Your job contains 1 sequence.
>019213
MAGFFSLGRVSSSSNNNQEDQQHNPANPITPENWFWYKNEDISYKQGASFELWQQQAELL
LQQRQQQQQDLYSSSAAAGLGMGPISRSAINVVGGIDNSSSRSAFMMVRSSSGIGGGMSC
QDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAASKRREKQQQLALQQQRLQLRGE
TNKRPREANPISSSLACSRLPANASGFEVAENLPGEVSTQAVFRCVKVSGIDDSEDQFAY
QTSVNIGGHLFKGILYDQGPESTYTTGESSSGGGIQLQPLNLVTAGAGPDPVNTTATPVS
PAAAAVTASSSTAAFLDPSSLYPTPFTTFMAAAGTQFFPSPRSS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019213
(344 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080818 - symbol:STY1 "AT3G51060" species:3702... 616 3.9e-60 1
TAIR|locus:2155021 - symbol:SHI "SHORT INTERNODES" specie... 613 8.1e-60 1
TAIR|locus:2122234 - symbol:STY2 "AT4G36260" species:3702... 423 7.8e-48 3
TAIR|locus:2013109 - symbol:SRS7 "AT1G19790" species:3702... 462 8.1e-44 1
TAIR|locus:2005659 - symbol:SRS5 "AT1G75520" species:3702... 355 4.0e-39 2
TAIR|locus:2053134 - symbol:SRS4 "AT2G18120" species:3702... 345 2.7e-34 2
TAIR|locus:2050074 - symbol:SRS3 "SHI-related sequence3" ... 204 3.4e-34 2
TAIR|locus:2183078 - symbol:SRS8 "AT5G33210" species:3702... 282 9.7e-25 1
TAIR|locus:2096169 - symbol:SRS6 "AT3G54430" species:3702... 268 2.9e-23 1
>TAIR|locus:2080818 [details] [associations]
symbol:STY1 "AT3G51060" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=NAS]
[GO:0010051 "xylem and phloem pattern formation" evidence=IGI]
[GO:0048479 "style development" evidence=IGI] [GO:0048480 "stigma
development" evidence=IGI] [GO:0010252 "auxin homeostasis"
evidence=IGI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
GO:GO:0005634 EMBL:CP002686 GO:GO:0045893 GO:GO:0003677
GO:GO:0010051 GO:GO:0048479 GO:GO:0010252 IPI:IPI00518827
RefSeq:NP_190675.4 UniGene:At.35427 PRIDE:F4J383
EnsemblPlants:AT3G51060.1 GeneID:824270 KEGG:ath:AT3G51060
OMA:CTRIPSH GO:GO:0048480 InterPro:IPR007818 InterPro:IPR006511
InterPro:IPR006510 Pfam:PF05142 TIGRFAMs:TIGR01624
TIGRFAMs:TIGR01623 Uniprot:F4J383
Length = 370
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 134/282 (47%), Positives = 170/282 (60%)
Query: 75 SAAAGLGMGPISRSAINVVGGIDNSSS--RSAFMMVRS--SSGIGGGMSCQDCGNQAKKD 130
S+AAGLG+GP + + ++ G + + +A MM+RS S G GG+SCQDCGNQAKKD
Sbjct: 95 SSAAGLGVGPSNHNQFDISGETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKD 154
Query: 131 CAHMRCRTCCKSRGFDCQTHVKSTWVAASKXXXXXXXXXXXXXXXXX-XGET-NKRPREA 188
C+HMRCRTCCKSRGF+C THV+STWV A+K GE+ KR RE
Sbjct: 155 CSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHREN 214
Query: 189 NPI-SSSLACSRLPANASGFEVAENLPGEVSTQAVFRCVKVSGIDDSEDQFAYQTSVNIG 247
P SSSL C+R+P++ SG EV N P EVS+ AVFRCV+VS ++D E++FAYQT+V+IG
Sbjct: 215 LPATSSSLVCTRIPSH-SGLEVG-NFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIG 272
Query: 248 GHLFKGILYDQGPXXXXXXXXXXXXXXIQ------LQPLNLVTAGAGPDPVNXXXXXXXX 301
GH+FKGILYD GP Q LNL+TAG+ V
Sbjct: 273 GHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGGAQQLNLITAGSVT--VATASSSTPN 330
Query: 302 XXXXXXXXXXXXXFLDPSSLYPTPFTTFMAAAGTQFFPSPRS 343
++DP++LYPTP TFMA GTQFFP+PRS
Sbjct: 331 LGGIGSSSAAAATYIDPAALYPTPINTFMA--GTQFFPNPRS 370
>TAIR|locus:2155021 [details] [associations]
symbol:SHI "SHORT INTERNODES" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0009739 "response to gibberellin stimulus"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=TAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 EMBL:AB022211 GO:GO:0009740
InterPro:IPR007818 InterPro:IPR006511 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623
HOGENOM:HOG000242956 EMBL:AF152555 EMBL:AB493816 IPI:IPI00516668
RefSeq:NP_201436.1 UniGene:At.9638 STRING:Q9XGX0
EnsemblPlants:AT5G66350.1 GeneID:836767 KEGG:ath:AT5G66350
TAIR:At5g66350 eggNOG:NOG312758 InParanoid:Q9XGX0 OMA:EEEYAYK
PhylomeDB:Q9XGX0 ProtClustDB:CLSN2686693 Genevestigator:Q9XGX0
Uniprot:Q9XGX0
Length = 331
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 149/357 (41%), Positives = 190/357 (53%)
Query: 1 MAGFFSLGRVXXXXXXXQEDQQHNPANPITP--ENWFWYKNEDISY---KQGASFEXXXX 55
MAGFFSLG ++ + N NP + E+W W +N + + + G S++
Sbjct: 1 MAGFFSLGH--GGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLE 58
Query: 56 XXXXXXXXXXXXXXXXYSS------SAAAGLGMGPISRSAINVVGGIDNSSSRSAFMMVR 109
++AAGLG+GP +RS I GG A MM+R
Sbjct: 59 LWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGG--------ALMMMR 110
Query: 110 SSSGIGGGMSCQDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAASKXXXXXXXXX 169
S SG GG SCQDCGNQ+KKDC+HMRCRTCCKSRG DC THVKSTWV A+K
Sbjct: 111 SGSG-SGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLS 169
Query: 170 XXXXXXXXXGETNKRPREANPI-SSSLACSRLPAN-ASGFEVAENLPGEVSTQAVFRCVK 227
G KR RE P S+S+A +R+P+N SG EV N P EVS+ AVFRCV+
Sbjct: 170 TGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVG-NFPPEVSSSAVFRCVR 228
Query: 228 VSGIDDSEDQFAYQTSVNIGGHLFKGILYDQGPXXXXXXXXXXXXXXIQLQPLNLVTAGA 287
VS +DD E+++AY+T+V+IGGH+FKG+LYDQGP QPLNL+TAG
Sbjct: 229 VSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGS-------QPLNLITAG- 280
Query: 288 GPDPVNXXXXXXXXXXXXXXXXXXXXXFLDPSSL-YPTPFTTFMAAAGTQFFPSPRS 343
P + ++DP+SL YPTP TFM GT FF + RS
Sbjct: 281 ---P-SASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMT--GTHFFSNSRS 331
>TAIR|locus:2122234 [details] [associations]
symbol:STY2 "AT4G36260" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=NAS] [GO:0010051 "xylem
and phloem pattern formation" evidence=IGI;RCA] [GO:0048479 "style
development" evidence=IGI] [GO:0048480 "stigma development"
evidence=IGI] [GO:0010252 "auxin homeostasis" evidence=IGI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0048439 "flower
morphogenesis" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0010051 EMBL:AL022141 EMBL:AL161589
GO:GO:0048479 GO:GO:0010252 GO:GO:0048480 InterPro:IPR007818
InterPro:IPR006511 InterPro:IPR006510 Pfam:PF05142
TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623 IPI:IPI00529716 PIR:T04595
RefSeq:NP_195349.1 UniGene:At.31338 STRING:O65517 PRIDE:O65517
EnsemblPlants:AT4G36260.1 GeneID:829783 KEGG:ath:AT4G36260
TAIR:At4g36260 eggNOG:NOG125435 HOGENOM:HOG000242956 OMA:ITISCRD
PhylomeDB:O65517 ProtClustDB:CLSN2915899 ArrayExpress:O65517
Genevestigator:O65517 Uniprot:O65517
Length = 322
Score = 423 (154.0 bits), Expect = 7.8e-48, Sum P(3) = 7.8e-48
Identities = 82/154 (53%), Positives = 105/154 (68%)
Query: 118 MSCQDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAASKXXX-------XXXXXXX 170
+SC+DCGNQAKKDC HMRCRTCCKSRGFDC THV+STW+ ++
Sbjct: 92 ISCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGG 151
Query: 171 XXXXXXXXGETNKRP-REANP-ISSSLACSRLPANASGFEVAE-NLPGEVSTQAVFRCVK 227
G + P R +P + + + SRLP++++G E+ E + PGEVS+ A+FRCVK
Sbjct: 152 GSGSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVK 211
Query: 228 VSGIDDSED-QFAYQTSVNIGGHLFKGILYDQGP 260
+SG+DD D Q+AYQT+VNIGGHLFKGILYDQGP
Sbjct: 212 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGP 245
Score = 55 (24.4 bits), Expect = 7.8e-48, Sum P(3) = 7.8e-48
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 1 MAGFFSLGRVXXXXXXXQEDQQHNPANPITPENWFWYKN 39
MAG FSLG +E+ Q NW WY++
Sbjct: 1 MAGIFSLGGNNNNNGDEEEENQQQQKT-----NWVWYRS 34
Score = 50 (22.7 bits), Expect = 7.8e-48, Sum P(3) = 7.8e-48
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 315 FLDPSS--LYPTPFTT--FMAAAGTQFFPSPRSS 344
F+DP+S Y + TT FM GTQF+ +P S
Sbjct: 290 FVDPNSGGYYSSNMTTSVFMPP-GTQFYQNPPRS 322
>TAIR|locus:2013109 [details] [associations]
symbol:SRS7 "AT1G19790" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 EMBL:AC007797 InterPro:IPR007818
InterPro:IPR006511 InterPro:IPR006510 Pfam:PF05142
TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623 EMBL:AY924676 IPI:IPI00534060
PIR:A86331 RefSeq:NP_001031069.1 RefSeq:NP_173409.1
UniGene:At.51177 UniGene:At.68779 EnsemblPlants:AT1G19790.1
EnsemblPlants:AT1G19790.2 GeneID:838567 KEGG:ath:AT1G19790
TAIR:At1g19790 InParanoid:Q9FXH7 OMA:DHNEDKS PhylomeDB:Q9FXH7
ProtClustDB:CLSN2682535 Genevestigator:Q9FXH7 Uniprot:Q9FXH7
Length = 345
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 132/365 (36%), Positives = 171/365 (46%)
Query: 1 MAGFFSLGRVXXXXXXXQEDQQHNPANPITPENWFW-YKNEDISYKQGASFEXXXXXXXX 59
MAG F LG +++ HN N+ + YK+E + +G
Sbjct: 1 MAGLFYLGGRDHNKQDHHQEKDHNEDKS---NNYLYLYKDEIYNNNKGFEIFPPQYFQQQ 57
Query: 60 XXXXXXXXXXXXYSSSAAAGLGMGPISRSA-----INVVGGIDN-SSSRSAFMMVRSSSG 113
YS G +RS NVV + SS F + R
Sbjct: 58 QQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQ--- 114
Query: 114 IGGGMSCQDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAASKXXXXXXXXXXXXX 173
G M+CQDCGNQAKKDC HMRCRTCCKSRGFDCQTHVKSTWV+A+K
Sbjct: 115 --GNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPA 172
Query: 174 X----XXXXG----ETNKRPREANPI---SSSLACSRLP-ANASGFEVAENLPGEVSTQA 221
G + + + E N S+LAC+R+ A++SG E + +LP E+S+ A
Sbjct: 173 KRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETS-HLPPEISSPA 231
Query: 222 VFRCVKVSGIDDSEDQFAYQTSVNIGGHLFKGILYDQGPXXXXXXXXXXXXXXIQLQP-L 280
VFRC++VS IDD ++++AYQT+V+IGGH+FKGILYDQGP Q L
Sbjct: 232 VFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHL 291
Query: 281 NLVTAGAGPDPVNXXXXXXXXXXXXXXXXXXXXXFLDPSSLYP---TPFTTFMAAAGTQF 337
NL+ + N +DPSSLY TPF F+A GT F
Sbjct: 292 NLMDSTPSAATTNAVTAVNTNNGS-----------IDPSSLYTAVATPFNAFVAG-GTPF 339
Query: 338 FPSPR 342
F S R
Sbjct: 340 FASSR 344
>TAIR|locus:2005659 [details] [associations]
symbol:SRS5 "AT1G75520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0048438 "floral whorl development" evidence=RCA]
[GO:0048439 "flower morphogenesis" evidence=RCA] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC006434 GO:GO:0048467
InterPro:IPR007818 InterPro:IPR006511 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623
HOGENOM:HOG000242956 ProtClustDB:CLSN2682535 EMBL:AY800620
EMBL:AY924730 IPI:IPI00544601 PIR:F96785 RefSeq:NP_177684.1
UniGene:At.50038 STRING:Q9LQZ5 PRIDE:Q9LQZ5
EnsemblPlants:AT1G75520.1 GeneID:843888 KEGG:ath:AT1G75520
TAIR:At1g75520 eggNOG:NOG314702 InParanoid:Q9LQZ5 OMA:SGFTVMR
PhylomeDB:Q9LQZ5 ArrayExpress:Q9LQZ5 Genevestigator:Q9LQZ5
Uniprot:Q9LQZ5
Length = 346
Score = 355 (130.0 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 102/266 (38%), Positives = 132/266 (49%)
Query: 1 MAGFFSLG-RVXXXXXXXQEDQQHNPANPITPENWFWYKNEDISYKQGASFEXXXXXXXX 59
MAGFF LG R Q+ Q + + ++ + Y +D Y FE
Sbjct: 1 MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60
Query: 60 XXXXXXXXXXXXYSSSAAA--GLGMGPISRSAINVVGGIDNSSSRSAFMMVRSSSGIGG- 116
++S+ A GM P S+ N +N+ SRS + V S GG
Sbjct: 61 QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNN-----NNNRSRSLYFNVVSDHEPGGF 115
Query: 117 ------GMSCQDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAASKXXXXXXXXXX 170
GM+CQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWV A+K
Sbjct: 116 TVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLAS 175
Query: 171 XXXXXXXXGETN--KRPREANPIS------------SSLACSRLP-ANA-SGFEVAENLP 214
ET KR REA+ S+LA +R+ AN+ SG EV+++LP
Sbjct: 176 LQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLP 235
Query: 215 GEVSTQAVFRCVKVSGIDDSEDQFAY 240
EV++ A+FRCV+VS I++ ED AY
Sbjct: 236 PEVNSPAIFRCVRVSSIEEDEDDQAY 261
Score = 221 (82.9 bits), Expect = 8.3e-25, Sum P(2) = 8.3e-25
Identities = 57/155 (36%), Positives = 81/155 (52%)
Query: 116 GGMSCQDCGNQAKKDCAHMR---CRTCCKSRGFDCQTHVKSTWVAAS---KXXXXXXXXX 169
G + +DC + + C R C+T KS + AS
Sbjct: 129 GNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSASSRETQN 188
Query: 170 XXXXXXXXXGETNKRPREANPISSSLACSRLP-ANA-SGFEVAENLPGEVSTQAVFRCVK 227
G+ N + S+LA +R+ AN+ SG EV+++LP EV++ A+FRCV+
Sbjct: 189 AKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNSPAIFRCVR 248
Query: 228 VSGIDDSEDQ--FAYQTSVNIGGHLFKGILYDQGP 260
VS I++ ED +AYQT+VNIGGH+FKGILYDQGP
Sbjct: 249 VSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGP 283
Score = 79 (32.9 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 316 LDPSSLYPTPFTTFMAAAGTQFFPSPRS 343
LDPSSLYP +F+A GT FF PRS
Sbjct: 321 LDPSSLYPAQLNSFIA--GTPFFTPPRS 346
>TAIR|locus:2053134 [details] [associations]
symbol:SRS4 "AT2G18120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007212
InterPro:IPR007818 InterPro:IPR006511 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623
HOGENOM:HOG000242956 IPI:IPI00516443 PIR:E84560 RefSeq:NP_179404.1
UniGene:At.40042 STRING:Q9SI19 EnsemblPlants:AT2G18120.1
GeneID:816325 KEGG:ath:AT2G18120 TAIR:At2g18120 eggNOG:NOG262123
OMA:PIAKRRE PhylomeDB:Q9SI19 ProtClustDB:CLSN2912875
ArrayExpress:Q9SI19 Genevestigator:Q9SI19 Uniprot:Q9SI19
Length = 222
Score = 345 (126.5 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 70/145 (48%), Positives = 88/145 (60%)
Query: 118 MSCQDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAASKXXXXXXXXXXXXXX-XX 176
+SCQ+CGNQAKK C H RCRTCCKS G C THV+STW+ +K
Sbjct: 70 ISCQECGNQAKKGCTHGRCRTCCKSNGLHCPTHVRSTWIPIAKRRERQQQLQTPTSNPTG 129
Query: 177 XXGETNKRPREANPISSSLACSRLPANASGFEVAEN-LPGEVSTQAVFRCVKVSGIDDSE 235
G K R+ N ++ ++SG E+ E P EVS+ A+FRCV++SG DD E
Sbjct: 130 GSGRVGKY-RDINQHAT--------LDSSGLEMGETRFPDEVSSDALFRCVRMSGTDDGE 180
Query: 236 DQFAYQTSVNIGGHLFKGILYDQGP 260
Q+AYQT+V I GHLFKGILY+QGP
Sbjct: 181 GQYAYQTTVGIAGHLFKGILYNQGP 205
Score = 43 (20.2 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 18 QEDQQHNPANPITPENWFWYK--NEDIS 43
+ED Q N NW WYK N ++S
Sbjct: 16 EEDNQQNT-------NWVWYKHTNNNLS 36
>TAIR|locus:2050074 [details] [associations]
symbol:SRS3 "SHI-related sequence3" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
EMBL:CP002685 EMBL:AC006841 InterPro:IPR007818 InterPro:IPR006511
InterPro:IPR006510 Pfam:PF05142 TIGRFAMs:TIGR01624
TIGRFAMs:TIGR01623 HOGENOM:HOG000242956 IPI:IPI00532088 PIR:G84600
RefSeq:NP_179735.1 UniGene:At.39573 EnsemblPlants:AT2G21400.1
GeneID:816679 KEGG:ath:AT2G21400 TAIR:At2g21400 InParanoid:Q9SJT8
OMA:QTHIKST PhylomeDB:Q9SJT8 ProtClustDB:CLSN2913148
Genevestigator:Q9SJT8 Uniprot:Q9SJT8
Length = 174
Score = 204 (76.9 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 117 GMSCQDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAA 158
G C+DCGNQAKKDC +MRCRTCCKS+ F CQTH+KSTWV A
Sbjct: 6 GRKCEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPA 47
Score = 183 (69.5 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 187 EANPISSSLACSRLPANASGFEVAENLPGEVSTQAVFRCVKVSGIDDSEDQFAYQTSVNI 246
++ P+S+S+ P + P E+S+ A FRCVKVS IDD ++Q+AYQT+VNI
Sbjct: 56 QSQPLSTSI-----PKGVQIHTTPGHFPAELSSLADFRCVKVSSIDDGKEQYAYQTTVNI 110
Query: 247 GGHLFKGILYDQG 259
GGH+F+GIL+DQG
Sbjct: 111 GGHVFRGILHDQG 123
>TAIR|locus:2183078 [details] [associations]
symbol:SRS8 "AT5G33210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 InterPro:IPR007818 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01623 IPI:IPI00529608 RefSeq:NP_198306.1
UniGene:At.55108 EnsemblPlants:AT5G33210.1 GeneID:833279
KEGG:ath:AT5G33210 PhylomeDB:F4KH89 ArrayExpress:F4KH89
Uniprot:F4KH89
Length = 173
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 59/106 (55%), Positives = 70/106 (66%)
Query: 100 SSRSAFMMVRSS-SGIGGGMSCQDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAA 158
+ R+A MM+RS SG GG+SCQD GNQAKKDC+HMRCRTCCKSRGF+C THV+STWV A
Sbjct: 31 AERAAMMMIRSGGSGGSGGVSCQDFGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPA 90
Query: 159 SKXXXXXXXXXXXXXXXXX-XGET-NKRPREANPI-SSSLACSRLP 201
+K GE+ KR RE P SSSL C+R+P
Sbjct: 91 TKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIP 136
>TAIR|locus:2096169 [details] [associations]
symbol:SRS6 "AT3G54430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010073 "meristem maintenance" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132971 InterPro:IPR007818
InterPro:IPR006511 InterPro:IPR006510 Pfam:PF05142
TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623 HOGENOM:HOG000242956
EMBL:AY052675 EMBL:AF446889 IPI:IPI00544080 PIR:T47602
RefSeq:NP_191011.1 UniGene:At.26489 STRING:Q9M2U4
EnsemblPlants:AT3G54430.1 GeneID:824609 KEGG:ath:AT3G54430
TAIR:At3g54430 eggNOG:NOG328229 InParanoid:Q9M2U4 OMA:WIPSSAT
PhylomeDB:Q9M2U4 ProtClustDB:CLSN2915656 Genevestigator:Q9M2U4
Uniprot:Q9M2U4
Length = 183
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 58/156 (37%), Positives = 86/156 (55%)
Query: 105 FMMVRSSSGIGGGMSCQDCGNQAKKDCAHMRCRTCCKSRGFDCQTHVKSTWVAASKXXXX 164
F V ++ +G + C+DCGN+AKK+C RCRTCCKSRG++C THVKSTW+ +S
Sbjct: 27 FAAVEDNNTVGEKV-CRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATRSS 85
Query: 165 XXXXXXXXXXXXXXGETNKRPREANPISSSLACSRLPANASGFEVAENLPGEVSTQAVFR 224
K ++++P + SL + GF E LPG++ AVF+
Sbjct: 86 SSPSERKKKL--------KIDKQSSP-NVSLLPTTTSRQERGFR--EGLPGKIEAPAVFK 134
Query: 225 CVKVSGIDDSED-QFAYQTSVNIGGHLFKGILYDQG 259
+V+ I ++E + YQ +V I GH+FKG L+ G
Sbjct: 135 RTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYG 170
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 344 264 0.00092 114 3 11 22 0.36 34
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 607 (65 KB)
Total size of DFA: 204 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.91u 0.10s 18.01t Elapsed: 00:00:01
Total cpu time: 17.92u 0.10s 18.02t Elapsed: 00:00:01
Start: Sat May 11 03:41:24 2013 End: Sat May 11 03:41:25 2013