Query 019207
Match_columns 344
No_of_seqs 129 out of 232
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 07:35:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019207.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019207hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2970 Predicted membrane pro 100.0 6E-113 1E-117 809.7 22.8 312 8-341 4-319 (319)
2 PF04080 Per1: Per1-like ; In 100.0 9E-108 2E-112 775.7 24.5 254 70-333 2-267 (267)
3 COG5237 PER1 Predicted membran 100.0 2.4E-92 5.1E-97 655.9 19.9 300 12-337 6-315 (319)
4 PF05875 Ceramidase: Ceramidas 97.5 0.0071 1.5E-07 57.5 17.7 186 120-330 24-236 (262)
5 PF03006 HlyIII: Haemolysin-II 97.4 0.0039 8.5E-08 56.7 13.7 155 167-323 44-220 (222)
6 PF12036 DUF3522: Protein of u 96.8 0.036 7.7E-07 50.8 13.5 92 171-270 34-137 (186)
7 TIGR01065 hlyIII channel prote 95.8 0.42 9.1E-06 44.0 15.0 150 167-326 39-198 (204)
8 PRK15087 hemolysin; Provisiona 94.7 0.77 1.7E-05 43.0 13.0 149 167-327 54-211 (219)
9 KOG0748 Predicted membrane pro 84.9 41 0.00089 33.0 18.5 153 181-337 98-275 (286)
10 COG1272 Predicted membrane pro 67.8 78 0.0017 30.1 11.1 40 168-207 59-103 (226)
11 PF10277 Frag1: Frag1/DRAM/Sfk 56.6 1.4E+02 0.0031 26.4 12.6 91 112-209 41-133 (215)
12 PF11416 Sed5p: Integral membr 53.1 8.2 0.00018 25.5 1.2 20 25-44 3-22 (29)
13 PF13965 SID-1_RNA_chan: dsRNA 50.4 1.2E+02 0.0026 32.7 10.2 30 304-333 528-560 (570)
14 PF10709 DUF2511: Protein of u 27.0 25 0.00054 28.8 0.4 13 106-118 5-17 (87)
15 PF15174 PRNT: Prion-related p 21.2 41 0.00088 24.6 0.5 9 308-316 26-34 (51)
No 1
>KOG2970 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=5.6e-113 Score=809.72 Aligned_cols=312 Identities=47% Similarity=0.925 Sum_probs=282.4
Q ss_pred HHHHHHHHHHhhccccCCCCCCchhHHHHHHHhhhcCCCCCCccCccccCCCCCCCCCCCcCCcchhhhhccCCCCCCCc
Q 019207 8 WVALFVVLSCLLGVLDASAGDADPLYRACVKQCEETGCVGQKCFPHCKFSSDGASINGPWYMQEPLYLQWKKWDCLSDCR 87 (344)
Q Consensus 8 ~~~~~~~~~~l~~~~~AS~GD~~p~f~~Cv~~C~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~pl~l~l~~W~C~sdC~ 87 (344)
|+.+++++.++ ...+||+||++|+|++|+++||.++|+++.+.. +.+ +..|++.|++.|||.+||+
T Consensus 4 ~~v~~ll~~c~-~~~~aS~GD~~~~y~~Cv~~Ce~~~c~~~~~~~-----~~~--------~~~~l~~r~~~wdc~s~C~ 69 (319)
T KOG2970|consen 4 WVVKFLLLKCL-VQFEASPGDRKPGYVDCVQGCEANECSNNYIDP-----QTN--------MFHPLYTRLWAWDCCSDCR 69 (319)
T ss_pred eehHHHHHHHH-hhhccCCCCCchhHHHHHHHHhhccCCCCcCCc-----ccc--------ccchhHHHHHhcCcchhcC
Confidence 33444444454 568999999999999999999999999865432 222 2349999999999999999
Q ss_pred ccchHhHHHhHHhcCCCCcccccccCccccccccchHHHHHHHhHHHHHHHhHHHHHHHHHhhCCCCCCccccccchhhH
Q 019207 88 YNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLW 167 (344)
Q Consensus 88 Y~Cm~~~t~~r~~~~~~i~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~G~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 167 (344)
|+||+.++++|.++|+|++||||||||+|++||||||||+||++||++|++|+.+ +|.+.+++++.+|+ ++|
T Consensus 70 Y~Cm~~t~~~~~~~~~pi~qfhGKWpFlrvlGiQEp~SviFS~lNl~~h~~g~~~------~r~~~~~~~~~r~~--~l~ 141 (319)
T KOG2970|consen 70 YQCMWTTESEFIKRGGPIPQFHGKWPFLRVLGIQEPFSVIFSFLNLITHYKGLVK------FRRPKKPNRPTRYE--RLW 141 (319)
T ss_pred ceeeeeehhhHHhcCCccccccCCcchhhhhhccchHHHHHHHHHHHHHHHHHhh------eecccCCCCcchhc--cch
Confidence 9999999999999999999999999999999999999999999999999999644 66677778888877 699
Q ss_pred HHHHHHHHHHHHhHhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHHHhhhccccc
Q 019207 168 HIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDE-AARVMVAAPLLAFVTTHILYLNFYK 246 (344)
Q Consensus 168 ~~~~~v~~~aW~~StiFH~RD~~~TEkLDYf~A~a~vl~~l~~~~~R~f~l~~~-~~r~~~~~~~~~~~~~Hi~yL~~~~ 246 (344)
++|+++|||||+||+|||+||+++|||||||+|+++|+||+|++++|+++++.. ..|.+++++++++|++||.|||+++
T Consensus 142 ~I~a~i~mnawiwSsvFH~rD~~lTEklDYf~A~~~vlf~ly~a~ir~~~i~~~~~~~~~ita~fla~ya~Hi~yls~~~ 221 (319)
T KOG2970|consen 142 LIYAYIGMNAWIWSSVFHIRDVPLTEKLDYFSAYLTVLFGLYVALIRMLSIQSLPALRGMITAIFLAFYANHILYLSFYN 221 (319)
T ss_pred hhHHHHHHHHHHHHHhhhhcCCchHhhhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhhee
Confidence 999999999999999999999999999999999999999999999999999876 7788999999999999999999999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHh-hhcCCcchHHHHHHHH--HHHHHHhhhhcCCCcccchhhhHHhhhccchhHHH
Q 019207 247 LDYGWNMKVCVVMAVAQLLIWATWAG-ITRHPSRWKLWVVVFG--GALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYI 323 (344)
Q Consensus 247 fdY~YNM~~nv~~G~~~~~lW~~~~~-~~~~~~~~~~~~~v~~--~~lamsLEl~DFpP~~~~iDAHALWHl~TIp~~~~ 323 (344)
|||||||++||++|++|+++|..|++ ++++|+.|+++++.+. +.+||+|||+||||+.|++|||||||++|||++++
T Consensus 222 fdYgyNm~~~v~~g~iq~vlw~~~~~~~~~~~s~~~i~~~~i~~~~~LA~sLEi~DFpPy~~~iDAHALWHlaTIplt~~ 301 (319)
T KOG2970|consen 222 FDYGYNMIVCVAIGVIQLVLWLVWSFKKRNLPSFWRIWPILIVIFFFLAMSLEIFDFPPYAWLIDAHALWHLATIPLTIL 301 (319)
T ss_pred cccccceeeehhhHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHhhcCCchhhhcchHHHHHhhcCccHHH
Confidence 99999999999999999999999994 4678999997765444 59999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHhhhh
Q 019207 324 WWSFIRDDAEFQTANMLK 341 (344)
Q Consensus 324 wy~Fl~~D~~~~~~~~~~ 341 (344)
||+|+.+|+++.|+.++|
T Consensus 302 ~~~Fv~~d~~~~t~~~l~ 319 (319)
T KOG2970|consen 302 WYDFVSDDYDFATGVRLK 319 (319)
T ss_pred HHHHhhchhhhhcceecC
Confidence 999999999999987765
No 2
>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [].
Probab=100.00 E-value=8.8e-108 Score=775.72 Aligned_cols=254 Identities=47% Similarity=0.859 Sum_probs=234.1
Q ss_pred CcchhhhhccCCCCCCCcccchHhHHHhHHhcCCCCcccccccCccccccccchHHHHHHHhHHHHHHHhHHHHHHHHHh
Q 019207 70 QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYY 149 (344)
Q Consensus 70 ~~pl~l~l~~W~C~sdC~Y~Cm~~~t~~r~~~~~~i~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~G~~~~~~~~~~ 149 (344)
++|+++|+++|||+|||||+|||++|++|+++|+|++||||||||+|++||||||||+||++|+++|++|+++++ +
T Consensus 2 ~~Pl~l~l~~W~C~~dC~Y~Cm~~~t~~r~~~g~~i~QfhGKWPF~Rv~GiQEp~Sv~FSllNl~~h~~~~~~~~----~ 77 (267)
T PF04080_consen 2 SLPLYLRLLGWDCESDCDYQCMWIITEERIKNGEPIVQFHGKWPFKRVLGIQEPASVLFSLLNLLAHYRGLRKFR----R 77 (267)
T ss_pred CCCcchHhcCCCCchhCcCcCcHHHHHHHHHcCCCcccccccccchhhhcCchHHHHHHHHHhHHHHHHHHHHHH----H
Confidence 579999999999999999999999999999999999999999999999999999999999999999999998854 3
Q ss_pred hCCCCCCccccccchhhHHHHHHHHHHHHHhHhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHH
Q 019207 150 KLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVR-DEAARVMVA 228 (344)
Q Consensus 150 ~~~~~~~~~~~y~~~~~~~~~~~v~~~aW~~StiFH~RD~~~TEkLDYf~A~a~vl~~l~~~~~R~f~l~-~~~~r~~~~ 228 (344)
+.+.+.+.++ .|+++++||||||+||||||+||+++|||||||+|+++|++|+|++++|+|+++ ++..+.+++
T Consensus 78 ~~~~~~p~~~------~~~~~~~v~~naW~wStvFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~~~~~~~ 151 (267)
T PF04080_consen 78 QVPRNSPMYP------YYIIYAIVSMNAWIWSTVFHTRDTPLTEKLDYFSAGATVLFGLYAAIVRIFRLYRRRRLRRIFT 151 (267)
T ss_pred hccCCCCCcC------eeehHHHHHHHHHHHHHHHHHhcccHhhHhHHhhhHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 4444333333 267899999999999999999999999999999999999999999999999994 556678899
Q ss_pred HHHHHHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCcc---------hHHH--HHHHHHHHHHHhhh
Q 019207 229 APLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSR---------WKLW--VVVFGGALAMLLEI 297 (344)
Q Consensus 229 ~~~~~~~~~Hi~yL~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~---------~~~~--~~v~~~~lamsLEl 297 (344)
++|+++|++||.||++.||||||||++||++|++|+++|++|++.++++.+ ++++ ++++++.+||+|||
T Consensus 152 ~~~~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~lam~LEl 231 (267)
T PF04080_consen 152 ALCIAFYIAHVSYLSFVRFDYGYNMKANVAVGLLQNILWLLWSFRNYRRYPSVKKSYSKRWKLWPILFVVLTILAMSLEL 231 (267)
T ss_pred HHHHHHHHHHHHHccccccccHhHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998754433 7777 77888999999999
Q ss_pred hcCCCcccchhhhHHhhhccchhHHHHHHHHHHHHh
Q 019207 298 YDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAE 333 (344)
Q Consensus 298 ~DFpP~~~~iDAHALWHl~TIp~~~~wy~Fl~~D~~ 333 (344)
+||||+++++|||||||++||||+++||+|+++|+|
T Consensus 232 ~DFpP~~~~lDAHALWHl~Tip~~~~wy~Fl~~D~~ 267 (267)
T PF04080_consen 232 FDFPPIFWLLDAHALWHLATIPPTYLWYDFLIDDAE 267 (267)
T ss_pred hccCcccccchHHHHHHHHHhhHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999986
No 3
>COG5237 PER1 Predicted membrane protein [Function unknown]
Probab=100.00 E-value=2.4e-92 Score=655.91 Aligned_cols=300 Identities=31% Similarity=0.452 Sum_probs=259.0
Q ss_pred HHHHHHhhccccCCCCCCchhHHHHHHHhhhc-CCCCCCccCccccCCCCCCCCCCCcCCcchhhhhccCCCCCCCcccc
Q 019207 12 FVVLSCLLGVLDASAGDADPLYRACVKQCEET-GCVGQKCFPHCKFSSDGASINGPWYMQEPLYLQWKKWDCLSDCRYNC 90 (344)
Q Consensus 12 ~~~~~~l~~~~~AS~GD~~p~f~~Cv~~C~~~-~C~~~~~~~~~~~~~~~~~~~~~~~~~~pl~l~l~~W~C~sdC~Y~C 90 (344)
++.++.+...+.|||||++|||.+|+.+|++. .|..++ +| . ...|++.++++|||.|+|+|+|
T Consensus 6 v~t~l~~~~~vt~s~gd~~~~~~~C~~~C~en~rc~~n~--------~d-----t---n~~pL~~klf~wDc~s~cgy~C 69 (319)
T COG5237 6 VVTLLVHCFLVTCSPGDNLDEMKYCFGKCFENSRCNLNK--------TD-----T---NMFPLVDKLFGWDCDSKCGYMC 69 (319)
T ss_pred hHHHHHHHheeecCCCCCcHHHHHHHHHHHHhcccCCCc--------CC-----c---ccccHHHHHHcCccccccchHH
Confidence 33333444578899999999999999999966 884432 11 1 3568999999999999999999
Q ss_pred hHhHHHhHHhcCCCCcccccccCccccccccchHHHHHHHhHHHHHHHhHHHHHHHHHhhCCC-CCCccccccchhhHHH
Q 019207 91 MVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPL-KQTKKAYYEFSPLWHI 169 (344)
Q Consensus 91 m~~~t~~r~~~~~~i~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~G~~~~~~~~~~~~~~-~~~~~~~y~~~~~~~~ 169 (344)
++..++-+.+.++|+.||||||||.||+||||++|++||++|+++||.|+.++. ++++. .+.+|.+| ++
T Consensus 70 ~~~~~~~~~~~n~~~~q~hGkW~F~rVlG~qEfFS~~FS~~Nfi~hy~gfh~m~----r~i~~e~~~~R~~~------l~ 139 (319)
T COG5237 70 HLLCLKFTNSGNIKIYQRHGKWGFQRVLGMQEFFSALFSFMNFITHYIGFHRML----RKILRETRLGRLYY------LQ 139 (319)
T ss_pred HHHHHHHhccCCchhhhhcCccceeeehhHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcccccccceEE------ee
Confidence 999999999999999999999999999999999999999999999999998843 34433 33345444 34
Q ss_pred HHHHHHHHHHhHhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHhcccch----hHHHHHHHHHHHHHHHHHhhhcccc
Q 019207 170 YGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRD----EAARVMVAAPLLAFVTTHILYLNFY 245 (344)
Q Consensus 170 ~~~v~~~aW~~StiFH~RD~~~TEkLDYf~A~a~vl~~l~~~~~R~f~l~~----~~~r~~~~~~~~~~~~~Hi~yL~~~ 245 (344)
++++||+||+||+|||+||+++|||+|||+|+++|++|+|.+.+|+.++.. +..|...+++.+++|+.||.||+++
T Consensus 140 wv~igmlAwi~SsvFHird~~iTeklDYF~AgltVLfGfy~~lvrm~~~~~~p~~K~~~~~~~aifia~fa~Hi~rls~i 219 (319)
T COG5237 140 WVYIGMLAWISSSVFHIRDNTITEKLDYFLAGLTVLFGFYMALVRMILIVSPPIEKATRGPLQAIFIAFFAYHIHRLSNI 219 (319)
T ss_pred HHHHHHHHHHHHhheeeeccchhhhHHHHHhhHHHHHHHHHHHHHHHHhhcCchHHHHHhHHHHHHHHHHHHHHHHHhhc
Confidence 579999999999999999999999999999999999999999999998753 4456677889999999999999999
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHhhhcCC--cchHHH--HHHHHHHHHHHhhhhcCCCcccchhhhHHhhhccchhH
Q 019207 246 KLDYGWNMKVCVVMAVAQLLIWATWAGITRHP--SRWKLW--VVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLT 321 (344)
Q Consensus 246 ~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~--~~~~~~--~~v~~~~lamsLEl~DFpP~~~~iDAHALWHl~TIp~~ 321 (344)
+|||+|||++|+++|++|+++|...+..+++. ..||-+ .+|+.+.+||||||+||||+-++||||||||++|+|++
T Consensus 220 ~fdY~YNm~~n~aigv~q~iL~~~~s~~ny~~~g~~~kr~p~~~v~~~~lA~slElfDf~pya~lIDaHAlWHL~t~~~t 299 (319)
T COG5237 220 EFDYVYNMISNCAIGVTQTILSHLVSFLNYRKLGHTFKRIPLFFVFFFFLAGSLELFDFPPYAYLIDAHALWHLITCIST 299 (319)
T ss_pred cceeeehhhhcchHHHHHHHHHHHHHHhhhHhhhhhhhhhhHHHHHHHHHhhhhhhhccCcHHHHhhHHHHhHhhhccch
Confidence 99999999999999999999999999876544 223433 45667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHH
Q 019207 322 YIWWSFIRDDAEFQTA 337 (344)
Q Consensus 322 ~~wy~Fl~~D~~~~~~ 337 (344)
.++|+|..+|..|...
T Consensus 300 ~~ly~F~~~d~~y~~n 315 (319)
T COG5237 300 PFLYLFWSGDVYYHGN 315 (319)
T ss_pred HHHHHhhhcceeeecc
Confidence 9999999999887654
No 4
>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane
Probab=97.55 E-value=0.0071 Score=57.46 Aligned_cols=186 Identities=16% Similarity=0.072 Sum_probs=95.8
Q ss_pred ccchHHHHHHHhHHHHHHHhHHHHHHHHHhhCCCCCCccccccchhhHHHHHHHHHHHHHhHhhhhccCCCccchhhHHH
Q 019207 120 IQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSS 199 (344)
Q Consensus 120 iQEp~SvlFSllNl~~h~~G~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~v~~~aW~~StiFH~RD~~~TEkLDYf~ 199 (344)
+=||.=++-++.=+++-..|+++. ++ .+.+. .+ ...+..+..++ +-|+.||+-=...|+-+|=..
T Consensus 24 iAEf~NtlSNl~fi~~al~gl~~~----~~---~~~~~-~~------~l~~~~l~~VG-iGS~~FHaTl~~~~ql~DelP 88 (262)
T PF05875_consen 24 IAEFWNTLSNLAFIVAALYGLYLA----RR---RGLER-RF------ALLYLGLALVG-IGSFLFHATLSYWTQLLDELP 88 (262)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHH----hh---ccccc-hh------HHHHHHHHHHH-HhHHHHHhChhhhHHHhhhhh
Confidence 568998887777777777766552 12 11111 11 12233333444 889999998889999999776
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH----HHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHh--h
Q 019207 200 AVALLGFSLILAILRSFNVRDEAARVMVAAPLL----AFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAG--I 273 (344)
Q Consensus 200 A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~~~----~~~~~Hi~yL~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~--~ 273 (344)
-.-..+..++...-|.. .++..|......+. +.-+.|... .+. . ..++.+|.....+.+.-.. .
T Consensus 89 Ml~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~t~~~~~~---~~p-~----~~~~~f~~~~~~~~~~~~~~~~ 158 (262)
T PF05875_consen 89 MLWATLLFLYIVLTRRY--SSPRYRLALPLLLFIYAVVVTVLYFVL---DNP-V----FHQIAFASLVLLVILRSIYLIR 158 (262)
T ss_pred HHHHHHHHHHHHhcccc--cCchhhHHHHHHHHHHHHHHHHHHhhh---ccc-h----hhhhhHHHHHHHHHHHHHHHHH
Confidence 54333333333333332 11111222222111 112223321 111 1 1122333333222221111 1
Q ss_pred h------cCCcchHHH-HHHHHHHHHHHhhhhcC--------------CCcccchhhhHHhhhccchhHHHHHHHHHH
Q 019207 274 T------RHPSRWKLW-VVVFGGALAMLLEIYDF--------------PPYYGFLDAHAIWHATTIPLTYIWWSFIRD 330 (344)
Q Consensus 274 ~------~~~~~~~~~-~~v~~~~lamsLEl~DF--------------pP~~~~iDAHALWHl~TIp~~~~wy~Fl~~ 330 (344)
. +++...++. ..++...+|..+-..|- .|+..++--|++||+.|---+++...+.+-
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~~~ 236 (262)
T PF05875_consen 159 RRVRDACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVFVAY 236 (262)
T ss_pred HhcCchhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 122223333 33445667888888886 356667789999999998888888777544
No 5
>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins. This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane
Probab=97.43 E-value=0.0039 Score=56.66 Aligned_cols=155 Identities=17% Similarity=0.220 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHhHhhhhc-------cCCCccchhhHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH-HHHHHHHH
Q 019207 167 WHIYGFLSMNSWFWSAVFHS-------RDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAP-LLAFVTTH 238 (344)
Q Consensus 167 ~~~~~~v~~~aW~~StiFH~-------RD~~~TEkLDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~-~~~~~~~H 238 (344)
..+|.+..+.-.+.||++|+ +.-..-.|+||.+-...+..+..-...-.+.-++.......... ++++....
T Consensus 44 ~~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~~gI~l~i~gs~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 123 (222)
T PF03006_consen 44 FLIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDYAGIFLLIAGSYTPFIYYGFYCHPWLGWFYLAFIWILALIGIV 123 (222)
T ss_pred HHHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcchhhhhHhHhhhhhhHHHhhccccchHHHHHHHHHHHHHHHhHH
Confidence 34567777777899999999 34566779999997666655543333222211222222111111 11111111
Q ss_pred hhhccccccc----ccchhhhHHHHHHHHHHHHHHHHhhhc---CCc-chHHHHHHHHHHHHHHhhhhcCCCcc--cchh
Q 019207 239 ILYLNFYKLD----YGWNMKVCVVMAVAQLLIWATWAGITR---HPS-RWKLWVVVFGGALAMLLEIYDFPPYY--GFLD 308 (344)
Q Consensus 239 i~yL~~~~fd----Y~YNM~~nv~~G~~~~~lW~~~~~~~~---~~~-~~~~~~~v~~~~lamsLEl~DFpP~~--~~iD 308 (344)
..+ ...++ ..--+.+-+++|....+...-...... .+. ........++-.+|+.+-..++|.-+ +-+|
T Consensus 124 -~~~-~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G~~fy~~~~PEr~~pg~fD 201 (222)
T PF03006_consen 124 -LSL-FPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRIFFLGGWGSPDPLWLLILGGVLYLLGAVFYATRIPERWFPGKFD 201 (222)
T ss_pred -hhc-chhhcCCccceeeehHhHHHHHHHHhhhHHHHHHhccccchHHHHHHHHHHHHHHHhHHHhhhccccccCCCCcC
Confidence 111 11111 222333444555444433332111111 111 11122233345678888999987632 2344
Q ss_pred ----hhHHhhhccchhHHH
Q 019207 309 ----AHAIWHATTIPLTYI 323 (344)
Q Consensus 309 ----AHALWHl~TIp~~~~ 323 (344)
+|.+||+.++--++.
T Consensus 202 ~~g~sHqi~Hi~v~~~~~~ 220 (222)
T PF03006_consen 202 IWGHSHQIWHIFVVLAALC 220 (222)
T ss_pred CCCccHHHHHHHHHHHHHH
Confidence 999999987654443
No 6
>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.
Probab=96.80 E-value=0.036 Score=50.79 Aligned_cols=92 Identities=14% Similarity=0.243 Sum_probs=51.5
Q ss_pred HHHHHHHHHhHhhhhccC-CC----cc----chhhHHHHHHHHHHHHHHHHHHhcccchhHHH--HHHHHHHHHHHHHHh
Q 019207 171 GFLSMNSWFWSAVFHSRD-VD----LT----EKFDYSSAVALLGFSLILAILRSFNVRDEAAR--VMVAAPLLAFVTTHI 239 (344)
Q Consensus 171 ~~v~~~aW~~StiFH~RD-~~----~T----EkLDYf~A~a~vl~~l~~~~~R~f~l~~~~~r--~~~~~~~~~~~~~Hi 239 (344)
+.++..+=++|+.+|+.| .+ ++ ++|||......++ +....++..-++++...+ .++.+.++++.
T Consensus 34 a~v~~~tm~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~~s~~-~~~vtl~~~a~~~~~~~~~l~~~~~~~~ai~---- 108 (186)
T PF12036_consen 34 AFVYTFTMFFSTFYHACDSGPGEIFLCIMDWHRLQNIDFIGSFL-SIWVTLCAMARLDEPLKSVLHYFGALVIAIF---- 108 (186)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEeechHHHHHHHHHHHHHH-HHHHHHHHhccCCHHHHHHHHHHHHHHHHHH----
Confidence 678888999999999999 55 44 4788877654333 233333444444443332 22333333322
Q ss_pred hhcccccccccchhhhHHHHHHHH-HHHHHHH
Q 019207 240 LYLNFYKLDYGWNMKVCVVMAVAQ-LLIWATW 270 (344)
Q Consensus 240 ~yL~~~~fdY~YNM~~nv~~G~~~-~~lW~~~ 270 (344)
... .+||+ .|+..-+++|++- .+-|+..
T Consensus 109 ~~~--~~~~~-~~~~~Pi~~~~~i~~~~w~~r 137 (186)
T PF12036_consen 109 QQK--DRWSL-WNTIGPILIGLLILLVSWLYR 137 (186)
T ss_pred Hhh--Ccccc-hhhHHHHHHHHHHHHHHHhee
Confidence 223 47885 4666666777543 3344433
No 7
>TIGR01065 hlyIII channel protein, hemolysin III family. This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.
Probab=95.84 E-value=0.42 Score=44.04 Aligned_cols=150 Identities=15% Similarity=0.176 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHhHhhhhccCC-----CccchhhHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH-HHHH-HHHHh
Q 019207 167 WHIYGFLSMNSWFWSAVFHSRDV-----DLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAP-LLAF-VTTHI 239 (344)
Q Consensus 167 ~~~~~~v~~~aW~~StiFH~RD~-----~~TEkLDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~-~~~~-~~~Hi 239 (344)
..+|..-.+...+.||+||+-+. .+-+|+||.+-..+|.-+..=.+.-.+ +++....+..+. .+++ -+.+-
T Consensus 39 ~~vy~~~~~~~~~~St~yH~~~~s~~~~~~~~rlD~~gI~~lIaGsytP~~~~~~--~~~~~~~~~~~iw~la~~gi~~~ 116 (204)
T TIGR01065 39 FSIYGISLILLFLVSTLYHSIPKGSKAKNWLRKIDHSMIYVLIAGTYTPFLLLAL--PGPLGWTVLWIIWGLAIGGIIYK 116 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcCchhHHHHHHHccHHHHHHHHHHhhHHHHHHHc--CCcHHHHHHHHHHHHHHHHHHHH
Confidence 45677878888999999998873 145688999876666655443333333 222222222211 1111 11111
Q ss_pred hhcccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCcchHHHHHH---HHHHHHHHhhhhcCCCcccchhhhHHhhhc
Q 019207 240 LYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVV---FGGALAMLLEIYDFPPYYGFLDAHAIWHAT 316 (344)
Q Consensus 240 ~yL~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~~~~~~~v---~~~~lamsLEl~DFpP~~~~iDAHALWHl~ 316 (344)
.+...+++. .-...=+++|..-.+..-. ....-+. .-+..++ +.-.+++.+=..|+|--+ +-|.+||+.
T Consensus 117 -~~~~~~~r~-~r~~~y~~~G~~~v~~~~~--~~~~~~~-~~~~~l~~gg~~Y~~G~~fY~~~~p~~~---~~H~iwH~f 188 (204)
T TIGR01065 117 -LFFHKRPRW-LSLFLYLIMGWLVVLVIKP--LYHNLPG-AGFSLLAAGGLLYTVGAIFYALKWPIPF---TYHAIWHLF 188 (204)
T ss_pred -HHccCCCch-hHHHHHHHHHHHHHHHHHH--HHHhCCH-HHHHHHHHHhHHHHcchHheeecCCCCC---CcChHHHHH
Confidence 111223331 2333344444333222111 1111121 1111111 223456667667877433 229999998
Q ss_pred cchhHHHHHH
Q 019207 317 TIPLTYIWWS 326 (344)
Q Consensus 317 TIp~~~~wy~ 326 (344)
.+-=+...|-
T Consensus 189 V~~g~~~h~~ 198 (204)
T TIGR01065 189 VLGASACHFV 198 (204)
T ss_pred HHHHHHHHHH
Confidence 8776666553
No 8
>PRK15087 hemolysin; Provisional
Probab=94.70 E-value=0.77 Score=42.99 Aligned_cols=149 Identities=16% Similarity=0.208 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHhHhhhhccCCC----ccchhhHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH-HHHHHHHHhhh
Q 019207 167 WHIYGFLSMNSWFWSAVFHSRDVD----LTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAP-LLAFVTTHILY 241 (344)
Q Consensus 167 ~~~~~~v~~~aW~~StiFH~RD~~----~TEkLDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~~~~-~~~~~~~Hi~y 241 (344)
..+|+.-.+.-...||+||+=..+ +=+|+||.+-..+|.-+..=...-.+ +.+..+.++.+. .+++. .=+..
T Consensus 54 ~~vy~~s~~~l~~~StlYH~~~~~~~~~~~~rlDh~~I~llIaGsytP~~~~~~--~~~~~~~l~~~iW~~a~~-Gi~~~ 130 (219)
T PRK15087 54 YSLYGGSMILLFLASTLYHAIPHQRAKRWLKKFDHCAIYLLIAGTYTPFLLVGL--DSPLARGLMIVIWSLALL-GILFK 130 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHccHHHHHHHHHHhhHHHHHHHc--cCHHHHHHHHHHHHHHHH-HHHHH
Confidence 356788778889999999986521 23469999866555444332222222 222222222111 11111 11111
Q ss_pred c-ccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCcchHHHHHHH---HHHHHHHhhhhcCCCcccchhhhHHhhhcc
Q 019207 242 L-NFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVF---GGALAMLLEIYDFPPYYGFLDAHAIWHATT 317 (344)
Q Consensus 242 L-~~~~fdY~YNM~~nv~~G~~~~~lW~~~~~~~~~~~~~~~~~~v~---~~~lamsLEl~DFpP~~~~iDAHALWHl~T 317 (344)
+ ...+|+ ...+..=+++|.+-.+.-. ......+.. -+..++. .-+.++.+=..|-.|+ +|++||+..
T Consensus 131 ~~~~~~~r-~l~~~~Yl~mGw~~v~~~~--~l~~~~~~~-~l~~l~~GG~~Y~~G~~fY~~~~~p~-----~H~IwH~fV 201 (219)
T PRK15087 131 LAFAHRFK-VLSLVTYLAMGWLSLIVIY--QLAIKLAIG-GVTLLAVGGVVYSLGVIFYVCKRIPY-----NHAIWHGFV 201 (219)
T ss_pred HHhcCCCc-hHHHHHHHHHHHHHHHHHH--HHHHhCCHH-HHHHHHHHhHHHHhhHHHHccCCCCC-----chhHHHHHH
Confidence 1 123444 2345555556654433222 111122211 1111111 2245566666676665 899999988
Q ss_pred chhHHHHHHH
Q 019207 318 IPLTYIWWSF 327 (344)
Q Consensus 318 Ip~~~~wy~F 327 (344)
+-=+...|--
T Consensus 202 l~ga~~H~~a 211 (219)
T PRK15087 202 LGGSVCHFLA 211 (219)
T ss_pred HHHHHHHHHH
Confidence 7777666643
No 9
>KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms]
Probab=84.92 E-value=41 Score=32.97 Aligned_cols=153 Identities=18% Similarity=0.206 Sum_probs=82.7
Q ss_pred HhhhhccCCCccc-------hhhHHHHHHHHHHHHHHHHHHhcccchhHHHHHH-HHHHHH-HHHHHhhhcccccc--cc
Q 019207 181 SAVFHSRDVDLTE-------KFDYSSAVALLGFSLILAILRSFNVRDEAARVMV-AAPLLA-FVTTHILYLNFYKL--DY 249 (344)
Q Consensus 181 StiFH~RD~~~TE-------kLDYf~A~a~vl~~l~~~~~R~f~l~~~~~r~~~-~~~~~~-~~~~Hi~yL~~~~f--dY 249 (344)
|+++|+=-.- .| ||||.+-.+.+.-+....+.-.|--.+.. |.+. .+.+++ +.+.=+. + ..++ .+
T Consensus 98 S~~~H~~~~~-s~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~~~-~~iy~~~~~~lgi~~~~~~-l-~~~~~~~~ 173 (286)
T KOG0748|consen 98 SSLYHLFSCH-SEKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHPFF-RLIYLPIILVLGLLAIFVS-L-SDKFRTPK 173 (286)
T ss_pred HHHHHHHhcc-cHHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccchHH-HHHHHHHHHHHHHHHheee-c-hhhhCCcc
Confidence 9999986554 44 68999977766666555444444332222 2121 111111 1111111 1 1122 12
Q ss_pred cchhhhHHHHHHHHH-HHHHHHHhhhc--C-Cc-chH---HHHHHHHHHHHHHhhhhcCCCcc--cchhh----hHHhhh
Q 019207 250 GWNMKVCVVMAVAQL-LIWATWAGITR--H-PS-RWK---LWVVVFGGALAMLLEIYDFPPYY--GFLDA----HAIWHA 315 (344)
Q Consensus 250 ~YNM~~nv~~G~~~~-~lW~~~~~~~~--~-~~-~~~---~~~~v~~~~lamsLEl~DFpP~~--~~iDA----HALWHl 315 (344)
--+-+++++++..-. ++=+.+..... + +. ... ...-.++..+|..+=....|--+ +.+|- |-|||.
T Consensus 174 ~r~~R~~~f~~~~~~~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv 253 (286)
T KOG0748|consen 174 RRPLRAGVFLLLGLSGILPLLHRLILFGGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHV 253 (286)
T ss_pred chhhHHHHHHHHHHhhccHhhhheeeecCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHH
Confidence 356777777765321 11111111110 1 11 111 11233345667777777877633 45665 999999
Q ss_pred ccchhHHHHHHHHHHHHhHHHH
Q 019207 316 TTIPLTYIWWSFIRDDAEFQTA 337 (344)
Q Consensus 316 ~TIp~~~~wy~Fl~~D~~~~~~ 337 (344)
.++--++.+++=...|.+.+-+
T Consensus 254 ~vv~~a~~~~~a~~~~~~~~~~ 275 (286)
T KOG0748|consen 254 LVVLAALFHLEAVLLDYEWRHS 275 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998765
No 10
>COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only]
Probab=67.78 E-value=78 Score=30.14 Aligned_cols=40 Identities=30% Similarity=0.397 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhHhhhhccCC-----CccchhhHHHHHHHHHHH
Q 019207 168 HIYGFLSMNSWFWSAVFHSRDV-----DLTEKFDYSSAVALLGFS 207 (344)
Q Consensus 168 ~~~~~v~~~aW~~StiFH~RD~-----~~TEkLDYf~A~a~vl~~ 207 (344)
.+|+.--+..-..||++|+=-. .+=+|+||.+-..+|.-+
T Consensus 59 ~iy~~sl~~l~~~St~YH~~~~~~~~k~~~rk~DH~~I~vLIAgS 103 (226)
T COG1272 59 SIYGLSLFLLFLVSTLYHSIPNGQKAKAILRKFDHSGIYVLIAGS 103 (226)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHccHHHHHHHHHHh
Confidence 4566656667899999997543 456899999876655544
No 11
>PF10277 Frag1: Frag1/DRAM/Sfk1 family; InterPro: IPR019402 This entry includes Frag1, DRAM and Sfk1 proteins. Frag1 (FGF receptor activating protein 1) is a protein that is conserved from fungi to humans. There are four potential iso-prenylation sites throughout the peptide, CILW (x2), CIIW and CIGL. Frag1 is a membrane-spanning protein that is ubiquitously expressed in adult tissues suggesting an important cellular function []. DRAM is a family of proteins conserved from nematodes to humans with six hydrophobic transmembrane regions and an endoplasmic reticulum signal peptide. It is a lysosomal protein that induces macro-autophagy as an effector of p53-mediated death, where p53 is the tumour-suppressor gene that is frequently mutated in cancer. Expression of DRAM is stress-induced []. This region is also part of a family of small plasma membrane proteins, referred to as Sfk1, that may act together with or upstream of Stt4p to generate normal levels of the essential phospholipid PI4P, thus allowing proper localisation of Stt4p to the actin cytoskeleton [, ].
Probab=56.58 E-value=1.4e+02 Score=26.39 Aligned_cols=91 Identities=25% Similarity=0.355 Sum_probs=55.0
Q ss_pred cCccccccccchHHHHHHHhHHHHHHHhHHHHHHHHHhh-C-CCCCCccccccchhhHHHHHHHHHHHHHhHhhhhccCC
Q 019207 112 WPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYK-L-PLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDV 189 (344)
Q Consensus 112 WPF~Rv~GiQEp~SvlFSllNl~~h~~G~~~~~~~~~~~-~-~~~~~~~~~y~~~~~~~~~~~v~~~aW~~StiFH~RD~ 189 (344)
||+.-=.|-++|-+-+|+++-.+.-.-..-. ...+++ . +..++.+.. ....-.+.++++..+-+--++|+..|.
T Consensus 41 ~P~IS~~G~~~Pe~~if~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~--l~~~~~~~g~~~~~gl~~~a~~~~~~~ 116 (215)
T PF10277_consen 41 LPYISDIGAYPPESYIFRFGLNISAFFRLLI--VYLRYRYVRQLASKCSRW--LNILSLVFGLLSAIGLILLAIFQSTEH 116 (215)
T ss_pred cCchhHhhCcCchhHHHHHHHHHHHHHHHHH--HHHHHHHHhhhccchhhH--HHHHHHHHHHHHHHHHHHhhhhccccC
Confidence 9999999999999999998765543332211 112222 1 111111111 222345678888888899999988887
Q ss_pred CccchhhHHHHHHHHHHHHH
Q 019207 190 DLTEKFDYSSAVALLGFSLI 209 (344)
Q Consensus 190 ~~TEkLDYf~A~a~vl~~l~ 209 (344)
+ ..-+.+|......+..
T Consensus 117 ~---~~H~~~a~~ff~~~~i 133 (215)
T PF10277_consen 117 P---TVHYIGAVLFFVSSFI 133 (215)
T ss_pred H---HHHHHHHHHHHHHHHH
Confidence 7 4555666544444433
No 12
>PF11416 Sed5p: Integral membrane protein Sed5p; InterPro: IPR021538 Sed5p interacts with Sly1p , a positive regulator of intracellular membrane fusion, allowing SM proteins to stay associated with the assembling fusion machinery. This allows for participation in late fusion steps []. ; PDB: 1MQS_B.
Probab=53.11 E-value=8.2 Score=25.47 Aligned_cols=20 Identities=20% Similarity=0.381 Sum_probs=15.3
Q ss_pred CCCCCchhHHHHHHHhhhcC
Q 019207 25 SAGDADPLYRACVKQCEETG 44 (344)
Q Consensus 25 S~GD~~p~f~~Cv~~C~~~~ 44 (344)
|.-||.-|||.||....+.+
T Consensus 3 ~IqdRT~EFqqcV~s~~k~n 22 (29)
T PF11416_consen 3 SIQDRTIEFQQCVSSYKKRN 22 (29)
T ss_dssp HHHB-HHHHHHHHHHHHHH-
T ss_pred chhHhhHHHHHHHHHHHHHH
Confidence 34589999999999998775
No 13
>PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1
Probab=50.44 E-value=1.2e+02 Score=32.68 Aligned_cols=30 Identities=30% Similarity=0.648 Sum_probs=19.5
Q ss_pred ccchhhhHHhhhccch---hHHHHHHHHHHHHh
Q 019207 304 YGFLDAHAIWHATTIP---LTYIWWSFIRDDAE 333 (344)
Q Consensus 304 ~~~iDAHALWHl~TIp---~~~~wy~Fl~~D~~ 333 (344)
.+..|.|-+||..... .+++.-.++-||.+
T Consensus 528 ~~f~D~HDiwH~~SA~alffsf~~l~~lDddL~ 560 (570)
T PF13965_consen 528 LGFFDWHDIWHFLSAIALFFSFLVLLTLDDDLD 560 (570)
T ss_pred cCccccHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 4778999999996643 34444455555544
No 14
>PF10709 DUF2511: Protein of unknown function (DUF2511); InterPro: IPR019648 This entry is represented by Bacteriophage PsP3, Gp28. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=26.97 E-value=25 Score=28.82 Aligned_cols=13 Identities=31% Similarity=0.767 Sum_probs=10.4
Q ss_pred cccccccCccccc
Q 019207 106 VKYHGKWPFIRVY 118 (344)
Q Consensus 106 ~QFhGKWPF~Rv~ 118 (344)
.||-+||||.|==
T Consensus 5 ~~fG~~Wpft~ee 17 (87)
T PF10709_consen 5 FEFGDKWPFTVEE 17 (87)
T ss_pred HHccCCCCceeee
Confidence 3788899999853
No 15
>PF15174 PRNT: Prion-related protein testis-specific
Probab=21.16 E-value=41 Score=24.60 Aligned_cols=9 Identities=33% Similarity=0.984 Sum_probs=7.0
Q ss_pred hhhHHhhhc
Q 019207 308 DAHAIWHAT 316 (344)
Q Consensus 308 DAHALWHl~ 316 (344)
-.|||||+-
T Consensus 26 vthSLW~Lq 34 (51)
T PF15174_consen 26 VTHSLWHLQ 34 (51)
T ss_pred HHHHHHhhc
Confidence 469999984
Done!