 28.2 319 11-340 6-353 (354)
6 PLN02178 cinnamyl-alcohol dehy 100.0 1.1E-51 2.3E-56 383.7 34.7 335 7-341 4-350 (375)
7 PLN02514 cinnamyl-alcohol dehy 100.0 1.4E-50 3.1E-55 374.8 35.0 342 1-342 1-353 (357)
8 KOG0022 Alcohol dehydrogenase, 100.0 5.7E-50 1.2E-54 341.9 27.6 330 6-338 4-374 (375)
9 PRK09880 L-idonate 5-dehydroge 100.0 2.2E-48 4.7E-53 358.6 31.8 322 8-339 3-343 (343)
10 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.1E-48 6.8E-53 355.1 31.2 304 20-337 13-328 (329)
11 cd08281 liver_ADH_like1 Zinc-d 100.0 1.3E-47 2.9E-52 357.0 32.6 327 8-337 1-371 (371)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 3.4E-47 7.3E-52 353.7 33.2 326 11-339 3-368 (368)
13 cd08239 THR_DH_like L-threonin 100.0 5.2E-47 1.1E-51 349.1 32.6 318 11-339 2-339 (339)
14 PLN02740 Alcohol dehydrogenase 100.0 5.4E-47 1.2E-51 353.9 33.1 331 6-339 7-381 (381)
15 PLN02827 Alcohol dehydrogenase 100.0 1.5E-46 3.2E-51 350.1 34.2 327 8-340 11-377 (378)
16 COG0604 Qor NADPH:quinone redu 100.0 4.5E-47 9.8E-52 344.3 29.8 298 8-339 1-326 (326)
17 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.1E-46 2.3E-51 349.3 32.1 324 11-338 3-357 (358)
18 cd08300 alcohol_DH_class_III c 100.0 2.1E-46 4.6E-51 348.6 32.8 326 10-338 3-368 (368)
19 cd08301 alcohol_DH_plants Plan 100.0 3.4E-46 7.4E-51 347.4 32.9 327 9-338 2-369 (369)
20 cd08277 liver_alcohol_DH_like 100.0 5E-46 1.1E-50 345.6 33.5 326 8-337 1-364 (365)
21 COG1063 Tdh Threonine dehydrog 100.0 2.9E-45 6.2E-50 336.7 30.9 319 15-338 6-349 (350)
22 KOG1197 Predicted quinone oxid 100.0 1.2E-45 2.7E-50 306.2 25.0 301 6-343 7-334 (336)
23 TIGR03201 dearomat_had 6-hydro 100.0 3.8E-45 8.2E-50 337.8 31.1 313 15-338 4-348 (349)
24 TIGR02819 fdhA_non_GSH formald 100.0 1.4E-44 3.1E-49 337.6 32.6 321 12-340 5-391 (393)
25 cd08230 glucose_DH Glucose deh 100.0 1.2E-44 2.6E-49 335.3 30.4 306 22-339 13-355 (355)
26 cd08296 CAD_like Cinnamyl alco 100.0 1.3E-43 2.8E-48 325.7 33.2 319 11-338 2-333 (333)
27 PRK10309 galactitol-1-phosphat 100.0 1.5E-43 3.3E-48 327.0 31.9 316 12-340 3-347 (347)
28 cd05283 CAD1 Cinnamyl alcohol 100.0 2.4E-43 5.2E-48 324.5 32.9 326 11-338 1-337 (337)
29 cd08231 MDR_TM0436_like Hypoth 100.0 9.6E-43 2.1E-47 323.4 32.9 325 11-338 2-360 (361)
30 cd08237 ribitol-5-phosphate_DH 100.0 2.1E-43 4.5E-48 325.0 25.9 308 9-340 2-340 (341)
31 cd08233 butanediol_DH_like (2R 100.0 5.7E-42 1.2E-46 317.0 31.0 315 12-337 3-350 (351)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 5.7E-41 1.2E-45 310.4 31.5 320 12-339 3-351 (351)
33 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.2E-41 4.7E-46 307.3 27.0 288 10-338 2-308 (308)
34 cd08299 alcohol_DH_class_I_II_ 100.0 1.6E-40 3.4E-45 309.4 32.4 327 9-339 7-373 (373)
35 PRK10083 putative oxidoreducta 100.0 2.4E-40 5.3E-45 304.7 31.9 318 12-341 3-339 (339)
36 cd05284 arabinose_DH_like D-ar 100.0 2.8E-40 6.1E-45 304.4 32.2 319 11-338 2-339 (340)
37 cd08278 benzyl_alcohol_DH Benz 100.0 5.8E-40 1.3E-44 305.0 32.4 326 8-338 1-365 (365)
38 PRK09422 ethanol-active dehydr 100.0 8.9E-40 1.9E-44 300.8 33.3 319 12-340 3-337 (338)
39 cd08238 sorbose_phosphate_red 100.0 2.8E-40 6.2E-45 311.3 30.0 312 8-342 1-371 (410)
40 cd05278 FDH_like Formaldehyde 100.0 6.1E-39 1.3E-43 296.3 32.3 319 12-338 3-346 (347)
41 cd08297 CAD3 Cinnamyl alcohol 100.0 9.3E-39 2E-43 294.4 33.1 322 8-339 1-341 (341)
42 cd08240 6_hydroxyhexanoate_dh_ 100.0 8E-39 1.7E-43 295.9 32.1 319 11-338 2-349 (350)
43 cd08246 crotonyl_coA_red croto 100.0 5.7E-39 1.2E-43 301.3 31.3 309 21-338 29-392 (393)
44 TIGR01751 crot-CoA-red crotony 100.0 7.4E-39 1.6E-43 300.8 31.4 331 2-341 2-389 (398)
45 PRK13771 putative alcohol dehy 100.0 5.5E-39 1.2E-43 295.1 29.9 315 12-339 3-333 (334)
46 cd05279 Zn_ADH1 Liver alcohol 100.0 9.3E-39 2E-43 296.9 31.6 322 12-337 3-364 (365)
47 cd08291 ETR_like_1 2-enoyl thi 100.0 4.5E-39 9.8E-44 294.5 29.1 280 20-338 16-324 (324)
48 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1E-38 2.3E-43 295.1 31.7 317 11-337 2-350 (350)
49 cd08279 Zn_ADH_class_III Class 100.0 1.3E-38 2.8E-43 295.8 32.4 323 11-336 2-362 (363)
50 cd08283 FDH_like_1 Glutathione 100.0 1.8E-38 3.8E-43 297.0 32.7 323 12-338 3-385 (386)
51 cd08298 CAD2 Cinnamyl alcohol 100.0 1.6E-38 3.4E-43 291.4 31.5 303 21-337 16-329 (329)
52 cd08245 CAD Cinnamyl alcohol d 100.0 1.3E-38 2.8E-43 292.1 30.9 317 12-337 2-330 (330)
53 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3.9E-38 8.4E-43 290.8 32.4 319 11-338 2-344 (345)
54 cd08286 FDH_like_ADH2 formalde 100.0 5.3E-38 1.2E-42 289.8 31.9 319 12-339 3-345 (345)
55 KOG0025 Zn2+-binding dehydroge 100.0 2.1E-38 4.5E-43 267.8 25.5 302 3-339 15-352 (354)
56 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 7.5E-38 1.6E-42 287.8 31.0 309 22-339 14-338 (338)
57 cd08263 Zn_ADH10 Alcohol dehyd 100.0 8.3E-38 1.8E-42 290.9 31.0 324 12-338 3-367 (367)
58 PRK05396 tdh L-threonine 3-deh 100.0 8.7E-38 1.9E-42 288.0 30.6 317 11-340 2-341 (341)
59 cd08293 PTGR2 Prostaglandin re 100.0 5.5E-38 1.2E-42 289.7 29.0 283 19-339 20-345 (345)
60 PLN03154 putative allyl alcoho 100.0 6.8E-38 1.5E-42 288.9 29.4 284 20-342 25-348 (348)
61 cd08284 FDH_like_2 Glutathione 100.0 1.3E-37 2.8E-42 287.2 30.5 317 12-338 3-343 (344)
62 cd08282 PFDH_like Pseudomonas 100.0 4.2E-37 9.2E-42 286.8 33.6 320 12-338 3-374 (375)
63 cd08232 idonate-5-DH L-idonate 100.0 2.2E-37 4.8E-42 285.0 31.3 315 18-339 5-339 (339)
64 cd08259 Zn_ADH5 Alcohol dehydr 100.0 3.1E-37 6.6E-42 282.9 31.8 315 12-338 3-332 (332)
65 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.4E-37 7.3E-42 283.6 32.0 309 19-339 9-337 (337)
66 cd08265 Zn_ADH3 Alcohol dehydr 100.0 2.1E-37 4.5E-42 289.7 29.9 306 21-337 38-383 (384)
67 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.1E-37 4.5E-42 283.5 29.2 300 19-335 11-324 (325)
68 cd05285 sorbitol_DH Sorbitol d 100.0 3.9E-37 8.5E-42 283.9 30.7 310 18-337 6-341 (343)
69 cd08266 Zn_ADH_like1 Alcohol d 100.0 7.4E-37 1.6E-41 281.1 31.7 311 18-338 11-341 (342)
70 cd08235 iditol_2_DH_like L-idi 100.0 8.6E-37 1.9E-41 281.5 31.6 313 12-337 3-342 (343)
71 cd08242 MDR_like Medium chain 100.0 6.7E-37 1.4E-41 279.5 30.4 306 11-338 2-318 (319)
72 cd08292 ETR_like_2 2-enoyl thi 100.0 3.8E-37 8.2E-42 281.6 28.3 280 21-338 15-324 (324)
73 PLN02702 L-idonate 5-dehydroge 100.0 1.5E-36 3.2E-41 282.2 32.4 311 18-338 25-363 (364)
74 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1.2E-36 2.7E-41 280.3 31.1 304 12-338 3-341 (341)
75 cd08287 FDH_like_ADH3 formalde 100.0 2.9E-36 6.2E-41 278.3 31.4 314 12-338 3-344 (345)
76 cd08274 MDR9 Medium chain dehy 100.0 1.5E-36 3.3E-41 280.6 29.5 300 19-338 12-349 (350)
77 cd08295 double_bond_reductase_ 100.0 1.1E-36 2.3E-41 280.4 27.9 290 11-339 9-338 (338)
78 TIGR02825 B4_12hDH leukotriene 100.0 7.3E-37 1.6E-41 280.0 26.2 275 18-338 15-325 (325)
79 COG2130 Putative NADP-dependen 100.0 1.3E-36 2.7E-41 259.6 25.5 283 19-341 24-340 (340)
80 cd05281 TDH Threonine dehydrog 100.0 4.4E-36 9.6E-41 276.6 30.7 314 12-338 3-340 (341)
81 cd08236 sugar_DH NAD(P)-depend 100.0 1.1E-35 2.5E-40 274.1 31.3 313 12-337 3-343 (343)
82 TIGR03366 HpnZ_proposed putati 100.0 1E-36 2.2E-41 273.1 23.5 249 66-319 1-280 (280)
83 cd08294 leukotriene_B4_DH_like 100.0 7E-36 1.5E-40 273.8 28.6 274 20-339 19-329 (329)
84 cd08234 threonine_DH_like L-th 100.0 1.4E-35 3.1E-40 272.4 30.6 313 11-337 2-333 (334)
85 TIGR00692 tdh L-threonine 3-de 100.0 1.8E-35 3.9E-40 272.4 30.7 310 17-339 6-340 (340)
86 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.1E-35 2.4E-40 273.3 28.9 289 17-338 12-334 (336)
87 PRK10754 quinone oxidoreductas 100.0 1.8E-35 4E-40 270.9 28.6 296 7-338 1-326 (327)
88 KOG1198 Zinc-binding oxidoredu 100.0 5E-35 1.1E-39 265.6 26.7 286 18-340 16-346 (347)
89 PTZ00354 alcohol dehydrogenase 100.0 2E-34 4.4E-39 264.4 30.5 300 7-343 1-332 (334)
90 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.1E-34 6.8E-39 262.3 31.4 298 9-339 2-325 (325)
91 cd08276 MDR7 Medium chain dehy 100.0 3.9E-34 8.4E-39 262.7 30.9 306 18-339 11-336 (336)
92 cd08290 ETR 2-enoyl thioester 100.0 1.3E-34 2.7E-39 266.9 27.7 283 21-339 15-341 (341)
93 cd08244 MDR_enoyl_red Possible 100.0 2.9E-34 6.2E-39 262.4 29.5 284 19-338 12-323 (324)
94 cd08270 MDR4 Medium chain dehy 100.0 3.3E-34 7.2E-39 259.9 28.3 275 19-339 11-305 (305)
95 cd08249 enoyl_reductase_like e 100.0 5.3E-34 1.2E-38 262.5 29.4 298 12-339 3-339 (339)
96 TIGR02823 oxido_YhdH putative 100.0 6.4E-34 1.4E-38 260.2 29.4 290 17-339 9-323 (323)
97 cd08243 quinone_oxidoreductase 100.0 1.2E-33 2.6E-38 257.6 29.8 285 20-337 13-319 (320)
98 cd08258 Zn_ADH4 Alcohol dehydr 100.0 8.2E-34 1.8E-38 257.5 27.8 256 12-277 3-266 (306)
99 cd08250 Mgc45594_like Mgc45594 100.0 1.3E-33 2.7E-38 258.9 28.5 291 8-338 2-329 (329)
100 cd08248 RTN4I1 Human Reticulon 100.0 2.3E-33 4.9E-38 259.4 29.8 282 22-338 16-350 (350)
101 cd05282 ETR_like 2-enoyl thioe 100.0 1.2E-33 2.7E-38 258.1 27.2 281 21-338 13-323 (323)
102 cd08289 MDR_yhfp_like Yhfp put 100.0 3.6E-33 7.7E-38 255.6 28.6 298 9-339 2-326 (326)
103 cd08252 AL_MDR Arginate lyase 100.0 5.7E-33 1.2E-37 255.3 28.9 284 22-338 18-336 (336)
104 cd08269 Zn_ADH9 Alcohol dehydr 100.0 7.8E-33 1.7E-37 251.6 28.9 280 18-337 3-311 (312)
105 cd08288 MDR_yhdh Yhdh putative 100.0 5.8E-32 1.2E-36 247.3 30.2 298 9-339 2-324 (324)
106 cd08273 MDR8 Medium chain dehy 100.0 3.5E-32 7.7E-37 249.4 28.8 289 10-337 3-330 (331)
107 cd08253 zeta_crystallin Zeta-c 100.0 4.5E-32 9.8E-37 247.2 28.7 299 9-339 2-325 (325)
108 cd08247 AST1_like AST1 is a cy 100.0 6.3E-32 1.4E-36 250.0 29.9 296 12-339 3-352 (352)
109 cd05276 p53_inducible_oxidored 100.0 9.1E-32 2E-36 244.9 28.4 282 19-337 12-323 (323)
110 cd08271 MDR5 Medium chain dehy 100.0 3.2E-31 6.9E-36 242.1 29.6 285 20-339 13-325 (325)
111 cd05286 QOR2 Quinone oxidoredu 100.0 3.5E-31 7.6E-36 240.7 29.4 282 19-338 11-319 (320)
112 cd08251 polyketide_synthase po 100.0 3E-31 6.5E-36 239.7 27.1 273 29-337 2-303 (303)
113 cd08267 MDR1 Medium chain dehy 100.0 3.2E-31 7E-36 241.5 27.0 281 23-337 15-319 (319)
114 cd08272 MDR6 Medium chain dehy 100.0 8.4E-31 1.8E-35 239.2 29.5 296 11-339 2-326 (326)
115 cd05288 PGDH Prostaglandin deh 100.0 4.7E-31 1E-35 241.8 26.7 278 19-337 17-329 (329)
116 cd05289 MDR_like_2 alcohol deh 100.0 7.7E-31 1.7E-35 237.6 26.8 283 20-337 13-309 (309)
117 cd05188 MDR Medium chain reduc 100.0 7.8E-31 1.7E-35 233.2 25.0 229 36-277 1-234 (271)
118 TIGR02824 quinone_pig3 putativ 100.0 4.6E-30 1E-34 234.1 29.4 284 19-339 12-325 (325)
119 cd08268 MDR2 Medium chain dehy 100.0 7.6E-30 1.6E-34 233.0 29.3 288 19-338 12-327 (328)
120 cd05195 enoyl_red enoyl reduct 100.0 2.7E-29 5.9E-34 225.1 26.5 263 35-337 1-293 (293)
121 cd08275 MDR3 Medium chain dehy 100.0 7.7E-29 1.7E-33 227.5 28.9 282 20-339 12-337 (337)
122 cd08241 QOR1 Quinone oxidoredu 100.0 6E-29 1.3E-33 226.4 27.6 282 18-337 11-322 (323)
123 smart00829 PKS_ER Enoylreducta 100.0 1.9E-28 4E-33 219.5 24.8 258 39-337 2-288 (288)
124 KOG1196 Predicted NAD-dependen 100.0 1.1E-26 2.5E-31 198.0 22.1 270 30-341 33-342 (343)
125 cd08255 2-desacetyl-2-hydroxye 99.9 8.9E-26 1.9E-30 201.9 21.5 233 61-337 18-277 (277)
126 KOG1202 Animal-type fatty acid 99.9 1.2E-25 2.6E-30 218.4 15.5 277 20-342 1427-1744(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 4.9E-23 1.1E-27 157.7 9.5 108 34-149 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.5 1.4E-13 3E-18 108.7 9.9 113 191-304 1-130 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.4 4E-13 8.7E-18 105.6 5.2 111 224-337 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.3 2.2E-11 4.7E-16 113.0 12.0 162 169-339 189-376 (413)
131 PRK09424 pntA NAD(P) transhydr 99.1 2.6E-09 5.7E-14 101.7 16.0 130 179-309 163-334 (509)
132 PRK05476 S-adenosyl-L-homocyst 98.6 9.4E-07 2E-11 82.6 13.5 103 167-277 197-301 (425)
133 TIGR00561 pntA NAD(P) transhyd 98.5 7.2E-07 1.6E-11 85.0 11.7 98 179-277 162-286 (511)
134 PRK11873 arsM arsenite S-adeno 98.5 1.4E-06 3.1E-11 77.6 12.8 159 177-336 74-258 (272)
135 PRK08306 dipicolinate synthase 98.5 3.5E-06 7.6E-11 75.8 15.1 102 171-277 142-243 (296)
136 PLN02494 adenosylhomocysteinas 98.5 3.3E-06 7.1E-11 79.3 13.6 101 169-277 241-343 (477)
137 TIGR00936 ahcY adenosylhomocys 98.4 2.8E-06 6E-11 79.0 12.3 102 168-277 181-284 (406)
138 TIGR00518 alaDH alanine dehydr 98.4 5.5E-06 1.2E-10 76.9 12.1 98 180-277 166-269 (370)
139 TIGR01035 hemA glutamyl-tRNA r 98.3 2.1E-07 4.6E-12 87.8 1.2 185 65-281 88-283 (417)
140 COG4221 Short-chain alcohol de 98.3 5.1E-05 1.1E-09 64.8 15.1 113 180-292 5-157 (246)
141 cd05213 NAD_bind_Glutamyl_tRNA 98.2 1.7E-05 3.7E-10 72.0 11.5 109 144-257 139-251 (311)
142 PTZ00075 Adenosylhomocysteinas 98.2 2.7E-05 5.9E-10 73.4 12.1 123 146-277 218-343 (476)
143 TIGR02853 spore_dpaA dipicolin 98.1 8.5E-05 1.8E-09 66.5 14.1 94 179-277 149-242 (287)
144 PRK00517 prmA ribosomal protei 98.1 4.7E-05 1E-09 66.9 11.1 130 135-277 79-215 (250)
145 PF01488 Shikimate_DH: Shikima 98.0 2.1E-05 4.6E-10 62.2 6.4 100 179-281 10-115 (135)
146 PRK08324 short chain dehydroge 97.9 0.00012 2.6E-09 73.8 12.4 132 133-277 385-559 (681)
147 PRK12771 putative glutamate sy 97.7 3.8E-05 8.2E-10 75.7 5.3 96 178-274 134-252 (564)
148 COG2518 Pcm Protein-L-isoaspar 97.6 0.00048 1E-08 57.8 9.8 100 172-274 64-168 (209)
149 PF02826 2-Hacid_dh_C: D-isome 97.6 0.00035 7.6E-09 58.1 8.5 121 179-320 34-160 (178)
150 PLN03209 translocon at the inn 97.6 0.001 2.2E-08 64.5 12.5 103 175-277 74-209 (576)
151 PRK12742 oxidoreductase; Provi 97.6 0.0024 5.2E-08 55.3 13.9 98 180-277 5-133 (237)
152 PRK00045 hemA glutamyl-tRNA re 97.6 0.00048 1E-08 65.4 9.8 161 65-256 90-254 (423)
153 COG1748 LYS9 Saccharopine dehy 97.5 0.0008 1.7E-08 62.1 10.6 96 182-277 2-101 (389)
154 PRK00377 cbiT cobalt-precorrin 97.5 0.0019 4.2E-08 54.6 12.3 117 177-308 37-164 (198)
155 PF12847 Methyltransf_18: Meth 97.5 0.00061 1.3E-08 51.6 8.5 94 180-274 1-110 (112)
156 COG0686 Ald Alanine dehydrogen 97.5 0.00071 1.5E-08 59.6 9.1 96 181-276 168-269 (371)
157 COG2242 CobL Precorrin-6B meth 97.5 0.0027 5.8E-08 52.2 11.8 114 178-307 32-153 (187)
158 PF00670 AdoHcyase_NAD: S-aden 97.4 0.0051 1.1E-07 49.6 12.4 101 169-277 10-112 (162)
159 PF11017 DUF2855: Protein of u 97.4 0.01 2.2E-07 53.2 15.5 147 181-331 136-312 (314)
160 COG3967 DltE Short-chain dehyd 97.4 0.00092 2E-08 55.5 8.1 74 180-253 4-87 (245)
161 TIGR00406 prmA ribosomal prote 97.4 0.0021 4.6E-08 57.7 11.4 96 179-277 158-261 (288)
162 PRK05993 short chain dehydroge 97.4 0.0054 1.2E-07 54.7 13.7 73 180-253 3-85 (277)
163 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0027 5.9E-08 55.0 11.4 98 180-277 4-137 (238)
164 PF13460 NAD_binding_10: NADH( 97.3 0.0023 5E-08 53.1 10.4 91 184-277 1-99 (183)
165 COG0300 DltE Short-chain dehyd 97.3 0.0011 2.4E-08 58.1 8.5 77 179-255 4-95 (265)
166 KOG1205 Predicted dehydrogenas 97.3 0.0045 9.8E-08 54.8 12.4 110 179-288 10-163 (282)
167 PRK08265 short chain dehydroge 97.3 0.0074 1.6E-07 53.3 14.0 75 180-254 5-90 (261)
168 PRK06182 short chain dehydroge 97.3 0.0054 1.2E-07 54.5 13.1 74 180-254 2-84 (273)
169 PRK14175 bifunctional 5,10-met 97.3 0.0032 7E-08 55.9 11.1 95 160-277 137-232 (286)
170 PRK05693 short chain dehydroge 97.3 0.0086 1.9E-07 53.2 13.9 72 182-254 2-82 (274)
171 cd01080 NAD_bind_m-THF_DH_Cycl 97.3 0.0043 9.3E-08 50.8 10.9 99 159-280 22-121 (168)
172 cd01078 NAD_bind_H4MPT_DH NADP 97.2 0.0066 1.4E-07 51.1 11.7 78 179-256 26-109 (194)
173 KOG1209 1-Acyl dihydroxyaceton 97.2 0.0068 1.5E-07 50.7 11.1 99 179-277 5-140 (289)
174 PRK11705 cyclopropane fatty ac 97.2 0.0058 1.3E-07 57.1 12.1 113 160-276 147-268 (383)
175 PRK08339 short chain dehydroge 97.2 0.013 2.7E-07 51.9 13.8 75 180-254 7-95 (263)
176 PRK07825 short chain dehydroge 97.1 0.017 3.6E-07 51.3 14.3 74 181-254 5-88 (273)
177 PF01135 PCMT: Protein-L-isoas 97.1 0.0015 3.2E-08 55.7 7.0 101 172-274 64-171 (209)
178 PRK07109 short chain dehydroge 97.1 0.012 2.7E-07 54.0 13.5 75 180-254 7-95 (334)
179 PRK13940 glutamyl-tRNA reducta 97.1 0.013 2.9E-07 55.2 13.7 99 179-281 179-279 (414)
180 PRK07576 short chain dehydroge 97.1 0.011 2.3E-07 52.3 12.2 75 179-253 7-95 (264)
181 PRK06484 short chain dehydroge 97.1 0.016 3.4E-07 56.7 14.4 99 179-277 267-402 (520)
182 PRK06484 short chain dehydroge 97.1 0.017 3.7E-07 56.4 14.6 76 179-254 3-89 (520)
183 PRK13943 protein-L-isoaspartat 97.0 0.011 2.3E-07 53.8 12.0 96 177-273 77-178 (322)
184 PRK05872 short chain dehydroge 97.0 0.0054 1.2E-07 55.3 10.2 75 180-254 8-95 (296)
185 TIGR02469 CbiT precorrin-6Y C5 97.0 0.019 4.2E-07 44.0 12.1 97 178-275 17-122 (124)
186 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.012 2.5E-07 56.5 13.0 75 180-254 209-294 (450)
187 TIGR01809 Shik-DH-AROM shikima 97.0 0.0028 6.1E-08 56.7 8.1 76 180-255 124-201 (282)
188 PRK06505 enoyl-(acyl carrier p 97.0 0.03 6.4E-07 49.8 14.6 75 180-254 6-95 (271)
189 cd01065 NAD_bind_Shikimate_DH 97.0 0.0056 1.2E-07 49.4 9.2 96 179-277 17-118 (155)
190 PRK13942 protein-L-isoaspartat 97.0 0.0067 1.5E-07 51.9 10.0 99 174-274 70-175 (212)
191 PRK13944 protein-L-isoaspartat 97.0 0.015 3.2E-07 49.5 12.0 99 174-274 66-172 (205)
192 PRK12548 shikimate 5-dehydroge 97.0 0.0066 1.4E-07 54.6 10.2 75 179-253 124-208 (289)
193 COG0373 HemA Glutamyl-tRNA red 97.0 0.028 6.1E-07 52.4 14.5 100 179-282 176-281 (414)
194 PRK07231 fabG 3-ketoacyl-(acyl 97.0 0.021 4.6E-07 49.7 13.2 75 180-254 4-91 (251)
195 PRK03369 murD UDP-N-acetylmura 97.0 0.0057 1.2E-07 59.3 10.3 73 179-256 10-82 (488)
196 PRK08415 enoyl-(acyl carrier p 97.0 0.027 5.9E-07 50.1 13.9 98 180-277 4-145 (274)
197 PF03435 Saccharop_dh: Sacchar 96.9 0.0055 1.2E-07 57.5 9.7 93 184-276 1-99 (386)
198 PRK12939 short chain dehydroge 96.9 0.017 3.8E-07 50.2 12.4 75 180-254 6-94 (250)
199 PRK07523 gluconate 5-dehydroge 96.9 0.021 4.6E-07 50.0 13.0 75 180-254 9-97 (255)
200 PRK07060 short chain dehydroge 96.9 0.0082 1.8E-07 52.2 10.2 76 179-254 7-87 (245)
201 PRK06180 short chain dehydroge 96.9 0.03 6.6E-07 49.8 14.1 75 180-254 3-88 (277)
202 PRK14192 bifunctional 5,10-met 96.9 0.011 2.4E-07 52.7 11.0 93 162-277 140-233 (283)
203 PRK06139 short chain dehydroge 96.9 0.0068 1.5E-07 55.6 9.9 75 180-254 6-94 (330)
204 PRK08618 ornithine cyclodeamin 96.9 0.0044 9.5E-08 56.7 8.6 93 179-277 125-223 (325)
205 PF02353 CMAS: Mycolic acid cy 96.9 0.0055 1.2E-07 54.5 8.8 103 169-275 51-166 (273)
206 PRK00258 aroE shikimate 5-dehy 96.9 0.007 1.5E-07 54.1 9.4 95 179-275 121-221 (278)
207 COG2227 UbiG 2-polyprenyl-3-me 96.9 0.0074 1.6E-07 51.6 8.9 93 179-275 58-161 (243)
208 PRK12549 shikimate 5-dehydroge 96.9 0.0055 1.2E-07 54.9 8.5 72 179-253 125-201 (284)
209 PLN00203 glutamyl-tRNA reducta 96.9 0.013 2.9E-07 56.7 11.6 98 181-279 266-373 (519)
210 PRK07326 short chain dehydroge 96.8 0.015 3.2E-07 50.3 11.0 75 180-254 5-92 (237)
211 PRK06057 short chain dehydroge 96.8 0.012 2.5E-07 51.7 10.5 75 180-254 6-89 (255)
212 COG0169 AroE Shikimate 5-dehyd 96.8 0.0063 1.4E-07 54.1 8.6 82 169-254 112-200 (283)
213 PRK06200 2,3-dihydroxy-2,3-dih 96.8 0.011 2.3E-07 52.3 9.9 75 180-254 5-90 (263)
214 PRK12367 short chain dehydroge 96.8 0.0098 2.1E-07 52.1 9.5 74 180-254 13-89 (245)
215 PRK09242 tropinone reductase; 96.8 0.039 8.4E-07 48.4 13.4 75 180-254 8-98 (257)
216 PRK06603 enoyl-(acyl carrier p 96.8 0.053 1.2E-06 47.8 14.2 74 180-253 7-95 (260)
217 PRK14027 quinate/shikimate deh 96.8 0.012 2.7E-07 52.5 10.1 74 179-253 125-203 (283)
218 CHL00194 ycf39 Ycf39; Provisio 96.8 0.017 3.7E-07 52.6 11.2 94 183-277 2-111 (317)
219 PRK07832 short chain dehydroge 96.8 0.055 1.2E-06 48.0 14.2 72 183-254 2-88 (272)
220 PRK08267 short chain dehydroge 96.7 0.03 6.5E-07 49.2 12.3 73 182-254 2-87 (260)
221 COG2230 Cfa Cyclopropane fatty 96.7 0.006 1.3E-07 53.9 7.5 108 166-277 58-178 (283)
222 PRK12429 3-hydroxybutyrate deh 96.7 0.056 1.2E-06 47.2 14.0 75 180-254 3-91 (258)
223 PRK09186 flagellin modificatio 96.7 0.028 6.1E-07 49.2 11.9 74 180-253 3-92 (256)
224 TIGR00080 pimt protein-L-isoas 96.7 0.016 3.4E-07 49.7 9.9 98 175-274 72-176 (215)
225 PRK10538 malonic semialdehyde 96.7 0.054 1.2E-06 47.3 13.5 72 183-254 2-84 (248)
226 PRK07806 short chain dehydroge 96.7 0.021 4.6E-07 49.8 10.9 98 180-277 5-136 (248)
227 PRK12829 short chain dehydroge 96.7 0.014 2.9E-07 51.4 9.7 77 179-255 9-97 (264)
228 PRK12749 quinate/shikimate deh 96.7 0.019 4E-07 51.5 10.5 86 169-254 112-206 (288)
229 PRK00107 gidB 16S rRNA methylt 96.7 0.023 5E-07 47.5 10.4 97 176-274 41-144 (187)
230 PRK09072 short chain dehydroge 96.7 0.044 9.6E-07 48.3 12.9 75 180-254 4-90 (263)
231 TIGR03325 BphB_TodD cis-2,3-di 96.7 0.017 3.7E-07 50.9 10.2 74 180-253 4-88 (262)
232 PRK06500 short chain dehydroge 96.7 0.015 3.3E-07 50.6 9.8 75 180-254 5-90 (249)
233 PRK14189 bifunctional 5,10-met 96.7 0.019 4.2E-07 50.9 10.2 95 160-277 137-232 (285)
234 PRK08159 enoyl-(acyl carrier p 96.7 0.061 1.3E-06 47.8 13.7 75 179-253 8-97 (272)
235 PRK08085 gluconate 5-dehydroge 96.6 0.056 1.2E-06 47.3 13.3 75 180-254 8-96 (254)
236 PRK04457 spermidine synthase; 96.6 0.049 1.1E-06 48.2 12.8 95 179-274 65-176 (262)
237 PRK07424 bifunctional sterol d 96.6 0.018 3.8E-07 54.2 10.3 75 180-254 177-255 (406)
238 PRK13394 3-hydroxybutyrate deh 96.6 0.044 9.4E-07 48.1 12.4 75 180-254 6-94 (262)
239 PRK08263 short chain dehydroge 96.6 0.066 1.4E-06 47.6 13.7 74 181-254 3-87 (275)
240 PRK05866 short chain dehydroge 96.6 0.01 2.3E-07 53.4 8.3 75 180-254 39-127 (293)
241 PRK10792 bifunctional 5,10-met 96.6 0.026 5.7E-07 50.1 10.5 95 160-277 138-233 (285)
242 PF01262 AlaDh_PNT_C: Alanine 96.6 0.006 1.3E-07 50.1 6.1 96 181-277 20-141 (168)
243 PRK07062 short chain dehydroge 96.6 0.016 3.4E-07 51.2 9.2 75 180-254 7-97 (265)
244 PRK12550 shikimate 5-dehydroge 96.6 0.021 4.5E-07 50.8 9.8 77 168-253 110-187 (272)
245 PRK08594 enoyl-(acyl carrier p 96.6 0.088 1.9E-06 46.3 13.9 98 180-277 6-149 (257)
246 PRK06079 enoyl-(acyl carrier p 96.5 0.075 1.6E-06 46.6 13.4 74 180-254 6-93 (252)
247 PRK07533 enoyl-(acyl carrier p 96.5 0.076 1.6E-06 46.7 13.4 75 180-254 9-98 (258)
248 COG1052 LdhA Lactate dehydroge 96.5 0.032 6.9E-07 50.8 10.9 118 179-318 144-267 (324)
249 COG2226 UbiE Methylase involve 96.5 0.032 7E-07 48.2 10.3 99 178-277 49-158 (238)
250 PRK07063 short chain dehydroge 96.5 0.017 3.8E-07 50.7 9.1 75 180-254 6-96 (260)
251 PRK14191 bifunctional 5,10-met 96.5 0.037 8.1E-07 49.1 10.9 95 160-277 136-231 (285)
252 PRK06196 oxidoreductase; Provi 96.5 0.018 4E-07 52.3 9.5 75 180-254 25-109 (315)
253 PRK07574 formate dehydrogenase 96.5 0.051 1.1E-06 50.7 12.3 109 180-308 191-304 (385)
254 PRK05854 short chain dehydroge 96.5 0.016 3.5E-07 52.7 9.0 75 180-254 13-103 (313)
255 PRK07831 short chain dehydroge 96.5 0.03 6.4E-07 49.4 10.4 76 179-254 15-107 (262)
256 PRK14194 bifunctional 5,10-met 96.5 0.022 4.8E-07 50.9 9.3 95 160-277 138-233 (301)
257 PRK06128 oxidoreductase; Provi 96.4 0.12 2.6E-06 46.6 14.4 98 180-277 54-193 (300)
258 cd05212 NAD_bind_m-THF_DH_Cycl 96.4 0.058 1.3E-06 42.7 10.7 95 160-277 7-102 (140)
259 PF02882 THF_DHG_CYH_C: Tetrah 96.4 0.037 8E-07 44.8 9.7 96 159-277 14-110 (160)
260 PRK07814 short chain dehydroge 96.4 0.022 4.7E-07 50.3 9.3 76 179-254 8-97 (263)
261 PRK08217 fabG 3-ketoacyl-(acyl 96.4 0.03 6.5E-07 48.8 10.1 74 180-253 4-91 (253)
262 PRK05867 short chain dehydroge 96.4 0.021 4.6E-07 50.0 9.1 75 180-254 8-96 (253)
263 PRK05876 short chain dehydroge 96.4 0.02 4.4E-07 51.0 9.0 75 180-254 5-93 (275)
264 PF06325 PrmA: Ribosomal prote 96.4 0.0053 1.2E-07 55.0 5.2 124 143-277 128-261 (295)
265 TIGR00507 aroE shikimate 5-deh 96.4 0.026 5.7E-07 50.2 9.6 104 169-277 105-216 (270)
266 PRK09291 short chain dehydroge 96.4 0.025 5.3E-07 49.6 9.4 73 181-253 2-82 (257)
267 COG0569 TrkA K+ transport syst 96.4 0.029 6.2E-07 48.4 9.5 82 183-265 2-86 (225)
268 PRK06949 short chain dehydroge 96.4 0.023 5E-07 49.8 9.1 76 179-254 7-96 (258)
269 PLN03139 formate dehydrogenase 96.4 0.043 9.2E-07 51.2 11.1 109 179-307 197-310 (386)
270 PRK13243 glyoxylate reductase; 96.4 0.049 1.1E-06 50.0 11.4 107 180-308 149-260 (333)
271 PRK06101 short chain dehydroge 96.4 0.14 3E-06 44.5 13.8 72 182-253 2-80 (240)
272 PRK05717 oxidoreductase; Valid 96.4 0.034 7.4E-07 48.7 10.0 76 179-254 8-94 (255)
273 PRK07984 enoyl-(acyl carrier p 96.3 0.12 2.7E-06 45.6 13.6 74 180-253 5-93 (262)
274 PF10727 Rossmann-like: Rossma 96.3 0.016 3.5E-07 45.1 6.8 81 181-268 10-91 (127)
275 PLN03075 nicotianamine synthas 96.3 0.044 9.6E-07 48.9 10.5 104 171-275 115-233 (296)
276 PF03807 F420_oxidored: NADP o 96.3 0.089 1.9E-06 38.5 10.7 86 183-274 1-93 (96)
277 PRK06194 hypothetical protein; 96.3 0.024 5.3E-07 50.6 9.1 75 180-254 5-93 (287)
278 TIGR03840 TMPT_Se_Te thiopurin 96.3 0.032 6.9E-07 47.7 9.2 97 179-277 33-154 (213)
279 PRK06940 short chain dehydroge 96.3 0.056 1.2E-06 48.1 11.3 96 181-277 2-127 (275)
280 PRK07985 oxidoreductase; Provi 96.3 0.16 3.4E-06 45.7 14.3 98 180-277 48-187 (294)
281 COG2264 PrmA Ribosomal protein 96.3 0.037 8E-07 49.4 9.8 127 143-277 129-265 (300)
282 PRK06398 aldose dehydrogenase; 96.3 0.078 1.7E-06 46.6 12.1 70 180-254 5-82 (258)
283 PRK07889 enoyl-(acyl carrier p 96.3 0.14 3.1E-06 44.9 13.6 75 180-254 6-95 (256)
284 cd01075 NAD_bind_Leu_Phe_Val_D 96.3 0.046 1E-06 46.2 10.0 49 179-227 26-74 (200)
285 PRK12828 short chain dehydroge 96.3 0.028 6E-07 48.5 8.9 75 180-254 6-92 (239)
286 PRK07024 short chain dehydroge 96.3 0.04 8.8E-07 48.4 10.0 74 181-254 2-88 (257)
287 PF02254 TrkA_N: TrkA-N domain 96.3 0.15 3.2E-06 38.8 11.9 91 184-275 1-96 (116)
288 PRK14188 bifunctional 5,10-met 96.3 0.043 9.3E-07 49.2 10.0 95 160-277 137-232 (296)
289 PRK15469 ghrA bifunctional gly 96.3 0.047 1E-06 49.6 10.5 90 179-277 134-228 (312)
290 PRK07370 enoyl-(acyl carrier p 96.3 0.098 2.1E-06 46.0 12.4 98 180-277 5-149 (258)
291 PLN02928 oxidoreductase family 96.3 0.044 9.6E-07 50.5 10.5 115 179-308 157-282 (347)
292 PRK06718 precorrin-2 dehydroge 96.3 0.012 2.6E-07 49.8 6.3 92 179-275 8-100 (202)
293 PRK07890 short chain dehydroge 96.3 0.025 5.3E-07 49.6 8.6 75 180-254 4-92 (258)
294 cd05311 NAD_bind_2_malic_enz N 96.3 0.069 1.5E-06 46.1 11.1 102 169-275 13-128 (226)
295 PRK07502 cyclohexadienyl dehyd 96.2 0.037 7.9E-07 50.2 9.8 90 182-276 7-101 (307)
296 PRK07677 short chain dehydroge 96.2 0.03 6.4E-07 49.0 9.0 74 181-254 1-88 (252)
297 PF00106 adh_short: short chai 96.2 0.056 1.2E-06 43.8 10.1 74 182-255 1-91 (167)
298 KOG1201 Hydroxysteroid 17-beta 96.2 0.029 6.3E-07 49.6 8.6 76 179-254 36-124 (300)
299 PRK07453 protochlorophyllide o 96.2 0.023 5.1E-07 51.8 8.5 74 180-253 5-92 (322)
300 PRK07478 short chain dehydroge 96.2 0.03 6.5E-07 49.0 9.0 75 180-254 5-93 (254)
301 PRK08317 hypothetical protein; 96.2 0.042 9.1E-07 47.5 9.7 102 174-276 13-125 (241)
302 PRK07402 precorrin-6B methylas 96.2 0.16 3.4E-06 42.8 12.9 98 177-275 37-142 (196)
303 TIGR01470 cysG_Nterm siroheme 96.2 0.093 2E-06 44.6 11.3 92 180-275 8-100 (205)
304 PLN02253 xanthoxin dehydrogena 96.2 0.039 8.5E-07 49.1 9.6 75 180-254 17-104 (280)
305 KOG1210 Predicted 3-ketosphing 96.2 0.079 1.7E-06 47.2 11.0 110 179-288 31-185 (331)
306 PRK08177 short chain dehydroge 96.2 0.039 8.5E-07 47.4 9.2 72 182-254 2-81 (225)
307 PRK03659 glutathione-regulated 96.2 0.078 1.7E-06 52.8 12.4 95 181-276 400-499 (601)
308 PLN00141 Tic62-NAD(P)-related 96.2 0.091 2E-06 46.0 11.7 99 179-277 15-133 (251)
309 PRK05884 short chain dehydroge 96.1 0.033 7.3E-07 47.9 8.7 71 183-253 2-78 (223)
310 PRK08589 short chain dehydroge 96.1 0.038 8.3E-07 49.0 9.3 74 180-254 5-92 (272)
311 PF13241 NAD_binding_7: Putati 96.1 0.0093 2E-07 44.6 4.5 88 180-277 6-93 (103)
312 PTZ00098 phosphoethanolamine N 96.1 0.047 1E-06 48.4 9.7 102 175-277 47-158 (263)
313 TIGR02992 ectoine_eutC ectoine 96.1 0.028 6.2E-07 51.4 8.4 93 179-277 127-226 (326)
314 PRK07340 ornithine cyclodeamin 96.1 0.03 6.5E-07 50.7 8.4 93 179-277 123-219 (304)
315 PRK14178 bifunctional 5,10-met 96.1 0.072 1.6E-06 47.2 10.5 95 160-277 131-226 (279)
316 TIGR02356 adenyl_thiF thiazole 96.1 0.048 1E-06 46.2 9.2 34 180-213 20-54 (202)
317 PRK06841 short chain dehydroge 96.1 0.048 1E-06 47.7 9.6 74 180-254 14-99 (255)
318 PRK12747 short chain dehydroge 96.1 0.12 2.7E-06 45.0 12.2 98 180-277 3-146 (252)
319 PRK06125 short chain dehydroge 96.1 0.041 8.9E-07 48.4 9.1 75 180-254 6-91 (259)
320 PRK01581 speE spermidine synth 96.1 0.4 8.6E-06 44.2 15.4 137 133-274 105-267 (374)
321 PRK08862 short chain dehydroge 96.1 0.043 9.3E-07 47.4 9.0 74 180-253 4-92 (227)
322 COG2910 Putative NADH-flavin r 96.0 0.059 1.3E-06 44.2 8.9 92 183-278 2-107 (211)
323 PRK07069 short chain dehydroge 96.0 0.16 3.5E-06 44.1 12.7 71 184-254 2-89 (251)
324 PRK08017 oxidoreductase; Provi 96.0 0.059 1.3E-06 47.1 9.9 72 182-254 3-84 (256)
325 TIGR00438 rrmJ cell division p 96.0 0.12 2.5E-06 43.3 11.2 96 175-275 27-146 (188)
326 PRK08340 glucose-1-dehydrogena 96.0 0.042 9.1E-07 48.3 9.0 72 183-254 2-86 (259)
327 PRK10669 putative cation:proto 96.0 0.082 1.8E-06 52.2 11.6 92 182-274 418-514 (558)
328 PRK06483 dihydromonapterin red 96.0 0.056 1.2E-06 46.7 9.4 74 181-254 2-84 (236)
329 PRK14176 bifunctional 5,10-met 96.0 0.08 1.7E-06 47.0 10.2 95 160-277 143-238 (287)
330 PLN02233 ubiquinone biosynthes 96.0 0.07 1.5E-06 47.2 10.1 100 177-277 70-184 (261)
331 PRK07067 sorbitol dehydrogenas 96.0 0.053 1.1E-06 47.6 9.3 75 180-254 5-90 (257)
332 TIGR01318 gltD_gamma_fam gluta 96.0 0.027 5.8E-07 54.3 7.9 77 179-256 139-238 (467)
333 PRK06197 short chain dehydroge 96.0 0.034 7.3E-07 50.3 8.2 75 179-253 14-104 (306)
334 PRK06719 precorrin-2 dehydroge 96.0 0.03 6.6E-07 45.3 7.1 89 179-274 11-99 (157)
335 PRK08643 acetoin reductase; Va 95.9 0.049 1.1E-06 47.7 9.0 74 181-254 2-89 (256)
336 PRK06482 short chain dehydroge 95.9 0.067 1.5E-06 47.5 9.9 73 182-254 3-86 (276)
337 PRK08213 gluconate 5-dehydroge 95.9 0.057 1.2E-06 47.4 9.4 76 179-254 10-99 (259)
338 PRK07035 short chain dehydroge 95.9 0.052 1.1E-06 47.4 9.0 75 180-254 7-95 (252)
339 PRK14967 putative methyltransf 95.9 0.17 3.7E-06 43.5 12.1 126 178-320 34-193 (223)
340 PRK13255 thiopurine S-methyltr 95.9 0.057 1.2E-06 46.3 9.0 95 179-275 36-155 (218)
341 PRK06138 short chain dehydroge 95.9 0.047 1E-06 47.6 8.8 75 180-254 4-91 (252)
342 PRK12937 short chain dehydroge 95.9 0.35 7.6E-06 41.8 14.2 99 179-277 3-141 (245)
343 PRK00312 pcm protein-L-isoaspa 95.9 0.089 1.9E-06 44.9 10.2 97 175-274 73-174 (212)
344 PRK07774 short chain dehydroge 95.9 0.053 1.2E-06 47.2 9.0 75 180-254 5-93 (250)
345 PRK06701 short chain dehydroge 95.9 0.35 7.7E-06 43.4 14.5 76 179-254 44-134 (290)
346 PRK12481 2-deoxy-D-gluconate 3 95.9 0.081 1.8E-06 46.3 10.1 75 180-254 7-93 (251)
347 PRK14172 bifunctional 5,10-met 95.9 0.098 2.1E-06 46.3 10.4 95 160-277 137-232 (278)
348 PRK12475 thiamine/molybdopteri 95.9 0.054 1.2E-06 49.7 9.2 82 180-262 23-133 (338)
349 PLN02366 spermidine synthase 95.9 0.11 2.4E-06 47.0 11.0 95 179-274 90-205 (308)
350 PRK03562 glutathione-regulated 95.9 0.062 1.3E-06 53.6 10.3 94 181-275 400-498 (621)
351 PRK06172 short chain dehydroge 95.9 0.055 1.2E-06 47.3 9.0 75 180-254 6-94 (253)
352 PRK00811 spermidine synthase; 95.8 0.13 2.9E-06 46.0 11.4 95 179-274 75-190 (283)
353 KOG0069 Glyoxylate/hydroxypyru 95.8 0.087 1.9E-06 47.8 10.0 108 179-307 160-272 (336)
354 PRK14177 bifunctional 5,10-met 95.8 0.1 2.3E-06 46.3 10.3 95 160-277 138-233 (284)
355 PRK07074 short chain dehydroge 95.8 0.083 1.8E-06 46.3 9.9 74 181-254 2-87 (257)
356 PRK12938 acetyacetyl-CoA reduc 95.8 0.25 5.4E-06 42.9 12.9 74 181-254 3-91 (246)
357 PRK11036 putative S-adenosyl-L 95.8 0.12 2.5E-06 45.6 10.8 95 179-275 43-149 (255)
358 PRK12809 putative oxidoreducta 95.8 0.04 8.6E-07 55.3 8.6 75 180-255 309-406 (639)
359 PRK08251 short chain dehydroge 95.8 0.065 1.4E-06 46.6 9.0 73 181-253 2-90 (248)
360 PRK14179 bifunctional 5,10-met 95.8 0.091 2E-06 46.7 9.8 95 160-277 137-232 (284)
361 PRK06179 short chain dehydroge 95.8 0.05 1.1E-06 48.1 8.4 71 181-254 4-83 (270)
362 PRK06720 hypothetical protein; 95.8 0.082 1.8E-06 43.4 9.0 75 180-254 15-103 (169)
363 PRK12936 3-ketoacyl-(acyl-carr 95.8 0.11 2.3E-06 45.1 10.3 75 180-254 5-90 (245)
364 PRK07666 fabG 3-ketoacyl-(acyl 95.8 0.049 1.1E-06 47.2 8.1 74 181-254 7-94 (239)
365 PRK13656 trans-2-enoyl-CoA red 95.8 0.26 5.7E-06 45.8 12.9 76 179-255 39-142 (398)
366 TIGR00417 speE spermidine synt 95.7 0.16 3.4E-06 45.2 11.4 94 180-274 72-185 (270)
367 PRK04148 hypothetical protein; 95.7 0.073 1.6E-06 41.6 8.0 74 179-256 15-89 (134)
368 PRK06181 short chain dehydroge 95.7 0.054 1.2E-06 47.6 8.4 74 181-254 1-88 (263)
369 COG0027 PurT Formate-dependent 95.7 0.12 2.7E-06 45.8 10.1 157 179-338 10-195 (394)
370 KOG0725 Reductases with broad 95.7 0.074 1.6E-06 47.2 9.1 77 179-255 6-100 (270)
371 PRK14190 bifunctional 5,10-met 95.7 0.14 3E-06 45.6 10.6 95 160-277 137-232 (284)
372 PRK14180 bifunctional 5,10-met 95.7 0.12 2.7E-06 45.8 10.2 95 160-277 137-232 (282)
373 PRK12746 short chain dehydroge 95.7 0.28 6.2E-06 42.7 12.7 75 180-254 5-100 (254)
374 PRK05875 short chain dehydroge 95.7 0.078 1.7E-06 47.0 9.2 74 180-253 6-95 (276)
375 PLN02244 tocopherol O-methyltr 95.7 0.08 1.7E-06 48.8 9.5 98 179-277 117-225 (340)
376 PRK14982 acyl-ACP reductase; P 95.7 0.053 1.2E-06 49.6 8.1 94 179-278 153-249 (340)
377 TIGR01289 LPOR light-dependent 95.6 0.094 2E-06 47.7 9.8 74 181-254 3-91 (314)
378 PLN02780 ketoreductase/ oxidor 95.6 0.065 1.4E-06 48.9 8.7 44 179-222 51-95 (320)
379 PRK15409 bifunctional glyoxyla 95.6 0.17 3.6E-06 46.3 11.3 107 180-308 144-256 (323)
380 PRK06463 fabG 3-ketoacyl-(acyl 95.6 0.12 2.5E-06 45.3 10.0 74 180-254 6-89 (255)
381 PRK08261 fabG 3-ketoacyl-(acyl 95.6 0.016 3.5E-07 55.6 4.8 92 175-277 28-125 (450)
382 PRK12480 D-lactate dehydrogena 95.6 0.19 4.2E-06 46.0 11.5 105 180-308 145-254 (330)
383 PRK07454 short chain dehydroge 95.6 0.091 2E-06 45.5 9.1 75 180-254 5-93 (241)
384 PRK14169 bifunctional 5,10-met 95.6 0.14 3E-06 45.5 10.1 95 160-277 135-230 (282)
385 TIGR03589 PseB UDP-N-acetylglu 95.6 0.096 2.1E-06 47.9 9.6 75 180-254 3-84 (324)
386 PRK13581 D-3-phosphoglycerate 95.6 0.21 4.6E-06 48.9 12.4 88 180-276 139-231 (526)
387 PF05368 NmrA: NmrA-like famil 95.6 0.14 3.1E-06 44.2 10.3 70 184-254 1-74 (233)
388 PRK11207 tellurite resistance 95.6 0.055 1.2E-06 45.7 7.4 94 179-275 29-134 (197)
389 PRK08644 thiamine biosynthesis 95.6 0.089 1.9E-06 44.9 8.7 34 180-213 27-61 (212)
390 PRK06124 gluconate 5-dehydroge 95.6 0.092 2E-06 46.0 9.2 76 179-254 9-98 (256)
391 PRK06198 short chain dehydroge 95.5 0.1 2.2E-06 45.7 9.5 75 180-254 5-94 (260)
392 PRK08277 D-mannonate oxidoredu 95.5 0.1 2.2E-06 46.3 9.5 74 180-253 9-96 (278)
393 PRK07904 short chain dehydroge 95.5 0.071 1.5E-06 46.8 8.4 76 179-254 6-97 (253)
394 cd01079 NAD_bind_m-THF_DH NAD 95.5 0.11 2.4E-06 43.3 8.7 114 160-277 32-158 (197)
395 PLN02490 MPBQ/MSBQ methyltrans 95.5 0.13 2.9E-06 47.1 10.1 97 179-276 112-216 (340)
396 PRK07097 gluconate 5-dehydroge 95.5 0.14 3E-06 45.1 10.1 75 180-254 9-97 (265)
397 PRK05557 fabG 3-ketoacyl-(acyl 95.5 0.54 1.2E-05 40.6 13.8 75 180-254 4-93 (248)
398 COG1179 Dinucleotide-utilizing 95.5 0.37 8E-06 41.4 11.8 98 180-277 29-155 (263)
399 PRK14173 bifunctional 5,10-met 95.5 0.16 3.4E-06 45.3 10.1 95 160-277 134-229 (287)
400 PRK08642 fabG 3-ketoacyl-(acyl 95.5 0.36 7.8E-06 42.0 12.6 74 180-253 4-90 (253)
401 PRK08410 2-hydroxyacid dehydro 95.5 0.21 4.5E-06 45.4 11.3 111 180-316 144-260 (311)
402 PRK01683 trans-aconitate 2-met 95.5 0.19 4.1E-06 44.2 10.8 95 178-275 29-130 (258)
403 PRK06935 2-deoxy-D-gluconate 3 95.5 0.095 2.1E-06 46.0 8.9 75 179-254 13-101 (258)
404 PRK06914 short chain dehydroge 95.5 0.085 1.8E-06 46.9 8.7 74 181-254 3-91 (280)
405 PRK08220 2,3-dihydroxybenzoate 95.4 0.34 7.5E-06 42.1 12.4 69 180-254 7-86 (252)
406 PRK14186 bifunctional 5,10-met 95.4 0.17 3.7E-06 45.3 10.3 95 160-277 137-232 (297)
407 TIGR01832 kduD 2-deoxy-D-gluco 95.4 0.098 2.1E-06 45.5 8.8 75 180-254 4-90 (248)
408 PF02558 ApbA: Ketopantoate re 95.4 0.024 5.2E-07 45.5 4.6 89 184-275 1-101 (151)
409 PRK11088 rrmA 23S rRNA methylt 95.4 0.16 3.4E-06 45.2 10.2 95 179-276 84-182 (272)
410 COG0111 SerA Phosphoglycerate 95.4 0.15 3.3E-06 46.5 10.2 108 180-308 141-253 (324)
411 PRK12823 benD 1,6-dihydroxycyc 95.4 0.14 3E-06 45.0 9.8 74 180-253 7-93 (260)
412 PLN02396 hexaprenyldihydroxybe 95.4 0.16 3.5E-06 46.2 10.3 95 179-275 130-235 (322)
413 PRK14618 NAD(P)H-dependent gly 95.4 0.087 1.9E-06 48.2 8.8 90 182-275 5-104 (328)
414 PRK12826 3-ketoacyl-(acyl-carr 95.4 0.082 1.8E-06 45.9 8.3 75 180-254 5-93 (251)
415 PRK08703 short chain dehydroge 95.4 0.12 2.5E-06 44.8 9.1 41 180-220 5-46 (239)
416 PRK15181 Vi polysaccharide bio 95.4 0.11 2.4E-06 48.0 9.4 86 167-253 2-99 (348)
417 TIGR00477 tehB tellurite resis 95.4 0.2 4.2E-06 42.2 10.1 95 179-276 29-134 (195)
418 PRK07791 short chain dehydroge 95.3 0.11 2.3E-06 46.6 8.9 76 179-254 4-102 (286)
419 PLN02989 cinnamyl-alcohol dehy 95.3 0.075 1.6E-06 48.4 8.1 74 180-253 4-86 (325)
420 PRK04266 fibrillarin; Provisio 95.3 0.27 5.9E-06 42.4 11.0 127 176-309 68-205 (226)
421 PRK14166 bifunctional 5,10-met 95.3 0.19 4.2E-06 44.6 10.1 95 160-277 136-231 (282)
422 cd01487 E1_ThiF_like E1_ThiF_l 95.3 0.14 3.1E-06 42.2 8.9 32 183-214 1-33 (174)
423 TIGR01963 PHB_DH 3-hydroxybuty 95.3 0.11 2.5E-06 45.2 8.8 73 182-254 2-88 (255)
424 PF01209 Ubie_methyltran: ubiE 95.3 0.029 6.4E-07 48.6 4.9 100 177-277 44-155 (233)
425 PRK08762 molybdopterin biosynt 95.3 0.16 3.5E-06 47.5 10.1 77 180-256 134-237 (376)
426 PRK06997 enoyl-(acyl carrier p 95.3 0.11 2.5E-06 45.7 8.8 75 180-254 5-94 (260)
427 PRK05653 fabG 3-ketoacyl-(acyl 95.3 0.12 2.6E-06 44.6 8.8 75 180-254 4-92 (246)
428 PRK08264 short chain dehydroge 95.3 0.15 3.2E-06 44.1 9.3 71 180-254 5-83 (238)
429 PRK06077 fabG 3-ketoacyl-(acyl 95.3 0.71 1.5E-05 40.0 13.8 97 181-277 6-142 (252)
430 PLN02516 methylenetetrahydrofo 95.2 0.22 4.7E-06 44.6 10.3 95 160-277 146-241 (299)
431 PF01408 GFO_IDH_MocA: Oxidore 95.2 0.39 8.5E-06 36.5 10.7 88 183-275 2-92 (120)
432 PRK08291 ectoine utilization p 95.2 0.1 2.2E-06 47.9 8.5 93 179-277 130-229 (330)
433 PRK06113 7-alpha-hydroxysteroi 95.2 0.12 2.6E-06 45.3 8.8 75 180-254 10-98 (255)
434 PRK07775 short chain dehydroge 95.2 0.18 3.9E-06 44.8 10.0 74 181-254 10-97 (274)
435 PLN02986 cinnamyl-alcohol dehy 95.2 0.099 2.2E-06 47.6 8.6 74 180-253 4-86 (322)
436 PRK14170 bifunctional 5,10-met 95.2 0.2 4.3E-06 44.5 10.0 95 160-277 136-231 (284)
437 PRK07688 thiamine/molybdopteri 95.2 0.13 2.8E-06 47.3 9.1 77 180-256 23-128 (339)
438 PRK08287 cobalt-precorrin-6Y C 95.2 0.26 5.7E-06 41.0 10.4 114 178-309 29-151 (187)
439 PRK08690 enoyl-(acyl carrier p 95.2 0.13 2.8E-06 45.4 9.0 75 180-254 5-94 (261)
440 PRK13403 ketol-acid reductoiso 95.2 0.19 4.1E-06 45.4 9.8 88 179-274 14-105 (335)
441 PRK14183 bifunctional 5,10-met 95.2 0.23 4.9E-06 44.1 10.2 95 160-277 136-231 (281)
442 PF03446 NAD_binding_2: NAD bi 95.2 0.45 9.7E-06 38.7 11.4 86 183-275 3-94 (163)
443 PRK14184 bifunctional 5,10-met 95.2 0.21 4.5E-06 44.4 10.0 95 160-277 136-235 (286)
444 PRK06522 2-dehydropantoate 2-r 95.2 0.12 2.6E-06 46.6 8.9 89 183-274 2-99 (304)
445 PRK12384 sorbitol-6-phosphate 95.2 0.12 2.7E-06 45.2 8.7 74 181-254 2-91 (259)
446 PRK14187 bifunctional 5,10-met 95.2 0.21 4.6E-06 44.6 10.0 95 160-277 139-234 (294)
447 PRK08416 7-alpha-hydroxysteroi 95.2 0.12 2.6E-06 45.5 8.6 74 180-253 7-96 (260)
448 PRK08628 short chain dehydroge 95.2 0.15 3.4E-06 44.6 9.3 75 180-254 6-93 (258)
449 PRK10258 biotin biosynthesis p 95.2 0.15 3.3E-06 44.7 9.2 144 179-328 41-203 (251)
450 PF00899 ThiF: ThiF family; I 95.2 0.11 2.4E-06 40.8 7.6 91 181-271 2-119 (135)
451 TIGR02752 MenG_heptapren 2-hep 95.2 0.16 3.4E-06 43.9 9.2 99 176-276 41-152 (231)
452 PRK08303 short chain dehydroge 95.2 0.12 2.6E-06 46.8 8.7 74 180-253 7-105 (305)
453 TIGR02354 thiF_fam2 thiamine b 95.1 0.16 3.4E-06 43.0 8.8 34 180-213 20-54 (200)
454 PRK06953 short chain dehydroge 95.1 0.17 3.6E-06 43.3 9.3 72 182-254 2-80 (222)
455 PRK06932 glycerate dehydrogena 95.1 0.18 4E-06 45.8 9.8 104 180-309 146-254 (314)
456 PLN02819 lysine-ketoglutarate 95.1 0.24 5.2E-06 51.9 11.7 96 180-275 568-679 (1042)
457 PRK09135 pteridine reductase; 95.1 0.15 3.2E-06 44.2 9.1 74 180-253 5-94 (249)
458 PLN02896 cinnamyl-alcohol dehy 95.1 0.16 3.5E-06 46.9 9.7 75 179-253 8-88 (353)
459 PRK08328 hypothetical protein; 95.1 0.26 5.6E-06 42.7 10.3 93 180-273 26-148 (231)
460 PRK14171 bifunctional 5,10-met 95.1 0.23 5.1E-06 44.1 10.0 95 160-277 138-233 (288)
461 PRK05565 fabG 3-ketoacyl-(acyl 95.1 0.11 2.4E-06 45.0 8.0 74 181-254 5-93 (247)
462 cd00755 YgdL_like Family of ac 95.1 0.71 1.5E-05 39.9 12.8 33 181-213 11-44 (231)
463 PRK14185 bifunctional 5,10-met 95.1 0.25 5.4E-06 44.1 10.1 95 160-277 136-235 (293)
464 TIGR00446 nop2p NOL1/NOP2/sun 95.1 0.44 9.6E-06 42.2 11.9 99 178-277 69-201 (264)
465 TIGR02622 CDP_4_6_dhtase CDP-g 95.1 0.12 2.6E-06 47.7 8.6 75 180-254 3-85 (349)
466 TIGR02355 moeB molybdopterin s 95.1 0.15 3.3E-06 44.4 8.8 82 181-263 24-132 (240)
467 PRK12744 short chain dehydroge 95.0 0.46 9.9E-06 41.6 12.0 75 180-254 7-99 (257)
468 PRK05650 short chain dehydroge 95.0 0.12 2.6E-06 45.7 8.3 72 183-254 2-87 (270)
469 PRK06141 ornithine cyclodeamin 95.0 0.33 7.2E-06 44.2 11.3 93 179-277 123-221 (314)
470 PRK12769 putative oxidoreducta 95.0 0.08 1.7E-06 53.3 7.9 76 179-255 325-423 (654)
471 PRK14182 bifunctional 5,10-met 95.0 0.27 5.8E-06 43.6 10.2 95 160-277 136-231 (282)
472 COG2519 GCD14 tRNA(1-methylade 95.0 0.33 7.1E-06 42.1 10.3 101 176-277 90-197 (256)
473 PF02719 Polysacc_synt_2: Poly 95.0 0.091 2E-06 46.8 7.2 71 184-254 1-87 (293)
474 PLN02730 enoyl-[acyl-carrier-p 95.0 0.3 6.5E-06 44.2 10.7 38 179-217 7-47 (303)
475 COG3288 PntA NAD/NADP transhyd 95.0 0.08 1.7E-06 46.9 6.6 102 175-277 158-283 (356)
476 PRK07578 short chain dehydroge 95.0 0.57 1.2E-05 39.2 11.9 60 183-254 2-65 (199)
477 KOG1208 Dehydrogenases with di 95.0 0.16 3.5E-06 46.1 8.8 99 179-277 33-172 (314)
478 PRK06114 short chain dehydroge 94.9 0.21 4.5E-06 43.7 9.5 75 180-254 7-96 (254)
479 COG0421 SpeE Spermidine syntha 94.9 0.35 7.7E-06 43.1 10.7 92 182-274 78-189 (282)
480 PRK07417 arogenate dehydrogena 94.9 0.22 4.7E-06 44.5 9.6 88 183-276 2-92 (279)
481 PRK14167 bifunctional 5,10-met 94.9 0.27 5.9E-06 44.0 9.9 95 160-277 136-235 (297)
482 PRK09310 aroDE bifunctional 3- 94.9 0.27 5.8E-06 47.5 10.7 81 171-256 322-402 (477)
483 PLN02897 tetrahydrofolate dehy 94.9 0.23 4.9E-06 45.2 9.5 95 160-277 193-288 (345)
484 PRK08226 short chain dehydroge 94.9 0.21 4.6E-06 43.8 9.4 75 180-254 5-92 (263)
485 PRK08945 putative oxoacyl-(acy 94.9 0.18 3.9E-06 43.8 8.8 42 179-220 10-52 (247)
486 PLN02520 bifunctional 3-dehydr 94.9 0.14 3.1E-06 50.0 8.9 71 180-253 378-448 (529)
487 TIGR02964 xanthine_xdhC xanthi 94.9 0.2 4.2E-06 43.9 8.9 37 179-215 98-134 (246)
488 PRK08063 enoyl-(acyl carrier p 94.9 0.16 3.5E-06 44.1 8.5 75 180-254 3-92 (250)
489 PRK14181 bifunctional 5,10-met 94.9 0.33 7E-06 43.2 10.2 95 160-277 132-231 (287)
490 PRK01438 murD UDP-N-acetylmura 94.8 0.27 5.8E-06 47.6 10.7 71 179-255 14-89 (480)
491 PRK14103 trans-aconitate 2-met 94.8 0.42 9.1E-06 42.0 11.1 92 178-274 27-125 (255)
492 PRK08278 short chain dehydroge 94.8 0.31 6.7E-06 43.2 10.3 75 180-254 5-100 (273)
493 PRK14106 murD UDP-N-acetylmura 94.8 0.18 4E-06 48.3 9.4 71 180-255 4-79 (450)
494 PRK14193 bifunctional 5,10-met 94.8 0.33 7.2E-06 43.2 10.1 95 160-277 137-234 (284)
495 PRK00141 murD UDP-N-acetylmura 94.8 0.24 5.2E-06 47.9 10.1 73 179-255 13-85 (473)
496 TIGR02415 23BDH acetoin reduct 94.8 0.18 3.9E-06 44.0 8.6 72 183-254 2-87 (254)
497 KOG1199 Short-chain alcohol de 94.8 0.13 2.8E-06 41.6 6.8 76 180-255 8-94 (260)
498 PRK05599 hypothetical protein; 94.8 0.16 3.4E-06 44.4 8.1 71 183-254 2-87 (246)
499 PF13478 XdhC_C: XdhC Rossmann 94.8 0.13 2.9E-06 40.5 6.8 83 184-272 1-84 (136)
500 PRK03612 spermidine synthase; 94.8 0.34 7.4E-06 47.3 11.2 95 179-274 296-414 (521)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.1e-65 Score=455.07 Aligned_cols=324 Identities=41% Similarity=0.665 Sum_probs=292.8
Q ss_pred ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199 7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK 86 (344)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 86 (344)
+++++++...+...++++++++.|+|+++||+|++.|+|+|++|++..+|.++...+|.++|||++|+|+++|+.|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 35566777766666689999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166 (344)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ 166 (344)
+||||.+.+.+.+|++|.||++|+++.|++.... |...+|+|+||+++++.+++++|+++++.+||++.|++.
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGi 153 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGI 153 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCee
Confidence 9999999788889999999999999999985332 335789999999999999999999999999999999999
Q ss_pred HhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCcc
Q 019199 167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD 246 (344)
Q Consensus 167 ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 246 (344)
|.|++++.... +||++|+|.|+|++|.+++|+|+++|++|+++++++++++.+ +++|++++++..+++..+...+.+|
T Consensus 154 T~y~alk~~~~-~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a-~~lGAd~~i~~~~~~~~~~~~~~~d 231 (339)
T COG1064 154 TTYRALKKANV-KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGADHVINSSDSDALEAVKEIAD 231 (339)
T ss_pred eEeeehhhcCC-CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHH-HHhCCcEEEEcCCchhhHHhHhhCc
Confidence 99999988555 999999999999999999999999999999999999999999 7999999999877766666655699
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCCC--c-cccCCceee----------eechHhHHHHHHHHHhCCCccce-E
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--K-VKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQI-E 312 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~-~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~-~ 312 (344)
+++|+++ +.+++.+++.|+++|+++++|... . ..++.+.+. .+++.++++++++.++|+++|.+ +
T Consensus 232 ~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e 310 (339)
T COG1064 232 AIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILE 310 (339)
T ss_pred EEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEe
Confidence 9999999 788999999999999999999873 2 224444333 56678999999999999999999 7
Q ss_pred EEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199 313 TIPIENVNEALERLIKRDVKYRFVIDIQ 340 (344)
Q Consensus 313 ~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 340 (344)
.++++|+++|++.|.+++..||+||++.
T Consensus 311 ~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 311 TIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred eECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 9999999999999999999999999864
No 2
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-62 Score=419.90 Aligned_cols=342 Identities=51% Similarity=0.852 Sum_probs=314.2
Q ss_pred CCccccccceeeeeecCCCC--CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEe
Q 019199 1 MTSETASKDCLGWAARDPSG--VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEV 78 (344)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~ 78 (344)
|++|..+.++..|..++..+ +++..++++|+|.++||+|+++|+|||++|++.+.|.++...+|.++|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 77889999999999998888 4555999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc
Q 019199 79 GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA 158 (344)
Q Consensus 79 G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a 158 (344)
|++|++|++||+|-+-+..-+|++|.||.++..++|++.-..+++.-.||..+.|+||+|+++++..+++||+++++++|
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a 160 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA 160 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence 99999999999999999888999999999999999999888888999999999999999999999999999999999999
Q ss_pred cccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCC-CHHH
Q 019199 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSS-DLEQ 237 (344)
Q Consensus 159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~-~~~~ 237 (344)
|++.|++.|.|.+|...+. .||+++-|.|+|++|..++|+||++|.+|+++++++.+.+++.+.+|++..++.. ++++
T Consensus 161 APlLCaGITvYspLk~~g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~ 239 (360)
T KOG0023|consen 161 APLLCAGITVYSPLKRSGL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDI 239 (360)
T ss_pred cchhhcceEEeehhHHcCC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHH
Confidence 9999999999999998887 7999999999977999999999999999999999997777777899999888877 7888
Q ss_pred HHHhcCCccEEEECCC--CchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHh
Q 019199 238 MKALGKSLDFIIDTAS--GDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAA 304 (344)
Q Consensus 238 ~~~~~~~~dvvid~~g--~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 304 (344)
++++.+-.|..++++. ....+..+++.++++|++|++|.+ ....++.+++. .+++.+.++++++.++
T Consensus 240 ~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~ 319 (360)
T KOG0023|consen 240 MKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVAR 319 (360)
T ss_pred HHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHc
Confidence 8776554555555555 555699999999999999999998 56667777665 5678999999999999
Q ss_pred CCCccceEEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199 305 HKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343 (344)
Q Consensus 305 g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 343 (344)
+.++++++..+++++++|+++|.+++..+|+||++..++
T Consensus 320 ~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~ 358 (360)
T KOG0023|consen 320 GLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKSL 358 (360)
T ss_pred CCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence 999999999999999999999999999999999998775
No 3
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=9e-54 Score=396.31 Aligned_cols=337 Identities=53% Similarity=0.945 Sum_probs=286.4
Q ss_pred cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199 6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF 85 (344)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 85 (344)
.+||+++|...+.++.++..+++.|+|+++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 88 (360)
T PLN02586 9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKF 88 (360)
T ss_pred chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCcc
Confidence 58999999998878889999999999999999999999999999999888765544678999999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (344)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~ 165 (344)
++||+|++.+...+|++|.+|++|.++.|++..+.+.....+|...+|+|+||+.++++.++++|+++++++++++++.+
T Consensus 89 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~ 168 (360)
T PLN02586 89 KEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAG 168 (360)
T ss_pred CCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcch
Confidence 99999987666568999999999999999986543322222233347999999999999999999999999999999999
Q ss_pred hHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCc
Q 019199 166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245 (344)
Q Consensus 166 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 245 (344)
.|+|+++.....+++|++|||.|+|++|++++|+||.+|++|++++.+++++..+.+++|++.+++..+.+.+.+..+++
T Consensus 169 ~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~ 248 (360)
T PLN02586 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTM 248 (360)
T ss_pred HHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCC
Confidence 99999987777668999999999999999999999999999998888877766565789999999877655555555679
Q ss_pred cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEE
Q 019199 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETI 314 (344)
Q Consensus 246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (344)
|++||++|...++..++++++++|+++.+|.. ....++...+. ....++++++++++++|++++.+++|
T Consensus 249 D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~~~ 328 (360)
T PLN02586 249 DYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADIELI 328 (360)
T ss_pred CEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcEEEE
Confidence 99999999876799999999999999999865 33333332211 12346899999999999999877899
Q ss_pred eCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199 315 PIENVNEALERLIKRDVKYRFVIDIQNS 342 (344)
Q Consensus 315 ~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 342 (344)
+|+|+++||+.+.+++..||+|+.+...
T Consensus 329 ~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 356 (360)
T PLN02586 329 RMDEINTAMERLAKSDVRYRFVIDVANS 356 (360)
T ss_pred eHHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 9999999999999998889999987543
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3e-54 Score=374.07 Aligned_cols=327 Identities=27% Similarity=0.414 Sum_probs=281.1
Q ss_pred cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
|++++.+.++...+|+++++++++|++|||+||+.++|+||+|...++|..+.. +|.++|||++|+|+++|+.|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 567788888888999999999999999999999999999999999999998865 9999999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCcc-ccccccccCCCCc-----------c--CCcceeEEEEecceEEEcCCCC
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGTI-----------T--KGGYSSYIVVHERYCYKIANDY 153 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~-~~~~~~~~~~~~~-----------~--~g~~~~~~~~~~~~~~~~P~~~ 153 (344)
||+|+. .+.+.|++|.+|.+|+++.|... ...+.+...+|.. . -++|++|..+++.+++|++++.
T Consensus 80 GDhVI~-~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVIL-LFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEE-cccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 999954 45569999999999999999754 1111122222211 1 2489999999999999999999
Q ss_pred CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS 232 (344)
Q Consensus 154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~ 232 (344)
+++.++.+.|..+|.+.+..+..++++|++|.|.|.|++|++++|-|+..|+ +|++++.+++|++++ ++||+++++|.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A-~~fGAT~~vn~ 237 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELA-KKFGATHFVNP 237 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHH-HhcCCceeecc
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999 79999999999
Q ss_pred CCHH-H---HHHhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCceee---------ee---ch
Q 019199 233 SDLE-Q---MKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLN---------IG---GT 292 (344)
Q Consensus 233 ~~~~-~---~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~~---------~~---~~ 292 (344)
.+.. . +.+++ +++|++||++|+...+++++++..++|+.+.+|.. ....++++.+. ++ .+
T Consensus 238 ~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~ 317 (366)
T COG1062 238 KEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR 317 (366)
T ss_pred hhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence 8763 3 33445 49999999999999999999999999999999987 33334555544 11 23
Q ss_pred HhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 293 KDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 293 ~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
.++..+++|+.+|+|.. .+ +.++|||++|||++|.+++.. |-||.
T Consensus 318 ~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 68999999999999953 44 899999999999999998876 44443
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-52 Score=360.71 Aligned_cols=319 Identities=26% Similarity=0.424 Sum_probs=272.3
Q ss_pred eeeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCC---CCCCCCcccccceEEEEecCCCCCCC
Q 019199 11 LGWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRFK 86 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~~~~~~ 86 (344)
++++++ +++++++++.++|++ .|+||+|++.++|||+||++.+.+.... .+.|+++|||.+|+|+++|+.|++++
T Consensus 6 ~A~vl~-g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~Lk 84 (354)
T KOG0024|consen 6 LALVLR-GKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLK 84 (354)
T ss_pred ceeEEE-ccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccc
Confidence 444443 578899999999997 9999999999999999999998765542 24799999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166 (344)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ 166 (344)
+||||++-|.. +|+.|+.|++|+++.|+.-.+.-++ ..+|++++|...+++.++|+||+++++++| +..++.
T Consensus 85 VGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLs 156 (354)
T KOG0024|consen 85 VGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLS 156 (354)
T ss_pred cCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcc-cccchh
Confidence 99999998876 7999999999999999987554443 457999999999999999999999999998 444688
Q ss_pred HhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCH---HHHHHh-
Q 019199 167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDL---EQMKAL- 241 (344)
Q Consensus 167 ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~~~~~~- 241 (344)
.+||+.++..- ++|++|||+|+|++|+.++..||++|+ +|++++..++|++.+ +++|++.+.+.... +.+.+.
T Consensus 157 V~~HAcr~~~v-k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~A-k~~Ga~~~~~~~~~~~~~~~~~~v 234 (354)
T KOG0024|consen 157 VGVHACRRAGV-KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELA-KKFGATVTDPSSHKSSPQELAELV 234 (354)
T ss_pred hhhhhhhhcCc-ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHH-HHhCCeEEeeccccccHHHHHHHH
Confidence 89999987776 999999999999999999999999999 999999999999999 57999988776552 222222
Q ss_pred ----c-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eech-HhHHHHHHHHHhC
Q 019199 242 ----G-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGT-KDTQEMLEYCAAH 305 (344)
Q Consensus 242 ----~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~g 305 (344)
+ ..+|++|||+|...+++.++.+++.+|++++.|+. ...+|+..... +.+. .+++.+++++.+|
T Consensus 235 ~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sG 314 (354)
T KOG0024|consen 235 EKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSG 314 (354)
T ss_pred HhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcC
Confidence 2 45999999999999999999999999999999987 56666655544 2222 4899999999999
Q ss_pred CCc--cce-EEEeCccHHHHHHHHHcCCcc-eEEEEEeC
Q 019199 306 KIY--PQI-ETIPIENVNEALERLIKRDVK-YRFVIDIQ 340 (344)
Q Consensus 306 ~~~--~~~-~~~~~~~~~~a~~~~~~~~~~-gkvvi~~~ 340 (344)
+++ +.+ +.|+++++.+||+.+.+++.. -|+++..+
T Consensus 315 ki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 315 KIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred CcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 996 455 899999999999999998753 48888765
No 6
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-51 Score=383.72 Aligned_cols=335 Identities=52% Similarity=0.921 Sum_probs=279.0
Q ss_pred ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199 7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK 86 (344)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 86 (344)
+.++.++...+.++.++..+++.|+|+++||+|||.++|+|++|++.+.|......+|.++|||++|+|+++|+++++|+
T Consensus 4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~ 83 (375)
T PLN02178 4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFK 83 (375)
T ss_pred cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccC
Confidence 45677888877778888889999999999999999999999999999887654345689999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166 (344)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ 166 (344)
+||+|++.+...+|++|.+|++|+++.|++..+.+......|....|+|+||+.++++.++++|+++++++++++++...
T Consensus 84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 163 (375)
T PLN02178 84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI 163 (375)
T ss_pred CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence 99999866655579999999999999999864322211111223369999999999999999999999999999999999
Q ss_pred HhHHHHHhccC-CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCc
Q 019199 167 TVYTPMMRHKM-NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245 (344)
Q Consensus 167 ta~~~l~~~~~-~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 245 (344)
|+|+++..... .++|++|+|.|+|++|++++|+|+.+|++|++++.+++++..+.+++|++++++..+.+.+.+..+++
T Consensus 164 ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~ 243 (375)
T PLN02178 164 TVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTM 243 (375)
T ss_pred HHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCC
Confidence 99999876653 36899999999999999999999999999999888766543444789999998876654444445679
Q ss_pred cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEE
Q 019199 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETI 314 (344)
Q Consensus 246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (344)
|++||++|.+..+..++++++++|+++.+|.. ....++...+. ....++++++++++++|++++.+++|
T Consensus 244 D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~~ 323 (375)
T PLN02178 244 DFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELI 323 (375)
T ss_pred cEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEEE
Confidence 99999999886689999999999999999975 33333332221 22347899999999999999888889
Q ss_pred eCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199 315 PIENVNEALERLIKRDVKYRFVIDIQN 341 (344)
Q Consensus 315 ~~~~~~~a~~~~~~~~~~gkvvi~~~~ 341 (344)
+|+|+++||+.+.+++..||+|+.+.+
T Consensus 324 ~l~~~~~A~~~~~~~~~~gkvvi~~~~ 350 (375)
T PLN02178 324 KMSDINSAMDRLAKSDVRYRFVIDVAN 350 (375)
T ss_pred eHHHHHHHHHHHHcCCCceEEEEEecc
Confidence 999999999999999988999999843
No 7
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.4e-50 Score=374.84 Aligned_cols=342 Identities=47% Similarity=0.844 Sum_probs=286.7
Q ss_pred CCccccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecC
Q 019199 1 MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80 (344)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~ 80 (344)
|.+...-.++++++..++.+.+++++++.|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~ 80 (357)
T PLN02514 1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS 80 (357)
T ss_pred CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence 44444555688888887888899999999999999999999999999999998887654445688999999999999999
Q ss_pred CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP 160 (344)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~ 160 (344)
.+++|++||+|++.+....|++|.+|++|.++.|.+..+.+.+....|....|+|+||+.++...++++|+++++.++++
T Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~ 160 (357)
T PLN02514 81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAP 160 (357)
T ss_pred CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhh
Confidence 99999999999876655579999999999999998763332211112333469999999999999999999999999999
Q ss_pred cchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH
Q 019199 161 LLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240 (344)
Q Consensus 161 l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 240 (344)
+++.+.|||+++......++|++|+|+|+|++|++++|+||.+|++|++++.+++++..+.+++|++.+++..+.+.+.+
T Consensus 161 l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 161 LLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 99999999999987777689999999998999999999999999999999888888777767899988887665555555
Q ss_pred hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCcc
Q 019199 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYP 309 (344)
Q Consensus 241 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~ 309 (344)
...++|++||++|...++..++++++++|+++.+|.. ...+++...+. .....+++++++++++|++++
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~ 320 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTS 320 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcC
Confidence 5568999999999776799999999999999999976 32233222211 223468999999999999988
Q ss_pred ceEEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199 310 QIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342 (344)
Q Consensus 310 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 342 (344)
.+++|+++|+.+||+.+.+++..||+++.++.+
T Consensus 321 ~i~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~ 353 (357)
T PLN02514 321 MIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGS 353 (357)
T ss_pred cEEEEcHHHHHHHHHHHHcCCCceeEEEEcccc
Confidence 788999999999999999999889999998753
No 8
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.7e-50 Score=341.88 Aligned_cols=330 Identities=25% Similarity=0.384 Sum_probs=286.8
Q ss_pred cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199 6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF 85 (344)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 85 (344)
...+.++.+..++..+|.++++++++|..+||+||+.++++|++|...++|..+...+|.++|||++|+|+.+|..|..+
T Consensus 4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~v 83 (375)
T KOG0022|consen 4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTV 83 (375)
T ss_pred CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcccc
Confidence 45677888888889999999999999999999999999999999999999988778899999999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCCcccccc--ccccCCCCcc-------------CCcceeEEEEecceEEEcC
Q 019199 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF--NAIDADGTIT-------------KGGYSSYIVVHERYCYKIA 150 (344)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~--~~~~~~~~~~-------------~g~~~~~~~~~~~~~~~~P 150 (344)
++||+|+ ..+.+-|++|.+|.+++++.|.++.... ..+.+||... ..+|+||-.+++..+.||+
T Consensus 84 k~GD~Vi-plf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 84 KPGDHVI-PLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred CCCCEEe-eccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 9999995 4455689999999999999998863332 2222232221 2489999999999999999
Q ss_pred CCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEE
Q 019199 151 NDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKF 229 (344)
Q Consensus 151 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~ 229 (344)
+..+++.++.+.|...|+|.+..+.+.+++|+++.|+|.|++|+++++-||+.|| +||.++-++++.+.+ ++||+++.
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a-k~fGaTe~ 241 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKA-KEFGATEF 241 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHH-HhcCccee
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999 79999999
Q ss_pred EeCCCH-----HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC---CccccCCceee-----------
Q 019199 230 VVSSDL-----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP---SKVKFSPASLN----------- 288 (344)
Q Consensus 230 v~~~~~-----~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~---~~~~~~~~~~~----------- 288 (344)
+|+.+. +.+.+++ +|+|+.|||+|+..++++++.+.+.+ |+-+.+|.. ....+.++.+.
T Consensus 242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FG 321 (375)
T KOG0022|consen 242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFG 321 (375)
T ss_pred cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecc
Confidence 998753 3455555 78999999999999999999999998 999999987 34445555444
Q ss_pred -eechHhHHHHHHHHHhCCCc--cc-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 289 -IGGTKDTQEMLEYCAAHKIY--PQ-IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 289 -~~~~~~~~~~~~~~~~g~~~--~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+..+.++..+++.+-++++. .. +|++||+++++||+.|.+++.. |-|+.
T Consensus 322 G~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 322 GFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred cccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 44568899999999999885 34 4999999999999999999976 66664
No 9
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-48 Score=358.63 Aligned_cols=322 Identities=20% Similarity=0.284 Sum_probs=260.4
Q ss_pred cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhc-CCCC--CCCCCCCcccccceEEEEecCCCCC
Q 019199 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTR-NKHG--DSKYPLVPGHEIVGIVKEVGHNVSR 84 (344)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~~G~~~~~ 84 (344)
.++++.+++ +++.+++++.+.| +.++||||||.++|+|++|++.+. |..+ ...+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~-~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVA-GKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEe-cCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 455666665 6677899999987 689999999999999999998775 3332 2357899999999999999 6789
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA 164 (344)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~ 164 (344)
|++||+|++.+. .+|++|.+|+.|.++.|++..+. +.........|+|+||++++++.++++|+++++.+++ +..+
T Consensus 79 ~~vGdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~--g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~ 154 (343)
T PRK09880 79 LKEGQTVAINPS-KPCGHCKYCLSHNENQCTTMRFF--GSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEP 154 (343)
T ss_pred CCCCCEEEECCC-CCCcCChhhcCCChhhCCCccee--ecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcH
Confidence 999999988765 48999999999999999885431 1110001236999999999999999999999987655 5567
Q ss_pred hhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH--Hh
Q 019199 165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK--AL 241 (344)
Q Consensus 165 ~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--~~ 241 (344)
+.+||+++.+... .+|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++.+.+..+ +.
T Consensus 155 ~~~a~~al~~~~~-~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~~~~ 232 (343)
T PRK09880 155 LAVAIHAAHQAGD-LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADKLVNPQNDDLDHYKAE 232 (343)
T ss_pred HHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcEEecCCcccHHHHhcc
Confidence 7899999987766 689999999999999999999999999 689999999999888 689999999876643221 12
Q ss_pred cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eechHhHHHHHHHHHhCCCcc--
Q 019199 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGTKDTQEMLEYCAAHKIYP-- 309 (344)
Q Consensus 242 ~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~-- 309 (344)
.+++|++||++|++.++..++++++++|+++.+|.. ....++...+. ....++++++++++.+|++++
T Consensus 233 ~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~ 312 (343)
T PRK09880 233 KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLP 312 (343)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchh
Confidence 246999999999877799999999999999999975 32333322221 222467899999999999975
Q ss_pred ce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 310 QI-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 310 ~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
.+ ++|+++|+++|++.+.+++..||+++.+
T Consensus 313 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 313 LLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred heEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 34 8999999999999999988789999863
No 10
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.1e-48 Score=355.14 Aligned_cols=304 Identities=29% Similarity=0.464 Sum_probs=261.0
Q ss_pred CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (344)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~ 99 (344)
..++++++|.|+|+++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+.+++|++||+|++.+...+
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 92 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRT 92 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCc
Confidence 46889999999999999999999999999999999887654445789999999999999999999999999988776668
Q ss_pred CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (344)
Q Consensus 100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 179 (344)
|+.|.+|+.|..+.|++..+ . |....|+|+||+.+++..++++|+++++.+++++++.+.|||+++.. ..++
T Consensus 93 c~~c~~c~~g~~~~c~~~~~--~-----g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~ 164 (329)
T TIGR02822 93 CGVCRYCRRGAENLCPASRY--T-----GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLP 164 (329)
T ss_pred CCCChHHhCcCcccCCCccc--C-----CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCC
Confidence 99999999999999987533 1 22346899999999999999999999999999999999999999975 4569
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD 259 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~ 259 (344)
+|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++++++..+.. .+++|+++++.+...++.
T Consensus 165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a-~~~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~ 238 (329)
T TIGR02822 165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLA-LALGAASAGGAYDTP-----PEPLDAAILFAPAGGLVP 238 (329)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHhCCceeccccccC-----cccceEEEECCCcHHHHH
Confidence 99999999999999999999999999999999999998888 799999988754321 246899999888777899
Q ss_pred HHHHhcccCCEEEEEcCC-Cc-cccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccHHHHHHHHH
Q 019199 260 AYMSLLKVAGVYVLVGFP-SK-VKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLI 327 (344)
Q Consensus 260 ~~~~~l~~~G~iv~~g~~-~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~~~ 327 (344)
.++++++++|+++.+|.. .. ..++...+. ...++++.+++++++++++++..++|+|+|+++|++.+.
T Consensus 239 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~~ 318 (329)
T TIGR02822 239 PALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYPLSEADRALRDLK 318 (329)
T ss_pred HHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHHH
Confidence 999999999999999975 22 223222111 123467888999999999986668999999999999999
Q ss_pred cCCcceEEEE
Q 019199 328 KRDVKYRFVI 337 (344)
Q Consensus 328 ~~~~~gkvvi 337 (344)
+++..||+||
T Consensus 319 ~~~~~Gkvvl 328 (329)
T TIGR02822 319 AGRFDGAAVL 328 (329)
T ss_pred cCCCceEEEe
Confidence 9999999987
No 11
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.3e-47 Score=356.95 Aligned_cols=327 Identities=24% Similarity=0.394 Sum_probs=267.5
Q ss_pred cceeeeeecCC------CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCC
Q 019199 8 KDCLGWAARDP------SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHN 81 (344)
Q Consensus 8 ~~~~~~~~~~~------~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~ 81 (344)
||+..+..++. ++.+++++++.|+|.++||+||+.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|+.
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 45555555443 47789999999999999999999999999999999888654 356899999999999999999
Q ss_pred CCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccc-cccccCC-------------CCccCCcceeEEEEecceEE
Q 019199 82 VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDAD-------------GTITKGGYSSYIVVHERYCY 147 (344)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~~-------------~~~~~g~~~~~~~~~~~~~~ 147 (344)
++++++||+|++.+. ..|+.|.+|+.|.++.|++.... ..+.... +....|+|+||+.++++.++
T Consensus 80 v~~~~~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFV-PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccC-CCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 999999999987543 37999999999999999875321 1111100 00113799999999999999
Q ss_pred EcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC
Q 019199 148 KIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA 226 (344)
Q Consensus 148 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~ 226 (344)
++|+++++.+|+.+++++.|||+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++++.+ +++|+
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga 237 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGA 237 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCC
Confidence 9999999999999999999999998766677999999999999999999999999999 699999999999888 78999
Q ss_pred cEEEeCCCHHHHH---Hhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCCceee---------e-
Q 019199 227 DKFVVSSDLEQMK---ALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPASLN---------I- 289 (344)
Q Consensus 227 ~~~v~~~~~~~~~---~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~~~~~---------~- 289 (344)
+++++..+.+..+ +.+ +++|++||++|...++..++++++++|+++.+|.. . ..+++...+. +
T Consensus 238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 317 (371)
T cd08281 238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM 317 (371)
T ss_pred ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEec
Confidence 9999887654332 332 47999999999877799999999999999999875 2 2233332211 1
Q ss_pred e---chHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 290 G---GTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 290 ~---~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
. ..++++++++++++|++++ .+ ++|+++|+++||+.+.+++..+|+|+
T Consensus 318 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 1 1467899999999999974 34 89999999999999999988888763
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=3.4e-47 Score=353.66 Aligned_cols=326 Identities=24% Similarity=0.359 Sum_probs=265.4
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+++.....++.+++++++.|+|.++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+.+++|++||+
T Consensus 3 ~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gdr 82 (368)
T TIGR02818 3 RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDH 82 (368)
T ss_pred eEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCCE
Confidence 45555555667889999999999999999999999999999988887654567899999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccc-cccccC--------CC-----CccCCcceeEEEEecceEEEcCCCCCcc
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDA--------DG-----TITKGGYSSYIVVHERYCYKIANDYPLA 156 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~--------~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~~~ 156 (344)
|++.+. ..|++|.+|+.|..+.|++.... +.+... .| ....|+|+||+.+|++.++++|++++++
T Consensus 83 V~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~ 161 (368)
T TIGR02818 83 VIPLYT-AECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLE 161 (368)
T ss_pred EEEcCC-CCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHH
Confidence 987654 48999999999999999874210 001100 01 0124799999999999999999999999
Q ss_pred cccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCC-
Q 019199 157 LAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD- 234 (344)
Q Consensus 157 ~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~- 234 (344)
+++.+++++.|||+++.+...+++|++|||+|+|++|++++|+||.+|+ +|++++.++++++.+ +++|++++++..+
T Consensus 162 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 162 EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATDCVNPNDY 240 (368)
T ss_pred HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCeEEccccc
Confidence 9999999999999998776677999999999999999999999999999 799999999999888 7899999988763
Q ss_pred -H---HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-C--ccccCCceee---------ee---chH
Q 019199 235 -L---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-S--KVKFSPASLN---------IG---GTK 293 (344)
Q Consensus 235 -~---~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~--~~~~~~~~~~---------~~---~~~ 293 (344)
. +.+.+++ +++|++||++|++.++..++++++++ |+++.+|.. . ...+..+.+. .. ...
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 2 2233333 58999999999877799999999886 999999975 2 2222222211 11 245
Q ss_pred hHHHHHHHHHhCCCcc--c-eEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 294 DTQEMLEYCAAHKIYP--Q-IETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 294 ~~~~~~~~~~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+++++++++.++++++ . .++|+++|+++|++.+.+++. .|++|.+
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 7899999999999864 3 489999999999999988764 6999874
No 13
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=5.2e-47 Score=349.12 Aligned_cols=318 Identities=25% Similarity=0.379 Sum_probs=264.3
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd 89 (344)
+++++. +++.+++++++.|+|.++||+||+.++++|++|++.+.+... ....|.++|||++|+|+++|+++++|++||
T Consensus 2 ka~~~~-~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 80 (339)
T cd08239 2 RGAVFP-GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGD 80 (339)
T ss_pred eEEEEe-cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCCC
Confidence 344444 456789999999999999999999999999999988766533 223578999999999999999999999999
Q ss_pred EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY 169 (344)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~ 169 (344)
+|+..+.. .|++|..|++|+.+.|.+..+.+ |....|+|++|+.++++.++++|+++++.+|+.+++++.|||
T Consensus 81 ~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~------g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~ 153 (339)
T cd08239 81 RVMVYHYV-GCGACRNCRRGWMQLCTSKRAAY------GWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAY 153 (339)
T ss_pred EEEECCCC-CCCCChhhhCcCcccCcCccccc------ccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHH
Confidence 99886654 89999999999999998764311 223569999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH--HHHHhc--CC
Q 019199 170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKALG--KS 244 (344)
Q Consensus 170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~~--~~ 244 (344)
+++.... +++|++|||+|+|++|++++|+|+.+|++ |+++++++++++.+ +++|++.++++++.+ .+.+.. ++
T Consensus 154 ~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~ 231 (339)
T cd08239 154 HALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGADFVINSGQDDVQEIRELTSGAG 231 (339)
T ss_pred HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEcCCcchHHHHHHHhCCCC
Confidence 9997665 48899999999999999999999999997 99999999998888 789999999876543 222332 47
Q ss_pred ccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCCc-eee----------eechHhHHHHHHHHHhCCCcc--ce
Q 019199 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPA-SLN----------IGGTKDTQEMLEYCAAHKIYP--QI 311 (344)
Q Consensus 245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~g~~~~--~~ 311 (344)
+|++||++|+...+..++++++++|+++.+|......+... .+. ....++++++++++.+|++++ .+
T Consensus 232 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i 311 (339)
T cd08239 232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLV 311 (339)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeE
Confidence 99999999998767899999999999999997632222211 111 223478999999999999864 34
Q ss_pred -EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 312 -ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 312 -~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++|+++++++||+.+.+++ .||+||++
T Consensus 312 ~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 312 THRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred EEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 8999999999999998875 79999864
No 14
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=5.4e-47 Score=353.89 Aligned_cols=331 Identities=23% Similarity=0.384 Sum_probs=269.0
Q ss_pred cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC
Q 019199 6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR 84 (344)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~ 84 (344)
.++.++++.+.++++.+.+++++.|+|.++||+||+.++|+|++|++.+.|... ...+|.++|||++|+|+++|+++++
T Consensus 7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 86 (381)
T PLN02740 7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVED 86 (381)
T ss_pred cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCc
Confidence 345677777766555688899999999999999999999999999999888653 3357899999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCCccccc-ccccc-CCC---------------CccCCcceeEEEEecceEE
Q 019199 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAID-ADG---------------TITKGGYSSYIVVHERYCY 147 (344)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~-~~~---------------~~~~g~~~~~~~~~~~~~~ 147 (344)
|++||+|++.+.. +|++|.+|..|..+.|++.... +.... .+| ....|+|+||++++++.++
T Consensus 87 ~~vGdrV~~~~~~-~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 87 LKAGDHVIPIFNG-ECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred CCCCCEEEecCCC-CCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 9999999887654 8999999999999999885321 10000 000 0125899999999999999
Q ss_pred EcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC
Q 019199 148 KIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA 226 (344)
Q Consensus 148 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~ 226 (344)
++|+++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga 244 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGI 244 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCC
Confidence 9999999999999999999999988776677999999999999999999999999999 699999999999988 78999
Q ss_pred cEEEeCCCH-----HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-Cc--cccCCc------eee--
Q 019199 227 DKFVVSSDL-----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SK--VKFSPA------SLN-- 288 (344)
Q Consensus 227 ~~~v~~~~~-----~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~~--~~~~~~------~~~-- 288 (344)
+.+++..+. +.+.+.. +++|++||++|++..+..++++++++ |+++.+|.. .. ..++.. .+.
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~ 324 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGS 324 (381)
T ss_pred cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEE
Confidence 998887642 2233333 47999999999877799999999996 999999976 21 222221 111
Q ss_pred -eec---hHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 289 -IGG---TKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 289 -~~~---~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
.+. ..++.++++++.++.+++ .+ ++|+++|+++|++.+.+++. .|++|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 325 VFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred ecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 111 357889999999999865 34 89999999999999988875 5999874
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.5e-46 Score=350.13 Aligned_cols=327 Identities=21% Similarity=0.318 Sum_probs=265.4
Q ss_pred cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
..+++++.+++.+.++++++++|+|+++||+|||.++|+|++|++.+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 456677776666678899999999999999999999999999998887642 45789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCcccccccccc---------CCC-----CccCCcceeEEEEecceEEEcCCCC
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID---------ADG-----TITKGGYSSYIVVHERYCYKIANDY 153 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~---------~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~ 153 (344)
||+|+..+.. .|++|.+|++|.++.|++......+.. ..| ....|+|+||+.+++..++++|+++
T Consensus 88 GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFTG-ECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecCC-CCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 9999887654 799999999999999987422111100 000 0124899999999999999999999
Q ss_pred CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS 232 (344)
Q Consensus 154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~ 232 (344)
++++++++++++.++|+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|++++.++++.+.+ +++|++++++.
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa~~~i~~ 245 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGVTDFINP 245 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcEEEcc
Confidence 9999999999989999877666667999999999999999999999999999 577788788888888 78999999987
Q ss_pred CCH--H---HHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-CccccCCc-eee------ee-------
Q 019199 233 SDL--E---QMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SKVKFSPA-SLN------IG------- 290 (344)
Q Consensus 233 ~~~--~---~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~~~~~~~~-~~~------~~------- 290 (344)
++. + .+.+.+ +++|++||++|....+..+++.++++ |+++.+|.. ....+... .+. .+
T Consensus 246 ~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
T PLN02827 246 NDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWK 325 (378)
T ss_pred cccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCc
Confidence 642 2 223333 47999999999876699999999998 999999976 22222211 111 11
Q ss_pred chHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199 291 GTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDIQ 340 (344)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 340 (344)
...+++++++++++|++++ .+ ++|+++|+.+|++.+.+++. +|+||+++
T Consensus 326 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 326 PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 2357889999999999987 44 89999999999999998876 69999875
No 16
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=4.5e-47 Score=344.27 Aligned_cols=298 Identities=27% Similarity=0.402 Sum_probs=248.3
Q ss_pred cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCC-CCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIVGIVKEVGHNVSRFK 86 (344)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 86 (344)
|++..+..++.+..+++++++.|.|++|||||||.++|+|+.|...++|. .+..++|.++|.|++|+|+++|+.++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 34555555556666999999999999999999999999999999999987 33556899999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166 (344)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ 166 (344)
+||+|+.... . ...|+|+||+.+|++.++++|+++++++||++++++.
T Consensus 81 ~GdrV~~~~~-----~---------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~ 128 (326)
T COG0604 81 VGDRVAALGG-----V---------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL 128 (326)
T ss_pred CCCEEEEccC-----C---------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence 9999975320 0 0459999999999999999999999999999999999
Q ss_pred HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hhc
Q 019199 167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---ALG 242 (344)
Q Consensus 167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~ 242 (344)
|||+++.....+++|++|||+|+ |++|.+++|+||++|+++++++.++++.+.+ +++|+++++++++.++.+ +++
T Consensus 129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~-~~lGAd~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELL-KELGADHVINYREEDFVEQVRELT 207 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH-HhcCCCEEEcCCcccHHHHHHHHc
Confidence 99999999888899999999986 9999999999999998888888888888755 899999999988765433 344
Q ss_pred --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCceee-----------eec-----hHhHHHHHHH
Q 019199 243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASLN-----------IGG-----TKDTQEMLEY 301 (344)
Q Consensus 243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~-----------~~~-----~~~~~~~~~~ 301 (344)
+++|+|||++|+.. +...+++|+++|+++.+|... ...++...+. ... .+.++++.++
T Consensus 208 ~g~gvDvv~D~vG~~~-~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 286 (326)
T COG0604 208 GGKGVDVVLDTVGGDT-FAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDL 286 (326)
T ss_pred CCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHH
Confidence 47999999999987 999999999999999999863 1112212111 222 3578889999
Q ss_pred HHhCCCccce-EEEeCccHHHHHHHHHc-CCcceEEEEEe
Q 019199 302 CAAHKIYPQI-ETIPIENVNEALERLIK-RDVKYRFVIDI 339 (344)
Q Consensus 302 ~~~g~~~~~~-~~~~~~~~~~a~~~~~~-~~~~gkvvi~~ 339 (344)
+++|.+++.+ .+||++|..++...... ++..||+|+.+
T Consensus 287 ~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 287 LASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 9999999998 69999996555554444 48889999874
No 17
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.1e-46 Score=349.31 Aligned_cols=324 Identities=24% Similarity=0.387 Sum_probs=263.7
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
++++..+..+++++++++.|+|+++||+||+.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++||+
T Consensus 3 ka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gdr 81 (358)
T TIGR03451 3 RGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPGDY 81 (358)
T ss_pred EEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCCCE
Confidence 3444444445688999999999999999999999999999998887654 357889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCcccccccccc-CCC-----CccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID-ADG-----TITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA 164 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~-~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~ 164 (344)
|++.+. ..|+.|.+|..|..++|........... .+| ....|+|+||+.+++..++++|+++++++++.+++.
T Consensus 82 V~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~ 160 (358)
T TIGR03451 82 VVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCG 160 (358)
T ss_pred EEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhccc
Confidence 987665 4799999999999999986321110000 001 012589999999999999999999999999999999
Q ss_pred hhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHH
Q 019199 165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKA 240 (344)
Q Consensus 165 ~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~ 240 (344)
+.|+|+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++.+++..+.+. +.+
T Consensus 161 ~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~i~~ 239 (358)
T TIGR03451 161 VMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGATHTVNSSGTDPVEAIRA 239 (358)
T ss_pred chhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEEcCCCcCHHHHHHH
Confidence 99999888777777999999999999999999999999999 599999999999888 7899999998765433 333
Q ss_pred hc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Cc--cccCCceee---------e----echHhHHHHHHHH
Q 019199 241 LG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK--VKFSPASLN---------I----GGTKDTQEMLEYC 302 (344)
Q Consensus 241 ~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~--~~~~~~~~~---------~----~~~~~~~~~~~~~ 302 (344)
.+ +++|++||++|++.++..++++++++|+++.+|.. .. .+++...+. + ...+.++++++++
T Consensus 240 ~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 319 (358)
T TIGR03451 240 LTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLY 319 (358)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHH
Confidence 33 47999999999877799999999999999999976 22 233321111 1 1246789999999
Q ss_pred HhCCCcc--c-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 303 AAHKIYP--Q-IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 303 ~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
++|++++ . .++|+++|+++|++.+.+++.. |++|.
T Consensus 320 ~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 320 LQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 9999975 3 4899999999999999888765 77765
No 18
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.1e-46 Score=348.55 Aligned_cols=326 Identities=25% Similarity=0.378 Sum_probs=265.1
Q ss_pred eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199 10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89 (344)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd 89 (344)
++++.....++++++++++.|+|.++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 3 ~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGd 82 (368)
T cd08300 3 CKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGD 82 (368)
T ss_pred ceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCCC
Confidence 34455445567789999999999999999999999999999999888765556789999999999999999999999999
Q ss_pred EEEEeccccCCCCCccccCCCCCCCCccccc-cccccC--------CC-----CccCCcceeEEEEecceEEEcCCCCCc
Q 019199 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDA--------DG-----TITKGGYSSYIVVHERYCYKIANDYPL 155 (344)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~--------~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~~ 155 (344)
+|+..+. .+|++|.+|++|+++.|++.... +.+... +| ....|+|+||+.++++.++++|+++++
T Consensus 83 rV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~ 161 (368)
T cd08300 83 HVIPLYT-PECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPL 161 (368)
T ss_pred EEEEcCC-CCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCCh
Confidence 9987644 58999999999999999874211 001000 00 012479999999999999999999999
Q ss_pred ccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199 156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD 234 (344)
Q Consensus 156 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 234 (344)
.+++.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++.+
T Consensus 162 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~~i~~~~ 240 (368)
T cd08300 162 DKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCEEEcccc
Confidence 99999999999999988776677999999999999999999999999999 799999999999888 7899999998765
Q ss_pred H--HH---HHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-Cc--cccCCceee------------eech
Q 019199 235 L--EQ---MKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SK--VKFSPASLN------------IGGT 292 (344)
Q Consensus 235 ~--~~---~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~~--~~~~~~~~~------------~~~~ 292 (344)
. +. +.+.+ +++|++||++|+...+..++++++++ |+++.+|.. .. ..+....+. +...
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 3 12 22333 57999999999876799999999886 999999875 21 222221110 1234
Q ss_pred HhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 293 KDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 293 ~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
++++++++++.++++++ .+ ++|+|+|+++||+.+.+++. .|++++
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 67899999999999975 34 89999999999999988764 588874
No 19
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.4e-46 Score=347.41 Aligned_cols=327 Identities=23% Similarity=0.365 Sum_probs=265.6
Q ss_pred ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (344)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G 88 (344)
++++++....++.+++++++.|+|+++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence 34455555556678999999999999999999999999999999988876556778999999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCCCCCcccccc-cccc---------CCC-----CccCCcceeEEEEecceEEEcCCCC
Q 019199 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAID---------ADG-----TITKGGYSSYIVVHERYCYKIANDY 153 (344)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~-~~~~---------~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~ 153 (344)
|+|++.+. ..|++|.+|.+|.++.|.+..... .+.. ..| ....|+|+||+++++..++++|+++
T Consensus 82 drV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 82 DHVLPVFT-GECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CEEEEccC-CCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99987654 489999999999999998753210 0000 000 0134889999999999999999999
Q ss_pred CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS 232 (344)
Q Consensus 154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~ 232 (344)
++++++.+++.+.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.+ +++|++.+++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~~i~~ 239 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFVNP 239 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEEcc
Confidence 9999999999999999988776777999999999999999999999999999 899999999999888 78999988887
Q ss_pred CC--HH---HHHHh-cCCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCCC---ccccCCceee-----e-------e
Q 019199 233 SD--LE---QMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPS---KVKFSPASLN-----I-------G 290 (344)
Q Consensus 233 ~~--~~---~~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~~~~~~-----~-------~ 290 (344)
.+ .. .+.+. .+++|++||++|....+..++++++++ |+++.+|... ..+++...+. . .
T Consensus 240 ~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 319 (369)
T cd08301 240 KDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYK 319 (369)
T ss_pred cccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCC
Confidence 64 22 22333 357999999999877789999999996 9999999762 2223222111 1 1
Q ss_pred chHhHHHHHHHHHhCCCcc--c-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 291 GTKDTQEMLEYCAAHKIYP--Q-IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
.+++++++++++.++.++. . .++|+++|+++|++.+.+++. .|+++.
T Consensus 320 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~~ 369 (369)
T cd08301 320 PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCILH 369 (369)
T ss_pred hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEeC
Confidence 2357889999999998864 3 489999999999999999885 488873
No 20
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=5e-46 Score=345.63 Aligned_cols=326 Identities=25% Similarity=0.420 Sum_probs=266.4
Q ss_pred cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
++.++++.++.++.+++++++.|.++++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 3556676665666789999999999999999999999999999999888654 467899999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCC-------------CccCCcceeEEEEecceEEEcCCCCC
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADG-------------TITKGGYSSYIVVHERYCYKIANDYP 154 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~P~~~~ 154 (344)
||+|+..+. .+|++|.+|.+|.++.|++..+...+...++ ....|+|+||+.++++.++++|++++
T Consensus 80 GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 80 GDKVIPLFI-GQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCEEEECCC-CCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 999987554 4899999999999999998654322222211 01248999999999999999999999
Q ss_pred cccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC
Q 019199 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS 233 (344)
Q Consensus 155 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~ 233 (344)
+.+++.+++++.|||+++.....+++|++|||+|+|++|++++++|+.+|+ +|+++++++++++.+ +++|++++++..
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~~i~~~ 237 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGATDFINPK 237 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCcEeccc
Confidence 999999999999999988776777999999999999999999999999999 799999999999888 789999988875
Q ss_pred CH-----HHHHHh-cCCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCCC--ccccCCceee---------ee---ch
Q 019199 234 DL-----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPS--KVKFSPASLN---------IG---GT 292 (344)
Q Consensus 234 ~~-----~~~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~--~~~~~~~~~~---------~~---~~ 292 (344)
+. +.+.+. .+++|++||++|+...+..++++++++ |+++.+|... ...++...+. .+ ..
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 317 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGGFKSR 317 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCCCChH
Confidence 42 223333 367999999999877789999999885 9999998752 2222221111 11 13
Q ss_pred HhHHHHHHHHHhCCCc--cce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 293 KDTQEMLEYCAAHKIY--PQI-ETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 293 ~~~~~~~~~~~~g~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
.++++++++++++.++ +.+ ++|+++|+++|++.+.+++ ..|+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 318 SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 5789999999999775 344 8999999999999998887 468886
No 21
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.9e-45 Score=336.69 Aligned_cols=319 Identities=27% Similarity=0.396 Sum_probs=251.1
Q ss_pred ecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCC-CcccccceEEEEecCCCCCCCCCCEEEE
Q 019199 15 ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPL-VPGHEIVGIVKEVGHNVSRFKVGDHVGV 93 (344)
Q Consensus 15 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~~G~~~~~~~~Gd~V~~ 93 (344)
.+.+++..++++.+.|.+.+++|+|||.++|||++|++.+++..+....|. ++|||++|+|+++| .++.+++||||++
T Consensus 6 ~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv 84 (350)
T COG1063 6 VYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVV 84 (350)
T ss_pred EEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEE
Confidence 333444444666666778999999999999999999999999876566666 99999999999999 7778999999998
Q ss_pred eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce-EEEcCCCCCcccccccchhhhHhHHHH
Q 019199 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY-CYKIANDYPLALAAPLLCAGITVYTPM 172 (344)
Q Consensus 94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~P~~~~~~~aa~l~~~~~ta~~~l 172 (344)
.+.. .|+.|.+|+.|.++.|++.. +.+....+...+|+|+||+.+|.+. +.++|+++ +.+++++..++.+++++.
T Consensus 85 ~~~~-~Cg~C~~C~~G~~~~C~~~~--~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~ 160 (350)
T COG1063 85 EPNI-PCGHCRYCRAGEYNLCENPG--FYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGH 160 (350)
T ss_pred CCCc-CCCCChhHhCcCcccCCCcc--ccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhh
Confidence 8765 89999999999999999542 1111111112679999999999755 55568998 777777888999997774
Q ss_pred HhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH---HHHHhc--CCcc
Q 019199 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKALG--KSLD 246 (344)
Q Consensus 173 ~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~~~~~--~~~d 246 (344)
......+++++|+|+|+|++|++++++++.+|+ +|++++.+++|++.+++.+|++.+++....+ ...+.+ .++|
T Consensus 161 a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D 240 (350)
T COG1063 161 AERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGAD 240 (350)
T ss_pred hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCC
Confidence 334433666699999999999999999999998 8899999999999995447788777665432 223343 4699
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCC-Ccc-ccCCceee------ee-----chHhHHHHHHHHHhCCCccc---
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKV-KFSPASLN------IG-----GTKDTQEMLEYCAAHKIYPQ--- 310 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~-~~~~~~~~------~~-----~~~~~~~~~~~~~~g~~~~~--- 310 (344)
++|||+|...++.++++.++++|+++.+|.. ... .++...+. .+ ...+++.+++++++|++++.
T Consensus 241 ~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~li 320 (350)
T COG1063 241 VVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLI 320 (350)
T ss_pred EEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHce
Confidence 9999999988899999999999999999988 332 33332222 22 23579999999999999864
Q ss_pred eEEEeCccHHHHHHHHHcCCc-ceEEEEE
Q 019199 311 IETIPIENVNEALERLIKRDV-KYRFVID 338 (344)
Q Consensus 311 ~~~~~~~~~~~a~~~~~~~~~-~gkvvi~ 338 (344)
.++++++++++|++.+.+.+. .-|+++.
T Consensus 321 t~~~~~~~~~~a~~~~~~~~~~~~Kv~i~ 349 (350)
T COG1063 321 THRLPLDDAAEAYELFADRKEEAIKVVLK 349 (350)
T ss_pred EeeccHHHHHHHHHHHHhcCCCeEEEEec
Confidence 488999999999999998654 4688875
No 22
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.2e-45 Score=306.18 Aligned_cols=301 Identities=22% Similarity=0.320 Sum_probs=264.9
Q ss_pred cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199 6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF 85 (344)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~ 85 (344)
.+.+.+.....++.+.+++++.|.|+|+++|.+||..|+|+|..|..+++|.+...+.|.++|-|.+|+|+++|+.++++
T Consensus 7 ~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdr 86 (336)
T KOG1197|consen 7 PLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDR 86 (336)
T ss_pred chheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcccc
Confidence 45566666667788999999999999999999999999999999999999998777889999999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (344)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~ 165 (344)
++||||+.. ...|.|+++.++|...++++|+.+++.+||++...+
T Consensus 87 kvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~ 131 (336)
T KOG1197|consen 87 KVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQG 131 (336)
T ss_pred ccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHH
Confidence 999999753 356899999999999999999999999999999999
Q ss_pred hHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---
Q 019199 166 ITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL--- 241 (344)
Q Consensus 166 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~--- 241 (344)
.|||.-+.+...+++|++||++.+ |++|+++.|++++.|++++.+.+..++.+.+ ++.|+++.|+++.++..++.
T Consensus 132 lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~a-kenG~~h~I~y~~eD~v~~V~ki 210 (336)
T KOG1197|consen 132 LTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIA-KENGAEHPIDYSTEDYVDEVKKI 210 (336)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHH-HhcCCcceeeccchhHHHHHHhc
Confidence 999999999999999999999975 9999999999999999999999999999888 79999999999998877665
Q ss_pred --cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC----CccccCCceee------------eechH----hHHHHH
Q 019199 242 --GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP----SKVKFSPASLN------------IGGTK----DTQEML 299 (344)
Q Consensus 242 --~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~----~~~~~~~~~~~------------~~~~~----~~~~~~ 299 (344)
++|+|+++|.+|... +...+.+|++.|+++.+|.. ...+++.++.. ...+. -..+++
T Consensus 211 TngKGVd~vyDsvG~dt-~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~ 289 (336)
T KOG1197|consen 211 TNGKGVDAVYDSVGKDT-FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLF 289 (336)
T ss_pred cCCCCceeeeccccchh-hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHH
Confidence 379999999999876 99999999999999999976 22222222111 11122 346677
Q ss_pred HHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199 300 EYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343 (344)
Q Consensus 300 ~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 343 (344)
.++.+|.+++.+ ++||++++.+|+.++++++..||+++...++.
T Consensus 290 alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~ 334 (336)
T KOG1197|consen 290 ALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEK 334 (336)
T ss_pred HHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCccc
Confidence 888899999988 89999999999999999999999999988764
No 23
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.8e-45 Score=337.83 Aligned_cols=313 Identities=25% Similarity=0.415 Sum_probs=258.1
Q ss_pred ecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCC-CCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEE
Q 019199 15 ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93 (344)
Q Consensus 15 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~ 93 (344)
+.++.+.+++++.|.|+|.++||+||+.++|+|++|++.+.+. .....+|.++|||++|+|+++|+.++.+ +||+|++
T Consensus 4 ~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~ 82 (349)
T TIGR03201 4 MTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIV 82 (349)
T ss_pred EecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEE
Confidence 3333344888999999999999999999999999999876433 2234568899999999999999999887 9999987
Q ss_pred eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCC------CCCcccccccchhhhH
Q 019199 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN------DYPLALAAPLLCAGIT 167 (344)
Q Consensus 94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~------~~~~~~aa~l~~~~~t 167 (344)
.+.. +|++|.+|+.|+++.|+..... |....|+|+||+.++++.++++|+ ++++++++++++.+.|
T Consensus 83 ~~~~-~cg~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~t 154 (349)
T TIGR03201 83 PAVI-PCGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTT 154 (349)
T ss_pred CCCC-CCCCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHH
Confidence 6654 8999999999999999864321 222358999999999999999999 8999999999999999
Q ss_pred hHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH---HH---HHHh
Q 019199 168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL---EQ---MKAL 241 (344)
Q Consensus 168 a~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~~---~~~~ 241 (344)
+|+++... .+++|++|+|+|+|++|++++++|+.+|++|+++++++++++.+ +++|++++++..+. +. +.+.
T Consensus 155 a~~a~~~~-~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~ 232 (349)
T TIGR03201 155 PYQAAVQA-GLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGADLTLNPKDKSAREVKKLIKAF 232 (349)
T ss_pred HHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceEecCccccHHHHHHHHHhh
Confidence 99998764 45999999999999999999999999999999999999999888 78999998887553 22 2233
Q ss_pred c--CCcc----EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee------e----echHhHHHHHHHHHh
Q 019199 242 G--KSLD----FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN------I----GGTKDTQEMLEYCAA 304 (344)
Q Consensus 242 ~--~~~d----vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~------~----~~~~~~~~~~~~~~~ 304 (344)
+ +++| ++||++|+...+..++++++++|+++.+|.. ....++...+. . ...++++++++++.+
T Consensus 233 t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~ 312 (349)
T TIGR03201 233 AKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLD 312 (349)
T ss_pred cccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHc
Confidence 3 4665 8999999987788999999999999999976 22233222211 1 134689999999999
Q ss_pred CCCcc--ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 305 HKIYP--QIETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 305 g~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
|++++ .+++|+++|+++||+.+.+++..||++++
T Consensus 313 g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 313 GKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred CCCCcccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence 99965 45789999999999999999988999885
No 24
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.4e-44 Score=337.56 Aligned_cols=321 Identities=21% Similarity=0.281 Sum_probs=247.1
Q ss_pred eeeecCCCCCccceeeccCCCC-------CCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC
Q 019199 12 GWAARDPSGVLSPYSFNRRAVG-------SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR 84 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~ 84 (344)
++++. .++.+++++++.|+|+ +|||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|+++++
T Consensus 5 a~v~~-~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V~~ 82 (393)
T TIGR02819 5 GVVYL-GPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDVEF 82 (393)
T ss_pred EEEEe-cCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcccc
Confidence 44443 4557889999999874 68999999999999999999887643 356899999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCCccccc----cccccCCCCccCCcceeEEEEecc--eEEEcCCCCCc---
Q 019199 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT----FNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPL--- 155 (344)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~--- 155 (344)
|++||||++.+.. .|++|.+|++|+++.|.+.... +.+....+ ...|+|+||+.+|+. .++++|++++.
T Consensus 83 ~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~ 160 (393)
T TIGR02819 83 IKIGDIVSVPFNI-ACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-GWVGGQSEYVMVPYADFNLLKFPDRDQALEK 160 (393)
T ss_pred ccCCCEEEEeccc-CCCCChHHHCcCcccCcCCCCCCccceecccccC-CCCCceEEEEEechhhCceEECCCccccccc
Confidence 9999999887654 7999999999999999974211 11110001 135999999999964 69999998754
Q ss_pred -ccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEE-EEeCCchhHHHHHHhCCCcEEEeCC
Q 019199 156 -ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT-VLSTSTSKKEEALSLLGADKFVVSS 233 (344)
Q Consensus 156 -~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~ 233 (344)
.+++++.+.+.++|+++.. ..+++|++|||.|+|++|++++|+|+.+|++++ +++.+++|++.+ +++|++. ++..
T Consensus 161 ~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~Ga~~-v~~~ 237 (393)
T TIGR02819 161 IRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSFGCET-VDLS 237 (393)
T ss_pred ccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHcCCeE-EecC
Confidence 3567888889999999875 455999999999899999999999999999654 455667788888 7899975 4442
Q ss_pred -CH---HHHHHhc--CCccEEEECCCCc--------------hhHHHHHHhcccCCEEEEEcCC-C-cc-ccC------C
Q 019199 234 -DL---EQMKALG--KSLDFIIDTASGD--------------HPFDAYMSLLKVAGVYVLVGFP-S-KV-KFS------P 284 (344)
Q Consensus 234 -~~---~~~~~~~--~~~dvvid~~g~~--------------~~~~~~~~~l~~~G~iv~~g~~-~-~~-~~~------~ 284 (344)
+. +.+.+.+ +++|++||++|.+ .+++++++.++++|+++.+|.. . .. .+. .
T Consensus 238 ~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~ 317 (393)
T TIGR02819 238 KDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGS 317 (393)
T ss_pred CcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccc
Confidence 22 2233333 4799999999986 3699999999999999999975 1 11 111 0
Q ss_pred ceee-----------eec--h--HhHHHHHHHHHhCCCcc---ce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199 285 ASLN-----------IGG--T--KDTQEMLEYCAAHKIYP---QI-ETIPIENVNEALERLIKRDVKYRFVIDIQ 340 (344)
Q Consensus 285 ~~~~-----------~~~--~--~~~~~~~~~~~~g~~~~---~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 340 (344)
.++. .+. . +.+.++++++.+|++++ .+ ++|+++|+++||+.+.+++ .+|++|.++
T Consensus 318 ~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 318 LSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA-AKKFVIDPH 391 (393)
T ss_pred cccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC-ceEEEEeCC
Confidence 0111 000 1 23367999999999975 34 6899999999999998875 489999864
No 25
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.2e-44 Score=335.26 Aligned_cols=306 Identities=24% Similarity=0.276 Sum_probs=239.4
Q ss_pred ccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199 22 LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (344)
Q Consensus 22 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~ 98 (344)
++++++|.|+|+++||||||.|+|+|++|++.+.|..+ ...+|.++|||++|+|+++|++ ++|++||+|+..+. .
T Consensus 13 l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~-~ 90 (355)
T cd08230 13 VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVR-R 90 (355)
T ss_pred CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccc-c
Confidence 88999999999999999999999999999999988653 1245789999999999999999 99999999987654 4
Q ss_pred CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc---
Q 019199 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH--- 175 (344)
Q Consensus 99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~--- 175 (344)
.|++|.+|++|+++.|.+..+...+. ....|+|+||+.++++.++++|++++ +++++..++.+++.++...
T Consensus 91 ~cg~C~~c~~g~~~~c~~~~~~~~g~----~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~~~~ 164 (355)
T cd08230 91 PPGKCLNCRIGRPDFCETGEYTERGI----KGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEAV 164 (355)
T ss_pred CCCcChhhhCcCcccCCCcceeccCc----CCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHHhhh
Confidence 79999999999999998754321121 02468999999999999999999999 3344444555544443221
Q ss_pred ---cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeC---CchhHHHHHHhCCCcEEEeCCCHHHH-HHhcCCccEE
Q 019199 176 ---KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST---STSKKEEALSLLGADKFVVSSDLEQM-KALGKSLDFI 248 (344)
Q Consensus 176 ---~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~---~~~~~~~~~~~~g~~~~v~~~~~~~~-~~~~~~~dvv 248 (344)
...++|++|+|+|+|++|++++|+||.+|++|+++++ ++++++.+ +++|++. +++.+.+.. .+..+++|++
T Consensus 165 ~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~-~~~Ga~~-v~~~~~~~~~~~~~~~~d~v 242 (355)
T cd08230 165 QKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIV-EELGATY-VNSSKTPVAEVKLVGEFDLI 242 (355)
T ss_pred hhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEE-ecCCccchhhhhhcCCCCEE
Confidence 1246899999999999999999999999999999987 56777777 7899987 455443221 1224679999
Q ss_pred EECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCC----ceee----------eechHhHHHHHHHHHhCC-----
Q 019199 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSP----ASLN----------IGGTKDTQEMLEYCAAHK----- 306 (344)
Q Consensus 249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~----~~~~----------~~~~~~~~~~~~~~~~g~----- 306 (344)
||++|++..+..+++.++++|+++.+|.. . ..+++. ..+. ....++++++++++.++.
T Consensus 243 id~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~ 322 (355)
T cd08230 243 IEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPG 322 (355)
T ss_pred EECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHHHHHhccccccc
Confidence 99999877789999999999999999976 3 223331 1111 223467899999998877
Q ss_pred -Cccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 307 -IYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 307 -~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+++.+ ++|+++|+++||+++.++. +|++|.+
T Consensus 323 ~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 323 VLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred chHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 44544 8999999999999887654 5999864
No 26
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.3e-43 Score=325.74 Aligned_cols=319 Identities=33% Similarity=0.603 Sum_probs=269.6
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+++...++.+.+++++++.|++.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+.+++|++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 81 (333)
T cd08296 2 KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDR 81 (333)
T ss_pred eEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCCE
Confidence 45555545467899999999999999999999999999999988886544456889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 170 (344)
|++.+....|+.|.+|..|+.+.|.+.... +....|++++|+.++...++++|+++++.+++++++.+.|||+
T Consensus 82 V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 154 (333)
T cd08296 82 VGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN 154 (333)
T ss_pred EEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence 988766678999999999999999875421 2223589999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh--cCCccEE
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL--GKSLDFI 248 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~dvv 248 (344)
++... .+++|++|||+|+|.+|++++++|+.+|++|+++++++++++.+ +++|++++++....+....+ .+++|++
T Consensus 155 ~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~d~v 232 (333)
T cd08296 155 ALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAHHYIDTSKEDVAEALQELGGAKLI 232 (333)
T ss_pred HHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCcEEecCCCccHHHHHHhcCCCCEE
Confidence 99776 66999999999999999999999999999999999999998888 78999999887654332222 1579999
Q ss_pred EECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCc
Q 019199 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIE 317 (344)
Q Consensus 249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 317 (344)
+|+.|....+..++++++++|+++.+|.. ...+++...+. ....++++.+++++.++++++.++.|+++
T Consensus 233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~ 312 (333)
T cd08296 233 LATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETFPLE 312 (333)
T ss_pred EECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceEEEEEHH
Confidence 99998666799999999999999999876 33333322111 23346788999999999998777889999
Q ss_pred cHHHHHHHHHcCCcceEEEEE
Q 019199 318 NVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvi~ 338 (344)
++.+||+.+.+++.+||+|++
T Consensus 313 ~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 313 KANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHCCCCceeEEeC
Confidence 999999999999999999874
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-43 Score=327.04 Aligned_cols=316 Identities=22% Similarity=0.353 Sum_probs=252.8
Q ss_pred eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
++... .++.+++.+.+.|+| .++||+||+.++++|++|+....... ...+|.++|||++|+|+++|+++++|++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~ 80 (347)
T PRK10309 3 SVVND-TDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPGDA 80 (347)
T ss_pred eEEEe-CCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 44443 345688899999997 59999999999999999987532211 1235789999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 170 (344)
|++.+.. .|+.|.+|..|..+.|.+..+ . +....|+|++|+.++++.++++|+++++++++.+. .+.++++
T Consensus 81 V~~~~~~-~c~~c~~c~~g~~~~c~~~~~--~-----g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~ 151 (347)
T PRK10309 81 VACVPLL-PCFTCPECLRGFYSLCAKYDF--I-----GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH 151 (347)
T ss_pred EEECCCc-CCCCCcchhCcCcccCCCcce--e-----ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence 9887765 799999999999999986432 1 22346899999999999999999999999998663 4555777
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc--CCc
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG--KSL 245 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~--~~~ 245 (344)
++.. ..+++|++|+|+|+|++|++++|+|+.+|++ |+++++++++++.+ +++|++++++.++. +.+.+.. +++
T Consensus 152 ~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~~~ 229 (347)
T PRK10309 152 AFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLGAMQTFNSREMSAPQIQSVLRELRF 229 (347)
T ss_pred HHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCceEecCcccCHHHHHHHhcCCCC
Confidence 7644 4458999999999999999999999999996 78888889888887 78999998887643 2233332 468
Q ss_pred c-EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc----------eee--e-e-----chHhHHHHHHHHHhC
Q 019199 246 D-FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA----------SLN--I-G-----GTKDTQEMLEYCAAH 305 (344)
Q Consensus 246 d-vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~----------~~~--~-~-----~~~~~~~~~~~~~~g 305 (344)
| ++||++|+...+..++++++++|+++.+|.. ....++.. .+. + . ..++++++++++++|
T Consensus 230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g 309 (347)
T PRK10309 230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER 309 (347)
T ss_pred CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcC
Confidence 8 9999999887799999999999999999976 32222211 111 1 1 136789999999999
Q ss_pred CCc--cce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199 306 KIY--PQI-ETIPIENVNEALERLIKRDVKYRFVIDIQ 340 (344)
Q Consensus 306 ~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 340 (344)
.+. +.+ ++|+|+|+++|++.+.+++..||+|+.++
T Consensus 310 ~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 310 KLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred CCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 985 444 88999999999999999988899999763
No 28
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.4e-43 Score=324.45 Aligned_cols=326 Identities=57% Similarity=0.950 Sum_probs=278.8
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
++|.++...+.+++++++.|+|.++||+||+.++++|++|+..+.|......+|.++|||++|+|+++|+.+++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 35677777788999999999999999999999999999999988887655566889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 170 (344)
|++.+....|++|.+|.++..+.|++....+.+...++....|+|++|+.++.+.++++|+++++.+++.+++.+.|||+
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 160 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYS 160 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHH
Confidence 98666667899999999999999988654444444444445789999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid 250 (344)
++.... +++|++++|.|+|.+|++++++++.+|++|+++++++++.+.+ +++|++.+++.+..+......+++|++||
T Consensus 161 ~~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~ 238 (337)
T cd05283 161 PLKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIID 238 (337)
T ss_pred HHHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEecCcchhhhhhccCCceEEEE
Confidence 987776 5999999998889999999999999999999999998888888 68999998887765544445578999999
Q ss_pred CCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccH
Q 019199 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENV 319 (344)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (344)
+++....+..++++++++|+++.+|.. ....++...+. ....++++.+++++.++++++.++.|+++++
T Consensus 239 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (337)
T cd05283 239 TVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGI 318 (337)
T ss_pred CCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHH
Confidence 999875589999999999999999866 22223222211 2345789999999999999887889999999
Q ss_pred HHHHHHHHcCCcceEEEEE
Q 019199 320 NEALERLIKRDVKYRFVID 338 (344)
Q Consensus 320 ~~a~~~~~~~~~~gkvvi~ 338 (344)
++||+.+.+++..||+|++
T Consensus 319 ~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 319 NEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHcCCCcceEeeC
Confidence 9999999999989999874
No 29
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=9.6e-43 Score=323.41 Aligned_cols=325 Identities=25% Similarity=0.349 Sum_probs=263.1
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC------
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR------ 84 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~------ 84 (344)
+++++.+..+.+++++.+.|+|.++||+||+.++++|++|+....|..+...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 45666554568999999999999999999999999999999988886643467889999999999999999986
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc-eEEEcCCCCCcccccccch
Q 019199 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER-YCYKIANDYPLALAAPLLC 163 (344)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~P~~~~~~~aa~l~~ 163 (344)
|++||+|+..+.+ +|+.|.+|+.+.++.|.+..+.-...........|+|++|++++++ .++++|++++..+++.+++
T Consensus 82 ~~~Gd~V~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~ 160 (361)
T cd08231 82 LKVGDRVTWSVGA-PCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC 160 (361)
T ss_pred cCCCCEEEEcccC-CCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcC
Confidence 9999999887655 8999999999999999876432111100011235899999999986 7999999999999998889
Q ss_pred hhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH------
Q 019199 164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE------ 236 (344)
Q Consensus 164 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~------ 236 (344)
++.|||+++......++|++|||+|+|++|++++++|+.+|+ +|+++++++++.+.+ +++|++.+++.++..
T Consensus 161 ~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~ 239 (361)
T cd08231 161 ALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGADATIDIDELPDPQRRA 239 (361)
T ss_pred HHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCCeEEcCcccccHHHHH
Confidence 999999999888886799999999999999999999999999 999999888888877 689999888775421
Q ss_pred HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCCc-------eee---eechHhHHHHHHH
Q 019199 237 QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPA-------SLN---IGGTKDTQEMLEY 301 (344)
Q Consensus 237 ~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~~-------~~~---~~~~~~~~~~~~~ 301 (344)
.+.+.. +++|++||++|+...+..++++++++|+++.+|.. . ...++.. .+. ....+++++++++
T Consensus 240 ~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
T cd08231 240 IVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRF 319 (361)
T ss_pred HHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHH
Confidence 233333 57999999999866689999999999999999865 1 2222221 111 2345678999999
Q ss_pred HHhC--CCc--cc-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 302 CAAH--KIY--PQ-IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 302 ~~~g--~~~--~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+.++ .++ +. .++|+++++++||+.+.+++ .+|+||.
T Consensus 320 ~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 360 (361)
T cd08231 320 LERTQDRFPFAELVTHRYPLEDINEALELAESGT-ALKVVID 360 (361)
T ss_pred HHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceEEEeC
Confidence 9887 433 34 48899999999999998877 4899985
No 30
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.1e-43 Score=324.98 Aligned_cols=308 Identities=15% Similarity=0.172 Sum_probs=232.7
Q ss_pred ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCC----CCCCCCcccccceEEEEecCCCCC
Q 019199 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSR 84 (344)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~~G~~~~~ 84 (344)
+.+++.+. .++.+++++.+.|+ +++||+|||.++|||++|++.+.|.... ..+|.++|||++|+|+++|.. +
T Consensus 2 ~~~~~~~~-~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLV-RPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEe-ccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 34556655 56689999999995 9999999999999999999999886531 357999999999999998864 7
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA 164 (344)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~ 164 (344)
|++||+|++.+.. .|+ |..| +..+.|.+..+. |....|+|+||+++|++.++++|+++++++|+ +..+
T Consensus 78 ~~vGdrV~~~~~~-~~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~ 145 (341)
T cd08237 78 YKVGTKVVMVPNT-PVE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTEL 145 (341)
T ss_pred cCCCCEEEECCCC-Cch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhch
Confidence 9999999887655 476 4455 345678654321 11235899999999999999999999998876 4457
Q ss_pred hhHhHHHHHhcc--CCCCCCEEEEECCChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH
Q 019199 165 GITVYTPMMRHK--MNQPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240 (344)
Q Consensus 165 ~~ta~~~l~~~~--~~~~g~~vlI~Gag~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 240 (344)
+.++++++.... .+++|++|||+|+|++|++++|+++. +|+ +|++++++++|++.+ ++++++..++ +..+
T Consensus 146 ~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a-~~~~~~~~~~----~~~~- 219 (341)
T cd08237 146 VSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLF-SFADETYLID----DIPE- 219 (341)
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH-hhcCceeehh----hhhh-
Confidence 888898886532 34889999999999999999999986 554 899999999998888 4566654321 1111
Q ss_pred hcCCccEEEECCCC---chhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhC-
Q 019199 241 LGKSLDFIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAH- 305 (344)
Q Consensus 241 ~~~~~dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g- 305 (344)
..++|++||++|+ +.++..+++.++++|+++.+|.. ....++...+. ....++++++++++.++
T Consensus 220 -~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08237 220 -DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNP 298 (341)
T ss_pred -ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCC
Confidence 1369999999994 45689999999999999999975 32233322111 22346799999999998
Q ss_pred ----CCccce-EEEeCcc---HHHHHHHHHcCCcceEEEEEeC
Q 019199 306 ----KIYPQI-ETIPIEN---VNEALERLIKRDVKYRFVIDIQ 340 (344)
Q Consensus 306 ----~~~~~~-~~~~~~~---~~~a~~~~~~~~~~gkvvi~~~ 340 (344)
.+++.+ ++|++++ +.++++.+.++ ..||+||+++
T Consensus 299 ~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 299 EVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred cccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 455555 7899864 55555555444 5799999864
No 31
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=5.7e-42 Score=317.03 Aligned_cols=315 Identities=26% Similarity=0.407 Sum_probs=255.4
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC-C----------CCCCCCCcccccceEEEEecC
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-G----------DSKYPLVPGHEIVGIVKEVGH 80 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~----------~~~~p~~~G~e~~G~V~~~G~ 80 (344)
++.+. .++.+++++++.|+|+++||+||+.++++|++|+..+.+.. . ...+|.++|||++|+|+++|+
T Consensus 3 a~~~~-~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 81 (351)
T cd08233 3 AARYH-GRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGS 81 (351)
T ss_pred eEEEe-cCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCC
Confidence 44444 35678899999999999999999999999999987654321 1 113688999999999999999
Q ss_pred CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP 160 (344)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~ 160 (344)
++++|++||+|+..+.. .|++|.+|.+|.+..|....+ .+.. ...|+|++|+.++...++++|++++..+++.
T Consensus 82 ~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~ 154 (351)
T cd08233 82 GVTGFKVGDRVVVEPTI-KCGTCGACKRGLYNLCDSLGF--IGLG----GGGGGFAEYVVVPAYHVHKLPDNVPLEEAAL 154 (351)
T ss_pred CCCCCCCCCEEEECCCC-CCCCChHHhCcCcccCCCCce--eccC----CCCCceeeEEEechHHeEECcCCCCHHHhhh
Confidence 99999999999876554 799999999999999986532 1110 1258999999999999999999999998876
Q ss_pred cchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH-
Q 019199 161 LLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM- 238 (344)
Q Consensus 161 l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~- 238 (344)
+ ..+.|||+++ ....+++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+.+ +++|++.++++++.+..
T Consensus 155 ~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~ 231 (351)
T cd08233 155 V-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATIVLDPTEVDVVA 231 (351)
T ss_pred c-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEECCCccCHHH
Confidence 5 5778999998 45566999999999999999999999999999 899999888888888 67999999987765433
Q ss_pred --HHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHH
Q 019199 239 --KALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCA 303 (344)
Q Consensus 239 --~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 303 (344)
.+.. +++|++||++|....+..++++++++|+++.+|.. ....++...+. ....++++++++++.
T Consensus 232 ~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 311 (351)
T cd08233 232 EVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLA 311 (351)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHH
Confidence 2332 46999999999776699999999999999999876 22232221111 123478999999999
Q ss_pred hCCCcc--ce-EEEeCccH-HHHHHHHHcCCcc-eEEEE
Q 019199 304 AHKIYP--QI-ETIPIENV-NEALERLIKRDVK-YRFVI 337 (344)
Q Consensus 304 ~g~~~~--~~-~~~~~~~~-~~a~~~~~~~~~~-gkvvi 337 (344)
++.+++ .+ ++|+++|+ ++|++.+.+++.. ||+||
T Consensus 312 ~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 312 SGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred cCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 999964 34 79999996 7999999999875 99987
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.7e-41 Score=310.36 Aligned_cols=320 Identities=20% Similarity=0.247 Sum_probs=259.2
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
++.+.+ ++.+++.+.+.|.+.++||+||+.++++|++|++...+......+|.++|||++|+|+++|+.+++|++||+|
T Consensus 3 a~~~~~-~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V 81 (351)
T cd08285 3 AFAMLG-IGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGDRV 81 (351)
T ss_pred eEEEcc-CCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCCEE
Confidence 444443 4457888899999999999999999999999998877765444568899999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHhH
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITVY 169 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta~ 169 (344)
+..+.. .|+.|..|..|+++.|.+.... +.. +....|+|++|+.++.+ .++++|+++++.+++.++..+.||+
T Consensus 82 ~~~~~~-~~~~c~~c~~g~~~~~~~~~~~---~~~-~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~ 156 (351)
T cd08285 82 IVPAIT-PDWRSVAAQRGYPSQSGGMLGG---WKF-SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF 156 (351)
T ss_pred EEcCcC-CCCCCHHHHCcCcccCcCCCCC---ccc-cCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHH
Confidence 887654 7999999999999999874211 111 11246899999999974 8999999999999999999999999
Q ss_pred HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--C
Q 019199 170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--K 243 (344)
Q Consensus 170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~ 243 (344)
+++.. ..+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.+ +++|++++++..+.+. +.+.. +
T Consensus 157 ~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~~~~~~~ 234 (351)
T cd08285 157 HGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELA-KEYGATDIVDYKNGDVVEQILKLTGGK 234 (351)
T ss_pred HHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCceEecCCCCCHHHHHHHHhCCC
Confidence 99754 456999999999889999999999999999 588888888888777 6899999988765432 22222 5
Q ss_pred CccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCC--c-------eee--e--echHhHHHHHHHHHhCCC
Q 019199 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSP--A-------SLN--I--GGTKDTQEMLEYCAAHKI 307 (344)
Q Consensus 244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~--~-------~~~--~--~~~~~~~~~~~~~~~g~~ 307 (344)
++|+++|++|+...+..++++++++|+++.+|... ...++. + .+. . ...+.++++++++++|++
T Consensus 235 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i 314 (351)
T cd08285 235 GVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRV 314 (351)
T ss_pred CCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCC
Confidence 79999999998766899999999999999998662 122221 1 111 1 234678999999999999
Q ss_pred cc---ce-EEEeCccHHHHHHHHHcCCc-ceEEEEEe
Q 019199 308 YP---QI-ETIPIENVNEALERLIKRDV-KYRFVIDI 339 (344)
Q Consensus 308 ~~---~~-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 339 (344)
++ .+ +.|+++++++|++.+.+++. ..|++|.+
T Consensus 315 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 315 DPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred ChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 87 34 46899999999999999874 68999864
No 33
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2.2e-41 Score=307.27 Aligned_cols=288 Identities=19% Similarity=0.185 Sum_probs=224.0
Q ss_pred eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecc-cchhhhhcCCCCC---CCCCCCcccccceEEEEecCCCCCC
Q 019199 10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVC-YADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRF 85 (344)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~~~~~ 85 (344)
++++.+. +++.+++++.+.|+|+++||+||+.++|+| ++|++.+.|..+. ..+|.++|||++|+|+++|+++ +|
T Consensus 2 ~ka~~~~-~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~ 79 (308)
T TIGR01202 2 TQAIVLS-GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF 79 (308)
T ss_pred ceEEEEe-CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence 4556654 466789999999999999999999999996 7999888886542 3579999999999999999998 69
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (344)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~ 165 (344)
++||+|++. |..|..|.. ...|+|+||+.++++.++++|+++++.. +.+ ...
T Consensus 80 ~vGdrV~~~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~ 131 (308)
T TIGR01202 80 RPGDRVFVP-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALA 131 (308)
T ss_pred CCCCEEEEe-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHH
Confidence 999999762 223322211 1248999999999999999999999854 444 457
Q ss_pred hHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCC
Q 019199 166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKS 244 (344)
Q Consensus 166 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~ 244 (344)
.|||+++.+. . .++++|+|+|+|++|++++|+|+.+|++ |++++..+++++.+ +. ..++++.+. ...+
T Consensus 132 ~~a~~~~~~~-~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a-~~---~~~i~~~~~-----~~~g 200 (308)
T TIGR01202 132 ATARHAVAGA-E-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGA-TG---YEVLDPEKD-----PRRD 200 (308)
T ss_pred HHHHHHHHhc-c-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhh-hh---ccccChhhc-----cCCC
Confidence 8999998764 3 4688999999999999999999999996 55666666666555 23 334544321 2357
Q ss_pred ccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCcc--c-
Q 019199 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYP--Q- 310 (344)
Q Consensus 245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~--~- 310 (344)
+|++||++|+..+++.++++++++|+++.+|.. ....++..... ....++++++++++.+|++++ .
T Consensus 201 ~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~i 280 (308)
T TIGR01202 201 YRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLI 280 (308)
T ss_pred CCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhcc
Confidence 999999999987789999999999999999976 32233222111 123467999999999999975 3
Q ss_pred eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 311 IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
.++|+++|+++|++.+.+++..+|++|+
T Consensus 281 t~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 281 THQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 4899999999999998887767999874
No 34
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.6e-40 Score=309.41 Aligned_cols=327 Identities=25% Similarity=0.388 Sum_probs=259.5
Q ss_pred ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (344)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G 88 (344)
++++++...+++.++++++|.|++.++||+||+.++|+|++|++.+.|... ..+|.++|||++|+|+++|++++.+++|
T Consensus 7 ~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~G 85 (373)
T cd08299 7 KCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPG 85 (373)
T ss_pred eeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCCC
Confidence 355666666677789999999999999999999999999999998887653 3568899999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCCCCCcccccc-cccc--------CCC-----CccCCcceeEEEEecceEEEcCCCCC
Q 019199 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAID--------ADG-----TITKGGYSSYIVVHERYCYKIANDYP 154 (344)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~-~~~~--------~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~ 154 (344)
|+|++.+ ..+|++|.+|+.++++.|++....- .++. ..| ....|+|+||+.++++.++++|++++
T Consensus 86 d~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~ 164 (373)
T cd08299 86 DKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP 164 (373)
T ss_pred CEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence 9998765 4589999999999999998753210 0000 001 01258999999999999999999999
Q ss_pred cccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC
Q 019199 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS 233 (344)
Q Consensus 155 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~ 233 (344)
+.+++.+++++.|||+++.....+++|++|+|+|+|++|++++++|+.+|+ +|+++++++++++.+ +++|++++++..
T Consensus 165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~~~i~~~ 243 (373)
T cd08299 165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGATECINPQ 243 (373)
T ss_pred hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEeccc
Confidence 999999999999999988777777999999999889999999999999999 899999999999888 789999988865
Q ss_pred CH-----HHHHHh-cCCccEEEECCCCchhHHHHHHhc-ccCCEEEEEcCC-C--ccccCCc------eee---e---ec
Q 019199 234 DL-----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLL-KVAGVYVLVGFP-S--KVKFSPA------SLN---I---GG 291 (344)
Q Consensus 234 ~~-----~~~~~~-~~~~dvvid~~g~~~~~~~~~~~l-~~~G~iv~~g~~-~--~~~~~~~------~~~---~---~~ 291 (344)
+. ..+.+. .+++|+++|++|++..+..++..+ +++|+++.+|.. . ...+... .+. . ..
T Consensus 244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
T cd08299 244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS 323 (373)
T ss_pred ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCcc
Confidence 42 122222 357999999999876678877765 579999999965 2 1222221 111 1 12
Q ss_pred hHhHHHHHHHHHhCCCc--cc-eEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 292 TKDTQEMLEYCAAHKIY--PQ-IETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 292 ~~~~~~~~~~~~~g~~~--~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
.+.+.++++.+.++.++ +. .++|+++++.+|++.+.+++. .|+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 25677788888777654 33 489999999999999887664 5887753
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.4e-40 Score=304.72 Aligned_cols=318 Identities=21% Similarity=0.299 Sum_probs=254.8
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
++... +++.+++++++.|+|.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+.++.+++||+|
T Consensus 3 a~~~~-~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 81 (339)
T PRK10083 3 SIVIE-KPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERV 81 (339)
T ss_pred EEEEe-cCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCCEE
Confidence 44443 45678899999999999999999999999999999888766544678999999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~ 171 (344)
++.+.. .|+.|.+|.+++++.|..... . +....|+|++|+.++...++++|+++++.+++ +...+.+++.+
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~ 152 (339)
T PRK10083 82 AVDPVI-SCGHCYPCSIGKPNVCTSLVV--L-----GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV 152 (339)
T ss_pred EEcccc-CCCCCccccCcCcccCCCCce--E-----EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence 887665 699999999999999976432 1 11235899999999999999999999998876 55677788854
Q ss_pred HHhccCCCCCCEEEEECCChHHHHHHHHHHH-CCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---cCCcc
Q 019199 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSLD 246 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~-~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~d 246 (344)
. ....+++|++|+|+|+|++|++++|+|+. +|++ ++++++++++.+.+ +++|++++++.++......+ ..++|
T Consensus 153 ~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~g~~~d 230 (339)
T PRK10083 153 T-GRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALA-KESGADWVINNAQEPLGEALEEKGIKPT 230 (339)
T ss_pred H-HhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH-HHhCCcEEecCccccHHHHHhcCCCCCC
Confidence 4 45566999999999999999999999996 6995 67777778888777 68999999987654333332 23467
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc-------eee--eechHhHHHHHHHHHhCCCcc---ceEE
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-------SLN--IGGTKDTQEMLEYCAAHKIYP---QIET 313 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~g~~~~---~~~~ 313 (344)
++||++|+...+..++++++++|+++.+|.. ....+... .+. ....+.++++++++.++.+++ ..++
T Consensus 231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 310 (339)
T PRK10083 231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHT 310 (339)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeee
Confidence 9999999776799999999999999999865 21111111 000 123467899999999999986 3489
Q ss_pred EeCccHHHHHHHHHcCC-cceEEEEEeCC
Q 019199 314 IPIENVNEALERLIKRD-VKYRFVIDIQN 341 (344)
Q Consensus 314 ~~~~~~~~a~~~~~~~~-~~gkvvi~~~~ 341 (344)
|+++++++|++.+.+++ ..+|+++++.+
T Consensus 311 ~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 311 FDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 99999999999998654 46999998763
No 36
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.8e-40 Score=304.38 Aligned_cols=319 Identities=30% Similarity=0.466 Sum_probs=265.7
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
+++++..+.+.+.+.+.+.|++.+++|+||+.++++|++|+....|... ...+|.++|||++|+|+++|+++++|++
T Consensus 2 ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 81 (340)
T cd05284 2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKE 81 (340)
T ss_pred eeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcC
Confidence 3455443335688888999999999999999999999999988877653 3456789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t 167 (344)
||+|+..+.. .|+.|..|..|..+.|++..+. ++ ...|+|++|+.++++.++++|+++++.+++++++.+.|
T Consensus 82 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~t 153 (340)
T cd05284 82 GDPVVVHPPW-GCGTCRYCRRGEENYCENARFP--GI-----GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLT 153 (340)
T ss_pred CCEEEEcCCC-CCCCChHHhCcCcccCCCCccc--Cc-----cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHH
Confidence 9999887664 7999999999999999987542 21 34589999999999999999999999999999999999
Q ss_pred hHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc-
Q 019199 168 VYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG- 242 (344)
Q Consensus 168 a~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~- 242 (344)
||+++... ..+.++++|||+|+|++|++++++|+.+| .+|+++++++++.+.+ +++|++++++.+.. +.+.+..
T Consensus 154 a~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~ 232 (340)
T cd05284 154 AYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRELTG 232 (340)
T ss_pred HHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHHHhC
Confidence 99999776 45688999999999889999999999999 7999999988888888 78999998887764 2223332
Q ss_pred -CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCCce-------ee---eechHhHHHHHHHHHhCCCccce
Q 019199 243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPAS-------LN---IGGTKDTQEMLEYCAAHKIYPQI 311 (344)
Q Consensus 243 -~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~g~~~~~~ 311 (344)
+++|+++|++|+......++++++++|+++.+|......++... +. ....+.++++++++.++.+++.+
T Consensus 233 ~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~ 312 (340)
T cd05284 233 GRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVEI 312 (340)
T ss_pred CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcce
Confidence 47999999999766699999999999999999865222222111 11 22456788999999999998777
Q ss_pred EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 312 ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+.|+++++++|++.+.+++..||+++.
T Consensus 313 ~~~~~~~~~~a~~~~~~~~~~gkvv~~ 339 (340)
T cd05284 313 TKFPLEDANEALDRLREGRVTGRAVLV 339 (340)
T ss_pred EEEeHHHHHHHHHHHHcCCccceEEec
Confidence 889999999999999999888999975
No 37
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=5.8e-40 Score=304.97 Aligned_cols=326 Identities=27% Similarity=0.419 Sum_probs=261.9
Q ss_pred cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
|+++++++.+.++.+++++.+.|.+.++||+||+.++++|++|+....|..+ ..+|.++|||++|+|+++|+++..|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4556666665456788899999999999999999999999999999887664 346789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccc-cccccCCC---------------CccCCcceeEEEEecceEEEcCC
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDADG---------------TITKGGYSSYIVVHERYCYKIAN 151 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~~~---------------~~~~g~~~~~~~~~~~~~~~~P~ 151 (344)
||+|++.+. .|+.|.+|+.+..++|...... +.+...+| ....|+|++|+.++++.++++|+
T Consensus 80 Gd~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA--SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc--CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999987553 7999999999999999865321 11111000 11258999999999999999999
Q ss_pred CCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEE
Q 019199 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFV 230 (344)
Q Consensus 152 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v 230 (344)
++++.+++++++++.||+.++.....+++|++|||+|+|++|++++++|+.+|+ +|+++++++++.+.+ +++|++.++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~-~~~g~~~~i 236 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA-KELGATHVI 236 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCcEEe
Confidence 999999999999999999998777777999999999889999999999999999 688888888888777 689999988
Q ss_pred eCCCHHH---HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCcee-------e--e----e
Q 019199 231 VSSDLEQ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASL-------N--I----G 290 (344)
Q Consensus 231 ~~~~~~~---~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~-------~--~----~ 290 (344)
+.++.+. +.+. .+++|+++|++|+...+..++++++++|+++.+|.. ....++...+ . . .
T Consensus 237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (365)
T cd08278 237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV 316 (365)
T ss_pred cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence 8765322 2222 467999999999876799999999999999999854 1222222211 0 0 1
Q ss_pred chHhHHHHHHHHHhCCCcc--ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 291 GTKDTQEMLEYCAAHKIYP--QIETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
..+.++++++++.++.+.+ .+..|++++++++++.+.+++. -|++|+
T Consensus 317 ~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 317 PQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred hHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence 1346788999999999864 3578999999999999988764 488763
No 38
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=8.9e-40 Score=300.82 Aligned_cols=319 Identities=27% Similarity=0.490 Sum_probs=260.1
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
+++..+......+++++.|.+.++||+||+.++++|++|+....|..+. ..|.++|||++|+|+++|++++.|++||+|
T Consensus 3 a~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V 81 (338)
T PRK09422 3 AAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGDRV 81 (338)
T ss_pred EEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCCEE
Confidence 4444433333338899999999999999999999999999888776542 336789999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~ 171 (344)
+..+....|++|.+|..+..+.|.+... .|....|+|++|+.++.+.++++|+++++.+++.++..+.|||++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~ 154 (338)
T PRK09422 82 SIAWFFEGCGHCEYCTTGRETLCRSVKN-------AGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKA 154 (338)
T ss_pred EEccCCCCCCCChhhcCCCcccCCCccc-------cCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHH
Confidence 9888888999999999999999986532 122346899999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCEEEEECCChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-H---HHHHHhcCCcc
Q 019199 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-L---EQMKALGKSLD 246 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~-~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~---~~~~~~~~~~d 246 (344)
+ ....+++|++|||+|+|++|++++++|+. .|++|+++++++++.+.+ +++|++.+++.+. . +.+.+..+++|
T Consensus 155 ~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~~~~~d 232 (338)
T PRK09422 155 I-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALA-KEVGADLTINSKRVEDVAKIIQEKTGGAH 232 (338)
T ss_pred H-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH-HHcCCcEEecccccccHHHHHHHhcCCCc
Confidence 8 44556999999999999999999999998 599999999999999988 7899998888753 2 23333445789
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc-------eee---eechHhHHHHHHHHHhCCCccceEEEe
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYPQIETIP 315 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (344)
+++++.++...+..++++++++|+++.+|.. ....++.. .+. ....+.++++++++.++.+.+.+..++
T Consensus 233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~~~ 312 (338)
T PRK09422 233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRP 312 (338)
T ss_pred EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEEEEc
Confidence 5555555555699999999999999999865 22222211 111 113577899999999999977677799
Q ss_pred CccHHHHHHHHHcCCcceEEEEEeC
Q 019199 316 IENVNEALERLIKRDVKYRFVIDIQ 340 (344)
Q Consensus 316 ~~~~~~a~~~~~~~~~~gkvvi~~~ 340 (344)
+++++++++.+.+++..||+++.++
T Consensus 313 ~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 313 LEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHHHcCCccceEEEecC
Confidence 9999999999999998899998754
No 39
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.8e-40 Score=311.27 Aligned_cols=312 Identities=19% Similarity=0.292 Sum_probs=239.5
Q ss_pred cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhh-cCCCC------CCCCCCCcccccceEEEEecC
Q 019199 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWT-RNKHG------DSKYPLVPGHEIVGIVKEVGH 80 (344)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~------~~~~p~~~G~e~~G~V~~~G~ 80 (344)
|+++++..++ ++.+++++++.|+|.++||+|||.++|+|++|++.+ .|... ...+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~-~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYG-KGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEc-CCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5677888774 457899999999999999999999999999999865 44321 124688999999999999999
Q ss_pred CCC-CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc----eEEEcCCCCCc
Q 019199 81 NVS-RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER----YCYKIANDYPL 155 (344)
Q Consensus 81 ~~~-~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~P~~~~~ 155 (344)
+++ .|++||+|++.+.. .|++|.+|. + + |....|+|+||+.++++ .++++|+++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~-~-------~----------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~ 140 (410)
T cd08238 80 KWQGKYKPGQRFVIQPAL-ILPDGPSCP-G-------Y----------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY 140 (410)
T ss_pred CccCCCCCCCEEEEcCCc-CCCCCCCCC-C-------c----------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence 998 69999999887654 688887762 1 1 11245899999999987 68999999999
Q ss_pred cccccc---chhhhHhHHHHH--------hccCCCCCCEEEEECC-ChHHHHHHHHHHHCCC---eEEEEeCCchhHHHH
Q 019199 156 ALAAPL---LCAGITVYTPMM--------RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGL---NVTVLSTSTSKKEEA 220 (344)
Q Consensus 156 ~~aa~l---~~~~~ta~~~l~--------~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~---~V~~~~~~~~~~~~~ 220 (344)
.+++.+ ++. .+++.++. +...+++|++|+|+|+ |++|++++|+|+.+|+ +|++++.+++|++.+
T Consensus 141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 988743 232 22343322 3345689999999985 9999999999999754 799999999999988
Q ss_pred HHhC--------CCc-EEEeCCC-HH---HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--C--ccc
Q 019199 221 LSLL--------GAD-KFVVSSD-LE---QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--S--KVK 281 (344)
Q Consensus 221 ~~~~--------g~~-~~v~~~~-~~---~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~--~~~ 281 (344)
+++ |++ .+++..+ .+ .+.+.+ +++|++||++|+..++..++++++++|+++.++.. . ..+
T Consensus 220 -~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~ 298 (410)
T cd08238 220 -QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP 298 (410)
T ss_pred -HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence 465 665 4666543 22 233333 47999999999877899999999999988876432 1 123
Q ss_pred cCCceee----------eechHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199 282 FSPASLN----------IGGTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS 342 (344)
Q Consensus 282 ~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 342 (344)
++...+. ....++++++++++++|++++ .+ ++|+++|+++|++.+. ++..||+|+..+..
T Consensus 299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~~~ 371 (410)
T cd08238 299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQKP 371 (410)
T ss_pred ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECCCC
Confidence 3322221 123468999999999999987 34 8999999999999998 77789999988644
No 40
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=6.1e-39 Score=296.27 Aligned_cols=319 Identities=23% Similarity=0.355 Sum_probs=258.9
Q ss_pred eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
++... .++.+.+.+++.|.| .+++|+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+++++|++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 81 (347)
T cd05278 3 ALVYL-GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDR 81 (347)
T ss_pred eEEEe-cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCCE
Confidence 44443 345688889999999 9999999999999999999988887765667899999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHh
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta 168 (344)
|+..+.+ .|+.|.+|.+|+.+.|+...+... .+....|+|++|++++++ .++++|++++..+++.+++.+.||
T Consensus 82 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta 156 (347)
T cd05278 82 VSVPCIT-FCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG 156 (347)
T ss_pred EEecCCC-CCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence 9887554 899999999999999987432211 122345899999999987 899999999999999999999999
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG-- 242 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~-- 242 (344)
|+++ ....+++|++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|++.+++.++.+.. .+..
T Consensus 157 ~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~i~~~~~~ 234 (347)
T cd05278 157 FHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLA-KEAGATDIINPKNGDIVEQILELTGG 234 (347)
T ss_pred eehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH-HHhCCcEEEcCCcchHHHHHHHHcCC
Confidence 9998 45667999999998889999999999999997 888887777777766 68899999887765432 2222
Q ss_pred CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccc---cC--Cc--eee-----eechHhHHHHHHHHHhCCCccc
Q 019199 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVK---FS--PA--SLN-----IGGTKDTQEMLEYCAAHKIYPQ 310 (344)
Q Consensus 243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~---~~--~~--~~~-----~~~~~~~~~~~~~~~~g~~~~~ 310 (344)
+++|++||++++...+..++++++++|+++.+|...... .. .+ ... ....+.++++++++.++.+.+.
T Consensus 235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (347)
T cd05278 235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPS 314 (347)
T ss_pred CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChh
Confidence 579999999998545999999999999999998651111 11 11 001 1124678899999999999863
Q ss_pred ---eEEEeCccHHHHHHHHHcCCc-ceEEEEE
Q 019199 311 ---IETIPIENVNEALERLIKRDV-KYRFVID 338 (344)
Q Consensus 311 ---~~~~~~~~~~~a~~~~~~~~~-~gkvvi~ 338 (344)
...|++++++++++.+.+++. .+|++++
T Consensus 315 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 315 KLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred HcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 478999999999999988776 6898875
No 41
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=9.3e-39 Score=294.43 Aligned_cols=322 Identities=32% Similarity=0.567 Sum_probs=267.1
Q ss_pred cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCC
Q 019199 8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFK 86 (344)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~ 86 (344)
|++..+...+ +..+++.+++.|.|.++|++||+.++++|++|...+.+..+ ....|.++|||++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 3444444332 45788999999999999999999999999999988877654 234466899999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166 (344)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ 166 (344)
+||+|+..+...+|++|.+|..++.+.|++.... |....|++++|+.++++.++++|++++..++++++..+.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ 152 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV 152 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence 9999998877778999999999999999875221 112358899999999999999999999999999999999
Q ss_pred HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh-
Q 019199 167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL- 241 (344)
Q Consensus 167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~- 241 (344)
|||+++... .+++++++||+|+ +.+|++++++|+.+|++|+++++++++.+.+ +++|++.+++.++.+. +.+.
T Consensus 153 ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~ 230 (341)
T cd08297 153 TVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT 230 (341)
T ss_pred HHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh
Confidence 999998776 5699999999998 6799999999999999999999999998888 6899999888776433 2233
Q ss_pred -cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-----e-----eechHhHHHHHHHHHhCCCc
Q 019199 242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-----N-----IGGTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 242 -~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~g~~~ 308 (344)
.+++|+++|+.++...+..++++++++|+++.+|... ..+++...+ . ....+.++++++++.+++++
T Consensus 231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (341)
T cd08297 231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK 310 (341)
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc
Confidence 3679999998776667999999999999999998652 112222211 1 11257899999999999998
Q ss_pred cceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 309 PQIETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 309 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+.++.|++++++++++.+..++..||+++++
T Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 311 PHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 7778899999999999999998889999875
No 42
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=8e-39 Score=295.91 Aligned_cols=319 Identities=30% Similarity=0.474 Sum_probs=262.2
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC------------CCCCCCCcccccceEEEEe
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG------------DSKYPLVPGHEIVGIVKEV 78 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~~ 78 (344)
+++.+......+++.+.+.|++.++||+||+.++++|++|+..+.|..+ ...+|.++|||++|+|+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 81 (350)
T cd08240 2 KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAV 81 (350)
T ss_pred eeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEee
Confidence 4455554555588899999999999999999999999999988776542 1235678999999999999
Q ss_pred cCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc
Q 019199 79 GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA 158 (344)
Q Consensus 79 G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a 158 (344)
|++++++++||+|+..+.. .|+.|..|.++..+.|.+.... + ....|++++|+.++.+.++++|+++++.++
T Consensus 82 G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~g~~~~~~~~~~~~~~~~p~~~s~~~a 153 (350)
T cd08240 82 GPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL--G-----IFQDGGYAEYVIVPHSRYLVDPGGLDPALA 153 (350)
T ss_pred CCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce--e-----eeccCcceeeEEecHHHeeeCCCCCCHHHe
Confidence 9999999999999887665 8999999999999999764211 1 114589999999999999999999999999
Q ss_pred cccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (344)
Q Consensus 159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 237 (344)
+.+++.+.|||+++.....++++++|+|+|+|.+|++++++|+.+|+ +|++++.++++.+.+ +++|++.+++.++.+.
T Consensus 154 a~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 232 (350)
T cd08240 154 ATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAA-KAAGADVVVNGSDPDA 232 (350)
T ss_pred ehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCcEEecCCCccH
Confidence 99999999999999888876789999999889999999999999999 788888888888888 6899988888765432
Q ss_pred ---HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCc---cccC-----Cceee---eechHhHHHHHHHH
Q 019199 238 ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFS-----PASLN---IGGTKDTQEMLEYC 302 (344)
Q Consensus 238 ---~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~---~~~~-----~~~~~---~~~~~~~~~~~~~~ 302 (344)
+.+. .+++|++||++|+...+..++++++++|+++.+|.... ..+. ...+. ....+++.++++++
T Consensus 233 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll 312 (350)
T cd08240 233 AKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALA 312 (350)
T ss_pred HHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHH
Confidence 2222 24799999999976679999999999999999986511 1111 11111 12336788999999
Q ss_pred HhCCCccc-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 303 AAHKIYPQ-IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 303 ~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+++.+++. +..|++++++++++.+.+++..||+++.
T Consensus 313 ~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 313 KAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred HcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 99999764 4889999999999999998888999874
No 43
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=5.7e-39 Score=301.31 Aligned_cols=309 Identities=18% Similarity=0.265 Sum_probs=250.8
Q ss_pred CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC----------CCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG----------DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
.+++.+++.|.++++||+||+.++++|++|++...+... ....+.++|||++|+|+++|+.++.+++||+
T Consensus 29 ~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~ 108 (393)
T cd08246 29 AIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDE 108 (393)
T ss_pred ceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCE
Confidence 577888999999999999999999999999887765411 0112358899999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 170 (344)
|+..+.. .|++|..|..+..+.|+...+ .++. ...|+|++|+.+++..++++|+++++.+++.+++.+.|||+
T Consensus 109 V~~~~~~-~~~~~~~c~~~~~~~~~~~~~--~g~~----~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~ 181 (393)
T cd08246 109 VVVHCSV-WDGNDPERAGGDPMFDPSQRI--WGYE----TNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYR 181 (393)
T ss_pred EEEeccc-cccCccccccccccccccccc--cccc----CCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHH
Confidence 9887654 699999999999999986422 2211 23589999999999999999999999999999999999999
Q ss_pred HHHhc--cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH------------
Q 019199 171 PMMRH--KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL------------ 235 (344)
Q Consensus 171 ~l~~~--~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~------------ 235 (344)
++... ..+++|++|+|+|+ |++|++++++|+.+|++++++++++++++.+ +++|++++++.++.
T Consensus 182 al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~-~~~G~~~~i~~~~~~~~~~~~~~~~~ 260 (393)
T cd08246 182 MLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC-RALGAEGVINRRDFDHWGVLPDVNSE 260 (393)
T ss_pred HHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCCEEEcccccccccccccccch
Confidence 98655 55689999999997 9999999999999999999999888898888 67999988886321
Q ss_pred -------------HHHHHhc--C-CccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCceee---------
Q 019199 236 -------------EQMKALG--K-SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASLN--------- 288 (344)
Q Consensus 236 -------------~~~~~~~--~-~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~~--------- 288 (344)
+.+.+++ + ++|++||++|+.. +..++++++++|+++.+|... ...++...+.
T Consensus 261 ~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~ 339 (393)
T cd08246 261 AYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGS 339 (393)
T ss_pred hhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEec
Confidence 1122222 3 7999999999854 999999999999999998651 1122211111
Q ss_pred -eechHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcC-CcceEEEEE
Q 019199 289 -IGGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKR-DVKYRFVID 338 (344)
Q Consensus 289 -~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~-~~~gkvvi~ 338 (344)
....+.+.++++++.++.+.+.+ ++|++++++++++.+.++ +..||+++-
T Consensus 340 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 340 HFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred ccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 12235788999999999998654 899999999999999998 788999874
No 44
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=7.4e-39 Score=300.85 Aligned_cols=331 Identities=18% Similarity=0.266 Sum_probs=264.1
Q ss_pred Cccccccceeeeee--cC-CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC----------CCCCC-CCc
Q 019199 2 TSETASKDCLGWAA--RD-PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG----------DSKYP-LVP 67 (344)
Q Consensus 2 ~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~~~ 67 (344)
|-+..+|++..+.. ++ ++..+++.+++.|.|.+++|+||+.++++|++|++...+... ....| .++
T Consensus 2 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 81 (398)
T TIGR01751 2 TVVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII 81 (398)
T ss_pred cccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence 44556777777754 33 346688899999999999999999999999999876554321 01223 379
Q ss_pred ccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEE
Q 019199 68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147 (344)
Q Consensus 68 G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 147 (344)
|||++|+|+++|+.++.+++||+|+..+.. .|++|.+|..|+...|+...+ .+. ....|+|++|+.++++.++
T Consensus 82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~----~~~~g~~ae~~~v~~~~~~ 154 (398)
T TIGR01751 82 GSDASGVVWRVGPGVTRWKVGDEVVASCLQ-VDLTAPDGRVGDPMLSSEQRI--WGY----ETNFGSFAEFALVKDYQLM 154 (398)
T ss_pred ccceEEEEEEeCCCCCCCCCCCEEEEcccc-ccCCchhhccCcccccccccc--ccc----cCCCccceEEEEechHHeE
Confidence 999999999999999999999999887654 799999999999999975421 110 0135899999999999999
Q ss_pred EcCCCCCcccccccchhhhHhHHHHHh--ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC
Q 019199 148 KIANDYPLALAAPLLCAGITVYTPMMR--HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL 224 (344)
Q Consensus 148 ~~P~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~ 224 (344)
++|+++++.+++.+.+.+.|||+++.. ...+.+|++|+|+|+ |.+|++++++|+.+|++++++++++++.+.+ +++
T Consensus 155 ~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~-~~~ 233 (398)
T TIGR01751 155 PKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC-REL 233 (398)
T ss_pred ECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHc
Confidence 999999999999999999999999865 455689999999998 9999999999999999998888888888888 579
Q ss_pred CCcEEEeCCCHH-------------------------HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 225 GADKFVVSSDLE-------------------------QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 225 g~~~~v~~~~~~-------------------------~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
|++.++++++.+ .+.+.+ +++|++||++|... +..++++++++|+++.+|..
T Consensus 234 g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~ 312 (398)
T TIGR01751 234 GAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVCRRGGMVVICGGT 312 (398)
T ss_pred CCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhhccCCEEEEEccc
Confidence 999998865321 111222 57999999999754 99999999999999999875
Q ss_pred Cc--cccCCceee----------eechHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199 278 SK--VKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQN 341 (344)
Q Consensus 278 ~~--~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~ 341 (344)
.. ..++...+. ....+.++++++++.++.+.+.+ +++++++++++++.+.+++..||+|+.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 389 (398)
T TIGR01751 313 TGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA 389 (398)
T ss_pred cCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence 21 222211111 22234578899999999998755 899999999999999999989999998864
No 45
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=5.5e-39 Score=295.07 Aligned_cols=315 Identities=27% Similarity=0.414 Sum_probs=260.0
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
+++..++...+++++.+.|++.++|++||+.++++|++|+....|..+...+|.++|||++|+|+++|+.++.+++||+|
T Consensus 3 a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V 82 (334)
T PRK13771 3 AVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRV 82 (334)
T ss_pred eEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCCEE
Confidence 44444444568999999999999999999999999999998887766545667899999999999999999889999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~ 171 (344)
+..+. ..|++|.+|..|.++.|+..... +....|+|++|+.++.+.++++|+++++.+++.+++.+.+||++
T Consensus 83 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~ 154 (334)
T PRK13771 83 ASLLY-APDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG 154 (334)
T ss_pred EECCC-CCCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence 88755 48999999999999999885321 22346899999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HHHHHhcCCccEEE
Q 019199 172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQMKALGKSLDFII 249 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~~~dvvi 249 (344)
+... .++++++|+|+|+ |.+|++++++++.+|++|+++++++++.+.+ +++ ++++++.+.. +.+.+. +++|+++
T Consensus 155 ~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~-~~~d~~l 230 (334)
T PRK13771 155 LRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-ADYVIVGSKFSEEVKKI-GGADIVI 230 (334)
T ss_pred HHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HHHhcCchhHHHHHHhc-CCCcEEE
Confidence 9877 6799999999998 9999999999999999999999999988888 567 7666665421 222233 4799999
Q ss_pred ECCCCchhHHHHHHhcccCCEEEEEcCCCc-----cccCCc-----eee---eechHhHHHHHHHHHhCCCccce-EEEe
Q 019199 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSK-----VKFSPA-----SLN---IGGTKDTQEMLEYCAAHKIYPQI-ETIP 315 (344)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~-----~~~---~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 315 (344)
|++|+.. +..++++++++|+++.+|.... ..+... .+. ....+.++++++++.++.+++.+ +.|+
T Consensus 231 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 309 (334)
T PRK13771 231 ETVGTPT-LEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAEVS 309 (334)
T ss_pred EcCChHH-HHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEeeeEc
Confidence 9999865 8999999999999999986511 111100 111 22357889999999999998654 8999
Q ss_pred CccHHHHHHHHHcCCcceEEEEEe
Q 019199 316 IENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 316 ~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++++++|++.+.+++..||+++..
T Consensus 310 ~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 310 LSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcceEEEec
Confidence 999999999999888889999864
No 46
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=9.3e-39 Score=296.91 Aligned_cols=322 Identities=22% Similarity=0.340 Sum_probs=259.4
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
+++....++.++++++++|++.+++|+||+.++++|++|++.+.+... ..+|.++|||++|+|+++|++++.+++||+|
T Consensus 3 a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~V 81 (365)
T cd05279 3 AAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDKV 81 (365)
T ss_pred eeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCEE
Confidence 455555666789999999999999999999999999999998877654 3567899999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCcccccc-ccc-------------cCCCCccCCcceeEEEEecceEEEcCCCCCccc
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAI-------------DADGTITKGGYSSYIVVHERYCYKIANDYPLAL 157 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~-~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~ 157 (344)
+..+. .+|++|.+|..+.++.|....+.. .+. ...+....|+|++|+.++++.++++|+++++.+
T Consensus 82 v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~ 160 (365)
T cd05279 82 IPLFG-PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEK 160 (365)
T ss_pred EEcCC-CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHH
Confidence 88765 489999999999999998764321 111 111111247899999999999999999999999
Q ss_pred ccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCH-
Q 019199 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDL- 235 (344)
Q Consensus 158 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~- 235 (344)
++.+.+++.+||+++.....+++|++|||+|+|.+|++++++|+.+|++ |+++++++++.+.+ +++|++++++.++.
T Consensus 161 a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~ 239 (365)
T cd05279 161 VCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKA-KQLGATECINPRDQD 239 (365)
T ss_pred hhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCeeccccccc
Confidence 9999999999999987777789999999998899999999999999995 67777788888888 78999988887654
Q ss_pred -HH---HHH-hcCCccEEEECCCCchhHHHHHHhcc-cCCEEEEEcCC---CccccCCceee------------eechHh
Q 019199 236 -EQ---MKA-LGKSLDFIIDTASGDHPFDAYMSLLK-VAGVYVLVGFP---SKVKFSPASLN------------IGGTKD 294 (344)
Q Consensus 236 -~~---~~~-~~~~~dvvid~~g~~~~~~~~~~~l~-~~G~iv~~g~~---~~~~~~~~~~~------------~~~~~~ 294 (344)
+. +.+ ..+++|+++|++|....+..++++++ ++|+++.+|.. ....++...+. ....+.
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 319 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKDS 319 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHhH
Confidence 32 222 24689999999987667999999999 99999999854 22222222211 123467
Q ss_pred HHHHHHHHHhCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 295 TQEMLEYCAAHKIYP---QIETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 295 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
+.++++++.++.+.+ .+++|+++++++||+.+.+++. .|+++
T Consensus 320 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 320 VPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred HHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence 899999999999874 3488999999999999887664 46665
No 47
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.5e-39 Score=294.45 Aligned_cols=280 Identities=18% Similarity=0.227 Sum_probs=227.3
Q ss_pred CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC-CCCCCEEEEeccc
Q 019199 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR-FKVGDHVGVGTYV 97 (344)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~-~~~Gd~V~~~~~~ 97 (344)
..+++.+++.|+|+++||+||+.++++|++|++...|..+ ...+|.++|||++|+|+++|+++++ |++||+|+..+.
T Consensus 16 ~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~- 94 (324)
T cd08291 16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG- 94 (324)
T ss_pred cEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-
Confidence 3577888899999999999999999999999998887654 2456889999999999999999986 999999974220
Q ss_pred cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccC
Q 019199 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (344)
Q Consensus 98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~ 177 (344)
..|+|++|+.++++.++++|+++++.+++++++.+.|||..+. ...
T Consensus 95 ---------------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~-~~~ 140 (324)
T cd08291 95 ---------------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLE-TAR 140 (324)
T ss_pred ---------------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHH-hhc
Confidence 1389999999999999999999999999988888999986553 334
Q ss_pred CCCCCEEEEE-C-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEE
Q 019199 178 NQPGKSLGVI-G-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIID 250 (344)
Q Consensus 178 ~~~g~~vlI~-G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid 250 (344)
.++++++|+ | +|++|++++|+|+.+|++|+++++++++++.+ +++|++++++.+..+.. .+.. +++|++||
T Consensus 141 -~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid 218 (324)
T cd08291 141 -EEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL-KKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFD 218 (324)
T ss_pred -cCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEE
Confidence 356666664 4 59999999999999999999999999998888 68999999987765433 2332 57999999
Q ss_pred CCCCchhHHHHHHhcccCCEEEEEcCC-C-cc-ccCCc-------eee--e-------echHhHHHHHHHHHhCCCccce
Q 019199 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-S-KV-KFSPA-------SLN--I-------GGTKDTQEMLEYCAAHKIYPQI 311 (344)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~-~-~~-~~~~~-------~~~--~-------~~~~~~~~~~~~~~~g~~~~~~ 311 (344)
++|+.. ....+++++++|+++.+|.. . .. .++.. .+. . ...+.+++++++++ +.+++.+
T Consensus 219 ~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i 296 (324)
T cd08291 219 AVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTF 296 (324)
T ss_pred CCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccce
Confidence 999876 78889999999999999864 1 11 12111 111 0 11346788888888 8898876
Q ss_pred -EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 312 -ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 312 -~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
++|+++|+.+|++.+.+++..||+++.
T Consensus 297 ~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 297 ASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred eeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 899999999999999999989999873
No 48
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1e-38 Score=295.13 Aligned_cols=317 Identities=19% Similarity=0.301 Sum_probs=253.2
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---------CCCCCCCcccccceEEEEecCC
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---------DSKYPLVPGHEIVGIVKEVGHN 81 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---------~~~~p~~~G~e~~G~V~~~G~~ 81 (344)
++++.+ .++.+++++.+.|++.+++|+||+.++++|++|+..+.|... ..++|.++|||++|+|+++|+.
T Consensus 2 ka~~~~-~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~ 80 (350)
T cd08256 2 RAVVCH-GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG 80 (350)
T ss_pred eeEEEe-cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence 345554 456789999999999999999999999999999988877531 1146778999999999999999
Q ss_pred CC--CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc-eEEEcCCCCCcccc
Q 019199 82 VS--RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER-YCYKIANDYPLALA 158 (344)
Q Consensus 82 ~~--~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~P~~~~~~~a 158 (344)
++ .|++||+|+..+. .+|++|..|..|..+.|.... +.+... ...|+|++|+.++++ .++++|+++++.++
T Consensus 81 v~~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~---~~~g~~~~~~~~~~~~~~~~lP~~~~~~~a 154 (350)
T cd08256 81 AEERGVKVGDRVISEQI-VPCWNCRFCNRGQYWMCQKHD--LYGFQN---NVNGGMAEYMRFPKEAIVHKVPDDIPPEDA 154 (350)
T ss_pred cccCCCCCCCEEEECCc-CCCCCChHHhCcCcccCcCcc--ceeecc---CCCCcceeeEEcccccceEECCCCCCHHHH
Confidence 98 8999999987654 489999999999999997542 222111 145899999999988 57899999999999
Q ss_pred cccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH-
Q 019199 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE- 236 (344)
Q Consensus 159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~- 236 (344)
+.+ .++.|+|.++ ....+++|++|+|.|+|++|++++++|+.+|++ ++++++++++...+ +++|++.+++....+
T Consensus 155 a~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~ 231 (350)
T cd08256 155 ILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA-RKFGADVVLNPPEVDV 231 (350)
T ss_pred hhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH-HHcCCcEEecCCCcCH
Confidence 887 7889999998 555669999999977899999999999999984 67777787777766 789999888776432
Q ss_pred --HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCcee--------e--eechHhHHHHHHH
Q 019199 237 --QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASL--------N--IGGTKDTQEMLEY 301 (344)
Q Consensus 237 --~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~--------~--~~~~~~~~~~~~~ 301 (344)
.+.+.. .++|++||++|+...+..++++++++|+++.+|.. ....+....+ . ......+++++++
T Consensus 232 ~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 311 (350)
T cd08256 232 VEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDL 311 (350)
T ss_pred HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHH
Confidence 233332 46999999999765689999999999999999865 2222221111 0 1223468889999
Q ss_pred HHhCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 302 CAAHKIYP---QIETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 302 ~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
+.++.+++ ..+.|+++++++|++.+.+++..+|+++
T Consensus 312 ~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 312 IASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 99999986 3589999999999999999888899874
No 49
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.3e-38 Score=295.83 Aligned_cols=323 Identities=24% Similarity=0.393 Sum_probs=260.9
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+++......+.+++++++.|++.+++|+||+.++++|+.|...+.|..+ ..+|.++|||++|+|+++|++++.|++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (363)
T cd08279 2 RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGDH 80 (363)
T ss_pred eEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCCE
Confidence 3555544446788899999999999999999999999999988887664 356788999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccc--------cCCC-----CccCCcceeEEEEecceEEEcCCCCCccc
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAI--------DADG-----TITKGGYSSYIVVHERYCYKIANDYPLAL 157 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~--------~~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~~~~ 157 (344)
|+..+.. .|++|.+|.+++.+.|.+..+...+. ..+| ....|+|++|+.++++.++++|+++++.+
T Consensus 81 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 81 VVLSWIP-ACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEECCCC-CCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 9876654 89999999999999998653211111 1111 12358999999999999999999999999
Q ss_pred ccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH
Q 019199 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE 236 (344)
Q Consensus 158 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 236 (344)
++.+++.+.|||.++.....+.+|++|||+|+|.+|++++++|+.+|++ |+++++++++.+.+ +++|++++++.+..+
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~ 238 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELA-RRFGATHTVNASEDD 238 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHhCCeEEeCCCCcc
Confidence 9999999999999987777789999999998899999999999999995 88888888888877 689999888876543
Q ss_pred H---HHHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCceee-------------eechHhH
Q 019199 237 Q---MKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASLN-------------IGGTKDT 295 (344)
Q Consensus 237 ~---~~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~-------------~~~~~~~ 295 (344)
. +.+. .+++|+++|++++...+..++++++++|+++.+|... ...++...+. ....+.+
T Consensus 239 ~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (363)
T cd08279 239 AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDI 318 (363)
T ss_pred HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHH
Confidence 3 3333 3679999999997666899999999999999997541 2222222111 0234678
Q ss_pred HHHHHHHHhCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEE
Q 019199 296 QEMLEYCAAHKIYP---QIETIPIENVNEALERLIKRDVKYRFV 336 (344)
Q Consensus 296 ~~~~~~~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv 336 (344)
+++++++.++.+++ ..++|+++++.+|++.+.+++..+.|+
T Consensus 319 ~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 319 PRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 99999999999975 347899999999999999888765544
No 50
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.8e-38 Score=297.03 Aligned_cols=323 Identities=22% Similarity=0.306 Sum_probs=256.2
Q ss_pred eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
++.+. .++.+++++++.|.| ++++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|+.++++++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 81 (386)
T cd08283 3 ALVWH-GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDR 81 (386)
T ss_pred eEEEe-cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Confidence 34444 457789999999998 4999999999999999999999887755566889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCcccccc--------ccccCCC-----CccCCcceeEEEEecc--eEEEcCCCCCc
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTF--------NAIDADG-----TITKGGYSSYIVVHER--YCYKIANDYPL 155 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~--------~~~~~~~-----~~~~g~~~~~~~~~~~--~~~~~P~~~~~ 155 (344)
|+..+.. .|++|.+|..+.++.|.+..... ...+..+ ....|+|++|+.++.+ .++++|+++++
T Consensus 82 V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~ 160 (386)
T cd08283 82 VVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSD 160 (386)
T ss_pred EEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCH
Confidence 9887655 69999999999999998743211 0000101 0136899999999987 89999999999
Q ss_pred ccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199 156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD 234 (344)
Q Consensus 156 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 234 (344)
.+++.++..+.|||+++ ....+++|++|||+|+|.+|++++++|+.+|+ +|++++.++++.+.+ ++++...+++...
T Consensus 161 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~-~~~~~~~vi~~~~ 238 (386)
T cd08283 161 EKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMA-RSHLGAETINFEE 238 (386)
T ss_pred HHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCcEEEcCCc
Confidence 99999999999999999 56667999999999889999999999999998 699999999998888 5664345676654
Q ss_pred HH-HHH---Hhc--CCccEEEECCCCc---------------------hhHHHHHHhcccCCEEEEEcCCCc--cccCCc
Q 019199 235 LE-QMK---ALG--KSLDFIIDTASGD---------------------HPFDAYMSLLKVAGVYVLVGFPSK--VKFSPA 285 (344)
Q Consensus 235 ~~-~~~---~~~--~~~dvvid~~g~~---------------------~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~ 285 (344)
.+ ... +.. +++|++||++|+. ..+..++++++++|+++.+|.... ..++..
T Consensus 239 ~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~ 318 (386)
T cd08283 239 VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIG 318 (386)
T ss_pred chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHH
Confidence 42 222 222 4799999999753 347889999999999999986521 111110
Q ss_pred -------eee---eechHhHHHHHHHHHhCCCcc---ceEEEeCccHHHHHHHHHcCC-cceEEEEE
Q 019199 286 -------SLN---IGGTKDTQEMLEYCAAHKIYP---QIETIPIENVNEALERLIKRD-VKYRFVID 338 (344)
Q Consensus 286 -------~~~---~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~ 338 (344)
.+. ....+.++++++++.++++.+ ..+.|+++++.+|++.+.+++ ..+|++|+
T Consensus 319 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 319 AAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred HHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 000 122357889999999999976 238899999999999988876 45899985
No 51
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.6e-38 Score=291.45 Aligned_cols=303 Identities=36% Similarity=0.564 Sum_probs=256.4
Q ss_pred CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCC
Q 019199 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSC 100 (344)
Q Consensus 21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c 100 (344)
.+++.+.+.|.+.++||+||+.++++|++|+....|..+...+|.++|||++|+|+++|++++++++||+|++.+.+..|
T Consensus 16 ~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 95 (329)
T cd08298 16 PLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTC 95 (329)
T ss_pred CceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCC
Confidence 67777888888999999999999999999999888866555668899999999999999999999999999888777789
Q ss_pred CCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCC
Q 019199 101 RDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180 (344)
Q Consensus 101 ~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 180 (344)
++|.+|..+..++|+...+. +....|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++ ...++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~ 167 (329)
T cd08298 96 GECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKP 167 (329)
T ss_pred CCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCC
Confidence 99999999999999876432 112358899999999999999999999999999999999999999 6677799
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHH
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA 260 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~ 260 (344)
+++++|+|+|++|++++++++..|++|+++++++++.+.+ +++|++.+++.... ..+++|+++++.+....+..
T Consensus 168 ~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~~~~ 241 (329)
T cd08298 168 GQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELA-RELGADWAGDSDDL-----PPEPLDAAIIFAPVGALVPA 241 (329)
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHH-HHhCCcEEeccCcc-----CCCcccEEEEcCCcHHHHHH
Confidence 9999999999999999999999999999999999888888 78999887766532 23579999998766666999
Q ss_pred HHHhcccCCEEEEEcCCC-cc-ccCCceee---------eechHhHHHHHHHHHhCCCccceEEEeCccHHHHHHHHHcC
Q 019199 261 YMSLLKVAGVYVLVGFPS-KV-KFSPASLN---------IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKR 329 (344)
Q Consensus 261 ~~~~l~~~G~iv~~g~~~-~~-~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~~~~~ 329 (344)
++++++++|+++.+|... .. .++...+. ....+.++.+++++.++.+++.+++|+++++++|++.+.++
T Consensus 242 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~~~~~ 321 (329)
T cd08298 242 ALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVETYPLEEANEALQDLKEG 321 (329)
T ss_pred HHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHHHHcC
Confidence 999999999999988541 11 11100000 12345788899999999998767899999999999999999
Q ss_pred CcceEEEE
Q 019199 330 DVKYRFVI 337 (344)
Q Consensus 330 ~~~gkvvi 337 (344)
+..||+|+
T Consensus 322 ~~~~~~v~ 329 (329)
T cd08298 322 RIRGAAVL 329 (329)
T ss_pred CCcceeeC
Confidence 98899874
No 52
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.3e-38 Score=292.10 Aligned_cols=317 Identities=42% Similarity=0.698 Sum_probs=264.1
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
++.+.+..+.+++.+.+.|.+.+++++|++.++++|++|...+.+......+|.++|||++|+|+++|+++++|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V 81 (330)
T cd08245 2 AAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRV 81 (330)
T ss_pred eEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEE
Confidence 44554454678999999999999999999999999999998888766544568899999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~ 171 (344)
++.+...+|+.|.+|.+++.+.|++..+. + ....|++++|+.+++..++++|+++++.+++.+++.+.|||++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~ 154 (330)
T cd08245 82 GVGWLVGSCGRCEYCRRGLENLCQKAVNT--G-----YTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA 154 (330)
T ss_pred EEccccCCCCCChhhhCcCcccCcCcccc--C-----cccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 88776568999999999999999985332 1 1135889999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEEC
Q 019199 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDT 251 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~ 251 (344)
+.. ..++++++|+|+|+|.+|++++++|+.+|++|+++++++++.+.+ +++|++.+++...........+++|+++|+
T Consensus 155 l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (330)
T cd08245 155 LRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVILVT 232 (330)
T ss_pred HHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence 876 456999999999988899999999999999999999999998888 678988888765543333333579999999
Q ss_pred CCCchhHHHHHHhcccCCEEEEEcCC--CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccH
Q 019199 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENV 319 (344)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (344)
++.......++++++++|+++.+|.. ....+....+. ....+.++++++++.++.+++.++.|+++++
T Consensus 233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~ 312 (330)
T cd08245 233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQA 312 (330)
T ss_pred CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHH
Confidence 88766799999999999999999854 11111111111 1145678889999999999876789999999
Q ss_pred HHHHHHHHcCCcceEEEE
Q 019199 320 NEALERLIKRDVKYRFVI 337 (344)
Q Consensus 320 ~~a~~~~~~~~~~gkvvi 337 (344)
.++|+.+.+++..||+|+
T Consensus 313 ~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 313 NEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHcCCCCcceeC
Confidence 999999999988899875
No 53
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3.9e-38 Score=290.78 Aligned_cols=319 Identities=27% Similarity=0.378 Sum_probs=262.7
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
++|........+.+.+++.|.+.+++|+||+.++++|++|+....|..+...+|.++|||++|+|+++|++++.|++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~ 81 (345)
T cd08260 2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDR 81 (345)
T ss_pred eeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCCE
Confidence 44444434445888899999999999999999999999999888876654456789999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHh
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta 168 (344)
|+. +....|++|.+|..|..+.|..... . +....|+|++|+.+++. .++++|+++++.+++.++..+.||
T Consensus 82 V~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta 153 (345)
T cd08260 82 VTV-PFVLGCGTCPYCRAGDSNVCEHQVQ--P-----GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATA 153 (345)
T ss_pred EEE-CCCCCCCCCccccCcCcccCCCCcc--c-----ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHH
Confidence 977 4446899999999999999997421 1 11235899999999975 899999999999999999999999
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-HHHH---HHhc-C
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LEQM---KALG-K 243 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~~---~~~~-~ 243 (344)
|+++.....+.++++|+|+|+|.+|++++++|+.+|++|+++++++++.+.+ +++|++++++.+. .+.. .+.. +
T Consensus 154 ~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~ 232 (345)
T cd08260 154 FRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVATVNASEVEDVAAAVRDLTGG 232 (345)
T ss_pred HHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCEEEccccchhHHHHHHHHhCC
Confidence 9998777777999999999999999999999999999999999999998888 6799999998876 3332 2222 4
Q ss_pred CccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--c--cccCCcee-------e---eechHhHHHHHHHHHhCCCcc
Q 019199 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--K--VKFSPASL-------N---IGGTKDTQEMLEYCAAHKIYP 309 (344)
Q Consensus 244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~--~~~~~~~~-------~---~~~~~~~~~~~~~~~~g~~~~ 309 (344)
++|++||++|+...+...+++++++|+++.+|... . ..++...+ . ....+.+++++++++++++.+
T Consensus 233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~ 312 (345)
T cd08260 233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDP 312 (345)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCCh
Confidence 79999999997656899999999999999998651 1 22221111 1 223467899999999999875
Q ss_pred ---ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 310 ---QIETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 310 ---~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
..+.+++++++++++.+.+++..||+|+.
T Consensus 313 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 313 EPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred hhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 34889999999999999999888998863
No 54
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=5.3e-38 Score=289.84 Aligned_cols=319 Identities=22% Similarity=0.356 Sum_probs=257.5
Q ss_pred eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
++.+. .++.+++++++.|+| .++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++.+++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~ 81 (345)
T cd08286 3 ALVYH-GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDR 81 (345)
T ss_pred eEEEe-cCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCCCE
Confidence 34443 344688999999996 8999999999999999999998887654455789999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHh
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta 168 (344)
|++.+.. .|++|.+|..+..+.|....+. . +....|++++|+.++.+ .++++|++++..+++.+++.+.||
T Consensus 82 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta 154 (345)
T cd08286 82 VLISCIS-SCGTCGYCRKGLYSHCESGGWI-L-----GNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTG 154 (345)
T ss_pred EEECCcC-CCCCChHHHCcCcccCCCcccc-c-----ccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHH
Confidence 9887665 7999999999999988865331 1 22345899999999987 899999999999999999999999
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHh--c
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KAL--G 242 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~--~ 242 (344)
|.++.....+++|++|||.|+|.+|++++|+|+.+| .+|+++++++++...+ +++|++.+++....+.. .+. .
T Consensus 155 ~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~~~~~~ 233 (345)
T cd08286 155 YECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVA-KKLGATHTVNSAKGDAIEQVLELTDG 233 (345)
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCceeccccccHHHHHHHHhCC
Confidence 987766667799999999988999999999999999 6899988888787766 68999998887654322 222 2
Q ss_pred CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eechHhHHHHHHHHHhCCCcc---
Q 019199 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGTKDTQEMLEYCAAHKIYP--- 309 (344)
Q Consensus 243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~--- 309 (344)
+++|++||+++....+..+++.++++|+++.+|.. ....++..... ....+.+++++++++++.+++
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (345)
T cd08286 234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKL 313 (345)
T ss_pred CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHc
Confidence 57999999998766689999999999999999865 22222221111 111256888999999999875
Q ss_pred ceEEEeCccHHHHHHHHHcCC--cceEEEEEe
Q 019199 310 QIETIPIENVNEALERLIKRD--VKYRFVIDI 339 (344)
Q Consensus 310 ~~~~~~~~~~~~a~~~~~~~~--~~gkvvi~~ 339 (344)
..++|++++++++++.+.+.. ...|++|++
T Consensus 314 ~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 314 VTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred EEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 248899999999999998764 345998863
No 55
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.1e-38 Score=267.79 Aligned_cols=302 Identities=23% Similarity=0.256 Sum_probs=250.1
Q ss_pred ccccccceeeeeecCCC-CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecC
Q 019199 3 SETASKDCLGWAARDPS-GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGH 80 (344)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~ 80 (344)
.|+.+.++++|..++.| ..+++.+++.|+....+|+||..|+.|||+|+..++|.++ .+.+|.+-|+|++|+|+.+|+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs 94 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS 94 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence 45677888888888654 5578899999998888899999999999999999999998 667899999999999999999
Q ss_pred CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199 81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP 160 (344)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~ 160 (344)
++++|++||+|+... ...|+|++|...+++.++++++.++++.||+
T Consensus 95 ~vkgfk~Gd~VIp~~----------------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT 140 (354)
T KOG0025|consen 95 NVKGFKPGDWVIPLS----------------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAAT 140 (354)
T ss_pred CcCccCCCCeEeecC----------------------------------CCCccceeeEeecccceEEcCCcCChhhhhe
Confidence 999999999997544 3458999999999999999999999999999
Q ss_pred cchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCcEEEeCCCHH
Q 019199 161 LLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKFVVSSDLE 236 (344)
Q Consensus 161 l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~~~v~~~~~~ 236 (344)
+.++..|||++|.+--.+++||+|+-.|+ +++|++.+|+||++|++-+-+.|+....+++ ++.+||+++|..++..
T Consensus 141 ~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~ 220 (354)
T KOG0025|consen 141 LSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR 220 (354)
T ss_pred eccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc
Confidence 99999999999999999999999999998 9999999999999999887777765544333 4668999998765432
Q ss_pred ---HHHH--hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCceee---------ee----------
Q 019199 237 ---QMKA--LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN---------IG---------- 290 (344)
Q Consensus 237 ---~~~~--~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~---------~~---------- 290 (344)
.... ...++.+.|||+|+.. ...+.+.|.++|..+.+|.. ...+++...++ +.
T Consensus 221 ~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~p 299 (354)
T KOG0025|consen 221 DRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSP 299 (354)
T ss_pred chhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCc
Confidence 1111 1357899999999987 88999999999999999866 55566655544 11
Q ss_pred --chHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCc-ceEEEEEe
Q 019199 291 --GTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDV-KYRFVIDI 339 (344)
Q Consensus 291 --~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~ 339 (344)
..+.++++.+|+..|+|+.+. +..++++-..|++...+... .||-+|.+
T Consensus 300 e~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 300 EERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred HHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 114678889999999998765 78899999888886666433 36666654
No 56
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=7.5e-38 Score=287.79 Aligned_cols=309 Identities=35% Similarity=0.482 Sum_probs=259.6
Q ss_pred ccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCC
Q 019199 22 LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSC 100 (344)
Q Consensus 22 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c 100 (344)
+.+.+.+.|.+.+++|+|++.++++|+.|.....|... ...+|.++|+|++|+|+++|++++.+++||+|+.++. .+|
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~ 92 (338)
T cd08254 14 LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAV-IPC 92 (338)
T ss_pred eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCC-CCC
Confidence 67788888999999999999999999999988877654 3345778999999999999999999999999988775 489
Q ss_pred CCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCC
Q 019199 101 RDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180 (344)
Q Consensus 101 ~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 180 (344)
+.|.+|..++.+.|....+. |....|++++|+.++.+.++++|++++..+++.++..+.|||+++.....+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~ 165 (338)
T cd08254 93 GACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKP 165 (338)
T ss_pred CCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCC
Confidence 99999999999999654322 22346899999999999999999999999999999999999999988888899
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh-cCCccEEEECCCCch
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-GKSLDFIIDTASGDH 256 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~-~~~~dvvid~~g~~~ 256 (344)
+++|||.|+|.+|++++++|+.+|++|++++.++++.+.+ +++|.+.+++..+... +... .+++|+++|+++...
T Consensus 166 ~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~ 244 (338)
T cd08254 166 GETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELA-KELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQP 244 (338)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHH
Confidence 9999998889999999999999999999999999988888 6799888887665322 2122 367999999998776
Q ss_pred hHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccHHHHHHH
Q 019199 257 PFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALER 325 (344)
Q Consensus 257 ~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~ 325 (344)
.+..++++++++|+++.+|.. ....++...+. ....+.++.+++++.++.+.+.++.++++++.++++.
T Consensus 245 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~ 324 (338)
T cd08254 245 TFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQVETRPLDEIPEVLER 324 (338)
T ss_pred HHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcccceeEcHHHHHHHHHH
Confidence 799999999999999999865 22222221111 1125678899999999999876789999999999999
Q ss_pred HHcCCcceEEEEEe
Q 019199 326 LIKRDVKYRFVIDI 339 (344)
Q Consensus 326 ~~~~~~~gkvvi~~ 339 (344)
+.+++..||+|+++
T Consensus 325 ~~~~~~~~kvv~~~ 338 (338)
T cd08254 325 LHKGKVKGRVVLVP 338 (338)
T ss_pred HHcCCccceEEEeC
Confidence 99999899999863
No 57
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=8.3e-38 Score=290.89 Aligned_cols=324 Identities=27% Similarity=0.459 Sum_probs=262.0
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC---CCCC
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR---FKVG 88 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~---~~~G 88 (344)
+|+.......+++.+.+.|.+.++||+||+.++++|++|+....+..+ ..+|.++|||++|+|+.+|+++++ |++|
T Consensus 3 a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~-~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~G 81 (367)
T cd08263 3 AAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP-FPPPFVLGHEISGEVVEVGPNVENPYGLSVG 81 (367)
T ss_pred eEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC-CCCCcccccccceEEEEeCCCCCCCCcCCCC
Confidence 455544445678889999999999999999999999999988877664 356789999999999999999988 9999
Q ss_pred CEEEEeccccCCCCCccccCCCCCCCCcccc-cc-ccccCCC-------------CccCCcceeEEEEecceEEEcCCCC
Q 019199 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVY-TF-NAIDADG-------------TITKGGYSSYIVVHERYCYKIANDY 153 (344)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~-~~-~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~P~~~ 153 (344)
|+|+..+.. .|+.|.+|..+..++|+++.+ .. ++..+.| ....|++++|+.++.+.++++|+++
T Consensus 82 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~i 160 (367)
T cd08263 82 DRVVGSFIM-PCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESL 160 (367)
T ss_pred CEEEEcCCC-CCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCCC
Confidence 999875443 899999999999999998641 11 1000100 0235899999999999999999999
Q ss_pred CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVS 232 (344)
Q Consensus 154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~ 232 (344)
+..+++.+++.+.|||+++.....++++++|||+|+|.+|++++++|+.+|++ |++++.++++.+.+ +++|++.+++.
T Consensus 161 s~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~-~~~g~~~v~~~ 239 (367)
T cd08263 161 DYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKA-KELGATHTVNA 239 (367)
T ss_pred CHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCceEecC
Confidence 99999999999999999998888779999999998899999999999999997 88888888888777 68999999987
Q ss_pred CCHHHH---HHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCcee-----e-e-----echH
Q 019199 233 SDLEQM---KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASL-----N-I-----GGTK 293 (344)
Q Consensus 233 ~~~~~~---~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~-----~-~-----~~~~ 293 (344)
+..+.. .+. .+++|++||++++......++++++++|+++.+|... ...+....+ . . ...+
T Consensus 240 ~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (367)
T cd08263 240 AKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPRQ 319 (367)
T ss_pred CcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCCcHH
Confidence 654332 222 2579999999998745899999999999999998641 122221111 0 1 1136
Q ss_pred hHHHHHHHHHhCCCccc---eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 294 DTQEMLEYCAAHKIYPQ---IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 294 ~~~~~~~~~~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
.++++++++.++.+++. .+.|+++++.++++.+.+++..||+||+
T Consensus 320 ~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 320 DLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred HHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 78999999999999763 4789999999999999999888999974
No 58
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=8.7e-38 Score=287.97 Aligned_cols=317 Identities=22% Similarity=0.345 Sum_probs=248.6
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC---CCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
++|...++++.+++.+.+.|.|+++||+||+.++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~ 81 (341)
T PRK05396 2 KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV 81 (341)
T ss_pred ceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCC
Confidence 355555566779999999999999999999999999999998765532 12346778999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t 167 (344)
||+|+..+.+ .|++|.+|..+.+++|++..+. +....|+|++|+.++.+.++++|+++++.+++.+ ..+.+
T Consensus 82 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~ 152 (341)
T PRK05396 82 GDRVSGEGHI-VCGHCRNCRAGRRHLCRNTKGV-------GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGN 152 (341)
T ss_pred CCEEEECCCC-CCCCChhhhCcChhhCCCccee-------eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHH
Confidence 9999887655 7999999999999999874221 1224689999999999999999999999888744 45555
Q ss_pred hHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc-
Q 019199 168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG- 242 (344)
Q Consensus 168 a~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~- 242 (344)
++.++.. . ..+|++|+|.|+|.+|++++++|+.+|+ +|++++.++++.+.+ +++|++.+++.++.+. +.+..
T Consensus 153 ~~~~~~~-~-~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~ 229 (341)
T PRK05396 153 AVHTALS-F-DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELA-RKMGATRAVNVAKEDLRDVMAELGM 229 (341)
T ss_pred HHHHHHc-C-CCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCcEEecCccccHHHHHHHhcC
Confidence 5555433 2 3689999998889999999999999999 688887777777766 6899999888765433 33332
Q ss_pred -CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee------ee-----chHhHHHHHHHHHhC-CCc
Q 019199 243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN------IG-----GTKDTQEMLEYCAAH-KIY 308 (344)
Q Consensus 243 -~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~g-~~~ 308 (344)
+++|++||+.|+...+..++++++++|+++.+|.. ....++...+. .+ ..+.+..+++++.++ ++.
T Consensus 230 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (341)
T PRK05396 230 TEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLS 309 (341)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChh
Confidence 67999999999877799999999999999999865 22221111110 11 123456788899888 454
Q ss_pred cc-eEEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199 309 PQ-IETIPIENVNEALERLIKRDVKYRFVIDIQ 340 (344)
Q Consensus 309 ~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 340 (344)
+. .+.|+++++.++++.+.+++ .||++++++
T Consensus 310 ~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 310 PIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred HheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 44 48999999999999998877 799999764
No 59
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=5.5e-38 Score=289.72 Aligned_cols=283 Identities=16% Similarity=0.146 Sum_probs=223.9
Q ss_pred CCCccceeeccCCCC-CCcEEEEEeeeecccchhhhhcCC---CCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199 19 SGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTRNK---HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~---~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~ 94 (344)
++.+++.+.+.|+|. +|||||||.|+|||+.|....... .....+|.++|||++|+|+++|+++++|++||+|+..
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 345777888999875 999999999999999996443211 1123467889999999999999999999999999631
Q ss_pred ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccc----ccccchhhhHhHH
Q 019199 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLAL----AAPLLCAGITVYT 170 (344)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~----aa~l~~~~~ta~~ 170 (344)
.++|+||+.++++.++++|+++++.+ +++++.++.|||+
T Consensus 100 -------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~ 142 (345)
T cd08293 100 -------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALI 142 (345)
T ss_pred -------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHH
Confidence 14699999999999999999865433 4567788999999
Q ss_pred HHHhccCCCCC--CEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh-c
Q 019199 171 PMMRHKMNQPG--KSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-G 242 (344)
Q Consensus 171 ~l~~~~~~~~g--~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~-~ 242 (344)
++.+...+++| ++|||+|+ |++|++++|+|+++|+ +|+++++++++.+.+.+++|+++++++.+.+. +.+. .
T Consensus 143 al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~ 222 (345)
T cd08293 143 GIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP 222 (345)
T ss_pred HHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC
Confidence 98777766776 99999998 9999999999999999 89999999998888855599999998876433 3333 3
Q ss_pred CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC----Cccc----cC--------Cceee---e--ec-----hHhHH
Q 019199 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP----SKVK----FS--------PASLN---I--GG-----TKDTQ 296 (344)
Q Consensus 243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~----~~~~----~~--------~~~~~---~--~~-----~~~~~ 296 (344)
+++|++||++|+.. +..++++++++|+++.+|.. .... +. ...+. . .. .+.++
T Consensus 223 ~gvd~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T cd08293 223 EGVDVYFDNVGGEI-SDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIA 301 (345)
T ss_pred CCceEEEECCCcHH-HHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHH
Confidence 68999999999876 89999999999999999842 1111 10 00000 0 11 13467
Q ss_pred HHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 297 EMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 297 ~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++++++.++.+++.. ..|+++++++|++.+.+++..||+|+++
T Consensus 302 ~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 302 QLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 788999999998765 5669999999999999998889999875
No 60
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.8e-38 Score=288.91 Aligned_cols=284 Identities=22% Similarity=0.229 Sum_probs=226.7
Q ss_pred CCccceee---ccCC-CCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCccc--ccceEEEEecCCCCCCCCCCEEEE
Q 019199 20 GVLSPYSF---NRRA-VGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH--EIVGIVKEVGHNVSRFKVGDHVGV 93 (344)
Q Consensus 20 ~~~~~~~~---~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G~V~~~G~~~~~~~~Gd~V~~ 93 (344)
+.|++.+. +.|. +++||||||+.|+++|+.|.....+.......|.++|+ |++|+|..+|+++++|++||+|+.
T Consensus 25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~ 104 (348)
T PLN03154 25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG 104 (348)
T ss_pred ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEe
Confidence 44666553 4453 58999999999999999987654332222235788998 889999999999999999999952
Q ss_pred eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce--EEE--cCCCCCcc-cccccchhhhHh
Q 019199 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY--CYK--IANDYPLA-LAAPLLCAGITV 168 (344)
Q Consensus 94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~--~P~~~~~~-~aa~l~~~~~ta 168 (344)
.|+|+||..++... +++ +|+++++. +++++++++.||
T Consensus 105 --------------------------------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA 146 (348)
T PLN03154 105 --------------------------------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTA 146 (348)
T ss_pred --------------------------------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHH
Confidence 25799999998753 544 58999986 688999999999
Q ss_pred HHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-H---HHHHh-c
Q 019199 169 YTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-E---QMKAL-G 242 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~---~~~~~-~ 242 (344)
|+++.....+++|++|||+|+ |++|++++|+||.+|++|+++++++++.+.+++++|+++++++.+. + .+.+. .
T Consensus 147 ~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~ 226 (348)
T PLN03154 147 YAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP 226 (348)
T ss_pred HHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC
Confidence 999987777799999999998 9999999999999999999999998888887447999999987642 2 22333 3
Q ss_pred CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccc-----cCCceee------ee---------chHhHHHHHH
Q 019199 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVK-----FSPASLN------IG---------GTKDTQEMLE 300 (344)
Q Consensus 243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~-----~~~~~~~------~~---------~~~~~~~~~~ 300 (344)
+++|++||++|+. .+..++++++++|+++.+|... ... ++...+. .+ ..+.++++++
T Consensus 227 ~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~ 305 (348)
T PLN03154 227 EGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSR 305 (348)
T ss_pred CCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHH
Confidence 5799999999986 5999999999999999999752 111 1111111 11 1245788999
Q ss_pred HHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199 301 YCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS 342 (344)
Q Consensus 301 ~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 342 (344)
++++|++++.+ .+|+|+++++|++.+.+++..||+||++.++
T Consensus 306 l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 306 YYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred HHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 99999999877 6899999999999999999999999998653
No 61
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.3e-37 Score=287.17 Aligned_cols=317 Identities=25% Similarity=0.338 Sum_probs=254.0
Q ss_pred eeeecCCCCCccceeeccCCCC-CCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+|+.. ++..++++++++|+|. ++||+||+.++++|+.|+....|..+ ..+|.++|||++|+|+++|++++++++||+
T Consensus 3 a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (344)
T cd08284 3 AVVFK-GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVGDR 80 (344)
T ss_pred eEEEe-cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCCCE
Confidence 55554 3467889999999985 99999999999999999988877654 345788999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHh
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV 168 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta 168 (344)
|+..+.. .|++|.+|.++..+.|++..+. +.. ......|++++|+.++++ .++++|+++++.+++++++.+.||
T Consensus 81 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta 156 (344)
T cd08284 81 VVSPFTI-ACGECFYCRRGQSGRCAKGGLF--GYA-GSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG 156 (344)
T ss_pred EEEcccC-CCCCChHHhCcCcccCCCCccc--ccc-ccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence 9887654 7999999999999999764221 000 011235899999999965 999999999999999999999999
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH---HHHHhc--
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKALG-- 242 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~~~~~-- 242 (344)
|+++.. ..+.+|++|||+|+|.+|++++++|+.+|+ +|+++++.+++...+ +++|+. .++.+..+ .+.+..
T Consensus 157 ~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~l~~~~~~ 233 (344)
T cd08284 157 YFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERA-AALGAE-PINFEDAEPVERVREATEG 233 (344)
T ss_pred HhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-HHhCCe-EEecCCcCHHHHHHHHhCC
Confidence 999976 456899999999889999999999999997 899997777777776 679975 35554432 233332
Q ss_pred CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCc-------eee---eechHhHHHHHHHHHhCCCcc-
Q 019199 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYP- 309 (344)
Q Consensus 243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~- 309 (344)
+++|++||++++...+..++++++++|+++.+|... ....... .+. ....+.++++++++.++.+++
T Consensus 234 ~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 313 (344)
T cd08284 234 RGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLE 313 (344)
T ss_pred CCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChH
Confidence 579999999997666999999999999999998652 1111111 111 223467899999999999975
Q ss_pred --ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 310 --QIETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 310 --~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
..+.|++++++++++.+.+++. +|+|++
T Consensus 314 ~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 314 FLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred HhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 3488999999999999988877 999874
No 62
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=4.2e-37 Score=286.79 Aligned_cols=320 Identities=23% Similarity=0.253 Sum_probs=252.6
Q ss_pred eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+|+.. .++.+++++++.|.+ .++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++||+
T Consensus 3 ~~~~~-~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (375)
T cd08282 3 AVVYG-GPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGDR 80 (375)
T ss_pred eEEEe-cCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCCCE
Confidence 44443 456788999999996 899999999999999999999888665 346889999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCcccccccc--ccCC-CCccCCcceeEEEEecc--eEEEcCCCCCcc---cccccc
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNA--IDAD-GTITKGGYSSYIVVHER--YCYKIANDYPLA---LAAPLL 162 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~--~~~~-~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~---~aa~l~ 162 (344)
|+..+. ..|+.|..|..+..+.|.+..+.+.+ .+.. .....|+|++|+.++.. .++++|+++++. +++.++
T Consensus 81 V~~~~~-~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~ 159 (375)
T cd08282 81 VVVPFN-VACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLS 159 (375)
T ss_pred EEEeCC-CCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeec
Confidence 977654 47999999999999999864322111 0100 11235899999999975 899999999998 567888
Q ss_pred hhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---H
Q 019199 163 CAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---M 238 (344)
Q Consensus 163 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~ 238 (344)
+.+.|||+++ ....+++|++|+|.|+|.+|++++++|+++|+ +|+++++++++.+.+ +++|++ .++.++.+. +
T Consensus 160 ~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~i 236 (375)
T cd08282 160 DIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLA-ESIGAI-PIDFSDGDPVEQI 236 (375)
T ss_pred chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCe-EeccCcccHHHHH
Confidence 8999999998 55566999999999889999999999999998 799988888888777 689984 466654333 2
Q ss_pred HHh-cCCccEEEECCCCch-----------hHHHHHHhcccCCEEEEEcCCC--cc------------ccCCceee----
Q 019199 239 KAL-GKSLDFIIDTASGDH-----------PFDAYMSLLKVAGVYVLVGFPS--KV------------KFSPASLN---- 288 (344)
Q Consensus 239 ~~~-~~~~dvvid~~g~~~-----------~~~~~~~~l~~~G~iv~~g~~~--~~------------~~~~~~~~---- 288 (344)
.+. .+++|+++|++|+.. ++..++++++++|+++.+|... .. .++...+.
T Consensus 237 ~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (375)
T cd08282 237 LGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGL 316 (375)
T ss_pred HHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCc
Confidence 222 257999999999763 4889999999999999887641 11 01100000
Q ss_pred ------eechHhHHHHHHHHHhCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 289 ------IGGTKDTQEMLEYCAAHKIYP---QIETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 289 ------~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
....+.++++++++.++++.+ .+++|++++++++++.+.+++ .+|+|+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 317 SFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred EEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 113356788999999999986 358999999999999999988 8999875
No 63
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.2e-37 Score=285.01 Aligned_cols=315 Identities=21% Similarity=0.354 Sum_probs=251.8
Q ss_pred CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhc-CCCC--CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTR-NKHG--DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~ 94 (344)
+++.+++++.+.|+++++||+||+.++++|++|+.... +..+ ....|.++|||++|+|+++|+++++|++||+|+..
T Consensus 5 ~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~ 84 (339)
T cd08232 5 AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVN 84 (339)
T ss_pred cCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEc
Confidence 56788999999999999999999999999999987663 3221 12457789999999999999999999999999876
Q ss_pred ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174 (344)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~ 174 (344)
+.+ .|++|.+|..|+.+.|.+..+ +.... .-....|+|++|+.++++.++++|++++..+|+. ..++.+||+++..
T Consensus 85 ~~~-~~~~~~~~~~g~~~~~~~~~~-~~~~~-~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~ 160 (339)
T cd08232 85 PSR-PCGTCDYCRAGRPNLCLNMRF-LGSAM-RFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNR 160 (339)
T ss_pred cCC-cCCCChHHhCcCcccCccccc-eeecc-ccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHh
Confidence 554 799999999999999997421 11000 0012468999999999999999999999999875 5678899999988
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---cCCccEEEE
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSLDFIID 250 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~dvvid 250 (344)
...+ ++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|++++++.++.. ..+. .+++|+++|
T Consensus 161 ~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~-~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vld 237 (339)
T cd08232 161 AGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVA-RAMGADETVNLARDP-LAAYAADKGDFDVVFE 237 (339)
T ss_pred cCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCCEEEcCCchh-hhhhhccCCCccEEEE
Confidence 8775 99999998889999999999999999 888988888877765 688999988876543 2222 246999999
Q ss_pred CCCCchhHHHHHHhcccCCEEEEEcCCC-ccccCCc-------eee--eechHhHHHHHHHHHhCCCcc---ceEEEeCc
Q 019199 251 TASGDHPFDAYMSLLKVAGVYVLVGFPS-KVKFSPA-------SLN--IGGTKDTQEMLEYCAAHKIYP---QIETIPIE 317 (344)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~-------~~~--~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~ 317 (344)
+.++...+..++++|+++|+++.+|... ....+.. .+. ....+.++++++++.++.+++ ..++|+++
T Consensus 238 ~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 317 (339)
T cd08232 238 ASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPLE 317 (339)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEecHH
Confidence 9997656899999999999999998542 1111111 111 223467889999999998864 23789999
Q ss_pred cHHHHHHHHHcCCcceEEEEEe
Q 019199 318 NVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+++++++.+.+++..||+|+++
T Consensus 318 ~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 318 EAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHhCCCceeEEEeC
Confidence 9999999999888889999863
No 64
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=3.1e-37 Score=282.94 Aligned_cols=315 Identities=31% Similarity=0.485 Sum_probs=259.6
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
+++...+++.+.+++++.|.+.+++|+|++.++++|++|+....|..+....|.++|||++|+|+++|++++.|++||+|
T Consensus 3 a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V 82 (332)
T cd08259 3 AAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRV 82 (332)
T ss_pred EEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCCEE
Confidence 44443345678888999999999999999999999999999888866555667899999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~ 171 (344)
+..+.. .|+.|.+|..+..+.|.+. ... |....|++++|+.++...++++|+++++.+++.+++.+.|||++
T Consensus 83 ~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~ 154 (332)
T cd08259 83 ILYYYI-PCGKCEYCLSGEENLCRNR--AEY-----GEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA 154 (332)
T ss_pred EECCCC-CCcCChhhhCCCcccCCCc--ccc-----ccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence 876544 6999999999999999874 111 22346899999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HHHHHhcCCccEEE
Q 019199 172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQMKALGKSLDFII 249 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~~~dvvi 249 (344)
+.. ..+++++++||+|+ |.+|++++++++..|++|+++++++++.+.+ +.+|.+.+++..+. +.+.+. .++|+++
T Consensus 155 l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~d~v~ 231 (332)
T cd08259 155 LKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVIDGSKFSEDVKKL-GGADVVI 231 (332)
T ss_pred HHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEEecHHHHHHHHhc-cCCCEEE
Confidence 987 66799999999997 9999999999999999999999888888777 67888777765431 122222 3799999
Q ss_pred ECCCCchhHHHHHHhcccCCEEEEEcCC-Cc-cccC-------Cceee---eechHhHHHHHHHHHhCCCccce-EEEeC
Q 019199 250 DTASGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFS-------PASLN---IGGTKDTQEMLEYCAAHKIYPQI-ETIPI 316 (344)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~-------~~~~~---~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 316 (344)
+++|... ...++++++++|+++.+|.. .. ..+. ...+. ....+.++++++++.++.+++.+ ++|++
T Consensus 232 ~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 310 (332)
T cd08259 232 ELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVSL 310 (332)
T ss_pred ECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeEEEcH
Confidence 9999876 89999999999999999864 11 1111 00111 22356788999999999998755 89999
Q ss_pred ccHHHHHHHHHcCCcceEEEEE
Q 019199 317 ENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
++++++++.+.+++..||++++
T Consensus 311 ~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 311 EDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHcCCcccEEEeC
Confidence 9999999999998888999863
No 65
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.4e-37 Score=283.60 Aligned_cols=309 Identities=26% Similarity=0.423 Sum_probs=252.2
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~ 98 (344)
++.+.+.+++.|++.++||+||+.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.|++||+|+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~- 87 (337)
T cd08261 9 PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYI- 87 (337)
T ss_pred CCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCC-
Confidence 4568888999999999999999999999999998887766544567889999999999999999999999999876544
Q ss_pred CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (344)
Q Consensus 99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 178 (344)
.|+.|..|+.+.++.|.+... . +....|+|++|+.++++ ++++|+++++.+++.+ ..+.++++++ ....+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l 157 (337)
T cd08261 88 SCGECYACRKGRPNCCENLQV--L-----GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGV 157 (337)
T ss_pred CCCCChhhhCcCcccCCCCCe--e-----eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCC
Confidence 899999999999999954211 0 11235899999999999 9999999999999876 4677888887 55667
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEEEECCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvvid~~g 253 (344)
++|++|||+|+|.+|++++++|+.+|++|+++.+++++.+.+ +++|++++++..+.+. +.+.. +++|+++|++|
T Consensus 158 ~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g 236 (337)
T cd08261 158 TAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFA-RELGADDTINVGDEDVAARLRELTDGEGADVVIDATG 236 (337)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHH-HHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCC
Confidence 999999999889999999999999999999998888888877 6899999998776432 33332 46999999998
Q ss_pred CchhHHHHHHhcccCCEEEEEcCC-CccccCCc-------eee---eechHhHHHHHHHHHhCCCcc--c-eEEEeCccH
Q 019199 254 GDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYP--Q-IETIPIENV 319 (344)
Q Consensus 254 ~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~--~-~~~~~~~~~ 319 (344)
+...+..++++++++|+++.+|.. ....++.. .+. ....+.++++++++.++.+++ . +.+|+++++
T Consensus 237 ~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~ 316 (337)
T cd08261 237 NPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDV 316 (337)
T ss_pred CHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHH
Confidence 766689999999999999999855 21111111 111 122357888999999999986 4 488999999
Q ss_pred HHHHHHHHcCC-cceEEEEEe
Q 019199 320 NEALERLIKRD-VKYRFVIDI 339 (344)
Q Consensus 320 ~~a~~~~~~~~-~~gkvvi~~ 339 (344)
.++++.+.+++ ..+|+|+++
T Consensus 317 ~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 317 PEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHhcCCCceEEEEEeC
Confidence 99999999884 679999864
No 66
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=2.1e-37 Score=289.71 Aligned_cols=306 Identities=23% Similarity=0.392 Sum_probs=243.9
Q ss_pred CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC------C-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEE
Q 019199 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH------G-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93 (344)
Q Consensus 21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~ 93 (344)
.+++++++.|++++++|+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus 38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 58899999999999999999999999999988775321 1 1345789999999999999999999999999988
Q ss_pred eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCC-------Ccccccccchhhh
Q 019199 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDY-------PLALAAPLLCAGI 166 (344)
Q Consensus 94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~-------~~~~aa~l~~~~~ 166 (344)
.+. .+|+.|..|..|.++.|..... .++ ...|+|++|+.++++.++++|+++ +.. +++++.++.
T Consensus 118 ~~~-~~~~~~~~c~~~~~~~~~~~~~--~g~-----~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ 188 (384)
T cd08265 118 EEM-MWCGMCRACRSGSPNHCKNLKE--LGF-----SADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS 188 (384)
T ss_pred CCC-CCCCCChhhhCcCcccCCCcce--eee-----cCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence 765 4899999999999999986432 111 235899999999999999999864 344 556777889
Q ss_pred HhHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCH---H---HH
Q 019199 167 TVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDL---E---QM 238 (344)
Q Consensus 167 ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~---~~ 238 (344)
+||+++... ..+++|++|+|+|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|++++++.++. + .+
T Consensus 189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~~~v 267 (384)
T cd08265 189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA-KEMGADYVFNPTKMRDCLSGEKV 267 (384)
T ss_pred HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEEcccccccccHHHHH
Confidence 999998655 567999999999889999999999999999 799998888877776 68999988876632 2 22
Q ss_pred HHhc--CCccEEEECCCCc-hhHHHHHHhcccCCEEEEEcCC-CccccCCceee------e-----echHhHHHHHHHHH
Q 019199 239 KALG--KSLDFIIDTASGD-HPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN------I-----GGTKDTQEMLEYCA 303 (344)
Q Consensus 239 ~~~~--~~~dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~------~-----~~~~~~~~~~~~~~ 303 (344)
.+.. +++|+++|++|.. ..+..++++++++|+++.+|.. ....+....+. . .....++++++++.
T Consensus 268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~ 347 (384)
T cd08265 268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMA 347 (384)
T ss_pred HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHH
Confidence 3332 5799999999874 3588999999999999999865 22221111110 1 12346899999999
Q ss_pred hCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 304 AHKIYP---QIETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 304 ~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
++.+++ .++.|+++++++|++.+.++ ..+|+|+
T Consensus 348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 348 SGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred cCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 999975 34889999999999997655 4788886
No 67
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.1e-37 Score=283.52 Aligned_cols=300 Identities=29% Similarity=0.429 Sum_probs=242.2
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~ 98 (344)
.+.+++++.+.|++.++||+||+.++++|++|+....+. ....+|.++|||++|+|+++|++++.|++||+|+..+..
T Consensus 11 ~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~- 88 (325)
T cd08264 11 IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRV- 88 (325)
T ss_pred CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCc-
Confidence 356778888888899999999999999999998877542 222357789999999999999999999999999887655
Q ss_pred CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (344)
Q Consensus 99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 178 (344)
.|++|.+|..|..+.|.+..+. +....|+|++|+.++++.++++|+++++.+++.+++.+.+||+++.. ..+
T Consensus 89 ~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~ 160 (325)
T cd08264 89 FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGL 160 (325)
T ss_pred CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCC
Confidence 7999999999999999874321 11245899999999999999999999999999999999999999876 566
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HHHHHhcCCccEEEECCCCch
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~~~dvvid~~g~~~ 256 (344)
++|++|+|+|+ |.+|++++++|+.+|++|+++++ .+.+ +++|++++++.++. +.+.+..+++|+++|++|+.
T Consensus 161 ~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~-~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~- 234 (325)
T cd08264 161 GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWL-KEFGADEVVDYDEVEEKVKEITKMADVVINSLGSS- 234 (325)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHH-HHhCCCeeecchHHHHHHHHHhCCCCEEEECCCHH-
Confidence 99999999998 99999999999999999988763 3555 67899888876542 22333347899999999986
Q ss_pred hHHHHHHhcccCCEEEEEcCC--CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccHHHHHH
Q 019199 257 PFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALE 324 (344)
Q Consensus 257 ~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~ 324 (344)
.+..++++++++|+++.+|.. ....++...+. .+.++.++++++++...++ ...+.|+++++++|++
T Consensus 235 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~a~~ 313 (325)
T cd08264 235 FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV-KVWKTFKLEEAKEALK 313 (325)
T ss_pred HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCc-eeEEEEcHHHHHHHHH
Confidence 499999999999999999864 12222211111 1234678899999964442 2348899999999999
Q ss_pred HHHcCCcceEE
Q 019199 325 RLIKRDVKYRF 335 (344)
Q Consensus 325 ~~~~~~~~gkv 335 (344)
.+.+++..+|+
T Consensus 314 ~~~~~~~~~kv 324 (325)
T cd08264 314 ELFSKERDGRI 324 (325)
T ss_pred HHHcCCCcccc
Confidence 99988777775
No 68
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.9e-37 Score=283.85 Aligned_cols=310 Identities=26% Similarity=0.388 Sum_probs=248.0
Q ss_pred CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCC-CC--CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HG--DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~ 94 (344)
.++.+.+++.+.|.+.++||+||+.++++|+.|+..+.+. .+ ...+|.++|+|++|+|+++|+++++|++||+|+..
T Consensus 6 ~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 85 (343)
T cd05285 6 GPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE 85 (343)
T ss_pred cCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence 3467888999999999999999999999999998765322 11 12356789999999999999999999999999876
Q ss_pred ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174 (344)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~ 174 (344)
+. .+|++|.+|..|..++|++..+.. .....|+|++|+.++++.++++|+++++.+++.+ ..+.+|++++ .
T Consensus 86 ~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~ 156 (343)
T cd05285 86 PG-VPCRTCEFCKSGRYNLCPDMRFAA------TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R 156 (343)
T ss_pred cc-cCCCCChhHhCcCcccCcCccccc------cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence 54 499999999999999998752210 0013589999999999999999999999999866 5778899887 5
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH------HHHHhc--CCc
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE------QMKALG--KSL 245 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~------~~~~~~--~~~ 245 (344)
...+++|++|+|.|+|++|++++++|+.+|++ |+++++++++.+.+ +++|++.+++.++.+ .+.+.. +++
T Consensus 157 ~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd05285 157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KELGATHTVNVRTEDTPESAEKIAELLGGKGP 235 (343)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence 56669999999998899999999999999997 88888888888777 678999988876543 233332 569
Q ss_pred cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-------ceee--eechHhHHHHHHHHHhCCCc--cc-eE
Q 019199 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-------ASLN--IGGTKDTQEMLEYCAAHKIY--PQ-IE 312 (344)
Q Consensus 246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~g~~~--~~-~~ 312 (344)
|++||++|+...+..++++++++|+++.+|.. ....++. ..+. ....+.++++++++.++.+. +. .+
T Consensus 236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 315 (343)
T cd05285 236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITH 315 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEE
Confidence 99999999865589999999999999999865 2111111 1111 12236788899999999875 33 47
Q ss_pred EEeCccHHHHHHHHHcCC-cceEEEE
Q 019199 313 TIPIENVNEALERLIKRD-VKYRFVI 337 (344)
Q Consensus 313 ~~~~~~~~~a~~~~~~~~-~~gkvvi 337 (344)
+|+++++.+|++.+.+++ ..+|++|
T Consensus 316 ~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 316 RFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 899999999999999875 4589998
No 69
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=7.4e-37 Score=281.09 Aligned_cols=311 Identities=25% Similarity=0.396 Sum_probs=256.5
Q ss_pred CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~ 96 (344)
.+..+++.+.+.|.+.+++|+|++.++++|++|+..+.|... ...+|.++|||++|+|+.+|++++.|++||+|++.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~ 90 (342)
T cd08266 11 GPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPG 90 (342)
T ss_pred CccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccc
Confidence 445677778888889999999999999999999988877543 2345788999999999999999999999999987765
Q ss_pred ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (344)
Q Consensus 97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~ 176 (344)
. .|++|.+|.++.++.|+... +. |....|++++|+.++++.++++|+++++.+++.+++.+.+|++++....
T Consensus 91 ~-~~~~~~~~~~~~~~~~~~~~--~~-----g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~ 162 (342)
T cd08266 91 I-SCGRCEYCLAGRENLCAQYG--IL-----GEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRA 162 (342)
T ss_pred c-ccccchhhcccccccccccc--cc-----ccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhc
Confidence 4 69999999999999998742 21 2234688999999999999999999999999999999999999987777
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---h--cCCccEEEE
Q 019199 177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---L--GKSLDFIID 250 (344)
Q Consensus 177 ~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~--~~~~dvvid 250 (344)
.+.++++++|+|+ +.+|++++++++..|++|+++++++++.+.+ +.++.+.+++..+.+.... . .+++|++++
T Consensus 163 ~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 241 (342)
T cd08266 163 RLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADYVIDYRKEDFVREVRELTGKRGVDVVVE 241 (342)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEE
Confidence 7799999999998 7999999999999999999999998888887 5788877777665443222 2 257999999
Q ss_pred CCCCchhHHHHHHhcccCCEEEEEcCCCc--cccCCc-------eee---eechHhHHHHHHHHHhCCCccce-EEEeCc
Q 019199 251 TASGDHPFDAYMSLLKVAGVYVLVGFPSK--VKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYPQI-ETIPIE 317 (344)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~ 317 (344)
++|... +..++++++++|+++.+|.... ..++.. .+. ......+.++++++.++.+++.. +.|+++
T Consensus 242 ~~g~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 320 (342)
T cd08266 242 HVGAAT-WEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPVIDSVFPLE 320 (342)
T ss_pred CCcHHH-HHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccceeeeEcHH
Confidence 999865 8999999999999999986521 111110 011 22345788899999999988754 899999
Q ss_pred cHHHHHHHHHcCCcceEEEEE
Q 019199 318 NVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+++++++.+.+++..+|++++
T Consensus 321 ~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 321 EAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred HHHHHHHHHHhCCCCceEEEe
Confidence 999999999988878999986
No 70
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=8.6e-37 Score=281.52 Aligned_cols=313 Identities=27% Similarity=0.408 Sum_probs=255.0
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
+|... ..+.+.+++.+.|++.+++|+||+.++++|+.|+....+.......|.++|+|++|+|+++|++++.|++||+|
T Consensus 3 ~~~~~-~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V 81 (343)
T cd08235 3 AAVLH-GPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRV 81 (343)
T ss_pred EEEEe-cCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCEE
Confidence 44443 34568888999999999999999999999999998887765333457789999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce-----EEEcCCCCCcccccccchhhh
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY-----CYKIANDYPLALAAPLLCAGI 166 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~P~~~~~~~aa~l~~~~~ 166 (344)
+..+.. .|++|..|..++.++|+.+.+. +....|+|++|+.++++. ++++|+++++.+++.+ ..+.
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ 152 (343)
T cd08235 82 FVAPHV-PCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA 152 (343)
T ss_pred EEccCC-CCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence 887643 7889999999999999886432 112458999999999998 9999999999999765 7888
Q ss_pred HhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hhc
Q 019199 167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---ALG 242 (344)
Q Consensus 167 ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~ 242 (344)
+|++++... .+++|++|+|+|+|.+|++++++|+..|++ |+++++++++.+.+ +++|.++++++++.+... +..
T Consensus 153 ~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~ 230 (343)
T cd08235 153 CCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKVRELT 230 (343)
T ss_pred HHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEecCCccCHHHHHHHHh
Confidence 999999766 679999999998899999999999999998 88888888888877 688998888877654322 222
Q ss_pred --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCC-------ceee---eechHhHHHHHHHHHhCCC
Q 019199 243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSP-------ASLN---IGGTKDTQEMLEYCAAHKI 307 (344)
Q Consensus 243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~-------~~~~---~~~~~~~~~~~~~~~~g~~ 307 (344)
+++|+++|++++...+..++++++++|+++.+|.. . ...++. ..+. ....+.++++++++.++.+
T Consensus 231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l 310 (343)
T cd08235 231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKI 310 (343)
T ss_pred CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCC
Confidence 56999999999765689999999999999999854 1 111111 1111 2234678889999999998
Q ss_pred cc--c-eEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 308 YP--Q-IETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 308 ~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
++ . ..+|+++++.++++.+.+++ .+|+|+
T Consensus 311 ~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi 342 (343)
T cd08235 311 DVKDLITHRFPLEDIEEAFELAADGK-SLKIVI 342 (343)
T ss_pred ChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence 63 3 47899999999999999998 899986
No 71
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=6.7e-37 Score=279.51 Aligned_cols=306 Identities=20% Similarity=0.310 Sum_probs=243.4
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+++.+.+ ++.+++++++.|+++++||+||+.++++|++|.....|..+ +|.++|||++|+|+++|++ +++||+
T Consensus 2 ~a~~~~~-~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~~ 74 (319)
T cd08242 2 KALVLDG-GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGKR 74 (319)
T ss_pred eeEEEeC-CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCCe
Confidence 3555543 56789999999999999999999999999999988877553 5778999999999999987 689999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 170 (344)
|...+.. .|+.|.+|..|.++.|...... +. ....|++++|+.++.++++++|++++..+++.+ ....+++.
T Consensus 75 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~ 146 (319)
T cd08242 75 VVGEINI-ACGRCEYCRRGLYTHCPNRTVL--GI----VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE 146 (319)
T ss_pred EEECCCc-CCCCChhhhCcCcccCCCCccc--Cc----cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence 9776655 6999999999999888864211 10 013589999999999999999999999888753 34556666
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid 250 (344)
.+ +...+++|++|||+|+|.+|++++|+|+.+|++|++++.++++.+.+ +++|++.+++..+. ...+++|+++|
T Consensus 147 ~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~----~~~~~~d~vid 220 (319)
T cd08242 147 IL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALA-RRLGVETVLPDEAE----SEGGGFDVVVE 220 (319)
T ss_pred HH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEeCcccc----ccCCCCCEEEE
Confidence 55 45556999999999889999999999999999999999999998888 56999888776542 12357999999
Q ss_pred CCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee------ee-chHhHHHHHHHHHhCCCc--cce-EEEeCccH
Q 019199 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN------IG-GTKDTQEMLEYCAAHKIY--PQI-ETIPIENV 319 (344)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~------~~-~~~~~~~~~~~~~~g~~~--~~~-~~~~~~~~ 319 (344)
++|+...+..++++++++|+++..+.. ....++...+. .+ ....++++++++.+++++ +.+ +.|+++++
T Consensus 221 ~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 300 (319)
T cd08242 221 ATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEA 300 (319)
T ss_pred CCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHH
Confidence 999866689999999999999987654 22222211111 11 112488899999999994 444 89999999
Q ss_pred HHHHHHHHcCCcceEEEEE
Q 019199 320 NEALERLIKRDVKYRFVID 338 (344)
Q Consensus 320 ~~a~~~~~~~~~~gkvvi~ 338 (344)
++||+.+.++. .+|++|+
T Consensus 301 ~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 301 LEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred HHHHHHHhcCC-ceEEEeC
Confidence 99999998766 5899875
No 72
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=3.8e-37 Score=281.56 Aligned_cols=280 Identities=20% Similarity=0.279 Sum_probs=233.1
Q ss_pred CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (344)
Q Consensus 21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~ 99 (344)
.+++.+++.|.+.++||+||+.++++|++|+..+.|..+ ...+|.++|||++|+|+++|++++++++||+|+..+
T Consensus 15 ~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~---- 90 (324)
T cd08292 15 VLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAP---- 90 (324)
T ss_pred eEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecc----
Confidence 478899999999999999999999999999988877654 344678999999999999999999999999997532
Q ss_pred CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (344)
Q Consensus 100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 179 (344)
..|+|++|+.+++..++++|+++++.+++.+++.+.|||+++.. ..++
T Consensus 91 -------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~ 138 (324)
T cd08292 91 -------------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVK 138 (324)
T ss_pred -------------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCC
Confidence 24899999999999999999999999999999889999998865 5669
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEECCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIIDTAS 253 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~~g 253 (344)
+|++|||+|+ |.+|++++++|+++|++++++++++++.+.+ +++|++++++.++.+.. .+.+ +++|++||++|
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g 217 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-RALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVG 217 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCC
Confidence 9999999987 9999999999999999999999888888888 46899888887765433 2333 57999999999
Q ss_pred CchhHHHHHHhcccCCEEEEEcCC--CccccCC-------ceee--ee-----------chHhHHHHHHHHHhCCCccc-
Q 019199 254 GDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSP-------ASLN--IG-----------GTKDTQEMLEYCAAHKIYPQ- 310 (344)
Q Consensus 254 ~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~-------~~~~--~~-----------~~~~~~~~~~~~~~g~~~~~- 310 (344)
+.. ...++++++++|+++.+|.. ....++. ..+. .. ..+.++++++++.++.+++.
T Consensus 218 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~ 296 (324)
T cd08292 218 GKL-AGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPV 296 (324)
T ss_pred Chh-HHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCcc
Confidence 875 89999999999999999864 1222221 1111 10 12467889999999999854
Q ss_pred eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 311 IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
.+.|+++++.+|++.+.+.+..+|++++
T Consensus 297 ~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 297 EAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred ccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 4889999999999999988778999873
No 73
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.5e-36 Score=282.17 Aligned_cols=311 Identities=23% Similarity=0.375 Sum_probs=242.3
Q ss_pred CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~ 94 (344)
.+..+++++.+.|.|.++||+||+.++++|++|+....+... ...+|.++|||++|+|+++|+++++|++||+|+..
T Consensus 25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
T PLN02702 25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE 104 (364)
T ss_pred cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence 346788888888999999999999999999999988765321 12357789999999999999999999999999876
Q ss_pred ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174 (344)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~ 174 (344)
+.. +|++|..|.+|..+.|++..+. + .....|+|++|+.++...++++|+++++.+++.. ..+.++++++ .
T Consensus 105 ~~~-~~~~c~~c~~g~~~~c~~~~~~--~----~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~ 175 (364)
T PLN02702 105 PGI-SCWRCNLCKEGRYNLCPEMKFF--A----TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-R 175 (364)
T ss_pred CCC-CCCCCcchhCcCcccCCCcccc--C----CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 665 8999999999999999874321 1 0123589999999999999999999999888742 2344577777 4
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCC--CH---HHHHHh----cCC
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSS--DL---EQMKAL----GKS 244 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~--~~---~~~~~~----~~~ 244 (344)
...+.+|++|+|+|+|++|++++++|+.+|++ |+++++++++.+.+ +++|++.+++.. .. +.+.+. .++
T Consensus 176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T PLN02702 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVA-KQLGADEIVLVSTNIEDVESEVEEIQKAMGGG 254 (364)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence 55568999999998899999999999999995 67777777777766 689998877643 12 222222 257
Q ss_pred ccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-------ceee--eechHhHHHHHHHHHhCCCc--cc-e
Q 019199 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-------ASLN--IGGTKDTQEMLEYCAAHKIY--PQ-I 311 (344)
Q Consensus 245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~g~~~--~~-~ 311 (344)
+|++||++|+...+..++++++++|+++.+|.. ....+.. ..+. +.....++.+++++.++.+. +. .
T Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 334 (364)
T PLN02702 255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLIT 334 (364)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchHheE
Confidence 999999999766799999999999999999854 2111111 1111 22235788899999999885 33 3
Q ss_pred EEEeC--ccHHHHHHHHHcCCcceEEEEE
Q 019199 312 ETIPI--ENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 312 ~~~~~--~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
++|++ +++++|++.+.+++..+|+++.
T Consensus 335 ~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 335 HRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred EEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 77665 7999999999988878999985
No 74
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.2e-36 Score=280.31 Aligned_cols=304 Identities=23% Similarity=0.303 Sum_probs=240.7
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-----------CCCCCCCcccccceEEEEecC
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-----------DSKYPLVPGHEIVGIVKEVGH 80 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~~G~ 80 (344)
+++...+ .+++++++.|++.+++|+||+.++++|+.|+....|... ...+|.++|||++|+|+++|+
T Consensus 3 a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08262 3 AAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGP 80 (341)
T ss_pred eEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCC
Confidence 4444333 788889999999999999999999999999988876221 223578899999999999999
Q ss_pred CCCC-CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccccc
Q 019199 81 NVSR-FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAA 159 (344)
Q Consensus 81 ~~~~-~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa 159 (344)
.+++ |++||+|+..+. ..|+.|..|..|... ...|+|++|+.++.+.++++|+++++.+++
T Consensus 81 ~v~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~-----------------~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~ 142 (341)
T cd08262 81 GTERKLKVGTRVTSLPL-LLCGQGASCGIGLSP-----------------EAPGGYAEYMLLSEALLLRVPDGLSMEDAA 142 (341)
T ss_pred CCcCCCCCCCEEEecCC-cCCCCChhhhCCCCc-----------------CCCCceeeeEEechHHeEECCCCCCHHHhh
Confidence 9987 999999988765 479999999433211 235899999999999999999999999876
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHH-
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ- 237 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~- 237 (344)
++..+.+||+++ ...++++|++|||+|+|++|++++|+|+.+|++ ++++++++++.+.+ +++|++++++.+..+.
T Consensus 143 -~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~ 219 (341)
T cd08262 143 -LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALA-LAMGADIVVDPAADSPF 219 (341)
T ss_pred -hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEEcCCCcCHH
Confidence 667888999986 556669999999998899999999999999996 66666677777766 6899988888654311
Q ss_pred -----HHH-h-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-------ceee---eechHhHHHHH
Q 019199 238 -----MKA-L-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-------ASLN---IGGTKDTQEML 299 (344)
Q Consensus 238 -----~~~-~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-------~~~~---~~~~~~~~~~~ 299 (344)
..+ . .+++|+++|++|+...+..++++++++|+++.+|.. ....+.. ..+. ....+.+.+++
T Consensus 220 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (341)
T cd08262 220 AAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADAL 299 (341)
T ss_pred HHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHH
Confidence 111 2 257999999998854589999999999999999865 1111111 1111 12335788999
Q ss_pred HHHHhCCCcc--c-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 300 EYCAAHKIYP--Q-IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 300 ~~~~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+++.++.+.+ . .+.|++++++++++.+.+++..||+|++
T Consensus 300 ~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 300 DALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 9999999975 2 4889999999999999999988999974
No 75
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.9e-36 Score=278.29 Aligned_cols=314 Identities=22% Similarity=0.320 Sum_probs=248.3
Q ss_pred eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
++.+. .++.+++.+.+.|.| +++||+||+.++++|++|+..+.|..+ ...|.++|||++|+|+++|+++..+++||+
T Consensus 3 ~~~~~-~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (345)
T cd08287 3 ATVIH-GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVKPGDF 80 (345)
T ss_pred eeEEe-cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccCCCCE
Confidence 44443 455688999999996 999999999999999999888877654 245789999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCccccc-----ccch
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAA-----PLLC 163 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa-----~l~~ 163 (344)
|+.. ....|+.|.+|..|..+.|.+..+. +....|+|++|+.++.+ .++++|+++++..+. ++..
T Consensus 81 V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~ 152 (345)
T cd08287 81 VIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD 152 (345)
T ss_pred EEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence 9763 2346999999999999999864321 12356899999999975 899999999882221 2336
Q ss_pred hhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---H
Q 019199 164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---K 239 (344)
Q Consensus 164 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~ 239 (344)
.+.+|++++.. ..+++|++|+|.|+|.+|++++++|+.+|++ ++++++++++.+.+ +++|++.++++...... .
T Consensus 153 ~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~ga~~v~~~~~~~~~~~i~ 230 (345)
T cd08287 153 VMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALA-REFGATDIVAERGEEAVARVR 230 (345)
T ss_pred HHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCceEecCCcccHHHHHH
Confidence 78889998864 4568999999988899999999999999995 77777777777666 68999999988764433 3
Q ss_pred Hhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-ccccCCce-ee---------eechHhHHHHHHHHHhCC
Q 019199 240 ALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-KVKFSPAS-LN---------IGGTKDTQEMLEYCAAHK 306 (344)
Q Consensus 240 ~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~-~~---------~~~~~~~~~~~~~~~~g~ 306 (344)
+.. .++|+++|++|+...+..++++++++|+++.+|... ...++... +. ....+.++++++++.++.
T Consensus 231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (345)
T cd08287 231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGR 310 (345)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCC
Confidence 332 479999999998777999999999999999998652 23332211 11 122467899999999999
Q ss_pred Ccc---ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 307 IYP---QIETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 307 ~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+++ .++.|++++++++++.+.+++. .|++|+
T Consensus 311 l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 311 INPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred CCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence 986 3488999999999998887664 499885
No 76
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-36 Score=280.63 Aligned_cols=300 Identities=23% Similarity=0.351 Sum_probs=235.5
Q ss_pred CCCcccee-eccCCCCCCcEEEEEeeeecccchhhhhcCCCC--------------------CCCCCCCcccccceEEEE
Q 019199 19 SGVLSPYS-FNRRAVGSDDVSITITHCGVCYADVIWTRNKHG--------------------DSKYPLVPGHEIVGIVKE 77 (344)
Q Consensus 19 ~~~~~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~~~G~e~~G~V~~ 77 (344)
+..+.+.+ .+.|.+.+++|+||+.++++|++|+....|..+ ...+|.++|||++|+|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~ 91 (350)
T cd08274 12 LDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVA 91 (350)
T ss_pred ccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEE
Confidence 33455543 467778999999999999999999988766432 235688999999999999
Q ss_pred ecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccc
Q 019199 78 VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLAL 157 (344)
Q Consensus 78 ~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~ 157 (344)
+|+++++|++||+|+..+.. .|+.|..|.. |... +....|++++|+.++...++++|+++++.+
T Consensus 92 vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~~~----------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~ 155 (350)
T cd08274 92 VGEGVDTARIGERVLVDPSI-RDPPEDDPAD-----IDYI----------GSERDGGFAEYTVVPAENAYPVNSPLSDVE 155 (350)
T ss_pred eCCCCCCCCCCCEEEEecCc-CCCCcccccc-----cccc----------CCCCCccceEEEEecHHHceeCCCCCCHHH
Confidence 99999999999999876543 4666654321 1100 112358999999999999999999999999
Q ss_pred ccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH
Q 019199 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE 236 (344)
Q Consensus 158 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 236 (344)
++++++.+.|||+++ ....+++|++|||+|+ |.+|++++++|+.+|++|+++++++ +++.+ +++|++.+++.....
T Consensus 156 ~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~g~~~~~~~~~~~ 232 (350)
T cd08274 156 LATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RALGADTVILRDAPL 232 (350)
T ss_pred HHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-HhcCCeEEEeCCCcc
Confidence 999999999999988 4456699999999998 9999999999999999998888665 77777 689987665544322
Q ss_pred HH-HHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Cc-cccCCceee----------eechHhHHHHHHH
Q 019199 237 QM-KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSPASLN----------IGGTKDTQEMLEY 301 (344)
Q Consensus 237 ~~-~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~~~~~~----------~~~~~~~~~~~~~ 301 (344)
.. ... .+++|++||++|+.. +..++++++++|+++.+|.. .. ..++...+. ....+.+++++++
T Consensus 233 ~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (350)
T cd08274 233 LADAKALGGEPVDVVADVVGGPL-FPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRY 311 (350)
T ss_pred HHHHHhhCCCCCcEEEecCCHHH-HHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHH
Confidence 11 122 267999999999865 99999999999999999854 21 222221111 2235788999999
Q ss_pred HHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 302 CAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 302 ~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+.++++++.+ +.|++++++++++.+..++..+|+|+.
T Consensus 312 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 312 IEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred HHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence 9999998754 889999999999999988888999975
No 77
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.1e-36 Score=280.41 Aligned_cols=290 Identities=21% Similarity=0.211 Sum_probs=230.4
Q ss_pred eeeeecC-CCCCccceeecc----CCCCCCcEEEEEeeeecccchhhhhcCCCCC-CCCCCCccccc--ceEEEEecCCC
Q 019199 11 LGWAARD-PSGVLSPYSFNR----RAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEI--VGIVKEVGHNV 82 (344)
Q Consensus 11 ~~~~~~~-~~~~~~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~~G~~~ 82 (344)
++|...+ +++.|++.+.+. |+|++|||||||.|+++|+.|+....|.... ...|.++|+++ .|.+..+|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v 88 (338)
T cd08295 9 KAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGN 88 (338)
T ss_pred ecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCC
Confidence 4444432 356788888877 8899999999999999999999888775332 34577888754 45666678888
Q ss_pred CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEec-ceEEEcC-CCCCcc-ccc
Q 019199 83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKIA-NDYPLA-LAA 159 (344)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~P-~~~~~~-~aa 159 (344)
+.|++||+|+. .|+|+||+++++ ..++++| +++++. +++
T Consensus 89 ~~~~vGd~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa 130 (338)
T cd08295 89 PDFKVGDLVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLG 130 (338)
T ss_pred CCCCCCCEEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHH
Confidence 89999999952 257999999999 7999995 678886 788
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQ 237 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~ 237 (344)
++++++.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+.+.+|+++++++.+. +.
T Consensus 131 ~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~ 210 (338)
T cd08295 131 LLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDL 210 (338)
T ss_pred hcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccH
Confidence 999999999999987777899999999998 9999999999999999999999999988888433999999986432 22
Q ss_pred ---HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccc-------cCCc-------eee---eec-----
Q 019199 238 ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVK-------FSPA-------SLN---IGG----- 291 (344)
Q Consensus 238 ---~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-------~~~~-------~~~---~~~----- 291 (344)
+.+. .+++|++||++|+. .+..++++++++|+++.+|...... .+.. .+. ...
T Consensus 211 ~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 289 (338)
T cd08295 211 DAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRY 289 (338)
T ss_pred HHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHH
Confidence 2222 36899999999985 4999999999999999998641110 0100 110 111
Q ss_pred hHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 292 TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
.+.++++++++.+|.+++.+ ..|+++++++|++.+.+++..||+|+++
T Consensus 290 ~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 290 PEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 13467889999999998765 6799999999999999998899999874
No 78
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=7.3e-37 Score=280.00 Aligned_cols=275 Identities=17% Similarity=0.193 Sum_probs=223.9
Q ss_pred CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccc
Q 019199 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~ 97 (344)
.++.+++.+.+.|+|++|||||||.|+++|+.+.. |.......|.++|+|++|+|++.| ++|++||+|+..
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~---~~~~~GdrV~~~--- 85 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKN---VALPKGTIVLAS--- 85 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCC---CCCCCCCEEEEe---
Confidence 45678888999999999999999999999997653 322222346799999999999977 469999999631
Q ss_pred cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEc----CCCCCcccc-cccchhhhHhHHHH
Q 019199 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI----ANDYPLALA-APLLCAGITVYTPM 172 (344)
Q Consensus 98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----P~~~~~~~a-a~l~~~~~ta~~~l 172 (344)
++|++|+.++.+.++++ |+++++.++ +++++++.|||+++
T Consensus 86 -----------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l 130 (325)
T TIGR02825 86 -----------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGL 130 (325)
T ss_pred -----------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHH
Confidence 35899999999888877 899999987 68999999999998
Q ss_pred HhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH----HHHHhc-CCcc
Q 019199 173 MRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE----QMKALG-KSLD 246 (344)
Q Consensus 173 ~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~----~~~~~~-~~~d 246 (344)
.+...+++|++|||+|+ |++|++++|+||.+|++|+++++++++.+.+ +++|++.++++++.+ .+.... +++|
T Consensus 131 ~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~~gvd 209 (325)
T TIGR02825 131 LEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASPDGYD 209 (325)
T ss_pred HHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeccccccHHHHHHHhCCCCeE
Confidence 77777899999999996 9999999999999999999999999998888 689999999876532 222232 5799
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCCCc----cccCC-----------ceee--ee-c------hHhHHHHHHHH
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK----VKFSP-----------ASLN--IG-G------TKDTQEMLEYC 302 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~----~~~~~-----------~~~~--~~-~------~~~~~~~~~~~ 302 (344)
++||++|+.. +..++++++++|+++.+|.... ...+. ..+. .. . .+.++++++++
T Consensus 210 vv~d~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 288 (325)
T TIGR02825 210 CYFDNVGGEF-SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWV 288 (325)
T ss_pred EEEECCCHHH-HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHH
Confidence 9999999876 8999999999999999986410 11111 0111 10 1 24678899999
Q ss_pred HhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 303 AAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 303 ~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
.+|++++.+ ..|+++++++|++.+.+++..||+|+.
T Consensus 289 ~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 289 LEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 999998765 789999999999999999988999973
No 79
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=259.57 Aligned_cols=283 Identities=18% Similarity=0.168 Sum_probs=228.9
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEec--CCCCCCCCCCEEEEecc
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG--HNVSRFKVGDHVGVGTY 96 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G--~~~~~~~~Gd~V~~~~~ 96 (344)
.++|++++.++|+|++||||+|+.|.+++|.-...+. ..+.-..|.-+|-..+|.++... |+...|++||.|+.
T Consensus 24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~-d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~--- 99 (340)
T COG2130 24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMS-DAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG--- 99 (340)
T ss_pred CCCceeEeccCCCCCcCceEEEEEEeccCHHHeeccc-CCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe---
Confidence 4679999999999999999999999999984433222 22222235566666655544433 56778999999963
Q ss_pred ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc--cccchhhhHhHHHHHh
Q 019199 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA--APLLCAGITVYTPMMR 174 (344)
Q Consensus 97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a--a~l~~~~~ta~~~l~~ 174 (344)
..+|++|.+++.+.+.|++++.-...+ ..+..+..|||.+|.+
T Consensus 100 -----------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~ 144 (340)
T COG2130 100 -----------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLD 144 (340)
T ss_pred -----------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHH
Confidence 357999999999999999966544444 3788899999999999
Q ss_pred ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh----cCCccEEE
Q 019199 175 HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL----GKSLDFII 249 (344)
Q Consensus 175 ~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~dvvi 249 (344)
.+..++|++|+|-+| |++|..+.|+||..|+||+.++.++++.+.+.+++|+|.++|++.++....+ .+|+|+.|
T Consensus 145 igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyf 224 (340)
T COG2130 145 IGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYF 224 (340)
T ss_pred hcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEE
Confidence 999999999999987 9999999999999999999999999999999777999999999987654433 48999999
Q ss_pred ECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCceee--------------ee-------chHhHHHHHHHHHhC
Q 019199 250 DTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLN--------------IG-------GTKDTQEMLEYCAAH 305 (344)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~~--------------~~-------~~~~~~~~~~~~~~g 305 (344)
|++|++. +...+..|+..+|++.||.- .+...+..+-. .. ..+.++++.+|+++|
T Consensus 225 eNVGg~v-~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~G 303 (340)
T COG2130 225 ENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEG 303 (340)
T ss_pred EcCCchH-HHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcC
Confidence 9999997 99999999999999999965 22212211111 11 125678899999999
Q ss_pred CCccceEEE-eCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199 306 KIYPQIETI-PIENVNEALERLIKRDVKYRFVIDIQN 341 (344)
Q Consensus 306 ~~~~~~~~~-~~~~~~~a~~~~~~~~~~gkvvi~~~~ 341 (344)
+|+....++ .+|++++||..|.+++++||+|+++.+
T Consensus 304 Ki~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 304 KIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred ceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 999877544 799999999999999999999999863
No 80
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.4e-36 Score=276.62 Aligned_cols=314 Identities=23% Similarity=0.325 Sum_probs=246.8
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC---CCCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G 88 (344)
++.....+..+.+.+.+.|.|.++|++||+.++++|+.|+..+.+.. .....|.++|||++|+|+.+|++++.+++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 82 (341)
T cd05281 3 AIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVG 82 (341)
T ss_pred ceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCC
Confidence 45554444578899999999999999999999999999988754421 122356789999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHh
Q 019199 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV 168 (344)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta 168 (344)
|+|+..+.. .|+.|.+|+.++++.|+.. .+.+. ...|+|++|+.++++.++++|++++.+. ++++..+.++
T Consensus 83 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a 153 (341)
T cd05281 83 DYVSAETHI-VCGKCYQCRTGNYHVCQNT--KILGV-----DTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNA 153 (341)
T ss_pred CEEEECCcc-CCCCChHHHCcCcccCccc--ceEec-----cCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHH
Confidence 999887554 8999999999999999753 23332 2458999999999999999999999854 4566777888
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH--HHHhc--C
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ--MKALG--K 243 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--~~~~~--~ 243 (344)
++++. . ..++|++|+|.|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|++++++.+..+. +.+.. +
T Consensus 154 ~~~~~-~-~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (341)
T cd05281 154 VHTVL-A-GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELA-KKMGADVVINPREEDVVEVKSVTDGT 230 (341)
T ss_pred HHHHH-h-cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCcceeeCcccccHHHHHHHcCCC
Confidence 88765 3 33789999998889999999999999999 788887777777766 6899988887654332 23322 5
Q ss_pred CccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC--------ceee----eechHhHHHHHHHHHhCCCcc-
Q 019199 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP--------ASLN----IGGTKDTQEMLEYCAAHKIYP- 309 (344)
Q Consensus 244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~--------~~~~----~~~~~~~~~~~~~~~~g~~~~- 309 (344)
++|++||++|+...+..++++|+++|+++.+|.. ....++. ..+. ....+.+.++++++.++.+++
T Consensus 231 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 310 (341)
T cd05281 231 GVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLS 310 (341)
T ss_pred CCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChh
Confidence 7999999998876689999999999999999864 2111111 1111 111356778999999999863
Q ss_pred -c-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 310 -Q-IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 310 -~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
. .+.+++++++++|+.+.+++ .||+|++
T Consensus 311 ~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 311 PVITHKLPLEDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred HheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence 3 37899999999999999988 8999975
No 81
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.1e-35 Score=274.05 Aligned_cols=313 Identities=26% Similarity=0.452 Sum_probs=251.4
Q ss_pred eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199 12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V 91 (344)
++...+ .+.+.+++.++|+++++||+||+.++++|+.|...+.+... ...|.++|+|++|+|+++|++++.|++||+|
T Consensus 3 a~~~~~-~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V 80 (343)
T cd08236 3 ALVLTG-PGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGDRV 80 (343)
T ss_pred eEEEec-CCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCCEE
Confidence 444432 34688888999999999999999999999999988776552 3457889999999999999999999999999
Q ss_pred EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199 92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171 (344)
Q Consensus 92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~ 171 (344)
+..+.. .|+.|.+|..|+++.|..+.+ . +....|+|++|+.++++.++++|+++++.+++.+ ..+.|||++
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~ 151 (343)
T cd08236 81 AVNPLL-PCGKCEYCKKGEYSLCSNYDY--I-----GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA 151 (343)
T ss_pred EEcCCC-CCCCChhHHCcChhhCCCcce--E-----ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence 876554 789999999999999987532 1 2234689999999999999999999999999877 577899999
Q ss_pred HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH--HHHHhc--CCcc
Q 019199 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKALG--KSLD 246 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~~--~~~d 246 (344)
+. ...++++++|+|+|+|.+|++++++|+.+|++ |+++++++++.+.+ +++|++.+++.++.. .+.+.. +++|
T Consensus 152 l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 229 (343)
T cd08236 152 VR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVA-RELGADDTINPKEEDVEKVRELTEGRGAD 229 (343)
T ss_pred HH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEecCccccHHHHHHHhCCCCCC
Confidence 87 44569999999998899999999999999996 99998888888777 688998888876543 222222 4699
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc----------eee---ee-----chHhHHHHHHHHHhCCC
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA----------SLN---IG-----GTKDTQEMLEYCAAHKI 307 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~----------~~~---~~-----~~~~~~~~~~~~~~g~~ 307 (344)
+++|++|....+..++++++++|+++.+|.. ....+... .+. .. ..+.++++++++.++.+
T Consensus 230 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 309 (343)
T cd08236 230 LVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKI 309 (343)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCC
Confidence 9999998766689999999999999999855 22111111 111 11 14568889999999998
Q ss_pred c--cc-eEEEeCccHHHHHHHHHc-CCcceEEEE
Q 019199 308 Y--PQ-IETIPIENVNEALERLIK-RDVKYRFVI 337 (344)
Q Consensus 308 ~--~~-~~~~~~~~~~~a~~~~~~-~~~~gkvvi 337 (344)
. +. ...+++++++++++.+.+ ....||+|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 310 KVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 6 33 378999999999999998 666688874
No 82
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1e-36 Score=273.10 Aligned_cols=249 Identities=26% Similarity=0.375 Sum_probs=199.9
Q ss_pred CcccccceEEEEecCCCC------CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccC--CCCccCCccee
Q 019199 66 VPGHEIVGIVKEVGHNVS------RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA--DGTITKGGYSS 137 (344)
Q Consensus 66 ~~G~e~~G~V~~~G~~~~------~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~--~~~~~~g~~~~ 137 (344)
++|||++|+|+++|+.++ +|++||||++.+.. .|++|.+|+.|.++.|++.... +... .+...+|+|+|
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~~~~~~G~~ae 77 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKY--GHEALDSGWPLSGGYAE 77 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhc--CcccccCCcccccccee
Confidence 589999999999999999 89999999876654 7999999999999999875321 1111 11124699999
Q ss_pred EEEEecc-eEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCch
Q 019199 138 YIVVHER-YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTS 215 (344)
Q Consensus 138 ~~~~~~~-~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~ 215 (344)
|+.+|+. .++++|+++++.+++++++.+.|+|+++.+... .+|++|||+|+|++|++++|+||.+|++ |++++++++
T Consensus 78 y~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~-~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~ 156 (280)
T TIGR03366 78 HCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGD-LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPD 156 (280)
T ss_pred eEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 9999997 699999999999999999999999999977765 6999999999999999999999999995 888888888
Q ss_pred hHHHHHHhCCCcEEEeCCCH-HHHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCCceee-
Q 019199 216 KKEEALSLLGADKFVVSSDL-EQMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPASLN- 288 (344)
Q Consensus 216 ~~~~~~~~~g~~~~v~~~~~-~~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~~~~~- 288 (344)
|++.+ +++|++.+++..+. +.+.+.+ +++|++||++|.+.+++.++++++++|+++.+|.. . ..+++...+.
T Consensus 157 r~~~a-~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~ 235 (280)
T TIGR03366 157 RRELA-LSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVR 235 (280)
T ss_pred HHHHH-HHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHh
Confidence 88887 78999998876543 2233332 57999999999888899999999999999999964 2 2233332222
Q ss_pred ---------eechHhHHHHHHHHHhC--CCc--cce-EEEeCccH
Q 019199 289 ---------IGGTKDTQEMLEYCAAH--KIY--PQI-ETIPIENV 319 (344)
Q Consensus 289 ---------~~~~~~~~~~~~~~~~g--~~~--~~~-~~~~~~~~ 319 (344)
....++++++++++.++ ++. +.+ ++||++|+
T Consensus 236 ~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 236 RWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 22346899999999985 443 333 78999864
No 83
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=7e-36 Score=273.79 Aligned_cols=274 Identities=17% Similarity=0.191 Sum_probs=220.6
Q ss_pred CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (344)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~ 99 (344)
+.+++.+.+.|+|++|||+|||.++++|+.|.....+ ...+|.++|+|++|+|++ .+++|++||+|+.
T Consensus 19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~------ 86 (329)
T cd08294 19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KNSKFPVGTIVVA------ 86 (329)
T ss_pred cceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CCCCCCCCCEEEe------
Confidence 5688889999999999999999999999987653221 124578999999999986 4567999999963
Q ss_pred CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc---eEEEcCCCCC--c---ccccccchhhhHhHHH
Q 019199 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER---YCYKIANDYP--L---ALAAPLLCAGITVYTP 171 (344)
Q Consensus 100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~P~~~~--~---~~aa~l~~~~~ta~~~ 171 (344)
.++|++|+.++.+ .++++|++++ . ..++++++++.|||++
T Consensus 87 --------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~a 134 (329)
T cd08294 87 --------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFG 134 (329)
T ss_pred --------------------------------eCCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHH
Confidence 1468999999999 9999999998 2 2234688899999999
Q ss_pred HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hh-cCCcc
Q 019199 172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---AL-GKSLD 246 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~-~~~~d 246 (344)
+.....+++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+ +++|+++++++++.+... +. .+++|
T Consensus 135 l~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l-~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd 213 (329)
T cd08294 135 LLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL-KELGFDAVFNYKTVSLEEALKEAAPDGID 213 (329)
T ss_pred HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHCCCCcE
Confidence 977777799999999986 9999999999999999999999999998888 679999999987654332 22 36799
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCC---Ccccc---CCc---------eee--e-ec-----hHhHHHHHHHHH
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKF---SPA---------SLN--I-GG-----TKDTQEMLEYCA 303 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~---~~~---------~~~--~-~~-----~~~~~~~~~~~~ 303 (344)
++||++|+.. +..++++++++|+++.+|.. ..... ..+ .+. . .. .+.++++++++.
T Consensus 214 ~vld~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 292 (329)
T cd08294 214 CYFDNVGGEF-SSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIK 292 (329)
T ss_pred EEEECCCHHH-HHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHH
Confidence 9999999854 99999999999999999853 11000 000 111 1 11 123677889999
Q ss_pred hCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 304 AHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 304 ~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++.+++.. .+|+++++++|++.+.+++..||+|+++
T Consensus 293 ~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 293 EGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred CCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 99998754 6799999999999999999899999864
No 84
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.4e-35 Score=272.37 Aligned_cols=313 Identities=27% Similarity=0.410 Sum_probs=253.6
Q ss_pred eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+++... .++.+.+.+++.|++.++||+||+.++++|+.|.....|..+. .+|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~a~~~~-~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~ 79 (334)
T cd08234 2 KALVYE-GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGDR 79 (334)
T ss_pred eeEEec-CCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 355554 3457888999999999999999999999999999888876642 36789999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 170 (344)
|+..+.. .|++|.+|..++.+.|..... . |....|++++|+.++.+.++++|+++++.+++.+ ..+.++++
T Consensus 80 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~ 150 (334)
T cd08234 80 VAVDPNI-YCGECFYCRRGRPNLCENLTA--V-----GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVH 150 (334)
T ss_pred EEEcCCc-CCCCCccccCcChhhCCCcce--e-----ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHH
Confidence 9876554 599999999999999987631 1 1124589999999999999999999999998765 67788898
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH--HHh-cCCcc
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQM--KAL-GKSLD 246 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--~~~-~~~~d 246 (344)
++ ....+++|++++|+|+|.+|++++++|+..|++ |+++++++++.+.+ +++|.+.+++....+.. +.. .+++|
T Consensus 151 ~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~vd 228 (334)
T cd08234 151 GL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA-KKLGATETVDPSREDPEAQKEDNPYGFD 228 (334)
T ss_pred HH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCeEEecCCCCCHHHHHHhcCCCCc
Confidence 88 555669999999998899999999999999997 88888888888887 68898888876543321 122 36799
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCce-------ee--eechHhHHHHHHHHHhCCCcc---ce
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPAS-------LN--IGGTKDTQEMLEYCAAHKIYP---QI 311 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~-------~~--~~~~~~~~~~~~~~~~g~~~~---~~ 311 (344)
+++|+++....+..++++++++|+++.+|... ...+..+. +. ....+.++++++++.++++++ ..
T Consensus 229 ~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 308 (334)
T cd08234 229 VVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVS 308 (334)
T ss_pred EEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEE
Confidence 99999987666899999999999999998651 22222221 11 223467889999999999874 24
Q ss_pred EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 312 ETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
.+|++++++++++.+.+ ...+|+|+
T Consensus 309 ~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 309 HRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred EEecHHHHHHHHHHHhc-CCceEEEe
Confidence 78999999999999998 77899886
No 85
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.8e-35 Score=272.44 Aligned_cols=310 Identities=22% Similarity=0.296 Sum_probs=245.2
Q ss_pred CCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC---CCCCCCCCcccccceEEEEecCCCCCCCCCCEEEE
Q 019199 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93 (344)
Q Consensus 17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~ 93 (344)
.+...+++++.++|.|.++||+||+.++++|+.|+..+.+.. ....+|.++|||++|+|+++|+++++|++||+|+.
T Consensus 6 ~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 85 (340)
T TIGR00692 6 KPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSV 85 (340)
T ss_pred cCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEE
Confidence 455668888999999999999999999999999988765431 12235678999999999999999999999999977
Q ss_pred eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHH
Q 019199 94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMM 173 (344)
Q Consensus 94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~ 173 (344)
.+. +.|++|..|..+.++.|++.+.. + ....|+|++|+.++++.++++|++++..++ +++..+.+|++++.
T Consensus 86 ~~~-~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~ 156 (340)
T TIGR00692 86 ETH-IVCGKCYACRRGQYHVCQNTKIF--G-----VDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL 156 (340)
T ss_pred CCc-CCCCCChhhhCcChhhCcCcceE--e-----ecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH
Confidence 654 48999999999999999986321 1 124589999999999999999999998554 56778888888762
Q ss_pred hccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh--cCCccE
Q 019199 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--GKSLDF 247 (344)
Q Consensus 174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~dv 247 (344)
...++|++++|.|+|++|++++++++.+|++ |+++++++++.+.+ +++|++.+++....+. +.+. .+++|+
T Consensus 157 --~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~ 233 (340)
T TIGR00692 157 --AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELA-KKMGATYVVNPFKEDVVKEVADLTDGEGVDV 233 (340)
T ss_pred --ccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEEcccccCHHHHHHHhcCCCCCCE
Confidence 3357899999988899999999999999996 88886666677666 6889988887755433 2233 257999
Q ss_pred EEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC--------ceee--e--echHhHHHHHHHHHhCCCc--cc-e
Q 019199 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP--------ASLN--I--GGTKDTQEMLEYCAAHKIY--PQ-I 311 (344)
Q Consensus 248 vid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~--------~~~~--~--~~~~~~~~~~~~~~~g~~~--~~-~ 311 (344)
++|++++...+...+++++++|+++.+|.. ....++. ..+. . ...+.+.++++++.++.++ +. +
T Consensus 234 vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 313 (340)
T TIGR00692 234 FLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIIT 313 (340)
T ss_pred EEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHhee
Confidence 999998766689999999999999999865 2111111 1111 1 1224578899999999986 33 4
Q ss_pred EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 312 ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+.++++++.++++.+.+++ .||+|+++
T Consensus 314 ~~~~l~~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 314 HKFKFDKFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred eeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence 8999999999999998877 59999864
No 86
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.1e-35 Score=273.34 Aligned_cols=289 Identities=22% Similarity=0.326 Sum_probs=234.1
Q ss_pred CCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (344)
Q Consensus 17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~ 96 (344)
+.++.++..+.|.|+|.++||+||+.++++|+.|...+.+..+...+|.++|||++|+|+++|++++.|++||+|+....
T Consensus 12 ~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 91 (336)
T TIGR02817 12 TDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD 91 (336)
T ss_pred CCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC
Confidence 44667888899999999999999999999999999888776554456889999999999999999999999999974210
Q ss_pred ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (344)
Q Consensus 97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~ 176 (344)
....|+|++|+.++++.++++|+++++.+++.+++++.|||+++....
T Consensus 92 --------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~ 139 (336)
T TIGR02817 92 --------------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL 139 (336)
T ss_pred --------------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhc
Confidence 013589999999999999999999999999999999999999987777
Q ss_pred CCCC-----CCEEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc-CCcc
Q 019199 177 MNQP-----GKSLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG-KSLD 246 (344)
Q Consensus 177 ~~~~-----g~~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~-~~~d 246 (344)
.+++ |++|||+|+ |++|++++|+|+.+ |++|+++++++++.+.+ +++|+++++++... ..+.+.. +++|
T Consensus 140 ~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~vd 218 (336)
T TIGR02817 140 GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVIDHSKPLKAQLEKLGLEAVS 218 (336)
T ss_pred CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEEECCCCHHHHHHHhcCCCCC
Confidence 6666 999999987 99999999999998 99999999998888888 68999999885431 2233333 5799
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCC-----ceee---ee------------chHhHHHHHHHHHhCC
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP-----ASLN---IG------------GTKDTQEMLEYCAAHK 306 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~-----~~~~---~~------------~~~~~~~~~~~~~~g~ 306 (344)
+++|++++......++++++++|+++.++......... ..+. .. ..+.++++++++.++.
T Consensus 219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 298 (336)
T TIGR02817 219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGK 298 (336)
T ss_pred EEEEcCCcHHHHHHHHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCC
Confidence 99999876556999999999999999886431111110 1111 00 0145788999999999
Q ss_pred Cccce-EEE---eCccHHHHHHHHHcCCcceEEEEE
Q 019199 307 IYPQI-ETI---PIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 307 ~~~~~-~~~---~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+++.+ +.+ +++++++|++.+.+++..||+++.
T Consensus 299 l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 299 IRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred eeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 98653 455 468999999999999888999875
No 87
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.8e-35 Score=270.90 Aligned_cols=296 Identities=22% Similarity=0.296 Sum_probs=243.1
Q ss_pred ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199 7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK 86 (344)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~ 86 (344)
||+.+.+...+.+..+++++++.|.|+++||+||+.++|+|++|+....|..+...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 46666666555667889999999999999999999999999999988877665455688999999999999999999999
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166 (344)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ 166 (344)
+||+|+... ...|+|++|+.++.+.++++|+++++.+++.+++...
T Consensus 81 ~Gd~V~~~~----------------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ 126 (327)
T PRK10754 81 VGDRVVYAQ----------------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL 126 (327)
T ss_pred CCCEEEECC----------------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence 999996321 1247899999999999999999999999999999999
Q ss_pred HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc
Q 019199 167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG 242 (344)
Q Consensus 167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~ 242 (344)
|||.++.....+++|++|+|+|+ |.+|++++++++.+|++|+.+++++++.+.+ +++|++++++.+..+. +.+..
T Consensus 127 ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 205 (327)
T PRK10754 127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQVINYREENIVERVKEIT 205 (327)
T ss_pred HHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEEcCCCCcHHHHHHHHc
Confidence 99999888777899999999976 9999999999999999999999999888888 6899988887765433 23332
Q ss_pred --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-c---cccCCce----ee---------eec----hHhHHHHH
Q 019199 243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-K---VKFSPAS----LN---------IGG----TKDTQEML 299 (344)
Q Consensus 243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~---~~~~~~~----~~---------~~~----~~~~~~~~ 299 (344)
+++|+++|++++.. ...++++++++|+++.+|... . ..+.... .. ... .+.++.++
T Consensus 206 ~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (327)
T PRK10754 206 GGKKVRVVYDSVGKDT-WEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELF 284 (327)
T ss_pred CCCCeEEEEECCcHHH-HHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHH
Confidence 57999999999865 889999999999999998541 1 1111100 10 011 12356688
Q ss_pred HHHHhCCCccc---eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 300 EYCAAHKIYPQ---IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 300 ~~~~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+++.+|.+++. ++.|++++++++++.+.+++..+|+||.
T Consensus 285 ~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 285 SLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 99999999753 4899999999999999998888999985
No 88
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5e-35 Score=265.61 Aligned_cols=286 Identities=25% Similarity=0.334 Sum_probs=228.4
Q ss_pred CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCC----CCCCCcccccceEEEEecCC----CCCCCCCC
Q 019199 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS----KYPLVPGHEIVGIVKEVGHN----VSRFKVGD 89 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~~G~V~~~G~~----~~~~~~Gd 89 (344)
++.....++.++|.|.+++++|++.++++|+.|..++.|..... .+|.+++.++.|++...++. +..+..||
T Consensus 16 ~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~ 95 (347)
T KOG1198|consen 16 GGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGD 95 (347)
T ss_pred CcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeee
Confidence 34445568899999999999999999999999999998876532 46766666666654333332 23455565
Q ss_pred EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY 169 (344)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~ 169 (344)
.+... ...|+|+||+++|+..++++|+++++.+||+++.++.|||
T Consensus 96 ~~~~~-----------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~ 140 (347)
T KOG1198|consen 96 AVVAF-----------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTAL 140 (347)
T ss_pred EEeec-----------------------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHH
Confidence 55322 3569999999999999999999999999999999999999
Q ss_pred HHHHhcc------CCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-
Q 019199 170 TPMMRHK------MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL- 241 (344)
Q Consensus 170 ~~l~~~~------~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~- 241 (344)
.++.... .+++|++|||+|+ |++|++++|+|+..++..++++.++++.+.+ +++|+++++|+++++..++.
T Consensus 141 ~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~-k~lGAd~vvdy~~~~~~e~~k 219 (347)
T KOG1198|consen 141 SALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV-KKLGADEVVDYKDENVVELIK 219 (347)
T ss_pred HHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH-HHcCCcEeecCCCHHHHHHHH
Confidence 9999999 8899999999987 9999999999999996556666677777777 79999999999998766554
Q ss_pred ---cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC----CccccC----------Cceee-----------eechH
Q 019199 242 ---GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP----SKVKFS----------PASLN-----------IGGTK 293 (344)
Q Consensus 242 ---~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~----~~~~~~----------~~~~~-----------~~~~~ 293 (344)
.++||+||||+|+.. ....+.++...|+...++.. .+.... .+... ....+
T Consensus 220 k~~~~~~DvVlD~vg~~~-~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (347)
T KOG1198|consen 220 KYTGKGVDVVLDCVGGST-LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAE 298 (347)
T ss_pred hhcCCCccEEEECCCCCc-cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHH
Confidence 358999999999975 78888888888865555433 111111 00000 33457
Q ss_pred hHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199 294 DTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQ 340 (344)
Q Consensus 294 ~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~ 340 (344)
.++.+.+++++++++|.+ +.||++++.+|++++.+++..||+++++.
T Consensus 299 ~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 299 YLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 899999999999999987 89999999999999999999999999875
No 89
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2e-34 Score=264.43 Aligned_cols=300 Identities=25% Similarity=0.354 Sum_probs=242.4
Q ss_pred ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCC
Q 019199 7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRF 85 (344)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~ 85 (344)
|||+..+...+....+++.+.+.|++.++||+||+.++++|+.|.....+..+ ....|.++|||++|+|+++|+.++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 45655555444444567777788889999999999999999999888876543 23456789999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (344)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~ 165 (344)
++||+|+.+. ..|++++|+.++.+.++++|++++..+++.+++.+
T Consensus 81 ~~Gd~V~~~~-----------------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~ 125 (334)
T PTZ00354 81 KEGDRVMALL-----------------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF 125 (334)
T ss_pred CCCCEEEEec-----------------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence 9999997431 23889999999999999999999999999999999
Q ss_pred hHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH-H---HHH
Q 019199 166 ITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE-Q---MKA 240 (344)
Q Consensus 166 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-~---~~~ 240 (344)
.|||+++.....+++|++|+|+|+ |.+|++++++|+.+|++++++++++++.+.+ +++|++.+++....+ . +.+
T Consensus 126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 204 (334)
T PTZ00354 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAIILIRYPDEEGFAPKVKK 204 (334)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChhHHHHHHHH
Confidence 999999988777799999999996 9999999999999999988888888888888 679998888876543 2 222
Q ss_pred hc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccc---cCCce-------ee---eec-h---------HhH
Q 019199 241 LG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVK---FSPAS-------LN---IGG-T---------KDT 295 (344)
Q Consensus 241 ~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~---~~~~~-------~~---~~~-~---------~~~ 295 (344)
.. +++|++||++++.. +..++++++++|+++.+|...... ++... +. ... . +.+
T Consensus 205 ~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
T PTZ00354 205 LTGEKGVNLVLDCVGGSY-LSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFE 283 (334)
T ss_pred HhCCCCceEEEECCchHH-HHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHH
Confidence 22 57999999998764 899999999999999998652212 22111 11 011 0 234
Q ss_pred HHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199 296 QEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343 (344)
Q Consensus 296 ~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~ 343 (344)
+++++++.++.+.+.+ +.+++++++++++.+.+++..+|+++.+.+++
T Consensus 284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~~ 332 (334)
T PTZ00354 284 REVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEPL 332 (334)
T ss_pred HHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence 6788899999988754 88999999999999998887899999988765
No 90
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=3.1e-34 Score=262.30 Aligned_cols=298 Identities=24% Similarity=0.307 Sum_probs=231.1
Q ss_pred ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
++.++..++++.++++++.+.|.+.+++|+||+.++++|++|+....|..+ ...+|.++|||++|+|+++ .++.|++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~ 79 (325)
T cd05280 2 KALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFRE 79 (325)
T ss_pred ceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCC
Confidence 444444433334788999999999999999999999999999988877653 2345788999999999998 4568999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t 167 (344)
||+|+..+.. .|....|+|++|+.++++.++++|+++++.+++.+++.+.|
T Consensus 80 Gd~V~~~~~~-----------------------------~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t 130 (325)
T cd05280 80 GDEVLVTGYD-----------------------------LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFT 130 (325)
T ss_pred CCEEEEcccc-----------------------------cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHH
Confidence 9999753210 01123589999999999999999999999999999999999
Q ss_pred hHHHHHhccCC--C-CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH--HHHHh
Q 019199 168 VYTPMMRHKMN--Q-PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKAL 241 (344)
Q Consensus 168 a~~~l~~~~~~--~-~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~ 241 (344)
|+.++....+. + .+++|+|+|+ |.+|++++++|+.+|++|+++++++++++.+ +++|++.+++..+.. ..+..
T Consensus 131 a~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 209 (325)
T cd05280 131 AALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEVLDREDLLDESKKPL 209 (325)
T ss_pred HHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEcchhHHHHHHHHh
Confidence 99988665432 4 4579999998 9999999999999999999999999998888 689999888876532 12222
Q ss_pred -cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCceee----------ee--c----hHhHHHHHHHH
Q 019199 242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN----------IG--G----TKDTQEMLEYC 302 (344)
Q Consensus 242 -~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~----------~~--~----~~~~~~~~~~~ 302 (344)
.+++|++||++++.. +..++++++++|+++.+|.. ....++...+. .. . .+.++.+.+++
T Consensus 210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (325)
T cd05280 210 LKARWAGAIDTVGGDV-LANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEW 288 (325)
T ss_pred cCCCccEEEECCchHH-HHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHH
Confidence 257999999999865 99999999999999999865 11222222221 11 0 12334455555
Q ss_pred HhCCCccceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 303 AAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 303 ~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
..+...+.+.+|++++++++++.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 289 KPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred hcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 5664444558999999999999999999899999864
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.9e-34 Score=262.72 Aligned_cols=306 Identities=25% Similarity=0.353 Sum_probs=244.8
Q ss_pred CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~ 96 (344)
....+++++.+.|.++++|++|++.++++|++|+....|..+ ....|.++|||++|+|+++|+++++|++||+|+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~ 90 (336)
T cd08276 11 GLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFF 90 (336)
T ss_pred CCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEecc
Confidence 346677888888889999999999999999999988877653 2346788999999999999999999999999987543
Q ss_pred ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (344)
Q Consensus 97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~ 176 (344)
. .|+. +....|... .+ +|...+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++....
T Consensus 91 ~-~~~~------~~~~~~~~~--~~-----~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~ 156 (336)
T cd08276 91 P-NWLD------GPPTAEDEA--SA-----LGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLG 156 (336)
T ss_pred c-cccc------ccccccccc--cc-----cccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhc
Confidence 2 3333 333444322 11 12234689999999999999999999999999999999999999998877
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-HH---HHHHhc--CCccEEEE
Q 019199 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LE---QMKALG--KSLDFIID 250 (344)
Q Consensus 177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~---~~~~~~--~~~dvvid 250 (344)
.+++|++|+|+|+|++|++++++++.+|++|++++.++++.+.+ +++|.+.+++... .+ .+.+.. +++|+++|
T Consensus 157 ~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 235 (336)
T cd08276 157 PLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERA-KALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVE 235 (336)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEE
Confidence 78999999999889999999999999999999999998888888 4689988887654 32 233333 57999999
Q ss_pred CCCCchhHHHHHHhcccCCEEEEEcCCCc--cccCCce-------ee---eechHhHHHHHHHHHhCCCccc-eEEEeCc
Q 019199 251 TASGDHPFDAYMSLLKVAGVYVLVGFPSK--VKFSPAS-------LN---IGGTKDTQEMLEYCAAHKIYPQ-IETIPIE 317 (344)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~~-------~~---~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~ 317 (344)
+++... +..++++++++|+++.+|.... ....... +. ....+.++++++++.++.+.+. ++.|+++
T Consensus 236 ~~~~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 314 (336)
T cd08276 236 VGGPGT-LAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFE 314 (336)
T ss_pred CCChHH-HHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccccCcEEeHH
Confidence 998654 8999999999999999986511 1111111 11 2335678999999999988765 4899999
Q ss_pred cHHHHHHHHHcCCcceEEEEEe
Q 019199 318 NVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+++++++.+.+++..+|+++++
T Consensus 315 ~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 315 EAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred HHHHHHHHHHhCCCCceEEEeC
Confidence 9999999999988889999863
No 92
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.3e-34 Score=266.89 Aligned_cols=283 Identities=23% Similarity=0.263 Sum_probs=230.9
Q ss_pred CccceeeccCCCCC-CcEEEEEeeeecccchhhhhcCCCCCC-C----CCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199 21 VLSPYSFNRRAVGS-DDVSITITHCGVCYADVIWTRNKHGDS-K----YPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (344)
Q Consensus 21 ~~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~ 94 (344)
.+.+++.+.|+|.+ ++|+||+.++|+|++|.....|..+.. . .|.++|||++|+|+++|+++..|++||+|+..
T Consensus 15 ~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 94 (341)
T cd08290 15 VLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPL 94 (341)
T ss_pred heEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEec
Confidence 37888999999887 999999999999999998887765421 2 57789999999999999999999999999753
Q ss_pred ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174 (344)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~ 174 (344)
+ ...|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++..
T Consensus 95 ~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~ 140 (341)
T cd08290 95 R----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLED 140 (341)
T ss_pred C----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHh
Confidence 2 124889999999999999999999999999999999999999977
Q ss_pred ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc----hhHHHHHHhCCCcEEEeCCCH---HH---HHHhc-
Q 019199 175 HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----SKKEEALSLLGADKFVVSSDL---EQ---MKALG- 242 (344)
Q Consensus 175 ~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~----~~~~~~~~~~g~~~~v~~~~~---~~---~~~~~- 242 (344)
...+++|++|||+|+ |++|++++++|++.|++|+++++++ ++.+.+ +++|++++++.+.. .. +....
T Consensus 141 ~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 219 (341)
T cd08290 141 FVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL-KALGADHVLTEEELRSLLATELLKSAPG 219 (341)
T ss_pred hcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHH-HhcCCCEEEeCcccccccHHHHHHHHcC
Confidence 777799999999987 9999999999999999998888776 567777 67999998887653 22 22222
Q ss_pred CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCc-------eee---e------ech----HhHHHHHH
Q 019199 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPA-------SLN---I------GGT----KDTQEMLE 300 (344)
Q Consensus 243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~-------~~~---~------~~~----~~~~~~~~ 300 (344)
+++|++||++|+.. +..++++++++|+++.+|.. ....++.. .+. . ... ..++++++
T Consensus 220 ~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08290 220 GRPKLALNCVGGKS-ATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAE 298 (341)
T ss_pred CCceEEEECcCcHh-HHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHH
Confidence 37999999999875 77899999999999999854 11112211 111 0 111 24778899
Q ss_pred HHHhCCCccce-EEE---eCccHHHHHHHHHcCCcceEEEEEe
Q 019199 301 YCAAHKIYPQI-ETI---PIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 301 ~~~~g~~~~~~-~~~---~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++.++.+.+.. ..+ ++++++++++.+.+++..||+|+.+
T Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 299 LIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 99999998754 677 9999999999999988889999864
No 93
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.9e-34 Score=262.44 Aligned_cols=284 Identities=24% Similarity=0.302 Sum_probs=231.3
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEec
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~ 95 (344)
...+++.+.+.|.+.+++|+|++.++++|++|+....|..+ ...+|.++|||++|+|+++|+.++.+++||+|+..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~ 91 (324)
T cd08244 12 PEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHT 91 (324)
T ss_pred ccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEcc
Confidence 44566667777778999999999999999999988877543 235578899999999999999999999999997532
Q ss_pred cccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc
Q 019199 96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH 175 (344)
Q Consensus 96 ~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~ 175 (344)
. ...|+|++|+.++...++++|+++++.+++.+++.+.||| ++...
T Consensus 92 ~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~ 137 (324)
T cd08244 92 G---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDL 137 (324)
T ss_pred C---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHh
Confidence 0 1258899999999999999999999999999999999995 44455
Q ss_pred cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---hc--CCccEEE
Q 019199 176 KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---LG--KSLDFII 249 (344)
Q Consensus 176 ~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~--~~~dvvi 249 (344)
..++++++|+|+|+ |.+|++++++|+.+|++|+++++++++.+.+ +++|++.+++.++.+.... .. +++|+++
T Consensus 138 ~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 216 (324)
T cd08244 138 ATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVREALGGGGVTVVL 216 (324)
T ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHcCCCCceEEE
Confidence 66799999999996 9999999999999999999999999988888 7899988888766443222 22 5799999
Q ss_pred ECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCc-------eee---e--e----chHhHHHHHHHHHhCCCccce
Q 019199 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPA-------SLN---I--G----GTKDTQEMLEYCAAHKIYPQI 311 (344)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~-------~~~---~--~----~~~~~~~~~~~~~~g~~~~~~ 311 (344)
|++|+.. ...++++++++|+++.+|... ...++.. .+. . . ..+.++++++++.++.+.+.+
T Consensus 217 ~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 295 (324)
T cd08244 217 DGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVV 295 (324)
T ss_pred ECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCcc
Confidence 9999886 799999999999999998651 1122211 111 0 0 125677889999999997655
Q ss_pred -EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 312 -ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 312 -~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+.|+++++++|++.+.+++..||+++.
T Consensus 296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (324)
T cd08244 296 GQTFPLERAAEAHAALEARSTVGKVLLL 323 (324)
T ss_pred ceEEeHHHHHHHHHHHHcCCCCceEEEe
Confidence 899999999999999998888999985
No 94
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.3e-34 Score=259.87 Aligned_cols=275 Identities=24% Similarity=0.328 Sum_probs=227.8
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~ 98 (344)
+..+++++.+.|.+.++||+||+.++++|+.|+....+ ...|.++|||++|+|+++|+.++.|++||+|+...
T Consensus 11 ~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~--- 83 (305)
T cd08270 11 PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLG--- 83 (305)
T ss_pred CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec---
Confidence 55677778899999999999999999999999877652 12357899999999999999999999999997421
Q ss_pred CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (344)
Q Consensus 99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 178 (344)
..|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++......
T Consensus 84 --------------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~ 131 (305)
T cd08270 84 --------------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL 131 (305)
T ss_pred --------------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC
Confidence 248999999999999999999999999999999999999999888774
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
+|++|+|+|+ |++|++++++++.+|++|+.+++++++.+.+ +++|++..++... + ...+++|+++|++|+..
T Consensus 132 -~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~-~---~~~~~~d~vl~~~g~~~- 204 (305)
T cd08270 132 -LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL-RELGAAEVVVGGS-E---LSGAPVDLVVDSVGGPQ- 204 (305)
T ss_pred -CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEeccc-c---ccCCCceEEEECCCcHH-
Confidence 5999999998 9999999999999999999999988888888 5699876554332 1 11257999999999875
Q ss_pred HHHHHHhcccCCEEEEEcCCC--ccccCC--c-------eee---ee----chHhHHHHHHHHHhCCCccce-EEEeCcc
Q 019199 258 FDAYMSLLKVAGVYVLVGFPS--KVKFSP--A-------SLN---IG----GTKDTQEMLEYCAAHKIYPQI-ETIPIEN 318 (344)
Q Consensus 258 ~~~~~~~l~~~G~iv~~g~~~--~~~~~~--~-------~~~---~~----~~~~~~~~~~~~~~g~~~~~~-~~~~~~~ 318 (344)
+..++++++++|+++.+|... ...++. + .+. .. ..+.++.+++++.++++++.+ +++++++
T Consensus 205 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (305)
T cd08270 205 LARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTE 284 (305)
T ss_pred HHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHH
Confidence 899999999999999998541 111111 1 111 11 135688899999999998754 8999999
Q ss_pred HHHHHHHHHcCCcceEEEEEe
Q 019199 319 VNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 319 ~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++++++.+.+++..||+|+.+
T Consensus 285 ~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 285 IDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHcCCCCceEEEeC
Confidence 999999999998889999864
No 95
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=5.3e-34 Score=262.53 Aligned_cols=298 Identities=22% Similarity=0.268 Sum_probs=236.7
Q ss_pred eeeecCC-CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDP-SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+++...+ +..+++++++.|+|+++||+||+.++++|++|+....+.. ....|.++|||++|+|+.+|++++.+++||+
T Consensus 3 a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~ 81 (339)
T cd08249 3 AAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVGDR 81 (339)
T ss_pred eEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCCCE
Confidence 4444322 4778899999999999999999999999999988775543 1234678999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 170 (344)
|+..+.. .|+ +...+|+|++|+.++.+.++++|+++++.+++.+++.+.|||+
T Consensus 82 V~~~~~~-~~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~ 134 (339)
T cd08249 82 VAGFVHG-GNP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAAL 134 (339)
T ss_pred EEEEecc-ccC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHH
Confidence 9864321 000 1124689999999999999999999999999999999999999
Q ss_pred HHHhccCC----------CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH-
Q 019199 171 PMMRHKMN----------QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM- 238 (344)
Q Consensus 171 ~l~~~~~~----------~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~- 238 (344)
++.....+ +++++|+|+|+ |.+|++++++|+.+|++|+.++ ++++.+.+ +++|++++++.++.+..
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~-~~~g~~~v~~~~~~~~~~ 212 (339)
T cd08249 135 ALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLV-KSLGADAVFDYHDPDVVE 212 (339)
T ss_pred HHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHH-HhcCCCEEEECCCchHHH
Confidence 98766543 68999999997 9999999999999999998887 55777777 78999999988764332
Q ss_pred --HHh-cCCccEEEECCCCchhHHHHHHhccc--CCEEEEEcCCCcc-ccCC-ceee-------e--------echHhHH
Q 019199 239 --KAL-GKSLDFIIDTASGDHPFDAYMSLLKV--AGVYVLVGFPSKV-KFSP-ASLN-------I--------GGTKDTQ 296 (344)
Q Consensus 239 --~~~-~~~~dvvid~~g~~~~~~~~~~~l~~--~G~iv~~g~~~~~-~~~~-~~~~-------~--------~~~~~~~ 296 (344)
.+. .+++|+++|++|++..+..+++++++ +|+++.+|..... .+.. .... . .....++
T Consensus 213 ~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (339)
T cd08249 213 DIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWK 292 (339)
T ss_pred HHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHH
Confidence 222 36799999999985569999999999 9999999865111 1111 1100 1 1114577
Q ss_pred HHHHHHHhCCCccce-EEEe--CccHHHHHHHHHcCC-cceEEEEEe
Q 019199 297 EMLEYCAAHKIYPQI-ETIP--IENVNEALERLIKRD-VKYRFVIDI 339 (344)
Q Consensus 297 ~~~~~~~~g~~~~~~-~~~~--~~~~~~a~~~~~~~~-~~gkvvi~~ 339 (344)
.+++++.++.+.+.. ..++ ++++++|++.+.+++ ..+|+|+++
T Consensus 293 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 293 YLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 789999999998753 6777 999999999999988 889999874
No 96
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=6.4e-34 Score=260.19 Aligned_cols=290 Identities=24% Similarity=0.334 Sum_probs=230.0
Q ss_pred CCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEec
Q 019199 17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95 (344)
Q Consensus 17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~ 95 (344)
+++..++++++|.|.+.+++|+||+.++++|++|+..+.|..+ ...+|.++|||++|+|++ +.++.|++||+|+..+
T Consensus 9 ~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~ 86 (323)
T TIGR02823 9 DGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTG 86 (323)
T ss_pred CCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEcc
Confidence 3445778999999999999999999999999999988877653 234578899999999998 5567899999997542
Q ss_pred cccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc
Q 019199 96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH 175 (344)
Q Consensus 96 ~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~ 175 (344)
.. .|....|++++|+.++.+.++++|+++++.+++.+++.+.+|+.++...
T Consensus 87 ~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~ 137 (323)
T TIGR02823 87 YG-----------------------------LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMAL 137 (323)
T ss_pred CC-----------------------------CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHh
Confidence 10 0112358999999999999999999999999999999999998877544
Q ss_pred cC--CCCCC-EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH-HHHhc-CCccEEE
Q 019199 176 KM--NQPGK-SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-MKALG-KSLDFII 249 (344)
Q Consensus 176 ~~--~~~g~-~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-~~~~~-~~~dvvi 249 (344)
.+ +.+|+ +|+|+|+ |.+|++++++|+.+|+++++++.++++.+.+ +++|++.+++..+... +.... +++|+++
T Consensus 138 ~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vl 216 (323)
T TIGR02823 138 ERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASEVIDREDLSPPGKPLEKERWAGAV 216 (323)
T ss_pred hhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcEEEccccHHHHHHHhcCCCceEEE
Confidence 32 58898 9999998 9999999999999999999988888888777 7899988888765432 22332 4699999
Q ss_pred ECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-------e-----eec----hHhHHHHHHHHHhCCCccce
Q 019199 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-------N-----IGG----TKDTQEMLEYCAAHKIYPQI 311 (344)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-------~-----~~~----~~~~~~~~~~~~~g~~~~~~ 311 (344)
|++|+.. +..++++++++|+++.+|... ...++...+ . ... .+.++.+.+++..+.+.+.+
T Consensus 217 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (323)
T TIGR02823 217 DTVGGHT-LANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESIT 295 (323)
T ss_pred ECccHHH-HHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCce
Confidence 9999875 899999999999999998651 111111111 1 011 12355666777788887667
Q ss_pred EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 312 ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+.|+++++++||+.+.+++..||+|+++
T Consensus 296 ~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 296 REITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred eeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 8999999999999999999899999864
No 97
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-33 Score=257.60 Aligned_cols=285 Identities=23% Similarity=0.315 Sum_probs=230.6
Q ss_pred CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (344)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~ 99 (344)
..+++.+.+.|.+.++||+||+.++++|+.|+....+..+....|.++|||++|+|+++|+ ..+++||+|+.....
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~-- 88 (320)
T cd08243 13 EVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGG-- 88 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCC--
Confidence 4566677777889999999999999999999988877665455678999999999999995 579999999754210
Q ss_pred CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (344)
Q Consensus 100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 179 (344)
+ +....|+|++|+.+++..++++|+++++.+++.+++++.|||+++.....++
T Consensus 89 ------------------------~---~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 141 (320)
T cd08243 89 ------------------------M---GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQ 141 (320)
T ss_pred ------------------------C---CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCC
Confidence 0 1123589999999999999999999999999999999999999998888789
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC--HHHHHHhcCCccEEEECCCCch
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--LEQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~~~~~~dvvid~~g~~~ 256 (344)
+|++|+|+|+ |.+|++++++|+.+|++|+++++++++.+.+ +++|++++++... .+.+.+..+++|+++|++++..
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~ 220 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTAT 220 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHH
Confidence 9999999997 9999999999999999999999999888888 6899988775432 1223333568999999999864
Q ss_pred hHHHHHHhcccCCEEEEEcCC-Cccc------cCCc----eee-ee------chHhHHHHHHHHHhCCCccc-eEEEeCc
Q 019199 257 PFDAYMSLLKVAGVYVLVGFP-SKVK------FSPA----SLN-IG------GTKDTQEMLEYCAAHKIYPQ-IETIPIE 317 (344)
Q Consensus 257 ~~~~~~~~l~~~G~iv~~g~~-~~~~------~~~~----~~~-~~------~~~~~~~~~~~~~~g~~~~~-~~~~~~~ 317 (344)
+..++++++++|+++.+|.. .... +... ... .. ..+.++++++++.++.+++. ++.|+++
T Consensus 221 -~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (320)
T cd08243 221 -LKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFD 299 (320)
T ss_pred -HHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHH
Confidence 99999999999999999863 1111 1100 000 11 12357888999999998764 4889999
Q ss_pred cHHHHHHHHHcCCcceEEEE
Q 019199 318 NVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvi 337 (344)
++++|++.+.+++..+|+++
T Consensus 300 ~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 300 EIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHHHHhCCCCCcEEe
Confidence 99999999998888889886
No 98
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=8.2e-34 Score=257.55 Aligned_cols=256 Identities=26% Similarity=0.438 Sum_probs=211.8
Q ss_pred eeeecCC-CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199 12 GWAARDP-SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90 (344)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~ 90 (344)
+|+..++ +..+++++++.|++.+++|+||+.++++|++|.....+.......|.++|+|++|+|+++|++++.|++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 82 (306)
T cd08258 3 ALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDR 82 (306)
T ss_pred eEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCCE
Confidence 4444433 356889999999999999999999999999999888776533345788999999999999999999999999
Q ss_pred EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199 91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT 170 (344)
Q Consensus 91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 170 (344)
|+..+..+.|+.|.+|..+....|+... .+ + ....|+|++|+.++...++++|+++++.+++ ++..+.+||+
T Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-----~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~ 154 (306)
T cd08258 83 VVSETTFSTCGRCPYCRRGDYNLCPHRK-GI-G-----TQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH 154 (306)
T ss_pred EEEccCcCCCCCCcchhCcCcccCCCCc-ee-e-----ecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence 9988877789999999999999998631 11 1 1245899999999999999999999999887 7778889999
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeC--CchhHHHHHHhCCCcEEEeCCCHHH---HHHh--cC
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST--STSKKEEALSLLGADKFVVSSDLEQ---MKAL--GK 243 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~--~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~ 243 (344)
++.....+++|++|||.|+|.+|++++++|+.+|++|+++.. .+++.+.+ +++|++++ +....+. +.+. .+
T Consensus 155 ~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~l~~~~~~~ 232 (306)
T cd08258 155 AVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVA-KELGADAV-NGGEEDLAELVNEITDGD 232 (306)
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH-HHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence 988888889999999988899999999999999999887743 33355555 68998877 6654433 2222 25
Q ss_pred CccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
++|+++|++|+...+..++++++++|+++.+|..
T Consensus 233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~ 266 (306)
T cd08258 233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIF 266 (306)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEccc
Confidence 7999999998766689999999999999999876
No 99
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.3e-33 Score=258.90 Aligned_cols=291 Identities=24% Similarity=0.322 Sum_probs=235.0
Q ss_pred cceeeeeecCC--CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC
Q 019199 8 KDCLGWAARDP--SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR 84 (344)
Q Consensus 8 ~~~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~ 84 (344)
|+++.+.-.++ ++.+++++.+.|.+.++|++||+.++++|+.|+....|... ...+|.++|||++|+|+.+|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 44444444444 67788899999999999999999999999999988877654 2457889999999999999999999
Q ss_pred CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199 85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA 164 (344)
Q Consensus 85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~ 164 (344)
+++||+|+.. ..|+|++|+.++.+.++++|++ +.+++.+++.
T Consensus 82 ~~~Gd~V~~~------------------------------------~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~ 123 (329)
T cd08250 82 FKVGDAVATM------------------------------------SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS 123 (329)
T ss_pred CCCCCEEEEe------------------------------------cCcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence 9999999752 2488999999999999999997 3567789999
Q ss_pred hhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHH
Q 019199 165 GITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKA 240 (344)
Q Consensus 165 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~ 240 (344)
+.|||+++.....+++|++++|+|+ |.+|++++++++..|++|+++++++++.+.+ +++|++.+++....+. +..
T Consensus 124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~ 202 (329)
T cd08250 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLKK 202 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHHH
Confidence 9999999988777899999999996 9999999999999999999999988888888 6899988887655432 222
Q ss_pred h-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCcc------------ccCC--c----eee---ee-----chH
Q 019199 241 L-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKV------------KFSP--A----SLN---IG-----GTK 293 (344)
Q Consensus 241 ~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------------~~~~--~----~~~---~~-----~~~ 293 (344)
. .+++|++||++|+.. +..++++++++|+++.+|..... .++. + .+. .. ..+
T Consensus 203 ~~~~~vd~v~~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (329)
T cd08250 203 EYPKGVDVVYESVGGEM-FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQ 281 (329)
T ss_pred hcCCCCeEEEECCcHHH-HHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHH
Confidence 2 367999999999754 99999999999999999865110 1110 0 001 00 124
Q ss_pred hHHHHHHHHHhCCCccc---eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 294 DTQEMLEYCAAHKIYPQ---IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 294 ~~~~~~~~~~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
.++++++++.++.+++. .+.|+++++++|++.+.+++..+|++++
T Consensus 282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 282 HLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 56788899999998763 3568999999999999998888999874
No 100
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.3e-33 Score=259.40 Aligned_cols=282 Identities=26% Similarity=0.360 Sum_probs=229.0
Q ss_pred ccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCC---------------CCCCCCCcccccceEEEEecCCCCCC
Q 019199 22 LSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHG---------------DSKYPLVPGHEIVGIVKEVGHNVSRF 85 (344)
Q Consensus 22 ~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e~~G~V~~~G~~~~~~ 85 (344)
+.+++.+.|+| .++||+||+.++++|++|+....|... ....|.++|||++|+|+++|+.+++|
T Consensus 16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~ 95 (350)
T cd08248 16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF 95 (350)
T ss_pred eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence 78888999999 499999999999999999988776421 23457899999999999999999999
Q ss_pred CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199 86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165 (344)
Q Consensus 86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~ 165 (344)
++||+|+..+.. ...|+|++|+.++++.++++|++++..+++.+++.+
T Consensus 96 ~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~ 143 (350)
T cd08248 96 EIGDEVWGAVPP--------------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAG 143 (350)
T ss_pred CCCCEEEEecCC--------------------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHH
Confidence 999999764321 124889999999999999999999999999999999
Q ss_pred hHhHHHHHhccCCCC----CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH
Q 019199 166 ITVYTPMMRHKMNQP----GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240 (344)
Q Consensus 166 ~ta~~~l~~~~~~~~----g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 240 (344)
.|||.++.+...+.+ |++|+|+|+ |.+|++++++++.+|++|+++.++ ++.+.+ +++|.+.+++..+.+....
T Consensus 144 ~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~ 221 (350)
T cd08248 144 LTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLV-KSLGADDVIDYNNEDFEEE 221 (350)
T ss_pred HHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHH-HHhCCceEEECCChhHHHH
Confidence 999999877776554 999999996 999999999999999999887754 555555 7899988888776544433
Q ss_pred h--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---cc--cc--CCc----eee------------------e
Q 019199 241 L--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KV--KF--SPA----SLN------------------I 289 (344)
Q Consensus 241 ~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~--~~--~~~----~~~------------------~ 289 (344)
+ .+++|++||++|+. ....++++++++|+++.+|... .. .+ ..+ .+. .
T Consensus 222 l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
T cd08248 222 LTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFS 300 (350)
T ss_pred HHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence 3 26799999999987 4999999999999999998541 10 01 000 000 0
Q ss_pred echHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 290 GGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
...+.++++++++.++.+.+.+ +.|++++++++++.+.+++..+|++++
T Consensus 301 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 301 PSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred CCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 1235688899999999987654 899999999999999988878898863
No 101
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.2e-33 Score=258.10 Aligned_cols=281 Identities=21% Similarity=0.280 Sum_probs=234.0
Q ss_pred CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199 21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (344)
Q Consensus 21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~ 99 (344)
.+++++.+.|++.+++|+||+.++++|+.|...+.+... ...+|.++|||++|+|+++|++++.+++||+|+..+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence 577778889999999999999999999999888766543 234578999999999999999999999999997532
Q ss_pred CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (344)
Q Consensus 100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 179 (344)
..|+|++|+.++...++++|++++..+++.+++.+.|||+++.....+.
T Consensus 89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 1488999999999999999999999999999999999999988887789
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---hc--CCccEEEECCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---LG--KSLDFIIDTAS 253 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~--~~~dvvid~~g 253 (344)
+|++|+|+|+ |.+|++++++|+.+|++|+++++++++.+.+ +++|++++++........+ .. +++|+++|++|
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 9999999987 8999999999999999999999999998888 6899999988776443332 22 57999999999
Q ss_pred CchhHHHHHHhcccCCEEEEEcCC-Cc-cccCC-------ceee---ee------c----hHhHHHHHHHHHhCCCccc-
Q 019199 254 GDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSP-------ASLN---IG------G----TKDTQEMLEYCAAHKIYPQ- 310 (344)
Q Consensus 254 ~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~~-------~~~~---~~------~----~~~~~~~~~~~~~g~~~~~- 310 (344)
+.. ...++++++++|+++.+|.. .. ..++. ..+. .. . .+.++++++++.++.+.+.
T Consensus 217 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 295 (323)
T cd05282 217 GES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPV 295 (323)
T ss_pred CHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCc
Confidence 876 78889999999999999865 21 11111 1111 11 1 1357778899999999775
Q ss_pred eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 311 IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
.+.|++++++++++.+.+++..+|++++
T Consensus 296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 296 GAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred cceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 4889999999999999998888998863
No 102
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=3.6e-33 Score=255.56 Aligned_cols=298 Identities=23% Similarity=0.325 Sum_probs=223.2
Q ss_pred ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC-CCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-GDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
++..+...+++..+.+++.+.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.| +++|++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~~ 79 (326)
T cd08289 2 QALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFKP 79 (326)
T ss_pred eeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCCC
Confidence 34444433333457788999999999999999999999999986654321 123457899999999999954 578999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t 167 (344)
||+|+..+.. .|....|+|++|+.++++.++++|+++++.+++.+++.+.|
T Consensus 80 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~t 130 (326)
T cd08289 80 GDEVIVTSYD-----------------------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFT 130 (326)
T ss_pred CCEEEEcccc-----------------------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHH
Confidence 9999754310 01124589999999999999999999999999999999999
Q ss_pred hHHHHHhccC---CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHh
Q 019199 168 VYTPMMRHKM---NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKAL 241 (344)
Q Consensus 168 a~~~l~~~~~---~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~ 241 (344)
|+.++....+ ...+++|||+|+ |.+|++++++|+.+|++|+++++++++.+.+ +++|++++++.++. +.+.+.
T Consensus 131 a~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~ 209 (326)
T cd08289 131 AALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEVIPREELQEESIKPL 209 (326)
T ss_pred HHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEEEcchhHHHHHHHhh
Confidence 9888754332 345789999998 9999999999999999999999999999888 68999888887653 222222
Q ss_pred -cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-------e----eec-hHhHHHHHHHHHh--
Q 019199 242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-------N----IGG-TKDTQEMLEYCAA-- 304 (344)
Q Consensus 242 -~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-------~----~~~-~~~~~~~~~~~~~-- 304 (344)
.+++|++||++|+. .+..++++++++|+++.+|... ..++....+ . ... .....++++.+.+
T Consensus 210 ~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (326)
T cd08289 210 EKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDL 288 (326)
T ss_pred ccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhc
Confidence 35799999999985 4999999999999999998651 112111111 0 011 1223334333332
Q ss_pred --CCCcc-ceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 305 --HKIYP-QIETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 305 --g~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
..+.+ ..++|+++++++||+.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 289 KPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred CccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 21222 358999999999999999999889999864
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=5.7e-33 Score=255.26 Aligned_cols=284 Identities=25% Similarity=0.341 Sum_probs=230.3
Q ss_pred ccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCC
Q 019199 22 LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCR 101 (344)
Q Consensus 22 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~ 101 (344)
+..++++.|++.+++|+||+.++++|++|+....+..+....|.++|||++|+|+++|+.+..|++||+|+.....
T Consensus 18 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---- 93 (336)
T cd08252 18 LIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI---- 93 (336)
T ss_pred eeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCC----
Confidence 6667788888999999999999999999988877765434467789999999999999999999999999742110
Q ss_pred CCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCC-
Q 019199 102 DCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP- 180 (344)
Q Consensus 102 ~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~- 180 (344)
...|+|++|+.++.+.++++|++++..+++.+++.+.|||.++.....+.+
T Consensus 94 ----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~ 145 (336)
T cd08252 94 ----------------------------TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISED 145 (336)
T ss_pred ----------------------------CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCC
Confidence 135889999999999999999999999999999999999999877666676
Q ss_pred ----CCEEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc-CCccEEEEC
Q 019199 181 ----GKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG-KSLDFIIDT 251 (344)
Q Consensus 181 ----g~~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~-~~~dvvid~ 251 (344)
|++|+|+|+ |++|++++++++.+| ++|+++++++++.+.+ +++|++.+++.... ..+.... +++|+++|+
T Consensus 146 ~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~ 224 (336)
T cd08252 146 AENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHVINHHQDLAEQLEALGIEPVDYIFCL 224 (336)
T ss_pred cCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEc
Confidence 999999986 999999999999999 8999999999988888 68999888887631 2222223 579999999
Q ss_pred CCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc-----eee---ee------------chHhHHHHHHHHHhCCCccc
Q 019199 252 ASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-----SLN---IG------------GTKDTQEMLEYCAAHKIYPQ 310 (344)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~-----~~~---~~------------~~~~~~~~~~~~~~g~~~~~ 310 (344)
+++...+..++++++++|+++.+|.. ...+...+ .+. .. ..+.++++++++.++.+++.
T Consensus 225 ~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (336)
T cd08252 225 TDTDQHWDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT 304 (336)
T ss_pred cCcHHHHHHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence 99765699999999999999999854 11111111 111 00 01347789999999999864
Q ss_pred e----EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 311 I----ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 311 ~----~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
. +.+++++++++++.+.+++..+|++++
T Consensus 305 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 305 LTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred eeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 2 357999999999999999888999864
No 104
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=7.8e-33 Score=251.62 Aligned_cols=280 Identities=21% Similarity=0.264 Sum_probs=223.7
Q ss_pred CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhh-cCCCCC--CCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199 18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWT-RNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~ 94 (344)
+++.++++++++|++.++||+||+.++++|++|+..+ .|.... +..|.++|||++|+|+++|+.++++++||+|+.+
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 82 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL 82 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe
Confidence 3467888999999999999999999999999998877 664421 2347889999999999999999999999999753
Q ss_pred ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199 95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174 (344)
Q Consensus 95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~ 174 (344)
+ .|+|++|+.++++.++++|+++ ..++....++.++++++.
T Consensus 83 ~------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~- 123 (312)
T cd08269 83 S------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR- 123 (312)
T ss_pred c------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence 2 3789999999999999999998 222222367788998887
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEE
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFI 248 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvv 248 (344)
...+++|++|+|+|+|.+|++++++|+.+|++ |+++++.+++.+.+ +++|++.+++.+..+. +.+.. .++|++
T Consensus 124 ~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~v 202 (312)
T cd08269 124 RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALA-RELGATEVVTDDSEAIVERVRELTGGAGADVV 202 (312)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCceEecCCCcCHHHHHHHHcCCCCCCEE
Confidence 56668999999998899999999999999998 99998888888766 7899988887654332 33332 579999
Q ss_pred EECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCC-------ceee---ee----chHhHHHHHHHHHhCCCcc---
Q 019199 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSP-------ASLN---IG----GTKDTQEMLEYCAAHKIYP--- 309 (344)
Q Consensus 249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~-------~~~~---~~----~~~~~~~~~~~~~~g~~~~--- 309 (344)
+|++|+...+..++++++++|+++.+|... ...++. ..+. .. ..+.++++++++.++.+.+
T Consensus 203 ld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 282 (312)
T cd08269 203 IEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSL 282 (312)
T ss_pred EECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhh
Confidence 999987666899999999999999998541 111111 1111 11 1257899999999999986
Q ss_pred ceEEEeCccHHHHHHHHHcCCc-ceEEEE
Q 019199 310 QIETIPIENVNEALERLIKRDV-KYRFVI 337 (344)
Q Consensus 310 ~~~~~~~~~~~~a~~~~~~~~~-~gkvvi 337 (344)
..+.|++++++++++.+.+++. .+|+++
T Consensus 283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 283 LTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 3478999999999999999865 589886
No 105
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=5.8e-32 Score=247.35 Aligned_cols=298 Identities=20% Similarity=0.310 Sum_probs=231.4
Q ss_pred ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
|+..+.-.++++.+++++.+.|+|.++||+||+.++++|++|.....|... ...+|.++|||++|+|++ +.++.+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 79 (324)
T cd08288 2 KALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFKP 79 (324)
T ss_pred eeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCCC
Confidence 333343333334688899999999999999999999999999988776543 234578899999999999 67788999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t 167 (344)
||+|+..... .+....|+|++|+.++.+.++++|++++..+++.+++.+.+
T Consensus 80 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~t 130 (324)
T cd08288 80 GDRVVLTGWG-----------------------------VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFT 130 (324)
T ss_pred CCEEEECCcc-----------------------------CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHH
Confidence 9999753200 01113588999999999999999999999999999999999
Q ss_pred hHHHHH---hccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH-HHHh-
Q 019199 168 VYTPMM---RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-MKAL- 241 (344)
Q Consensus 168 a~~~l~---~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-~~~~- 241 (344)
++.++. ......+|++|+|+|+ |.+|++++++|+.+|++|++++.++++.+.+ +++|+++++++++... +...
T Consensus 131 a~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 209 (324)
T cd08288 131 AMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGASEIIDRAELSEPGRPLQ 209 (324)
T ss_pred HHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCEEEEcchhhHhhhhhc
Confidence 887654 3444236789999998 9999999999999999999999999998888 7899999998765432 2222
Q ss_pred cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-------e-----e----echHhHHHHHHHHH
Q 019199 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-------N-----I----GGTKDTQEMLEYCA 303 (344)
Q Consensus 242 ~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-------~-----~----~~~~~~~~~~~~~~ 303 (344)
.+++|.++|++++.. +...+..++.+|+++.+|... ...++...+ . . ...+.++.+++++.
T Consensus 210 ~~~~~~~~d~~~~~~-~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (324)
T cd08288 210 KERWAGAVDTVGGHT-LANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLD 288 (324)
T ss_pred cCcccEEEECCcHHH-HHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHh
Confidence 246899999999754 778889999999999998641 111111111 0 0 11235677788888
Q ss_pred hCCCccceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 304 AHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 304 ~g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++.+.+.++.+++++++++++.+.+++..||+++++
T Consensus 289 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 289 PALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 888877678999999999999999999889999864
No 106
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.5e-32 Score=249.42 Aligned_cols=289 Identities=24% Similarity=0.330 Sum_probs=233.9
Q ss_pred eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199 10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88 (344)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~G 88 (344)
++.+...+.+..+++++.+.|.|.+++|+|++.++++|++|+....|..+ ...+|.++|||++|+|+.+|+++..|++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 82 (331)
T cd08273 3 EVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVG 82 (331)
T ss_pred eEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCC
Confidence 34444444456788889999999999999999999999999988877653 23467899999999999999999999999
Q ss_pred CEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHh
Q 019199 89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV 168 (344)
Q Consensus 89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta 168 (344)
|+|+..+ ..|++++|+.++.+.++++|++++..+++.+++.+.+|
T Consensus 83 d~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta 127 (331)
T cd08273 83 DRVAALT-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTA 127 (331)
T ss_pred CEEEEeC-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHH
Confidence 9997532 13789999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH--HhcCCc
Q 019199 169 YTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK--ALGKSL 245 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--~~~~~~ 245 (344)
|+++.....+.+|++|+|+|+ |.+|++++++++.+|++|+++++ +++.+.+ +++|++. ++....+... ...+++
T Consensus 128 ~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~ 204 (331)
T cd08273 128 YQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAAL-RELGATP-IDYRTKDWLPAMLTPGGV 204 (331)
T ss_pred HHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHH-HHcCCeE-EcCCCcchhhhhccCCCc
Confidence 999988777799999999997 99999999999999999999987 7777777 6789654 4443322221 123679
Q ss_pred cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--c--cccCC-------------c----eee-----e-------ec
Q 019199 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--K--VKFSP-------------A----SLN-----I-------GG 291 (344)
Q Consensus 246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~--~~~~~-------------~----~~~-----~-------~~ 291 (344)
|+++|++++.. +..++++++++|+++.+|.. . . ..+++ . .+. . ..
T Consensus 205 d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 283 (331)
T cd08273 205 DVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLF 283 (331)
T ss_pred eEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHH
Confidence 99999999887 99999999999999999865 1 1 11100 0 000 0 01
Q ss_pred hHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 292 TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 292 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
.+.++++++++.++.+++.. +.|++++++++++.+.+++..||+|+
T Consensus 284 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 284 RQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 35678899999999998754 88999999999999998888899886
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=4.5e-32 Score=247.24 Aligned_cols=299 Identities=20% Similarity=0.271 Sum_probs=238.7
Q ss_pred ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
++.++...+.+..+.+.+++.|.+.+++|+|++.++++|++|.....|... ....|.++|||++|+|+++|+++.+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 81 (325)
T cd08253 2 RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKV 81 (325)
T ss_pred ceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCC
Confidence 445555444455688889999999999999999999999999988777543 3456789999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t 167 (344)
||+|+..+.. . . ...|++++|+.++.+.++++|++++..+++.+++++.+
T Consensus 82 Gd~v~~~~~~--------------------------~--~--~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~ 131 (325)
T cd08253 82 GDRVWLTNLG--------------------------W--G--RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALT 131 (325)
T ss_pred CCEEEEeccc--------------------------c--C--CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHH
Confidence 9999764310 0 0 13588999999999999999999999999999999999
Q ss_pred hHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHh--
Q 019199 168 VYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KAL-- 241 (344)
Q Consensus 168 a~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~-- 241 (344)
||+++.....+.+|++++|+|+ |.+|++++++++..|++|+++++++++.+.+ +++|++.+++....+.. .+.
T Consensus 132 a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 210 (325)
T cd08253 132 AYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGADAVFNYRAEDLADRILAATA 210 (325)
T ss_pred HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHHcC
Confidence 9999988677799999999997 9999999999999999999999998888888 57898888887654332 222
Q ss_pred cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-ccccCCce-------ee-----eec----hHhHHHHHHHHHh
Q 019199 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-KVKFSPAS-------LN-----IGG----TKDTQEMLEYCAA 304 (344)
Q Consensus 242 ~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~-------~~-----~~~----~~~~~~~~~~~~~ 304 (344)
.+++|+++++.++.. ....+++++++|+++.+|... ...++... +. ... .+.++.+.+++.+
T Consensus 211 ~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (325)
T cd08253 211 GQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLAD 289 (325)
T ss_pred CCceEEEEECCchHH-HHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHC
Confidence 257999999999876 888999999999999998631 11111111 11 111 1345666777888
Q ss_pred CCCccc-eEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 305 HKIYPQ-IETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 305 g~~~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+.+++. ++.|++++++++++.+.++...||+++++
T Consensus 290 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 290 GALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 888765 48899999999999999988889999863
No 108
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=6.3e-32 Score=250.04 Aligned_cols=296 Identities=22% Similarity=0.254 Sum_probs=225.5
Q ss_pred eeeecCCCCCccceeeccCCC---CCCcEEEEEeeeecccchhhhhcCCCCCCC-CCCCcccccceEEEEecCCCC-CCC
Q 019199 12 GWAARDPSGVLSPYSFNRRAV---GSDDVSITITHCGVCYADVIWTRNKHGDSK-YPLVPGHEIVGIVKEVGHNVS-RFK 86 (344)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~V~~~G~~~~-~~~ 86 (344)
+|+..+..+.+++++.+.|.| .+++|+||+.++++|++|+....+...... .|.++|||++|+|+++|++++ .|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~ 82 (352)
T cd08247 3 ALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWK 82 (352)
T ss_pred eEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCC
Confidence 444444444555655555554 999999999999999999887654322112 377899999999999999998 899
Q ss_pred CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc----eEEEcCCCCCcccccccc
Q 019199 87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER----YCYKIANDYPLALAAPLL 162 (344)
Q Consensus 87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~P~~~~~~~aa~l~ 162 (344)
+||+|+..... . ....|+|++|+.+++. .++++|+++++.+++.++
T Consensus 83 ~Gd~V~~~~~~----~--------------------------~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~ 132 (352)
T cd08247 83 VGDEVCGIYPH----P--------------------------YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWP 132 (352)
T ss_pred CCCEEEEeecC----C--------------------------CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhH
Confidence 99999754311 0 0135899999999987 799999999999999999
Q ss_pred hhhhHhHHHHHhcc-CCCCCCEEEEECC-ChHHHHHHHHHHHC-CC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH--
Q 019199 163 CAGITVYTPMMRHK-MNQPGKSLGVIGL-GGLGHMAVKFGKAF-GL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE-- 236 (344)
Q Consensus 163 ~~~~ta~~~l~~~~-~~~~g~~vlI~Ga-g~~G~~ai~~a~~~-g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-- 236 (344)
+.+.|||+++.... .+++|++|+|+|+ +.+|++++++|+.+ +. +|+.+. ++++.+.+ +++|++.+++.++.+
T Consensus 133 ~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~-~~~g~~~~i~~~~~~~~ 210 (352)
T cd08247 133 LVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELN-KKLGADHFIDYDAHSGV 210 (352)
T ss_pred HHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHH-HHhCCCEEEecCCCccc
Confidence 99999999998877 6799999999998 89999999999987 44 566665 45555556 789998888865433
Q ss_pred -H----HHHh--cCCccEEEECCCCchhHHHHHHhcc---cCCEEEEEcCCC--c-c--c--------cCCcee------
Q 019199 237 -Q----MKAL--GKSLDFIIDTASGDHPFDAYMSLLK---VAGVYVLVGFPS--K-V--K--------FSPASL------ 287 (344)
Q Consensus 237 -~----~~~~--~~~~dvvid~~g~~~~~~~~~~~l~---~~G~iv~~g~~~--~-~--~--------~~~~~~------ 287 (344)
. +... .+++|++||++|+......++++++ ++|+++.++... . . . +....+
T Consensus 211 ~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (352)
T cd08247 211 KLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGL 290 (352)
T ss_pred chHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcC
Confidence 2 2222 3689999999998555889999999 999999874211 0 0 0 000000
Q ss_pred -----e--e--echHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 288 -----N--I--GGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 288 -----~--~--~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
. . ...+.++++++++.++.+++.. +.|++++++++++.+.+++..||+++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 291 WSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred CCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 0 0 1124678899999999998754 8999999999999999988889999864
No 109
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=9.1e-32 Score=244.89 Aligned_cols=282 Identities=26% Similarity=0.357 Sum_probs=230.8
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccc
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~ 97 (344)
++.+++.+.+.|.+.+++|+||+.++++|+.|+....+..+ ...+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 12 ~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~-- 89 (323)
T cd05276 12 PEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALL-- 89 (323)
T ss_pred cccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEec--
Confidence 55677777777888999999999999999999988766543 334578999999999999999999999999997431
Q ss_pred cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccC
Q 019199 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (344)
Q Consensus 98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~ 177 (344)
.+|+|++|+.++++.++++|+++++.+++.++..+.++++++.....
T Consensus 90 ---------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~ 136 (323)
T cd05276 90 ---------------------------------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGG 136 (323)
T ss_pred ---------------------------------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcC
Confidence 24889999999999999999999999999999999999999887777
Q ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---h--cCCccEEEEC
Q 019199 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---L--GKSLDFIIDT 251 (344)
Q Consensus 178 ~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~--~~~~dvvid~ 251 (344)
+.++++|+|+|+ |++|++++++++..|++|+++++++++.+.+ +.+|++.+++....+.... . .+++|+++|+
T Consensus 137 ~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (323)
T cd05276 137 LKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEATGGRGVDVILDM 215 (323)
T ss_pred CCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEEC
Confidence 799999999997 9999999999999999999999988888888 6789888888766443322 2 2579999999
Q ss_pred CCCchhHHHHHHhcccCCEEEEEcCC--CccccCCcee-------e---eec----------hHhHHHHHHHHHhCCCcc
Q 019199 252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASL-------N---IGG----------TKDTQEMLEYCAAHKIYP 309 (344)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~-------~---~~~----------~~~~~~~~~~~~~g~~~~ 309 (344)
.|+.. +..++++++++|+++.+|.. ....++...+ . ... .+.++++++++.++++++
T Consensus 216 ~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (323)
T cd05276 216 VGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP 294 (323)
T ss_pred CchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC
Confidence 99876 88899999999999999864 1112221111 1 000 123567888898999876
Q ss_pred c-eEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 310 Q-IETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 310 ~-~~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
. ++.|++++++++++.+.+++..+|+++
T Consensus 295 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 295 VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 5 489999999999999998887888874
No 110
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.2e-31 Score=242.13 Aligned_cols=285 Identities=28% Similarity=0.426 Sum_probs=230.3
Q ss_pred CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (344)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~ 99 (344)
..+.+++++.|++.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|+.++.+++||+|+..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~-- 90 (325)
T cd08271 13 LQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL-- 90 (325)
T ss_pred ceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCC--
Confidence 378899999999999999999999999999988876654322346789999999999999999999999999754311
Q ss_pred CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (344)
Q Consensus 100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 179 (344)
...|++++|+.++.+.++++|++++..+++.+++.+.+|++++.+...++
T Consensus 91 ------------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~ 140 (325)
T cd08271 91 ------------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIE 140 (325)
T ss_pred ------------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCC
Confidence 13478999999999999999999999999999999999999998887779
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh--cCCccEEEECCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--GKSLDFIIDTAS 253 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~dvvid~~g 253 (344)
+|++++|+|+ |.+|++++++++..|++|+++. .+++.+.+ +++|++.+++...... +.+. .+++|+++++++
T Consensus 141 ~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 218 (325)
T cd08271 141 AGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYV-KSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVG 218 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHH-HHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCC
Confidence 9999999998 8999999999999999998876 56666666 6789988887765433 2222 257999999999
Q ss_pred CchhHHHHHHhcccCCEEEEEcCCCcc-ccCCce----ee---------ee-------chHhHHHHHHHHHhCCCccc-e
Q 019199 254 GDHPFDAYMSLLKVAGVYVLVGFPSKV-KFSPAS----LN---------IG-------GTKDTQEMLEYCAAHKIYPQ-I 311 (344)
Q Consensus 254 ~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~----~~---------~~-------~~~~~~~~~~~~~~g~~~~~-~ 311 (344)
+.. ...++++++++|+++.+|..... ....+. +. .. ..+.+.++++++.++.+.+. +
T Consensus 219 ~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 297 (325)
T cd08271 219 GET-AAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVI 297 (325)
T ss_pred cHh-HHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccc
Confidence 876 67799999999999998644110 111111 00 01 01345778899999998764 4
Q ss_pred EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 312 ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
+.|+++++.++++.+.+++..+|+++++
T Consensus 298 ~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 298 EVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred eEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 8899999999999999888889998863
No 111
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.5e-31 Score=240.71 Aligned_cols=282 Identities=26% Similarity=0.359 Sum_probs=230.4
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~ 98 (344)
...+.+.+.+.+.+.+++|+|++.++++|+.|+....+..+ ..+|.++|||++|+|+.+|++++++++||+|+...
T Consensus 11 ~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~--- 86 (320)
T cd05286 11 PEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP-LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG--- 86 (320)
T ss_pred ccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC-CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec---
Confidence 34456666777778999999999999999999988877554 24577899999999999999999999999997421
Q ss_pred CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (344)
Q Consensus 99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 178 (344)
..|++++|+.++.+.++++|++++..+++.+++...+++.++.....+
T Consensus 87 --------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 134 (320)
T cd05286 87 --------------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV 134 (320)
T ss_pred --------------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC
Confidence 147899999999999999999999999999999999999998887778
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEECC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~~ 252 (344)
++|++|+|+|+ |.+|++++++++.+|++|+++++++++.+.+ +++|++.+++....... .+.. +++|+++|++
T Consensus 135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 213 (320)
T cd05286 135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERVREITGGRGVDVVYDGV 213 (320)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECC
Confidence 99999999996 9999999999999999999999998888888 68999888877654332 2222 5799999999
Q ss_pred CCchhHHHHHHhcccCCEEEEEcCCCc--cccCC-------ceee-------eech----HhHHHHHHHHHhCCCccce-
Q 019199 253 SGDHPFDAYMSLLKVAGVYVLVGFPSK--VKFSP-------ASLN-------IGGT----KDTQEMLEYCAAHKIYPQI- 311 (344)
Q Consensus 253 g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~-------~~~~-------~~~~----~~~~~~~~~~~~g~~~~~~- 311 (344)
++. ....++++++++|+++.+|.... ..++. ..+. .... +.++++++++.++.+.+..
T Consensus 214 ~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (320)
T cd05286 214 GKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIG 292 (320)
T ss_pred CcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCccc
Confidence 986 48999999999999999986411 11111 1111 0111 3456788899999887654
Q ss_pred EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 312 ETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+.|++++++++++.+.+++..+|+++.
T Consensus 293 ~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 293 KRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred ceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 889999999999999998888999874
No 112
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=3e-31 Score=239.71 Aligned_cols=273 Identities=23% Similarity=0.346 Sum_probs=223.6
Q ss_pred cCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCcccc
Q 019199 29 RRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCN 107 (344)
Q Consensus 29 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~ 107 (344)
.|++.+++++||+.++++|+.|+..+.+..+ ...+|.++|||++|+|+++|+.++++++||+|+..+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 5778999999999999999999988877653 2356789999999999999999999999999975431
Q ss_pred CCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEE
Q 019199 108 DGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI 187 (344)
Q Consensus 108 ~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~ 187 (344)
...|+|++|+.++++.++++|++++..+++.++..+.+||.++. ...+++|++++|+
T Consensus 71 ----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~ 127 (303)
T cd08251 71 ----------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ 127 (303)
T ss_pred ----------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence 13588999999999999999999999999999999999999986 5566999999998
Q ss_pred CC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEECCCCchhHHHH
Q 019199 188 GL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIIDTASGDHPFDAY 261 (344)
Q Consensus 188 Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~~g~~~~~~~~ 261 (344)
|+ |.+|++++++++.+|++|+++++.+++.+.+ +++|.+.+++....+.. .+.. +++|+++|++++. ....+
T Consensus 128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~ 205 (303)
T cd08251 128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKG 205 (303)
T ss_pred cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHH
Confidence 76 9999999999999999999999998888888 68999988887654332 2222 5799999999765 48999
Q ss_pred HHhcccCCEEEEEcCCC---ccccC--Cc----eee--------ee----chHhHHHHHHHHHhCCCccc-eEEEeCccH
Q 019199 262 MSLLKVAGVYVLVGFPS---KVKFS--PA----SLN--------IG----GTKDTQEMLEYCAAHKIYPQ-IETIPIENV 319 (344)
Q Consensus 262 ~~~l~~~G~iv~~g~~~---~~~~~--~~----~~~--------~~----~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 319 (344)
+++++++|+++.+|... ...++ .+ .+. .. ..+.+.++++++.++.+++. ++.|+++++
T Consensus 206 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 285 (303)
T cd08251 206 LNCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDI 285 (303)
T ss_pred HHHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHH
Confidence 99999999999987541 11111 11 000 01 11346778899999998765 488999999
Q ss_pred HHHHHHHHcCCcceEEEE
Q 019199 320 NEALERLIKRDVKYRFVI 337 (344)
Q Consensus 320 ~~a~~~~~~~~~~gkvvi 337 (344)
+++++.+.+++..+|+++
T Consensus 286 ~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 286 GEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHhCCCcceEeC
Confidence 999999999888888874
No 113
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.2e-31 Score=241.49 Aligned_cols=281 Identities=26% Similarity=0.347 Sum_probs=225.2
Q ss_pred cceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199 23 SPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS 99 (344)
Q Consensus 23 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~ 99 (344)
++.+.+.|.+.++||+|++.++++|++|.....|..+ ....|..+|||++|+|+++|+++.++++||+|+..+..
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 7778899999999999999999999999988776542 12346789999999999999999999999999764321
Q ss_pred CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199 100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179 (344)
Q Consensus 100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~ 179 (344)
...|++++|+.++.+.++++|+++++.+++.+++.+.+||+++.....++
T Consensus 93 ------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 142 (319)
T cd08267 93 ------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVK 142 (319)
T ss_pred ------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCC
Confidence 13478999999999999999999999999999999999999998888779
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh--cCCccEEEECCCCc-
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL--GKSLDFIIDTASGD- 255 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~dvvid~~g~~- 255 (344)
+|++|+|+|+ |.+|++++++|+.+|++|++++++ ++.+.+ +++|.+.+++....+..... .+++|++++++++.
T Consensus 143 ~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~ 220 (319)
T cd08267 143 PGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELV-RSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSP 220 (319)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHH-HHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchH
Confidence 9999999998 999999999999999999998865 677777 78998888876543332222 25799999999853
Q ss_pred hhHHHHHHhcccCCEEEEEcCCCc---ccc-----CCc----eee----eechHhHHHHHHHHHhCCCccce-EEEeCcc
Q 019199 256 HPFDAYMSLLKVAGVYVLVGFPSK---VKF-----SPA----SLN----IGGTKDTQEMLEYCAAHKIYPQI-ETIPIEN 318 (344)
Q Consensus 256 ~~~~~~~~~l~~~G~iv~~g~~~~---~~~-----~~~----~~~----~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~ 318 (344)
......+..++++|+++.+|.... ... ... .+. ....+.++++++++.++.+++.. +.|++++
T Consensus 221 ~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 300 (319)
T cd08267 221 FSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLED 300 (319)
T ss_pred HHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHH
Confidence 223444445999999999986511 111 000 000 11256789999999999987654 8999999
Q ss_pred HHHHHHHHHcCCcceEEEE
Q 019199 319 VNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 319 ~~~a~~~~~~~~~~gkvvi 337 (344)
++++++.+.+++..+|+++
T Consensus 301 i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 301 APEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHHHhcCCCCCcEeC
Confidence 9999999999887888874
No 114
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.4e-31 Score=239.24 Aligned_cols=296 Identities=25% Similarity=0.339 Sum_probs=233.9
Q ss_pred eeeeecC--CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199 11 LGWAARD--PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV 87 (344)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~ 87 (344)
++++..+ .++.+++++.+.|.+.+++|+|++.++++|++|.....+... ....|.++|||++|+|+++|++++.|++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 81 (326)
T cd08272 2 KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFRV 81 (326)
T ss_pred eEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Confidence 3444432 234477777888889999999999999999999988766543 2335778999999999999999999999
Q ss_pred CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199 88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167 (344)
Q Consensus 88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t 167 (344)
||+|+.... +. . ...|+|++|+.++++.++++|++++..+++.+++.+.+
T Consensus 82 Gd~V~~~~~--------------------------~~--~--~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~ 131 (326)
T cd08272 82 GDEVYGCAG--------------------------GL--G--GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGIT 131 (326)
T ss_pred CCEEEEccC--------------------------Cc--C--CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHH
Confidence 999974320 00 0 13578999999999999999999999999999999999
Q ss_pred hHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc--
Q 019199 168 VYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG-- 242 (344)
Q Consensus 168 a~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~-- 242 (344)
||+++.+...+++|++++|+|+ |.+|++++++++.+|++|+.+++. ++.+.+ +++|.+.+++.... +.+.+..
T Consensus 132 a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 209 (326)
T cd08272 132 AWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPIIYYRETVVEYVAEHTGG 209 (326)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEEEecchhHHHHHHHhcCC
Confidence 9999877778899999999986 999999999999999999999888 888877 67998888876654 1222222
Q ss_pred CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCcccc-----CCceee--e------------echHhHHHHHHHHH
Q 019199 243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKF-----SPASLN--I------------GGTKDTQEMLEYCA 303 (344)
Q Consensus 243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~-----~~~~~~--~------------~~~~~~~~~~~~~~ 303 (344)
+++|+++|++++.. ...++++++++|+++.+|......+ ....+. . ...+.++.+++++.
T Consensus 210 ~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 288 (326)
T cd08272 210 RGFDVVFDTVGGET-LDASFEAVALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVE 288 (326)
T ss_pred CCCcEEEECCChHH-HHHHHHHhccCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHH
Confidence 47999999999865 8899999999999999874310000 000111 0 01346788889999
Q ss_pred hCCCccc-e-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 304 AHKIYPQ-I-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 304 ~g~~~~~-~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++.+.+. . +.|++++++++++.+.+++..+|+++++
T Consensus 289 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 289 RGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred CCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 9998765 3 8899999999999999888789999864
No 115
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=4.7e-31 Score=241.83 Aligned_cols=278 Identities=21% Similarity=0.209 Sum_probs=220.6
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEec
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~ 95 (344)
++.+++++.+.|++.+++|+||+.++++|+.|.....+... ....+.++|+|++|+|+++|+. +|++||+|+.
T Consensus 17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~-- 92 (329)
T cd05288 17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG-- 92 (329)
T ss_pred ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec--
Confidence 45688889999999999999999999999988655444321 1123467899999999999964 7999999962
Q ss_pred cccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEec-ceEEEcCCCCC--cccccc-cchhhhHhHHH
Q 019199 96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKIANDYP--LALAAP-LLCAGITVYTP 171 (344)
Q Consensus 96 ~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~P~~~~--~~~aa~-l~~~~~ta~~~ 171 (344)
.++|++|+.++. +.++++|++++ ..+++. +++.+.|||++
T Consensus 93 ------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~ 136 (329)
T cd05288 93 ------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFG 136 (329)
T ss_pred ------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHH
Confidence 247999999999 99999999995 444544 89999999999
Q ss_pred HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---h-cCCcc
Q 019199 172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---L-GKSLD 246 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~-~~~~d 246 (344)
+.....+.+|++|||+|+ |.+|++++++++..|++|+++++++++.+.+.+.+|++.+++.++.+.... . .+++|
T Consensus 137 l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d 216 (329)
T cd05288 137 LTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGID 216 (329)
T ss_pred HHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCce
Confidence 988777799999999996 999999999999999999999999988888843399999888876543322 2 36799
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEEcCCCc--c-c----cCC-------ceee---eec-----hHhHHHHHHHHHh
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK--V-K----FSP-------ASLN---IGG-----TKDTQEMLEYCAA 304 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~-~----~~~-------~~~~---~~~-----~~~~~~~~~~~~~ 304 (344)
+++|++|+. .+..++++++++|+++.+|.... . . ++. ..+. ... .+.+.++++++.+
T Consensus 217 ~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (329)
T cd05288 217 VYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAE 295 (329)
T ss_pred EEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHC
Confidence 999999986 49999999999999999986511 1 0 000 0100 111 1457788899999
Q ss_pred CCCccc-eEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 305 HKIYPQ-IETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 305 g~~~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
+.+++. ...+++++++++++.+.+++..||+++
T Consensus 296 g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 296 GKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred CCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 999764 467899999999999998888888874
No 116
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=7.7e-31 Score=237.57 Aligned_cols=283 Identities=26% Similarity=0.378 Sum_probs=229.5
Q ss_pred CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96 (344)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~ 96 (344)
..+++++.+.|.+++++|+||+.++++|++|+....|... ...+|.++|||++|+|+.+|+++..+++||+|+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~ 92 (309)
T cd05289 13 EVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTP 92 (309)
T ss_pred cceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccC
Confidence 3355667777889999999999999999999988776542 2345789999999999999999999999999975431
Q ss_pred ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199 97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176 (344)
Q Consensus 97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~ 176 (344)
. ...|+|++|+.++...++++|+++++..++.+++.+.++++++....
T Consensus 93 ~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~ 140 (309)
T cd05289 93 F--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELG 140 (309)
T ss_pred C--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhc
Confidence 0 12488999999999999999999999999999999999999998888
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH-hcCCccEEEECCCC
Q 019199 177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA-LGKSLDFIIDTASG 254 (344)
Q Consensus 177 ~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~-~~~~~dvvid~~g~ 254 (344)
.+.+|++++|+|+ |.+|++++++++..|++|+++++++ +.+.+ +.+|.+.+++....+.... ..+++|+++|++++
T Consensus 141 ~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~ 218 (309)
T cd05289 141 GLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFL-RSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGG 218 (309)
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHH-HHcCCCEEEeCCCCchhhccCCCCceEEEECCch
Confidence 7799999999997 9999999999999999999888777 77666 6789888887665433221 22579999999998
Q ss_pred chhHHHHHHhcccCCEEEEEcCCCcccc---C-Cceee---e-echHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHH
Q 019199 255 DHPFDAYMSLLKVAGVYVLVGFPSKVKF---S-PASLN---I-GGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALER 325 (344)
Q Consensus 255 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~---~-~~~~~---~-~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~ 325 (344)
.. ...++++++++|+++.+|....... . ...+. . ...+.++++++++.++.+++.+ +.|++++++++++.
T Consensus 219 ~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 297 (309)
T cd05289 219 ET-LARSLALVKPGGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHER 297 (309)
T ss_pred HH-HHHHHHHHhcCcEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHH
Confidence 85 8999999999999999986521110 0 01111 1 1156788999999999987654 89999999999999
Q ss_pred HHcCCcceEEEE
Q 019199 326 LIKRDVKYRFVI 337 (344)
Q Consensus 326 ~~~~~~~gkvvi 337 (344)
+.+++..+|+++
T Consensus 298 ~~~~~~~~kvv~ 309 (309)
T cd05289 298 LESGHARGKVVL 309 (309)
T ss_pred HHhCCCCCcEeC
Confidence 998887788774
No 117
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=7.8e-31 Score=233.21 Aligned_cols=229 Identities=32% Similarity=0.502 Sum_probs=196.6
Q ss_pred cEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCC
Q 019199 36 DVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC 114 (344)
Q Consensus 36 evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c 114 (344)
||+|++.++++|+.|+....|..+ ...+|.++|||++|+|+++|+.++.|++||+|+..+.. .|+.|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNL-GCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCC-CCCCCHHHHh----hC
Confidence 689999999999999998887654 34567899999999999999999999999999877654 8999999997 56
Q ss_pred CccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHH
Q 019199 115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGH 194 (344)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~ 194 (344)
....+. +....|++++|+.++.+.++++|+++++.+++.+++.+.|||+++.....+++|++|||+|+|++|+
T Consensus 76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~ 148 (271)
T cd05188 76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL 148 (271)
T ss_pred CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 544321 2234689999999999999999999999999999999999999998888889999999999866999
Q ss_pred HHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh----cCCccEEEECCCCchhHHHHHHhcccCCE
Q 019199 195 MAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL----GKSLDFIIDTASGDHPFDAYMSLLKVAGV 270 (344)
Q Consensus 195 ~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~dvvid~~g~~~~~~~~~~~l~~~G~ 270 (344)
+++++++..|.+|+++++++++.+.+ +++|++.+++..+.+....+ .+++|+++++++.......++++++++|+
T Consensus 149 ~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 149 LAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 99999999999999999998888887 67888888877654333322 36799999999984459999999999999
Q ss_pred EEEEcCC
Q 019199 271 YVLVGFP 277 (344)
Q Consensus 271 iv~~g~~ 277 (344)
++.+|..
T Consensus 228 ~v~~~~~ 234 (271)
T cd05188 228 IVVVGGT 234 (271)
T ss_pred EEEEccC
Confidence 9999865
No 118
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.98 E-value=4.6e-30 Score=234.13 Aligned_cols=284 Identities=24% Similarity=0.344 Sum_probs=229.4
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccc
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~ 97 (344)
+..+.+.+.+.|.+.+++++||+.++++|++|+....+... ...+|.++|||++|+|+.+|+.+.++++||+|+...
T Consensus 12 ~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~-- 89 (325)
T TIGR02824 12 PEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV-- 89 (325)
T ss_pred cccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEcc--
Confidence 44466666666778999999999999999999887766543 123468899999999999999999999999997421
Q ss_pred cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccC
Q 019199 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (344)
Q Consensus 98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~ 177 (344)
.+|++++|+.++...++++|++++..+++++++.+.|+|.++.....
T Consensus 90 ---------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~ 136 (325)
T TIGR02824 90 ---------------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGG 136 (325)
T ss_pred ---------------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcC
Confidence 23789999999999999999999999999999999999999877778
Q ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---hc--CCccEEEEC
Q 019199 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---LG--KSLDFIIDT 251 (344)
Q Consensus 178 ~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~--~~~dvvid~ 251 (344)
+++|++++|+|+ |++|++++++++.+|++|+++++++++.+.+ +++|.+.+++....+.... .. +++|+++++
T Consensus 137 ~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 215 (325)
T TIGR02824 137 LKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADIAINYREEDFVEVVKAETGGKGVDVILDI 215 (325)
T ss_pred CCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEEC
Confidence 899999999997 9999999999999999999999988888877 6899888877665443322 22 479999999
Q ss_pred CCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-------e---eec----------hHhHHHHHHHHHhCCCcc
Q 019199 252 ASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-------N---IGG----------TKDTQEMLEYCAAHKIYP 309 (344)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-------~---~~~----------~~~~~~~~~~~~~g~~~~ 309 (344)
+++.. +..++++++++|+++.+|... ...++...+ . ... ...+.++++++.++.+++
T Consensus 216 ~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (325)
T TIGR02824 216 VGGSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP 294 (325)
T ss_pred CchHH-HHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC
Confidence 99864 889999999999999998541 112221111 0 011 123466778898998876
Q ss_pred c-eEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 310 Q-IETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 310 ~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
. ++.|++++++++++.+.++...+|+++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 295 VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 4 48899999999999999888889999864
No 119
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=7.6e-30 Score=232.99 Aligned_cols=288 Identities=23% Similarity=0.333 Sum_probs=228.6
Q ss_pred CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccc
Q 019199 19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV 97 (344)
Q Consensus 19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~ 97 (344)
...+++.+.+.|.+.+++++|++.++++|+.|.....+... ...+|.++|||++|+|+.+|++++.|++||+|+.++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~ 91 (328)
T cd08268 12 PEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAA 91 (328)
T ss_pred cceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEecccc
Confidence 34566677777889999999999999999999887766543 22447789999999999999999999999999764310
Q ss_pred cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccC
Q 019199 98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177 (344)
Q Consensus 98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~ 177 (344)
+....|++++|+.++.+.++++|++++..+++.+++.+.++|.++.....
T Consensus 92 ------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~ 141 (328)
T cd08268 92 ------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAG 141 (328)
T ss_pred ------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcC
Confidence 01234889999999999999999999999999999999999999887777
Q ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEEC
Q 019199 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIIDT 251 (344)
Q Consensus 178 ~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~ 251 (344)
+.++++++|+|+ |.+|++++++++..|+++++++.++++.+.+ +++|.+.+++.+..... .+.. +++|+++++
T Consensus 142 ~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 142 LRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 789999999997 9999999999999999999999888888887 67898888877653322 2222 479999999
Q ss_pred CCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCc-------eee---ee----ch----HhHHHHHHHHHhCCCccc-
Q 019199 252 ASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPA-------SLN---IG----GT----KDTQEMLEYCAAHKIYPQ- 310 (344)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~-------~~~---~~----~~----~~~~~~~~~~~~g~~~~~- 310 (344)
+++.. ...++++++++|+++.+|... ...++.. .+. .. .. +.++.+.+++.++.+.+.
T Consensus 221 ~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (328)
T cd08268 221 VGGPQ-FAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVV 299 (328)
T ss_pred CchHh-HHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 99865 899999999999999998541 1111111 100 11 11 234555666778888765
Q ss_pred eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199 311 IETIPIENVNEALERLIKRDVKYRFVID 338 (344)
Q Consensus 311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 338 (344)
+..|+++++.++++.+.+++..+|++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 300 DRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred ccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 4889999999999999988888999875
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=2.7e-29 Score=225.12 Aligned_cols=263 Identities=25% Similarity=0.328 Sum_probs=216.5
Q ss_pred CcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCC
Q 019199 35 DDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC 114 (344)
Q Consensus 35 ~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c 114 (344)
+||+||+.++++|++|+....|.. ..+|.++|||++|+|+++|+.+..+++||+|+.+.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887654 24578999999999999999999999999997532
Q ss_pred CccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHH
Q 019199 115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLG 193 (344)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G 193 (344)
.|+|++|+.++.+.++++|+++++.+++.+++.+.|++.++.....+++|++|+|+|+ |.+|
T Consensus 60 -----------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g 122 (293)
T cd05195 60 -----------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG 122 (293)
T ss_pred -----------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence 3789999999999999999999999999999999999999877777799999999986 9999
Q ss_pred HHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--CcEEEeCCCHHHHHH---h--cCCccEEEECCCCchhHHHHHHhcc
Q 019199 194 HMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--ADKFVVSSDLEQMKA---L--GKSLDFIIDTASGDHPFDAYMSLLK 266 (344)
Q Consensus 194 ~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~---~--~~~~dvvid~~g~~~~~~~~~~~l~ 266 (344)
++++++++.+|++|+++++++++.+.+ +..| ++.+++....+...+ . .+++|+++|++++. .+..++++++
T Consensus 123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~ 200 (293)
T cd05195 123 QAAIQLAQHLGAEVFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA 200 (293)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc
Confidence 999999999999999999988888888 4666 677887765443322 2 25799999999988 5999999999
Q ss_pred cCCEEEEEcCCCc-----cccCCce----eee------------echHhHHHHHHHHHhCCCccce-EEEeCccHHHHHH
Q 019199 267 VAGVYVLVGFPSK-----VKFSPAS----LNI------------GGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALE 324 (344)
Q Consensus 267 ~~G~iv~~g~~~~-----~~~~~~~----~~~------------~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~ 324 (344)
++|+++.+|.... .....+. +.. ...+.+.++++++.++.+++.. ..+++++++++++
T Consensus 201 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 280 (293)
T cd05195 201 PFGRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFR 280 (293)
T ss_pred cCceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHH
Confidence 9999999986511 1111111 110 0123567888999999998754 7899999999999
Q ss_pred HHHcCCcceEEEE
Q 019199 325 RLIKRDVKYRFVI 337 (344)
Q Consensus 325 ~~~~~~~~gkvvi 337 (344)
.+.+++..+|+++
T Consensus 281 ~~~~~~~~~~ivv 293 (293)
T cd05195 281 LMQSGKHIGKVVL 293 (293)
T ss_pred HHhcCCCCceecC
Confidence 9999888888874
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=7.7e-29 Score=227.54 Aligned_cols=282 Identities=29% Similarity=0.396 Sum_probs=222.5
Q ss_pred CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199 20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98 (344)
Q Consensus 20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~ 98 (344)
..+.+.+.+.|+|.+++|+||+.++++|+.|+....+... ....|.++|||++|+|+.+|++++++++||+|+.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~--- 88 (337)
T cd08275 12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT--- 88 (337)
T ss_pred cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec---
Confidence 4567777777889999999999999999999988776543 234577899999999999999999999999997532
Q ss_pred CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199 99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178 (344)
Q Consensus 99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~ 178 (344)
..|+|++|+.++.+.++++|++++..+++.+++.+.++|+++.....+
T Consensus 89 --------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 136 (337)
T cd08275 89 --------------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL 136 (337)
T ss_pred --------------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC
Confidence 237899999999999999999999999999999999999998877778
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhCCCcEEEeCCCHHH---HHHh-cCCccEEEECC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKFVVSSDLEQ---MKAL-GKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~-~~~~dvvid~~ 252 (344)
++|++|+|+|+ |.+|++++++++.+ ..+.++.. .+++.+.+ +.+|.+.+++....+. +.+. .+++|+++|++
T Consensus 137 ~~~~~vli~g~~g~~g~~~~~~a~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~ 214 (337)
T cd08275 137 RPGQSVLVHSAAGGVGLAAGQLCKTV-PNVTVVGTASASKHEAL-KENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDAL 214 (337)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHc-cCcEEEEeCCHHHHHHH-HHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECC
Confidence 99999999998 99999999999998 32223322 34466666 6789888887765332 2222 36799999999
Q ss_pred CCchhHHHHHHhcccCCEEEEEcCCC---ccccC----------------------Cceee---ee----c----hHhHH
Q 019199 253 SGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFS----------------------PASLN---IG----G----TKDTQ 296 (344)
Q Consensus 253 g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~----------------------~~~~~---~~----~----~~~~~ 296 (344)
|+.. ...++++++++|+++.+|... ...+. ...+. .. . ...+.
T Consensus 215 g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (337)
T cd08275 215 GGED-TRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMD 293 (337)
T ss_pred cHHH-HHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHH
Confidence 9865 899999999999999998541 11111 00000 00 0 12467
Q ss_pred HHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199 297 EMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339 (344)
Q Consensus 297 ~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 339 (344)
++++++.++.+.+.. +.|++++++++++.+.+++..+|+++.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 294 KLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 788899999987754 8899999999999999988889999863
No 122
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=6e-29 Score=226.43 Aligned_cols=282 Identities=30% Similarity=0.487 Sum_probs=226.9
Q ss_pred CCCCccceeeccCCCC-CCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEec
Q 019199 18 PSGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95 (344)
Q Consensus 18 ~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~ 95 (344)
.+..+++.+.+ |.+. +++++|++.++++|++|+....+... ....|.++|||++|+|+.+|++++.+++||+|+..+
T Consensus 11 ~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~ 89 (323)
T cd08241 11 GPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALT 89 (323)
T ss_pred CcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec
Confidence 34556666666 6665 59999999999999999988776543 223466899999999999999999999999997532
Q ss_pred cccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc
Q 019199 96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH 175 (344)
Q Consensus 96 ~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~ 175 (344)
..|++++|+.++.+.++++|++++..+++.+...+.+|+.++...
T Consensus 90 -----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~ 134 (323)
T cd08241 90 -----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRR 134 (323)
T ss_pred -----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHh
Confidence 147899999999999999999999999988999999999998766
Q ss_pred cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEEE
Q 019199 176 KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFII 249 (344)
Q Consensus 176 ~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvvi 249 (344)
..+.+|++++|+|+ |.+|++++++++..|++|++++.++++.+.+ +++|++.+++....+. +.+.. +++|+++
T Consensus 135 ~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~ 213 (323)
T cd08241 135 ARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADHVIDYRDPDLRERVKALTGGRGVDVVY 213 (323)
T ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCceeeecCCccHHHHHHHHcCCCCcEEEE
Confidence 77799999999998 9999999999999999999999998888888 6789888887665433 22232 5799999
Q ss_pred ECCCCchhHHHHHHhcccCCEEEEEcCC-Cccc-cCC-------ceee---ee---------chHhHHHHHHHHHhCCCc
Q 019199 250 DTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVK-FSP-------ASLN---IG---------GTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~-~~~-------~~~~---~~---------~~~~~~~~~~~~~~g~~~ 308 (344)
+++|+.. ...++++++++|+++.+|.. .... +.. ..+. .. ..+.++++++++.++.++
T Consensus 214 ~~~g~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (323)
T cd08241 214 DPVGGDV-FEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR 292 (323)
T ss_pred ECccHHH-HHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence 9999854 88999999999999999864 1111 111 1111 00 124578899999999887
Q ss_pred cce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 309 PQI-ETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 309 ~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
+.. +.|+++++.++++.+.++...+|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv 322 (323)
T cd08241 293 PHVSAVFPLEQAAEALRALADRKATGKVVL 322 (323)
T ss_pred cccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 654 88999999999999998887889886
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=1.9e-28 Score=219.47 Aligned_cols=258 Identities=24% Similarity=0.379 Sum_probs=211.0
Q ss_pred EEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccc
Q 019199 39 ITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSV 118 (344)
Q Consensus 39 V~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~ 118 (344)
||+.++++|++|+....|..+ .|.++|||++|+|+++|+.++.|++||+|+.+.
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999988876543 357899999999999999999999999997532
Q ss_pred cccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHH
Q 019199 119 YTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAV 197 (344)
Q Consensus 119 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai 197 (344)
.|+|++|+.++.+.++++|+++++.+++.+++.+.+++.++.....+.+|++|+|+|+ |.+|++++
T Consensus 56 -------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~ 122 (288)
T smart00829 56 -------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI 122 (288)
T ss_pred -------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence 3789999999999999999999999999999999999999867677799999999986 99999999
Q ss_pred HHHHHCCCeEEEEeCCchhHHHHHHhCCC--cEEEeCCCHHHHH---Hh--cCCccEEEECCCCchhHHHHHHhcccCCE
Q 019199 198 KFGKAFGLNVTVLSTSTSKKEEALSLLGA--DKFVVSSDLEQMK---AL--GKSLDFIIDTASGDHPFDAYMSLLKVAGV 270 (344)
Q Consensus 198 ~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~~~~---~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~ 270 (344)
++++.+|++|+++++++++.+.+ +++|+ +.+++..+.+..+ +. .+++|+++|++++. .+..++++++++|+
T Consensus 123 ~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~ 200 (288)
T smart00829 123 QLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGR 200 (288)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcE
Confidence 99999999999999999998888 68997 7778766544332 22 24799999999965 48899999999999
Q ss_pred EEEEcCCC---ccccCCcee------ee--------e---chHhHHHHHHHHHhCCCccc-eEEEeCccHHHHHHHHHcC
Q 019199 271 YVLVGFPS---KVKFSPASL------NI--------G---GTKDTQEMLEYCAAHKIYPQ-IETIPIENVNEALERLIKR 329 (344)
Q Consensus 271 iv~~g~~~---~~~~~~~~~------~~--------~---~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~a~~~~~~~ 329 (344)
++.+|... ...++...+ .. . ..+.+..+++++.++.+.+. ++.|++++++++++.+..+
T Consensus 201 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (288)
T smart00829 201 FVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQG 280 (288)
T ss_pred EEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcC
Confidence 99998541 112221111 00 0 11346778888989988764 4889999999999999988
Q ss_pred CcceEEEE
Q 019199 330 DVKYRFVI 337 (344)
Q Consensus 330 ~~~gkvvi 337 (344)
+..+|+++
T Consensus 281 ~~~~~ivv 288 (288)
T smart00829 281 KHIGKVVL 288 (288)
T ss_pred CCcceEeC
Confidence 77788764
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=1.1e-26 Score=198.00 Aligned_cols=270 Identities=20% Similarity=0.199 Sum_probs=210.5
Q ss_pred CCCCCCcEEEEEeeeecccchhhhhcCCCCCC-CCCC-----CcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCC
Q 019199 30 RAVGSDDVSITITHCGVCYADVIWTRNKHGDS-KYPL-----VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDC 103 (344)
Q Consensus 30 p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~p~-----~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c 103 (344)
.++.+++||||..|.+..|.....+....+.. -.|. +.| .++|+|++ |...+|++||.|...
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~--S~~~~~~~GD~v~g~--------- 100 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVID--SGHPNYKKGDLVWGI--------- 100 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEe--cCCCCCCcCceEEEe---------
Confidence 34699999999999999887765443322211 1122 233 77999999 466889999999531
Q ss_pred ccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce--EEEcCC--CCCccccc-ccchhhhHhHHHHHhccCC
Q 019199 104 EYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY--CYKIAN--DYPLALAA-PLLCAGITVYTPMMRHKMN 178 (344)
Q Consensus 104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~P~--~~~~~~aa-~l~~~~~ta~~~l~~~~~~ 178 (344)
=+|.||.++++.. .+++|. ++++.-.. .+..+..|||..+.+....
T Consensus 101 -----------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p 151 (343)
T KOG1196|consen 101 -----------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP 151 (343)
T ss_pred -----------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence 2699999887654 556554 44444443 6888899999999999988
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH-H---HHHh-cCCccEEEECC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE-Q---MKAL-GKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-~---~~~~-~~~~dvvid~~ 252 (344)
+.|++|+|-|| |++|+.+.|+|+.+||+|+.++.++|+...+..++|.+..||+.++. . +++. ..++|+.||.+
T Consensus 152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV 231 (343)
T KOG1196|consen 152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV 231 (343)
T ss_pred CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence 99999999987 99999999999999999999999999999998889999999998763 2 2222 37999999999
Q ss_pred CCchhHHHHHHhcccCCEEEEEcCCC----ccc--cCCceee----------------eechHhHHHHHHHHHhCCCccc
Q 019199 253 SGDHPFDAYMSLLKVAGVYVLVGFPS----KVK--FSPASLN----------------IGGTKDTQEMLEYCAAHKIYPQ 310 (344)
Q Consensus 253 g~~~~~~~~~~~l~~~G~iv~~g~~~----~~~--~~~~~~~----------------~~~~~~~~~~~~~~~~g~~~~~ 310 (344)
|+.. ++.++..|+..||++.+|+-. ..+ +...... ....+.++++..++++|+|+-.
T Consensus 232 GG~~-lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ 310 (343)
T KOG1196|consen 232 GGKM-LDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYV 310 (343)
T ss_pred CcHH-HHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEe
Confidence 9998 999999999999999999751 111 1111111 2223567889999999999876
Q ss_pred eEEE-eCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199 311 IETI-PIENVNEALERLIKRDVKYRFVIDIQN 341 (344)
Q Consensus 311 ~~~~-~~~~~~~a~~~~~~~~~~gkvvi~~~~ 341 (344)
..++ .+|+.++||..|.++++.||-++.+..
T Consensus 311 edi~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 311 EDIADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred hhHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence 5443 699999999999999999999998864
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=8.9e-26 Score=201.95 Aligned_cols=233 Identities=26% Similarity=0.376 Sum_probs=186.7
Q ss_pred CCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEE
Q 019199 61 SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIV 140 (344)
Q Consensus 61 ~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~ 140 (344)
.++|.++|||++|+|+++|+++++|++||+|+.. +.|++|++
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------~~~~~~~~ 59 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF--------------------------------------GPHAERVV 59 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec--------------------------------------CCcceEEE
Confidence 4578999999999999999999999999999642 35899999
Q ss_pred EecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHH
Q 019199 141 VHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEE 219 (344)
Q Consensus 141 ~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~ 219 (344)
++.+.++++|+++++.+++.+ +.+.|||+++. ...+++|++++|+|+|.+|++++++|+.+|++ |+++++++++.+.
T Consensus 60 v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~ 137 (277)
T cd08255 60 VPANLLVPLPDGLPPERAALT-ALAATALNGVR-DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARREL 137 (277)
T ss_pred cCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHH
Confidence 999999999999999999888 78999999986 45669999999998899999999999999997 9999999998886
Q ss_pred HHHhCC-CcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccc------cC--Cceee--
Q 019199 220 ALSLLG-ADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVK------FS--PASLN-- 288 (344)
Q Consensus 220 ~~~~~g-~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~------~~--~~~~~-- 288 (344)
+ +++| ++.+++.... .. ..+++|++||+++........+++++++|+++.+|...... +. ...+.
T Consensus 138 ~-~~~g~~~~~~~~~~~-~~--~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 213 (277)
T cd08255 138 A-EALGPADPVAADTAD-EI--GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSS 213 (277)
T ss_pred H-HHcCCCccccccchh-hh--cCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEee
Confidence 6 6888 5655543321 11 23579999999887666899999999999999998651111 00 00111
Q ss_pred -ee------------chHhHHHHHHHHHhCCCccc-eEEEeCccHHHHHHHHHcC-CcceEEEE
Q 019199 289 -IG------------GTKDTQEMLEYCAAHKIYPQ-IETIPIENVNEALERLIKR-DVKYRFVI 337 (344)
Q Consensus 289 -~~------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~a~~~~~~~-~~~gkvvi 337 (344)
.. ..+.++++++++.++.+++. .+.|++++++++++.+.++ ....|+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 214 QVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 00 12568899999999998775 4889999999999999887 33467764
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.93 E-value=1.2e-25 Score=218.36 Aligned_cols=277 Identities=16% Similarity=0.204 Sum_probs=223.0
Q ss_pred CCccceeeccC---CCCCCcEEEEEeeeecccchhhhhcCCCCCCCCC-------CCcccccceEEEEecCCCCCCCCCC
Q 019199 20 GVLSPYSFNRR---AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYP-------LVPGHEIVGIVKEVGHNVSRFKVGD 89 (344)
Q Consensus 20 ~~~~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~~~G~e~~G~V~~~G~~~~~~~~Gd 89 (344)
..++|.+.+.. +..++.=+-.|-|+.+|..|+....|+.+...+| .++|-||+|+ ..-|.
T Consensus 1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGR 1496 (2376)
T ss_pred cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCc
Confidence 34555555554 3477778999999999999999999988644443 5789999997 45699
Q ss_pred EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199 90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY 169 (344)
Q Consensus 90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~ 169 (344)
||... ...-++++.+.++.+.+|.+|++.++++|++.||.+.|||
T Consensus 1497 RvM~m-----------------------------------vpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaY 1541 (2376)
T KOG1202|consen 1497 RVMGM-----------------------------------VPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAY 1541 (2376)
T ss_pred EEEEe-----------------------------------eehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeeh
Confidence 99743 2345789999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCEEEEEC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC---CcEEEeCCCHHHH---HH--
Q 019199 170 TPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---ADKFVVSSDLEQM---KA-- 240 (344)
Q Consensus 170 ~~l~~~~~~~~g~~vlI~G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~~---~~-- 240 (344)
+++...++.++|+++||++ +|++|++||.+|.+.|++|+-++.+.|+++.+++.|+ ...+-|.++.++. ..
T Consensus 1542 YALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T 1621 (2376)
T KOG1202|consen 1542 YALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHT 1621 (2376)
T ss_pred hhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHh
Confidence 9999999999999999985 5999999999999999999999999999999988887 3444455543321 11
Q ss_pred hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCceee--------------eechHhHHHHHHHHH
Q 019199 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLN--------------IGGTKDTQEMLEYCA 303 (344)
Q Consensus 241 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 303 (344)
.++|+|+|+|....+. ++..++||+..||+..+|-. .+.++.+.-+. .+..+++.++..+++
T Consensus 1622 ~GrGVdlVLNSLaeEk-LQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~ 1700 (2376)
T KOG1202|consen 1622 KGRGVDLVLNSLAEEK-LQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVA 1700 (2376)
T ss_pred cCCCeeeehhhhhHHH-HHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHH
Confidence 2479999999999887 99999999999999999865 33333333222 444567888877776
Q ss_pred hC----CCccc-eEEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199 304 AH----KIYPQ-IETIPIENVNEALERLIKRDVKYRFVIDIQNS 342 (344)
Q Consensus 304 ~g----~~~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~ 342 (344)
+| ..+|. .++|+-.++++||++|.++++.||||+++-.+
T Consensus 1701 eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1701 EGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred hhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence 65 44565 48999999999999999999999999998643
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=4.9e-23 Score=157.69 Aligned_cols=108 Identities=34% Similarity=0.657 Sum_probs=92.4
Q ss_pred CCcEEEEEeeeecccchhhhhcCC-CCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCC
Q 019199 34 SDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEV 112 (344)
Q Consensus 34 ~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~ 112 (344)
|+||+||+.++|||++|++.+.|. .....+|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|..+.++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence 689999999999999999999983 4467889999999999999999999999999999887765 59999999999999
Q ss_pred CCCccccccccccCCCCccCCcceeEEEEecceEEEc
Q 019199 113 HCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149 (344)
Q Consensus 113 ~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 149 (344)
.|.+.... +...+|+|+||+.+++++++|+
T Consensus 80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence 99775332 2236799999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.50 E-value=1.4e-13 Score=108.70 Aligned_cols=113 Identities=32% Similarity=0.456 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEEEECCCCchhHHHHHHhc
Q 019199 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDTASGDHPFDAYMSLL 265 (344)
Q Consensus 191 ~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvvid~~g~~~~~~~~~~~l 265 (344)
++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++.+. +.+.+ +++|++|||+|++..++.+++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~-~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA-KELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHH-HhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 589999999999999999999999999888 7999999999987643 44444 37999999999888899999999
Q ss_pred ccCCEEEEEcCCC--ccccCCceee----------eechHhHHHHHHHHHh
Q 019199 266 KVAGVYVLVGFPS--KVKFSPASLN----------IGGTKDTQEMLEYCAA 304 (344)
Q Consensus 266 ~~~G~iv~~g~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 304 (344)
+++|+++.+|... ...++...+. ...+++++++++++++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999874 3333333332 2334788888887753
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.39 E-value=4e-13 Score=105.57 Aligned_cols=111 Identities=30% Similarity=0.389 Sum_probs=76.6
Q ss_pred CCCcEEEeCCCHHHHHHhcCCccEEEECCC--CchhHHHHHHhcccCCEEEEEcCC----Cc-cccCCceee-ee-----
Q 019199 224 LGADKFVVSSDLEQMKALGKSLDFIIDTAS--GDHPFDAYMSLLKVAGVYVLVGFP----SK-VKFSPASLN-IG----- 290 (344)
Q Consensus 224 ~g~~~~v~~~~~~~~~~~~~~~dvvid~~g--~~~~~~~~~~~l~~~G~iv~~g~~----~~-~~~~~~~~~-~~----- 290 (344)
+|+++++|+++.+. .-.+++|+|||++| ....+..++++| ++|+++.++.. .. ......... ..
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPN 77 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--H
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCC
Confidence 68999999997666 33578999999999 555346677778 99999999841 00 001111111 11
Q ss_pred --chHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199 291 --GTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVI 337 (344)
Q Consensus 291 --~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi 337 (344)
..+.++++.+++++|+++|++ ++||++++.+|++.+.+++..||+||
T Consensus 78 ~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 78 AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 234599999999999999988 79999999999999999999999996
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.30 E-value=2.2e-11 Score=113.03 Aligned_cols=162 Identities=15% Similarity=0.126 Sum_probs=119.3
Q ss_pred HHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199 169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF 247 (344)
Q Consensus 169 ~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv 247 (344)
+.++.+. +...+|++|+|+|+|.+|+.+++.++.+|++|++++.++.|+..+ +.+|++.+ +. .+..+++|+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~-~~------~e~v~~aDV 260 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVM-TM------EEAVKEGDI 260 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEc-cH------HHHHcCCCE
Confidence 5555554 444789999999999999999999999999999999999998888 68898543 21 122356899
Q ss_pred EEECCCCchhHHHH-HHhcccCCEEEEEcCCCccccCCceee------e---ec--hHhHH--HHHHHHHhCCC-c--cc
Q 019199 248 IIDTASGDHPFDAY-MSLLKVAGVYVLVGFPSKVKFSPASLN------I---GG--TKDTQ--EMLEYCAAHKI-Y--PQ 310 (344)
Q Consensus 248 vid~~g~~~~~~~~-~~~l~~~G~iv~~g~~~~~~~~~~~~~------~---~~--~~~~~--~~~~~~~~g~~-~--~~ 310 (344)
+|+++|+...+... ++.++++|+++.+|.. +..++...+. . .. ...++ +.+.++++|.+ . +.
T Consensus 261 VI~atG~~~~i~~~~l~~mk~GgilvnvG~~-~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~ 339 (413)
T cd00401 261 FVTTTGNKDIITGEHFEQMKDGAIVCNIGHF-DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA 339 (413)
T ss_pred EEECCCCHHHHHHHHHhcCCCCcEEEEeCCC-CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence 99999998878776 9999999999999965 2222222111 1 11 11445 79999999998 2 22
Q ss_pred e-EE-----EeCc-cHHHHHHHHHcCCcc-eEEEEEe
Q 019199 311 I-ET-----IPIE-NVNEALERLIKRDVK-YRFVIDI 339 (344)
Q Consensus 311 ~-~~-----~~~~-~~~~a~~~~~~~~~~-gkvvi~~ 339 (344)
+ |. ++|+ |+.++++.+.+++.. -|+++..
T Consensus 340 ~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 340 TGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred CCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 2 55 8899 999999998886543 4665543
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.11 E-value=2.6e-09 Score=101.69 Aligned_cols=130 Identities=20% Similarity=0.193 Sum_probs=95.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCCH-------------HHH---HH-
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDL-------------EQM---KA- 240 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~-------------~~~---~~- 240 (344)
.++++|+|+|+|.+|+.+++.|+.+|++|++++.++++++.+ +++|++.+ ++..+. +.. .+
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a-eslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV-ESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 689999999999999999999999999999999999999998 78999854 544221 111 11
Q ss_pred ---hcCCccEEEECCCCc-----hh-HHHHHHhcccCCEEEEEcCC--Cc--cccCCceee-------ee---ch-HhHH
Q 019199 241 ---LGKSLDFIIDTASGD-----HP-FDAYMSLLKVAGVYVLVGFP--SK--VKFSPASLN-------IG---GT-KDTQ 296 (344)
Q Consensus 241 ---~~~~~dvvid~~g~~-----~~-~~~~~~~l~~~G~iv~~g~~--~~--~~~~~~~~~-------~~---~~-~~~~ 296 (344)
..+++|++|+|++.+ .. .+++++.++++|+++++|.. .+ .+.+...+. .+ .. +...
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~ 321 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT 321 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence 125799999999963 34 49999999999999999974 22 233222221 11 12 3344
Q ss_pred HHHHHHHhCCCcc
Q 019199 297 EMLEYCAAHKIYP 309 (344)
Q Consensus 297 ~~~~~~~~g~~~~ 309 (344)
++.+++.++.+..
T Consensus 322 ~As~lla~~~i~l 334 (509)
T PRK09424 322 QSSQLYGTNLVNL 334 (509)
T ss_pred HHHHHHHhCCccH
Confidence 6899999988754
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.59 E-value=9.4e-07 Score=82.60 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=80.9
Q ss_pred HhHHHHHhccC-CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCc
Q 019199 167 TVYTPMMRHKM-NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245 (344)
Q Consensus 167 ta~~~l~~~~~-~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 245 (344)
.+|+++.+... .-.|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ...|++ +.+ +.+...++
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-~~~G~~-v~~------l~eal~~a 268 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQA-AMDGFR-VMT------MEEAAELG 268 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-HhcCCE-ecC------HHHHHhCC
Confidence 34677766633 2489999999999999999999999999999999988887666 355754 221 12333579
Q ss_pred cEEEECCCCchhHH-HHHHhcccCCEEEEEcCC
Q 019199 246 DFIIDTASGDHPFD-AYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 246 dvvid~~g~~~~~~-~~~~~l~~~G~iv~~g~~ 277 (344)
|++|+++|....+. ..+..+++++.++..|..
T Consensus 269 DVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~ 301 (425)
T PRK05476 269 DIFVTATGNKDVITAEHMEAMKDGAILANIGHF 301 (425)
T ss_pred CEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCC
Confidence 99999999877665 688999999999999865
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.55 E-value=7.2e-07 Score=84.99 Aligned_cols=98 Identities=26% Similarity=0.286 Sum_probs=77.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCC-------------HHH-------
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSD-------------LEQ------- 237 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~-------------~~~------- 237 (344)
.++++|+|+|+|.+|+++++.++.+|++|++++.++++++.+ +++|++.+ ++..+ .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999999999999999888 67998653 22211 111
Q ss_pred HHHhcCCccEEEECC---CCch---hHHHHHHhcccCCEEEEEcCC
Q 019199 238 MKALGKSLDFIIDTA---SGDH---PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 238 ~~~~~~~~dvvid~~---g~~~---~~~~~~~~l~~~G~iv~~g~~ 277 (344)
..+..+++|++|+|+ |.+. ..+..++.+++++.+++++..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 122236899999999 5432 478889999999999999755
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.54 E-value=1.4e-06 Score=77.60 Aligned_cols=159 Identities=18% Similarity=0.250 Sum_probs=98.5
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHh---CCCcEE-EeCCCHHHHHHhcCCccEEEE
Q 019199 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSL---LGADKF-VVSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~dvvid 250 (344)
.+++|++||.+|+|+ |..+.++++..|. +|++++.+++.++.+++. .|.+.+ +...+...+....+.+|+|+.
T Consensus 74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~ 152 (272)
T PRK11873 74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIIS 152 (272)
T ss_pred cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEE
Confidence 348999999999987 8888888888775 699999999988777432 333211 111122111111257999985
Q ss_pred CC------CCchhHHHHHHhcccCCEEEEEcCCCccccCCce-----ee---eechHhHHHHHHHHHhCCCcc---ce-E
Q 019199 251 TA------SGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPAS-----LN---IGGTKDTQEMLEYCAAHKIYP---QI-E 312 (344)
Q Consensus 251 ~~------g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~g~~~~---~~-~ 312 (344)
.. .....++.+.+.|+|+|+++..+......++... +. .......+++.+++.+.-+.. .. .
T Consensus 153 ~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i~~~~ 232 (272)
T PRK11873 153 NCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITIQPKR 232 (272)
T ss_pred cCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEEEecc
Confidence 43 2234589999999999999988755111111000 00 111224556777777644433 22 5
Q ss_pred EEeCccHHHHHHHH--HcCCcceEEE
Q 019199 313 TIPIENVNEALERL--IKRDVKYRFV 336 (344)
Q Consensus 313 ~~~~~~~~~a~~~~--~~~~~~gkvv 336 (344)
.++++++.++++.+ .+++..++.+
T Consensus 233 ~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 233 EYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred ceecccHHHHHHHhccccccccCceE
Confidence 68899999999988 5554444444
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.53 E-value=3.5e-06 Score=75.81 Aligned_cols=102 Identities=19% Similarity=0.233 Sum_probs=79.2
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid 250 (344)
++......-.+.+++|+|.|.+|+.+++.++.+|++|++++++.++.+.+ +.+|+..+ . .+.+.+...++|++|+
T Consensus 142 a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~-~---~~~l~~~l~~aDiVI~ 216 (296)
T PRK08306 142 AIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPF-H---LSELAEEVGKIDIIFN 216 (296)
T ss_pred HHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeee-c---HHHHHHHhCCCCEEEE
Confidence 34333332368999999999999999999999999999999998887777 57886532 2 2233444567999999
Q ss_pred CCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 251 TASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+++........++.+++++.+++++..
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~ 243 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASK 243 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccC
Confidence 998665457778889999999999876
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.47 E-value=3.3e-06 Score=79.25 Aligned_cols=101 Identities=19% Similarity=0.192 Sum_probs=78.8
Q ss_pred HHHHHhcc-CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199 169 YTPMMRHK-MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF 247 (344)
Q Consensus 169 ~~~l~~~~-~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv 247 (344)
+.++.+.. ..-.|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ...|+.. ++ +.+...+.|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~v-v~------leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQV-LT------LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCee-cc------HHHHHhhCCE
Confidence 55555553 33679999999999999999999999999999999888776555 4567653 21 1222346899
Q ss_pred EEECCCCchh-HHHHHHhcccCCEEEEEcCC
Q 019199 248 IIDTASGDHP-FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 248 vid~~g~~~~-~~~~~~~l~~~G~iv~~g~~ 277 (344)
++++.|+... ....++.+++++.++.+|..
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 9999998764 48899999999999999874
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.44 E-value=2.8e-06 Score=78.99 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=79.3
Q ss_pred hHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCcc
Q 019199 168 VYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD 246 (344)
Q Consensus 168 a~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 246 (344)
++.++.+. +....|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ...|+. +.+ . .+...+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~---l---eeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFR-VMT---M---EEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCE-eCC---H---HHHHhcCC
Confidence 35555554 334789999999999999999999999999999999888877666 456763 221 1 12235689
Q ss_pred EEEECCCCchhHHH-HHHhcccCCEEEEEcCC
Q 019199 247 FIIDTASGDHPFDA-YMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 247 vvid~~g~~~~~~~-~~~~l~~~G~iv~~g~~ 277 (344)
++|+++|+...+.. .+..+++++.++.+|..
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 99999998886764 88999999999998864
No 138
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.35 E-value=5.5e-06 Score=76.91 Aligned_cols=98 Identities=19% Similarity=0.248 Sum_probs=75.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC---C--
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS---G-- 254 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g---~-- 254 (344)
++.+|+|+|+|.+|+.+++.++.+|++|++++++.++++.+.+.++........+.+.+.+...++|++|++++ .
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 34568999999999999999999999999999998888777566775433334444555555578999999973 2
Q ss_pred ch-hHHHHHHhcccCCEEEEEcCC
Q 019199 255 DH-PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 255 ~~-~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+. .....++.+++++.+++++..
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecC
Confidence 21 147788889999999998855
No 139
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.29 E-value=2.1e-07 Score=87.79 Aligned_cols=185 Identities=17% Similarity=0.220 Sum_probs=114.2
Q ss_pred CCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc
Q 019199 65 LVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER 144 (344)
Q Consensus 65 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 144 (344)
..-|.|+++.+.+++++.++.-+|+.=+ ||.|.+| ...|...... |...++.|++++.++.
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI-------~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k- 148 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQI-------LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK- 148 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHH-------HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-
Confidence 3579999999999999988866666542 6677666 3333332111 3345678998887765
Q ss_pred eEEE---c-CCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 019199 145 YCYK---I-ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEE 219 (344)
Q Consensus 145 ~~~~---~-P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~ 219 (344)
.+.. + +..++...+| .-.+....+. .++++|+|+|+|.+|..+++.++..|+ +|+++.++.++...
T Consensus 149 ~vr~~t~i~~~~vSv~~~A--------v~la~~~~~~-l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~ 219 (417)
T TIGR01035 149 RVRTETDISAGAVSISSAA--------VELAERIFGS-LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAED 219 (417)
T ss_pred hhhhhcCCCCCCcCHHHHH--------HHHHHHHhCC-ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 2222 3 2223222221 1111222223 678999999999999999999999995 89999999888765
Q ss_pred HHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH--HHHHHh-ccc--C-CEEEEEcCCCccc
Q 019199 220 ALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF--DAYMSL-LKV--A-GVYVLVGFPSKVK 281 (344)
Q Consensus 220 ~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~--~~~~~~-l~~--~-G~iv~~g~~~~~~ 281 (344)
+.+.+|... +.. +...+...++|+||++++.+..+ ...++. ++. . -.+++++.+.+.+
T Consensus 220 la~~~g~~~-i~~---~~l~~~l~~aDvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdid 283 (417)
T TIGR01035 220 LAKELGGEA-VKF---EDLEEYLAEADIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRDVD 283 (417)
T ss_pred HHHHcCCeE-eeH---HHHHHHHhhCCEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCCC
Confidence 656777642 322 22333345799999999865422 122222 221 1 2566777664443
No 140
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.27 E-value=5.1e-05 Score=64.78 Aligned_cols=113 Identities=16% Similarity=0.225 Sum_probs=81.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC----cEEEeCCCHHHHHH----h---cCCccE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA----DKFVVSSDLEQMKA----L---GKSLDF 247 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~~v~~~~~~~~~~----~---~~~~dv 247 (344)
.++.++|.|| +++|.+.++.+...|++|+.+.|+.++++++..+++. -..+|-.+.+.+.. + -+.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4577899998 8999999999999999999999999999999888983 33456666544322 2 267999
Q ss_pred EEECCCCch----------hHHHHHH---------------hc--ccCCEEEEEcCC-CccccCCceeeeech
Q 019199 248 IIDTASGDH----------PFDAYMS---------------LL--KVAGVYVLVGFP-SKVKFSPASLNIGGT 292 (344)
Q Consensus 248 vid~~g~~~----------~~~~~~~---------------~l--~~~G~iv~~g~~-~~~~~~~~~~~~~~~ 292 (344)
.+++.|... -|+.+++ .+ +..|+|+.+|.. +...++....+-.++
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK 157 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATK 157 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhH
Confidence 999998531 1222221 12 446899999887 666677666664433
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.20 E-value=1.7e-05 Score=72.03 Aligned_cols=109 Identities=21% Similarity=0.226 Sum_probs=78.0
Q ss_pred ceEEEcCCCCCcccccccchhhhHhHHHHHhccCC---CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 019199 144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN---QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEE 219 (344)
Q Consensus 144 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~ 219 (344)
...+++|+.+..+.++... +...++.++..+... -++.+|+|+|+|.+|..+++.++..|+ +|++++++.++...
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 3567788888888776433 344445555444431 478999999999999999999998876 88999999888766
Q ss_pred HHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199 220 ALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 220 ~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
+.+++|.. +++. +.+.+....+|+||.+++.+..
T Consensus 218 la~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL---DELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence 66788874 3332 2223333568999999998874
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.15 E-value=2.7e-05 Score=73.35 Aligned_cols=123 Identities=15% Similarity=0.196 Sum_probs=86.1
Q ss_pred EEEcCCCCCccccc-ccchhhhHhHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh
Q 019199 146 CYKIANDYPLALAA-PLLCAGITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL 223 (344)
Q Consensus 146 ~~~~P~~~~~~~aa-~l~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~ 223 (344)
++.+|+...-..+- .+.+...+ +.++.+. +..-.|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ..
T Consensus 218 V~nv~d~~tk~~aD~~~G~~~s~-~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~ 295 (476)
T PTZ00075 218 AINVNDSVTKSKFDNIYGCRHSL-IDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQA-AM 295 (476)
T ss_pred EEEeCCcchHHHHHHHHHHHHHH-HHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-Hh
Confidence 55556654433332 23332222 3444333 344689999999999999999999999999999998877766555 34
Q ss_pred CCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH-HHHHhcccCCEEEEEcCC
Q 019199 224 LGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD-AYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 224 ~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~-~~~~~l~~~G~iv~~g~~ 277 (344)
.|+..+ . +.+....+|+++.+.|+...+. ..++.+++++.++.+|..
T Consensus 296 ~G~~~~----~---leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 296 EGYQVV----T---LEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cCceec----c---HHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 565422 1 2233467999999999877564 899999999999999865
No 143
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.12 E-value=8.5e-05 Score=66.52 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=72.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~ 258 (344)
-.|++++|+|.|.+|.+++..++.+|++|++..++.++.+.+ .++|... +. .+.+.+...++|+++++++....-
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~-~~---~~~l~~~l~~aDiVint~P~~ii~ 223 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIP-FP---LNKLEEKVAEIDIVINTIPALVLT 223 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCee-ec---HHHHHHHhccCCEEEECCChHHhC
Confidence 358899999999999999999999999999999998877666 4666542 22 223344446799999998755323
Q ss_pred HHHHHhcccCCEEEEEcCC
Q 019199 259 DAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 259 ~~~~~~l~~~G~iv~~g~~ 277 (344)
...++.++++..+++++..
T Consensus 224 ~~~l~~~k~~aliIDlas~ 242 (287)
T TIGR02853 224 ADVLSKLPKHAVIIDLASK 242 (287)
T ss_pred HHHHhcCCCCeEEEEeCcC
Confidence 5677888999889988765
No 144
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.06 E-value=4.7e-05 Score=66.93 Aligned_cols=130 Identities=17% Similarity=0.204 Sum_probs=81.8
Q ss_pred ceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199 135 YSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (344)
Q Consensus 135 ~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~ 213 (344)
|.++.. +...++++++++++..+. .+.+.. ....+... ..++++||.+|+|. |..++.+++ .|+ +|++++.+
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis 151 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID 151 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence 444433 667789999998887765 221111 22233322 36889999999986 877776555 576 69999999
Q ss_pred chhHHHHHHhC---CCcEEEeCCCHHHHHHhcCCccEEEECCCCc---hhHHHHHHhcccCCEEEEEcCC
Q 019199 214 TSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFIIDTASGD---HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 214 ~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~---~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+...+.+++.. +....+..... ...+|+|+.+.... ..++.+.+.|+++|+++..|..
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~~~------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLPQG------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEccC------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 88777664332 22111111000 01599998765433 2356788889999999988754
No 145
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.96 E-value=2.1e-05 Score=62.22 Aligned_cols=100 Identities=19% Similarity=0.309 Sum_probs=67.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTASGD 255 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~~g~~ 255 (344)
-.+.+++|+|+|+.|.+++..+...|+ +|+++.|+.++.+.+.+.++.. ..+...+.. +...++|++|++++.+
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~---~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE---EALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC---HHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH---HHHhhCCeEEEecCCC
Confidence 468999999999999999999999999 5999999999988887777532 344444332 2235699999998865
Q ss_pred hh--HHHHHHhccc-CCEEEEEcCCCccc
Q 019199 256 HP--FDAYMSLLKV-AGVYVLVGFPSKVK 281 (344)
Q Consensus 256 ~~--~~~~~~~l~~-~G~iv~~g~~~~~~ 281 (344)
.. ....+....+ -+.+++++.+.+..
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla~Pr~i~ 115 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLAVPRDID 115 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES-SS-SB-
T ss_pred CcccCHHHHHHHHhhhhceeccccCCCCC
Confidence 31 2233333322 25777887664433
No 146
>PRK08324 short chain dehydrogenase; Validated
Probab=97.91 E-value=0.00012 Score=73.76 Aligned_cols=132 Identities=21% Similarity=0.236 Sum_probs=87.7
Q ss_pred CcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc--cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEE
Q 019199 133 GGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH--KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTV 209 (344)
Q Consensus 133 g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~ 209 (344)
.++++|..+++..++.+ +..+.+++. +.+. .....|+++||+|+ |++|.++++.+...|++|++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~------------l~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl 451 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAK------------LQRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL 451 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhh------------hhcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence 34567777777666666 555555553 1111 11146789999997 99999999999999999999
Q ss_pred EeCCchhHHHHHHhCCC-----cEEEeCCCHHHHHHh-------cCCccEEEECCCCc----------------------
Q 019199 210 LSTSTSKKEEALSLLGA-----DKFVVSSDLEQMKAL-------GKSLDFIIDTASGD---------------------- 255 (344)
Q Consensus 210 ~~~~~~~~~~~~~~~g~-----~~~v~~~~~~~~~~~-------~~~~dvvid~~g~~---------------------- 255 (344)
++++.++.+.+.+.++. ....|..+.+.+.+. .+++|++|++.|..
T Consensus 452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99998887666555543 122355555443322 25799999999821
Q ss_pred ---hhHHHHHHhccc---CCEEEEEcCC
Q 019199 256 ---HPFDAYMSLLKV---AGVYVLVGFP 277 (344)
Q Consensus 256 ---~~~~~~~~~l~~---~G~iv~~g~~ 277 (344)
..++.+++.+++ +|+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLGGSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence 123344555555 6899998765
No 147
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.73 E-value=3.8e-05 Score=75.72 Aligned_cols=96 Identities=20% Similarity=0.186 Sum_probs=65.8
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC---------------------chhHHHHHHhCCCcEEEeCCC-H
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS---------------------TSKKEEALSLLGADKFVVSSD-L 235 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~---------------------~~~~~~~~~~~g~~~~v~~~~-~ 235 (344)
.+.|++|+|+|+|+.|+++++.++..|++|++++.. +.+++.+ +++|++..++... .
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~-~~~Gv~~~~~~~~~~ 212 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRI-LDLGVEVRLGVRVGE 212 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHH-HHCCCEEEeCCEECC
Confidence 478999999999999999999999999999998853 2345566 5789876665432 1
Q ss_pred H-HHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199 236 E-QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 236 ~-~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 274 (344)
+ .......++|+||+++|........+......|.+..+
T Consensus 213 ~~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~ 252 (564)
T PRK12771 213 DITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV 252 (564)
T ss_pred cCCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence 1 11223356999999999765333333344444544433
No 148
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.64 E-value=0.00048 Score=57.77 Aligned_cols=100 Identities=27% Similarity=0.285 Sum_probs=70.2
Q ss_pred HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCcEE-EeCCCHHHHHH-hcCCcc
Q 019199 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKF-VVSSDLEQMKA-LGKSLD 246 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~~~-v~~~~~~~~~~-~~~~~d 246 (344)
|.+...+++|++||=+|+| .|+.++-+++..+ +|+.+.+.++=.+.+ .+.+|-..+ +...|- .... ....||
T Consensus 64 m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG-~~G~~~~aPyD 140 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG-SKGWPEEAPYD 140 (209)
T ss_pred HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc-ccCCCCCCCcC
Confidence 3345556999999999987 4999999999888 899999887733333 356775322 222221 1000 115699
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~ 274 (344)
.++-+.+.+..-+.+++.|+++|+++.-
T Consensus 141 ~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 141 RIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred EEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence 9998888777578999999999999754
No 149
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.60 E-value=0.00035 Score=58.07 Aligned_cols=121 Identities=24% Similarity=0.291 Sum_probs=82.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-c--
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-D-- 255 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~-- 255 (344)
-.|.+|.|+|.|.+|+..+++++.+|++|++.++........ ...+. ...+.+ ++-...|+++.+... +
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~----~~~~l~---ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGV----EYVSLD---ELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTE----EESSHH---HHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-ccccc----eeeehh---hhcchhhhhhhhhcccccc
Confidence 568999999999999999999999999999999998866534 35553 222322 222348999887762 2
Q ss_pred --hhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEeCccHH
Q 019199 256 --HPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPIENVN 320 (344)
Q Consensus 256 --~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~ 320 (344)
..-...++.++++..+|.++-..-+ +-+.+++.+++|++.-. .++|.-|..+
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG~~v-------------de~aL~~aL~~g~i~ga~lDV~~~EP~~ 160 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARGELV-------------DEDALLDALESGKIAGAALDVFEPEPLP 160 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSGGGB--------------HHHHHHHHHTTSEEEEEESS-SSSSSS
T ss_pred ceeeeeeeeeccccceEEEeccchhhh-------------hhhHHHHHHhhccCceEEEECCCCCCCC
Confidence 1245778899999999888633221 35688999999999753 3666555443
No 150
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.59 E-value=0.001 Score=64.51 Aligned_cols=103 Identities=15% Similarity=0.113 Sum_probs=70.8
Q ss_pred ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--------CC------c-EEEeCCCHHHH
Q 019199 175 HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--------GA------D-KFVVSSDLEQM 238 (344)
Q Consensus 175 ~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--------g~------~-~~v~~~~~~~~ 238 (344)
....+.|.++||+|+ |.+|..+++.+...|++|++++++.++...+.+.+ |. . ...|..+.+.+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 333478899999998 99999999999889999999999988765543221 21 1 12355566666
Q ss_pred HHhcCCccEEEECCCCch---------------hHHHHHHhccc--CCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDH---------------PFDAYMSLLKV--AGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~---------------~~~~~~~~l~~--~G~iv~~g~~ 277 (344)
.+..+++|++|.+.|... ....+++.+.. .++||.++..
T Consensus 154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi 209 (576)
T PLN03209 154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL 209 (576)
T ss_pred HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence 655578999999987531 12334444433 3689988765
No 151
>PRK12742 oxidoreductase; Provisional
Probab=97.58 E-value=0.0024 Score=55.30 Aligned_cols=98 Identities=21% Similarity=0.208 Sum_probs=65.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhCCCcEE-EeCCCHHHHHHh---cCCccEEEECCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKF-VVSSDLEQMKAL---GKSLDFIIDTAS 253 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~---~~~~dvvid~~g 253 (344)
.+.++||+|+ |++|.++++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+.+.+.+. .+++|+++++.|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4678999998 99999999999999999887765 44555555455565432 344454433332 256999999887
Q ss_pred Cch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199 254 GDH-------------------------PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 254 ~~~-------------------------~~~~~~~~l~~~G~iv~~g~~ 277 (344)
... ....++..++..|+++.++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 133 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV 133 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 421 012334445667899988765
No 152
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.56 E-value=0.00048 Score=65.38 Aligned_cols=161 Identities=18% Similarity=0.200 Sum_probs=98.8
Q ss_pred CCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc
Q 019199 65 LVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER 144 (344)
Q Consensus 65 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 144 (344)
..-|||+++.+.+++++.++.-+|+.=+ |++|.+.+ ..|..... -|...++.|++.+.++
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qI----------lgQvk~a~-~~a~~~g~-------~g~~l~~lf~~a~~~~-- 149 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQI----------LGQVKDAY-ALAQEAGT-------VGTILNRLFQKAFSVA-- 149 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHH----------HHHHHHHH-HHHHHcCC-------chHHHHHHHHHHHHHH--
Confidence 3469999999999999988876776542 33333221 11211100 0223345565554333
Q ss_pred eEEEcCCCCCcccccccchhhhHhHHHHHhccC---CCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH
Q 019199 145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKM---NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA 220 (344)
Q Consensus 145 ~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~ 220 (344)
+.+....+. ...+...++.++..+.. -.++.+|+|+|+|.+|.++++.++..|+ +|+++.++.++...+
T Consensus 150 ------k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~l 222 (423)
T PRK00045 150 ------KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEEL 222 (423)
T ss_pred ------hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH
Confidence 333222221 11122333444443332 1578999999999999999999999998 899999998887766
Q ss_pred HHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199 221 LSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 221 ~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~ 256 (344)
.+++|.+ +++. +...+...++|+||++++.+.
T Consensus 223 a~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 223 AEEFGGE-AIPL---DELPEALAEADIVISSTGAPH 254 (423)
T ss_pred HHHcCCc-EeeH---HHHHHHhccCCEEEECCCCCC
Confidence 5778864 3332 222333367999999998754
No 153
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.54 E-value=0.0008 Score=62.15 Aligned_cols=96 Identities=25% Similarity=0.292 Sum_probs=74.8
Q ss_pred CEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCC---CcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199 182 KSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG---ADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 182 ~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
.++||+|+|.+|+.+++.+...+ .+|++.+++.++++.+....+ -...+|-.+.+.+.++..++|+||++.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 46899999999999999988888 599999999999888844432 24567777777777777778999999998875
Q ss_pred HHHHHHhcccCCEEEEEcCC
Q 019199 258 FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 258 ~~~~~~~l~~~G~iv~~g~~ 277 (344)
+.-+-.|++.+=.++++...
T Consensus 82 ~~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYY 101 (389)
T ss_pred HHHHHHHHHhCCCEEEcccC
Confidence 65555666777667666544
No 154
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.54 E-value=0.0019 Score=54.58 Aligned_cols=117 Identities=15% Similarity=0.141 Sum_probs=77.9
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHH---HhCC-Cc--EEEeCCCHHHHHHhcCCccEE
Q 019199 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEAL---SLLG-AD--KFVVSSDLEQMKALGKSLDFI 248 (344)
Q Consensus 177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~---~~~g-~~--~~v~~~~~~~~~~~~~~~dvv 248 (344)
.+.++++|+.+|+|+ |..++.+++..+ .+|+.++.+++..+.++ +.+| .+ .++..+..+.+......+|.|
T Consensus 37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V 115 (198)
T PRK00377 37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI 115 (198)
T ss_pred CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence 348999999999987 888888888764 48999999988776553 2355 22 222222233344444679999
Q ss_pred EECCCC---chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199 249 IDTASG---DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 249 id~~g~---~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (344)
|...+. ...+..+.+.|+|+|+++..-. ..+.+.++.+.+.+..+.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~--------------~~~~~~~~~~~l~~~g~~ 164 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVIDAI--------------LLETVNNALSALENIGFN 164 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEEEee--------------cHHHHHHHHHHHHHcCCC
Confidence 985543 2347778889999999985421 112356777777655553
No 155
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.54 E-value=0.00061 Score=51.65 Aligned_cols=94 Identities=22% Similarity=0.245 Sum_probs=65.1
Q ss_pred CCCEEEEECCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHhC---C--CcEEEeCCCHHHHHHhcCCccEEEECC-
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVLSTSTSKKEEALSLL---G--ADKFVVSSDLEQMKALGKSLDFIIDTA- 252 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~-~~g~~V~~~~~~~~~~~~~~~~~---g--~~~~v~~~~~~~~~~~~~~~dvvid~~- 252 (344)
||.+||-+|+|. |..++.+++ ..+++|++++.+++..+.+++.. + ....+...+.........+||+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 79 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF 79 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence 688999999874 778888888 47889999999999887776655 2 222222222211222346799999866
Q ss_pred CC---ch------hHHHHHHhcccCCEEEEE
Q 019199 253 SG---DH------PFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 253 g~---~~------~~~~~~~~l~~~G~iv~~ 274 (344)
.. .. .++.+.+.|+|+|+++..
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 21 11 267888999999999864
No 156
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.50 E-value=0.00071 Score=59.62 Aligned_cols=96 Identities=21% Similarity=0.233 Sum_probs=78.2
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-----c
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-----D 255 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-----~ 255 (344)
..+|.|+|.|.+|.-++.+|..+|++|++.+.+.+|++.+...|+.....-++.+..+++.-.++|++|.++=- |
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP 247 (371)
T ss_pred CccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence 34577789999999999999999999999999999999997777766555567777777777789999886521 1
Q ss_pred -hhHHHHHHhcccCCEEEEEcC
Q 019199 256 -HPFDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 256 -~~~~~~~~~l~~~G~iv~~g~ 276 (344)
...++.++.|+|++.++++..
T Consensus 248 kLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred eehhHHHHHhcCCCcEEEEEEE
Confidence 237788999999999998863
No 157
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.48 E-value=0.0027 Score=52.24 Aligned_cols=114 Identities=23% Similarity=0.235 Sum_probs=78.4
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHH---HHhCCCc--EEEeCCCHHHHHHhcCCccEEEEC
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEA---LSLLGAD--KFVVSSDLEQMKALGKSLDFIIDT 251 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~---~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~ 251 (344)
+++|+.++-+|+|+ |...++++... ..+|+++++++++.+.. .++||.+ .++..+.++.+.... .+|.+|--
T Consensus 32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG 109 (187)
T COG2242 32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG 109 (187)
T ss_pred CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence 48999888889863 66777888443 34999999998865443 3567865 555666676666544 69999865
Q ss_pred CCC--chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199 252 ASG--DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI 307 (344)
Q Consensus 252 ~g~--~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 307 (344)
-|. +..++.+|..|+++|++|.-..+ .+....+++++++--+
T Consensus 110 Gg~~i~~ile~~~~~l~~ggrlV~nait--------------lE~~~~a~~~~~~~g~ 153 (187)
T COG2242 110 GGGNIEEILEAAWERLKPGGRLVANAIT--------------LETLAKALEALEQLGG 153 (187)
T ss_pred CCCCHHHHHHHHHHHcCcCCeEEEEeec--------------HHHHHHHHHHHHHcCC
Confidence 543 23478889999999999876322 2334566666665544
No 158
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.41 E-value=0.0051 Score=49.64 Aligned_cols=101 Identities=18% Similarity=0.259 Sum_probs=68.4
Q ss_pred HHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199 169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF 247 (344)
Q Consensus 169 ~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv 247 (344)
+.++.+. ...-.|.+++|.|-|-+|...++.++.+|++|++++.++-+.-++ ..-|.+.. .+.+.....|+
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA-~~dGf~v~-------~~~~a~~~adi 81 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQA-AMDGFEVM-------TLEEALRDADI 81 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH-HHTT-EEE--------HHHHTTT-SE
T ss_pred HHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHh-hhcCcEec-------CHHHHHhhCCE
Confidence 4444433 445689999999999999999999999999999999999877666 35565432 23444567999
Q ss_pred EEECCCCchh-HHHHHHhcccCCEEEEEcCC
Q 019199 248 IIDTASGDHP-FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 248 vid~~g~~~~-~~~~~~~l~~~G~iv~~g~~ 277 (344)
++.++|.... -.+-++.|+++..+..+|..
T Consensus 82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 82 FVTATGNKDVITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp EEE-SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred EEECCCCccccCHHHHHHhcCCeEEeccCcC
Confidence 9999998653 45778899999888888755
No 159
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.40 E-value=0.01 Score=53.18 Aligned_cols=147 Identities=19% Similarity=0.107 Sum_probs=89.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHH-HCC-CeEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGK-AFG-LNVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~-~~g-~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g~~~ 256 (344)
.+.|+|.+| +-.++.++..++ ..+ .+++.+++..++. ..+.+|+ +.++.+++.+.+.. ..--+++|..|+..
T Consensus 136 a~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~--Fve~lg~Yd~V~~Yd~i~~l~~--~~~~v~VDfaG~~~ 211 (314)
T PF11017_consen 136 AAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVA--FVESLGCYDEVLTYDDIDSLDA--PQPVVIVDFAGNGE 211 (314)
T ss_pred ccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchh--hhhccCCceEEeehhhhhhccC--CCCEEEEECCCCHH
Confidence 355666777 777777777777 344 4888888766644 4578895 88888876554322 44567889999988
Q ss_pred hHHHHHHhcccCC-EEEEEcCC--Cc----cccCCce-e--e-----------eechHhHHH---HHHHHHhCCCcc--c
Q 019199 257 PFDAYMSLLKVAG-VYVLVGFP--SK----VKFSPAS-L--N-----------IGGTKDTQE---MLEYCAAHKIYP--Q 310 (344)
Q Consensus 257 ~~~~~~~~l~~~G-~iv~~g~~--~~----~~~~~~~-~--~-----------~~~~~~~~~---~~~~~~~g~~~~--~ 310 (344)
....+...+...- ..+.+|.+ .. ..++... . + ++..+..++ ...-+.+..... .
T Consensus 212 ~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~ 291 (314)
T PF11017_consen 212 VLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKV 291 (314)
T ss_pred HHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 7888888887753 45677765 11 1121111 1 1 111111121 222222222222 2
Q ss_pred eEEEeCccHHHHHHHHHcCCc
Q 019199 311 IETIPIENVNEALERLIKRDV 331 (344)
Q Consensus 311 ~~~~~~~~~~~a~~~~~~~~~ 331 (344)
.++.+.+.+.++++++++++.
T Consensus 292 ~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 292 EEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred EEecCHHHHHHHHHHHhcCCC
Confidence 367799999999999998763
No 160
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.40 E-value=0.00092 Score=55.47 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=56.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--CcEEEeCCCHHHHHHh-------cCCccEEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--ADKFVVSSDLEQMKAL-------GKSLDFII 249 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~~-------~~~~dvvi 249 (344)
-|.++||.|+ +++|++.++....+|=+||+..|++++++++..... ...+.|..+.+..+++ -...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4789999975 899999999999999999999999999999855554 3556666665433332 24678888
Q ss_pred ECCC
Q 019199 250 DTAS 253 (344)
Q Consensus 250 d~~g 253 (344)
++.|
T Consensus 84 NNAG 87 (245)
T COG3967 84 NNAG 87 (245)
T ss_pred eccc
Confidence 8776
No 161
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.40 E-value=0.0021 Score=57.74 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=62.3
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhC---CCc-EEEeCCCHHHHHHhcCCccEEEECCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL---GAD-KFVVSSDLEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~dvvid~~g 253 (344)
.++++||-+|+|+ |..++.+++ .|+ +|++++.++...+.+++.. +.. .+..... +......++||+|+....
T Consensus 158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLEQPIEGKADVIVANIL 234 (288)
T ss_pred CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-ccccccCCCceEEEEecC
Confidence 6789999999986 777777666 466 8999999988766663322 211 1111110 011112357999987554
Q ss_pred Cc---hhHHHHHHhcccCCEEEEEcCC
Q 019199 254 GD---HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 254 ~~---~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.. ..+..+.+.|+|+|+++..|..
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 32 2356778899999999988754
No 162
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0054 Score=54.68 Aligned_cols=73 Identities=18% Similarity=0.245 Sum_probs=54.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh--------cCCccEEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL--------GKSLDFII 249 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~--------~~~~dvvi 249 (344)
.+.++||+|+ |++|.+.++.+...|++|+++++++++++.+ ...+.+. ..|..+.+.+.+. .+.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL-EAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4578999998 9999999999888999999999998887766 3445432 2355555433221 25789999
Q ss_pred ECCC
Q 019199 250 DTAS 253 (344)
Q Consensus 250 d~~g 253 (344)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 163
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.36 E-value=0.0027 Score=54.99 Aligned_cols=98 Identities=27% Similarity=0.332 Sum_probs=66.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEEE--eCCCHHHHHHh-------cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFV--VSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~v--~~~~~~~~~~~-------~~~~d 246 (344)
++++++|+|+ |++|..+++.+...|++|+.+++++++.+.+.+.. +..+.+ |..+.+.+.+. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999998 99999999999999999999999988765552332 221222 33444333221 25689
Q ss_pred EEEECCCCc-----------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199 247 FIIDTASGD-----------------------HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 247 vvid~~g~~-----------------------~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.++.+.+.. ..++.++..++++|+++.++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 999888742 1134455566778999988765
No 164
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.35 E-value=0.0023 Score=53.11 Aligned_cols=91 Identities=27% Similarity=0.197 Sum_probs=67.1
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc----hh
Q 019199 184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD----HP 257 (344)
Q Consensus 184 vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~----~~ 257 (344)
|+|+|+ |.+|..+++.+...|.+|+++.+++++.+. ..+.+. ..|..+.+.+.+...++|+||.+++.. ..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 688998 999999999999999999999999997764 334332 234566666776667899999999842 22
Q ss_pred HHHHHHhcccCC--EEEEEcCC
Q 019199 258 FDAYMSLLKVAG--VYVLVGFP 277 (344)
Q Consensus 258 ~~~~~~~l~~~G--~iv~~g~~ 277 (344)
...+++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 556666664443 77777644
No 165
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.34 E-value=0.0011 Score=58.08 Aligned_cols=77 Identities=23% Similarity=0.272 Sum_probs=58.5
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC----c---EEEeCCCHHHHHHh-------cC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA----D---KFVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~---~~v~~~~~~~~~~~-------~~ 243 (344)
..+.++||+|| +++|...+..+...|.+++.+.|+.++++.+.+++.- . ..+|..+++.+.++ ..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46789999998 9999999999999999999999999999887666542 1 12344454443332 24
Q ss_pred CccEEEECCCCc
Q 019199 244 SLDFIIDTASGD 255 (344)
Q Consensus 244 ~~dvvid~~g~~ 255 (344)
.+|+.+|++|..
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 799999999853
No 166
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.34 E-value=0.0045 Score=54.76 Aligned_cols=110 Identities=19% Similarity=0.193 Sum_probs=72.3
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCC-Cc-E---EEeCCCHHHHHH-------hc
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLG-AD-K---FVVSSDLEQMKA-------LG 242 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g-~~-~---~v~~~~~~~~~~-------~~ 242 (344)
-.|..|+|.|| +++|.+.+.-.-..|++++.+.+..++++... ++.+ .+ . ..|-.+.+..++ .-
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 35788999998 89999988888889999888888877664441 2334 33 1 123444444332 23
Q ss_pred CCccEEEECCCCc-------------------------hhHHHHHHhcccC--CEEEEEcCC-CccccCCceee
Q 019199 243 KSLDFIIDTASGD-------------------------HPFDAYMSLLKVA--GVYVLVGFP-SKVKFSPASLN 288 (344)
Q Consensus 243 ~~~dvvid~~g~~-------------------------~~~~~~~~~l~~~--G~iv~~g~~-~~~~~~~~~~~ 288 (344)
+++|+.+++.|-. ...+.++..|++. |+|+.++.. +...++..+++
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y 163 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY 163 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence 7899999988743 1233555556443 999999877 55555555444
No 167
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0074 Score=53.27 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=55.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv 248 (344)
.+.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.++++... ..|..+.+.+.+. .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999998 999999999998899999999999887766656665321 2344555443322 2578999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
+++.|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 998874
No 168
>PRK06182 short chain dehydrogenase; Validated
Probab=97.32 E-value=0.0054 Score=54.49 Aligned_cols=74 Identities=23% Similarity=0.244 Sum_probs=54.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFIID 250 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvid 250 (344)
.+.+++|+|+ |++|...++.+...|++|++++++.++++.+ ...+.. ...|..+.+.+.+. .+++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-ASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578999998 9999999999988999999999998877665 334433 23455665544332 257999999
Q ss_pred CCCC
Q 019199 251 TASG 254 (344)
Q Consensus 251 ~~g~ 254 (344)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9874
No 169
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.30 E-value=0.0032 Score=55.89 Aligned_cols=95 Identities=19% Similarity=0.228 Sum_probs=73.1
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......+.....--.|.+++|+|.| .+|.-+++++...|++|+++.+....+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l--------------------- 195 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM--------------------- 195 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH---------------------
Confidence 4677766667777766544689999999995 599999999999999999988653222
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+..+.+|++|.++|.+..+.. +.++++..++++|..
T Consensus 196 ~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~ 232 (286)
T PRK14175 196 ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT 232 (286)
T ss_pred HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence 2233569999999998864444 568999999999875
No 170
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0086 Score=53.20 Aligned_cols=72 Identities=21% Similarity=0.205 Sum_probs=53.5
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh-------cCCccEEEECC
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFIIDTA 252 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~dvvid~~ 252 (344)
.++||+|+ |++|...++.+...|++|++++++.++.+.+ ...+... ..|..+.+.+.+. .+++|+++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 46899998 9999999999988999999999988877665 3445433 2466665444332 25799999998
Q ss_pred CC
Q 019199 253 SG 254 (344)
Q Consensus 253 g~ 254 (344)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
No 171
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.28 E-value=0.0043 Score=50.84 Aligned_cols=99 Identities=19% Similarity=0.224 Sum_probs=70.3
Q ss_pred cccchhhhHhHHHHHhccCCCCCCEEEEECCCh-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (344)
Q Consensus 159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 237 (344)
...||...++...+.....--.|.+++|+|+|. +|..++..++..|++|+++.+..+++..
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~------------------ 83 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE------------------ 83 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH------------------
Confidence 456666666666666665446899999999986 5998999999999999888876432221
Q ss_pred HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCcc
Q 019199 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKV 280 (344)
Q Consensus 238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~ 280 (344)
....+|+||.+++.+..+.. +.++++-.+++++.+.+.
T Consensus 84 ---~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~prdv 121 (168)
T cd01080 84 ---HTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINRVP 121 (168)
T ss_pred ---HHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCCcc
Confidence 22458999999988763333 356777777888776443
No 172
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.21 E-value=0.0066 Score=51.13 Aligned_cols=78 Identities=23% Similarity=0.238 Sum_probs=56.2
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCcE-EEeCCCHHHHHHhcCCccEEEECC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADK-FVVSSDLEQMKALGKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~-~v~~~~~~~~~~~~~~~dvvid~~ 252 (344)
-.+.+++|+|+ |.+|..++..+...|++|+++.++.++.+.+.+.+ +... ..+..+.+.+.+...++|++|.++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 46788999997 99999988888888999999999988776654443 3221 223445444444456799999988
Q ss_pred CCch
Q 019199 253 SGDH 256 (344)
Q Consensus 253 g~~~ 256 (344)
+...
T Consensus 106 ~~g~ 109 (194)
T cd01078 106 AAGV 109 (194)
T ss_pred CCCc
Confidence 7654
No 173
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.20 E-value=0.0068 Score=50.70 Aligned_cols=99 Identities=20% Similarity=0.177 Sum_probs=70.3
Q ss_pred CCCCEEEEECC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHHh--------cCCccE
Q 019199 179 QPGKSLGVIGL--GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKAL--------GKSLDF 247 (344)
Q Consensus 179 ~~g~~vlI~Ga--g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~--------~~~~dv 247 (344)
.....|||+|+ |++|+++..-....|+.|+++.+.-++-..+..++|. ..-+|..+++.+.+. .++.|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 34567899874 9999999888888999999999999987777567883 344566666544332 367899
Q ss_pred EEECCCCchh------------------------HHHHH--HhcccCCEEEEEcCC
Q 019199 248 IIDTASGDHP------------------------FDAYM--SLLKVAGVYVLVGFP 277 (344)
Q Consensus 248 vid~~g~~~~------------------------~~~~~--~~l~~~G~iv~~g~~ 277 (344)
.++..|.+-+ +.+++ ..++..|+||.+|..
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl 140 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSL 140 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecce
Confidence 9998875410 11222 235778999999865
No 174
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.18 E-value=0.0058 Score=57.12 Aligned_cols=113 Identities=20% Similarity=0.233 Sum_probs=75.9
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-CcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-ADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~ 238 (344)
++..+..+.+..+.+...+++|++||.+|+| .|..+..+++..|++|++++.+++..+.+.+... ...-+...+.
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~--- 222 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY--- 222 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch---
Confidence 4444555556656555556899999999986 4777888888889999999999998888854432 1111111221
Q ss_pred HHhcCCccEEEEC-----CCC---chhHHHHHHhcccCCEEEEEcC
Q 019199 239 KALGKSLDFIIDT-----ASG---DHPFDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 239 ~~~~~~~dvvid~-----~g~---~~~~~~~~~~l~~~G~iv~~g~ 276 (344)
....+.+|.|+.. ++. ...++.+.+.|+|+|+++....
T Consensus 223 ~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i 268 (383)
T PRK11705 223 RDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI 268 (383)
T ss_pred hhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 1223569988643 332 2347788889999999987643
No 175
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.013 Score=51.90 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=53.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCc---EEEeCCCHHHHHHh------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD---KFVVSSDLEQMKAL------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~~v~~~~~~~~~~~------~~~~ 245 (344)
.|.++||+|+ +++|.+.++.+...|++|++++++.++++.+.+++ +.+ ...|-.+++.+.+. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4678999998 89999999999999999999999887766553332 322 22344554433322 1568
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++++.|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999998874
No 176
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.017 Score=51.30 Aligned_cols=74 Identities=20% Similarity=0.241 Sum_probs=54.3
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-Cc-EEEeCCCHHHHHH-------hcCCccEEEE
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-AD-KFVVSSDLEQMKA-------LGKSLDFIID 250 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~~v~~~~~~~~~~-------~~~~~dvvid 250 (344)
+.++||+|+ |++|...++.+...|++|+++++++++.+.+.+.++ .. ...|..+++.+.+ ..+++|++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999998 999999999888889999999999888766645555 22 2235555544322 1267999999
Q ss_pred CCCC
Q 019199 251 TASG 254 (344)
Q Consensus 251 ~~g~ 254 (344)
+.|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 8874
No 177
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.14 E-value=0.0015 Score=55.65 Aligned_cols=101 Identities=28% Similarity=0.280 Sum_probs=64.1
Q ss_pred HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHH---HhCCCc--EEEeCCCHHHHHHhcCC
Q 019199 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEAL---SLLGAD--KFVVSSDLEQMKALGKS 244 (344)
Q Consensus 172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~---~~~g~~--~~v~~~~~~~~~~~~~~ 244 (344)
+.+...+++|++||-+|+|+ |+.++-+++..|. +|+.++..++-.+.++ +..|.+ .++..+...-+ .....
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~-~~~ap 141 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW-PEEAP 141 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT-GGG-S
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc-ccCCC
Confidence 33444479999999999863 8889999988875 6888888877444443 334432 22222211111 11256
Q ss_pred ccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 274 (344)
||.++-+.+.+..-...++.|+++|++|.-
T Consensus 142 fD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 142 FDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp EEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred cCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 999998888776567899999999999863
No 178
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.012 Score=53.98 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=54.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.+++|+|+ |++|.++++.+...|++|+++++++++++.+.+ ..|... ..|..+.+.+.+. -+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999998 999999999998899999999998877655433 335432 2355555444332 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|++.|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999998874
No 179
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.10 E-value=0.013 Score=55.16 Aligned_cols=99 Identities=15% Similarity=0.194 Sum_probs=67.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
-.+.+++|+|+|.+|.+++..+...|+ +++++.++.++.+.+.++++....+.. +.+.+.-..+|+||+|++.++.
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCCe
Confidence 467889999999999999999999997 899999998888777677762223322 2333334669999999998752
Q ss_pred HHHHHHhcccCC-EEEEEcCCCccc
Q 019199 258 FDAYMSLLKVAG-VYVLVGFPSKVK 281 (344)
Q Consensus 258 ~~~~~~~l~~~G-~iv~~g~~~~~~ 281 (344)
+-. .+.++... .+++++.+.+..
T Consensus 256 vi~-~~~~~~~~~~~iDLavPRdid 279 (414)
T PRK13940 256 IVT-CKYVGDKPRVFIDISIPQALD 279 (414)
T ss_pred eEC-HHHhCCCCeEEEEeCCCCCCC
Confidence 211 12222222 357777774443
No 180
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.011 Score=52.32 Aligned_cols=75 Identities=24% Similarity=0.258 Sum_probs=52.2
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~ 244 (344)
-++.++||+|+ |++|...++.+...|++|+++++++++.+...++ .+... .+|..+.+.+.+. .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 9999999999989999999999887765443222 23221 2355555443332 256
Q ss_pred ccEEEECCC
Q 019199 245 LDFIIDTAS 253 (344)
Q Consensus 245 ~dvvid~~g 253 (344)
+|++|.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 899998875
No 181
>PRK06484 short chain dehydrogenase; Validated
Probab=97.06 E-value=0.016 Score=56.66 Aligned_cols=99 Identities=17% Similarity=0.195 Sum_probs=70.0
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccE
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDF 247 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dv 247 (344)
..|.++||+|+ +++|.+.++.+...|++|+++++++++++.+.++.+.. ...|..+++.+.+. .+.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45788999997 99999999999889999999999988887775566543 23355555443332 257999
Q ss_pred EEECCCCch--------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199 248 IIDTASGDH--------------------------PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 248 vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+|++.|... ..+.++..++.+|+++.++..
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 999887420 122334445667999988765
No 182
>PRK06484 short chain dehydrogenase; Validated
Probab=97.05 E-value=0.017 Score=56.42 Aligned_cols=76 Identities=24% Similarity=0.269 Sum_probs=57.6
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccE
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDF 247 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dv 247 (344)
.++.++||+|+ +++|.+.++.+...|++|++++++.++++.+.++++.. ..+|..+++.+.++ .+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 46788999998 89999999999999999999999988887776666643 23455555443332 267999
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9998874
No 183
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.04 E-value=0.011 Score=53.84 Aligned_cols=96 Identities=22% Similarity=0.149 Sum_probs=66.5
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHH---hCCCcEEEe-CCCHHHHHHhcCCccEEEE
Q 019199 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALS---LLGADKFVV-SSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~~v~-~~~~~~~~~~~~~~dvvid 250 (344)
.++++++||.+|+| .|..++.+++..+. +|+.++.+++..+.+++ ..|.+.+.. ..+..........+|+|+.
T Consensus 77 ~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii~ 155 (322)
T PRK13943 77 GLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFV 155 (322)
T ss_pred CCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEEE
Confidence 34889999999997 49999999998764 69999999886655533 355443221 1221111011146999999
Q ss_pred CCCCchhHHHHHHhcccCCEEEE
Q 019199 251 TASGDHPFDAYMSLLKVAGVYVL 273 (344)
Q Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~ 273 (344)
+.+........++.|+++|+++.
T Consensus 156 ~~g~~~ip~~~~~~LkpgG~Lvv 178 (322)
T PRK13943 156 TVGVDEVPETWFTQLKEGGRVIV 178 (322)
T ss_pred CCchHHhHHHHHHhcCCCCEEEE
Confidence 88866556678899999999876
No 184
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0054 Score=55.32 Aligned_cols=75 Identities=21% Similarity=0.269 Sum_probs=56.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--cEE---EeCCCHHHHHHh-------cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--DKF---VVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~---v~~~~~~~~~~~-------~~~~d 246 (344)
.|.++||+|+ |++|.++++.+...|++|++++++.++++.+.++++. ... .|..+.+.+.+. .+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999999999999999998887776566652 211 455555443322 26799
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999884
No 185
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.04 E-value=0.019 Score=43.98 Aligned_cols=97 Identities=20% Similarity=0.212 Sum_probs=64.3
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCccEEEEC
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDFIIDT 251 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~dvvid~ 251 (344)
+.++++++-+|+|. |..+..+++..+ .+|+.++.++...+.+.+ .++.. .++..+...........+|+++..
T Consensus 17 ~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~ 95 (124)
T TIGR02469 17 LRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIG 95 (124)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEEC
Confidence 36778899999875 888888898875 599999999887666532 33422 222222111111223579999875
Q ss_pred CCC---chhHHHHHHhcccCCEEEEEc
Q 019199 252 ASG---DHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 252 ~g~---~~~~~~~~~~l~~~G~iv~~g 275 (344)
.+. ...++.+.+.|+++|+++...
T Consensus 96 ~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 96 GSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 432 235788899999999998754
No 186
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.03 E-value=0.012 Score=56.51 Aligned_cols=75 Identities=17% Similarity=0.189 Sum_probs=53.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvv 248 (344)
+|.++||+|+ |++|...++.+...|++|+++++.. ++.+.+.++++.. ..+|..+.+.+.+. .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999998 9999999999999999999988743 3344443455543 33466665443332 2479999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
|++.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999883
No 187
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.02 E-value=0.0028 Score=56.72 Aligned_cols=76 Identities=22% Similarity=0.223 Sum_probs=54.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD 255 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~ 255 (344)
.+.+++|+|+|+.+.+++..+...|+ +|+++.|+.++.+.+.+.++... +......+.+.....++|+||+|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57889999999999999999999998 89999999998877766665321 111111112222335699999998753
No 188
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.02 E-value=0.03 Score=49.81 Aligned_cols=75 Identities=19% Similarity=0.205 Sum_probs=50.7
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGADK--FVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~ 244 (344)
.+.++||+|+ + ++|.+.++.+...|++|++++++++ +.+.+.++.|... ..|-.+.+.+.++ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 4 8999999999889999999887653 2233323445332 2355555443332 267
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++++.|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999998873
No 189
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.02 E-value=0.0056 Score=49.37 Aligned_cols=96 Identities=23% Similarity=0.263 Sum_probs=64.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~~ 256 (344)
..+.+++|+|+|.+|...++.+...| .+|++.+++.++.+.+.++++... .....+. .+..+++|+++.+++...
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPVGM 93 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCCCC
Confidence 45788999999999999998888886 589999999888777656666421 0111221 222467999999987643
Q ss_pred h----HHHHHHhcccCCEEEEEcCC
Q 019199 257 P----FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 257 ~----~~~~~~~l~~~G~iv~~g~~ 277 (344)
. .......++++..+++++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 94 KPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred CCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 1 11222446677777777543
No 190
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.01 E-value=0.0067 Score=51.89 Aligned_cols=99 Identities=23% Similarity=0.221 Sum_probs=65.9
Q ss_pred hccCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCcc
Q 019199 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLD 246 (344)
Q Consensus 174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~d 246 (344)
....+++|++||-+|+|. |+.+..+++..+ .+|+.++.+++-.+.+++. .|.. .++..+..... .....||
T Consensus 70 ~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD 147 (212)
T PRK13942 70 ELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYD 147 (212)
T ss_pred HHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcC
Confidence 344458999999999864 777888888765 5899999998876655433 3422 22222211111 0125699
Q ss_pred EEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199 247 FIIDTASGDHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 247 vvid~~g~~~~~~~~~~~l~~~G~iv~~ 274 (344)
+++-..........+++.|+++|+++..
T Consensus 148 ~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 148 RIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred EEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 9976555555578889999999998764
No 191
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.00 E-value=0.015 Score=49.51 Aligned_cols=99 Identities=22% Similarity=0.168 Sum_probs=65.5
Q ss_pred hccCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---hCCCc---EEEeCCCHHHHHHhcCCc
Q 019199 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALS---LLGAD---KFVVSSDLEQMKALGKSL 245 (344)
Q Consensus 174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~~~~~~ 245 (344)
+...++++++||-+|+|. |..+..+++..+ .+|+.++.+++..+.+.+ ..+.. .++..+..+.+. ..+.|
T Consensus 66 ~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~f 143 (205)
T PRK13944 66 ELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPF 143 (205)
T ss_pred HhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCc
Confidence 333458899999999864 777888888764 589999999886655533 33421 222222111111 12579
Q ss_pred cEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 274 (344)
|+++-+.........+.+.|+++|+++..
T Consensus 144 D~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 144 DAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred cEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 99987666555467888999999999764
No 192
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.00 E-value=0.0066 Score=54.57 Aligned_cols=75 Identities=23% Similarity=0.291 Sum_probs=50.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc---hhHHHHHHhCCC---c---EEEeCCCHHHHHHhcCCccEE
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST---SKKEEALSLLGA---D---KFVVSSDLEQMKALGKSLDFI 248 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~---~~~~~~~~~~g~---~---~~v~~~~~~~~~~~~~~~dvv 248 (344)
-.+.+++|+|+|++|.+++..+...|+ +|+++.++. ++.+.+.+++.. . ...+..+.+.+.+....+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 357889999999999998888888999 499999886 555554344421 1 123333333333334568999
Q ss_pred EECCC
Q 019199 249 IDTAS 253 (344)
Q Consensus 249 id~~g 253 (344)
++++.
T Consensus 204 INaTp 208 (289)
T PRK12548 204 VNATL 208 (289)
T ss_pred EEeCC
Confidence 99885
No 193
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.00 E-value=0.028 Score=52.44 Aligned_cols=100 Identities=26% Similarity=0.376 Sum_probs=70.3
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
-.+.++||+|+|-+|..++..+...|. +|+++-|+.++...+.+++|+..+ . .+.+...-..+|+||.+++.+.-
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~---l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A---LEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c---HHHHHHhhhhCCEEEEecCCCcc
Confidence 367889999999999999999999997 899999999998888789995432 2 22223333569999999886531
Q ss_pred ---HHHHHHhcccC-C-EEEEEcCCCcccc
Q 019199 258 ---FDAYMSLLKVA-G-VYVLVGFPSKVKF 282 (344)
Q Consensus 258 ---~~~~~~~l~~~-G-~iv~~g~~~~~~~ 282 (344)
-....+.++.. . -+++++.+.+..-
T Consensus 252 ii~~~~ve~a~~~r~~~livDiavPRdie~ 281 (414)
T COG0373 252 IITREMVERALKIRKRLLIVDIAVPRDVEP 281 (414)
T ss_pred ccCHHHHHHHHhcccCeEEEEecCCCCCCc
Confidence 22333344332 2 4677777744443
No 194
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.97 E-value=0.021 Score=49.75 Aligned_cols=75 Identities=23% Similarity=0.189 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--Cc---EEEeCCCHHHHHHh-------cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--AD---KFVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~---~~v~~~~~~~~~~~-------~~~~d 246 (344)
.+.++||+|+ |.+|..+++.+...|++|+++++++++.+.+...+. .. ...|..+.+.+.+. .+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999998 999999999988889999999999887665533332 11 12244444443322 25789
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998874
No 195
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.97 E-value=0.0057 Score=59.25 Aligned_cols=73 Identities=18% Similarity=0.233 Sum_probs=55.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~ 256 (344)
.+|++|+|+|.|..|++++.+++..|++|++.+..+++.+.+ +++|.......+..+.+ ..+|+|+.+.|-+.
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~~l----~~~D~VV~SpGi~~ 82 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQQI----ADYALVVTSPGFRP 82 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHhHh----hcCCEEEECCCCCC
Confidence 578899999999999999999999999999999777666655 56787433222222222 45899999998654
No 196
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.96 E-value=0.027 Score=50.14 Aligned_cols=98 Identities=19% Similarity=0.193 Sum_probs=65.2
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGADK--FVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~ 244 (344)
.|.++||+|+ +++|+++++.+...|++|+++++++ ++.+.+.++++... ..|-.+.+.+.+. .++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4678999986 4899999998888999999988874 23444434455332 3455555443322 267
Q ss_pred ccEEEECCCCch-----------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199 245 LDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 245 ~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+|+++++.|... ..+.++..++.+|+|+.++..
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~ 145 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL 145 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence 999999887410 123444556677999988654
No 197
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.95 E-value=0.0055 Score=57.52 Aligned_cols=93 Identities=23% Similarity=0.230 Sum_probs=66.7
Q ss_pred EEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHh-CC---CcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199 184 LGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSL-LG---ADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 184 vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~-~g---~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
|+|+|+|.+|..+++.+..... +|++.+++.++.+.+.++ .+ ....+|..+.+.+.++.++.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 6788999999999999887764 899999999998777544 22 23456777777788877888999999987654
Q ss_pred HHHHHHhcccCCEEEEEcC
Q 019199 258 FDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 258 ~~~~~~~l~~~G~iv~~g~ 276 (344)
..-+-.|++.+-.+++.+.
T Consensus 81 ~~v~~~~i~~g~~yvD~~~ 99 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDTSY 99 (386)
T ss_dssp HHHHHHHHHHT-EEEESS-
T ss_pred HHHHHHHHHhCCCeeccch
Confidence 6666677888888888643
No 198
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.017 Score=50.22 Aligned_cols=75 Identities=20% Similarity=0.157 Sum_probs=52.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
++.+++|+|+ |++|...+..+...|++|+++++++++.....++ .+.. ...|-.+.+.+.+. .+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999999988999999998887765544332 2322 12244555443322 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999875
No 199
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.94 E-value=0.021 Score=50.02 Aligned_cols=75 Identities=20% Similarity=0.214 Sum_probs=52.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+.+ |... ..|..+.+.+.+. .+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4688999998 99999999988888999999999887665443332 3211 2245554443332 2578
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999998874
No 200
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0082 Score=52.18 Aligned_cols=76 Identities=18% Similarity=0.200 Sum_probs=56.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh---cCCccEEEECCC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL---GKSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~---~~~~dvvid~~g 253 (344)
..+.+++|+|+ |++|...++.+...|++|++++++.++.+.+.+..+... ..|..+.+.+.+. .+++|++|++.|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 35678999998 999999999999999999999998887766655555433 2355555544332 256899999887
Q ss_pred C
Q 019199 254 G 254 (344)
Q Consensus 254 ~ 254 (344)
.
T Consensus 87 ~ 87 (245)
T PRK07060 87 I 87 (245)
T ss_pred C
Confidence 4
No 201
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.03 Score=49.81 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=54.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv 248 (344)
.+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+..+.. ...|..+.+.+.+. .+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3567999998 99999999999889999999999988776664333321 12355555444332 1468999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
+++.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999885
No 202
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.93 E-value=0.011 Score=52.72 Aligned_cols=93 Identities=20% Similarity=0.214 Sum_probs=65.2
Q ss_pred chhhhHhHHHHHhccCCCCCCEEEEECCCh-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH
Q 019199 162 LCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240 (344)
Q Consensus 162 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 240 (344)
+|+-......+......-.|.+++|+|+|+ +|...+.++...|++|+++.+....+..
T Consensus 140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~--------------------- 198 (283)
T PRK14192 140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPE--------------------- 198 (283)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHH---------------------
Confidence 443333333444444446899999999976 9999999999999999888764332221
Q ss_pred hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 241 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
..+++|++++++|.+..+. .+.++++..++++|..
T Consensus 199 ~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n 233 (283)
T PRK14192 199 LVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFH 233 (283)
T ss_pred HhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEe
Confidence 1146899999998766332 3568999999888865
No 203
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0068 Score=55.60 Aligned_cols=75 Identities=20% Similarity=0.296 Sum_probs=55.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|.+.++.+...|++|+++++++++++.+.+ ..|.+. ..|..+.+.+.+. .+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5678999998 999999999999999999999999887765433 345432 2355555544332 2679
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|++.|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999873
No 204
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.92 E-value=0.0044 Score=56.70 Aligned_cols=93 Identities=19% Similarity=0.163 Sum_probs=65.5
Q ss_pred CCCCEEEEECCChHHHHHHHHH-HHCCC-eEEEEeCCchhHHHHHHhC----CCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFG-KAFGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a-~~~g~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~dvvid~~ 252 (344)
+...+++|+|+|..|.+.+..+ ...++ +|.+.++++++.+.+.+++ +... ....+. ++.-.+.|+|+.++
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~~---~~~~~~aDiVi~aT 200 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNSA---DEAIEEADIIVTVT 200 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCCH---HHHHhcCCEEEEcc
Confidence 5567899999999998777554 45677 8899999988876665433 4332 223332 22235799999999
Q ss_pred CCchhHHHHHHhcccCCEEEEEcCC
Q 019199 253 SGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 253 g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
++.+.+ .. +.++++-.+..+|..
T Consensus 201 ~s~~p~-i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 201 NAKTPV-FS-EKLKKGVHINAVGSF 223 (325)
T ss_pred CCCCcc-hH-HhcCCCcEEEecCCC
Confidence 876533 33 899999999999875
No 205
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.90 E-value=0.0055 Score=54.46 Aligned_cols=103 Identities=25% Similarity=0.261 Sum_probs=60.9
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCC--cEEEeCCCHHHHHHhcC
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGA--DKFVVSSDLEQMKALGK 243 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~--~~~v~~~~~~~~~~~~~ 243 (344)
+..+.+...+++|++||-+|+| .|-.++.+++..|++|+.++.+++..+.+++ +.|. ...+...+.. +...
T Consensus 51 ~~~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~---~~~~ 126 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYR---DLPG 126 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GG---G---
T ss_pred HHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeecc---ccCC
Confidence 4445555567999999999987 5777888998889999999999887766532 3442 1122222221 2234
Q ss_pred CccEEEE-----CCCCc---hhHHHHHHhcccCCEEEEEc
Q 019199 244 SLDFIID-----TASGD---HPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 244 ~~dvvid-----~~g~~---~~~~~~~~~l~~~G~iv~~g 275 (344)
.||.|+. .+|.. ..+..+.+.|+|+|+++.-.
T Consensus 127 ~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 127 KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 7888754 44422 33778888999999997443
No 206
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.89 E-value=0.007 Score=54.08 Aligned_cols=95 Identities=21% Similarity=0.275 Sum_probs=63.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
..+.+++|+|+|++|.+++..+...|+ +|+++.++.++.+.+.++++....+... . ...+...++|+++++++....
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~-~~~~~~~~~DivInaTp~g~~ 198 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-L-ELQEELADFDLIINATSAGMS 198 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-c-cchhccccCCEEEECCcCCCC
Confidence 457789999999999999999999995 9999999998887776665522101110 0 111223569999999874320
Q ss_pred -----HHHHHHhcccCCEEEEEc
Q 019199 258 -----FDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 258 -----~~~~~~~l~~~G~iv~~g 275 (344)
.......+++...++++-
T Consensus 199 ~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 199 GELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred CCCCCCCCCHHHcCCCCEEEEee
Confidence 011235566666666663
No 207
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.88 E-value=0.0074 Score=51.59 Aligned_cols=93 Identities=22% Similarity=0.312 Sum_probs=63.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCCCcEEEeCCCHH--HHHHhcCCccEEEE---
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGADKFVVSSDLE--QMKALGKSLDFIID--- 250 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~~~v~~~~~~--~~~~~~~~~dvvid--- 250 (344)
-+|.+||-+|+|+ |+...-+|+ +|++|+.+|-+++-.+.++ .+-|.. +++.... .+...++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEV 133 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEV 133 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhH
Confidence 4788999999953 666666665 6799999999999877773 122322 4454432 23333478999964
Q ss_pred --CCCCch-hHHHHHHhcccCCEEEEEc
Q 019199 251 --TASGDH-PFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 251 --~~g~~~-~~~~~~~~l~~~G~iv~~g 275 (344)
.+..+. .++...++++|+|.++..-
T Consensus 134 lEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 134 LEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred HHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 555544 3677888999999997663
No 208
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.86 E-value=0.0055 Score=54.86 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=52.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC----CcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG----ADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~dvvid~~g 253 (344)
..+.+|+|+|+|+.|.+++..+...|+ +|++++++.++.+.+.+.++ ...+....+ +.+...++|++|+++.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~---~~~~~~~aDiVInaTp 201 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD---LAAALAAADGLVHATP 201 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc---hHhhhCCCCEEEECCc
Confidence 456889999999999999999999998 89999999988877755543 122222221 1222356999999964
No 209
>PLN00203 glutamyl-tRNA reductase
Probab=96.86 E-value=0.013 Score=56.70 Aligned_cols=98 Identities=19% Similarity=0.302 Sum_probs=65.9
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch--h
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--P 257 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--~ 257 (344)
+.+|+|+|+|.+|.+++..+...|+ +|+++.++.++.+.+.+.++... +.....+...+...++|+||.+++.+. .
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al~~aDVVIsAT~s~~pvI 344 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACAAEADVVFTSTSSETPLF 344 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHHhcCCEEEEccCCCCCee
Confidence 6889999999999999999999998 79999999998887766664221 111222223333467999999987543 2
Q ss_pred HHHHHHhccc----CC---EEEEEcCCCc
Q 019199 258 FDAYMSLLKV----AG---VYVLVGFPSK 279 (344)
Q Consensus 258 ~~~~~~~l~~----~G---~iv~~g~~~~ 279 (344)
....++.+.+ .+ .+++++.+.+
T Consensus 345 ~~e~l~~~~~~~~~~~~~~~~IDLAvPRd 373 (519)
T PLN00203 345 LKEHVEALPPASDTVGGKRLFVDISVPRN 373 (519)
T ss_pred CHHHHHHhhhcccccCCCeEEEEeCCCCC
Confidence 3344444422 12 4677777643
No 210
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.015 Score=50.29 Aligned_cols=75 Identities=23% Similarity=0.178 Sum_probs=52.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---cEE--EeCCCHHHHHH----h---cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKF--VVSSDLEQMKA----L---GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~~--v~~~~~~~~~~----~---~~~~d 246 (344)
.+.+++|+|+ |.+|..+++.+...|++|+++++++++...+.+.+.. -+. .|..+.+.+.+ . .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999998 9999999998888899999999988776655444431 111 24444443322 1 24799
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998764
No 211
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.012 Score=51.70 Aligned_cols=75 Identities=21% Similarity=0.180 Sum_probs=55.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFIID 250 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvid 250 (344)
.|.++||+|+ |++|.+.++.+...|++|+++++++++.+...++++.. ...|..+++.+.+. .+++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999998 99999999999989999999999887766554555532 23455555444332 257899999
Q ss_pred CCCC
Q 019199 251 TASG 254 (344)
Q Consensus 251 ~~g~ 254 (344)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8874
No 212
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.84 E-value=0.0063 Score=54.09 Aligned_cols=82 Identities=22% Similarity=0.333 Sum_probs=57.5
Q ss_pred HHHHHhcc--CCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcE----EEeCCCHHHHHHh
Q 019199 169 YTPMMRHK--MNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK----FVVSSDLEQMKAL 241 (344)
Q Consensus 169 ~~~l~~~~--~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~~ 241 (344)
+.+|.+.. ...+|++++|+|+|+.+.+++..++..|+ +|+++.|+.+|.+.+.+.++... .....+.+. .
T Consensus 112 ~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~---~ 188 (283)
T COG0169 112 LRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEG---L 188 (283)
T ss_pred HHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccc---c
Confidence 44455433 22468999999999999999999999997 89999999999888866666321 111111111 0
Q ss_pred cCCccEEEECCCC
Q 019199 242 GKSLDFIIDTASG 254 (344)
Q Consensus 242 ~~~~dvvid~~g~ 254 (344)
..+|+++|+++.
T Consensus 189 -~~~dliINaTp~ 200 (283)
T COG0169 189 -EEADLLINATPV 200 (283)
T ss_pred -cccCEEEECCCC
Confidence 158999998874
No 213
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.81 E-value=0.011 Score=52.27 Aligned_cols=75 Identities=21% Similarity=0.135 Sum_probs=54.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv 248 (344)
.+.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+.+.+.+. .+++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4678999998 99999999999889999999999988877765555532 12344444433221 2579999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
+++.|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 998873
No 214
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0098 Score=52.08 Aligned_cols=74 Identities=26% Similarity=0.195 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCC-cEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGA-DKFVVSSDLEQMKALGKSLDFIIDTASG 254 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g~ 254 (344)
.+.+++|+|+ |++|.+.++.+...|++|++++++.. +.+.. ..... ....|-.+.+.+.+..+++|+++++.|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN-DESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh-ccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4678999998 99999999999889999999988763 22222 11111 1234555666555555679999999874
No 215
>PRK09242 tropinone reductase; Provisional
Probab=96.80 E-value=0.039 Score=48.42 Aligned_cols=75 Identities=20% Similarity=0.258 Sum_probs=52.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCcE---EEeCCCHHHHHH-------hcC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GADK---FVVSSDLEQMKA-------LGK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~~~-------~~~ 243 (344)
.|.++||+|+ |++|...+..+...|++|++++++.++.+.+.+++ +.+. ..|..+.+.+.+ ..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4778999998 99999999999999999999999887765553332 2221 224444433322 126
Q ss_pred CccEEEECCCC
Q 019199 244 SLDFIIDTASG 254 (344)
Q Consensus 244 ~~dvvid~~g~ 254 (344)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999974
No 216
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.79 E-value=0.053 Score=47.79 Aligned_cols=74 Identities=15% Similarity=0.221 Sum_probs=49.1
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGADK--FVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~ 244 (344)
.|.++||+|+ + ++|.+.++.+...|++|++.+++++ ..+.+.++.|... .+|-.+++.+.+. .++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678899987 4 7999988888888999998887632 2333333345332 2455565443332 257
Q ss_pred ccEEEECCC
Q 019199 245 LDFIIDTAS 253 (344)
Q Consensus 245 ~dvvid~~g 253 (344)
+|+++++.|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999876
No 217
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.78 E-value=0.012 Score=52.51 Aligned_cols=74 Identities=16% Similarity=0.259 Sum_probs=51.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC----CcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG----ADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~dvvid~~g 253 (344)
..+.+++|+|+|+.+.+++..+...|+ +++++.++.++.+.+.+.+. ...+ ...+.....+....+|+++|++.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecCHhHHHHHHhhcCEEEEcCC
Confidence 457889999999999999988888998 89999999888777755542 2111 11111111222246999999886
No 218
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.77 E-value=0.017 Score=52.63 Aligned_cols=94 Identities=26% Similarity=0.202 Sum_probs=64.6
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhcCCccEEEECCCCch----
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALGKSLDFIIDTASGDH---- 256 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~~~~dvvid~~g~~~---- 256 (344)
+|+|+|+ |.+|..++..+...|.+|++++++.++...+ ...+.+.+. |..+++.+.+.-.++|+||.+++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6899998 9999999999988999999999987655443 344544322 44566666666678999999875321
Q ss_pred --------hHHHHHHhcccCC--EEEEEcCC
Q 019199 257 --------PFDAYMSLLKVAG--VYVLVGFP 277 (344)
Q Consensus 257 --------~~~~~~~~l~~~G--~iv~~g~~ 277 (344)
....+++.++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1134555554444 78877653
No 219
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.055 Score=47.97 Aligned_cols=72 Identities=19% Similarity=0.236 Sum_probs=50.6
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc----EEEeCCCHHHHHHh-------cCCccE
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD----KFVVSSDLEQMKAL-------GKSLDF 247 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~----~~v~~~~~~~~~~~-------~~~~dv 247 (344)
+++|+|+ |++|..+++.+...|++|++++++++..+.+.++ .+.. ...|..+.+.+.+. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6889987 9999999999888999999999887765444222 2332 23455665443321 257999
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++++.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999874
No 220
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.03 Score=49.23 Aligned_cols=73 Identities=22% Similarity=0.243 Sum_probs=53.0
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-C---cEEEeCCCHHHHHHh--------cCCccEE
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-A---DKFVVSSDLEQMKAL--------GKSLDFI 248 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~---~~~v~~~~~~~~~~~--------~~~~dvv 248 (344)
.++||+|+ |++|...++.+...|++|++++++.++.+.+.+..+ . ...+|..+.+.+.+. .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 46899998 999999999888899999999999888776644443 1 123455554433321 3578999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
+.+.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 998874
No 221
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.74 E-value=0.006 Score=53.87 Aligned_cols=108 Identities=22% Similarity=0.298 Sum_probs=73.5
Q ss_pred hHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCc-E-EEeCCCHHHHHH
Q 019199 166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD-K-FVVSSDLEQMKA 240 (344)
Q Consensus 166 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~-~v~~~~~~~~~~ 240 (344)
..++..+.+...+++|++||=+|+| -|..++.+|+..|++|+.++-+++..+.+.+ +.|.. . -+-..+ .+.
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d---~rd 133 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD---YRD 133 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc---ccc
Confidence 3456666667777999999999997 3778899999999999999999987766643 34533 1 111111 111
Q ss_pred hcCCccEEE-----ECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199 241 LGKSLDFII-----DTASG---DHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 241 ~~~~~dvvi-----d~~g~---~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
..+.||-++ +.+|. +.-+..+-+.|+++|++++-...
T Consensus 134 ~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 134 FEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred cccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 223477764 45554 23377888899999999876554
No 222
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.73 E-value=0.056 Score=47.23 Aligned_cols=75 Identities=21% Similarity=0.189 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |.+|...++.+...|++|+++++++++.+.+.++. +.. ...|..+.+.+.+. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999997 99999999988888999999999888665443332 322 22344554443322 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|.+.+.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998873
No 223
>PRK09186 flagellin modification protein A; Provisional
Probab=96.72 E-value=0.028 Score=49.17 Aligned_cols=74 Identities=22% Similarity=0.175 Sum_probs=52.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCc---E-EEeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD---K-FVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~-~v~~~~~~~~~~~-------~~ 243 (344)
.+.++||+|+ |++|...+..+...|++|+++++++++.+.+.+++ +.. . ..|-.+++.+.+. -+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4688999998 99999999999989999999998887765553333 221 1 2355555444332 25
Q ss_pred CccEEEECCC
Q 019199 244 SLDFIIDTAS 253 (344)
Q Consensus 244 ~~dvvid~~g 253 (344)
++|+++.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999875
No 224
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.70 E-value=0.016 Score=49.67 Aligned_cols=98 Identities=26% Similarity=0.256 Sum_probs=63.5
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCccE
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDF 247 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~dv 247 (344)
...++++++||-+|+|. |..++.+++..+. +|+.++.+++..+.+++ +.|.+ .++..+..+.. .....||+
T Consensus 72 ~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~ 149 (215)
T TIGR00080 72 LLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDR 149 (215)
T ss_pred HhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCE
Confidence 33458999999999863 7777788887654 69999998886655533 33432 12221111111 11246999
Q ss_pred EEECCCCchhHHHHHHhcccCCEEEEE
Q 019199 248 IIDTASGDHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 248 vid~~g~~~~~~~~~~~l~~~G~iv~~ 274 (344)
++-..........+.+.|+++|+++..
T Consensus 150 Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 150 IYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred EEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 875554444467888999999998754
No 225
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.70 E-value=0.054 Score=47.27 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=51.9
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEEEEC
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFIIDT 251 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvvid~ 251 (344)
+++|+|+ |++|.+.+..+...|++|+++++++++.+.+.+.++... ..|-.+.+.+.+. .+++|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5889997 999999999998899999999999887766644455322 2344454433221 2579999998
Q ss_pred CCC
Q 019199 252 ASG 254 (344)
Q Consensus 252 ~g~ 254 (344)
.|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 864
No 226
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.021 Score=49.75 Aligned_cols=98 Identities=26% Similarity=0.258 Sum_probs=62.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHH---HhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEAL---SLLGAD---KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~---~~~g~~---~~v~~~~~~~~~~~-------~~~ 244 (344)
.+.++||+|+ |++|...+..+...|++|+++.++.+ +.+.+. +..+.. ...|..+.+.+.+. .++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999998 99999999998889999998887653 333221 222322 12355555443322 246
Q ss_pred ccEEEECCCCc-------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199 245 LDFIIDTASGD-------------------HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 245 ~dvvid~~g~~-------------------~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+|+++.+.+.. ..++.+...+...|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89998877642 1234444445556899988653
No 227
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.014 Score=51.43 Aligned_cols=77 Identities=19% Similarity=0.175 Sum_probs=55.2
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc----EEEeCCCHHHHHHh-------cCCcc
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD----KFVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~----~~v~~~~~~~~~~~-------~~~~d 246 (344)
-++.++||+|+ |++|..++..+...|++|++++++.++.+.+.+..+.. ...|..+++.+.+. .+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999998 99999999999999999999999877666553333322 22344555443321 25799
Q ss_pred EEEECCCCc
Q 019199 247 FIIDTASGD 255 (344)
Q Consensus 247 vvid~~g~~ 255 (344)
+||.+.|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999988753
No 228
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.68 E-value=0.019 Score=51.54 Aligned_cols=86 Identities=14% Similarity=0.186 Sum_probs=52.8
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc---hhHHHHHHhCCCc----E-EEeCCCHHHHH
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST---SKKEEALSLLGAD----K-FVVSSDLEQMK 239 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~---~~~~~~~~~~g~~----~-~v~~~~~~~~~ 239 (344)
..++.....--.+.+++|+|+|+.+.+++..+...|+ +|+++.|++ ++.+.+.+.++.. . +....+.+.+.
T Consensus 112 ~~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~ 191 (288)
T PRK12749 112 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA 191 (288)
T ss_pred HHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhh
Confidence 3344433322366799999999889887777777898 899999985 3555554555421 1 11111111122
Q ss_pred HhcCCccEEEECCCC
Q 019199 240 ALGKSLDFIIDTASG 254 (344)
Q Consensus 240 ~~~~~~dvvid~~g~ 254 (344)
+...++|++++++.-
T Consensus 192 ~~~~~aDivINaTp~ 206 (288)
T PRK12749 192 EALASADILTNGTKV 206 (288)
T ss_pred hhcccCCEEEECCCC
Confidence 233579999998853
No 229
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.68 E-value=0.023 Score=47.52 Aligned_cols=97 Identities=21% Similarity=0.273 Sum_probs=61.4
Q ss_pred cCCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHH---HhCCCcE-EEeCCCHHHHHHhcCCccEEEE
Q 019199 176 KMNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEAL---SLLGADK-FVVSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~---~~~g~~~-~v~~~~~~~~~~~~~~~dvvid 250 (344)
..++++.+||-+|+|. |..++.+++.. +++|+.++.+++..+.++ ++.+.+. -+...+...... .+.+|+|+-
T Consensus 41 ~~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~ 118 (187)
T PRK00107 41 PYLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTS 118 (187)
T ss_pred hhcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEE
Confidence 3445689999999863 56666666544 569999999987665442 2344322 111122222211 357999986
Q ss_pred CCCC--chhHHHHHHhcccCCEEEEE
Q 019199 251 TASG--DHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 251 ~~g~--~~~~~~~~~~l~~~G~iv~~ 274 (344)
.... ...+..+.+.|+|+|+++.+
T Consensus 119 ~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 119 RAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred ccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 4322 24477888999999999977
No 230
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.044 Score=48.26 Aligned_cols=75 Identities=17% Similarity=0.215 Sum_probs=52.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--CCc-E--EEeCCCHHHHHHh------cCCccE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--GAD-K--FVVSSDLEQMKAL------GKSLDF 247 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~--~v~~~~~~~~~~~------~~~~dv 247 (344)
++.++||+|+ |++|...+..+...|++|+++++++++.+.+.+++ +.. . ..|..+.+.+.+. .+++|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999987 99999999998889999999999988776664442 211 1 2244444433221 257899
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9998874
No 231
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.66 E-value=0.017 Score=50.92 Aligned_cols=74 Identities=27% Similarity=0.212 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHH----h---cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKA----L---GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~----~---~~~~dvv 248 (344)
.+.+++|+|+ |++|.+.++.+...|++|++++++.++.+.+.+..+.. ...|..+.+.+.+ . .+++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999998 99999999999889999999999888776664444422 1234444433222 1 2578999
Q ss_pred EECCC
Q 019199 249 IDTAS 253 (344)
Q Consensus 249 id~~g 253 (344)
+++.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99886
No 232
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.015 Score=50.57 Aligned_cols=75 Identities=24% Similarity=0.199 Sum_probs=54.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHH-------hcCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKA-------LGKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~-------~~~~~dvv 248 (344)
++.+++|+|+ |++|.+.++.+...|++|+++++++++.+.+.++++... ..|..+.+.+.. ..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999998 999999999999999999999998877766656666432 124344333221 12579999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
|.+.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 998874
No 233
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.66 E-value=0.019 Score=50.95 Aligned_cols=95 Identities=18% Similarity=0.184 Sum_probs=72.1
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......+.....--.|.+|+|+|. +.+|.-+..++...|++|++..+....+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l--------------------- 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDL--------------------- 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCH---------------------
Confidence 467776666666666665468999999998 5669999999999999999865443222
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+..+.+|+++-++|.+..+.. +.++++..++++|..
T Consensus 196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin 232 (285)
T PRK14189 196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMN 232 (285)
T ss_pred HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEcccc
Confidence 2233569999999998874443 889999999999865
No 234
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.66 E-value=0.061 Score=47.82 Aligned_cols=75 Identities=20% Similarity=0.231 Sum_probs=50.7
Q ss_pred CCCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhCCCc--EEEeCCCHHHHHHh-------cC
Q 019199 179 QPGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGAD--KFVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 179 ~~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~ 243 (344)
-.|.++||+|+ +++|++.++.+...|++|+++.+++ ++.+.+.++++.. ...|-.+++.+.++ -+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 45678999986 5899999999888999998887653 3444444455532 22344554443322 25
Q ss_pred CccEEEECCC
Q 019199 244 SLDFIIDTAS 253 (344)
Q Consensus 244 ~~dvvid~~g 253 (344)
++|+++++.|
T Consensus 88 ~iD~lv~nAG 97 (272)
T PRK08159 88 KLDFVVHAIG 97 (272)
T ss_pred CCcEEEECCc
Confidence 7899999886
No 235
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.65 E-value=0.056 Score=47.32 Aligned_cols=75 Identities=19% Similarity=0.295 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+.+. .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999998 99999999999889999999999877665443332 3221 2344444433322 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 236
>PRK04457 spermidine synthase; Provisional
Probab=96.63 E-value=0.049 Score=48.18 Aligned_cols=95 Identities=21% Similarity=0.272 Sum_probs=66.3
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCC----c--EEEeCCCHHHHHHhcCCccEEE-E
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGA----D--KFVVSSDLEQMKALGKSLDFII-D 250 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~----~--~~v~~~~~~~~~~~~~~~dvvi-d 250 (344)
.+..+||++|+|+ |..+..+++.. +.+|++++.+++-.+.+++.++. . .++..+..+.+......+|+++ |
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4567899999864 77777777776 45999999999988888665552 1 2333333445555456799986 4
Q ss_pred CCCC---------chhHHHHHHhcccCCEEEEE
Q 019199 251 TASG---------DHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 251 ~~g~---------~~~~~~~~~~l~~~G~iv~~ 274 (344)
.... ...++.+.+.|+|+|.++.-
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 4221 24478888999999999864
No 237
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.62 E-value=0.018 Score=54.23 Aligned_cols=75 Identities=20% Similarity=0.206 Sum_probs=54.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--C-cEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--A-DKFVVSSDLEQMKALGKSLDFIIDTASG 254 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~-~~~v~~~~~~~~~~~~~~~dvvid~~g~ 254 (344)
.|.+++|+|+ |++|.+.+..+...|++|+++++++++.+...+..+ . ....|..+.+.+.+.-+++|++|++.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 4678999998 999999999888899999999988776543322211 1 1223556666665555789999998764
No 238
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.61 E-value=0.044 Score=48.11 Aligned_cols=75 Identities=17% Similarity=0.177 Sum_probs=52.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcEE---EeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKF---VVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |.+|..++..+...|++|+++++++++.+.+.+. .+.... .|..+.+.+.+. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999998 9999999999999999999999988765444333 343322 244444443322 2568
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998874
No 239
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.066 Score=47.56 Aligned_cols=74 Identities=18% Similarity=0.129 Sum_probs=52.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEEE
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFII 249 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvvi 249 (344)
+.++||+|+ |++|..+++.+...|++|++++++.++++.+.+..+... ..|..+.+.+.+. .+++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 457999997 999999999888889999999999887766644444221 2344444433221 25789999
Q ss_pred ECCCC
Q 019199 250 DTASG 254 (344)
Q Consensus 250 d~~g~ 254 (344)
.+.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99874
No 240
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.01 Score=53.38 Aligned_cols=75 Identities=24% Similarity=0.319 Sum_probs=52.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.+++|+|+ |++|.+.++.+...|++|++++++.++.+.+.+++ +.+. ..|-.+.+.+.+. .+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999998 99999999988888999999999987765553332 3221 2344454433322 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++++.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
No 241
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.57 E-value=0.026 Score=50.06 Aligned_cols=95 Identities=17% Similarity=0.128 Sum_probs=73.1
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
..||+....+..+.....--.|.+++|+|- ..+|.-+.+++...|+.|++..+....+
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l--------------------- 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNL--------------------- 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCH---------------------
Confidence 467777677777766655457999999997 5699999999999999999987653322
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
++..+.+|+++.++|.+..+.. +.++++..++++|..
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence 2233569999999998874433 789999999999854
No 242
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.57 E-value=0.006 Score=50.14 Aligned_cols=96 Identities=20% Similarity=0.245 Sum_probs=65.5
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC------------------CC--HHHHHH
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS------------------SD--LEQMKA 240 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~------------------~~--~~~~~~ 240 (344)
.-+|+|+|+|.+|+.|+.+++.+|++|++.+...++.+.. +..++..+... .. .....+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3778999999999999999999999999999999888777 56665544331 01 112222
Q ss_pred hcCCccEEEECCC--C---c-hhHHHHHHhcccCCEEEEEcCC
Q 019199 241 LGKSLDFIIDTAS--G---D-HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 241 ~~~~~dvvid~~g--~---~-~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
....+|++|.+.- + + ...+..++.|+++..|+++...
T Consensus 99 ~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D 141 (168)
T PF01262_consen 99 FIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD 141 (168)
T ss_dssp HHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred HHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence 3356899885331 1 1 1246778889999889888644
No 243
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.016 Score=51.18 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=53.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CC-c---EEEeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GA-D---KFVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~-~---~~v~~~~~~~~~~~-------~~ 243 (344)
.|.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+++ +. . ...|..+.+.+.+. .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4678999998 89999999999999999999999887765443322 21 1 12355555443322 25
Q ss_pred CccEEEECCCC
Q 019199 244 SLDFIIDTASG 254 (344)
Q Consensus 244 ~~dvvid~~g~ 254 (344)
++|+++++.|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 244
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.56 E-value=0.021 Score=50.75 Aligned_cols=77 Identities=13% Similarity=0.265 Sum_probs=55.0
Q ss_pred hHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCcc
Q 019199 168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD 246 (344)
Q Consensus 168 a~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d 246 (344)
...++..... ..+.+++|+|+|+.+.+++..++..|+ +|+++.|+.++.+.+.+.++... . +.. ....+|
T Consensus 110 f~~~L~~~~~-~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~d 180 (272)
T PRK12550 110 IAKLLASYQV-PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEAD 180 (272)
T ss_pred HHHHHHhcCC-CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCC
Confidence 3445554433 456789999999999999999999998 79999999998877766664221 1 011 124589
Q ss_pred EEEECCC
Q 019199 247 FIIDTAS 253 (344)
Q Consensus 247 vvid~~g 253 (344)
++++|+.
T Consensus 181 lvINaTp 187 (272)
T PRK12550 181 ILVNVTP 187 (272)
T ss_pred EEEECCc
Confidence 9999886
No 245
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.55 E-value=0.088 Score=46.33 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=62.7
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhC-CCc---EEEeCCCHHHHHH----h---c
Q 019199 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLL-GAD---KFVVSSDLEQMKA----L---G 242 (344)
Q Consensus 180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~-g~~---~~v~~~~~~~~~~----~---~ 242 (344)
.|.+++|+|+ +++|.++++.+...|++|++++++. ++++.+.++. +.. ...|-.+.+.+.+ + -
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 4678999986 5999999888888999999886543 3455554444 221 1234555443322 1 2
Q ss_pred CCccEEEECCCCch-----------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199 243 KSLDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 243 ~~~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+++|+++++.|... ..+.++..++++|+|+.++..
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~ 149 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYL 149 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEccc
Confidence 67999998876310 012344456677999988765
No 246
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.54 E-value=0.075 Score=46.59 Aligned_cols=74 Identities=16% Similarity=0.111 Sum_probs=48.5
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-c---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGLG---GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-D---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Gag---~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
.|++++|+|++ ++|.+.++.+...|++|+++.++++..+.+ +++.. . ..+|-.+.+.+.+. .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSL-QKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHH-HhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 46889999873 899999998888999999998874322333 33321 1 12344444433321 2679
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++++.|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999998873
No 247
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.54 E-value=0.076 Score=46.74 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=49.9
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHhCCCcEE--EeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGLG---GLGHMAVKFGKAFGLNVTVLSTSTSK---KEEALSLLGADKF--VVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Gag---~~G~~ai~~a~~~g~~V~~~~~~~~~---~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~ 244 (344)
.|.++||+|++ ++|.+.++.+...|++|++++++++. .+.+.++++.... .|-.+.+.+.+. -++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 47889999863 89999999888899999998887543 2333334443222 344444433322 257
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++++.|.
T Consensus 89 ld~lv~nAg~ 98 (258)
T PRK07533 89 LDFLLHSIAF 98 (258)
T ss_pred CCEEEEcCcc
Confidence 9999998873
No 248
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.51 E-value=0.032 Score=50.82 Aligned_cols=118 Identities=25% Similarity=0.303 Sum_probs=81.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE-CCCCchh
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID-TASGDHP 257 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid-~~g~~~~ 257 (344)
-.|.++-|+|.|.+|++.++.++.+|.+|...++... .+.. ++.++..+ + ++++-...|++.- +..++.+
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~-~~~~~~y~----~---l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAE-KELGARYV----D---LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHH-hhcCceec----c---HHHHHHhCCEEEEeCCCChHH
Confidence 3589999999999999999999999999999998876 2222 35554432 1 2333455888765 4445543
Q ss_pred H----HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEeCcc
Q 019199 258 F----DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPIEN 318 (344)
Q Consensus 258 ~----~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~ 318 (344)
. ...++.|++++.+|.++-..- -+-+.+++.+++|++..- ..+|-.|.
T Consensus 215 ~hLin~~~l~~mk~ga~lVNtaRG~~-------------VDe~ALi~AL~~g~i~gaglDV~e~Ep 267 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTARGGL-------------VDEQALIDALKSGKIAGAGLDVFENEP 267 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECCCccc-------------cCHHHHHHHHHhCCcceEEeeecCCCC
Confidence 2 366788999999998863321 235688888999988643 35554443
No 249
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.50 E-value=0.032 Score=48.24 Aligned_cols=99 Identities=25% Similarity=0.291 Sum_probs=70.7
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---c-EEEeCCCHHHHHHhcCCccEEEECC
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---D-KFVVSSDLEQMKALGKSLDFIIDTA 252 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---~-~~v~~~~~~~~~~~~~~~dvvid~~ 252 (344)
..+|++||-+|+| .|-.+..+++..|- +|+++|-+++.++.++++... . .-+...+.+.+.-....||++.-+.
T Consensus 49 ~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~f 127 (238)
T COG2226 49 IKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISF 127 (238)
T ss_pred CCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeee
Confidence 3589999999876 48899999998875 999999999999888666542 1 1111222222221135688886655
Q ss_pred CC------chhHHHHHHhcccCCEEEEEcCC
Q 019199 253 SG------DHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 253 g~------~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
|- +..++++.+.|+|+|+++.+.+.
T Consensus 128 glrnv~d~~~aL~E~~RVlKpgG~~~vle~~ 158 (238)
T COG2226 128 GLRNVTDIDKALKEMYRVLKPGGRLLVLEFS 158 (238)
T ss_pred hhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence 52 34588999999999999988766
No 250
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.017 Score=50.75 Aligned_cols=75 Identities=23% Similarity=0.216 Sum_probs=52.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCc---EEEeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD---KFVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~~v~~~~~~~~~~~-------~~ 243 (344)
.+.++||.|+ |++|.+++..+...|++|+++++++++.+.+.+++ +.. ...|..+++.+.+. .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678999998 99999999999899999999999887765553332 221 12244444433322 25
Q ss_pred CccEEEECCCC
Q 019199 244 SLDFIIDTASG 254 (344)
Q Consensus 244 ~~dvvid~~g~ 254 (344)
++|+++++.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999998873
No 251
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.49 E-value=0.037 Score=49.11 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=71.2
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......|.....--.|.+|+|+|.| .+|.-++.++...|+.|++.......+
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l--------------------- 194 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL--------------------- 194 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH---------------------
Confidence 4677766666666655543579999999985 999999999999999999886543322
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+..+.+|+++-++|.+..+. -+.++++..++++|..
T Consensus 195 ~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 195 SFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence 222356999999999887333 4578999999999864
No 252
>PRK06196 oxidoreductase; Provisional
Probab=96.49 E-value=0.018 Score=52.32 Aligned_cols=75 Identities=28% Similarity=0.386 Sum_probs=53.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-Cc-EEEeCCCHHHHHHh-------cCCccEEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-AD-KFVVSSDLEQMKAL-------GKSLDFII 249 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~~v~~~~~~~~~~~-------~~~~dvvi 249 (344)
.+.++||+|+ |++|.+++..+...|++|++++++.++.+.+.+++. .. ...|-.+.+.+.+. .+++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 4678999998 999999999888899999999999887665544432 21 12344555443332 25799999
Q ss_pred ECCCC
Q 019199 250 DTASG 254 (344)
Q Consensus 250 d~~g~ 254 (344)
++.|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 98873
No 253
>PRK07574 formate dehydrogenase; Provisional
Probab=96.48 E-value=0.051 Score=50.70 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=73.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH-
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF- 258 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~- 258 (344)
.|.+|.|+|.|.+|...++.++.+|.+|++.++.....+.. +.+|... ..+ ++++....|+|+.+.......
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~~~g~~~---~~~---l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-QELGLTY---HVS---FDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhH-hhcCcee---cCC---HHHHhhcCCEEEEcCCCCHHHH
Confidence 57889999999999999999999999999999875333322 3455321 112 334446689998877743212
Q ss_pred ----HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199 259 ----DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 259 ----~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (344)
...+..|+++..+|.++-..- -+-+.+++.+.+|++.
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aRG~i-------------VDe~AL~~AL~sG~i~ 304 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTARGKI-------------VDRDAVVRALESGHLA 304 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCCCch-------------hhHHHHHHHHHhCCcc
Confidence 346778899988888763311 1234566666666663
No 254
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.016 Score=52.66 Aligned_cols=75 Identities=28% Similarity=0.348 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----C-Cc---EEEeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----G-AD---KFVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g-~~---~~v~~~~~~~~~~~-------~~ 243 (344)
.|.+++|+|+ +++|.+++..+...|++|++++++.++.+.+.+++ + .. ..+|-.+.+.+++. .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4678999998 99999999988889999999999987765543332 2 11 12355555444332 25
Q ss_pred CccEEEECCCC
Q 019199 244 SLDFIIDTASG 254 (344)
Q Consensus 244 ~~dvvid~~g~ 254 (344)
++|++|++.|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 78999998873
No 255
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.03 Score=49.35 Aligned_cols=76 Identities=22% Similarity=0.275 Sum_probs=53.5
Q ss_pred CCCCEEEEECC-C-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCCcEE----EeCCCHHHHHHh-------
Q 019199 179 QPGKSLGVIGL-G-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGADKF----VVSSDLEQMKAL------- 241 (344)
Q Consensus 179 ~~g~~vlI~Ga-g-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~~----v~~~~~~~~~~~------- 241 (344)
..+.++||+|+ | ++|.++++.+...|++|+++++++++++...++ +|...+ .|..+.+.+.+.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999987 6 799999999999999999999887766544322 443222 244554433322
Q ss_pred cCCccEEEECCCC
Q 019199 242 GKSLDFIIDTASG 254 (344)
Q Consensus 242 ~~~~dvvid~~g~ 254 (344)
.+++|++|++.|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 2578999999984
No 256
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.46 E-value=0.022 Score=50.94 Aligned_cols=95 Identities=21% Similarity=0.203 Sum_probs=72.5
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......+...+.--.|.+|.|+|. +.+|.-.+.++...|++|++..+.....+
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~-------------------- 197 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK-------------------- 197 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH--------------------
Confidence 467776666666666555468999999998 59999999999999999999876543222
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+..|+|+-++|.+..+...+ ++++..++++|..
T Consensus 198 -e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 198 -ALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred -HHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 22345899999999887666554 8999999999855
No 257
>PRK06128 oxidoreductase; Provisional
Probab=96.45 E-value=0.12 Score=46.62 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=61.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh--HHH---HHHhCCCcEE---EeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK--KEE---ALSLLGADKF---VVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~---~~~~~g~~~~---v~~~~~~~~~~~-------~~ 243 (344)
.|.++||+|+ |++|.+++..+...|++|+++.++.+. .+. ..+..|.... .|-.+.+.+.+. .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4678999998 999999999998899999887654331 111 1233453222 244454433322 25
Q ss_pred CccEEEECCCCc--------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199 244 SLDFIIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 244 ~~dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
++|++|++.|.. ...+.++..++++|+++.++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~ 193 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI 193 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence 799999988731 0123344445677899988654
No 258
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.44 E-value=0.058 Score=42.74 Aligned_cols=95 Identities=13% Similarity=0.048 Sum_probs=70.4
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.++|........++..+.--.|.+++|+|. ..+|.-++.++...|++|+.+.+....++++
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~------------------ 68 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK------------------ 68 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH------------------
Confidence 456665555655665554468999999997 8999999999999999999998655433222
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+.+|+++-++|.+..+. -+.++++..++.+|..
T Consensus 69 ---v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~ 102 (140)
T cd05212 69 ---VHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPT 102 (140)
T ss_pred ---HhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCC
Confidence 245899999998876333 4568999999988755
No 259
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.43 E-value=0.037 Score=44.84 Aligned_cols=96 Identities=17% Similarity=0.239 Sum_probs=63.2
Q ss_pred cccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237 (344)
Q Consensus 159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 237 (344)
..+||+....+..+.....--.|.+++|+|. ..+|.-+..+++..|+.|+......+.++..
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~----------------- 76 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI----------------- 76 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH-----------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce-----------------
Confidence 4567776666777766665578999999997 7899999999999999999988776544433
Q ss_pred HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+.+|+++.++|.+..+. -+.++++..++++|..
T Consensus 77 ----~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 77 ----TRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGIN 110 (160)
T ss_dssp ----HTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred ----eeeccEEeeeeccccccc--cccccCCcEEEecCCc
Confidence 144888898888876332 3468888888888765
No 260
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.022 Score=50.31 Aligned_cols=76 Identities=20% Similarity=0.222 Sum_probs=53.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc-E--EEeCCCHHHHHHh-------cCC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-K--FVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~v~~~~~~~~~~~-------~~~ 244 (344)
-++.++||+|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+.+.+. .++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35788999998 89999999999889999999999887665543332 322 1 2355555544322 257
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|++|++.|.
T Consensus 88 id~vi~~Ag~ 97 (263)
T PRK07814 88 LDIVVNNVGG 97 (263)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 261
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.42 E-value=0.03 Score=48.78 Aligned_cols=74 Identities=24% Similarity=0.313 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
++.++||+|+ |++|+.+++.+...|++|++++++.++.+.+.++ .+.. ...|-.+.+.+.+. .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999998 9999999999988999999999987765544332 2432 22344444433221 2568
Q ss_pred cEEEECCC
Q 019199 246 DFIIDTAS 253 (344)
Q Consensus 246 dvvid~~g 253 (344)
|++|.+.|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 262
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.021 Score=50.00 Aligned_cols=75 Identities=17% Similarity=0.173 Sum_probs=53.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
.|.++||+|+ +++|.+.+..+...|++|++++++.++.+.+.+++ +.. ...|..+++.+.+. .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4788999998 99999999999999999999999887765553332 322 12344555443322 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++++.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998873
No 263
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.02 Score=50.96 Aligned_cols=75 Identities=20% Similarity=0.211 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.|.++||+|+ |++|.+.+..+...|++|++++++.++++.+.+++ |... ..|-.+.+.+.+. .+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 99999999999889999999998877665543332 3322 2344555443322 2578
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|++.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999998873
No 264
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.41 E-value=0.0053 Score=54.97 Aligned_cols=124 Identities=23% Similarity=0.303 Sum_probs=69.2
Q ss_pred cceEEEcCCCCCcccccccchhhhHh--HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 019199 143 ERYCYKIANDYPLALAAPLLCAGITV--YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEE 219 (344)
Q Consensus 143 ~~~~~~~P~~~~~~~aa~l~~~~~ta--~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~ 219 (344)
...++.+.+++.+-... ..+|. ...|.+. ..+|++||-+|+|+ |..++..++ +|+ +|++++-++.-.+.
T Consensus 128 ~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~ 199 (295)
T PF06325_consen 128 DEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEA 199 (295)
T ss_dssp TSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHH
T ss_pred CcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHH
Confidence 44567777666655443 22222 3334433 37889999999753 555555555 588 89999988775444
Q ss_pred HHH---hCCC-cEEEeCCCHHHHHHhcCCccEEEECCCCch---hHHHHHHhcccCCEEEEEcCC
Q 019199 220 ALS---LLGA-DKFVVSSDLEQMKALGKSLDFIIDTASGDH---PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 220 ~~~---~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g~~~---~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+++ .-|. +.+.-....+ ....+||+|+-+.-... ....+.+.++++|++++.|..
T Consensus 200 a~~N~~~N~~~~~~~v~~~~~---~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl 261 (295)
T PF06325_consen 200 ARENAELNGVEDRIEVSLSED---LVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGIL 261 (295)
T ss_dssp HHHHHHHTT-TTCEEESCTSC---TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeeEEEEEecc---cccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEcccc
Confidence 322 2231 2221111111 11267999987665433 134455678999999999865
No 265
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.40 E-value=0.026 Score=50.17 Aligned_cols=104 Identities=18% Similarity=0.119 Sum_probs=66.0
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---cEEEeCCCHHHHHHhcCCc
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKFVVSSDLEQMKALGKSL 245 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~ 245 (344)
..++.+......+.+++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.+.. ...+... . ....++
T Consensus 105 ~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~---~--~~~~~~ 179 (270)
T TIGR00507 105 VSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD---E--LPLHRV 179 (270)
T ss_pred HHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh---h--hcccCc
Confidence 3344433332457889999999999999988888899999999998877666555432 1222111 1 112469
Q ss_pred cEEEECCCCch--hH---HHHHHhcccCCEEEEEcCC
Q 019199 246 DFIIDTASGDH--PF---DAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 246 dvvid~~g~~~--~~---~~~~~~l~~~G~iv~~g~~ 277 (344)
|+++++++... .. ......++++..++++...
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~ 216 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN 216 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 99999998531 01 1123456777777777443
No 266
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.025 Score=49.58 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=52.3
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCc---EEEeCCCHHHHHHh-cCCccEEEECC
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD---KFVVSSDLEQMKAL-GKSLDFIIDTA 252 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~~-~~~~dvvid~~ 252 (344)
+.++||+|+ |++|..+++.+...|++|+++++++++...+.+ ..+.. ...|..+.+.+.+. ..++|++|.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 457999998 999999999999999999999988765544422 22321 22355566555443 35899999988
Q ss_pred C
Q 019199 253 S 253 (344)
Q Consensus 253 g 253 (344)
|
T Consensus 82 g 82 (257)
T PRK09291 82 G 82 (257)
T ss_pred C
Confidence 7
No 267
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.39 E-value=0.029 Score=48.44 Aligned_cols=82 Identities=21% Similarity=0.336 Sum_probs=63.9
Q ss_pred EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-hCCCcEE-EeCCCHHHHHHhc-CCccEEEECCCCchhHH
Q 019199 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS-LLGADKF-VVSSDLEQMKALG-KSLDFIIDTASGDHPFD 259 (344)
Q Consensus 183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~-~~g~~~~-v~~~~~~~~~~~~-~~~dvvid~~g~~~~~~ 259 (344)
.++|+|+|.+|...++.+...|..|++++.++++.+.... +++...+ .+..+++.+++.+ ..+|+++-+++... .+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N 80 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VN 80 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HH
Confidence 5788999999999999999999999999999999877423 3554333 3556778888875 88999999999865 55
Q ss_pred HHHHhc
Q 019199 260 AYMSLL 265 (344)
Q Consensus 260 ~~~~~l 265 (344)
..+-.+
T Consensus 81 ~i~~~l 86 (225)
T COG0569 81 SVLALL 86 (225)
T ss_pred HHHHHH
Confidence 554444
No 268
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.023 Score=49.79 Aligned_cols=76 Identities=21% Similarity=0.279 Sum_probs=53.7
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC-c--EEEeCCCHHHHHHh-------cCC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA-D--KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~--~~v~~~~~~~~~~~-------~~~ 244 (344)
..+.+++|+|+ |.+|..++..+...|++|+++++++++++.+...+ +. . ...|..+.+.+.+. .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45789999998 99999999999989999999999988765553332 21 1 22344444433322 257
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|++|++.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999998883
No 269
>PLN03139 formate dehydrogenase; Provisional
Probab=96.37 E-value=0.043 Score=51.20 Aligned_cols=109 Identities=20% Similarity=0.236 Sum_probs=72.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~ 258 (344)
-.|.+|.|+|.|.+|...++.++.+|.+|++.++.....+.. ++.|+... .+ ++++....|+|+.+.......
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~g~~~~---~~---l~ell~~sDvV~l~lPlt~~T 269 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KETGAKFE---ED---LDAMLPKCDVVVINTPLTEKT 269 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhcCceec---CC---HHHHHhhCCEEEEeCCCCHHH
Confidence 368899999999999999999999999999988765433333 35554321 12 233335589998877643212
Q ss_pred -----HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199 259 -----DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI 307 (344)
Q Consensus 259 -----~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 307 (344)
...++.|+++..+|.++-..- -+-+.+++.+.+|++
T Consensus 270 ~~li~~~~l~~mk~ga~lIN~aRG~i-------------VDe~AL~~AL~sG~l 310 (386)
T PLN03139 270 RGMFNKERIAKMKKGVLIVNNARGAI-------------MDTQAVADACSSGHI 310 (386)
T ss_pred HHHhCHHHHhhCCCCeEEEECCCCch-------------hhHHHHHHHHHcCCc
Confidence 346778899988888763311 124566666666666
No 270
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.36 E-value=0.049 Score=49.96 Aligned_cols=107 Identities=21% Similarity=0.334 Sum_probs=72.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh--
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP-- 257 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~-- 257 (344)
.|.+|.|+|.|.+|...++.++.+|.+|++.++..+... . +..|.. ..+ +.++....|+|+-++.....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~-~~~~~~----~~~---l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEA-E-KELGAE----YRP---LEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChhh-H-HHcCCE----ecC---HHHHHhhCCEEEEeCCCChHHh
Confidence 678999999999999999999999999999988755432 2 344532 112 22333558999888764321
Q ss_pred ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199 258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (344)
-...+..++++..++.++-..- -+-+.+++.+.+|++.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg~~-------------vd~~aL~~aL~~g~i~ 260 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARGKV-------------VDTKALVKALKEGWIA 260 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCchh-------------cCHHHHHHHHHcCCeE
Confidence 2366788899998888863311 1235666667777663
No 271
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.14 Score=44.49 Aligned_cols=72 Identities=17% Similarity=0.052 Sum_probs=48.8
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-C-cEEEeCCCHHHHHHh----cCCccEEEECCC
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-A-DKFVVSSDLEQMKAL----GKSLDFIIDTAS 253 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~-~~~v~~~~~~~~~~~----~~~~dvvid~~g 253 (344)
.+++|+|+ |++|...+..+...|++|+++++++++.+.+.+... . -...|-.+.+.+.+. ..+.|+++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 46889987 999999888888889999999999887766633222 1 123455565544443 234677766654
No 272
>PRK05717 oxidoreductase; Validated
Probab=96.35 E-value=0.034 Score=48.75 Aligned_cols=76 Identities=21% Similarity=0.210 Sum_probs=53.4
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHH----h---cCCccE
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKA----L---GKSLDF 247 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~----~---~~~~dv 247 (344)
..|.++||+|+ |++|..++..+...|++|++++++.++.....++++... ..|-.+.+.+.+ . -+++|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45788999987 999999999988889999999888776655544555321 234445443322 2 256899
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
+|.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9998874
No 273
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.34 E-value=0.12 Score=45.62 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=48.0
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhCCCc--EEEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGAD--KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~~ 244 (344)
.|.++||+|+ + ++|.+.++.+...|++|++.++++ +..+.+..+.+.. ...|-.+.+.+.+. -++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 4678999987 3 799998888888999999887763 2223332222321 22355555444332 256
Q ss_pred ccEEEECCC
Q 019199 245 LDFIIDTAS 253 (344)
Q Consensus 245 ~dvvid~~g 253 (344)
+|+++++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999887
No 274
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.34 E-value=0.016 Score=45.06 Aligned_cols=81 Identities=17% Similarity=0.245 Sum_probs=52.2
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS-TSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD 259 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~ 259 (344)
--+|-|+|+|.+|..+...++..|..|..+... .+..+.+...++...+.+.. +....+|++|-++.... +.
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~------~~~~~aDlv~iavpDda-I~ 82 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLE------EILRDADLVFIAVPDDA-IA 82 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TT------GGGCC-SEEEE-S-CCH-HH
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccc------cccccCCEEEEEechHH-HH
Confidence 356888999999999999999999998877544 44555554555654443322 23467999999999886 88
Q ss_pred HHHHhcccC
Q 019199 260 AYMSLLKVA 268 (344)
Q Consensus 260 ~~~~~l~~~ 268 (344)
.+++.|...
T Consensus 83 ~va~~La~~ 91 (127)
T PF10727_consen 83 EVAEQLAQY 91 (127)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHHh
Confidence 888888654
No 275
>PLN03075 nicotianamine synthase; Provisional
Probab=96.33 E-value=0.044 Score=48.95 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=68.7
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhCCC----c--EEEeCCCHHHHHHhc
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGA----D--KFVVSSDLEQMKALG 242 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~----~--~~v~~~~~~~~~~~~ 242 (344)
.+..... .+.++|+-+|+|..++.++.+++.. +.+++.++.+++..+.+++.+.. . ..|...+........
T Consensus 115 ~L~~~~~-~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l 193 (296)
T PLN03075 115 LLSQHVN-GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESL 193 (296)
T ss_pred HHHHhhc-CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhccccc
Confidence 3434444 4778999999999999888888655 34899999999988777554422 1 111112211111113
Q ss_pred CCccEEEECC-------CCchhHHHHHHhcccCCEEEEEc
Q 019199 243 KSLDFIIDTA-------SGDHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 243 ~~~dvvid~~-------g~~~~~~~~~~~l~~~G~iv~~g 275 (344)
++||+||-.+ .-...++.+.+.|+|+|.++.-.
T Consensus 194 ~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 194 KEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 6799998664 12334788999999999998764
No 276
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.32 E-value=0.089 Score=38.49 Aligned_cols=86 Identities=20% Similarity=0.271 Sum_probs=59.8
Q ss_pred EEEEECCChHHHHHHHHHHHCC---CeEEEE-eCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199 183 SLGVIGLGGLGHMAVKFGKAFG---LNVTVL-STSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (344)
Q Consensus 183 ~vlI~Gag~~G~~ai~~a~~~g---~~V~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~ 258 (344)
++.++|+|.+|.+.+.-+...| .+|+++ .+++++.+.+.++++..... .+..+.++ ..|++|-++.-.. +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~----~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEEAAQ----EADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHHHHH----HTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHHhhc----cCCEEEEEECHHH-H
Confidence 4667899999999999999888 789855 99999988887888854332 12223332 4899999998665 6
Q ss_pred HHHHHhc---ccCCEEEEE
Q 019199 259 DAYMSLL---KVAGVYVLV 274 (344)
Q Consensus 259 ~~~~~~l---~~~G~iv~~ 274 (344)
..+++.+ .++..++++
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 6666554 455566554
No 277
>PRK06194 hypothetical protein; Provisional
Probab=96.32 E-value=0.024 Score=50.60 Aligned_cols=75 Identities=24% Similarity=0.375 Sum_probs=52.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|..++..+...|++|++++++.++++...+++ +... ..|..+.+.+.+. .+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999987 99999999988889999999998876655443332 3221 2244444443332 2568
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|.+.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999998875
No 278
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.31 E-value=0.032 Score=47.73 Aligned_cols=97 Identities=18% Similarity=0.080 Sum_probs=63.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE--------------e--CCCHHHHH-Hh
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--------------V--SSDLEQMK-AL 241 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v--------------~--~~~~~~~~-~~ 241 (344)
.++.+||+.|+|. |.-++.+|+ .|.+|++++-++.-++.+.++.+..... + ..+..... ..
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 5677999999873 788888875 6999999999998777654444421100 0 00000000 11
Q ss_pred cCCccEEEECCCC--------chhHHHHHHhcccCCEEEEEcCC
Q 019199 242 GKSLDFIIDTASG--------DHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 242 ~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+.+|.++|...- ...++.+.+.|+|+|+++..+..
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 2458999996531 12367888999999998777654
No 279
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.056 Score=48.14 Aligned_cols=96 Identities=24% Similarity=0.274 Sum_probs=60.9
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh------cCCccEE
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL------GKSLDFI 248 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~------~~~~dvv 248 (344)
+.+++|.|+|++|.+++..+. .|++|+++++++++++.+.+++ |.. ...|-.+.+.+.+. .+++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 357888899999999888885 7999999999877665443332 322 12355555433222 2579999
Q ss_pred EECCCCch---h---------------HHHHHHhcccCCEEEEEcCC
Q 019199 249 IDTASGDH---P---------------FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 249 id~~g~~~---~---------------~~~~~~~l~~~G~iv~~g~~ 277 (344)
+++.|... . ++.++..++.+|+++.++..
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 99988431 1 22333445566777766544
No 280
>PRK07985 oxidoreductase; Provisional
Probab=96.31 E-value=0.16 Score=45.73 Aligned_cols=98 Identities=16% Similarity=0.089 Sum_probs=61.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHH---HHhCCCc---EEEeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEA---LSLLGAD---KFVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~--~~~~~~---~~~~g~~---~~v~~~~~~~~~~~-------~~ 243 (344)
.+.++||+|+ |++|.+.++.+...|++|+++.++. ++.+.+ .++.|.. ...|..+.+.+.+. .+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5678999998 9999999999988999998876543 222222 1233432 22344554433221 26
Q ss_pred CccEEEECCCCc--------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199 244 SLDFIIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 244 ~~dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
++|+++.+.|.. ..++.++..++.+|+++.++..
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 789999887631 1122344445667899988755
No 281
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.30 E-value=0.037 Score=49.37 Aligned_cols=127 Identities=18% Similarity=0.236 Sum_probs=73.5
Q ss_pred cceEEEcCCCCCcccccccchhhhHhH--HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 019199 143 ERYCYKIANDYPLALAAPLLCAGITVY--TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEE 219 (344)
Q Consensus 143 ~~~~~~~P~~~~~~~aa~l~~~~~ta~--~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~ 219 (344)
...++++.+++.+-.. ...+|++ .++.+. .++|.+||-+|+|+ |..+|..+| +|+ +|++++-.+.-.+.
T Consensus 129 ~~~~i~lDPGlAFGTG----~HpTT~lcL~~Le~~--~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~a 200 (300)
T COG2264 129 DELNIELDPGLAFGTG----THPTTSLCLEALEKL--LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEA 200 (300)
T ss_pred CceEEEEccccccCCC----CChhHHHHHHHHHHh--hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHH
Confidence 3567777777755433 2333333 233332 36999999999863 666666666 677 79999988765444
Q ss_pred HHH---hCCCcEEEeCCCHHHHHHh-cCCccEEEECCC-Cc--hhHHHHHHhcccCCEEEEEcCC
Q 019199 220 ALS---LLGADKFVVSSDLEQMKAL-GKSLDFIIDTAS-GD--HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 220 ~~~---~~g~~~~v~~~~~~~~~~~-~~~~dvvid~~g-~~--~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+++ .-+....+........... .+.+|+|+-+.= .+ .......+.++|+|++++.|..
T Consensus 201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl 265 (300)
T COG2264 201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGIL 265 (300)
T ss_pred HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence 422 2222211100101111112 257999986542 21 2355677789999999999855
No 282
>PRK06398 aldose dehydrogenase; Validated
Probab=96.30 E-value=0.078 Score=46.62 Aligned_cols=70 Identities=23% Similarity=0.135 Sum_probs=48.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-------cCCccEEEEC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIIDT 251 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~dvvid~ 251 (344)
.|.++||+|+ +++|.+.+..+...|++|+++++++++.... .....|-.+++.+.+. .+++|+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-----~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDV-----DYFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCce-----EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4678999998 9999999999999999999998876543211 0122355555443332 2579999998
Q ss_pred CCC
Q 019199 252 ASG 254 (344)
Q Consensus 252 ~g~ 254 (344)
.|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 873
No 283
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.28 E-value=0.14 Score=44.93 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=50.3
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~ 244 (344)
.+.+++|+|+ +++|.+.++.+...|++|++++++. +..+.+.++++.. ...|-.+.+.+.+. .++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999985 6999999998888999999988653 3344443445421 22344555443322 267
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++++.|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 284
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.28 E-value=0.046 Score=46.23 Aligned_cols=49 Identities=27% Similarity=0.333 Sum_probs=42.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD 227 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~ 227 (344)
-.|.+++|+|.|.+|..+++.+...|++|++++.+.++.+.+.+.+|+.
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~ 74 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT 74 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE
Confidence 4678999999999999999999999999999999888877775666643
No 285
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.028 Score=48.51 Aligned_cols=75 Identities=20% Similarity=0.240 Sum_probs=50.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE-EEeCCCHHHHHHh-------cCCccE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK-FVVSSDLEQMKAL-------GKSLDF 247 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-~v~~~~~~~~~~~-------~~~~dv 247 (344)
++.++||+|+ |.+|..+++.+...|++|++++++.++.....++ .+... ..|..+.+.+.+. .+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4789999998 9999999999888899999999987654333222 23222 2344444433221 257999
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++.+.+.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998763
No 286
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.04 Score=48.35 Aligned_cols=74 Identities=15% Similarity=0.105 Sum_probs=52.2
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c---EEEeCCCHHHHHHh-------cCCccE
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D---KFVVSSDLEQMKAL-------GKSLDF 247 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~~v~~~~~~~~~~~-------~~~~dv 247 (344)
+.++||+|+ |++|...+..+...|++|++++++.++.+.+.+++.. . ..+|..+.+.+.+. .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 357999987 9999999998888899999999998877665444431 1 12344554443322 256899
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++++.|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9998873
No 287
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.26 E-value=0.15 Score=38.78 Aligned_cols=91 Identities=19% Similarity=0.217 Sum_probs=64.2
Q ss_pred EEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchh---H
Q 019199 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHP---F 258 (344)
Q Consensus 184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~---~ 258 (344)
|+|.|.|.+|+..++.++..+.+|++++.++++.+.+ ++.|...+. |..+++.+.+.. .+++.++-+.+.... .
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEEL-REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-HhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence 5788999999999999999666999999999998888 466644322 345566777664 679998888876542 2
Q ss_pred HHHHHhcccCCEEEEEc
Q 019199 259 DAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 259 ~~~~~~l~~~G~iv~~g 275 (344)
...++.+.+..+++..-
T Consensus 80 ~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 80 ALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHCCCCeEEEEE
Confidence 23444455667776553
No 288
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.26 E-value=0.043 Score=49.17 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=70.6
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+....+..|.....--.|.+|+|+|. +.+|.-.+.++...|+.|++.......+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l--------------------- 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDL--------------------- 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCH---------------------
Confidence 467776666666665554468999999994 9999999999999999999985322211
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+..+..|+++-++|.+..+...+ ++++..++++|..
T Consensus 196 ~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin 232 (296)
T PRK14188 196 PAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGIN 232 (296)
T ss_pred HHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence 122345899999999887555544 8999999999865
No 289
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.25 E-value=0.047 Score=49.59 Aligned_cols=90 Identities=16% Similarity=0.236 Sum_probs=63.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~ 258 (344)
-.|.+|.|+|.|.+|...++.++.+|.+|++.++..++.. +..... ..+.+.++-.+.|+++.+.......
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T 204 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPET 204 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHH
Confidence 3678999999999999999999999999999987543221 222221 1223444456789999888743322
Q ss_pred -----HHHHHhcccCCEEEEEcCC
Q 019199 259 -----DAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 259 -----~~~~~~l~~~G~iv~~g~~ 277 (344)
...++.++++..+|.+|-.
T Consensus 205 ~~li~~~~l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 205 VGIINQQLLEQLPDGAYLLNLARG 228 (312)
T ss_pred HHHhHHHHHhcCCCCcEEEECCCc
Confidence 3467789999998888743
No 290
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.25 E-value=0.098 Score=46.04 Aligned_cols=98 Identities=17% Similarity=0.101 Sum_probs=60.9
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCch------hHHHHHHhCCC--cEEEeCCCHHHHHHh-------
Q 019199 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS------KKEEALSLLGA--DKFVVSSDLEQMKAL------- 241 (344)
Q Consensus 180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~------~~~~~~~~~g~--~~~v~~~~~~~~~~~------- 241 (344)
.|.+++|+|+ +++|.+.+..+...|++|+++.++.+ ..+.+.++.+. ...+|-.+.+.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 4678999986 48999999988889999988754322 23333222221 112355555443322
Q ss_pred cCCccEEEECCCCch-----------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199 242 GKSLDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 242 ~~~~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+++|+++++.|... ..+.++..++.+|+|+.++..
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~ 149 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL 149 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 257999999887320 113345556677999988654
No 291
>PLN02928 oxidoreductase family protein
Probab=96.25 E-value=0.044 Score=50.54 Aligned_cols=115 Identities=18% Similarity=0.222 Sum_probs=72.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-----CcEEEeC-CCHHHHHHhcCCccEEEECC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-----ADKFVVS-SDLEQMKALGKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-----~~~~v~~-~~~~~~~~~~~~~dvvid~~ 252 (344)
-.|.++.|+|.|.+|..+++.++.+|++|++.+++..+.... .++ ....++. .....+.++-...|+|+.+.
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPED--GLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhh--hhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 357899999999999999999999999999998764322111 110 0011100 01123344446699999887
Q ss_pred CCch-----hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199 253 SGDH-----PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 253 g~~~-----~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (344)
.... .-...++.|+++..+|.++-..-+ +-+.+++.+.+|++.
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lV-------------de~AL~~AL~~g~i~ 282 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLL-------------DYDAVLAALESGHLG 282 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCCcccc-------------CHHHHHHHHHcCCee
Confidence 6322 124677889999999888633111 234566667777663
No 292
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.25 E-value=0.012 Score=49.84 Aligned_cols=92 Identities=11% Similarity=0.032 Sum_probs=59.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
-.|.+|||+|+|.+|...+..+...|++|+++..... ++..+. ..+. ..+...... ...-.++|+||-+++.+.
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~~~~--~~~l~~adlViaaT~d~e- 82 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQKEFE--PSDIVDAFLVIAATNDPR- 82 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEecCCC--hhhcCCceEEEEcCCCHH-
Confidence 3578999999999999999888889999999875432 223321 2221 112221111 111257999999999887
Q ss_pred HHHHHHhcccCCEEEEEc
Q 019199 258 FDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 258 ~~~~~~~l~~~G~iv~~g 275 (344)
++..+...+..+.++...
T Consensus 83 lN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 83 VNEQVKEDLPENALFNVI 100 (202)
T ss_pred HHHHHHHHHHhCCcEEEC
Confidence 777776666556666554
No 293
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.025 Score=49.62 Aligned_cols=75 Identities=21% Similarity=0.254 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|...+..+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+... .+++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 5678999998 99999999999899999999999887665553333 321 23344454433321 2578
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999998864
No 294
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.25 E-value=0.069 Score=46.12 Aligned_cols=102 Identities=12% Similarity=0.116 Sum_probs=61.4
Q ss_pred HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe---EEEEeCC----chhH-------HHHHHhCCCcEEEeCCC
Q 019199 169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN---VTVLSTS----TSKK-------EEALSLLGADKFVVSSD 234 (344)
Q Consensus 169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~---V~~~~~~----~~~~-------~~~~~~~g~~~~v~~~~ 234 (344)
..+++..+.--.+.+++|+|+|+.|.+++..+...|++ ++++++. .++. ..+.+.++... .+ .+
T Consensus 13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-~~ 90 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-GT 90 (226)
T ss_pred HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc-CC
Confidence 33454444324678999999999999999988888985 8899988 4432 22223443211 11 11
Q ss_pred HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEc
Q 019199 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g 275 (344)
+.+...++|++|++++....-...++.+.+...++.+.
T Consensus 91 ---l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 91 ---LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred ---HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 21222458999998873321245666666666555443
No 295
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.24 E-value=0.037 Score=50.24 Aligned_cols=90 Identities=21% Similarity=0.243 Sum_probs=61.1
Q ss_pred CEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh--
Q 019199 182 KSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP-- 257 (344)
Q Consensus 182 ~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~-- 257 (344)
.+|.|+|+|.+|.+.+..++..|. +|++.++++++.+.+ ++.|....+... . .+...++|+||.++.....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~~-~---~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTTS-A---AEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecCC-H---HHHhcCCCEEEECCCHHHHHH
Confidence 579999999999999998888884 899999998888777 567742211111 1 1223568999999886431
Q ss_pred -HHHHHHhcccCCEEEEEcC
Q 019199 258 -FDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 258 -~~~~~~~l~~~G~iv~~g~ 276 (344)
+......++++..++++|.
T Consensus 82 v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHhhCCCCCEEEeCcc
Confidence 2333345566777776664
No 296
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.03 Score=49.03 Aligned_cols=74 Identities=23% Similarity=0.244 Sum_probs=51.7
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc-EE--EeCCCHHHHHHh-------cCCcc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~~-------~~~~d 246 (344)
|.++||.|+ |++|.+.++.+...|++|++++++.++.+.+.+++ +.. .. .|-.+++.+.+. .+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468899987 99999999999999999999999887665543322 322 12 244455444332 25789
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
+++++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 297
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.23 E-value=0.056 Score=43.84 Aligned_cols=74 Identities=27% Similarity=0.266 Sum_probs=47.4
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCC--chhHHHHH---HhCCCcEE---EeCCCHHHHHHh-------cCC
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTS--TSKKEEAL---SLLGADKF---VVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~--~~~~~~~~---~~~g~~~~---v~~~~~~~~~~~-------~~~ 244 (344)
+++||+|+ +++|.+.++.+-..|+ +|+++.++ .++.+.+. +..+.... .|..+.+.+++. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36899997 9999998888877777 77778877 34444332 23343221 234444443332 368
Q ss_pred ccEEEECCCCc
Q 019199 245 LDFIIDTASGD 255 (344)
Q Consensus 245 ~dvvid~~g~~ 255 (344)
+|++|.+.|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999988853
No 298
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.22 E-value=0.029 Score=49.58 Aligned_cols=76 Identities=20% Similarity=0.219 Sum_probs=52.5
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCC-C-cEEEeCCCHHHHHH-------hcCCc
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLG-A-DKFVVSSDLEQMKA-------LGKSL 245 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g-~-~~~v~~~~~~~~~~-------~~~~~ 245 (344)
-.|+.|||+|+ +++|.+.++-...+|+++.+.+.+.+-..+-.+ +.| + ..+.|-++.+.+.+ .-+.+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 46899999988 799988777777788999888888764433322 334 2 34556566544332 23789
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++|++|-
T Consensus 116 ~ILVNNAGI 124 (300)
T KOG1201|consen 116 DILVNNAGI 124 (300)
T ss_pred eEEEecccc
Confidence 999998884
No 299
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.22 E-value=0.023 Score=51.80 Aligned_cols=74 Identities=26% Similarity=0.352 Sum_probs=52.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC---Cc-E--EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---AD-K--FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~-~--~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|..+++.+...|++|++++++.++.+.+.+++. .. . ..|-.+.+.+.+. .+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4678999987 999999999888889999999998887766544442 11 1 2344554433322 2469
Q ss_pred cEEEECCC
Q 019199 246 DFIIDTAS 253 (344)
Q Consensus 246 dvvid~~g 253 (344)
|++|++.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999887
No 300
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.03 Score=49.03 Aligned_cols=75 Identities=24% Similarity=0.229 Sum_probs=52.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.++ .+.+. ..|..+.+.+.+. .+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999998 9999999998888999999999988876655333 23222 1244454433322 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999998874
No 301
>PRK08317 hypothetical protein; Provisional
Probab=96.21 E-value=0.042 Score=47.46 Aligned_cols=102 Identities=20% Similarity=0.221 Sum_probs=65.9
Q ss_pred hccCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHh---CCCcEEEeCCCHHHHHHhcCCccEE
Q 019199 174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGADKFVVSSDLEQMKALGKSLDFI 248 (344)
Q Consensus 174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~dvv 248 (344)
....+.++++||.+|+|. |..+..+++..+ .++++++.+++.++.+++. .+....+...+..........+|+|
T Consensus 13 ~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 91 (241)
T PRK08317 13 ELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAV 91 (241)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEE
Confidence 334458899999999975 888888888773 5899999998887777443 1111111111111111112568888
Q ss_pred EECC-----CC-chhHHHHHHhcccCCEEEEEcC
Q 019199 249 IDTA-----SG-DHPFDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 249 id~~-----g~-~~~~~~~~~~l~~~G~iv~~g~ 276 (344)
+... .. ...+..+.+.|+++|+++....
T Consensus 92 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 92 RSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred EEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 7532 11 2357889999999999987753
No 302
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.20 E-value=0.16 Score=42.76 Aligned_cols=98 Identities=20% Similarity=0.212 Sum_probs=60.7
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCccEE-E
Q 019199 177 MNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDFI-I 249 (344)
Q Consensus 177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~dvv-i 249 (344)
.++++++||-+|+|. |..++.+++.. +.+|+.++.+++..+.+.+ +++.. .++..+..+.+......+|.+ +
T Consensus 37 ~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~ 115 (196)
T PRK07402 37 RLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCI 115 (196)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEE
Confidence 447889998888753 55566666654 4699999999887766643 34532 233333223333333334444 4
Q ss_pred ECCCC-chhHHHHHHhcccCCEEEEEc
Q 019199 250 DTASG-DHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 250 d~~g~-~~~~~~~~~~l~~~G~iv~~g 275 (344)
+.... ...++.+.+.|+++|+++...
T Consensus 116 ~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 116 EGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred ECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 43222 245788889999999998774
No 303
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.18 E-value=0.093 Score=44.57 Aligned_cols=92 Identities=13% Similarity=0.142 Sum_probs=60.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~ 258 (344)
.|.+|||+|+|.+|..-++.+...|++|++++.... .+..+ .+.|.-..+. .+.. .....++++||-+++.+..-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l-~~~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLL-AEQGGITWLA-RCFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHH-HHcCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence 467999999999999999999999999999886643 34444 2334222222 2111 11125799999999987634
Q ss_pred HHHHHhcccCCEEEEEc
Q 019199 259 DAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 259 ~~~~~~l~~~G~iv~~g 275 (344)
.......+..|..+...
T Consensus 84 ~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 84 RRVAHAARARGVPVNVV 100 (205)
T ss_pred HHHHHHHHHcCCEEEEC
Confidence 44555556667776543
No 304
>PLN02253 xanthoxin dehydrogenase
Probab=96.17 E-value=0.039 Score=49.09 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=52.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c---EEEeCCCHHHHHHh-------cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D---KFVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~~v~~~~~~~~~~~-------~~~~d 246 (344)
.+.++||+|+ |++|.+.++.+...|++|++++++++..+.+.++++. . ...|-.+.+.+.+. .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999988888899999999877665554444431 1 12355555444332 25799
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
+++++.|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99998874
No 305
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.17 E-value=0.079 Score=47.19 Aligned_cols=110 Identities=22% Similarity=0.161 Sum_probs=72.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-cEEE-------eCCCHHHHH----Hh---c
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKFV-------VSSDLEQMK----AL---G 242 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~v-------~~~~~~~~~----~~---~ 242 (344)
++...++|+|. .++|++....++..|+.|+++.++.+++..+.++++. ..+. |-.+.+... ++ .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 45578899875 8999999999999999999999999999988777763 2111 112222222 22 2
Q ss_pred CCccEEEECCCCc----------h---------------hHHHHHHhcc---cCCEEEEEcCC-CccccCCceee
Q 019199 243 KSLDFIIDTASGD----------H---------------PFDAYMSLLK---VAGVYVLVGFP-SKVKFSPASLN 288 (344)
Q Consensus 243 ~~~dvvid~~g~~----------~---------------~~~~~~~~l~---~~G~iv~~g~~-~~~~~~~~~~~ 288 (344)
+-+|.+|.|.|.. + ..+.++..++ +.|+|+.++.. ....+..+...
T Consensus 111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaY 185 (331)
T KOG1210|consen 111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAY 185 (331)
T ss_pred CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccc
Confidence 5689999999853 1 1223333332 34699999876 55555555444
No 306
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.039 Score=47.37 Aligned_cols=72 Identities=19% Similarity=0.173 Sum_probs=50.7
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHh----c-CCccEEEECCC
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKAL----G-KSLDFIIDTAS 253 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~----~-~~~dvvid~~g 253 (344)
.+++|+|+ |++|.+.+..+...|++|+++++++++.+.+ ++++.. ..+|-.+.+.++++ . +++|++|.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899997 9999999988888899999999998876655 344321 22344555444332 2 46999998775
Q ss_pred C
Q 019199 254 G 254 (344)
Q Consensus 254 ~ 254 (344)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 3
No 307
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.16 E-value=0.078 Score=52.77 Aligned_cols=95 Identities=16% Similarity=0.137 Sum_probs=72.9
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchhH
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHPF 258 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~~ 258 (344)
.++|+|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...++ |..+++.+++.+ .++|.++-+.+++..-
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n 478 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLM-RKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDT 478 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHH
Confidence 3578999999999999999999999999999999999888 577865433 456677777765 7899999998876522
Q ss_pred ---HHHHHhcccCCEEEEEcC
Q 019199 259 ---DAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 259 ---~~~~~~l~~~G~iv~~g~ 276 (344)
....+...|..+++....
T Consensus 479 ~~i~~~~r~~~p~~~IiaRa~ 499 (601)
T PRK03659 479 MKIVELCQQHFPHLHILARAR 499 (601)
T ss_pred HHHHHHHHHHCCCCeEEEEeC
Confidence 233455667778876643
No 308
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.15 E-value=0.091 Score=46.03 Aligned_cols=99 Identities=15% Similarity=0.057 Sum_probs=62.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-CCcE-EEeCCC-HHHHHHhc-CCccEEEECCC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-GADK-FVVSSD-LEQMKALG-KSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~~-~v~~~~-~~~~~~~~-~~~dvvid~~g 253 (344)
..+.++||+|+ |.+|..++..+...|.+|+++.++.++........ +... ..|..+ ...+.+.. .++|++|.+.|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g 94 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG 94 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence 34578999998 99999999888888999999998877654332111 2222 124443 23333333 57999998876
Q ss_pred Cch-------------hHHHHHHhccc--CCEEEEEcCC
Q 019199 254 GDH-------------PFDAYMSLLKV--AGVYVLVGFP 277 (344)
Q Consensus 254 ~~~-------------~~~~~~~~l~~--~G~iv~~g~~ 277 (344)
... ....+++.++. .++++.++..
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 421 13445555543 3688887654
No 309
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.033 Score=47.87 Aligned_cols=71 Identities=21% Similarity=0.210 Sum_probs=51.7
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh----cCCccEEEECCC
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL----GKSLDFIIDTAS 253 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~----~~~~dvvid~~g 253 (344)
+++|+|+ |++|.+.++.+...|++|++++++.++.+.+.++.+... ..|..+.+.+.+. .+++|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4889987 999999999998899999999999888776645555432 2355555544332 246899998765
No 310
>PRK08589 short chain dehydrogenase; Validated
Probab=96.15 E-value=0.038 Score=49.04 Aligned_cols=74 Identities=20% Similarity=0.220 Sum_probs=50.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ +++|.+.++.+...|++|++++++ ++.+...+++ +.. ...|-.+.+.+.+. .+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 4678999998 999999998888899999999988 5544332332 321 23344554433321 2578
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999998874
No 311
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.14 E-value=0.0093 Score=44.64 Aligned_cols=88 Identities=19% Similarity=0.212 Sum_probs=58.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD 259 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~ 259 (344)
.|.+|||+|+|.+|..-++.+...|++|++++... ... + +--... .+.. .+...++++|+-+.+.+..-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~-~--~~i~~~-~~~~---~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFS-E--GLIQLI-RREF---EEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHH-H--TSCEEE-ESS----GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhh-h--hHHHHH-hhhH---HHHHhhheEEEecCCCHHHHH
Confidence 57889999999999999999999999999999876 222 1 211122 2221 122467999999999887445
Q ss_pred HHHHhcccCCEEEEEcCC
Q 019199 260 AYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 260 ~~~~~l~~~G~iv~~g~~ 277 (344)
......+..|.++.....
T Consensus 76 ~i~~~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 76 AIYADARARGILVNVVDD 93 (103)
T ss_dssp HHHHHHHHTTSEEEETT-
T ss_pred HHHHHHhhCCEEEEECCC
Confidence 555555668888877543
No 312
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.13 E-value=0.047 Score=48.37 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=64.9
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-c-EEEeCCCHHHHHHhcCCccEEEEC-
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-D-KFVVSSDLEQMKALGKSLDFIIDT- 251 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~-~~v~~~~~~~~~~~~~~~dvvid~- 251 (344)
...+.++.+||-+|+|. |..+..+++..+++|+.++.+++..+.+.+.... . ..+...+.....-..+.||+|+..
T Consensus 47 ~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~s~~ 125 (263)
T PTZ00098 47 DIELNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIYSRD 125 (263)
T ss_pred hCCCCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEEEhh
Confidence 33458999999999863 5566777777788999999998887777544432 1 111111111100012469999852
Q ss_pred -C---C---CchhHHHHHHhcccCCEEEEEcCC
Q 019199 252 -A---S---GDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 252 -~---g---~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
. + -...++.+.+.|+|+|+++.....
T Consensus 126 ~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~~ 158 (263)
T PTZ00098 126 AILHLSYADKKKLFEKCYKWLKPNGILLITDYC 158 (263)
T ss_pred hHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1 1 123467788999999999987643
No 313
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.11 E-value=0.028 Score=51.40 Aligned_cols=93 Identities=16% Similarity=0.259 Sum_probs=63.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHH-HCCC-eEEEEeCCchhHHHHHHhC----CCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGK-AFGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~-~~g~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~dvvid~~ 252 (344)
+...+++|+|+|..+.+.+..+. ..+. +|.+..++.++.+.+.+++ |.. +....+. .+.-.++|+|+.++
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~~---~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATDP---RAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCCH---HHHhccCCEEEEec
Confidence 45678999999999988877776 4676 8999999998877665544 432 2222222 22235799999998
Q ss_pred CCchh-HHHHHHhcccCCEEEEEcCC
Q 019199 253 SGDHP-FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 253 g~~~~-~~~~~~~l~~~G~iv~~g~~ 277 (344)
+...- +. .+.++++-.+..+|..
T Consensus 203 ~s~~p~i~--~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 203 PSETPILH--AEWLEPGQHVTAMGSD 226 (326)
T ss_pred CCCCcEec--HHHcCCCcEEEeeCCC
Confidence 76431 22 2457888888888854
No 314
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.09 E-value=0.03 Score=50.70 Aligned_cols=93 Identities=17% Similarity=0.152 Sum_probs=65.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTASG 254 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~~g~ 254 (344)
....+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++... .+. ..+ +.+.-.++|+|+.++.+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~~---~~~av~~aDiVitaT~s 198 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PLD---GEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-ECC---HHHHhhcCCEEEEccCC
Confidence 566789999999999998888764 576 7999999988877766666421 111 122 22233579999998886
Q ss_pred chhHHHHHHhcccCCEEEEEcCC
Q 019199 255 DHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 255 ~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
..-+-.. .++|+-.+..+|..
T Consensus 199 ~~Pl~~~--~~~~g~hi~~iGs~ 219 (304)
T PRK07340 199 RTPVYPE--AARAGRLVVAVGAF 219 (304)
T ss_pred CCceeCc--cCCCCCEEEecCCC
Confidence 5433233 37999999999865
No 315
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.09 E-value=0.072 Score=47.16 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=71.2
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+....+..+.....--.|.+|+|+|- ..+|..+..++...|++|++..+....+.
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~-------------------- 190 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLK-------------------- 190 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHH--------------------
Confidence 467766666666666655468999999997 59999999999999999999886543332
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++.++|.+..+.. +.++++..++++|..
T Consensus 191 -~~~~~ADIvI~Avgk~~lv~~--~~vk~GavVIDVgi~ 226 (279)
T PRK14178 191 -AELRQADILVSAAGKAGFITP--DMVKPGATVIDVGIN 226 (279)
T ss_pred -HHHhhCCEEEECCCcccccCH--HHcCCCcEEEEeecc
Confidence 223558999999997654443 347999999999865
No 316
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.09 E-value=0.048 Score=46.22 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=30.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~ 213 (344)
.+.+|+|+|+|++|..+++.+...|. ++++++..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999998 88888866
No 317
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.048 Score=47.68 Aligned_cols=74 Identities=27% Similarity=0.297 Sum_probs=51.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-c---EEEeCCCHHHHHHh-------cCCccE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-D---KFVVSSDLEQMKAL-------GKSLDF 247 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~---~~v~~~~~~~~~~~-------~~~~dv 247 (344)
.+.++||+|+ |++|...++.+...|++|++++++.+..... ++... . ...|..+.+.+.+. .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVA-AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999998 9999999998888999999999887654433 23321 1 12344444433322 257899
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9998874
No 318
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.12 Score=45.02 Aligned_cols=98 Identities=20% Similarity=0.197 Sum_probs=59.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHh---CCCcE---EEeCCCHHHHH----Hh------
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEALSL---LGADK---FVVSSDLEQMK----AL------ 241 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~-~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~----~~------ 241 (344)
.+.++||+|+ +++|.++++.+...|++|++.. ++.++.+...++ .+... ..|..+.+.+. ++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4678999997 9999999999999999998865 444444333222 23221 12333322111 11
Q ss_pred --c-CCccEEEECCCCch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199 242 --G-KSLDFIIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 242 --~-~~~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+ +++|+++++.|... ..+.++..++..|+++.++..
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~ 146 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 146 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCc
Confidence 1 37999999887310 112345556667999998765
No 319
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.041 Score=48.36 Aligned_cols=75 Identities=23% Similarity=0.315 Sum_probs=52.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCc---EEEeCCCHHHHHHh---cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD---KFVVSSDLEQMKAL---GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~~v~~~~~~~~~~~---~~~~dvv 248 (344)
.+.++||.|+ +++|...++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+.+.+. .+++|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4688999998 89999999988889999999999887665543322 322 12344454444332 2679999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
+++.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 998874
No 320
>PRK01581 speE spermidine synthase; Validated
Probab=96.06 E-value=0.4 Score=44.18 Aligned_cols=137 Identities=15% Similarity=0.092 Sum_probs=77.0
Q ss_pred CcceeEEEEecc-eEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEE
Q 019199 133 GGYSSYIVVHER-YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVL 210 (344)
Q Consensus 133 g~~~~~~~~~~~-~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~ 210 (344)
-.||+..++... ..+-+...+-..+.--....-+-++-++.. .....+|||+|+| .|.++..+++..+. +|+++
T Consensus 105 S~yQ~I~I~et~~~~L~LDG~~Q~se~DE~iYHE~Lvhp~m~~---h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~V 180 (374)
T PRK01581 105 SNYQNINLLQVSDIRLYLDKQLQFSSVDEQIYHEALVHPIMSK---VIDPKRVLILGGG-DGLALREVLKYETVLHVDLV 180 (374)
T ss_pred CCCceEEEEEcCCEEEEECCeeccccccHHHHHHHHHHHHHHh---CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEE
Confidence 458887777643 333443333222222111111111212211 1344689999965 46677777776554 89999
Q ss_pred eCCchhHHHHHHhCC------------C-cEEEeCCCHHHHHHhcCCccEEEECCCCc-----------hhHHHHHHhcc
Q 019199 211 STSTSKKEEALSLLG------------A-DKFVVSSDLEQMKALGKSLDFIIDTASGD-----------HPFDAYMSLLK 266 (344)
Q Consensus 211 ~~~~~~~~~~~~~~g------------~-~~~v~~~~~~~~~~~~~~~dvvid~~g~~-----------~~~~~~~~~l~ 266 (344)
+-+++-.+.++ ++. . -.++..+..+.+.+..+.+|++|--...+ ..++.+.+.|+
T Consensus 181 EIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~Lk 259 (374)
T PRK01581 181 DLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLT 259 (374)
T ss_pred eCCHHHHHHHH-hccccchhccccCCCCceEEEECcHHHHHHhcCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcC
Confidence 99988888774 321 0 11222222344544456799987443222 23678888999
Q ss_pred cCCEEEEE
Q 019199 267 VAGVYVLV 274 (344)
Q Consensus 267 ~~G~iv~~ 274 (344)
|+|.++.-
T Consensus 260 PgGV~V~Q 267 (374)
T PRK01581 260 EDGAFVCQ 267 (374)
T ss_pred CCcEEEEe
Confidence 99998765
No 321
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.043 Score=47.39 Aligned_cols=74 Identities=11% Similarity=0.109 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cC-C
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GK-S 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~-~ 244 (344)
.|.+++|.|+ +++|.+.+..+...|++|+++.++.++++.+.+ +.+.+. ..|..+.+.+.+. -+ +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 899999998888899999999998887655433 334321 2344454443321 14 7
Q ss_pred ccEEEECCC
Q 019199 245 LDFIIDTAS 253 (344)
Q Consensus 245 ~dvvid~~g 253 (344)
+|+++++.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999886
No 322
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.05 E-value=0.059 Score=44.22 Aligned_cols=92 Identities=23% Similarity=0.260 Sum_probs=63.5
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE--eCCCHHHHHHhcCCccEEEECCCCc--h-
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--VSSDLEQMKALGKSLDFIIDTASGD--H- 256 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v--~~~~~~~~~~~~~~~dvvid~~g~~--~- 256 (344)
++.|+|+ |-+|...++-|+..|-.|+++++++++.... + +. .++ |--+.+.+.+.-.++|+||++.+.. .
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~--~~-~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-Q--GV-TILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-c--cc-eeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 4778888 9999999999999999999999999887543 1 21 111 1123334444557899999998865 1
Q ss_pred ------hHHHHHHhcccC--CEEEEEcCCC
Q 019199 257 ------PFDAYMSLLKVA--GVYVLVGFPS 278 (344)
Q Consensus 257 ------~~~~~~~~l~~~--G~iv~~g~~~ 278 (344)
..+.++..|+.- .|++.+|.-+
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 133466667663 5788787553
No 323
>PRK07069 short chain dehydrogenase; Validated
Probab=96.04 E-value=0.16 Score=44.12 Aligned_cols=71 Identities=20% Similarity=0.225 Sum_probs=48.0
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHhC----CCc----EEEeCCCHHHHHHh-------cCCcc
Q 019199 184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS-TSKKEEALSLL----GAD----KFVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 184 vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~-~~~~~~~~~~~----g~~----~~v~~~~~~~~~~~-------~~~~d 246 (344)
++|+|+ |++|...++.+...|++|++++++ .++.+.+.+++ +.. ...|..+.+.+.+. .+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 788887 999999998888889999999987 55554443332 211 12355555443322 25789
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (251)
T PRK07069 82 VLVNNAGV 89 (251)
T ss_pred EEEECCCc
Confidence 99998873
No 324
>PRK08017 oxidoreductase; Provisional
Probab=96.03 E-value=0.059 Score=47.12 Aligned_cols=72 Identities=21% Similarity=0.176 Sum_probs=52.6
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHH----h----cCCccEEEEC
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKA----L----GKSLDFIIDT 251 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~----~----~~~~dvvid~ 251 (344)
+++||+|+ |++|.++++.+...|++|++++++.++.+.+ +..+.+. ..|..+.+.+.. . .+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 47999998 9999999999999999999999998887776 4566543 234445433222 1 2567888888
Q ss_pred CCC
Q 019199 252 ASG 254 (344)
Q Consensus 252 ~g~ 254 (344)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 763
No 325
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.03 E-value=0.12 Score=43.27 Aligned_cols=96 Identities=20% Similarity=0.241 Sum_probs=58.2
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEE-EeCCCHHHH---HH-h-cCCccE
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQM---KA-L-GKSLDF 247 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~---~~-~-~~~~dv 247 (344)
...+++|++||.+|+|+-+.+.....+..+ .+|++++.++.+ ...+...+ .|..+.... .+ . .+++|+
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~ 101 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV 101 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence 445589999999998765544333333333 489999988754 11233321 233332222 22 2 257999
Q ss_pred EEEC-C----CC------------chhHHHHHHhcccCCEEEEEc
Q 019199 248 IIDT-A----SG------------DHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 248 vid~-~----g~------------~~~~~~~~~~l~~~G~iv~~g 275 (344)
|+.. . |. ...+..+.+.|+|+|+++...
T Consensus 102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9952 2 21 235778899999999998864
No 326
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.02 E-value=0.042 Score=48.30 Aligned_cols=72 Identities=24% Similarity=0.195 Sum_probs=50.4
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc--EEEeCCCHHHHHHh-------cCCccEEE
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD--KFVVSSDLEQMKAL-------GKSLDFII 249 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~-------~~~~dvvi 249 (344)
++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+.+. .+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5899987 99999999988889999999999887765543332 311 12344454433322 25799999
Q ss_pred ECCCC
Q 019199 250 DTASG 254 (344)
Q Consensus 250 d~~g~ 254 (344)
++.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 98874
No 327
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.99 E-value=0.082 Score=52.23 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=67.8
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchh--
Q 019199 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHP-- 257 (344)
Q Consensus 182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~-- 257 (344)
++++|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...+. |..+++.+++.. +++|.++-++++...
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~ 496 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-RERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAG 496 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHH
Confidence 678999999999999999999999999999999999888 567765444 345566666654 789988877765432
Q ss_pred -HHHHHHhcccCCEEEEE
Q 019199 258 -FDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 258 -~~~~~~~l~~~G~iv~~ 274 (344)
.-...+...+..+++..
T Consensus 497 ~iv~~~~~~~~~~~iiar 514 (558)
T PRK10669 497 EIVASAREKRPDIEIIAR 514 (558)
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 22233445556666655
No 328
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.98 E-value=0.056 Score=46.72 Aligned_cols=74 Identities=23% Similarity=0.108 Sum_probs=50.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHH----h---cCCccEEEEC
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKA----L---GKSLDFIIDT 251 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~----~---~~~~dvvid~ 251 (344)
+.++||.|+ +++|.+.++.+...|++|+++++++++.....+..+... ..|..+.+.+.+ . .+++|+++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 457999998 999999999988899999999988765433324455321 234444433322 1 2569999998
Q ss_pred CCC
Q 019199 252 ASG 254 (344)
Q Consensus 252 ~g~ 254 (344)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 329
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.98 E-value=0.08 Score=47.04 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=72.2
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
..||+....+..+.....--.|.+++|+|. ..+|.-+..++...|+.|++.......+.
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~-------------------- 202 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLK-------------------- 202 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHH--------------------
Confidence 467766666666766655468999999998 57999999999999999999885433222
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++.++|.+..+ --+.++++..++++|..
T Consensus 203 -~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin 238 (287)
T PRK14176 203 -KYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT 238 (287)
T ss_pred -HHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence 2235689999999988744 34589999999999874
No 330
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.97 E-value=0.07 Score=47.17 Aligned_cols=100 Identities=16% Similarity=0.080 Sum_probs=64.0
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhCC------C-cEEEeCCCHHHHHHhcCCccE
Q 019199 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLLG------A-DKFVVSSDLEQMKALGKSLDF 247 (344)
Q Consensus 177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~g------~-~~~v~~~~~~~~~~~~~~~dv 247 (344)
.++++++||-+|+|+ |..+..+++..+ .+|++++.+++.++.+.++.. . ..-+...+...+.-..+.+|+
T Consensus 70 ~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~sfD~ 148 (261)
T PLN02233 70 GAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDCYFDA 148 (261)
T ss_pred CCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCCCEeE
Confidence 347899999999864 556777777765 489999999998887744322 1 111111111111111245899
Q ss_pred EEECCCC------chhHHHHHHhcccCCEEEEEcCC
Q 019199 248 IIDTASG------DHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 248 vid~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
|+-..+- ...++++.+.|+|+|+++.+.+.
T Consensus 149 V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 149 ITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred EEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 8754321 23478899999999999888655
No 331
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.97 E-value=0.053 Score=47.56 Aligned_cols=75 Identities=16% Similarity=0.201 Sum_probs=53.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv 248 (344)
.+.++||+|+ |++|...++.+...|++|++++++.++.+.+.++.+... ..|-.+.+.+.+. .+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 999999999998899999999999887766644544221 2233444333221 2578999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
+.+.+.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998763
No 332
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.96 E-value=0.027 Score=54.32 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=54.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHHhCCCcEEEeCCCH-H
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST---------------------SKKEEALSLLGADKFVVSSDL-E 236 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~---------------------~~~~~~~~~~g~~~~v~~~~~-~ 236 (344)
..+++|+|+|+|..|+.++..++..|.+|++++..+ .+.+.+ +++|.+..++..-. +
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~ 217 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIF-TAMGIEFHLNCEVGRD 217 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHH-HHCCCEEECCCEeCCc
Confidence 468899999999999999999999999999888654 133444 67887654443211 1
Q ss_pred -HHHHhcCCccEEEECCCCch
Q 019199 237 -QMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 237 -~~~~~~~~~dvvid~~g~~~ 256 (344)
.......++|.+|.++|...
T Consensus 218 ~~~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 ISLDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred cCHHHHHhcCCEEEEEeCCCC
Confidence 11222346999999999753
No 333
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.034 Score=50.32 Aligned_cols=75 Identities=27% Similarity=0.321 Sum_probs=51.5
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCc---EEEeCCCHHHHHHh-------c
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD---KFVVSSDLEQMKAL-------G 242 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~~v~~~~~~~~~~~-------~ 242 (344)
..|.++||+|+ |++|..+++.+...|++|++++++.++.+.+.+++ +.. ..+|-.+.+.+.+. .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 36788999998 99999999988888999999999877654432222 111 12344454433322 2
Q ss_pred CCccEEEECCC
Q 019199 243 KSLDFIIDTAS 253 (344)
Q Consensus 243 ~~~dvvid~~g 253 (344)
+++|++|.+.|
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 57899999887
No 334
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.96 E-value=0.03 Score=45.35 Aligned_cols=89 Identities=18% Similarity=0.040 Sum_probs=58.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF 258 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~ 258 (344)
-.|.+|+|+|+|.+|..-++.+...|++|++++ ++..+.+ ++++... +..+..+ ..-..++|+|+-+++... .
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l-~~l~~i~-~~~~~~~--~~dl~~a~lViaaT~d~e-~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEM-KELPYIT-WKQKTFS--NDDIKDAHLIYAATNQHA-V 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHH-HhccCcE-EEecccC--hhcCCCceEEEECCCCHH-H
Confidence 467889999999999998988888999999884 4434444 3444222 2222111 111257999999998887 7
Q ss_pred HHHHHhcccCCEEEEE
Q 019199 259 DAYMSLLKVAGVYVLV 274 (344)
Q Consensus 259 ~~~~~~l~~~G~iv~~ 274 (344)
+..+...+..+.++..
T Consensus 84 N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 84 NMMVKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHHHHCCcEEE
Confidence 7777766555444443
No 335
>PRK08643 acetoin reductase; Validated
Probab=95.94 E-value=0.049 Score=47.68 Aligned_cols=74 Identities=23% Similarity=0.225 Sum_probs=51.3
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCcc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~d 246 (344)
+.++||+|+ |++|...++.+...|++|++++++.++.+.+.+++ +... ..|..+++.+.+. .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 567899987 99999999999889999999998877655443332 3221 2244454433221 25799
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99998864
No 336
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.067 Score=47.48 Aligned_cols=73 Identities=16% Similarity=0.150 Sum_probs=52.4
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEEEE
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFIID 250 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvvid 250 (344)
.++||+|+ |.+|...++.+...|++|+++.++.++.+.+.+..+... ..|..+.+.+.+. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46899987 999999999888899999999999887766644444321 2344554433321 257899999
Q ss_pred CCCC
Q 019199 251 TASG 254 (344)
Q Consensus 251 ~~g~ 254 (344)
+.|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 8874
No 337
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.94 E-value=0.057 Score=47.40 Aligned_cols=76 Identities=25% Similarity=0.268 Sum_probs=53.4
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~ 244 (344)
-.+.++||+|+ |++|...++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.+.+. .++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35688999997 99999999999889999999999887765553322 222 22345555444221 257
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++.+.|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 338
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.052 Score=47.44 Aligned_cols=75 Identities=25% Similarity=0.311 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|.+.++.+...|++|+.++++.++.+.+.++ .+.. ...|..+.+.+.+. .+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999997 9999999999998999999999987766554333 2321 12244444433221 2568
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.+.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999988873
No 339
>PRK14967 putative methyltransferase; Provisional
Probab=95.93 E-value=0.17 Score=43.54 Aligned_cols=126 Identities=23% Similarity=0.228 Sum_probs=75.9
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHH---hCCCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALS---LLGADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g 253 (344)
++++++||-.|+|. |..++.+++. ++ +|+.++.+++..+.+++ ..+....+...+.... ...+.+|+|+...+
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~Vi~npP 110 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDVVVSNPP 110 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeEEEECCC
Confidence 47889999999986 8888888875 56 99999999887665432 2343222222222111 11357999987532
Q ss_pred Cc---------------------------hhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCC
Q 019199 254 GD---------------------------HPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHK 306 (344)
Q Consensus 254 ~~---------------------------~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 306 (344)
.. ..+..+.+.|+++|+++.+-... ..+.++++++.+..
T Consensus 111 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~--------------~~~~~~~~~l~~~g 176 (223)
T PRK14967 111 YVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSEL--------------SGVERTLTRLSEAG 176 (223)
T ss_pred CCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecc--------------cCHHHHHHHHHHCC
Confidence 11 12456778999999998662221 02346667776666
Q ss_pred Cccc--e-EEEeCccHH
Q 019199 307 IYPQ--I-ETIPIENVN 320 (344)
Q Consensus 307 ~~~~--~-~~~~~~~~~ 320 (344)
+... . +.+++....
T Consensus 177 ~~~~~~~~~~~~~~~~~ 193 (223)
T PRK14967 177 LDAEVVASQWIPFGPVL 193 (223)
T ss_pred CCeEEEEeeccCccHHH
Confidence 5432 2 445665433
No 340
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.92 E-value=0.057 Score=46.33 Aligned_cols=95 Identities=18% Similarity=0.085 Sum_probs=60.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE----------------EeCCCH-HHHHHh
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF----------------VVSSDL-EQMKAL 241 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~----------------v~~~~~-~~~~~~ 241 (344)
.++.+||+.|+| .|.-++.+|+ .|++|++++-++.-.+.+.++.+.... +...+. +.....
T Consensus 36 ~~~~rvL~~gCG-~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~ 113 (218)
T PRK13255 36 PAGSRVLVPLCG-KSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAAD 113 (218)
T ss_pred CCCCeEEEeCCC-ChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCccc
Confidence 567899999987 3777777775 799999999998877765444442110 000000 000011
Q ss_pred cCCccEEEECCCC--------chhHHHHHHhcccCCEEEEEc
Q 019199 242 GKSLDFIIDTASG--------DHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 242 ~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g 275 (344)
...+|.++|...- ...+..+.+.|+|+|+++.+.
T Consensus 114 ~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~ 155 (218)
T PRK13255 114 LADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT 155 (218)
T ss_pred CCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 2468999985531 123778888999999866543
No 341
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.047 Score=47.56 Aligned_cols=75 Identities=23% Similarity=0.253 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--CCc-E--EEeCCCHHHHHHh-------cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--GAD-K--FVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~--~v~~~~~~~~~~~-------~~~~d 246 (344)
.+.++||+|+ |.+|...++.+...|++|++++++.++.....+.. +.. . ..|..+++.+.+. .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999998 99999999988888999999999887665543333 321 1 2244454443332 25799
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99998874
No 342
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.35 Score=41.81 Aligned_cols=99 Identities=17% Similarity=0.148 Sum_probs=61.4
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHH---HhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEAL---SLLGADK---FVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~ 243 (344)
.++.++||+|+ |++|...+..+...|++++++.++.+. .+... +..+... ..|-.+.+.+.+. .+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35678999987 999999999999999998877765432 22221 2234221 1244444433222 25
Q ss_pred CccEEEECCCCch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199 244 SLDFIIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 244 ~~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~iv~~g~~ 277 (344)
++|++|.+.|... .++.+++.++..|+++.++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 7999999887421 122334455567899988754
No 343
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.91 E-value=0.089 Score=44.86 Aligned_cols=97 Identities=22% Similarity=0.166 Sum_probs=60.5
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCccEEE
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFII 249 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~dvvi 249 (344)
...++++++||-+|+|. |..+..+++.. .+|+.++.+++..+.+.+. .+.. .++..+..+... ..+.||+++
T Consensus 73 ~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~I~ 149 (212)
T PRK00312 73 LLELKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP-AYAPFDRIL 149 (212)
T ss_pred hcCCCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC-cCCCcCEEE
Confidence 34458899999999863 55555666654 4899999888766555433 3432 112111111110 125699988
Q ss_pred ECCCCchhHHHHHHhcccCCEEEEE
Q 019199 250 DTASGDHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 250 d~~g~~~~~~~~~~~l~~~G~iv~~ 274 (344)
-..........+.+.|+++|+++..
T Consensus 150 ~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 150 VTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred EccCchhhhHHHHHhcCCCcEEEEE
Confidence 6555444467888999999998755
No 344
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.053 Score=47.21 Aligned_cols=75 Identities=24% Similarity=0.280 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |.+|...++.+...|++|++++++++....+.+++ +.. ...|..+.+.+.+. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 99999999988889999999998876544332222 221 22344454433221 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999998884
No 345
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.35 Score=43.36 Aligned_cols=76 Identities=18% Similarity=0.157 Sum_probs=49.3
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEA---LSLLGADK---FVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~---~~~~g~~~---~v~~~~~~~~~~~-------~~ 243 (344)
-.+.++||+|+ |++|...+..+...|++|+++.++.++ .+.. .+..|... ..|..+.+.+.+. .+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45678999998 999999998888889999998877532 2222 12234322 2244444433221 25
Q ss_pred CccEEEECCCC
Q 019199 244 SLDFIIDTASG 254 (344)
Q Consensus 244 ~~dvvid~~g~ 254 (344)
++|++|.+.|.
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 78999988774
No 346
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.90 E-value=0.081 Score=46.33 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=50.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF 247 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv 247 (344)
.|.++||+|+ +++|.+.++.+...|++|+++++++. +.....++.+... .+|-.+.+.+.+. .+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5788999998 99999999999899999998876543 2222223445322 2355555443332 257999
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++++.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9998873
No 347
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.89 E-value=0.098 Score=46.30 Aligned_cols=95 Identities=20% Similarity=0.220 Sum_probs=72.5
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+....+..+.....--.|.+++|+|. ..+|.-+..++...|+.|++..+....+.
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~-------------------- 196 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLK-------------------- 196 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 467766666666666554468999999997 89999999999999999998876543332
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+. -++++++..++++|..
T Consensus 197 -~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin 232 (278)
T PRK14172 197 -EVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTS 232 (278)
T ss_pred -HHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeecc
Confidence 22355899999999887433 4669999999999865
No 348
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.89 E-value=0.054 Score=49.74 Aligned_cols=82 Identities=22% Similarity=0.313 Sum_probs=52.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc---------------------hhHHHH---HHhCCCcEEE---e
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST---------------------SKKEEA---LSLLGADKFV---V 231 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~---------------------~~~~~~---~~~~g~~~~v---~ 231 (344)
.+.+|+|+|+|++|..++..+...|. ++++++... .|.+.+ .+++..+..+ .
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 44779999999999999999999998 888888763 111111 1233322111 1
Q ss_pred -CCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199 232 -SSDLEQMKALGKSLDFIIDTASGDHPFDAYM 262 (344)
Q Consensus 232 -~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~ 262 (344)
.-..+.+.+...++|+|+|+..+.. .+..+
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~D~~~-~r~~i 133 (338)
T PRK12475 103 TDVTVEELEELVKEVDLIIDATDNFD-TRLLI 133 (338)
T ss_pred ccCCHHHHHHHhcCCCEEEEcCCCHH-HHHHH
Confidence 1123344555678999999998765 33333
No 349
>PLN02366 spermidine synthase
Probab=95.88 E-value=0.11 Score=46.99 Aligned_cols=95 Identities=16% Similarity=0.205 Sum_probs=61.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---------cEEEeCCCHHHHHHh-cCCccE
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKAL-GKSLDF 247 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~-~~~~dv 247 (344)
...++||++|+|. |..+..+++.-+. +|.+++-+++-.+.+++.++. -.++..+....+++. .+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568899998764 5567777887665 888888887766666443431 112222223344444 357999
Q ss_pred EEECCCC----------chhHHHHHHhcccCCEEEEE
Q 019199 248 IIDTASG----------DHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 248 vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 274 (344)
+|--... ...++.+.+.|+++|.++.-
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 8753322 12377888999999999754
No 350
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.88 E-value=0.062 Score=53.64 Aligned_cols=94 Identities=13% Similarity=0.197 Sum_probs=71.0
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchhH
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHPF 258 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~~ 258 (344)
.++|+|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...++ |..+++.+++.+ .++|.++-+++++..-
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~n 478 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTS 478 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHHH
Confidence 3679999999999999999999999999999999999988 577865433 456677777664 6799999988875422
Q ss_pred ---HHHHHhcccCCEEEEEc
Q 019199 259 ---DAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 259 ---~~~~~~l~~~G~iv~~g 275 (344)
....+.+.|.-+++...
T Consensus 479 ~~i~~~ar~~~p~~~iiaRa 498 (621)
T PRK03562 479 LQLVELVKEHFPHLQIIARA 498 (621)
T ss_pred HHHHHHHHHhCCCCeEEEEE
Confidence 23344555666666544
No 351
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.055 Score=47.30 Aligned_cols=75 Identities=24% Similarity=0.237 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |++|...++.+...|++|++++++.++.+.+.+ ..+... ..|..+.+.+.+. .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 999999999888899999999998776544322 233221 2344444333221 2578
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 352
>PRK00811 spermidine synthase; Provisional
Probab=95.85 E-value=0.13 Score=45.98 Aligned_cols=95 Identities=20% Similarity=0.272 Sum_probs=62.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC-------c---EEEeCCCHHHHHHhcCCccE
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA-------D---KFVVSSDLEQMKALGKSLDF 247 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~-------~---~~v~~~~~~~~~~~~~~~dv 247 (344)
...++||++|+|. |..+..+++..+. +|++++-+++-.+.+++.+.. + .++..+....+....+.+|+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 153 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV 153 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence 3467899999764 6677777777665 899999999888777544431 1 22223333444444467999
Q ss_pred EEECCCC----------chhHHHHHHhcccCCEEEEE
Q 019199 248 IIDTASG----------DHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 248 vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 274 (344)
++--... ...++.+.+.|+++|.++.-
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9753321 12256778899999999864
No 353
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=95.84 E-value=0.087 Score=47.80 Aligned_cols=108 Identities=24% Similarity=0.294 Sum_probs=74.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEE-ECCCCchh
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII-DTASGDHP 257 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvi-d~~g~~~~ 257 (344)
..|++|.|+|.|.+|++.++.++.+|+.+....+...+.+.+ .++++..+ ...++..+.|+++ .+..++.|
T Consensus 160 ~~gK~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~-~~~~~~~~-------d~~~~~~~sD~ivv~~pLt~~T 231 (336)
T KOG0069|consen 160 LEGKTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEA-YEYYAEFV-------DIEELLANSDVIVVNCPLTKET 231 (336)
T ss_pred ccCCEEEEecCcHHHHHHHHhhhhccceeeeecccCCchhhH-HHhccccc-------CHHHHHhhCCEEEEecCCCHHH
Confidence 468999999999999999999999996666666666666666 46665511 1223335688875 44445543
Q ss_pred H----HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199 258 F----DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI 307 (344)
Q Consensus 258 ~----~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 307 (344)
- ...+..+++++.+|.++-. ..-+.+++.+.+.+|++
T Consensus 232 ~~liNk~~~~~mk~g~vlVN~aRG-------------~iide~~l~eaL~sG~i 272 (336)
T KOG0069|consen 232 RHLINKKFIEKMKDGAVLVNTARG-------------AIIDEEALVEALKSGKI 272 (336)
T ss_pred HHHhhHHHHHhcCCCeEEEecccc-------------ccccHHHHHHHHhcCCc
Confidence 2 3567789999999988633 11235677888888877
No 354
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.83 E-value=0.1 Score=46.26 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=72.8
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+....+..+.....--.|.+++|+|. ..+|.-+.+++...|+.|++..+....+..
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~------------------- 198 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPS------------------- 198 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH-------------------
Confidence 467766666666665555468999999997 899999999999999999988765443322
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
..+.+|+++-++|.+..+. -++++++..++++|..
T Consensus 199 --~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin 233 (284)
T PRK14177 199 --IVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYN 233 (284)
T ss_pred --HHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCc
Confidence 2355999999999887332 6789999999999975
No 355
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.083 Score=46.28 Aligned_cols=74 Identities=20% Similarity=0.200 Sum_probs=52.5
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC---Cc-EEEeCCCHHHHHHh-------cCCccEE
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---AD-KFVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~-~~v~~~~~~~~~~~-------~~~~dvv 248 (344)
+.++||+|+ |.+|...+..+...|++|++++++.++.+.+.+.+. .. ...|..+.+.+.+. .+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467999998 999999998888889999999998887766544442 11 12345555444322 1468999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 998874
No 356
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.82 E-value=0.25 Score=42.86 Aligned_cols=74 Identities=22% Similarity=0.224 Sum_probs=47.7
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHH---HhCCCcEE---EeCCCHHHHHHh-------cCCc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEAL---SLLGADKF---VVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~---~~~g~~~~---v~~~~~~~~~~~-------~~~~ 245 (344)
+.++||+|+ |++|...++.+...|++|++..+ +..+..... +..+.... .|..+.+.+.+. .+++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 578899997 99999999999999998877543 333322221 23343322 344554433221 2679
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++++.|.
T Consensus 83 d~li~~ag~ 91 (246)
T PRK12938 83 DVLVNNAGI 91 (246)
T ss_pred CEEEECCCC
Confidence 999999875
No 357
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.82 E-value=0.12 Score=45.60 Aligned_cols=95 Identities=19% Similarity=0.221 Sum_probs=61.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHH-HhcCCccEEEECC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMK-ALGKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~-~~~~~~dvvid~~ 252 (344)
.++.+||-+|+|. |..+..+++. |.+|++++.+++.++.+.+. .|.. ..+...+...+. ...+.+|+|+...
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~~ 120 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHA 120 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEehh
Confidence 5567889899863 7777788774 88999999999887766433 2321 112122222222 2346799998532
Q ss_pred C-----C-chhHHHHHHhcccCCEEEEEc
Q 019199 253 S-----G-DHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 253 g-----~-~~~~~~~~~~l~~~G~iv~~g 275 (344)
. . ...+..+.+.|+|+|+++.+-
T Consensus 121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 121 VLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred HHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 2 2 234788899999999998653
No 358
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.79 E-value=0.04 Score=55.34 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=55.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHHHhCCCcEEEeCCC-HH-
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS---------------------KKEEALSLLGADKFVVSSD-LE- 236 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~---------------------~~~~~~~~~g~~~~v~~~~-~~- 236 (344)
.+++|+|+|+|..|+.++..++..|.+|+++++.+. +.+.+ +.+|.+..++..- .+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIF-TAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHH-HHCCeEEEcCCccCCcC
Confidence 489999999999999999999999999999987753 33444 6788765554321 11
Q ss_pred HHHHhcCCccEEEECCCCc
Q 019199 237 QMKALGKSLDFIIDTASGD 255 (344)
Q Consensus 237 ~~~~~~~~~dvvid~~g~~ 255 (344)
.+..+..++|.+|.++|..
T Consensus 388 ~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 2223346799999999864
No 359
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.065 Score=46.61 Aligned_cols=73 Identities=23% Similarity=0.205 Sum_probs=50.3
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCcE---EEeCCCHHHHHH-------hcCC
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GADK---FVVSSDLEQMKA-------LGKS 244 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~~~-------~~~~ 244 (344)
+.++||+|+ |++|...+..+...|++|+++++++++.+.+...+ +... ..|..+.+.+.+ ..++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999997 99999988888888999999999887765543221 2111 234455443322 1257
Q ss_pred ccEEEECCC
Q 019199 245 LDFIIDTAS 253 (344)
Q Consensus 245 ~dvvid~~g 253 (344)
+|++|.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999886
No 360
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.77 E-value=0.091 Score=46.68 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=70.8
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......|.....--.|.++.|+|. +.+|.-.+.++...|+.|++.....+. +
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~---------------------l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRN---------------------L 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence 457766666666665555468999999997 999999999999999999887433221 1
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+..+.+|+++-++|.+..+...| ++++..++++|..
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~~--ik~GavVIDvgin 232 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKEF--VKEGAVVIDVGMN 232 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHHH--ccCCcEEEEecce
Confidence 223356999999999887665544 9999999999865
No 361
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.05 Score=48.08 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=50.5
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEEEC
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFIIDT 251 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvid~ 251 (344)
+.+++|+|+ |++|...++.+...|++|++++++.++.... .+.. ...|..+.+.+.+. .+.+|++|++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 467899998 9999999998888999999999886654322 1222 23455565544332 2578999999
Q ss_pred CCC
Q 019199 252 ASG 254 (344)
Q Consensus 252 ~g~ 254 (344)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 884
No 362
>PRK06720 hypothetical protein; Provisional
Probab=95.77 E-value=0.082 Score=43.43 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=49.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+..++|.|+ +++|...+..+...|++|++++++.++.+...++ .+... ..|..+.+.+.+. -+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678899987 8999999888888899999999887655433222 24221 2333444333221 2578
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++++.|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999988874
No 363
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.76 E-value=0.11 Score=45.08 Aligned_cols=75 Identities=28% Similarity=0.331 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv 248 (344)
++.++||+|+ |.+|..++..+...|++|+...++.++++.+....+... ..|-.+.+.+.+. .+++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 999999999888899999888888777766544444321 2344444433322 2579999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
|.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 998874
No 364
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.75 E-value=0.049 Score=47.17 Aligned_cols=74 Identities=24% Similarity=0.277 Sum_probs=50.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCcc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~d 246 (344)
+.+++|.|+ |++|..++..+...|++|+++++++++.+...++ .+... ..|..+.+.+.+. .+++|
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 578999987 9999999998888999999999987765443222 23221 2233444433222 25799
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
++|.+.|.
T Consensus 87 ~vi~~ag~ 94 (239)
T PRK07666 87 ILINNAGI 94 (239)
T ss_pred EEEEcCcc
Confidence 99998874
No 365
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.75 E-value=0.26 Score=45.75 Aligned_cols=76 Identities=13% Similarity=0.033 Sum_probs=47.2
Q ss_pred CCCCEEEEECC-ChHHHH--HHHHHHHCCCeEEEEeCCch--h-------------HHHHHHhCCCcE-E--EeCCCHHH
Q 019199 179 QPGKSLGVIGL-GGLGHM--AVKFGKAFGLNVTVLSTSTS--K-------------KEEALSLLGADK-F--VVSSDLEQ 237 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~--ai~~a~~~g~~V~~~~~~~~--~-------------~~~~~~~~g~~~-~--v~~~~~~~ 237 (344)
..+.++||+|+ +++|++ .++.+ ..|+++++++...+ + ...+.++.|... . .|-.+.+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 45678899997 899999 45555 78998888874221 1 222334556432 2 24444433
Q ss_pred HHHh-------cCCccEEEECCCCc
Q 019199 238 MKAL-------GKSLDFIIDTASGD 255 (344)
Q Consensus 238 ~~~~-------~~~~dvvid~~g~~ 255 (344)
+.+. -+++|+++++.+.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 3222 26799999988866
No 366
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.75 E-value=0.16 Score=45.18 Aligned_cols=94 Identities=17% Similarity=0.225 Sum_probs=58.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---------cEEEeCCCHHHHHHhcCCccEEE
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKALGKSLDFII 249 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~~~~~dvvi 249 (344)
..++||++|+|. |..+..+++.... ++++++.+++-.+.+++.+.. -.++..+....+.+..+.+|+++
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvIi 150 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVII 150 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEEE
Confidence 445999998764 4455666666544 899999888776666443321 11222222334444456899987
Q ss_pred ECCC----------CchhHHHHHHhcccCCEEEEE
Q 019199 250 DTAS----------GDHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 250 d~~g----------~~~~~~~~~~~l~~~G~iv~~ 274 (344)
-... ....++.+.+.|+++|.++..
T Consensus 151 ~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 151 VDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred EeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence 4222 112356888999999999876
No 367
>PRK04148 hypothetical protein; Provisional
Probab=95.73 E-value=0.073 Score=41.64 Aligned_cols=74 Identities=22% Similarity=0.257 Sum_probs=50.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCC-CHHHHHHhcCCccEEEECCCCch
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSS-DLEQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~-~~~~~~~~~~~~dvvid~~g~~~ 256 (344)
.++.+++++|.| .|...+..++..|..|++++.+++..+.+ ++.+.+.+.+.- +++. ++-+++|+++..-..++
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~p~~--~~y~~a~liysirpp~e 89 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRPPRD 89 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCCCCH--HHHhcCCEEEEeCCCHH
Confidence 456889999998 78766666667899999999999988888 566654443321 1110 12256777777666665
No 368
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.054 Score=47.63 Aligned_cols=74 Identities=18% Similarity=0.205 Sum_probs=50.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCcc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~d 246 (344)
+.++||+|+ |++|..+++.+...|++|+++++++++.+.+.+. .+... ..|..+.+.+.+. .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899998 9999999999988999999999987665443222 23321 2244444433221 25789
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
+++.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99998874
No 369
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=95.72 E-value=0.12 Score=45.78 Aligned_cols=157 Identities=13% Similarity=0.149 Sum_probs=93.5
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhc--CCccEEEECCCCch
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALG--KSLDFIIDTASGDH 256 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~--~~~dvvid~~g~~~ 256 (344)
....+|+.+|+|-+|.-.+.-++.+|..|+++++-..--.. +.-...++++.-+.+.++.+. .+.|+++--+-...
T Consensus 10 ~~a~kvmLLGSGELGKEvaIe~QRLG~eViAVDrY~~APAm--qVAhrs~Vi~MlD~~al~avv~rekPd~IVpEiEAI~ 87 (394)
T COG0027 10 PQATKVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAPAM--QVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAIA 87 (394)
T ss_pred CCCeEEEEecCCccchHHHHHHHhcCCEEEEecCcCCChhh--hhhhheeeeeccCHHHHHHHHHhhCCCeeeehhhhhh
Confidence 34456888999999999999999999999999988763322 233346788888888777653 56788864333222
Q ss_pred hHHHHHHhcccCCEEEEEcCCC---------------ccccCCceee-eechHhHHHHHHHHHh-CCCccc--------e
Q 019199 257 PFDAYMSLLKVAGVYVLVGFPS---------------KVKFSPASLN-IGGTKDTQEMLEYCAA-HKIYPQ--------I 311 (344)
Q Consensus 257 ~~~~~~~~l~~~G~iv~~g~~~---------------~~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~~~--------~ 311 (344)
...+.+.=..+.++|-..... .+.++...+. ..+.+.+.++.+.+.- ...+|. .
T Consensus 88 -td~L~elE~~G~~VVP~ArAt~ltMnRegiRrlAAeeLglpTs~Y~fa~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqs 166 (394)
T COG0027 88 -TDALVELEEEGYTVVPNARATKLTMNREGIRRLAAEELGLPTSKYRFADSLEELRAAVEKIGFPCVVKPVMSSSGKGQS 166 (394)
T ss_pred -HHHHHHHHhCCceEccchHHHHhhhcHHHHHHHHHHHhCCCCccccccccHHHHHHHHHHcCCCeecccccccCCCCce
Confidence 444455555666665443211 2223322222 1222334444333321 112332 1
Q ss_pred EEEeCccHHHHHHHHHcCCc--ceEEEEE
Q 019199 312 ETIPIENVNEALERLIKRDV--KYRFVID 338 (344)
Q Consensus 312 ~~~~~~~~~~a~~~~~~~~~--~gkvvi~ 338 (344)
-+-+-+|+++||+....+.. .+||+++
T Consensus 167 vv~~~e~ve~AW~~A~~g~R~~~~RVIVE 195 (394)
T COG0027 167 VVRSPEDVEKAWEYAQQGGRGGSGRVIVE 195 (394)
T ss_pred eecCHHHHHHHHHHHHhcCCCCCCcEEEE
Confidence 13378999999998887433 4788765
No 370
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.71 E-value=0.074 Score=47.24 Aligned_cols=77 Identities=21% Similarity=0.216 Sum_probs=53.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc------EEEeCCCHHHHHH--------
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD------KFVVSSDLEQMKA-------- 240 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~------~~v~~~~~~~~~~-------- 240 (344)
-.|..+||+|+ .++|.+.+..+...|++|+++.+++++.+...+.. +.. ...|..+.+..++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788899987 89999999999999999999999999866554332 221 2223333332222
Q ss_pred hcCCccEEEECCCCc
Q 019199 241 LGKSLDFIIDTASGD 255 (344)
Q Consensus 241 ~~~~~dvvid~~g~~ 255 (344)
..+++|+.+++.|..
T Consensus 86 ~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 86 FFGKIDILVNNAGAL 100 (270)
T ss_pred hCCCCCEEEEcCCcC
Confidence 136799999988743
No 371
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.69 E-value=0.14 Score=45.57 Aligned_cols=95 Identities=19% Similarity=0.193 Sum_probs=71.7
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......+.....--.|.+++|+|. ..+|.-+..++...|+.|++..+....+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l--------------------- 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNL--------------------- 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhH---------------------
Confidence 467776666666666655468999999997 8999999999999999999876443222
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+..+.+|+++-++|.+..+ --+.++++..++++|..
T Consensus 196 ~~~~~~ADIvI~AvG~p~~i--~~~~ik~gavVIDvGi~ 232 (284)
T PRK14190 196 AELTKQADILIVAVGKPKLI--TADMVKEGAVVIDVGVN 232 (284)
T ss_pred HHHHHhCCEEEEecCCCCcC--CHHHcCCCCEEEEeecc
Confidence 22335589999999988732 25678999999999866
No 372
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.68 E-value=0.12 Score=45.80 Aligned_cols=95 Identities=16% Similarity=0.134 Sum_probs=72.8
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+....+..+.....--.|.+++|+|. ..+|.-+..++...|++|++..+....+..
T Consensus 137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~------------------- 197 (282)
T PRK14180 137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS------------------- 197 (282)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH-------------------
Confidence 467776666666766655467999999997 799999999999999999888755432221
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.++.+|+++-++|.+..+. -++++++..++++|..
T Consensus 198 --~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin 232 (282)
T PRK14180 198 --HTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGIN 232 (282)
T ss_pred --HhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEeccc
Confidence 2355999999999887433 4789999999999865
No 373
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.28 Score=42.72 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=48.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHhC---CCc---EEEeCCCHHHHHH----hc-----
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSLL---GAD---KFVVSSDLEQMKA----LG----- 242 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~----~~----- 242 (344)
.+.+++|+|+ |++|..+++.+...|++|++. .++.++.+.+.+.+ +.. ...|-.+.+.+.+ ..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999998 999999999888889988775 56655544332222 222 1234455443322 11
Q ss_pred ----CCccEEEECCCC
Q 019199 243 ----KSLDFIIDTASG 254 (344)
Q Consensus 243 ----~~~dvvid~~g~ 254 (344)
+++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 368999998874
No 374
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.078 Score=47.03 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=50.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-----Cc-EE--EeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-----AD-KF--VVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-----~~-~~--v~~~~~~~~~~~-------~~ 243 (344)
++.++||.|+ |.+|.++++.+...|++|++++++.++.+...+++. .. .+ .|-.+.+.+.+. .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3678999998 999999999999899999999988776544322221 11 12 244444433222 24
Q ss_pred CccEEEECCC
Q 019199 244 SLDFIIDTAS 253 (344)
Q Consensus 244 ~~dvvid~~g 253 (344)
++|++|.+.|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 375
>PLN02244 tocopherol O-methyltransferase
Probab=95.67 E-value=0.08 Score=48.76 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=62.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCC--cEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGA--DKFVVSSDLEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~--~~~v~~~~~~~~~~~~~~~dvvid~~g 253 (344)
+++++||-+|+|. |..+..+++..|++|++++.+++..+.+.+ +.|. ...+...+...+....+.||+|+....
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~ 195 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMES 195 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCc
Confidence 6788999999863 667778888889999999999886655532 2232 111111111111111256999986433
Q ss_pred C------chhHHHHHHhcccCCEEEEEcCC
Q 019199 254 G------DHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 254 ~------~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
. ...+.++.+.|+|+|+++...+.
T Consensus 196 ~~h~~d~~~~l~e~~rvLkpGG~lvi~~~~ 225 (340)
T PLN02244 196 GEHMPDKRKFVQELARVAAPGGRIIIVTWC 225 (340)
T ss_pred hhccCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1 23477888999999999987543
No 376
>PRK14982 acyl-ACP reductase; Provisional
Probab=95.67 E-value=0.053 Score=49.57 Aligned_cols=94 Identities=18% Similarity=0.282 Sum_probs=64.6
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD 255 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~ 255 (344)
-.+.+|+|+|+ |.+|..+++.+.. .|+ +++++.++.+++..+.++++...+ ..+.+...++|+|+.+++.+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence 36789999998 9999998888854 565 899999888888777555542211 12333345799999988875
Q ss_pred hhHHHHHHhcccCCEEEEEcCCC
Q 019199 256 HPFDAYMSLLKVAGVYVLVGFPS 278 (344)
Q Consensus 256 ~~~~~~~~~l~~~G~iv~~g~~~ 278 (344)
..+..-...+++.-.+++++.+.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 43212224557777888888773
No 377
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.64 E-value=0.094 Score=47.69 Aligned_cols=74 Identities=26% Similarity=0.333 Sum_probs=52.2
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCC---c-E--EEeCCCHHHHHHh-------cCCc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGA---D-K--FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~---~-~--~v~~~~~~~~~~~-------~~~~ 245 (344)
+.++||+|+ +++|.+.+..+...| ++|++++++.++.+.+.++++. . . ..|-.+.+.+.+. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568999998 899999888888889 8999999988877665455431 1 1 2355554433221 2579
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|++.|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998773
No 378
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.64 E-value=0.065 Score=48.92 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=37.2
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS 222 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~ 222 (344)
+.|.+++|+|+ +++|.+.+..+...|++|+++++++++++.+.+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~ 95 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSD 95 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence 35889999998 999999888888889999999999988765533
No 379
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=95.63 E-value=0.17 Score=46.26 Aligned_cols=107 Identities=18% Similarity=0.282 Sum_probs=71.0
Q ss_pred CCCEEEEECCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP 257 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~-~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~ 257 (344)
.|.++.|+|.|.+|...++.++ .+|.+|++.++..... .. ..++... .+ +.++-...|+|.-+..- +.+
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~-~~-~~~~~~~----~~---l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKE-AE-ERFNARY----CD---LDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchh-hH-HhcCcEe----cC---HHHHHHhCCEEEEeCCCChHH
Confidence 6789999999999999999998 8999999887654322 11 2445321 12 23334568998876653 221
Q ss_pred ----HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199 258 ----FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 258 ----~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (344)
-...++.|+++..+|.++-..-+ +-+.+++.+.+|++.
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~aRG~vV-------------de~AL~~AL~~g~i~ 256 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAGRGPVV-------------DENALIAALQKGEIH 256 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECCCcccc-------------CHHHHHHHHHcCCee
Confidence 23577889999999888633111 235666777777764
No 380
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.62 E-value=0.12 Score=45.34 Aligned_cols=74 Identities=22% Similarity=0.158 Sum_probs=49.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFII 249 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvi 249 (344)
.+.+++|+|+ |++|.+.++.+...|++|+++.++.++ .+.+ +..+.. ...|-.+++.+.+. .+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-REKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-HhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999997 999999999988899999887665443 3333 233332 22355555443332 25799999
Q ss_pred ECCCC
Q 019199 250 DTASG 254 (344)
Q Consensus 250 d~~g~ 254 (344)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 98874
No 381
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.60 E-value=0.016 Score=55.57 Aligned_cols=92 Identities=16% Similarity=0.150 Sum_probs=60.4
Q ss_pred ccCCCCCCEEE----EECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEE
Q 019199 175 HKMNQPGKSLG----VIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFI 248 (344)
Q Consensus 175 ~~~~~~g~~vl----I~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvv 248 (344)
..++++|+.+| |+|+ |++|.+++++++..|++|+.+.+.+.+.... +..+.+ .++|.+..+....+..
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~l~~----- 101 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-WGDRFGALVFDATGITDPADLKA----- 101 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccC-cCCcccEEEEECCCCCCHHHHHH-----
Confidence 45568888888 7765 9999999999999999999887665533322 233333 3455443222111100
Q ss_pred EECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
-...+..+++.+.++|+++.++..
T Consensus 102 -----~~~~~~~~l~~l~~~griv~i~s~ 125 (450)
T PRK08261 102 -----LYEFFHPVLRSLAPCGRVVVLGRP 125 (450)
T ss_pred -----HHHHHHHHHHhccCCCEEEEEccc
Confidence 012366778888999999999865
No 382
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.58 E-value=0.19 Score=45.99 Aligned_cols=105 Identities=16% Similarity=0.225 Sum_probs=71.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--- 256 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--- 256 (344)
.|.+|.|+|.|.+|...++.++.+|.+|++.+++.+..... .. .. ..+.+...+.|+++.++....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence 67789999999999999999999999999999876532211 00 10 112334466899998887542
Q ss_pred --hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199 257 --PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 257 --~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (344)
.....+..++++..+|.++-..-. +-+.+++.+.+|++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aRG~~v-------------d~~aL~~aL~~g~i~ 254 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAARGAVI-------------NTPDLIAAVNDGTLL 254 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCCcccc-------------CHHHHHHHHHcCCee
Confidence 123556778888888888643111 245677778888775
No 383
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.091 Score=45.52 Aligned_cols=75 Identities=16% Similarity=0.114 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |.+|..++..+...|++|+++++++++.+.+.+. .+.. ...|-.+.+.+.+. .+++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999987 9999999999988999999999988765544322 2222 12344444433221 2569
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 85 d~lv~~ag~ 93 (241)
T PRK07454 85 DVLINNAGM 93 (241)
T ss_pred CEEEECCCc
Confidence 999998874
No 384
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.57 E-value=0.14 Score=45.45 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=72.2
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......|.....--.|.+++|+|. ..+|.-+.+++...|+.|++..+....+.
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~-------------------- 194 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK-------------------- 194 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH--------------------
Confidence 467776666666666655468999999997 79999999999999999998865543322
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+. -++++++..++++|..
T Consensus 195 -~~~~~ADIvI~AvG~p~~i~--~~~vk~GavVIDvGin 230 (282)
T PRK14169 195 -QLTKEADILVVAVGVPHFIG--ADAVKPGAVVIDVGIS 230 (282)
T ss_pred -HHHhhCCEEEEccCCcCccC--HHHcCCCcEEEEeecc
Confidence 22355899999999887332 5689999999999865
No 385
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.57 E-value=0.096 Score=47.87 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhCCC-c-E--EEeCCCHHHHHHhcCCccEEEECC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLLGA-D-K--FVVSSDLEQMKALGKSLDFIIDTA 252 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~-~-~--~v~~~~~~~~~~~~~~~dvvid~~ 252 (344)
.|.++||+|+ |.+|..++..+...| .+|++++++..+...+.+.+.. . . ..|..+.+.+.+.-.++|++|.+.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 3678999987 999999888877665 5898888776654433233321 1 1 225566666665556799999987
Q ss_pred CC
Q 019199 253 SG 254 (344)
Q Consensus 253 g~ 254 (344)
+.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 73
No 386
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.57 E-value=0.21 Score=48.85 Aligned_cols=88 Identities=28% Similarity=0.358 Sum_probs=63.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--- 256 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--- 256 (344)
.|.++.|+|.|.+|...++.++.+|.+|++.++.... +.. ..+|.... + +.++....|+++.++....
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-~~~g~~~~----~---l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERA-AQLGVELV----S---LDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHH-HhcCCEEE----c---HHHHHhhCCEEEEccCCChHhh
Confidence 5889999999999999999999999999999975432 222 35565432 1 2333456899988777432
Q ss_pred -hH-HHHHHhcccCCEEEEEcC
Q 019199 257 -PF-DAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 257 -~~-~~~~~~l~~~G~iv~~g~ 276 (344)
.+ ...+..++++..+|.++-
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 12 467788999998888863
No 387
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.57 E-value=0.14 Score=44.19 Aligned_cols=70 Identities=24% Similarity=0.283 Sum_probs=53.3
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHhCCCcEE-EeCCCHHHHHHhcCCccEEEECCCC
Q 019199 184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK--KEEALSLLGADKF-VVSSDLEQMKALGKSLDFIIDTASG 254 (344)
Q Consensus 184 vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~dvvid~~g~ 254 (344)
|+|+|+ |.+|...++.+...+.+|.++.++... ...+ +..|++.+ .|..+.+.+.+.-+|+|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l-~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQL-QALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHH-HHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhh-hcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689998 999999999999888899999998753 3444 56787543 2455667777666899999998883
No 388
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.57 E-value=0.055 Score=45.66 Aligned_cols=94 Identities=17% Similarity=0.202 Sum_probs=58.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE-EEeCCCHHHHHHhcCCccEEEECCCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK-FVVSSDLEQMKALGKSLDFIIDTASG 254 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~ 254 (344)
.++.+||-+|+|. |..+..+++. |.+|++++.+++-.+.+++ ..+... .+...+.... ...+.+|+|+.....
T Consensus 29 ~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~ 105 (197)
T PRK11207 29 VKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVVL 105 (197)
T ss_pred CCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecch
Confidence 5678899999864 7777788774 8899999999876555432 222211 1111111111 123569999875431
Q ss_pred --------chhHHHHHHhcccCCEEEEEc
Q 019199 255 --------DHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 255 --------~~~~~~~~~~l~~~G~iv~~g 275 (344)
...+..+.+.|+|+|+++.+.
T Consensus 106 ~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 106 MFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 133667778899999965543
No 389
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.57 E-value=0.089 Score=44.95 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=29.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~ 213 (344)
...+|+|+|+|++|..+++.+...|. +++++|..
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44679999999999999999999999 78888876
No 390
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.56 E-value=0.092 Score=45.96 Aligned_cols=76 Identities=22% Similarity=0.257 Sum_probs=52.4
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCc---EEEeCCCHHHHHH----h---cCC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD---KFVVSSDLEQMKA----L---GKS 244 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~----~---~~~ 244 (344)
-.+.+++|+|+ |++|...+..+...|++|+++++++++.+.+.+ +.+.. ...|..+.+.+.+ . .++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 35789999998 999999998888889999999998776544422 23421 1224445443322 1 256
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++.+.|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 391
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.1 Score=45.71 Aligned_cols=75 Identities=25% Similarity=0.243 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHH---HhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEAL---SLLGAD---KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~---~~~g~~---~~v~~~~~~~~~~~-------~~~ 244 (344)
.+.+++|+|+ |++|..+++.+...|++ |++++++.++..... +..+.. ..+|..+.+.+.+. -++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 99999999999999997 999998866554222 233432 22355555443332 157
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|++|++.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 392
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.54 E-value=0.1 Score=46.32 Aligned_cols=74 Identities=24% Similarity=0.243 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.+++|+|+ |++|.+.+..+...|++|++++++.++.+.+.++ .+... ..|..+.+.+... .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999999999988999999999887765444333 23221 2234444333221 2579
Q ss_pred cEEEECCC
Q 019199 246 DFIIDTAS 253 (344)
Q Consensus 246 dvvid~~g 253 (344)
|++|.+.|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999887
No 393
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.071 Score=46.81 Aligned_cols=76 Identities=14% Similarity=0.110 Sum_probs=49.3
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchh-HHHHHHh---CCC-c-E--EEeCCCHHHH----HHh--c
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSK-KEEALSL---LGA-D-K--FVVSSDLEQM----KAL--G 242 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~-~~~~~~~---~g~-~-~--~v~~~~~~~~----~~~--~ 242 (344)
..+.++||+|+ |++|.+.++.+... |++|+++++++++ ++.+.++ .+. + + ..|..+.+.+ ++. .
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 56778999998 99999988876666 4899999998775 4433222 232 1 1 2344444322 222 1
Q ss_pred CCccEEEECCCC
Q 019199 243 KSLDFIIDTASG 254 (344)
Q Consensus 243 ~~~dvvid~~g~ 254 (344)
+++|+++.+.|.
T Consensus 86 g~id~li~~ag~ 97 (253)
T PRK07904 86 GDVDVAIVAFGL 97 (253)
T ss_pred CCCCEEEEeeec
Confidence 579999887764
No 394
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.52 E-value=0.11 Score=43.30 Aligned_cols=114 Identities=12% Similarity=0.054 Sum_probs=75.3
Q ss_pred ccchhhhHhHHHHHhccC---------CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-E
Q 019199 160 PLLCAGITVYTPMMRHKM---------NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-K 228 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~---------~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~ 228 (344)
.+||+.......|..... --.|.+++|+|- ..+|.=+..++...||+|++++.+.-.. . ..-+.. +
T Consensus 32 ~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~-~~~~~~~h 108 (197)
T cd01079 32 ILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--F-TRGESIRH 108 (197)
T ss_pred ccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--c-cccccccc
Confidence 456666666665654432 267999999997 7999999999999999999886443211 1 011100 0
Q ss_pred EEeC-CC-HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 229 FVVS-SD-LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 229 ~v~~-~~-~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
--.. .+ +..+.+..+.+|+++-++|.+. +.---+.++++..+|++|..
T Consensus 109 s~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 109 EKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASI 158 (197)
T ss_pred ccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCC
Confidence 0000 11 1224455688999999999987 43336789999999999866
No 395
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=95.49 E-value=0.13 Score=47.11 Aligned_cols=97 Identities=20% Similarity=0.209 Sum_probs=62.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCC---
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTAS--- 253 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g--- 253 (344)
.++.+||-+|+|. |..+..+++..+ .+|++++.+++.++.+.+...... -+...+...+....+.+|+|+.+..
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~~ 190 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhhh
Confidence 5778999999865 667777787764 589999999887777754432111 1111111111111246898876432
Q ss_pred ---CchhHHHHHHhcccCCEEEEEcC
Q 019199 254 ---GDHPFDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 254 ---~~~~~~~~~~~l~~~G~iv~~g~ 276 (344)
....++++.+.|+++|+++.++.
T Consensus 191 ~~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 191 WPDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 12347889999999999988754
No 396
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.49 E-value=0.14 Score=45.15 Aligned_cols=75 Identities=19% Similarity=0.256 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ +++|.+.+..+...|++|+++++++++.+.+.+. .|... ..|-.+.+.+.+. .+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5678999998 9999998888888999999999888766544322 34322 2344554433322 2568
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999998874
No 397
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.49 E-value=0.54 Score=40.55 Aligned_cols=75 Identities=27% Similarity=0.286 Sum_probs=48.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHH---hCCCcE-EE--eCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALS---LLGADK-FV--VSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~---~~g~~~-~v--~~~~~~~~~~~-------~~~ 244 (344)
.+.++||+|+ |.+|...+..+...|++|+++.++.++ .+...+ ..+... .+ |..+.+.+.+. ..+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3568999998 999999999998899999777766542 222211 223222 22 44554433221 247
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 398
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.48 E-value=0.37 Score=41.41 Aligned_cols=98 Identities=18% Similarity=0.255 Sum_probs=59.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc------hhH-HHHHHhCCC---------------cEEEeCC---
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST------SKK-EEALSLLGA---------------DKFVVSS--- 233 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~------~~~-~~~~~~~g~---------------~~~v~~~--- 233 (344)
..++|+|+|.|++|.+++..+-..|. +++.++... +|. ..+....|- ..-++..
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 34789999999999999999999998 888877442 221 111112221 0001111
Q ss_pred -CHHHHHHh-cCCccEEEECCCCchh-HHHHHHhcccCCEEEEEcCC
Q 019199 234 -DLEQMKAL-GKSLDFIIDTASGDHP-FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 234 -~~~~~~~~-~~~~dvvid~~g~~~~-~~~~~~~l~~~G~iv~~g~~ 277 (344)
.++.+.++ ..++|+|+|+..+-.. ...+..|.+.+=.+|..+..
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga 155 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA 155 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence 12333443 3689999999987553 33344466666667766544
No 399
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.48 E-value=0.16 Score=45.26 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=71.8
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......|...+.--.|.+++|+|. ..+|.=+..++...|+.|++..+....+.
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~-------------------- 193 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP-------------------- 193 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 467766666666665554457999999997 89999999999999999998775543322
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+ --+.++++..++++|..
T Consensus 194 -~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin 229 (287)
T PRK14173 194 -AVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGIN 229 (287)
T ss_pred -HHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence 2235589999999988733 35778999999999866
No 400
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.47 E-value=0.36 Score=41.96 Aligned_cols=74 Identities=23% Similarity=0.196 Sum_probs=47.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cC-Ccc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADK---FVVSSDLEQMKAL-------GK-SLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~-~~d 246 (344)
.+.++||+|+ |++|...+..+...|++|++..+ .+++.+.+..+++... ..|..+.+.+.+. .+ ++|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 3568999997 99999999988889999987655 3444444434444221 1244444433221 13 399
Q ss_pred EEEECCC
Q 019199 247 FIIDTAS 253 (344)
Q Consensus 247 vvid~~g 253 (344)
+++.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9998875
No 401
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.46 E-value=0.21 Score=45.38 Aligned_cols=111 Identities=27% Similarity=0.363 Sum_probs=74.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-ch--
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DH-- 256 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~-- 256 (344)
.|.+|.|+|.|.+|...+++++.+|.+|++.++..... ..+.. .. .+.++-...|+|.-+... +.
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~~----~~---~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEYE----RV---SLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCce----ee---cHHHHhhcCCEEEEeCCCCchhh
Confidence 68999999999999999999999999999998753211 11211 11 233444558888776652 22
Q ss_pred --hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEeC
Q 019199 257 --PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPI 316 (344)
Q Consensus 257 --~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~ 316 (344)
.-...++.|+++..+|.++-..-+ +-+.+++.+.+|++. - ..+|.-
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aRG~vV-------------De~AL~~AL~~g~i~-AaLDV~~~ 260 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGRGGIV-------------NEKDLAKALDEKDIY-AGLDVLEK 260 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCCcccc-------------CHHHHHHHHHcCCeE-EEEecCCC
Confidence 134677889999999888633211 245677888888876 4 255533
No 402
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.46 E-value=0.19 Score=44.22 Aligned_cols=95 Identities=23% Similarity=0.238 Sum_probs=63.8
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC--
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-- 254 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-- 254 (344)
+.++++||-+|+|. |..+..+++.. +.+|++++.+++..+.+.+.+.....+..+ ...+. ....+|+|+....-
T Consensus 29 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d-~~~~~-~~~~fD~v~~~~~l~~ 105 (258)
T PRK01683 29 LENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD-IASWQ-PPQALDLIFANASLQW 105 (258)
T ss_pred CcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc-hhccC-CCCCccEEEEccChhh
Confidence 37889999999863 66677888776 569999999998888775554322222222 11111 12478998764431
Q ss_pred ----chhHHHHHHhcccCCEEEEEc
Q 019199 255 ----DHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 255 ----~~~~~~~~~~l~~~G~iv~~g 275 (344)
...+..+.+.|+++|+++...
T Consensus 106 ~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 106 LPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 234788889999999998753
No 403
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.45 E-value=0.095 Score=45.99 Aligned_cols=75 Identities=19% Similarity=0.188 Sum_probs=50.3
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGAD---KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~---~~v~~~~~~~~~~~-------~~~ 244 (344)
..+.++||+|+ |++|.+.++.+...|++|++++++ ++.+.+ ..+.+.. ...|..+.+.+.+. .++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 999999999998899999999887 332222 2233432 12344454433322 257
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 404
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.085 Score=46.90 Aligned_cols=74 Identities=20% Similarity=0.211 Sum_probs=50.7
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--c---EEEeCCCHHHHHH---h---cCCc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--D---KFVVSSDLEQMKA---L---GKSL 245 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~---~~v~~~~~~~~~~---~---~~~~ 245 (344)
+.++||+|+ |.+|...+..+...|++|++++++.++.+...+. .+. . ...|..+.+.+.+ . .+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 567899998 9999999998888999999999887765444222 221 1 1235555543322 1 2578
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999998874
No 405
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.45 E-value=0.34 Score=42.10 Aligned_cols=69 Identities=19% Similarity=0.164 Sum_probs=47.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv 248 (344)
.+.++||+|+ |.+|...+..+...|++|++++++. . +..+.. ...|..+.+.+.+. .+++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 8999999998888999999998875 1 222321 12344444433332 2568999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998874
No 406
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.45 E-value=0.17 Score=45.26 Aligned_cols=95 Identities=19% Similarity=0.212 Sum_probs=70.8
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
..||+.......+...+.--.|.+++|+|. ..+|.-+..++...|++|++..+....+..
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~------------------- 197 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS------------------- 197 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH-------------------
Confidence 456666666666665554467999999997 899999999999999999988655433322
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
..+.+|+++-++|.+..+. -+.++++..++++|..
T Consensus 198 --~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin 232 (297)
T PRK14186 198 --ITREADILVAAAGRPNLIG--AEMVKPGAVVVDVGIH 232 (297)
T ss_pred --HHhhCCEEEEccCCcCccC--HHHcCCCCEEEEeccc
Confidence 2345899999999876332 5688999999999866
No 407
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.43 E-value=0.098 Score=45.51 Aligned_cols=75 Identities=24% Similarity=0.240 Sum_probs=50.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCc---EEEeCCCHHHHHH----h---cCCccE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGAD---KFVVSSDLEQMKA----L---GKSLDF 247 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~---~~v~~~~~~~~~~----~---~~~~dv 247 (344)
.|.++||+|+ |++|.+.+..+...|++|++++++.. +.....++.+.. ...|..+.+.+.. . .+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4788999998 99999999999889999999988653 222222344432 1234444443322 1 257999
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++++.|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9998874
No 408
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.43 E-value=0.024 Score=45.47 Aligned_cols=89 Identities=18% Similarity=0.171 Sum_probs=57.2
Q ss_pred EEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC-------CC-HHHHHHhcCCccEEEECCCCc
Q 019199 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS-------SD-LEQMKALGKSLDFIIDTASGD 255 (344)
Q Consensus 184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~-------~~-~~~~~~~~~~~dvvid~~g~~ 255 (344)
++|+|+|.+|...+..++..|.+|..+.+.+ +.+.. ++.|....... .. ........+.+|++|-|+-..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAI-KEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHH-HHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhh-hheeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence 5789999999998888887999999999988 66665 45553211111 00 000012236799999999876
Q ss_pred hhHHHHHHhc----ccCCEEEEEc
Q 019199 256 HPFDAYMSLL----KVAGVYVLVG 275 (344)
Q Consensus 256 ~~~~~~~~~l----~~~G~iv~~g 275 (344)
. ...+++.+ .+...++.+-
T Consensus 79 ~-~~~~l~~l~~~~~~~t~iv~~q 101 (151)
T PF02558_consen 79 Q-LEQALQSLKPYLDPNTTIVSLQ 101 (151)
T ss_dssp G-HHHHHHHHCTGEETTEEEEEES
T ss_pred c-hHHHHHHHhhccCCCcEEEEEe
Confidence 5 55555555 4455666663
No 409
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional
Probab=95.43 E-value=0.16 Score=45.23 Aligned_cols=95 Identities=21% Similarity=0.215 Sum_probs=61.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAF----GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG 254 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~----g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~ 254 (344)
..+.+||-+|+|. |..+..+++.. ++.++.++.+++-.+.+.+..+....+..+. ..+.-....+|+|+....
T Consensus 84 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~~d~-~~lp~~~~sfD~I~~~~~- 160 (272)
T PRK11088 84 EKATALLDIGCGE-GYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCVASS-HRLPFADQSLDAIIRIYA- 160 (272)
T ss_pred CCCCeEEEECCcC-CHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEEeec-ccCCCcCCceeEEEEecC-
Confidence 4557788899863 66677776654 3479999999988888755544222221111 111111246999987654
Q ss_pred chhHHHHHHhcccCCEEEEEcC
Q 019199 255 DHPFDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 255 ~~~~~~~~~~l~~~G~iv~~g~ 276 (344)
+..+.++.+.|+|+|+++.+..
T Consensus 161 ~~~~~e~~rvLkpgG~li~~~p 182 (272)
T PRK11088 161 PCKAEELARVVKPGGIVITVTP 182 (272)
T ss_pred CCCHHHHHhhccCCCEEEEEeC
Confidence 4448899999999999998753
No 410
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.42 E-value=0.15 Score=46.45 Aligned_cols=108 Identities=22% Similarity=0.286 Sum_probs=69.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh-
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP- 257 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~- 257 (344)
.|.+|-|+|.|.+|..+++.++.+|.+|++.++...+.. . ...+. .-.. .++++-...|++.-.+.- +.|
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~~-~-~~~~~---~~~~---~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRER-A-GVDGV---VGVD---SLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchhh-h-ccccc---eecc---cHHHHHhhCCEEEEcCCCCcchh
Confidence 388999999999999999999999999999998333221 1 11221 1112 223333457888765552 221
Q ss_pred ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199 258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308 (344)
Q Consensus 258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (344)
-...+..|+++..+|.++-..- -+-+.+++.+++|++.
T Consensus 213 g~i~~~~~a~MK~gailIN~aRG~v-------------Vde~aL~~AL~~G~i~ 253 (324)
T COG0111 213 GLINAEELAKMKPGAILINAARGGV-------------VDEDALLAALDSGKIA 253 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCCcce-------------ecHHHHHHHHHcCCcc
Confidence 2356677888887777653221 1346788888888885
No 411
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.42 E-value=0.14 Score=44.95 Aligned_cols=74 Identities=22% Similarity=0.211 Sum_probs=49.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HhCCCc---EEEeCCCHHHHHHh-------cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD---KFVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~--~~~g~~---~~v~~~~~~~~~~~-------~~~~d 246 (344)
.+.++||+|+ |++|.+.++.+...|++|+++++++...+... +..+.+ ...|..+.+.+.+. .+++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 4678999998 99999999999889999999988753222211 123432 22355554333221 25799
Q ss_pred EEEECCC
Q 019199 247 FIIDTAS 253 (344)
Q Consensus 247 vvid~~g 253 (344)
+++.+.|
T Consensus 87 ~lv~nAg 93 (260)
T PRK12823 87 VLINNVG 93 (260)
T ss_pred EEEECCc
Confidence 9999887
No 412
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=95.41 E-value=0.16 Score=46.23 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=60.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-----cEEEeCCCHHHHHHhcCCccEEEEC--
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-----DKFVVSSDLEQMKALGKSLDFIIDT-- 251 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-----~~~v~~~~~~~~~~~~~~~dvvid~-- 251 (344)
.+|.+||=+|+|. |..+..+++ .|++|++++.+++..+.+++.... ...+...+.+.+....+.||+|+..
T Consensus 130 ~~g~~ILDIGCG~-G~~s~~La~-~g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~dae~l~~~~~~FD~Vi~~~v 207 (322)
T PLN02396 130 FEGLKFIDIGCGG-GLLSEPLAR-MGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEV 207 (322)
T ss_pred CCCCEEEEeeCCC-CHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEecCHHHhhhccCCCCEEEEhhH
Confidence 4677888899853 445555554 688999999999988777543321 1111112222222223579999742
Q ss_pred ---CCC-chhHHHHHHhcccCCEEEEEc
Q 019199 252 ---ASG-DHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 252 ---~g~-~~~~~~~~~~l~~~G~iv~~g 275 (344)
+.. ...+..+.+.|+|+|+++..-
T Consensus 208 LeHv~d~~~~L~~l~r~LkPGG~liist 235 (322)
T PLN02396 208 IEHVANPAEFCKSLSALTIPNGATVLST 235 (322)
T ss_pred HHhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 222 234778888999999998764
No 413
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.41 E-value=0.087 Score=48.25 Aligned_cols=90 Identities=16% Similarity=0.178 Sum_probs=63.6
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-------CCc---EEEeCCCHHHHHHhcCCccEEEEC
Q 019199 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-------GAD---KFVVSSDLEQMKALGKSLDFIIDT 251 (344)
Q Consensus 182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-------g~~---~~v~~~~~~~~~~~~~~~dvvid~ 251 (344)
-+|.|+|+|.+|.+.+..+...|.+|++.++++++.+.+.+.. |.. .+....+. .+.....|+|+-+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~---~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADP---EEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCH---HHHHcCCCEEEEE
Confidence 3688999999999999998888999999999888776663221 210 01111122 2223568999999
Q ss_pred CCCchhHHHHHHhcccCCEEEEEc
Q 019199 252 ASGDHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 252 ~g~~~~~~~~~~~l~~~G~iv~~g 275 (344)
+.... ...+++.++++-.++.+.
T Consensus 82 v~~~~-~~~v~~~l~~~~~vi~~~ 104 (328)
T PRK14618 82 VPSKA-LRETLAGLPRALGYVSCA 104 (328)
T ss_pred CchHH-HHHHHHhcCcCCEEEEEe
Confidence 98886 788888888877766663
No 414
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.39 E-value=0.082 Score=45.92 Aligned_cols=75 Identities=23% Similarity=0.201 Sum_probs=50.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ |.+|...+..+...|++|++++++.++...+.+ ..+... ..|..+.+.+.+. -+++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999997 999999999888889999999998665433322 223221 1244454433332 1478
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.+.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999998764
No 415
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.12 Score=44.80 Aligned_cols=41 Identities=29% Similarity=0.353 Sum_probs=35.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA 220 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~ 220 (344)
.+.+++|+|+ |++|...++.+...|++|+++++++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHH
Confidence 4578999998 9999999999988999999999998876554
No 416
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.39 E-value=0.11 Score=48.02 Aligned_cols=86 Identities=13% Similarity=0.123 Sum_probs=55.4
Q ss_pred HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHH----HHHHhCCC------cEE-EeCCC
Q 019199 167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKE----EALSLLGA------DKF-VVSSD 234 (344)
Q Consensus 167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~----~~~~~~g~------~~~-v~~~~ 234 (344)
|||.-++...+ -.+.+|||+|+ |-+|..++..+...|.+|+++++...... ......+. ..+ .|-.+
T Consensus 2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 56665544444 45578999997 99999999999999999999987543211 11111111 111 23444
Q ss_pred HHHHHHhcCCccEEEECCC
Q 019199 235 LEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 235 ~~~~~~~~~~~dvvid~~g 253 (344)
.+.+..+..++|+||.+.+
T Consensus 81 ~~~l~~~~~~~d~ViHlAa 99 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAA 99 (348)
T ss_pred HHHHHHHhhCCCEEEECcc
Confidence 5555555567999999875
No 417
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.36 E-value=0.2 Score=42.21 Aligned_cols=95 Identities=16% Similarity=0.141 Sum_probs=56.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKFVVSSDLEQMKALGKSLDFIIDTASG- 254 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~- 254 (344)
.++.+||-+|+|. |..+..+++ .|.+|++++.+++-.+.+.+ ..+........+.... .....+|+|+....-
T Consensus 29 ~~~~~vLDiGcG~-G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~~ 105 (195)
T TIGR00477 29 VAPCKTLDLGCGQ-GRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA-ALNEDYDFIFSTVVFM 105 (195)
T ss_pred CCCCcEEEeCCCC-CHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc-cccCCCCEEEEecccc
Confidence 4567888899863 666777776 47899999999876655422 2232211111111111 123569999764321
Q ss_pred -------chhHHHHHHhcccCCEEEEEcC
Q 019199 255 -------DHPFDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 255 -------~~~~~~~~~~l~~~G~iv~~g~ 276 (344)
...+..+.+.|+|+|+++.+..
T Consensus 106 ~~~~~~~~~~l~~~~~~LkpgG~lli~~~ 134 (195)
T TIGR00477 106 FLQAGRVPEIIANMQAHTRPGGYNLIVAA 134 (195)
T ss_pred cCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 2346778888999999655543
No 418
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.11 Score=46.62 Aligned_cols=76 Identities=22% Similarity=0.216 Sum_probs=50.4
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHh---CCCcE---EEeCCCHHHHHHh-
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST---------SKKEEALSL---LGADK---FVVSSDLEQMKAL- 241 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~---------~~~~~~~~~---~g~~~---~v~~~~~~~~~~~- 241 (344)
-.+.++||+|+ +++|.+.++.+...|++|++++++. ++.+.+.++ .|... ..|-.+.+.+.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 35788999987 9999999998888999999887664 443333222 23322 2344554433221
Q ss_pred ------cCCccEEEECCCC
Q 019199 242 ------GKSLDFIIDTASG 254 (344)
Q Consensus 242 ------~~~~dvvid~~g~ 254 (344)
.+++|+++++.|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 2679999998874
No 419
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.33 E-value=0.075 Score=48.43 Aligned_cols=74 Identities=22% Similarity=0.176 Sum_probs=50.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC---cEE--EeCCCHHHHHHhcCCccEEEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA---DKF--VVSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~~--v~~~~~~~~~~~~~~~dvvid 250 (344)
.+.++||+|+ |.+|..++..+...|++|++++++.++....... .+. -.. .|..+.+.+.+...++|++|.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 4688999997 9999999999988999998887776543322111 121 111 244455555555567999999
Q ss_pred CCC
Q 019199 251 TAS 253 (344)
Q Consensus 251 ~~g 253 (344)
+++
T Consensus 84 ~A~ 86 (325)
T PLN02989 84 TAS 86 (325)
T ss_pred eCC
Confidence 887
No 420
>PRK04266 fibrillarin; Provisional
Probab=95.33 E-value=0.27 Score=42.41 Aligned_cols=127 Identities=12% Similarity=0.080 Sum_probs=71.4
Q ss_pred cCCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhC---CCcEEEeCC--CHHHHHHhcCCccEEE
Q 019199 176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLL---GADKFVVSS--DLEQMKALGKSLDFII 249 (344)
Q Consensus 176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~--~~~~~~~~~~~~dvvi 249 (344)
..+++|++||=+|+|+ |.....+++..+ .+|++++.+++.++.+.+.. ..-..+..+ ++.....+...+|+++
T Consensus 68 l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~ 146 (226)
T PRK04266 68 FPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIY 146 (226)
T ss_pred CCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEE
Confidence 3458999999998753 555666677664 48999999987665442221 111222111 1111112234599998
Q ss_pred ECCCCch----hHHHHHHhcccCCEEEEEcCC-CccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199 250 DTASGDH----PFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP 309 (344)
Q Consensus 250 d~~g~~~----~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 309 (344)
-....+. .+..+.+.|+|+|+++.. .. ...++. ....+.+++.++++.+.-++.
T Consensus 147 ~d~~~p~~~~~~L~~~~r~LKpGG~lvI~-v~~~~~d~~-----~~~~~~~~~~~~~l~~aGF~~ 205 (226)
T PRK04266 147 QDVAQPNQAEIAIDNAEFFLKDGGYLLLA-IKARSIDVT-----KDPKEIFKEEIRKLEEGGFEI 205 (226)
T ss_pred ECCCChhHHHHHHHHHHHhcCCCcEEEEE-EecccccCc-----CCHHHHHHHHHHHHHHcCCeE
Confidence 5444321 257888899999999884 11 111110 011133455667777655654
No 421
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.31 E-value=0.19 Score=44.56 Aligned_cols=95 Identities=21% Similarity=0.225 Sum_probs=72.1
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+....+..+...+.--.|.+|+|+|- ..+|.=+..++...++.|++..+....+.
T Consensus 136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~-------------------- 195 (282)
T PRK14166 136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS-------------------- 195 (282)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 467776666666666554468999999997 79999999999989999998776543332
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+. -++++++..++++|..
T Consensus 196 -~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin 231 (282)
T PRK14166 196 -LYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN 231 (282)
T ss_pred -HHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeccc
Confidence 22355899999999887433 4689999999999955
No 422
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.30 E-value=0.14 Score=42.21 Aligned_cols=32 Identities=25% Similarity=0.475 Sum_probs=27.9
Q ss_pred EEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 019199 183 SLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST 214 (344)
Q Consensus 183 ~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~ 214 (344)
+|+|+|+|++|...++.+...|. +++++|...
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 48899999999999999888999 799888764
No 423
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.29 E-value=0.11 Score=45.20 Aligned_cols=73 Identities=23% Similarity=0.215 Sum_probs=50.3
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHH-------HhcCCccE
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMK-------ALGKSLDF 247 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~-------~~~~~~dv 247 (344)
.++||+|+ |.+|...+..+...|++|++++++.++.+.+.+. .+.. ...|..+.+.+. +..+++|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 57999998 9999999999888999999999988766555332 2322 123555554332 22356899
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
+|.+.+.
T Consensus 82 vi~~a~~ 88 (255)
T TIGR01963 82 LVNNAGI 88 (255)
T ss_pred EEECCCC
Confidence 9987763
No 424
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.29 E-value=0.029 Score=48.63 Aligned_cols=100 Identities=21% Similarity=0.260 Sum_probs=60.2
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhC---CC-cEEEeCCCHHHHHHhcCCccEEEE
Q 019199 177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLL---GA-DKFVVSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~-~~~v~~~~~~~~~~~~~~~dvvid 250 (344)
..++|++||-+|+|+ |..+..+++..+ .+|+++|-+++-++.++++. +. ..-+...+.+.+.-....+|+|.-
T Consensus 44 ~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD~v~~ 122 (233)
T PF01209_consen 44 GLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFDAVTC 122 (233)
T ss_dssp T--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EEEEEE
T ss_pred CCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCceeEEEH
Confidence 348899999998764 778888888775 48999999999888775443 21 111111111112111256899987
Q ss_pred CCCC------chhHHHHHHhcccCCEEEEEcCC
Q 019199 251 TASG------DHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 251 ~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+.|- ...++++.+.|+|||+++.+.+.
T Consensus 123 ~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~ 155 (233)
T PF01209_consen 123 SFGLRNFPDRERALREMYRVLKPGGRLVILEFS 155 (233)
T ss_dssp ES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence 6652 24588999999999999888654
No 425
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.27 E-value=0.16 Score=47.49 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=50.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC-------------------chhHHHHHHhC----CCcEEEeCC--
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS-------------------TSKKEEALSLL----GADKFVVSS-- 233 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~-------------------~~~~~~~~~~~----g~~~~v~~~-- 233 (344)
.+.+|+|+|+|++|..++..+...|. ++++++.. ..|.+.+.+.+ +...+....
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 55789999999999999999999999 88888876 22333322222 212221111
Q ss_pred -CHHHHHHhcCCccEEEECCCCch
Q 019199 234 -DLEQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 234 -~~~~~~~~~~~~dvvid~~g~~~ 256 (344)
+.+...+...++|+|+|++.+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 12233344467999999999875
No 426
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.26 E-value=0.11 Score=45.70 Aligned_cols=75 Identities=21% Similarity=0.180 Sum_probs=49.7
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHhCCCc--EEEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTS---TSKKEEALSLLGAD--KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~---~~~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~~ 244 (344)
.+.++||+|+ +++|++.++.+...|++|+++.+. .++++.+.++++.. ...|-.+++.+.+. .++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999983 589999888888899999887533 34444443445532 22355555443322 267
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++++.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998863
No 427
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.26 E-value=0.12 Score=44.62 Aligned_cols=75 Identities=24% Similarity=0.263 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcEE---EeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKF---VVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~---v~~~~~~~~~~~-------~~~~ 245 (344)
++.++||+|+ |.+|...++.+...|.+|+++++++++.+.... ..+.... .|..+++.+.+. -+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3568999998 999999999988899999999998876544322 2343222 344454433221 2568
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998864
No 428
>PRK08264 short chain dehydrogenase; Validated
Probab=95.26 E-value=0.15 Score=44.08 Aligned_cols=71 Identities=21% Similarity=0.244 Sum_probs=51.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh---cCCccEEEEC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL---GKSLDFIIDT 251 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~---~~~~dvvid~ 251 (344)
.+.+++|+|+ |.+|..+++.+...|+ +|++++++.++.+. .+.. ...|..+.+.+.+. .+.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 4678999987 9999999999999999 99999988776542 3321 12344555544433 2468999998
Q ss_pred CCC
Q 019199 252 ASG 254 (344)
Q Consensus 252 ~g~ 254 (344)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 876
No 429
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.26 E-value=0.71 Score=40.04 Aligned_cols=97 Identities=18% Similarity=0.122 Sum_probs=59.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHH---HHhCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-SKKEEA---LSLLGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~-~~~~~~---~~~~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
+.++||+|+ |.+|.+.++.+...|++|+...++. ++.... .+..+... ..|..+.+.+.+. .+++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 578999998 9999999998888999987766442 322221 12334321 2344444333221 2578
Q ss_pred cEEEECCCCch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199 246 DFIIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 246 dvvid~~g~~~-------------------------~~~~~~~~l~~~G~iv~~g~~ 277 (344)
|++|.+.|... ..+.+++.++..|+++.++..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 99999887310 122334455677899988765
No 430
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=95.25 E-value=0.22 Score=44.61 Aligned_cols=95 Identities=20% Similarity=0.184 Sum_probs=72.2
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+....+..|.....--.|.+++|+|- ..+|.=+..++...|++|++..+....+.
T Consensus 146 ~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~-------------------- 205 (299)
T PLN02516 146 FLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPE-------------------- 205 (299)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 467776666766766655467999999997 79999999999999999999876533222
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+. -+.++++..++++|..
T Consensus 206 -~~~~~ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin 241 (299)
T PLN02516 206 -SIVREADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTN 241 (299)
T ss_pred -HHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeecc
Confidence 22356899999999875332 4678999999999866
No 431
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.24 E-value=0.39 Score=36.54 Aligned_cols=88 Identities=22% Similarity=0.272 Sum_probs=59.0
Q ss_pred EEEEECCChHHHHHHHHHHHC--CCeEE-EEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199 183 SLGVIGLGGLGHMAVKFGKAF--GLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD 259 (344)
Q Consensus 183 ~vlI~Gag~~G~~ai~~a~~~--g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~ 259 (344)
++.|+|+|..|.......+.. +.++. ++++++++.+.+.+++|.. . +.+.+.+-+. .++|+|+-++....-..
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~~~~~ll~~-~~~D~V~I~tp~~~h~~ 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YTDLEELLAD-EDVDAVIIATPPSSHAE 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ESSHHHHHHH-TTESEEEEESSGGGHHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hhHHHHHHHh-hcCCEEEEecCCcchHH
Confidence 578899999998887666655 44665 4566666777766788876 3 2333322221 37999999988776577
Q ss_pred HHHHhcccCCEEEEEc
Q 019199 260 AYMSLLKVAGVYVLVG 275 (344)
Q Consensus 260 ~~~~~l~~~G~iv~~g 275 (344)
.+..+++.+- -+.+.
T Consensus 78 ~~~~~l~~g~-~v~~E 92 (120)
T PF01408_consen 78 IAKKALEAGK-HVLVE 92 (120)
T ss_dssp HHHHHHHTTS-EEEEE
T ss_pred HHHHHHHcCC-EEEEE
Confidence 7777777766 44553
No 432
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.24 E-value=0.1 Score=47.91 Aligned_cols=93 Identities=20% Similarity=0.255 Sum_probs=61.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHhC----CCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~dvvid~~ 252 (344)
+...+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++ |.. +....+. .+.-.+.|+|+.++
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d~---~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARDV---HEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCCH---HHHHccCCEEEEee
Confidence 445789999999999887776664 565 8999999988877765544 432 2222332 22235689999988
Q ss_pred CCchh-HHHHHHhcccCCEEEEEcCC
Q 019199 253 SGDHP-FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 253 g~~~~-~~~~~~~l~~~G~iv~~g~~ 277 (344)
+.... +.. ..++++-.+..+|..
T Consensus 206 ~s~~p~i~~--~~l~~g~~v~~vg~d 229 (330)
T PRK08291 206 PSEEPILKA--EWLHPGLHVTAMGSD 229 (330)
T ss_pred CCCCcEecH--HHcCCCceEEeeCCC
Confidence 76431 322 347888788888764
No 433
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.24 E-value=0.12 Score=45.30 Aligned_cols=75 Identities=20% Similarity=0.286 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
.+.++||+|+ +++|...+..+...|++|++++++.++.+.+.+ ..+.+. ..|..+.+.+.+. -+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999998 999999999888899999999988776544322 223221 2355555443321 2578
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999998873
No 434
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.18 Score=44.78 Aligned_cols=74 Identities=19% Similarity=0.243 Sum_probs=50.5
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcEE---EeCCCHHHHHHh-------cCCcc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKF---VVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~---v~~~~~~~~~~~-------~~~~d 246 (344)
..++||+|+ |.+|.++++.+...|++|++++++.++.+.+.+ ..+.... .|..+.+.+.+. .+++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 457999998 999999999888899999999887766544322 2343221 244554443322 25789
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
++|.+.|.
T Consensus 90 ~vi~~Ag~ 97 (274)
T PRK07775 90 VLVSGAGD 97 (274)
T ss_pred EEEECCCc
Confidence 99998874
No 435
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.24 E-value=0.099 Score=47.58 Aligned_cols=74 Identities=22% Similarity=0.186 Sum_probs=49.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--h-CCC--c-EEE--eCCCHHHHHHhcCCccEEEE
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS--L-LGA--D-KFV--VSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~--~-~g~--~-~~v--~~~~~~~~~~~~~~~dvvid 250 (344)
.|.+|||+|+ |.+|..++..+...|.+|+++.++.++.+...+ . .+. . ..+ |..+.+.+.+...++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4689999997 999999999888889999988877654332211 1 111 1 111 33344445555567999998
Q ss_pred CCC
Q 019199 251 TAS 253 (344)
Q Consensus 251 ~~g 253 (344)
+.+
T Consensus 84 ~A~ 86 (322)
T PLN02986 84 TAS 86 (322)
T ss_pred eCC
Confidence 876
No 436
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.23 E-value=0.2 Score=44.48 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=71.3
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......+...+.--.|.+++|+|. ..+|.-+.+++...++.|++..+....+.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~-------------------- 195 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP-------------------- 195 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 467776666666665554467999999997 79999999999999999998765543322
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+ --++++++..++++|..
T Consensus 196 -~~~~~ADIvI~AvG~~~~i--~~~~vk~GavVIDvGin 231 (284)
T PRK14170 196 -QVAKEADILVVATGLAKFV--KKDYIKPGAIVIDVGMD 231 (284)
T ss_pred -HHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence 2235589999999988732 24678999999999866
No 437
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.23 E-value=0.13 Score=47.35 Aligned_cols=77 Identities=26% Similarity=0.340 Sum_probs=50.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCch---------------------hHHHH---HHhCCCcEEEeC--
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS---------------------KKEEA---LSLLGADKFVVS-- 232 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~---------------------~~~~~---~~~~g~~~~v~~-- 232 (344)
...+|+|+|+|++|..+++.+...|. ++++++...- |.+.+ .+++..+.-+..
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 34779999999999999999999999 8999987531 11111 123332211111
Q ss_pred --CCHHHHHHhcCCccEEEECCCCch
Q 019199 233 --SDLEQMKALGKSLDFIIDTASGDH 256 (344)
Q Consensus 233 --~~~~~~~~~~~~~dvvid~~g~~~ 256 (344)
-..+...++..++|+|+|++.+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 103 QDVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred ccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 123334445578999999998875
No 438
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.22 E-value=0.26 Score=41.04 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=71.1
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCccEEEEC
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDFIIDT 251 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~dvvid~ 251 (344)
+.++.+||-+|+|. |..++.+++.. +.+|+.++.+++..+.+++ ..+.. .++..+.. ....+.+|+++..
T Consensus 29 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~~---~~~~~~~D~v~~~ 104 (187)
T PRK08287 29 LHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEAP---IELPGKADAIFIG 104 (187)
T ss_pred CCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCch---hhcCcCCCEEEEC
Confidence 46888999898864 66677777765 4699999999887666533 23322 22222211 1223579999864
Q ss_pred CCC---chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199 252 ASG---DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP 309 (344)
Q Consensus 252 ~g~---~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 309 (344)
... ...+..+.+.|+++|+++..... ....+++.+++.+..+..
T Consensus 105 ~~~~~~~~~l~~~~~~Lk~gG~lv~~~~~--------------~~~~~~~~~~l~~~g~~~ 151 (187)
T PRK08287 105 GSGGNLTAIIDWSLAHLHPGGRLVLTFIL--------------LENLHSALAHLEKCGVSE 151 (187)
T ss_pred CCccCHHHHHHHHHHhcCCCeEEEEEEec--------------HhhHHHHHHHHHHCCCCc
Confidence 321 22467788999999999764211 223456777777666643
No 439
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.21 E-value=0.13 Score=45.35 Aligned_cols=75 Identities=11% Similarity=0.118 Sum_probs=48.4
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCCc--EEEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGAD--KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~~ 244 (344)
.|.++||+|+ +++|.+.++.+...|++|++..+.+. +.+.+.++.|.. ...|-.+.+.+.++ .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999983 58999999888889999998765432 233332233422 22344555443322 267
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++++.|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999998864
No 440
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.20 E-value=0.19 Score=45.44 Aligned_cols=88 Identities=17% Similarity=0.222 Sum_probs=61.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh-
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP- 257 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~- 257 (344)
-.|.+|.|+|-|.+|.+.++.++..|.+|++..+.....+.+ +..|+.. . .+.+.....|+|+-++..+.+
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A-~~~G~~v-~------sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVA-KADGFEV-M------SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHH-HHcCCEE-C------CHHHHHhcCCEEEEeCCChHHH
Confidence 467899999999999999999999999999887664444444 4567532 1 233444669999988875432
Q ss_pred --H-HHHHHhcccCCEEEEE
Q 019199 258 --F-DAYMSLLKVAGVYVLV 274 (344)
Q Consensus 258 --~-~~~~~~l~~~G~iv~~ 274 (344)
+ ...+..++++..++..
T Consensus 86 ~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHHhcCCCCCEEEEC
Confidence 2 2356667887766544
No 441
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.20 E-value=0.23 Score=44.08 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=70.2
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
..||+.......+.....--.|.+++|+|. ..+|.-...++...|+.|++..+....+.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~-------------------- 195 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK-------------------- 195 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence 467766666666665554468999999997 69999999999999999987654432221
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+ --++++++..++++|..
T Consensus 196 -~~~~~ADIvV~AvGkp~~i--~~~~vk~gavvIDvGin 231 (281)
T PRK14183 196 -AHTKKADIVIVGVGKPNLI--TEDMVKEGAIVIDIGIN 231 (281)
T ss_pred -HHHhhCCEEEEecCccccc--CHHHcCCCcEEEEeecc
Confidence 2235699999999988733 25688999999999855
No 442
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.19 E-value=0.45 Score=38.71 Aligned_cols=86 Identities=26% Similarity=0.324 Sum_probs=56.5
Q ss_pred EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYM 262 (344)
Q Consensus 183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~ 262 (344)
+|-++|.|.+|...+.-+...|.+|++.+++.++.+.+. +.|+... .+..+.. .+.|+||-++........++
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~~--~s~~e~~----~~~dvvi~~v~~~~~v~~v~ 75 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEVA--DSPAEAA----EQADVVILCVPDDDAVEAVL 75 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEEE--SSHHHHH----HHBSEEEE-SSSHHHHHHHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhhh--hhhhhHh----hcccceEeecccchhhhhhh
Confidence 577889999999999999889999999999999988884 5563322 2222222 23689998888755455544
Q ss_pred Hh------cccCCEEEEEc
Q 019199 263 SL------LKVAGVYVLVG 275 (344)
Q Consensus 263 ~~------l~~~G~iv~~g 275 (344)
.. ++++..+++++
T Consensus 76 ~~~~i~~~l~~g~iiid~s 94 (163)
T PF03446_consen 76 FGENILAGLRPGKIIIDMS 94 (163)
T ss_dssp HCTTHGGGS-TTEEEEE-S
T ss_pred hhhHHhhccccceEEEecC
Confidence 43 45555666664
No 443
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.19 E-value=0.21 Score=44.44 Aligned_cols=95 Identities=23% Similarity=0.217 Sum_probs=71.2
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHH----CCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKA----FGLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~----~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 234 (344)
.+||+....+..|.....--.|.+++|+|. ..+|.=+..++.. .+++|+...+....+...
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~-------------- 201 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEE-------------- 201 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHH--------------
Confidence 467776666666766665468999999997 7999999999887 789998887654433222
Q ss_pred HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+.+|+++-++|.+..+. -+.++++..++++|..
T Consensus 202 -------~~~ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~ 235 (286)
T PRK14184 202 -------CREADFLFVAIGRPRFVT--ADMVKPGAVVVDVGIN 235 (286)
T ss_pred -------HHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeee
Confidence 245899999999887433 3677999999999865
No 444
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.19 E-value=0.12 Score=46.59 Aligned_cols=89 Identities=13% Similarity=0.154 Sum_probs=57.9
Q ss_pred EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeC--CCHHHHHHhcCCccEEEECCCCchh
Q 019199 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVS--SDLEQMKALGKSLDFIIDTASGDHP 257 (344)
Q Consensus 183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~--~~~~~~~~~~~~~dvvid~~g~~~~ 257 (344)
++.|+|+|.+|.+.+..+...|.+|+++++++++.+.+. +.|... -... ...+..... ..+|++|-++....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~- 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALN-ENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ- 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHH-HcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence 588999999999988888888999999999877777663 445321 0000 000111222 67999999888665
Q ss_pred HHHHHHhccc----CCEEEEE
Q 019199 258 FDAYMSLLKV----AGVYVLV 274 (344)
Q Consensus 258 ~~~~~~~l~~----~G~iv~~ 274 (344)
...+++.+++ +..++.+
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 5666655543 4456554
No 445
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.18 E-value=0.12 Score=45.25 Aligned_cols=74 Identities=19% Similarity=0.095 Sum_probs=49.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCC-c---EEEeCCCHHHHHHh-------cCC
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGA-D---KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~-~---~~v~~~~~~~~~~~-------~~~ 244 (344)
+.++||+|+ |.+|.+.+..+...|++|+.++++.++.+.+.++ .+. . ...|..+.+.+... -++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467999998 9999999998888899999999887655443222 221 1 12244444333221 257
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 446
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.17 E-value=0.21 Score=44.57 Aligned_cols=95 Identities=16% Similarity=0.121 Sum_probs=72.3
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......|.....--.|.+++|+|. ..+|.-+..++...+++|++..+....+.
T Consensus 139 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~-------------------- 198 (294)
T PRK14187 139 LIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLA-------------------- 198 (294)
T ss_pred ccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHH--------------------
Confidence 457766666666766655578999999997 79999999999999999998876543332
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+ --+.++++..++++|..
T Consensus 199 -~~~~~ADIvVsAvGkp~~i--~~~~ik~gaiVIDVGin 234 (294)
T PRK14187 199 -DYCSKADILVAAVGIPNFV--KYSWIKKGAIVIDVGIN 234 (294)
T ss_pred -HHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence 2235589999999988732 25678999999999865
No 447
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.17 E-value=0.12 Score=45.46 Aligned_cols=74 Identities=24% Similarity=0.249 Sum_probs=48.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHH----hCCCc---EEEeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS-TSKKEEALS----LLGAD---KFVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~-~~~~~~~~~----~~g~~---~~v~~~~~~~~~~~-------~~ 243 (344)
.+.++||+|+ +++|.+.+..+...|++|+++.++ +++.+.+.+ ..+.. ..+|-.+++.+.+. -+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4689999998 999999999988899999887653 444433222 22322 12344555443322 25
Q ss_pred CccEEEECCC
Q 019199 244 SLDFIIDTAS 253 (344)
Q Consensus 244 ~~dvvid~~g 253 (344)
++|+++++.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 7899999875
No 448
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.15 Score=44.56 Aligned_cols=75 Identities=20% Similarity=0.080 Sum_probs=50.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HhCCCc---EEEeCCCHHHHHHh-------cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD---KFVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~--~~~g~~---~~v~~~~~~~~~~~-------~~~~d 246 (344)
.|.++||+|+ |++|...++.+...|++|+++++++++.+... +..+.. ...|..+.+.+.+. .+++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 4678999998 99999999888889999999988877652221 123322 22344444433322 25789
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
++|.+.|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999883
No 449
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.16 E-value=0.15 Score=44.68 Aligned_cols=144 Identities=15% Similarity=0.156 Sum_probs=82.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC----
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG---- 254 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~---- 254 (344)
.++.+||-+|+|. |..+..+++ .|.+|+.++.+++.++.+++.......+..+- +.+.-....+|+|+....-
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDI-ESLPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCc-ccCcCCCCcEEEEEECchhhhcC
Confidence 4678899999865 655555554 57899999999998888854433222222111 1111112469999865431
Q ss_pred --chhHHHHHHhcccCCEEEEEcCC-Cccc-cC---------CceeeeechHhHHHHHHHHHhCCCccce--EEEeCccH
Q 019199 255 --DHPFDAYMSLLKVAGVYVLVGFP-SKVK-FS---------PASLNIGGTKDTQEMLEYCAAHKIYPQI--ETIPIENV 319 (344)
Q Consensus 255 --~~~~~~~~~~l~~~G~iv~~g~~-~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~ 319 (344)
...+.++.+.|+|+|.++..... .... +. ........ .+++.+++..-.+.... -...+++.
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~~~~~~~f~~~ 194 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLP---PDAIEQALNGWRYQHHIQPITLWFDDA 194 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCCCCchHHHHHHHHHhccCCccccCCC---HHHHHHHHHhCCceeeeeEEEEECCCH
Confidence 23477888899999999877543 1110 00 00000112 33344444443343332 34578888
Q ss_pred HHHHHHHHc
Q 019199 320 NEALERLIK 328 (344)
Q Consensus 320 ~~a~~~~~~ 328 (344)
.+.++.++.
T Consensus 195 ~~~l~~lk~ 203 (251)
T PRK10258 195 LSAMRSLKG 203 (251)
T ss_pred HHHHHHHHH
Confidence 888887775
No 450
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.16 E-value=0.11 Score=40.80 Aligned_cols=91 Identities=22% Similarity=0.234 Sum_probs=53.2
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCch-------------------hHHHHH---HhC-CCcEEEeC---C
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS-------------------KKEEAL---SLL-GADKFVVS---S 233 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~-------------------~~~~~~---~~~-g~~~~v~~---~ 233 (344)
..+|+|+|+|++|..++..+-..|. +++++|...- |.+.+. +++ +...+... -
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999888899 8888885411 111111 122 22111111 1
Q ss_pred CHHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEE
Q 019199 234 DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVY 271 (344)
Q Consensus 234 ~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~i 271 (344)
+.+...+..+++|+||+|..+...-..+.+..+..++-
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p 119 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIP 119 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-E
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCC
Confidence 12333344468999999999866444444444444443
No 451
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=95.16 E-value=0.16 Score=43.91 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=62.0
Q ss_pred cCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhC---CCc--EEEeCCCHHHHHHhcCCccEE
Q 019199 176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLL---GAD--KFVVSSDLEQMKALGKSLDFI 248 (344)
Q Consensus 176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~~~~~dvv 248 (344)
..++++++||-+|+|. |..+..+++..+ .+|+.++.+++..+.+.+.+ +.+ .++..+.. ......+.+|+|
T Consensus 41 l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V 118 (231)
T TIGR02752 41 MNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAM-ELPFDDNSFDYV 118 (231)
T ss_pred cCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechh-cCCCCCCCccEE
Confidence 3447899999999863 667778887754 58999999988776664332 221 11211111 111112568998
Q ss_pred EECCC-----C-chhHHHHHHhcccCCEEEEEcC
Q 019199 249 IDTAS-----G-DHPFDAYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 249 id~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 276 (344)
+-... . ...+..+.+.|+|+|+++....
T Consensus 119 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 119 TIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred EEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 75322 1 2236778889999999987643
No 452
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.12 Score=46.82 Aligned_cols=74 Identities=30% Similarity=0.239 Sum_probs=49.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc----------hhHHHHH---HhCCCc---EEEeCCCHHHHHHh-
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----------SKKEEAL---SLLGAD---KFVVSSDLEQMKAL- 241 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~----------~~~~~~~---~~~g~~---~~v~~~~~~~~~~~- 241 (344)
.|.++||+|+ +++|.++++.+...|++|++++++. ++.+.+. +..|.. ...|-.+++.+++.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4678999998 8999999999988999999988863 3333221 233422 12344454433322
Q ss_pred ------cCCccEEEECC-C
Q 019199 242 ------GKSLDFIIDTA-S 253 (344)
Q Consensus 242 ------~~~~dvvid~~-g 253 (344)
-+++|+++++. |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 25799999987 5
No 453
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.14 E-value=0.16 Score=42.97 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=29.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~ 213 (344)
...+|+|+|+|++|...++.+...|. +++++|..
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34779999999999999999988999 79988877
No 454
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.17 Score=43.30 Aligned_cols=72 Identities=22% Similarity=0.269 Sum_probs=51.4
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh----c-CCccEEEECCCC
Q 019199 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL----G-KSLDFIIDTASG 254 (344)
Q Consensus 182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~----~-~~~dvvid~~g~ 254 (344)
.+++|+|+ |++|...++.+...|++|++++++.+..+.+ +..+.. ...|-.+.+.+.+. . .++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL-QALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH-HhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46889987 9999999988888899999999988777666 344532 33455555444332 2 468999998764
No 455
>PRK06932 glycerate dehydrogenase; Provisional
Probab=95.14 E-value=0.18 Score=45.83 Aligned_cols=104 Identities=21% Similarity=0.284 Sum_probs=70.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh-
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP- 257 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~- 257 (344)
.|.+|.|+|.|.+|...+++++.+|++|+..++.... ..... .. .+.++-...|+|.-+... +.+
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~------~~~~~----~~---~l~ell~~sDiv~l~~Plt~~T~ 212 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGAS------VCREG----YT---PFEEVLKQADIVTLHCPLTETTQ 212 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCccc------ccccc----cC---CHHHHHHhCCEEEEcCCCChHHh
Confidence 5789999999999999999999999999988754321 11100 11 233334558998877663 221
Q ss_pred ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199 258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP 309 (344)
Q Consensus 258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 309 (344)
-...++.|+++..+|.++-..-+ +-+.+++.+.+|++.-
T Consensus 213 ~li~~~~l~~mk~ga~lIN~aRG~~V-------------de~AL~~aL~~g~i~g 254 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGRGPLV-------------DEQALLDALENGKIAG 254 (314)
T ss_pred cccCHHHHHhCCCCeEEEECCCcccc-------------CHHHHHHHHHcCCccE
Confidence 24677889999999988643111 2456777788888853
No 456
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.13 E-value=0.24 Score=51.95 Aligned_cols=96 Identities=15% Similarity=0.150 Sum_probs=69.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHC-CCe-------------EEEEeCCchhHHHHHHhC-CCc-EEEeCCCHHHHHHhcC
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAF-GLN-------------VTVLSTSTSKKEEALSLL-GAD-KFVVSSDLEQMKALGK 243 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~-g~~-------------V~~~~~~~~~~~~~~~~~-g~~-~~v~~~~~~~~~~~~~ 243 (344)
...+|+|+|+|.+|...+..+... +++ |++.+.+.++.+.+.+.+ +.+ ..+|..+.+.+.+...
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 466899999999999988888653 334 788888877777665555 432 3556677776666556
Q ss_pred CccEEEECCCCchhHHHHHHhcccCCEEEEEc
Q 019199 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG 275 (344)
Q Consensus 244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g 275 (344)
++|+|+.+++.......+..+++.+-.++...
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek 679 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTAS 679 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEECc
Confidence 69999999997655677777777776665553
No 457
>PRK09135 pteridine reductase; Provisional
Probab=95.13 E-value=0.15 Score=44.22 Aligned_cols=74 Identities=18% Similarity=0.152 Sum_probs=48.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHH---hC-CCc---EEEeCCCHHHHHHh-------cC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALS---LL-GAD---KFVVSSDLEQMKAL-------GK 243 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~---~~-g~~---~~v~~~~~~~~~~~-------~~ 243 (344)
.+.++||+|+ |.+|..++..+...|++|++++++.+ +.+...+ .. +.. ...|..+.+.+.+. .+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999998 99999999988889999999988643 3332211 11 111 22344554443322 25
Q ss_pred CccEEEECCC
Q 019199 244 SLDFIIDTAS 253 (344)
Q Consensus 244 ~~dvvid~~g 253 (344)
++|++|.+.|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 458
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.12 E-value=0.16 Score=46.88 Aligned_cols=75 Identities=20% Similarity=0.172 Sum_probs=51.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--CCc-EEE--eCCCHHHHHHhcCCccEEEECC
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--GAD-KFV--VSSDLEQMKALGKSLDFIIDTA 252 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~~v--~~~~~~~~~~~~~~~dvvid~~ 252 (344)
..+.+|||+|+ |.+|..+++.+...|.+|++++++.++...+...+ +.. ..+ |..+.+.+.+...++|+||.+.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 56778999997 99999999999889999999888766544332222 111 112 3344555555556789999877
Q ss_pred C
Q 019199 253 S 253 (344)
Q Consensus 253 g 253 (344)
+
T Consensus 88 ~ 88 (353)
T PLN02896 88 A 88 (353)
T ss_pred c
Confidence 6
No 459
>PRK08328 hypothetical protein; Provisional
Probab=95.12 E-value=0.26 Score=42.73 Aligned_cols=93 Identities=19% Similarity=0.250 Sum_probs=55.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH-----------------------HHhCCCcEEEeCC--
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA-----------------------LSLLGADKFVVSS-- 233 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~-----------------------~~~~g~~~~v~~~-- 233 (344)
.+.+|+|+|+|++|..++..+...|. +++++|...-+...+ .+++..+..++..
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~ 105 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG 105 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence 34779999999999999999999998 888887443221111 1222222112111
Q ss_pred --CHHHHHHhcCCccEEEECCCCchhHHHHHH--hcccCCEEEE
Q 019199 234 --DLEQMKALGKSLDFIIDTASGDHPFDAYMS--LLKVAGVYVL 273 (344)
Q Consensus 234 --~~~~~~~~~~~~dvvid~~g~~~~~~~~~~--~l~~~G~iv~ 273 (344)
..+...+.-+++|+|+|++.+.. .+..+. +.+.+=.++.
T Consensus 106 ~~~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~~~~~~~~ip~i~ 148 (231)
T PRK08328 106 RLSEENIDEVLKGVDVIVDCLDNFE-TRYLLDDYAHKKGIPLVH 148 (231)
T ss_pred cCCHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEE
Confidence 12223333467999999999866 455555 3344433443
No 460
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.10 E-value=0.23 Score=44.15 Aligned_cols=95 Identities=14% Similarity=0.209 Sum_probs=70.5
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......+.....--.|.+++|+|. ..+|.=+..++...++.|++..+....+.
T Consensus 138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~-------------------- 197 (288)
T PRK14171 138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLS-------------------- 197 (288)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 466666666666665554468999999997 79999999999999999998775543332
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+. -++++++..++++|..
T Consensus 198 -~~~~~ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin 233 (288)
T PRK14171 198 -SITSKADIVVAAIGSPLKLT--AEYFNPESIVIDVGIN 233 (288)
T ss_pred -HHHhhCCEEEEccCCCCccC--HHHcCCCCEEEEeecc
Confidence 22355899999999876332 4688999999999855
No 461
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.08 E-value=0.11 Score=45.01 Aligned_cols=74 Identities=24% Similarity=0.298 Sum_probs=49.3
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199 181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL 245 (344)
Q Consensus 181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~ 245 (344)
+.++||+|+ |.+|...+..+...|++|+++ +++.++.+.+.+. .+... ..|..+.+.+.+. .+++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999987 999999998888889999988 8877665443222 22221 1244444433322 1479
Q ss_pred cEEEECCCC
Q 019199 246 DFIIDTASG 254 (344)
Q Consensus 246 dvvid~~g~ 254 (344)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 462
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.08 E-value=0.71 Score=39.94 Aligned_cols=33 Identities=27% Similarity=0.503 Sum_probs=28.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS 213 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~ 213 (344)
+.+|+|+|+|++|..++..+-..|. ++++++..
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3679999999999999999988998 88888855
No 463
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.08 E-value=0.25 Score=44.12 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=71.0
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAF----GLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~----g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 234 (344)
.+||+.......|.....--.|.+|+|+|. ..+|.=+..++... ++.|++..+....+.
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~---------------- 199 (293)
T PRK14185 136 FVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLK---------------- 199 (293)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHH----------------
Confidence 467776666666666555468999999997 79999988888876 688888765543322
Q ss_pred HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+. -++++++..++++|..
T Consensus 200 -----~~~~~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin 235 (293)
T PRK14185 200 -----KECLEADIIIAALGQPEFVK--ADMVKEGAVVIDVGTT 235 (293)
T ss_pred -----HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecCc
Confidence 22345899999999887443 4789999999999875
No 464
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=95.07 E-value=0.44 Score=42.17 Aligned_cols=99 Identities=17% Similarity=0.158 Sum_probs=60.9
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---hCCCcEE-EeCCCHHHHHHhcCCccEEE-E
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALS---LLGADKF-VVSSDLEQMKALGKSLDFII-D 250 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~-v~~~~~~~~~~~~~~~dvvi-d 250 (344)
+++|++||-.|+|+ |..++.+++.++ .+|++++.++++++.+.+ ..|...+ +...+........+.+|.|+ |
T Consensus 69 ~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~fD~Vl~D 147 (264)
T TIGR00446 69 PDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFGAAVPKFDAILLD 147 (264)
T ss_pred CCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhhhhccCCCEEEEc
Confidence 37899999888754 444555565553 389999999998765533 3454321 22223222222234699986 4
Q ss_pred --CCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199 251 --TASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 251 --~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
|+|.. ..+..+++.++++|+++....+
T Consensus 148 ~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYstcs 201 (264)
T TIGR00446 148 APCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYSTCS 201 (264)
T ss_pred CCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 33321 1466788899999999866443
No 465
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.07 E-value=0.12 Score=47.74 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=50.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC----Cc-EEEeCCCHHHHHHhc--CCccEEEEC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG----AD-KFVVSSDLEQMKALG--KSLDFIIDT 251 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~-~~v~~~~~~~~~~~~--~~~dvvid~ 251 (344)
.|.++||+|+ |.+|..+++.+...|.+|++++++........+.++ .. ...|-.+.+.+.+.. .++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 3678999997 999999999999999999999877664332212222 11 122444555554443 257999998
Q ss_pred CCC
Q 019199 252 ASG 254 (344)
Q Consensus 252 ~g~ 254 (344)
.+.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 873
No 466
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.06 E-value=0.15 Score=44.37 Aligned_cols=82 Identities=26% Similarity=0.368 Sum_probs=50.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhH-------------------HHH---HHhCCCcEEEeC----C
Q 019199 181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKK-------------------EEA---LSLLGADKFVVS----S 233 (344)
Q Consensus 181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~-------------------~~~---~~~~g~~~~v~~----~ 233 (344)
+.+|+|+|+|++|..+++.+...|. +++++|...-+. +.+ .+++..+.-+.. -
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i 103 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL 103 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 4789999999999999999999998 888877553221 111 112221111111 1
Q ss_pred CHHHHHHhcCCccEEEECCCCchhHHHHHH
Q 019199 234 DLEQMKALGKSLDFIIDTASGDHPFDAYMS 263 (344)
Q Consensus 234 ~~~~~~~~~~~~dvvid~~g~~~~~~~~~~ 263 (344)
+.+...+.-.++|+|+|+..+.. .+..+.
T Consensus 104 ~~~~~~~~~~~~DlVvd~~D~~~-~r~~ln 132 (240)
T TIGR02355 104 DDAELAALIAEHDIVVDCTDNVE-VRNQLN 132 (240)
T ss_pred CHHHHHHHhhcCCEEEEcCCCHH-HHHHHH
Confidence 12233444468999999999877 444443
No 467
>PRK12744 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.46 Score=41.58 Aligned_cols=75 Identities=20% Similarity=0.198 Sum_probs=47.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc----hhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----SKKEEAL---SLLGADK---FVVSSDLEQMKAL------- 241 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~----~~~~~~~---~~~g~~~---~v~~~~~~~~~~~------- 241 (344)
.+.++||+|+ |++|.+.++.+...|++|++++++. +..+.+. +..+... .+|..+.+.+.+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 4678999997 9999999999988999977665432 2222221 2234321 2344555443322
Q ss_pred cCCccEEEECCCC
Q 019199 242 GKSLDFIIDTASG 254 (344)
Q Consensus 242 ~~~~dvvid~~g~ 254 (344)
.+++|++|.+.|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 2578999998874
No 468
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.12 Score=45.69 Aligned_cols=72 Identities=25% Similarity=0.299 Sum_probs=49.4
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~dvv 248 (344)
++||+|+ |++|...+..+...|++|++++++.++.+.+.++ .+.+. ..|..+.+.+.+. .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899988 9999999988888999999999888765544222 23222 2233444333221 2579999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
|.+.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 998874
No 469
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.04 E-value=0.33 Score=44.15 Aligned_cols=93 Identities=26% Similarity=0.238 Sum_probs=61.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHH-HCCC-eEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGK-AFGL-NVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~-~~g~-~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~dvvid~~g 253 (344)
....+++|+|+|..|.+.+..+. ..+. +|++..++.++.+.+.+++ |... ....+. .+...++|+|+.+++
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~-~~~~~~---~~av~~aDIVi~aT~ 198 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDA-EVVTDL---EAAVRQADIISCATL 198 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCce-EEeCCH---HHHHhcCCEEEEeeC
Confidence 56788999999999998876444 3565 8999999988877765555 3221 112222 222357999998887
Q ss_pred Cchh-HHHHHHhcccCCEEEEEcCC
Q 019199 254 GDHP-FDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 254 ~~~~-~~~~~~~l~~~G~iv~~g~~ 277 (344)
.... +. -+.++++-.+..+|..
T Consensus 199 s~~pvl~--~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 199 STEPLVR--GEWLKPGTHLDLVGNF 221 (314)
T ss_pred CCCCEec--HHHcCCCCEEEeeCCC
Confidence 6532 22 2567888877777754
No 470
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.04 E-value=0.08 Score=53.34 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=52.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHHHhCCCcEEEeCCC-HH
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS---------------------KKEEALSLLGADKFVVSSD-LE 236 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~---------------------~~~~~~~~~g~~~~v~~~~-~~ 236 (344)
..+.+|+|+|+|..|++++..+...|.+|+++++.+. +.+.+ +++|.+...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIF-SAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHH-HHCCeEEECCCEeCCc
Confidence 3588999999999999999999999999999987542 23344 5677554332210 00
Q ss_pred -HHHHhcCCccEEEECCCCc
Q 019199 237 -QMKALGKSLDFIIDTASGD 255 (344)
Q Consensus 237 -~~~~~~~~~dvvid~~g~~ 255 (344)
.+.....++|.+|.++|..
T Consensus 404 i~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CCHHHHHhcCCEEEEeCCCC
Confidence 1122224699999988853
No 471
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.03 E-value=0.27 Score=43.64 Aligned_cols=95 Identities=17% Similarity=0.168 Sum_probs=70.9
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......+.....--.|.+++|+|- ..+|.-+..++...+++|++..+....+.
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~-------------------- 195 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA-------------------- 195 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence 367766666666665554468999999997 79999999999999999998765543322
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+. -+.++++..++++|..
T Consensus 196 -~~~~~ADIvI~AvGk~~~i~--~~~ik~gaiVIDvGin 231 (282)
T PRK14182 196 -GEVGRADILVAAIGKAELVK--GAWVKEGAVVIDVGMN 231 (282)
T ss_pred -HHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEeece
Confidence 22355899999999876332 4678999999999865
No 472
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.02 E-value=0.33 Score=42.09 Aligned_cols=101 Identities=20% Similarity=0.200 Sum_probs=68.5
Q ss_pred cCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHHHHh-cCCccEEE
Q 019199 176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKAL-GKSLDFII 249 (344)
Q Consensus 176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~-~~~~dvvi 249 (344)
..+.+|++|+=.|.|+ |.++.-+|+..|. +|+.....++..+.|++.+ |....+.....+..+.. ...+|.+|
T Consensus 90 ~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vDav~ 168 (256)
T COG2519 90 LGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVDAVF 168 (256)
T ss_pred cCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccCEEE
Confidence 3449999999988753 7788888888775 8999999988776665443 43221222111111111 24788875
Q ss_pred -ECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 250 -DTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 250 -d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
|...-...++.+.+.|+|+|+++.+..+
T Consensus 169 LDmp~PW~~le~~~~~Lkpgg~~~~y~P~ 197 (256)
T COG2519 169 LDLPDPWNVLEHVSDALKPGGVVVVYSPT 197 (256)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence 6555556689999999999999998543
No 473
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=95.02 E-value=0.091 Score=46.85 Aligned_cols=71 Identities=18% Similarity=0.195 Sum_probs=49.2
Q ss_pred EEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC----C---c-E----EEeCCCHHHHHHhcC--CccE
Q 019199 184 LGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG----A---D-K----FVVSSDLEQMKALGK--SLDF 247 (344)
Q Consensus 184 vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g----~---~-~----~v~~~~~~~~~~~~~--~~dv 247 (344)
|||+|+ |++|...++.+...+. +++++++++..+..+.+++. . . . +-|.++.+.+.++-. ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 789987 9999999988888887 89999999999888877772 1 1 1 114456666666654 8999
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
||.++.-
T Consensus 81 VfHaAA~ 87 (293)
T PF02719_consen 81 VFHAAAL 87 (293)
T ss_dssp EEE----
T ss_pred EEEChhc
Confidence 9998864
No 474
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.97 E-value=0.3 Score=44.22 Aligned_cols=38 Identities=26% Similarity=0.247 Sum_probs=31.1
Q ss_pred CCCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCchhH
Q 019199 179 QPGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTSKK 217 (344)
Q Consensus 179 ~~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~~~ 217 (344)
-.|.++||+|+ .++|.+.++.+...|++|++ .+..+++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 35789999988 79999999999999999988 5554443
No 475
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.97 E-value=0.08 Score=46.90 Aligned_cols=102 Identities=25% Similarity=0.194 Sum_probs=72.9
Q ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-----------HHHH-----
Q 019199 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-----------LEQM----- 238 (344)
Q Consensus 175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-----------~~~~----- 238 (344)
++...++.++++.|.|..|+.++..++..|+-|+..+....+.+.- +.+|+...-..+. .++.
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv-~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQV-ESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhh-hhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3334677889999999999999999999999999988888877766 5777543211111 1111
Q ss_pred --HHhcCCccEEEECCCCc------hhHHHHHHhcccCCEEEEEcCC
Q 019199 239 --KALGKSLDFIIDTASGD------HPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 --~~~~~~~dvvid~~g~~------~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
.+...++|+||-+.--| .....+...++|+..+|++...
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~ 283 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAE 283 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhh
Confidence 12247899999876322 1256788899999999988643
No 476
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.57 Score=39.19 Aligned_cols=60 Identities=25% Similarity=0.257 Sum_probs=40.5
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---cCCccEEEECCCC
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSLDFIIDTASG 254 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~dvvid~~g~ 254 (344)
++||+|+ |++|.+.+..+... .+|++++++.+ ....|-.+.+.+++. .+++|+++.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence 5889987 99999888777666 89999887653 112344444443332 2468888887774
No 477
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.96 E-value=0.16 Score=46.10 Aligned_cols=99 Identities=22% Similarity=0.207 Sum_probs=67.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC----Cc----EEEeCCCHHHHHHh-------c
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG----AD----KFVVSSDLEQMKAL-------G 242 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~----~~v~~~~~~~~~~~-------~ 242 (344)
-.|.+++|+|+ +++|..++..+...|++|+..+++.++.+.+.++.. .. ..+|-.+...+++. .
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 45678889998 999999999999999999999999987766654443 12 23344555444332 3
Q ss_pred CCccEEEECCCCc-----------------------hhHHHHHHhcccC--CEEEEEcCC
Q 019199 243 KSLDFIIDTASGD-----------------------HPFDAYMSLLKVA--GVYVLVGFP 277 (344)
Q Consensus 243 ~~~dvvid~~g~~-----------------------~~~~~~~~~l~~~--G~iv~~g~~ 277 (344)
...|+.+++.|-- ...+.++..|+.. +|||.++..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~ 172 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI 172 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence 5788888877631 1234455555544 799988753
No 478
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.21 Score=43.74 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=49.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHH---HhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEAL---SLLGAD---KFVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~---~~~g~~---~~v~~~~~~~~~~~-------~~~ 244 (344)
.+.++||+|+ +++|.++++.+...|++|++++++++ ..+.+. +..+.. ...|-.+++.+.+. .++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 99999999999989999999988654 222221 223422 12244444433321 267
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|++|++.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 479
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.92 E-value=0.35 Score=43.09 Aligned_cols=92 Identities=21% Similarity=0.314 Sum_probs=63.3
Q ss_pred CEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCc---------EEEeCCCHHHHHHhcCCccEEE-E
Q 019199 182 KSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD---------KFVVSSDLEQMKALGKSLDFII-D 250 (344)
Q Consensus 182 ~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~---------~~v~~~~~~~~~~~~~~~dvvi-d 250 (344)
.+|||+|.| -|-.+-.+++.... ++++++-+++=.+.+++.++.. .++..+....+++...++|++| |
T Consensus 78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 589999854 35556677777766 8999998888888887667632 1222222345555556899986 4
Q ss_pred CCCC---------chhHHHHHHhcccCCEEEEE
Q 019199 251 TASG---------DHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 251 ~~g~---------~~~~~~~~~~l~~~G~iv~~ 274 (344)
+... ..-++..-++|+++|.++.-
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 4432 34477888999999999866
No 480
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.91 E-value=0.22 Score=44.53 Aligned_cols=88 Identities=24% Similarity=0.197 Sum_probs=57.2
Q ss_pred EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh---HH
Q 019199 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP---FD 259 (344)
Q Consensus 183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~---~~ 259 (344)
+|.|+|.|.+|...+..++..|.+|++.+++++..+.+ .+.|...... .+.+ ...++|+||.++..... +.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a-~~~g~~~~~~-~~~~----~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERA-IERGLVDEAS-TDLS----LLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCccccc-CCHh----HhcCCCEEEEcCCHHHHHHHHH
Confidence 57889999999998888888899999999998888777 4556321111 1111 12568999988875441 22
Q ss_pred HHHHhcccCCEEEEEcC
Q 019199 260 AYMSLLKVAGVYVLVGF 276 (344)
Q Consensus 260 ~~~~~l~~~G~iv~~g~ 276 (344)
.+...++++..+++++.
T Consensus 76 ~l~~~l~~~~ii~d~~S 92 (279)
T PRK07417 76 QLIPALPPEAIVTDVGS 92 (279)
T ss_pred HHHHhCCCCcEEEeCcc
Confidence 33334455555555543
No 481
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.91 E-value=0.27 Score=43.98 Aligned_cols=95 Identities=18% Similarity=0.176 Sum_probs=70.0
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAF----GLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~----g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 234 (344)
..||+.......|.....--.|.+|+|+|. ..+|.=+.+++... ++.|++..+....+.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~---------------- 199 (297)
T PRK14167 136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLA---------------- 199 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHH----------------
Confidence 457766666666665554468999999997 79999988888766 788888765443222
Q ss_pred HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+. -++++++..++++|..
T Consensus 200 -----~~~~~ADIvIsAvGkp~~i~--~~~ik~gaiVIDvGin 235 (297)
T PRK14167 200 -----AKTRRADIVVAAAGVPELID--GSMLSEGATVIDVGIN 235 (297)
T ss_pred -----HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence 22356999999999887333 3789999999999965
No 482
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=94.90 E-value=0.27 Score=47.50 Aligned_cols=81 Identities=11% Similarity=0.170 Sum_probs=55.4
Q ss_pred HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199 171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250 (344)
Q Consensus 171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid 250 (344)
++.+...--.+.+++|+|+|++|.+++..+...|++|++..++.++.+.+.+.++.. .++..+ ... ..++|++++
T Consensus 322 ~l~~~~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~~---~~~-l~~~DiVIn 396 (477)
T PRK09310 322 LLKQKNIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLES---LPE-LHRIDIIIN 396 (477)
T ss_pred HHHhcCCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechhH---hcc-cCCCCEEEE
Confidence 444333223577899999999999999999999999999998888776665555432 122111 111 246999999
Q ss_pred CCCCch
Q 019199 251 TASGDH 256 (344)
Q Consensus 251 ~~g~~~ 256 (344)
|+....
T Consensus 397 atP~g~ 402 (477)
T PRK09310 397 CLPPSV 402 (477)
T ss_pred cCCCCC
Confidence 987543
No 483
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=94.90 E-value=0.23 Score=45.24 Aligned_cols=95 Identities=21% Similarity=0.200 Sum_probs=71.9
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM 238 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 238 (344)
.+||+.......|.....--.|.+++|+|- ..+|.=+..++...++.|++..+....+.
T Consensus 193 ~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~-------------------- 252 (345)
T PLN02897 193 FVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPE-------------------- 252 (345)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHH--------------------
Confidence 467766666666665554467999999996 79999999999999999988875543222
Q ss_pred HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+ --++++++..+|++|..
T Consensus 253 -~~~~~ADIvIsAvGkp~~v--~~d~vk~GavVIDVGin 288 (345)
T PLN02897 253 -QITRKADIVIAAAGIPNLV--RGSWLKPGAVVIDVGTT 288 (345)
T ss_pred -HHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEcccc
Confidence 2335699999999988732 35789999999999866
No 484
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.21 Score=43.83 Aligned_cols=75 Identities=20% Similarity=0.219 Sum_probs=49.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HhCCCc---EEEeCCCHHHHHHh-------cCCcc
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD---KFVVSSDLEQMKAL-------GKSLD 246 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~--~~~g~~---~~v~~~~~~~~~~~-------~~~~d 246 (344)
.+.+++|+|+ |++|.+.+..+...|++|++++++++..+.+. +..+.. ...|..+.+.+.+. .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999987 99999999999889999999988765322221 122322 12344444433322 25789
Q ss_pred EEEECCCC
Q 019199 247 FIIDTASG 254 (344)
Q Consensus 247 vvid~~g~ 254 (344)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99998873
No 485
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.87 E-value=0.18 Score=43.84 Aligned_cols=42 Identities=24% Similarity=0.274 Sum_probs=35.6
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 019199 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA 220 (344)
Q Consensus 179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~ 220 (344)
.++.++||+|+ |.+|...++.+...|++|++++++.++.+.+
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~ 52 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAV 52 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Confidence 57889999988 9999999988888899999999987765443
No 486
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.87 E-value=0.14 Score=50.04 Aligned_cols=71 Identities=25% Similarity=0.309 Sum_probs=51.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g 253 (344)
.+.+++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+.. .......|+++++++
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~~--~~~~~~~diiINtT~ 448 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLADLE--NFHPEEGMILANTTS 448 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHhh--hhccccCeEEEeccc
Confidence 467899999999999999999999999999999888877776666532 22222111 111235789998775
No 487
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=94.86 E-value=0.2 Score=43.88 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=34.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS 215 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~ 215 (344)
.|-.+++|.|+|.++++++++|+.+|.+|++++.+++
T Consensus 98 ~p~~~L~IfGaG~va~~la~la~~lGf~V~v~D~R~~ 134 (246)
T TIGR02964 98 PPAPHVVLFGAGHVGRALVRALAPLPCRVTWVDSREA 134 (246)
T ss_pred CCCCEEEEECCcHHHHHHHHHHhcCCCEEEEEeCCcc
Confidence 5678899999999999999999999999999998766
No 488
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.86 E-value=0.16 Score=44.15 Aligned_cols=75 Identities=25% Similarity=0.308 Sum_probs=48.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEAL---SLLGADK---FVVSSDLEQMKAL-------GKS 244 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~~ 244 (344)
++.++||+|+ |++|...+..+...|++|++. .++.++.+.+. +..+... ..|..+++.+.+. .++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998 999999999999999988764 55555543332 2234322 1344454443322 257
Q ss_pred ccEEEECCCC
Q 019199 245 LDFIIDTASG 254 (344)
Q Consensus 245 ~dvvid~~g~ 254 (344)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 489
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.86 E-value=0.33 Score=43.24 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=70.1
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAF----GLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~----g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~ 234 (344)
.+||+....+..|.....--.|.+|+|+|- ..+|.=+..++... ++.|++..+....+.
T Consensus 132 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~---------------- 195 (287)
T PRK14181 132 FIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLT---------------- 195 (287)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHH----------------
Confidence 467766666666666554467999999997 79999999999887 788887664433222
Q ss_pred HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+ --+.++++..++++|..
T Consensus 196 -----~~~~~ADIvV~AvG~p~~i--~~~~ik~GavVIDvGin 231 (287)
T PRK14181 196 -----EILKTADIIIAAIGVPLFI--KEEMIAEKAVIVDVGTS 231 (287)
T ss_pred -----HHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence 2235589999999988633 25688999999999865
No 490
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.84 E-value=0.27 Score=47.60 Aligned_cols=71 Identities=23% Similarity=0.232 Sum_probs=49.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSK-----KEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS 253 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~-----~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g 253 (344)
..+.+|+|+|+|.+|+.++.+++..|.+|++++..+.. .+.+ ++.|........ .. ...++|+|+-+.|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l-~~~gv~~~~~~~-~~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAIL-EALGATVRLGPG-PT----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHH-HHcCCEEEECCC-cc----ccCCCCEEEECCC
Confidence 35678999999999999999999999999999866531 1223 456755433222 11 2245888888877
Q ss_pred Cc
Q 019199 254 GD 255 (344)
Q Consensus 254 ~~ 255 (344)
.+
T Consensus 88 i~ 89 (480)
T PRK01438 88 WR 89 (480)
T ss_pred cC
Confidence 54
No 491
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.84 E-value=0.42 Score=42.01 Aligned_cols=92 Identities=15% Similarity=0.226 Sum_probs=62.8
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC---
Q 019199 178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS--- 253 (344)
Q Consensus 178 ~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g--- 253 (344)
..++++||-+|+|. |..+..+++.. +.+|+.++.+++..+.++ +.+.+.+ .. +...+. ..+.+|+|+....
T Consensus 27 ~~~~~~vLDlGcG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~~-~~-d~~~~~-~~~~fD~v~~~~~l~~ 101 (255)
T PRK14103 27 AERARRVVDLGCGP-GNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDAR-TG-DVRDWK-PKPDTDVVVSNAALQW 101 (255)
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcEE-Ec-ChhhCC-CCCCceEEEEehhhhh
Confidence 37889999999864 66777777765 679999999998888773 4454322 22 211111 1357999986443
Q ss_pred --C-chhHHHHHHhcccCCEEEEE
Q 019199 254 --G-DHPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 254 --~-~~~~~~~~~~l~~~G~iv~~ 274 (344)
. ...+..+.+.|+|+|+++..
T Consensus 102 ~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 102 VPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCCHHHHHHHHHHhCCCCcEEEEE
Confidence 1 23467888899999999865
No 492
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.31 Score=43.22 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=49.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-------HHHH---HHhCCCcE---EEeCCCHHHHHHh----
Q 019199 180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-------KEEA---LSLLGADK---FVVSSDLEQMKAL---- 241 (344)
Q Consensus 180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-------~~~~---~~~~g~~~---~v~~~~~~~~~~~---- 241 (344)
.+.++||+|+ |++|...+..+...|++|++++++.+. ++.+ .+..+... ..|..+.+.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4578999998 999999999888899999999987542 2111 12334322 2355555443322
Q ss_pred ---cCCccEEEECCCC
Q 019199 242 ---GKSLDFIIDTASG 254 (344)
Q Consensus 242 ---~~~~dvvid~~g~ 254 (344)
-+++|++|++.|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 1579999998874
No 493
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.81 E-value=0.18 Score=48.26 Aligned_cols=71 Identities=25% Similarity=0.351 Sum_probs=49.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch-hH----HHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KK----EEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG 254 (344)
Q Consensus 180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~-~~----~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~ 254 (344)
.+.+|+|+|+|.+|+.++..+...|++|++++.... .. +.+ ++.|.. ++..+..+ +..+++|+|+.+.|.
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEEL-GELGIE-LVLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH-HhcCCE-EEeCCcch---hHhhcCCEEEECCCC
Confidence 468899999988999999999999999999998752 22 222 344544 22222222 223569999998885
Q ss_pred c
Q 019199 255 D 255 (344)
Q Consensus 255 ~ 255 (344)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 4
No 494
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.78 E-value=0.33 Score=43.15 Aligned_cols=95 Identities=22% Similarity=0.229 Sum_probs=70.0
Q ss_pred ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHH--CCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH
Q 019199 160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKA--FGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE 236 (344)
Q Consensus 160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~--~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 236 (344)
.+||+....+..+...+.--.|.+++|+|. ..+|.-+..++.. .++.|++..+....+.
T Consensus 137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~------------------ 198 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLA------------------ 198 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHH------------------
Confidence 467776666666665554357999999997 8999998888877 7899988875433222
Q ss_pred HHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199 237 QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277 (344)
Q Consensus 237 ~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 277 (344)
+..+.+|+++-++|.+..+ --+.++++..++++|..
T Consensus 199 ---~~~k~ADIvV~AvGkp~~i--~~~~ik~GavVIDvGin 234 (284)
T PRK14193 199 ---AHTRRADIIVAAAGVAHLV--TADMVKPGAAVLDVGVS 234 (284)
T ss_pred ---HHHHhCCEEEEecCCcCcc--CHHHcCCCCEEEEcccc
Confidence 2235589999999988632 25678999999999865
No 495
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.78 E-value=0.24 Score=47.87 Aligned_cols=73 Identities=14% Similarity=0.249 Sum_probs=49.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD 255 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~ 255 (344)
-.+.+|+|+|.|+.|.+++.+++..|++|++.++...+...+.+++|.......+..+.+ .++|+|+-+.|-+
T Consensus 13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi~ 85 (473)
T PRK00141 13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGWR 85 (473)
T ss_pred ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCCC
Confidence 456789999999999999999999999999999765544333345665433222223222 3577777766643
No 496
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.76 E-value=0.18 Score=43.97 Aligned_cols=72 Identities=19% Similarity=0.154 Sum_probs=49.6
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSLDFI 248 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~dvv 248 (344)
+++|+|+ |++|...++.+...|++|+.+.+++++.+.+.+ ..+... ..|-.+++.+.+. .+.+|++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 81 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM 81 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899987 999999999998899999999988765544322 234221 2344555443332 2568999
Q ss_pred EECCCC
Q 019199 249 IDTASG 254 (344)
Q Consensus 249 id~~g~ 254 (344)
|.+.|.
T Consensus 82 i~~ag~ 87 (254)
T TIGR02415 82 VNNAGV 87 (254)
T ss_pred EECCCc
Confidence 998874
No 497
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.76 E-value=0.13 Score=41.64 Aligned_cols=76 Identities=25% Similarity=0.261 Sum_probs=56.1
Q ss_pred CCCEEEEEC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH----HHHHh------cCCccEE
Q 019199 180 PGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE----QMKAL------GKSLDFI 248 (344)
Q Consensus 180 ~g~~vlI~G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~----~~~~~------~~~~dvv 248 (344)
+|-.-||.| ++++|.++...+...|+.|+..+....+-+...+++|...++.+.+.. ....+ -+..|+.
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 445557775 599999999999999999999998888766666899988777665432 11111 1568999
Q ss_pred EECCCCc
Q 019199 249 IDTASGD 255 (344)
Q Consensus 249 id~~g~~ 255 (344)
++|.|..
T Consensus 88 vncagia 94 (260)
T KOG1199|consen 88 VNCAGIA 94 (260)
T ss_pred eecccee
Confidence 9998854
No 498
>PRK05599 hypothetical protein; Provisional
Probab=94.76 E-value=0.16 Score=44.37 Aligned_cols=71 Identities=14% Similarity=0.123 Sum_probs=48.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc----EEEeCCCHHHHHH-------hcCCccE
Q 019199 183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD----KFVVSSDLEQMKA-------LGKSLDF 247 (344)
Q Consensus 183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~----~~v~~~~~~~~~~-------~~~~~dv 247 (344)
+++|+|+ +++|.+.+..+. .|++|+++++++++.+.+.++ .|.+ ..+|-.+.+.+.+ ..+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 5889987 899999887766 499999999988877655333 2322 1234455443332 1367999
Q ss_pred EEECCCC
Q 019199 248 IIDTASG 254 (344)
Q Consensus 248 vid~~g~ 254 (344)
++++.|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9988874
No 499
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=94.76 E-value=0.13 Score=40.52 Aligned_cols=83 Identities=17% Similarity=0.269 Sum_probs=45.0
Q ss_pred EEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhc-CCccEEEECCCCchhHHHHH
Q 019199 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALG-KSLDFIIDTASGDHPFDAYM 262 (344)
Q Consensus 184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~-~~~dvvid~~g~~~~~~~~~ 262 (344)
++|.|+|.++.+.+++++.+|.+|++++..+++.. .++.+......+...... ..-++|+=+-++..-...+.
T Consensus 1 L~I~GaG~va~al~~la~~lg~~v~v~d~r~e~~~------~~~~~~~~~~~~~~~~~~~~~~t~Vv~th~h~~D~~~L~ 74 (136)
T PF13478_consen 1 LVIFGAGHVARALARLAALLGFRVTVVDPRPERFP------EADEVICIPPDDILEDLEIDPNTAVVMTHDHELDAEALE 74 (136)
T ss_dssp EEEES-STCHHHHHHHHHHCTEEEEEEES-CCC-T------TSSEEECSHHHHHHHHC-S-TT-EEE--S-CCCHHHHHH
T ss_pred CEEEeCcHHHHHHHHHHHhCCCEEEEEcCCccccC------CCCccEecChHHHHhccCCCCCeEEEEcCCchhHHHHHH
Confidence 46789999999999999999999999999877442 344443322222223322 22334453444433244455
Q ss_pred HhcccCCEEE
Q 019199 263 SLLKVAGVYV 272 (344)
Q Consensus 263 ~~l~~~G~iv 272 (344)
..++..-+++
T Consensus 75 ~~l~~~~~Yi 84 (136)
T PF13478_consen 75 AALASPARYI 84 (136)
T ss_dssp HHTTSS-SEE
T ss_pred HHHcCCCCEE
Confidence 5555543333
No 500
>PRK03612 spermidine synthase; Provisional
Probab=94.75 E-value=0.34 Score=47.35 Aligned_cols=95 Identities=19% Similarity=0.159 Sum_probs=61.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHh--CC---------C-cEEEeCCCHHHHHHhcCCc
Q 019199 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSL--LG---------A-DKFVVSSDLEQMKALGKSL 245 (344)
Q Consensus 179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~--~g---------~-~~~v~~~~~~~~~~~~~~~ 245 (344)
.+.++||++|+| .|..+..+++.-. .+|++++-+++-.+.+++. +. . -.++..+..+.+.+..+++
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~f 374 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEKF 374 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCCCC
Confidence 456789999875 3566667777655 5999999999988887541 11 0 1222223333444445789
Q ss_pred cEEEECCCCc-----------hhHHHHHHhcccCCEEEEE
Q 019199 246 DFIIDTASGD-----------HPFDAYMSLLKVAGVYVLV 274 (344)
Q Consensus 246 dvvid~~g~~-----------~~~~~~~~~l~~~G~iv~~ 274 (344)
|+++-....+ +.++.+.+.|+|+|.++.-
T Consensus 375 DvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~ 414 (521)
T PRK03612 375 DVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQ 414 (521)
T ss_pred CEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEe
Confidence 9987533321 1357888999999998864
Done!