BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019214
(344 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|350535032|ref|NP_001234428.1| signal recognition particle 54 kDa protein 2 [Solanum lycopersicum]
gi|1711512|sp|P49972.1|SR542_SOLLC RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|556902|emb|CAA84288.1| 54-kD signal recognition particle (SRP) specific protein [Solanum
lycopersicum]
Length = 499
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/334 (95%), Positives = 332/334 (99%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVR+M TNIKKIV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGKPS++MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAV+GVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMY 334
>gi|255553241|ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
gi|223543295|gb|EEF44827.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
Length = 497
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/334 (96%), Positives = 329/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQAIFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|449468938|ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Cucumis sativus]
Length = 495
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/334 (95%), Positives = 330/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMS+AT+IDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQA+FNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE+CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|224139052|ref|XP_002322968.1| predicted protein [Populus trichocarpa]
gi|222867598|gb|EEF04729.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/334 (95%), Positives = 328/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAELGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQAIFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQE ALFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEVALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|224059270|ref|XP_002299799.1| predicted protein [Populus trichocarpa]
gi|222847057|gb|EEE84604.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/334 (95%), Positives = 328/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IA EGVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDL+IFVMDSSIGQAAFDQAQAFKQ V
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLIIFVMDSSIGQAAFDQAQAFKQMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|449522379|ref|XP_004168204.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Cucumis sativus]
Length = 392
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/334 (95%), Positives = 330/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMS+AT+IDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQA+FNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE+CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|297743482|emb|CBI36349.3| unnamed protein product [Vitis vinifera]
Length = 431
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/334 (94%), Positives = 328/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKK+V
Sbjct: 1 MVLSELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DDLAAGHNKR+IIQQAIF ELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NFDDLAAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAF+QSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAAFDQAQAFRQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|225442910|ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kDa protein 2 [Vitis
vinifera]
Length = 495
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/334 (94%), Positives = 328/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKK+V
Sbjct: 1 MVLSELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DDLAAGHNKR+IIQQAIF ELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NFDDLAAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAF+QSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAAFDQAQAFRQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|356550626|ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 500
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/334 (94%), Positives = 328/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+Q MSNAT+IDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQLMSNATVIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|356526231|ref|XP_003531722.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 1 [Glycine max]
Length = 495
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/334 (94%), Positives = 329/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTLKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 QENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|118487996|gb|ABK95819.1| unknown [Populus trichocarpa]
Length = 495
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/334 (94%), Positives = 326/334 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IA EGVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAAL EEMRQVSEAT PDL+IFVMDSSIGQA FDQAQAFKQ V
Sbjct: 181 KENCDLIIVDTSGRHKQEAALLEEMRQVSEATKPDLIIFVMDSSIGQAPFDQAQAFKQMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|356519296|ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 495
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/334 (94%), Positives = 329/334 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 QENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|356554903|ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 499
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/334 (94%), Positives = 327/334 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNAT+IDEKVLN+CLN ITRALLQ+DVQFKLVR++QTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATVIDEKVLNDCLNVITRALLQSDVQFKLVRDLQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKI EVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 301 SGFMDKIQEVVPMDQQPELLQKLSEGNFTLRIMY 334
>gi|357468165|ref|XP_003604367.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355505422|gb|AES86564.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 496
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/334 (92%), Positives = 323/334 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LGGSI+RA++QMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLADLGGSITRALKQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELC +LDPGKP+FTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCNILDPGKPAFTPKKGKASVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GD
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGQGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFM+KIHEVVPMDQQPELL KL EG FTLRIM+
Sbjct: 301 SGFMNKIHEVVPMDQQPELLNKLQEGTFTLRIMY 334
>gi|226496107|ref|NP_001142208.1| uncharacterized protein LOC100274376 [Zea mays]
gi|194702286|gb|ACF85227.1| unknown [Zea mays]
gi|194707600|gb|ACF87884.1| unknown [Zea mays]
gi|413952289|gb|AFW84938.1| hypothetical protein ZEAMMB73_989437 [Zea mays]
Length = 496
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/334 (91%), Positives = 324/334 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLNECLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNECLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCTMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+GFMDKIHEVVP DQQPELLQKLSEG+FTLR+M+
Sbjct: 301 AGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMY 334
>gi|242054557|ref|XP_002456424.1| hypothetical protein SORBIDRAFT_03g036030 [Sorghum bicolor]
gi|241928399|gb|EES01544.1| hypothetical protein SORBIDRAFT_03g036030 [Sorghum bicolor]
Length = 496
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/334 (91%), Positives = 324/334 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVP DQQPELLQKLSEG+FTLR+M+
Sbjct: 301 SGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMY 334
>gi|1711509|sp|P49971.1|SR541_SOLLC RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|556900|emb|CAA84275.1| 54-kD signal recognition particle (SRP) specific protein [Solanum
lycopersicum]
Length = 496
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/335 (91%), Positives = 326/335 (97%), Gaps = 1/335 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVR+M TNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA++NELCK+LDPGKP+FT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS-YTESDPVRIAVEGVETF 179
YAY+HQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS YTESDPV+IAV+GVETF
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKENCDLIIVDTSGRHKQEAALFEEMRQVSEA PDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQS 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V+VGAVIVTKMDGHAKGGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 241 VAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SG ++KI +VVPMDQQPELLQKLSEG+FTLRIM+
Sbjct: 301 LSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMY 335
>gi|115440231|ref|NP_001044395.1| Os01g0772800 [Oryza sativa Japonica Group]
gi|20160917|dbj|BAB89854.1| putative signal recognition particle 54kD protein [Oryza sativa
Japonica Group]
gi|21743252|dbj|BAC03250.1| putative signal recognition particle 54kD protein [Oryza sativa
Japonica Group]
gi|32879776|dbj|BAC79360.1| signal recognition particle 54kDa subunit [Oryza sativa Japonica
Group]
gi|113533926|dbj|BAF06309.1| Os01g0772800 [Oryza sativa Japonica Group]
gi|215767979|dbj|BAH00208.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619331|gb|EEE55463.1| hypothetical protein OsJ_03626 [Oryza sativa Japonica Group]
Length = 496
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/334 (91%), Positives = 323/334 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL++CLNEI+RALLQ+DVQFK+VR+MQ+NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDVQFKMVRDMQSNIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKPSFTPKKGKP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPSFTPKKGKPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVP DQQPELLQKLSEG FTLR+M+
Sbjct: 301 SGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMY 334
>gi|414880279|tpg|DAA57410.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
Length = 472
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/334 (90%), Positives = 324/334 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTC+K
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+D+FEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEV+P DQQP+LLQKLSEG+F+LR+M+
Sbjct: 301 SGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMY 334
>gi|308080100|ref|NP_001183903.1| uncharacterized protein LOC100502496 [Zea mays]
gi|238015356|gb|ACR38713.1| unknown [Zea mays]
gi|414880280|tpg|DAA57411.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
Length = 494
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/334 (90%), Positives = 324/334 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTC+K
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+D+FEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEV+P DQQP+LLQKLSEG+F+LR+M+
Sbjct: 301 SGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMY 334
>gi|297852530|ref|XP_002894146.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297852532|ref|XP_002894147.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297339988|gb|EFH70405.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297339989|gb|EFH70406.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 496
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/344 (88%), Positives = 329/344 (95%), Gaps = 2/344 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQDSVLN 344
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIM+ L FQ+ +LN
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDL-FQN-ILN 342
>gi|218189132|gb|EEC71559.1| hypothetical protein OsI_03915 [Oryza sativa Indica Group]
Length = 496
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/334 (90%), Positives = 322/334 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL++CLNEI+RALLQ+DVQFK+VR+MQ+NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDVQFKMVRDMQSNIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKPSFTPKKGKP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPSFTPKKGKPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE +DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGERIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFMDKIHEVVP DQQPELLQKLSEG FTLR+M+
Sbjct: 301 SGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMY 334
>gi|18402407|ref|NP_564535.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|21542461|sp|P49967.2|SR543_ARATH RecName: Full=Signal recognition particle 54 kDa protein 3;
Short=SRP54
gi|17386102|gb|AAL38597.1|AF446864_1 At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15450461|gb|AAK96524.1| At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15810010|gb|AAL06932.1| At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|332194242|gb|AEE32363.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
Length = 495
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/344 (88%), Positives = 329/344 (95%), Gaps = 2/344 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQDSVLN 344
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIM+ FQ+ +LN
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYD-QFQN-ILN 342
>gi|227202754|dbj|BAH56850.1| AT1G48900 [Arabidopsis thaliana]
Length = 450
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/344 (88%), Positives = 329/344 (95%), Gaps = 2/344 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQDSVLN 344
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIM+ FQ+ +LN
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQ-FQN-ILN 342
>gi|145324887|ref|NP_001077690.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|332194243|gb|AEE32364.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
Length = 431
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/334 (89%), Positives = 323/334 (96%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIM+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMY 334
>gi|515681|gb|AAA66200.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 304/344 (88%), Positives = 329/344 (95%), Gaps = 2/344 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGGITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKRKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQDSVLN 344
SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIM+ FQ+ +LN
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYD-QFQN-ILN 342
>gi|356526233|ref|XP_003531723.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 2 [Glycine max]
Length = 500
Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust.
Identities = 304/344 (88%), Positives = 318/344 (92%), Gaps = 15/344 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGS-------- 112
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFT KKGKPSV+MFVGLQGS
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTLKKGKPSVVMFVGLQGSYYNVMRFC 120
Query: 113 --GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
G C + KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+
Sbjct: 121 ANGMMIECLCF-----KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVK 175
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
IAVEGVE FK+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAF
Sbjct: 176 IAVEGVERFKQENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAF 235
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
DQAQAFKQSV+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF
Sbjct: 236 DQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 295
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 296 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY 339
>gi|11094805|gb|AAG29734.1|AC084414_2 signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
Length = 522
Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust.
Identities = 303/371 (81%), Positives = 328/371 (88%), Gaps = 29/371 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS------------------ 162
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGRFGLGQYLHISGLKRTSVT 180
Query: 163 ---------YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
YTESDPV+IAVEGV+TFKKENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT
Sbjct: 181 YMFLCPIIHYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATK 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDLVIFVMDSSIGQAAFDQAQAFKQSV+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFI
Sbjct: 241 PDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
GTGEHMDEFEVFDVKPFVSRLLGMGDWSGF+DK+ EVVP DQQPELL+KLS+GNFTLRIM
Sbjct: 301 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIM 360
Query: 334 FSLCFQDSVLN 344
+ FQ+ +LN
Sbjct: 361 YDQ-FQN-ILN 369
>gi|1711511|sp|P49969.1|SR542_HORVU RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|1020002|gb|AAA79355.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
gi|326510077|dbj|BAJ87255.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/334 (85%), Positives = 316/334 (94%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQTNI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKP+FTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SG MDKI +V+P DQQPELL KL+EG FTLR+++
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLY 334
>gi|357133062|ref|XP_003568147.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Brachypodium distachyon]
Length = 498
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 288/334 (86%), Positives = 315/334 (94%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQ NI+KIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQANIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+FNELC MLDPGKP+F PKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIIQQAVFNELCNMLDPGKPAFIPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFV RLLGMGD
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVKRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SG MDKI +V+P DQ PELLQKL+EG FTLR+++
Sbjct: 301 SGLMDKIQDVMPADQHPELLQKLTEGTFTLRLLY 334
>gi|302811179|ref|XP_002987279.1| hypothetical protein SELMODRAFT_158663 [Selaginella moellendorffii]
gi|302815043|ref|XP_002989204.1| hypothetical protein SELMODRAFT_272046 [Selaginella moellendorffii]
gi|300143104|gb|EFJ09798.1| hypothetical protein SELMODRAFT_272046 [Selaginella moellendorffii]
gi|300144914|gb|EFJ11594.1| hypothetical protein SELMODRAFT_158663 [Selaginella moellendorffii]
Length = 491
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 284/334 (85%), Positives = 316/334 (94%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG ISRA+Q+M+NAT+IDEKVL CLNEI+RAL QADVQ K+V+ M TNIKKIV
Sbjct: 1 MVLAELGGRISRALQEMTNATVIDEKVLTACLNEISRALFQADVQLKMVQTMCTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELC MLDPGKPSF+P+KGKPSVIMFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCSMLDPGKPSFSPQKGKPSVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAY++QKKG+KPAL+CADTFRAGAFDQLKQNATKA IPFYGSYTE+DPV+IA EG+ETF+
Sbjct: 121 YAYHYQKKGFKPALICADTFRAGAFDQLKQNATKANIPFYGSYTETDPVKIAQEGLETFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E CDLIIVDTSGRHKQEAALFEEMRQV+ AT+PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 AEKCDLIIVDTSGRHKQEAALFEEMRQVAAATSPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE F+ KPFVSRLLGMGDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFETFETKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+GFMD+I EVVPMDQQPEL+QKL++GNFTLR+M+
Sbjct: 301 AGFMDRIQEVVPMDQQPELIQKLTDGNFTLRLMY 334
>gi|1711508|sp|P49968.1|SR541_HORVU RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|1020000|gb|AAA79354.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 497
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/334 (85%), Positives = 315/334 (94%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQTNI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKP+FT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SG MDKI +V+P DQQPELL KL+EG FTLR+++
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLY 334
>gi|515679|gb|AAA66199.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 281/334 (84%), Positives = 310/334 (92%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I AIQ+M+N TIIDEK LN+CLNEITRALLQ+DV F LV+EMQTNIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGK +F PKK KP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPRVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSYT SDPV+IAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEAT PDLVIFVMDSSIGQ AF+QA+AFKQ+V
Sbjct: 181 KENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG GD
Sbjct: 241 AVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGF++K+ EVVP DQQPELL+ LS G FTLRIM+
Sbjct: 301 SGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMY 334
>gi|18394225|ref|NP_563970.1| Signal recognition particle protein 1 [Arabidopsis thaliana]
gi|586036|sp|P37106.1|SR541_ARATH RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|5103829|gb|AAD39659.1|AC007591_24 Identical to gb|L19997 signal recognition particle 54 kDa subunit
(Srp54-1) from Arabidopsis thaliana. ESTs gb|T88590 and
gb|T20603 come from this gene [Arabidopsis thaliana]
gi|12745001|gb|AAK06880.1|AF344329_1 unknown protein [Arabidopsis thaliana]
gi|304111|gb|AAA19728.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
gi|21592315|gb|AAM64266.1| signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
gi|62320715|dbj|BAD95382.1| putative signal recognition particle 54 kDa subunit [Arabidopsis
thaliana]
gi|332191180|gb|AEE29301.1| Signal recognition particle protein 1 [Arabidopsis thaliana]
Length = 479
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 284/334 (85%), Positives = 311/334 (93%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQM+N TIIDEKVLN+ LNEITRALLQ+DV F LV +MQTNIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR II+QAIF ELC+MLDPGKP+F PKK KPSV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT PDLVIFVMDSSIGQAAF+QA+AFK++V
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SG +DK+ EVVP D Q EL++ LS+GNFTLR M+
Sbjct: 301 SGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMY 334
>gi|357131064|ref|XP_003567163.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Brachypodium distachyon]
Length = 499
Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/334 (84%), Positives = 314/334 (94%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSI+RA+ +MSN T+IDEKV +CLN+ITRALLQADVQFK+V ++Q+NIK++V
Sbjct: 1 MVLAQLGGSITRALAKMSNDTVIDEKVFGDCLNDITRALLQADVQFKMVCDLQSNIKRVV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKR II+QA+F+ELC MLDPGKPSF+PKKG P V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRGIIKQAVFSELCNMLDPGKPSFSPKKGNPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYLESDPVKIAVEGVERFE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLII+DTSGRHKQEAALFEEMRQ+SEAT PDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENYDLIILDTSGRHKQEAALFEEMRQISEATQPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALS+VAATKSPVIF GTGEH+DEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSSVAATKSPVIFTGTGEHIDEFEVFDVKPFVSRLLGMGDW 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGFM+KIHEVVP DQQPE LQKL++ FTLR+M+
Sbjct: 301 SGFMNKIHEVVPADQQPEFLQKLNQKIFTLRLMY 334
>gi|115464807|ref|NP_001056003.1| Os05g0509500 [Oryza sativa Japonica Group]
gi|33235565|dbj|BAC80140.1| signal recognition particle 54kDa subunit [Oryza sativa Japonica
Group]
gi|48475202|gb|AAT44271.1| putative signal recognition particle 54 KD protein (SRP54) [Oryza
sativa Japonica Group]
gi|113579554|dbj|BAF17917.1| Os05g0509500 [Oryza sativa Japonica Group]
gi|215697189|dbj|BAG91183.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632180|gb|EEE64312.1| hypothetical protein OsJ_19149 [Oryza sativa Japonica Group]
Length = 483
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/340 (80%), Positives = 306/340 (90%), Gaps = 1/340 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+ID+K +CL+EI RALLQ+DVQ ++V +M+ NI++ V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQIRMVSDMRANIRRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD L AG NKRRIIQQA+F ELC MLDPGKPSFTP KGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALPAGTNKRRIIQQAVFAELCNMLDPGKPSFTPTKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ KG+KP+LVCADTFRAGAFDQLKQNATKAKIP+YGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKSDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPV+FIGTGEHM +FEVFDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIVTKLDGHAKGGGALSAVAATKSPVVFIGTGEHMQDFEVFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQD 340
SG ++KI + +P DQQPEL+Q+L EG FTLR+ + L FQ+
Sbjct: 301 SGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYEL-FQN 339
>gi|125552939|gb|EAY98648.1| hypothetical protein OsI_20572 [Oryza sativa Indica Group]
Length = 483
Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/340 (80%), Positives = 306/340 (90%), Gaps = 1/340 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+ID+K +CL+EI RALLQ+DVQ ++V +M+ NI++ V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQIRMVSDMRANIRRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD L AG NKRRIIQQA+F ELC MLDPGKPSFTP KGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALPAGTNKRRIIQQAVFAELCNMLDPGKPSFTPTKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ KG+KP+LVCADTFRAGAFDQLKQNATKAKIP+YGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKSDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPV+FIGTGEHM +FEVFDVKPFVSRLLGMGD
Sbjct: 241 SVGAVIVTKLDGHAKGGGALSAVAATKSPVVFIGTGEHMQDFEVFDVKPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQD 340
SG ++KI + +P DQQPEL+Q+L EG FTLR+ + L FQ+
Sbjct: 301 SGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYDL-FQN 339
>gi|242091039|ref|XP_002441352.1| hypothetical protein SORBIDRAFT_09g025050 [Sorghum bicolor]
gi|241946637|gb|EES19782.1| hypothetical protein SORBIDRAFT_09g025050 [Sorghum bicolor]
Length = 482
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/338 (78%), Positives = 308/338 (91%), Gaps = 2/338 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +MSNAT++DEKVL +CLNEI RALLQADV+F+ VR+++ NIK++V
Sbjct: 1 MVLAELGGSIARALSRMSNATVVDEKVLADCLNEICRALLQADVRFETVRDVKANIKRVV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD LAAG NKRRIIQQA+ +E+ +MLDPGKPSFTP KGKP+++MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALAAGTNKRRIIQQAVVDEIRRMLDPGKPSFTPSKGKPNLVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA YH++KG+ PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ F+
Sbjct: 121 YADYHRRKGFNPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDMFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ +FEVF+V PFVSRLLGMGD
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHILDFEVFEVNPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVV-PMDQQPELL-QKLSEGNFTLRIMFSL 336
SG ++KIHEV+ P +Q P ++ +L EG FTLR+++ +
Sbjct: 301 SGLVNKIHEVIMPNNQPPNIIGPQLVEGTFTLRLLYEM 338
>gi|413945975|gb|AFW78624.1| hypothetical protein ZEAMMB73_996048 [Zea mays]
Length = 482
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 269/340 (79%), Positives = 306/340 (90%), Gaps = 1/340 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +MSNAT++DEKVL +CLNEI RALLQADV+F VR+++ NI +IV
Sbjct: 1 MVLAELGGSIARALARMSNATVVDEKVLADCLNEICRALLQADVRFDTVRDVKANINRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD LAAG NKRRIIQQA+ +EL +MLDPGKPSFTP KGKP+V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALAAGTNKRRIIQQAVVDELRRMLDPGKPSFTPSKGKPNVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA YH++KG+ PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ F
Sbjct: 121 YADYHRRKGFNPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDMFM 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKYDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ +FEVF+V PFVSRLLGMGD
Sbjct: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDFEVFEVNPFVSRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQD 340
SG ++KI E +P +QQ +++ KL EG FTLR+++ + FQ+
Sbjct: 301 SGLVNKIQEFMPDNQQMQIMDKLGEGTFTLRLLYEM-FQN 339
>gi|357455285|ref|XP_003597923.1| Signal recognition particle [Medicago truncatula]
gi|355486971|gb|AES68174.1| Signal recognition particle [Medicago truncatula]
Length = 512
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/375 (73%), Positives = 318/375 (84%), Gaps = 34/375 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +M+N T+IDEK L +CLNEI RALLQ+DV+F+L+R+MQ NIK IV
Sbjct: 1 MVLAELGGSITRALHKMNNTTVIDEKALTDCLNEINRALLQSDVRFELIRDMQINIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ---------- 110
NL+ LAAGHNKR+IIQQA+F+ELC+ML+PGKPSF PK+ K SV+MFVGLQ
Sbjct: 61 NLEQLAAGHNKRKIIQQAVFDELCRMLNPGKPSFVPKREKTSVVMFVGLQVPLDWCGFWF 120
Query: 111 -----------GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 159
GSGKTTTCTKYA+ +QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF
Sbjct: 121 YLPAGCQIGVTGSGKTTTCTKYAHCYQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 180
Query: 160 YGS------------YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
YGS Y ESDPV+IAVEGVE FK+E+ DLIIVDTSGRHKQEA+LFEEMRQ
Sbjct: 181 YGSNYYFAVPPFLNSYMESDPVKIAVEGVERFKEEDHDLIIVDTSGRHKQEASLFEEMRQ 240
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+SEAT PDLVIFVMDSSIGQAAF+QAQAFKQ V+VGAVI+TKMDGHAKGGG+LSAVAATK
Sbjct: 241 LSEATKPDLVIFVMDSSIGQAAFNQAQAFKQIVAVGAVIITKMDGHAKGGGSLSAVAATK 300
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SPVIFIGTGEHMD+FEVF+V+PFVSRLLGMGD SG +DKIH VVPMDQQ +L+QKLS+GN
Sbjct: 301 SPVIFIGTGEHMDQFEVFEVQPFVSRLLGMGDLSGLIDKIHGVVPMDQQADLVQKLSKGN 360
Query: 328 FTLRIMFSLCFQDSV 342
FTLRIM+ FQ+++
Sbjct: 361 FTLRIMYEQ-FQNAL 374
>gi|15239909|ref|NP_199761.1| Signal recognition particle SRP54 subunit protein [Arabidopsis
thaliana]
gi|341942066|sp|P49966.2|SR542_ARATH RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|10177616|dbj|BAB10763.1| SRP54 (signal recognition particle 54 KDa) protein [Arabidopsis
thaliana]
gi|332008438|gb|AED95821.1| Signal recognition particle SRP54 subunit protein [Arabidopsis
thaliana]
Length = 497
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/336 (79%), Positives = 298/336 (88%), Gaps = 2/336 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I AIQ+M+N TIIDEK LN+CLNEITRALLQ+DV F LV+EMQTNIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGS--GKTTTC 118
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGK +F PKK KPSV+MFVGLQG K
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSYT SDPV+IAVEGV+
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKKENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEAT PDLVIFVMDSSIGQ AF+QA+AFKQ
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
+V+VGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG G
Sbjct: 241 TVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNG 300
Query: 299 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
D SGF++K+ EVVP DQQPELL+ LS G FTLRIM+
Sbjct: 301 DMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMY 336
>gi|1711514|sp|P49970.1|SR543_HORVU RecName: Full=Signal recognition particle 54 kDa protein 3;
Short=SRP54
gi|1020004|gb|AAA79356.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 493
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/334 (76%), Positives = 298/334 (89%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA +GGSISRA+ MS+A ++DE VL ECLNEI RAL+Q+DV+FK V ++Q NI+K V
Sbjct: 1 MVLADVGGSISRALA-MSSAAVVDESVLRECLNEIARALMQSDVRFKTVCDLQANIRKTV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRII+ ++ ELCKMLD GKP+F PKKGKP+V+MFVGLQGSGKTTTCTK
Sbjct: 60 NLEALAAGTNKRRIIETSVGKELCKMLDTGKPAFVPKKGKPNVVMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 120 YAHYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLEKFR 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E DLII+DTSGRH QEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 180 QEKSDLIIIDTSGRHMQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+F+VF+V+PFV+RLLG GD
Sbjct: 240 SVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDL 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK+ +VP DQQ EL+ KLSEG FTLR+++
Sbjct: 300 PGLIDKMESIVPADQQSELVAKLSEGAFTLRLLY 333
>gi|297849956|ref|XP_002892859.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338701|gb|EFH69118.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 444
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/308 (81%), Positives = 272/308 (88%), Gaps = 12/308 (3%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+N+CLNEITRALLQ+DV F LV+EMQTNIKKIVNLDDLAAGHNKR II+Q
Sbjct: 1 MNDCLNEITRALLQSDVSFPLVKEMQTNIKKIVNLDDLAAGHNKRLIIEQ---------- 50
Query: 88 DPGKPSFTPKKGKPS-VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
+P F PKK KPS V+MFVGLQG+GKTTTCTKYAYYHQKKG+K ALVCADTFRAG FD
Sbjct: 51 -DERPVFAPKKAKPSSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKTALVCADTFRAGVFD 109
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKAKIPFYGSYTESDPV+IA EGV+ FKKE CDLIIVDTSGRHKQEA+L EE+
Sbjct: 110 QLKQNATKAKIPFYGSYTESDPVKIAAEGVDRFKKEKCDLIIVDTSGRHKQEASLCEEIL 169
Query: 207 QVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 266
QV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQ+VSVGAVI+TKMDGHAKGGGALSAVAAT
Sbjct: 170 QVAEATEPDLVIFVMDSSIGQAAFDQAQAFKQTVSVGAVIITKMDGHAKGGGALSAVAAT 229
Query: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 326
KSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDWSG +DK+ EVVP D Q EL++ LS+G
Sbjct: 230 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQHELVENLSQG 289
Query: 327 NFTLRIMF 334
NFTLR M+
Sbjct: 290 NFTLRTMY 297
>gi|255082746|ref|XP_002504359.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226519627|gb|ACO65617.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 512
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 230/338 (68%), Positives = 286/338 (84%), Gaps = 4/338 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG +++ A++++ T++DE+V++ CL E+T+ALLQADV + V +M+ NI K V
Sbjct: 1 MVLGELGSALAGALRKLGEHTVVDEEVMDACLKEVTKALLQADVNVQYVVQMKKNIVKQV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG----KPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG N R+++++A+FNEL ML+ G K F PKKGKP+V+MFVGLQG GKTT
Sbjct: 61 NIQELAAGLNARKLLEKAVFNELVNMLEGGGAEVKEKFVPKKGKPNVVMFVGLQGCGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAY+ QKKG+KPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DP +IA +GV
Sbjct: 121 TCTKYAYHFQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTETDPAKIAADGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK E DLIIVDTSGRHKQE +LFEEMRQV+ A PD+ IFVMDSSIGQAA DQA+AF
Sbjct: 181 ERFKDEKNDLIIVDTSGRHKQEDSLFEEMRQVAAAVQPDMTIFVMDSSIGQAAQDQARAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K +V VG+VI+TK+DGHAKGGGA+SAVAATKSP+ FIGTGEH+DEFE FD KPFVSRLLG
Sbjct: 241 KATVDVGSVIITKLDGHAKGGGAISAVAATKSPIAFIGTGEHIDEFEAFDTKPFVSRLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+GDW+G +DKI++V+PMDQQPEL+ KL G FT+RI++
Sbjct: 301 LGDWTGLIDKINDVIPMDQQPELMDKLVAGQFTMRILY 338
>gi|302761692|ref|XP_002964268.1| hypothetical protein SELMODRAFT_82182 [Selaginella moellendorffii]
gi|300167997|gb|EFJ34601.1| hypothetical protein SELMODRAFT_82182 [Selaginella moellendorffii]
Length = 467
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/339 (69%), Positives = 280/339 (82%), Gaps = 5/339 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ +V+M VGLQG GKTTTCTK
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELRAMLDAGKPSFTPTKGRTNVVMLVGLQGCGKTTTCTK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
DLII+DTSGRHKQE ALFEEMRQ++ ATNPDL+IFVMDSSIGQAA DQA AF++S
Sbjct: 179 DAKHDLIILDTSGRHKQENALFEEMRQLAAATNPDLIIFVMDSSIGQAANDQALAFRESA 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGE D FE F+ K FVSRLLGMGD
Sbjct: 239 KVGAVIITKIDGHAKGGGALSAVAATKSPIIFLGTGEKADAFETFESKAFVSRLLGMGDI 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQ 339
+GF +KI EVVP + QPEL+QKL++GN + + LC Q
Sbjct: 299 AGFANKIKEVVPSELQPELVQKLADGNISFKF---LCDQ 334
>gi|302815721|ref|XP_002989541.1| hypothetical protein SELMODRAFT_129975 [Selaginella moellendorffii]
gi|300142719|gb|EFJ09417.1| hypothetical protein SELMODRAFT_129975 [Selaginella moellendorffii]
Length = 467
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/339 (69%), Positives = 280/339 (82%), Gaps = 5/339 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ + +M VGLQG GKTTTCTK
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELHAMLDAGKPSFTPTKGRTNAVMLVGLQGCGKTTTCTK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
DLII+DTSGRHKQE ALFEEMRQ++ ATNPDL+IFVMDSSIGQAA DQA AF++S
Sbjct: 179 DTKHDLIILDTSGRHKQENALFEEMRQLAAATNPDLIIFVMDSSIGQAANDQALAFRESA 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGE D+FE F+ K FVSRLLGMGD
Sbjct: 239 KVGAVIITKIDGHAKGGGALSAVAATKSPIIFLGTGEKADDFETFESKAFVSRLLGMGDL 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQ 339
+GF +KI EVVP + QPEL+QKL++GN + + LC Q
Sbjct: 299 AGFANKIKEVVPSELQPELVQKLADGNISFKF---LCDQ 334
>gi|303291107|ref|XP_003064840.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226453866|gb|EEH51174.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 513
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/347 (64%), Positives = 285/347 (82%), Gaps = 17/347 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG +++ A++++ T++DE+++ CL E+TRALLQADV + V+ NI K V
Sbjct: 1 MVLGELGTALAGALKKLGEHTVVDEEIMEACLKEVTRALLQADVNVQYVK----NIVKRV 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD-------------PGKPSFTPKKGKPSVIMFV 107
N+++LAAG N R+++++A+F EL ML+ + + PKKG P+V+MFV
Sbjct: 57 NINELAAGLNARKLLEKAVFTELVNMLEGEGAQNAQNEGVTTKREKYAPKKGVPNVVMFV 116
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG GKTTTCTKYA+++QKKG+KPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+D
Sbjct: 117 GLQGCGKTTTCTKYAHHYQKKGFKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTETD 176
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQ 227
P +IA +GVE FK E DLIIVDTSGRHKQE+ALFEEMR V+EA NPD+ IFVMDSSIGQ
Sbjct: 177 PAKIASDGVERFKAEKNDLIIVDTSGRHKQESALFEEMRAVAEAVNPDMTIFVMDSSIGQ 236
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
AA DQA AFK +V VG+V+VTK+DGHAKGGGA+SAVAAT++P++FIGTGEH+DEFE FD
Sbjct: 237 AASDQAAAFKNTVDVGSVVVTKLDGHAKGGGAISAVAATRAPIVFIGTGEHIDEFEAFDA 296
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
KPFVSRLLG+GDW+GF+DKI +V+P DQQPELL KL++G FT+RI++
Sbjct: 297 KPFVSRLLGLGDWTGFIDKIADVIPADQQPELLDKLAQGQFTMRILY 343
>gi|440804234|gb|ELR25111.1| signal peptide binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 496
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/334 (66%), Positives = 279/334 (83%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ MSN+T+ID+ V++ L EI+ AL+ ADVQF LV +++ NI V
Sbjct: 1 MVLAELGSKITHALRNMSNSTVIDKDVVDAMLKEISNALMAADVQFNLVLKLRKNILDKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D+AAG NKR+IIQQA+F+ELC ++DPG+ + KGKP+VIMFVGLQG+GKTTT TK
Sbjct: 61 KIEDMAAGLNKRKIIQQAVFDELCALVDPGQKPYKLVKGKPNVIMFVGLQGAGKTTTVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++++K WK LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV++A EGVE FK
Sbjct: 121 LAYHYKRKSWKACLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKVAEEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQEAALFEEM QV+ A PD V FVMD +IGQAAFDQAQAFKQ V
Sbjct: 181 QEGYEIIIVDTSGRHKQEAALFEEMEQVAAAIKPDTVTFVMDGTIGQAAFDQAQAFKQKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++I+TK+DGHAKGGGALSAVAAT SP+ FIGTGEH+D+FE F V+PFVS++LGMGD
Sbjct: 241 GIGSIIMTKLDGHAKGGGALSAVAATGSPITFIGTGEHIDDFETFAVRPFVSKMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G +D I + VP+D QPEL ++LSEG FTLR M+
Sbjct: 301 AGLVDTIKKAVPLDGQPELYKRLSEGIFTLRDMY 334
>gi|390352988|ref|XP_780650.3| PREDICTED: signal recognition particle 54 kDa protein-like
[Strongylocentrotus purpuratus]
Length = 513
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/334 (67%), Positives = 275/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATIIDE VLN LNEI RALL+ADV +LV+ ++ N+K ++
Sbjct: 1 MVLADLGRKITSALKSLSNATIIDEDVLNSMLNEICRALLEADVNIRLVKALKENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR++IQ A+F EL K++DPG +TP K KP++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRKMIQTAVFKELVKLVDPGVKVWTPTKAKPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYYYQKKGWKVALICADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVIIAADGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE +LFEEM QV+ T+PD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVANVTSPDNIIFVMDASIGQACESQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+FE F KPF+S+LLGMGD
Sbjct: 241 DVASVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK+ E + +D EL+ KL G FTLR M+
Sbjct: 301 EGLIDKVSE-LNLDDNEELINKLKHGEFTLRDMY 333
>gi|405977168|gb|EKC41631.1| Signal recognition particle 54 kDa protein [Crassostrea gigas]
Length = 504
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/334 (66%), Positives = 276/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ + NATII+E+VLNE L EI +AL++ADV KLV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLGNATIINEEVLNEMLKEICKALIEADVNIKLVKSLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLIDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE F+
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEIDPVVIAQEGVEKFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ TNPD ++FVMD+SIGQA QA+AFK V
Sbjct: 181 SENFEIIIVDTSGRHKQEDSLFEEMLQVNNVTNPDNIVFVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH D+FE F V+PFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHTDDFEPFKVQPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D +L++KL +G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEDLMKKLKQGQFTLRDMY 333
>gi|302835417|ref|XP_002949270.1| hypothetical protein VOLCADRAFT_74111 [Volvox carteri f.
nagariensis]
gi|300265572|gb|EFJ49763.1| hypothetical protein VOLCADRAFT_74111 [Volvox carteri f.
nagariensis]
Length = 505
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/337 (68%), Positives = 276/337 (81%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+AI M A IIDEKVL+ L EI ALLQADV K V ++ +KK V
Sbjct: 1 MVLAELGTRISKAISSMGQAMIIDEKVLDTVLKEICTALLQADVNVKQVANLRNGVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG NK+R+I++A+F+ELC MLD P K +KGK +MFVGLQGSGKTT
Sbjct: 61 NIAELAAGLNKQRVIEKAVFDELCDMLDSGVDPKKLELKKEKGKQHTVMFVGLQGSGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAY+++KKGWKPALVCADT+RAGAFDQLKQNATKA+IPFYGSY E+DP IA +GV
Sbjct: 121 TCTKYAYFYKKKGWKPALVCADTYRAGAFDQLKQNATKAQIPFYGSYKETDPAAIAQQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FK++ DLIIVDTSGRHKQEAALFEEM+QV+ A +PDL+IFVMD SIGQAAFDQA+AF
Sbjct: 181 LRFKEDGRDLIIVDTSGRHKQEAALFEEMKQVAAAVSPDLIIFVMDGSIGQAAFDQAKAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K++V VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGEHMD+FE F+ K FV RLLG
Sbjct: 241 KEAVEVGAVIITKLDGHAKGGGALSAVAATKSPIIFLGTGEHMDQFESFETKRFVQRLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
GD SG MDKI +V+P D+QPELL +S+GN T+ ++
Sbjct: 301 KGDVSGLMDKIQDVIPEDKQPELLDTISKGNVTMSVL 337
>gi|307105722|gb|EFN53970.1| hypothetical protein CHLNCDRAFT_31879 [Chlorella variabilis]
Length = 490
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/336 (66%), Positives = 275/336 (81%), Gaps = 2/336 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+A+ ++ ++DE VL+ CL EI ALLQADV +LV ++ N+KK V
Sbjct: 1 MVLAELGQRISQALGSLNAVPVVDEAVLDACLKEIATALLQADVNVRLVANLRNNVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTP-KKGKPSVIMFVGLQGSGKTTTCT 119
N++ LA+G NK+++I++A+F+ELC MLD G P T KKGK +++MFVGLQG+GKTTTCT
Sbjct: 61 NMEQLASGLNKQKVIEKAVFDELCSMLDGGDPKKTELKKGKTNIVMFVGLQGAGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+ +KKG+KPA+VCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DP IA +GV+ F
Sbjct: 121 KYAFLWKKKGFKPAMVCADTFRAGAFDQLKQNATKAQIPFYGSYTETDPAIIAQQGVDRF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKE DLIIVDTSGRHKQE ALFEEMRQV+ A NP VIFVMD SIGQAAFDQA+AF +S
Sbjct: 181 KKEGRDLIIVDTSGRHKQEEALFEEMRQVAAAVNPQHVIFVMDGSIGQAAFDQAKAFHES 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG VI+TK+DGHAKGGGALSAVAAT+SP+ FIGTGEHM EFE F+ + FV RLLG GD
Sbjct: 241 VDVGQVIITKLDGHAKGGGALSAVAATRSPITFIGTGEHMHEFESFETQKFVGRLLGRGD 300
Query: 300 WSGFMDKIHEVVP-MDQQPELLQKLSEGNFTLRIMF 334
W F+DK+ +V+P D Q EL+ K+S+G FTLRIM+
Sbjct: 301 WGSFIDKVKDVIPEEDAQQELIDKISKGEFTLRIMY 336
>gi|346465765|gb|AEO32727.1| hypothetical protein [Amblyomma maculatum]
Length = 518
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/334 (66%), Positives = 277/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ ++
Sbjct: 16 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSVI 75
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++AAG NKRR+IQ A+F EL K++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 76 DIDEMAAGLNKRRMIQSAVFKELIKLVDPGVKAWQPAKGKNNVIMFVGLQGSGKTTTCTK 135
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 136 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFK 195
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++I+VDTSGRHKQE +LFEEM QVS ATNPD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 196 SEGFEIIVVDTSGRHKQEDSLFEEMLQVSNATNPDNIIFVMDASIGQACEAQARAFKEKV 255
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 256 DVGAVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDI 315
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL++KL G FTLR M+
Sbjct: 316 EGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMY 348
>gi|45360609|ref|NP_988977.1| signal recognition particle 54kDa [Xenopus (Silurana) tropicalis]
gi|38174419|gb|AAH61368.1| signal recognition particle 54 [Xenopus (Silurana) tropicalis]
Length = 504
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/334 (65%), Positives = 275/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ +ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCKALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVNIAYEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN +++IVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIVIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|427783877|gb|JAA57390.1| Putative signal recognition particle subunit srp54 [Rhipicephalus
pulchellus]
Length = 503
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/334 (65%), Positives = 275/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++AAG NKRR+IQ A+F EL +++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DIDEMAAGLNKRRMIQSAVFKELIRLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++I+VDTSGRHKQE +LFEEM QVS AT PD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 NEGFEIIVVDTSGRHKQEDSLFEEMLQVSNATKPDNIIFVMDASIGQACESQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVIVTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 241 DVGAVIVTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMY 333
>gi|384250211|gb|EIE23691.1| 54-kd signal recognition particle specific protein [Coccomyxa
subellipsoidea C-169]
Length = 485
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/338 (68%), Positives = 269/338 (79%), Gaps = 4/338 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS+A+ + NA IDEKVL+ CL EI ALLQADV +LV +++ N+K
Sbjct: 1 MVLNELGQKISQALSMIQNAESIDEKVLDACLKEIVTALLQADVNVRLVGKLRDNVKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQGSGKTTT 117
N D AG NKR+II++A+ +EL ML G K KKG+P+VIMFVGLQG+GKTTT
Sbjct: 61 NNADKGAGLNKRKIIEKAVVDELSSMLSSGVDEKKLVDLKKGQPNVIMFVGLQGAGKTTT 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKY Y++KKG+KPALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DP IA +GVE
Sbjct: 121 CTKYGAYYKKKGFKPALVCADTFRAGAFDQLKQNATKMQIPFYGSYTETDPAVIAAKGVE 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKK N DLIIVDTSGRHKQE +LFEEMRQVS T PDL+IFVMD SIGQAA DQA+AFK
Sbjct: 181 EFKKANHDLIIVDTSGRHKQEDSLFEEMRQVSVMTKPDLIIFVMDGSIGQAAEDQAKAFK 240
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V VGAVI+TKMDGHAKGGGALSAVAATKSP++FIGTGEHMDEFE F+ FV RLLG
Sbjct: 241 DTVEVGAVILTKMDGHAKGGGALSAVAATKSPIVFIGTGEHMDEFERFEPNAFVGRLLGR 300
Query: 298 GDWSGFMDKIHEVVPMD-QQPELLQKLSEGNFTLRIMF 334
GDW GF+DKI E VP D + EL+ LS+GNFT+RI++
Sbjct: 301 GDWRGFVDKISEAVPEDAMKEELMDSLSKGNFTMRILY 338
>gi|387916030|gb|AFK11624.1| signal recognition particle protein [Callorhinchus milii]
Length = 504
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/334 (65%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYFQRKGWKSCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVMIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE +LFEEM QVS + PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVSNSIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL+ KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMY 333
>gi|148223543|ref|NP_001080564.1| signal recognition particle 54kDa [Xenopus laevis]
gi|27924197|gb|AAH44991.1| Srp54 protein [Xenopus laevis]
Length = 504
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DLEEMASGLNKRKMIQTAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVNIAYEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN +++IVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIVIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ++ KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEAMIDKLKHGQFTLRDMY 333
>gi|126283547|ref|XP_001363021.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Monodelphis domestica]
gi|334324872|ref|XP_003340575.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Monodelphis domestica]
Length = 504
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/334 (64%), Positives = 274/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|428185212|gb|EKX54065.1| hypothetical protein GUITHDRAFT_159167 [Guillardia theta CCMP2712]
Length = 494
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/334 (66%), Positives = 282/334 (84%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I++A++ M++ T+IDE+ ++ L EI+ ALL +DV KLV ++ N+K +
Sbjct: 1 MVLAELGGRIAQAMRSMTSKTVIDEEAVDNMLKEISSALLSSDVNVKLVSSLRKNVKNRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLA G N+RR+IQQA+F ELC+ML+PGK + PKKGKP+VIMFVGLQGSGKTT+CTK
Sbjct: 61 NLEDLATGLNRRRMIQQAVFEELCEMLNPGKKPYQPKKGKPNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA ++Q+K WK LVC+DTFRAGAFDQLKQNATKA+IPFYGSYTE DPV+IA +GVE FK
Sbjct: 121 YALHYQRKSWKTCLVCSDTFRAGAFDQLKQNATKARIPFYGSYTERDPVKIARDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQEA+LFEEM+Q++ A PD ++FV+DSSIGQAA DQA AFK++V
Sbjct: 181 KEGQEIIIVDTSGRHKQEASLFEEMQQIAAAVEPDDIVFVLDSSIGQAAHDQATAFKEAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVG+VI+TK+DGHAKGGGALSAVAAT SP++FIGTGEH D+FE F+V+ FVSRLLG+GD
Sbjct: 241 SVGSVIMTKLDGHAKGGGALSAVAATSSPIVFIGTGEHFDDFETFEVRSFVSRLLGLGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G M+ I + +D+QPEL QKLS+G FTLR M+
Sbjct: 301 GGLMNAIKD-AGLDKQPELYQKLSQGVFTLRDMY 333
>gi|291223336|ref|XP_002731666.1| PREDICTED: signal recognition particle 54kDa-like [Saccoglossus
kowalevskii]
Length = 492
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/334 (65%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E VLN L+EI RALL+ADV K V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEDVLNSMLSEICRALLEADVNIKQVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKRR+IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRRMIQSAVFKELVKLVDPGVKAWTPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE +LFEEM QVS T+PD VI+VMD++IGQA QA+AFK+ V
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVSNVTSPDNVIYVMDATIGQACESQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F KPFVS+LLGMGD
Sbjct: 241 DVASVIITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEQFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK+ E + +D EL+ KL G ++ M
Sbjct: 301 EGLIDKVSE-LNLDDNEELINKLKHGKKRVQSMI 333
>gi|41055859|ref|NP_957282.1| signal recognition particle 54 kDa protein [Danio rerio]
gi|28277732|gb|AAH45474.1| Signal recognition particle 54 [Danio rerio]
gi|45709065|gb|AAH67588.1| Signal recognition particle 54 [Danio rerio]
gi|182891276|gb|AAI64217.1| Srp54 protein [Danio rerio]
Length = 504
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/334 (65%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 SENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL+ KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMY 333
>gi|442752199|gb|JAA68259.1| Putative signal recognition particle subunit srp54 [Ixodes ricinus]
Length = 503
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/334 (65%), Positives = 274/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ +
Sbjct: 1 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++ AG NKRR+IQ A+F EL K++DPG ++ P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DIDEMGAGLNKRRMIQSAVFKELIKLVDPGVKAWQPTKGKNNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++I+VDTSGRHKQE +LFEEM QVS ATNPD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 SEGFEIIVVDTSGRHKQEDSLFEEMLQVSNATNPDNIIFVMDASIGQACESQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVIVTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 241 DVGAVIVTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMY 333
>gi|348539542|ref|XP_003457248.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Oreochromis niloticus]
Length = 504
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +D+++E + +D EL+ KL G FTLR M+
Sbjct: 301 EGLIDRVNE-LKLDDNEELIDKLKHGQFTLRDMY 333
>gi|432937583|ref|XP_004082449.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Oryzias latipes]
Length = 385
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +D+++E + +D EL+ KL G FTLR M+
Sbjct: 301 EGLIDRVNE-LKLDDNEELIDKLKHGQFTLRDMY 333
>gi|31981338|ref|NP_036029.2| signal recognition particle 54 kDa protein [Mus musculus]
gi|153791789|ref|NP_001093579.1| signal recognition particle 54 kDa protein [Mus musculus]
gi|73622264|sp|P14576.2|SRP54_MOUSE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|12848354|dbj|BAB27921.1| unnamed protein product [Mus musculus]
gi|18043829|gb|AAH19683.1| Signal recognition particle 54a [Mus musculus]
gi|74193669|dbj|BAE22786.1| unnamed protein product [Mus musculus]
Length = 504
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|198432537|ref|XP_002131641.1| PREDICTED: similar to signal recognition particle 54 [Ciona
intestinalis]
Length = 497
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/334 (65%), Positives = 274/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VL L+EI RALL++DV +LV++++ N++ +
Sbjct: 1 MVLADLGRKINNALRSLSNATIINEEVLQSMLSEICRALLESDVNIRLVKKLRENVRSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A+G NKR++IQ A+F EL K++DPG ++ P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMASGLNKRKMIQSAVFRELVKLVDPGVKAWQPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+K WK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVETFK
Sbjct: 121 LAYYYQRKNWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEADPVVIASEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+EN ++IIVDTSGRHKQE +LFEEM QV A PD VIFVMD+SIGQA QA+AFK+ V
Sbjct: 181 EENFEIIIVDTSGRHKQEDSLFEEMLQVYNAVAPDNVIFVMDASIGQACEGQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE+F +PFV +LL MGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEMFKTQPFVRKLLNMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELLDKLKHGQFTLRDMY 333
>gi|321462130|gb|EFX73155.1| hypothetical protein DAPPUDRAFT_325390 [Daphnia pulex]
Length = 506
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 271/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL++DV +LV++++ N+K ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNAMLKEICAALLESDVNIRLVKQLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYMKKGWKSCLVCADTFRAGAYDQLKQNATKARIPFYGSYTEVDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN + I+VDTSGRHKQE +LFEEM QVS A PD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 AENFEFIVVDTSGRHKQEDSLFEEMLQVSNAVKPDNIIFVMDASIGQACEAQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT+SPVIFIGTGEH+D+ E F KPF+S+LLG+GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATQSPVIFIGTGEHIDDLESFKTKPFISKLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL++K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMY 333
>gi|4507215|ref|NP_003127.1| signal recognition particle 54 kDa protein isoform 1 [Homo sapiens]
gi|50979080|ref|NP_001003272.1| signal recognition particle 54 kDa protein [Canis lupus familiaris]
gi|84000369|ref|NP_001033290.1| signal recognition particle 54 kDa protein [Bos taurus]
gi|197103004|ref|NP_001126912.1| signal recognition particle 54 kDa protein [Pongo abelii]
gi|386780792|ref|NP_001247781.1| signal recognition particle 54 kDa protein [Macaca mulatta]
gi|114652592|ref|XP_001136048.1| PREDICTED: signal recognition particle 54 kDa protein isoform 5
[Pan troglodytes]
gi|149410337|ref|XP_001511597.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Ornithorhynchus anatinus]
gi|149692831|ref|XP_001491075.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Equus caballus]
gi|296214799|ref|XP_002753859.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Callithrix jacchus]
gi|301774887|ref|XP_002922872.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Ailuropoda melanoleuca]
gi|332229141|ref|XP_003263750.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Nomascus leucogenys]
gi|335292471|ref|XP_001927834.3| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Sus scrofa]
gi|344274150|ref|XP_003408881.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Loxodonta africana]
gi|395838229|ref|XP_003792021.1| PREDICTED: signal recognition particle 54 kDa protein [Otolemur
garnettii]
gi|397501115|ref|XP_003821240.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Pan paniscus]
gi|402875937|ref|XP_003901747.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Papio anubis]
gi|410048161|ref|XP_003952519.1| PREDICTED: signal recognition particle 54 kDa protein [Pan
troglodytes]
gi|426248376|ref|XP_004017939.1| PREDICTED: signal recognition particle 54 kDa protein [Ovis aries]
gi|46577649|sp|P61010.1|SRP54_CANFA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|46577650|sp|P61011.1|SRP54_HUMAN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|68731680|sp|Q5R4R6.1|SRP54_PONAB RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|73621949|sp|Q4R965.1|SRP54_MACFA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|122142857|sp|Q2T9U1.1|SRP54_BOVIN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|119390387|pdb|2J37|W Chain W, Model Of Mammalian Srp Bound To 80s Rncs
gi|930|emb|CAA34385.1| unnamed protein product [Canis lupus familiaris]
gi|784999|emb|CAA60132.1| SRP 54 [Homo sapiens]
gi|1256820|gb|AAC50994.1| signal recognition particle [Homo sapiens]
gi|12653733|gb|AAH00652.1| Signal recognition particle 54kDa [Homo sapiens]
gi|13097267|gb|AAH03389.1| Signal recognition particle 54kDa [Homo sapiens]
gi|55733132|emb|CAH93250.1| hypothetical protein [Pongo abelii]
gi|67967747|dbj|BAE00356.1| unnamed protein product [Macaca fascicularis]
gi|83405301|gb|AAI11271.1| Signal recognition particle 54kDa [Bos taurus]
gi|90076082|dbj|BAE87721.1| unnamed protein product [Macaca fascicularis]
gi|90076300|dbj|BAE87830.1| unnamed protein product [Macaca fascicularis]
gi|177771971|gb|ACB73260.1| signal recognition particle (predicted) [Rhinolophus ferrumequinum]
gi|189053540|dbj|BAG35706.1| unnamed protein product [Homo sapiens]
gi|296475353|tpg|DAA17468.1| TPA: signal recognition particle 54 kDa protein [Bos taurus]
gi|325464281|gb|ADZ15911.1| signal recognition particle 54kDa [synthetic construct]
gi|351700055|gb|EHB02974.1| Signal recognition particle 54 kDa protein [Heterocephalus glaber]
gi|355693216|gb|EHH27819.1| hypothetical protein EGK_18109 [Macaca mulatta]
gi|355778517|gb|EHH63553.1| hypothetical protein EGM_16545 [Macaca fascicularis]
gi|380815890|gb|AFE79819.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|383421049|gb|AFH33738.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|384948994|gb|AFI38102.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|410210342|gb|JAA02390.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410264744|gb|JAA20338.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410294232|gb|JAA25716.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410353847|gb|JAA43527.1| signal recognition particle 54kDa [Pan troglodytes]
gi|417402010|gb|JAA47866.1| Putative signal recognition particle subunit srp54 [Desmodus
rotundus]
gi|440909283|gb|ELR59207.1| Signal recognition particle 54 kDa protein [Bos grunniens mutus]
gi|226429|prf||1512310A SRP protein 54kD
Length = 504
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|291403728|ref|XP_002718183.1| PREDICTED: signal recognition particle 54kDa isoform 1 [Oryctolagus
cuniculus]
Length = 504
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|209153928|gb|ACI33196.1| Signal recognition particle 54 kDa protein [Salmo salar]
Length = 504
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ ++F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 241 EVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL+ KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMY 333
>gi|354498655|ref|XP_003511430.1| PREDICTED: signal recognition particle 54 kDa protein, partial
[Cricetulus griseus]
Length = 385
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|410898714|ref|XP_003962842.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Takifugu rubripes]
Length = 504
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 MENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +D++++ + +D EL+ KL G FTLR M+
Sbjct: 301 EGLIDRVND-LKLDDNEELIDKLKHGQFTLRDMY 333
>gi|320167917|gb|EFW44816.1| signal recognition particle containing protein [Capsaspora
owczarzaki ATCC 30864]
Length = 512
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/334 (64%), Positives = 274/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ M+ + +IDE+VL+ L EI ALL+ADV KLV +++T++K V
Sbjct: 1 MVLADLGRKITGALRNMTASAVIDEEVLDAMLKEICTALLEADVNVKLVMKLRTSVKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D++AAG NK+R+IQ+A+++ELC+++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFDEMAAGLNKKRVIQKAVYDELCRLVDPGIAPYKPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVE FK
Sbjct: 121 LAYYYHKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEADPVLIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQEA+LFEEM Q+S+A +P VIFV+D++IGQAA QAQAFK +V
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQISKAVDPQNVIFVLDATIGQAALGQAQAFKATV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEHM++FE F+ K F+ +LLGMGD
Sbjct: 241 DVGSVIMTKLDGHAKGGGALSAVAATQSPIIFIGTGEHMEDFERFETKAFIGKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G M+ + + + +D ELL KL G F+LR M+
Sbjct: 301 GGLMEVVQD-LKLDNNKELLTKLQAGVFSLRDMY 333
>gi|386697145|gb|AFJ22033.1| signal recognition particle protein 54k, partial [Procalvolia sp.
AD1231]
Length = 453
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 269/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV +LV++++ N++K+++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALLESDVNIRLVKQLRENVRKVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKPWQPVKGRPNVVMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFIDENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEAFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ ELL+KL G FTLR M+
Sbjct: 303 -LKLEDNEELLEKLKHGEFTLRDMY 326
>gi|62899020|ref|NP_446323.1| signal recognition particle 54 kDa protein [Rattus norvegicus]
gi|73621950|sp|Q6AYB5.1|SRP54_RAT RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|50925703|gb|AAH79117.1| Signal recognition particle 54a [Rattus norvegicus]
Length = 504
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|197631999|gb|ACH70723.1| signal recognition particle 54 [Salmo salar]
gi|209154348|gb|ACI33406.1| Signal recognition particle 54 kDa protein [Salmo salar]
Length = 504
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSSI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ ++F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 241 EVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL+ KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMY 333
>gi|410962045|ref|XP_003987587.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Felis catus]
Length = 526
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 23 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 82
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 83 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 142
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 143 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 202
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 203 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 262
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 263 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 322
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 323 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 355
>gi|54194|emb|CAA34386.1| unnamed protein product [Mus musculus]
Length = 504
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEE QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEERLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|156407984|ref|XP_001641637.1| predicted protein [Nematostella vectensis]
gi|156228776|gb|EDO49574.1| predicted protein [Nematostella vectensis]
Length = 498
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/334 (63%), Positives = 275/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L E+ ALL++DV +LV+ ++ N+K +
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEEVLNAMLKEVCAALLESDVNVQLVKRLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKR++IQ +F ELCK++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DFEEMAAGLNKRKMIQHTVFQELCKLVDPGVKAWTPSKGKKNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVIIAQEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+EN ++IIVDTSGRHKQE +LFEEM QVS A +PD +IFVMD++IGQA Q++AFK+ V
Sbjct: 181 EENFEIIIVDTSGRHKQEESLFEEMLQVSNAVSPDNIIFVMDATIGQACESQSRAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEQFKTRPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + ++ EL+ KL G F+LR M+
Sbjct: 301 EGLIDKVNE-LKLEDNEELIDKLKHGVFSLRDMY 333
>gi|153791464|ref|NP_001093580.1| signal recognition particle 54C [Mus musculus]
Length = 504
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++K G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMY 333
>gi|410962043|ref|XP_003987586.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Felis catus]
Length = 504
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|332024403|gb|EGI64601.1| Signal recognition particle 54 kDa protein [Acromyrmex echinatior]
Length = 506
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 274/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++K++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRKVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGINKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMY 333
>gi|355721868|gb|AES07403.1| signal recognition particle 54kDa [Mustela putorius furo]
Length = 502
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/333 (64%), Positives = 272/333 (81%), Gaps = 1/333 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
VLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K ++
Sbjct: 1 VLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAID 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 LEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 AYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKN 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 ENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 VASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIE 300
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 GLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 332
>gi|47214799|emb|CAF89626.1| unnamed protein product [Tetraodon nigroviridis]
Length = 514
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/334 (64%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +D++++ + +D +L+ KL G FTLR M+
Sbjct: 301 EGLIDRVND-LKLDDNEDLINKLKHGQFTLRDMY 333
>gi|13542673|gb|AAH05543.1| Srp54c protein [Mus musculus]
Length = 500
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 271/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDNFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++K G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMY 333
>gi|343960623|dbj|BAK61901.1| signal recognition particle 54 kDa protein [Pan troglodytes]
Length = 504
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LASYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDNNEALIEKLKHGQFTLRDMY 333
>gi|386697073|gb|AFJ21997.1| signal recognition particle protein 54k, partial [Ctenacarus sp. 1
PBK-2011]
Length = 460
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/322 (65%), Positives = 267/322 (82%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+E+VL E L ++TRALL+ADV KLV+ ++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINEEVLEELLKQVTRALLEADVNIKLVKTLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++ P K + +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWQPAKNRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KE ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIANEGVEQFTKEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S T PDL+I+VMD+SIGQA QA+AFK V VGAVIVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISTTTQPDLIIYVMDASIGQACEGQARAFKGKVDVGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 242 HARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FTLR M+
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMY 322
>gi|110763770|ref|XP_624497.2| PREDICTED: signal recognition particle 54 kDa protein-like [Apis
mellifera]
Length = 498
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMY 333
>gi|348572227|ref|XP_003471895.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 54 kDa
protein-like [Cavia porcellus]
Length = 504
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NK ++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKXKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|50748422|ref|XP_421238.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Gallus gallus]
gi|224051427|ref|XP_002200552.1| PREDICTED: signal recognition particle 54 kDa protein [Taeniopygia
guttata]
Length = 504
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/334 (63%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|386697093|gb|AFJ22007.1| signal recognition particle protein 54k, partial [Camisia segnis]
Length = 464
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 271/325 (83%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I++A++ + NATII+++VL+ L EI +ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITQALRSLGNATIINKEVLDGLLKEICKALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACESQARAFKNKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697565|gb|AFJ22243.1| signal recognition particle protein 54k, partial [Xolalges sp. n.
AD600]
Length = 453
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELCKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697147|gb|AFJ22034.1| signal recognition particle protein 54k, partial
[Thalassophagacarus faime]
Length = 453
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 269/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALLESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKPWQPVKGRPNVVMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +N +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFIDDNFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +++ ELL+KL G FTLR M+
Sbjct: 303 -LKLEENGELLEKLKHGEFTLRDMY 326
>gi|449274766|gb|EMC83844.1| Signal recognition particle 54 kDa protein, partial [Columba livia]
Length = 500
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/334 (63%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|307199091|gb|EFN79801.1| Signal recognition particle 54 kDa protein [Harpegnathos saltator]
Length = 506
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 274/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMY 333
>gi|452824083|gb|EME31088.1| signal recognition particle subunit SRP54 [Galdieria sulphuraria]
Length = 482
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 279/334 (83%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LG IS A+++++N T++DE+ LNE LNE++RALL+ADV K+V+ ++ ++KK V
Sbjct: 1 MVLSELGKKISGALRKLANRTVVDEEALNEMLNEVSRALLEADVNVKMVQALRQSVKKKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++LAAG N+R++IQ+A+F ELC ML PG KKG+P+V+MFVGLQG+GKTTTC K
Sbjct: 61 NLEELAAGVNRRKLIQKAVFEELCNMLSPGTSPPPLKKGRPNVVMFVGLQGNGKTTTCVK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KGWK ALVCADTFRAGAFDQLKQ+ATKA++PFYGS+TE+D V++A EGV+ F+
Sbjct: 121 YAYYHQRKGWKTALVCADTFRAGAFDQLKQSATKARVPFYGSHTETDAVKVAREGVDLFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE +LIIVDTSGRHKQ+ ALFEEM Q+++A P+ +IFVMD ++GQ+ +DQA AF+Q V
Sbjct: 181 KEKYELIIVDTSGRHKQDTALFEEMEQIAQAVQPNSIIFVMDGTMGQSVYDQALAFRQRV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+V+VTK+DGHAKGGGALSAV+ATKSPV+FIGTGE +D+ E F + FV RLLG+GD
Sbjct: 241 NVGSVVVTKLDGHAKGGGALSAVSATKSPVVFIGTGEMLDDLEPFAPQSFVQRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SGF++ + E +DQ P++L+++ EG TLR ++
Sbjct: 301 SGFVNAVKE-AGVDQNPDILKRIQEGVLTLRDLY 333
>gi|387018700|gb|AFJ51468.1| signal recognition particle 54A [Crotalus adamanteus]
Length = 456
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/334 (63%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTT+C+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQKKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDVEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|386697075|gb|AFJ21998.1| signal recognition particle protein 54k, partial [Liochthonius sp.
AD1300]
Length = 464
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 270/325 (83%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKTLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P+KG+ +++MFVGLQGSGKTTTCTK AYY+Q+KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPQKGRTNIVMFVGLQGSGKTTTCTKMAYYYQRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEVLIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S+A P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISQAVQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697409|gb|AFJ22165.1| signal recognition particle protein 54k, partial [Laminosioptidae
gen. sp. AD884]
Length = 464
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQETSLFEEMMAIQSAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|294950295|ref|XP_002786558.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239900850|gb|EER18354.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 533
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/332 (66%), Positives = 276/332 (83%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A++++ AT+IDE VL+ECL EI+ ALLQADV + V E++ NIK+ V
Sbjct: 1 MVLADLGKQISGALRKLGKATVIDEAVLDECLKEISTALLQADVNVRYVAELRKNIKRTV 60
Query: 61 NLDDLAA-GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+L++LAA G NK+R+IQ+A+ N+L +ML P K + PKKG+P+VIMFVGLQGSGKTT+CT
Sbjct: 61 DLEELAAPGSNKQRVIQKAVVNQLVEMLSPDKEPYKPKKGQPNVIMFVGLQGSGKTTSCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK KIPFYGSY ESDPV+IA EGV+ F
Sbjct: 121 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVKIPFYGSYVESDPVKIAKEGVDLF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDTSGRH+QEAALF+EM QV++A NPD ++FVMDS IGQA F+QA+AFK +
Sbjct: 181 KMDKYDIIIVDTSGRHRQEAALFDEMTQVAKAVNPDEIVFVMDSHIGQACFEQAKAFKDT 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
VSVG+V+VTK+DGHAKGGGALSAVAAT SP+IFIGTGEH DEFE FD + FV RLLG+GD
Sbjct: 241 VSVGSVVVTKLDGHAKGGGALSAVAATDSPIIFIGTGEHFDEFEPFDAQSFVQRLLGLGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G M I E +P+D+Q +L+ ++ G F+LR
Sbjct: 301 IKGLMSTIGEAMPLDKQGDLMARMQSGQFSLR 332
>gi|26354843|dbj|BAC41048.1| unnamed protein product [Mus musculus]
Length = 502
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/334 (63%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G N+R++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNQRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNAT+A+IPFYGSYTE DPV IA EGVE F+
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATQARIPFYGSYTEMDPVIIASEGVEKFQ 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRH+QE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHQQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDNFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++K G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMY 333
>gi|340371045|ref|XP_003384056.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Amphimedon queenslandica]
Length = 501
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/334 (64%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+V+ L EI ALL+ADV KLV ++ N++ +
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEEVVQAMLKEICTALLEADVNVKLVGRLRQNVRDAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKR+IIQ ++FNELC+++DPG P++T KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEEMAAGLNKRKIIQSSVFNELCRLIDPGVPAWTATKGKQNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA+EGVE FK
Sbjct: 121 LAYHYQHKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAMEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+N ++IIVDTSGRHKQE +LFEEM QVS+A NPD +I+VMD++IGQA QA+AFK V
Sbjct: 181 ADNFEIIIVDTSGRHKQEESLFEEMLQVSQAINPDNIIYVMDATIGQACESQARAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+ FIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATESPITFIGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK+ E + +D+ EL++KL G FTLR M+
Sbjct: 301 QGLVDKVSE-LGLDENEELVKKLQHGEFTLRDMY 333
>gi|386697407|gb|AFJ22164.1| signal recognition particle protein 54k, partial [Calamicoptes sp.
AD1253]
Length = 464
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFKKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQETSLFEEMMAIQSAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|383847489|ref|XP_003699385.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Megachile rotundata]
Length = 506
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+ +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMY 333
>gi|66362756|ref|XP_628344.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
gi|46229785|gb|EAK90603.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
Length = 515
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 266/334 (79%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LGG ++ AI++ ++TI DE ++ CL EI ALL+ADV KLV +++ NIKK V
Sbjct: 16 MVLADLGGQLASAIRKFQSSTIADEAAIDLCLKEIATALLKADVNVKLVAQLRNNIKKAV 75
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D G N+RR IQ A+ EL +L P + + P++ K +VI+FVGLQGSGKTTTCTK
Sbjct: 76 EQEDSVGGSNRRRQIQSAVVEELVNILTPSRTPYVPQRDKSNVIVFVGLQGSGKTTTCTK 135
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A Y+Q++GWK ALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV+IA +GV F+
Sbjct: 136 FANYYQRRGWKTALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVKIARDGVREFR 195
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE++LF EM QV TNPD V+FVMDS IGQA +DQA AF +V
Sbjct: 196 KEGYDLIIVDTSGRHKQESSLFVEMEQVVMETNPDDVVFVMDSHIGQACYDQAMAFCNAV 255
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT +P+IFIGTGEH DEFE F+ K FVSRLLG+GD
Sbjct: 256 DVGSVIITKLDGHAKGGGALSAVAATGAPIIFIGTGEHFDEFEPFETKGFVSRLLGLGDI 315
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SG M KI+EVVP+D+QP+++ +L +G FTLR M+
Sbjct: 316 SGLMAKINEVVPLDRQPDMVNRLVQGIFTLRDMY 349
>gi|226430|prf||1512311A SRP protein 54kD
Length = 504
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/334 (64%), Positives = 270/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+A+ KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEAEFNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEE QVS A PD +++VMDS IGQA QA+AFK V
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEERLQVSNAIQPDNIVYVMDSDIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 333
>gi|307183983|gb|EFN70554.1| Signal recognition particle 54 kDa protein [Camponotus floridanus]
Length = 506
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 274/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTT+CTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMY 333
>gi|340722086|ref|XP_003399441.1| PREDICTED: signal recognition particle 54 kDa protein-like [Bombus
terrestris]
Length = 506
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DP ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPRVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMY 333
>gi|386697157|gb|AFJ22039.1| signal recognition particle protein 54k, partial [Hyadesia aff.
curassaviensis AD605]
Length = 453
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACESQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|380028787|ref|XP_003698068.1| PREDICTED: uncharacterized protein LOC100872792 [Apis florea]
Length = 1038
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 273/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMY 333
>gi|350423805|ref|XP_003493597.1| PREDICTED: signal recognition particle 54 kDa protein-like [Bombus
impatiens]
Length = 506
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DP ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPRVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAIQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMY 333
>gi|386697095|gb|AFJ22008.1| signal recognition particle protein 54k, partial [Malaconothrus
gracilis]
Length = 464
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 269/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KGK +V+MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGKTNVVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACEGQARAFKNKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|196016017|ref|XP_002117863.1| signal recognition particle 54 [Trichoplax adhaerens]
gi|190579532|gb|EDV19625.1| signal recognition particle 54 [Trichoplax adhaerens]
Length = 505
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 275/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ +SNATII+E+V+ L EI ALL++DV +LV+ ++ N++ +
Sbjct: 1 MVLAELGRKITDALRSLSNATIINEEVVQALLKEICAALLESDVNVQLVKRLRENVRAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKRRI+Q+A+FNELCK++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEEMAAGLNKRRILQRAVFNELCKLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+Q+KGWK L+CADTFRAGAFDQLKQN+TKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 MAHYYQRKGWKTCLICADTFRAGAFDQLKQNSTKARIPFYGSYTEMDPVVIAHDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE +LFEEM Q+S PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQLSNTITPDNIIFVMDATIGQACEAQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+DGHAKGGG+LSAVAAT+SP+IFIGTGEH+++FE F +PF+S+LLGMGD
Sbjct: 241 DVASVIITKLDGHAKGGGSLSAVAATRSPIIFIGTGEHIEDFEQFKTRPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK+ E + +D+ EL++KL G FTLR M+
Sbjct: 301 EGLIDKVTE-LKLDENEELIEKLKHGQFTLRDMY 333
>gi|386697405|gb|AFJ22163.1| signal recognition particle protein 54k, partial [Rallicoptes aff.
gallinulae AD992]
Length = 460
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/322 (65%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQETSLFEEMMAIQSAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|386697691|gb|AFJ22306.1| signal recognition particle protein 54k, partial [Schizocarpus sp.
F nr. subvirgulatus AD1262]
Length = 464
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE+ LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESXLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697559|gb|AFJ22240.1| signal recognition particle protein 54k, partial [Alloptes
calidridis]
Length = 464
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697413|gb|AFJ22167.1| signal recognition particle protein 54k, partial [Metanalges sp.
AD900]
Length = 448
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/322 (65%), Positives = 265/322 (82%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+Q+DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIQSDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+FNEL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFNELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFIKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|386697201|gb|AFJ22061.1| signal recognition particle protein 54k, partial [Horstia sp.
AD301]
Length = 453
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + N+TII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNSTIINQEVLDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+FNEL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFNELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATGSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697417|gb|AFJ22169.1| signal recognition particle protein 54k, partial [Megniniella sp.
AD966]
Length = 449
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 267/322 (82%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+QADV LV++++ N++K+++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIQADVNIVLVKQLRENVRKVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+FNEL ++LDPG ++ P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFNELVRLLDPGVKTWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKEKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
++ EL++KL G FT+R M+
Sbjct: 301 LENNEELIEKLKHGEFTIRDMY 322
>gi|386697337|gb|AFJ22129.1| signal recognition particle protein 54k, partial [Coraciacarus
americanus]
Length = 453
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|339239467|ref|XP_003381288.1| signal recognition protein [Trichinella spiralis]
gi|316975692|gb|EFV59096.1| signal recognition protein [Trichinella spiralis]
Length = 492
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/334 (64%), Positives = 269/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +S+ATII+E+VL L E+ ALL+ADV +LV++++ ++K +
Sbjct: 1 MVLAELGRKIRNAIGSLSHATIINEEVLTSMLKEVCTALLEADVNIRLVKQLRESVKSQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+++AAG NKRR+IQ+ +F EL K++DPG + P KG+P+VIMFVGLQG GKTTTCTK
Sbjct: 61 NLEEMAAGMNKRRLIQRVVFQELVKLVDPGVKQWQPTKGRPNVIMFVGLQGCGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QK+G K L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQKRGMKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+EN ++IIVDTSGRHKQE +LFEEM QV+ PD VI+VMD+SIGQA QA+AF + V
Sbjct: 181 QENFEIIIVDTSGRHKQEESLFEEMLQVANTVQPDNVIYVMDASIGQACEAQARAFHEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHA+GGGALSAVAAT SP+IFIGTGEH+D+FE F VKPFV +LLGMGD
Sbjct: 241 DVASVIVTKLDGHARGGGALSAVAATGSPIIFIGTGEHIDDFEPFKVKPFVQKLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D+ +LL+KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLDENDQLLEKLKHGQFTLRDMY 333
>gi|386697203|gb|AFJ22062.1| signal recognition particle protein 54k, partial [Horstia sp.
AD1229]
Length = 464
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + N+TII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNSTIINQEVLDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+FNEL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFNELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATGSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697569|gb|AFJ22245.1| signal recognition particle protein 54k, partial [Ingrassia sp.
AD1008]
Length = 464
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA GVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASGGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIEPDLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697411|gb|AFJ22166.1| signal recognition particle protein 54k, partial [Metanalges sp.
AD874]
Length = 452
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+Q+DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIQSDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFYELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697177|gb|AFJ22049.1| signal recognition particle protein 54k, partial [Canestrinia sp.
n. AD775]
Length = 464
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA +QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACENQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697495|gb|AFJ22208.1| signal recognition particle protein 54k, partial [Euroglyphus
maynei]
Length = 464
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKSWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697693|gb|AFJ22307.1| signal recognition particle protein 54k, partial [Schizocarpus sp.
E nr. subvirgulatus AD1267]
Length = 464
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697173|gb|AFJ22047.1| signal recognition particle protein 54k, partial [Afrocanestrinia
sp. n. AD456]
Length = 464
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697443|gb|AFJ22182.1| signal recognition particle protein 54k, partial [Heteropsorus sp.
AD840]
Length = 464
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELMEKLKHGEFTIRDMY 326
>gi|386697441|gb|AFJ22181.1| signal recognition particle protein 54k, partial [Heteropsorus sp.
AD869]
Length = 464
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELMEKLKHGEFTIRDMY 326
>gi|386697069|gb|AFJ21995.1| signal recognition particle protein 54k, partial [Alicorhagia sp.
AD1316]
Length = 464
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINKEVLDGLLKEICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+P+++MFVGLQGSGKTTTCTK +YY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRPNIVMFVGLQGSGKTTTCTKMSYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++I+V
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAQEGVEKFTNEGFEIIVV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S P+L+IFVMD+SIGQA QA+AF V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNTVQPNLIIFVMDASIGQACESQAKAFSSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATGSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D+ EL++KL G FTLR M+
Sbjct: 303 -LKLDENEELIEKLKHGEFTLRDMY 326
>gi|386697563|gb|AFJ22242.1| signal recognition particle protein 54k, partial [Xolalgoides sp.
AD649]
Length = 453
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICAALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVQAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697587|gb|AFJ22254.1| signal recognition particle protein 54k, partial [Proctophyllodes
ampelidis]
gi|386697599|gb|AFJ22260.1| signal recognition particle protein 54k, partial [Proctophyllodes
canadensis]
Length = 453
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697615|gb|AFJ22268.1| signal recognition particle protein 54k, partial [Platyacarus sp.
n. AD1155]
Length = 463
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697613|gb|AFJ22267.1| signal recognition particle protein 54k, partial [Platyacarus sp.
AD1238]
Length = 464
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697307|gb|AFJ22114.1| signal recognition particle protein 54k, partial [Aniibius
drepanophorus]
Length = 464
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICMALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697631|gb|AFJ22276.1| signal recognition particle protein 54k, partial [Montesauria sp.
n. AD617]
Length = 453
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697421|gb|AFJ22171.1| signal recognition particle protein 54k, partial [Diplaegidia sp. A
PBK-2011]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+E L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDELLKEICAALIESDVNIMLVKKLRDNVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENXEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIAKLKHGEFTIRDMY 326
>gi|386697609|gb|AFJ22265.1| signal recognition particle protein 54k, partial [Monojoubertia
microphylla]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697601|gb|AFJ22261.1| signal recognition particle protein 54k, partial [Proctophyllodes
sp. n. AD681]
gi|386697603|gb|AFJ22262.1| signal recognition particle protein 54k, partial [Proctophyllodes
stylifer]
gi|386697605|gb|AFJ22263.1| signal recognition particle protein 54k, partial [Proctophyllodes
reguli]
gi|386697607|gb|AFJ22264.1| signal recognition particle protein 54k, partial [Proctophyllodes
hipposideros]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697585|gb|AFJ22253.1| signal recognition particle protein 54k, partial [Proctophyllodes
aff. detruncatus AD715]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697079|gb|AFJ22000.1| signal recognition particle protein 54k, partial [Eohypochthonius
(sen. str.) sp. AD1321]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 269/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNEGFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNTTQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697583|gb|AFJ22252.1| signal recognition particle protein 54k, partial [Proctophyllodes
detruncatus]
Length = 453
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697665|gb|AFJ22293.1| signal recognition particle protein 54k, partial [Rhamphocaulus sp.
B PBK-2011]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697581|gb|AFJ22251.1| signal recognition particle protein 54k, partial [Proctophyllodes
scolopacinus]
gi|386697589|gb|AFJ22255.1| signal recognition particle protein 54k, partial [Joubertophyllodes
modularis]
gi|386697591|gb|AFJ22256.1| signal recognition particle protein 54k, partial [Joubertophyllodes
proximus]
gi|386697593|gb|AFJ22257.1| signal recognition particle protein 54k, partial [Joubertophyllodes
ampulaceus]
gi|386697595|gb|AFJ22258.1| signal recognition particle protein 54k, partial [Proctophyllodes
clavatus]
gi|386697597|gb|AFJ22259.1| signal recognition particle protein 54k, partial [Proctophyllodes
spini]
gi|386697619|gb|AFJ22270.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1194]
gi|386697621|gb|AFJ22271.1| signal recognition particle protein 54k, partial [Proctophyllodinae
sp. AD1212]
gi|386697623|gb|AFJ22272.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1243]
gi|386697625|gb|AFJ22273.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1176]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697553|gb|AFJ22237.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD616]
Length = 453
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697663|gb|AFJ22292.1| signal recognition particle protein 54k, partial [Rhamphocaulus sp.
2B PBK-2011]
Length = 464
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697077|gb|AFJ21999.1| signal recognition particle protein 54k, partial [Brachychthoniidae
gen. sp. 3 AD1301]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKTLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S+A P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISQAVQPNLIIYVMDASIGQACESQARAFKGKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697643|gb|AFJ22282.1| signal recognition particle protein 54k, partial [Pterodectinae
gen. sp. AD648]
Length = 453
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697345|gb|AFJ22133.1| signal recognition particle protein 54k, partial [Apionacaridae
gen. sp. AD1423]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697175|gb|AFJ22048.1| signal recognition particle protein 54k, partial [Canestrinia
pentodontis]
Length = 453
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697555|gb|AFJ22238.1| signal recognition particle protein 54k, partial [Alloptes
obtusolobus]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A +P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAISPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697071|gb|AFJ21996.1| signal recognition particle protein 54k, partial [Stigmalychus sp.
AD1318]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINKDVLDGLLKEICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+IFVMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVEPNLIIFVMDASIGQACESQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNQELIEKLKHGEFTLRDMY 326
>gi|386697505|gb|AFJ22213.1| signal recognition particle protein 54k, partial [Dermatophagoides
pteronyssinus]
gi|386697507|gb|AFJ22214.1| signal recognition particle protein 54k, partial [Dermatophagoides
evansi]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697689|gb|AFJ22305.1| signal recognition particle protein 54k, partial [Alabidocarpus
intercalatus]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697657|gb|AFJ22289.1| signal recognition particle protein 54k, partial [Toxerodectes sp.
A PBK-2011]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPNKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697343|gb|AFJ22132.1| signal recognition particle protein 54k, partial [Fringillosphaera
sp. AD781]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697667|gb|AFJ22294.1| signal recognition particle protein 54k, partial [Prolistrophorus
sp. n. AD725]
Length = 464
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSSENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPDLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|294944803|ref|XP_002784438.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239897472|gb|EER16234.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 528
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/332 (65%), Positives = 275/332 (82%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A++++ AT+IDE VL+ECL EI+ ALLQADV + V E++ NIK+ V
Sbjct: 1 MVLADLGKQISGALRKLGKATVIDEAVLDECLKEISTALLQADVNVRYVAELRKNIKRTV 60
Query: 61 NLDDLAA-GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+L++LAA G NK+R+IQ+A+ N+L +ML P K + P KG+P+VIMFVGLQGSGKTT+CT
Sbjct: 61 DLEELAAPGSNKQRVIQKAVVNQLVEMLSPDKEPYKPTKGQPNVIMFVGLQGSGKTTSCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK KIPFYGSY ESDPV+IA EGV+ F
Sbjct: 121 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVKIPFYGSYVESDPVKIAKEGVDLF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK+ D+IIVDTSGRH+QEAALF+EM QV+ A NP+ ++FVMDS IGQA F+QA+AFK +
Sbjct: 181 KKDKYDIIIVDTSGRHRQEAALFDEMTQVAHAVNPNDIVFVMDSHIGQACFEQAKAFKDT 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
VSVG+V+VTK+DGHAKGGGALSAVAAT SP+IFIGTGEH DEFE FD + FV RLLG+GD
Sbjct: 241 VSVGSVVVTKLDGHAKGGGALSAVAATDSPIIFIGTGEHFDEFEPFDAQSFVQRLLGLGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G M I E +P+++Q +++ ++ G F+LR
Sbjct: 301 IKGLMSTIGEAMPLEKQGDMMARMQSGQFSLR 332
>gi|386697543|gb|AFJ22232.1| signal recognition particle protein 54k, partial [Trouessartia
kratochvili]
gi|386697545|gb|AFJ22233.1| signal recognition particle protein 54k, partial [Trouessartia
reguli]
Length = 464
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697415|gb|AFJ22168.1| signal recognition particle protein 54k, partial [Megninia
ginglymura]
Length = 464
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697539|gb|AFJ22230.1| signal recognition particle protein 54k, partial [Trouessartia
rubecula]
Length = 464
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697499|gb|AFJ22210.1| signal recognition particle protein 54k, partial [Sturnophagoides
bakeri]
Length = 453
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPMKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697497|gb|AFJ22209.1| signal recognition particle protein 54k, partial [Hirstia
chelidonis]
Length = 464
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697325|gb|AFJ22123.1| signal recognition particle protein 54k, partial [Gabucinia sp. B
PBK-2011]
Length = 464
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697653|gb|AFJ22287.1| signal recognition particle protein 54k, partial [Trochilodectes
sp. AD1138]
gi|386697655|gb|AFJ22288.1| signal recognition particle protein 54k, partial [Trochilodectes
sp. AD1236]
Length = 464
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALLESDVNVMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697511|gb|AFJ22216.1| signal recognition particle protein 54k, partial [Onychalges sp. 1
PBK-2011]
Length = 464
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMSAVFQELCKLLDPEVKAWQPIKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPDLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697633|gb|AFJ22277.1| signal recognition particle protein 54k, partial [Alaudicola
bureschi]
Length = 464
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697681|gb|AFJ22301.1| signal recognition particle protein 54k, partial [Listrophorus
validus]
Length = 453
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG S+ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKSWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697081|gb|AFJ22001.1| signal recognition particle protein 54k, partial [Hypochthonius
luteus]
Length = 464
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL++ADV KLV+ ++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALIEADVNIKLVKGLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +VIMFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNVIMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQ+ QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNTTQPNLIIYVMDASIGQSCEAQARAFKGKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697169|gb|AFJ22045.1| signal recognition particle protein 54k, partial [Chaetodactylus
krombeini]
Length = 453
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697101|gb|AFJ22011.1| signal recognition particle protein 54k, partial [Trhypochthonius
cladonicola]
Length = 464
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACESQARAFKNKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697179|gb|AFJ22050.1| signal recognition particle protein 54k, partial [Arrunsithiana nr.
spicantis AD764]
Length = 464
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697155|gb|AFJ22038.1| signal recognition particle protein 54k, partial [Hyadesia
curassaviensis]
Length = 453
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACESQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|242038763|ref|XP_002466776.1| hypothetical protein SORBIDRAFT_01g014030 [Sorghum bicolor]
gi|241920630|gb|EER93774.1| hypothetical protein SORBIDRAFT_01g014030 [Sorghum bicolor]
Length = 476
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/342 (69%), Positives = 285/342 (83%), Gaps = 6/342 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QL GS+ A+ +M NAT++D+KVL++CLNEI+RALLQADV+F+ VR +Q IK V
Sbjct: 1 MVLSQLSGSLKGALSRMCNATLVDQKVLDDCLNEISRALLQADVRFETVRRVQATIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKG-KP-SVIMFVGLQGSGKTTTC 118
NL LA G NKRR+I +A+ EL + LDPGKPSF P KG KP SV+MFVGLQGSGKTTTC
Sbjct: 61 NLQALADGTNKRRVIHRAVVAELRRTLDPGKPSFAPTKGRKPASVVMFVGLQGSGKTTTC 120
Query: 119 TKYAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
KYA YH++ KG PALVCADTFRAGAFDQLKQNATKA IPFYGS+TESDPV++AVEGV+
Sbjct: 121 VKYADYHRRHKGLSPALVCADTFRAGAFDQLKQNATKAGIPFYGSHTESDPVKVAVEGVD 180
Query: 178 TFKKEN-CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
F+ E+ CDLI+VDTSGRH+QEAAL EEMRQV++AT PDLV+FVMD+SIGQAAF QAQAF
Sbjct: 181 RFRDEDACDLIVVDTSGRHRQEAALLEEMRQVADATRPDLVVFVMDASIGQAAFQQAQAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+QS VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ + E FD K FVSRLLG
Sbjct: 241 RQSTPVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDLEAFDAKSFVSRLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMFSL 336
+GD SG MDK+H + D + ++L++L++ NFTLR + L
Sbjct: 301 LGDLSGLMDKMHGIPAYDNRSPYQILEELTKENFTLRALRKL 342
>gi|386697677|gb|AFJ22299.1| signal recognition particle protein 54k, partial [Listrophorus
squamiferus]
Length = 464
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG S+ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKSWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697533|gb|AFJ22227.1| signal recognition particle protein 54k, partial [Trochiloptes sp.
AD1143]
Length = 464
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV KLV++++ N++ I++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKKLRENVRSIIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D+ EL++KL G FT+R M+
Sbjct: 303 -LKLDENEELIEKLKHGEFTIRDMY 326
>gi|386697137|gb|AFJ22029.1| signal recognition particle protein 54k, partial [Hemisarcoptidae
gen. sp. AD666]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+ +V+MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRTNVVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+I+VMD+SIGQA QA+AF V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F KPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D +L+ KL G FTLR M+
Sbjct: 303 -LKLDDNEQLIDKLKHGEFTLRDMY 326
>gi|386697185|gb|AFJ22053.1| signal recognition particle protein 54k, partial [Chortoglyphus
arcuatus]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697659|gb|AFJ22290.1| signal recognition particle protein 54k, partial [Allodectes sp. A
PBK-2011]
gi|386697661|gb|AFJ22291.1| signal recognition particle protein 54k, partial [Allodectes sp.
AD1170]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697349|gb|AFJ22135.1| signal recognition particle protein 54k, partial [Bdellorhynchus
polymorphus]
gi|386697355|gb|AFJ22138.1| signal recognition particle protein 54k, partial [Zygochelifer cf.
ogarinus PBK-2011]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697535|gb|AFJ22228.1| signal recognition particle protein 54k, partial [Steatacarus
bifiditibia]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697679|gb|AFJ22300.1| signal recognition particle protein 54k, partial [Metalistrophorus
pagenstecheri]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697579|gb|AFJ22250.1| signal recognition particle protein 54k, partial [Proctophyllodes
sp. n. AD638]
Length = 453
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NA II+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNAAIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|58386979|ref|XP_315212.2| AGAP004610-PA [Anopheles gambiae str. PEST]
gi|55239546|gb|EAA10561.2| AGAP004610-PA [Anopheles gambiae str. PEST]
Length = 504
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 267/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE + IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVANAVNPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL+ K+ G FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKIKHGQFTIRDMY 333
>gi|386697537|gb|AFJ22229.1| signal recognition particle protein 54k, partial [Calcealges sp. n.
AD770]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEPQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697491|gb|AFJ22206.1| signal recognition particle protein 54k, partial [Gymnoglyphus
longior]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697183|gb|AFJ22052.1| signal recognition particle protein 54k, partial [Chortoglyphus
sciuricola]
Length = 464
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697347|gb|AFJ22134.1| signal recognition particle protein 54k, partial [Bdellorhynchus
sp. AD706]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697085|gb|AFJ22003.1| signal recognition particle protein 54k, partial [Haplochthonius
simplex]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L E+ ALL++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKDVLDGLLKELCTALLESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG S+ P KG+P+++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKSWQPVKGRPNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALICADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFVNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S + P+L+I+VMD+SIGQA QA+AFK V VGAVI+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNSVEPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697419|gb|AFJ22170.1| signal recognition particle protein 54k, partial [Micralges sp. B
PBK-2011]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL E L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLEELLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIAKLKHGEFTIRDMY 326
>gi|386697141|gb|AFJ22031.1| signal recognition particle protein 54k, partial [Nanacarus sp.
AD833]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+P+V+MFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRPNVVMFVGLQGIGKTTTCTKLAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYVESDPVVIAAEGVDKFINENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+I+VMD+SIGQA QA+AF V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D+ +L+ KL G FTLR M+
Sbjct: 303 -LKLDENDQLIDKLKHGEFTLRDMY 326
>gi|386697151|gb|AFJ22036.1| signal recognition particle protein 54k, partial [Vidia sp. AD1098]
Length = 453
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KK
Sbjct: 63 NKRKMIMTAVFQELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKN 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPDLIVYVMDASIGQACEAQAKAFKGKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697675|gb|AFJ22298.1| signal recognition particle protein 54k, partial [Olistrophorus
blarinae]
Length = 453
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQAKAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697165|gb|AFJ22043.1| signal recognition particle protein 54k, partial [Achaetodactylus
leleupi]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|91079686|ref|XP_967889.1| PREDICTED: similar to AGAP004610-PA [Tribolium castaneum]
gi|270003347|gb|EEZ99794.1| hypothetical protein TcasGA2_TC002574 [Tribolium castaneum]
Length = 508
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/334 (63%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSKATIINEEVLNGMLKEICAALLEADVNIRLVKKLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM VS A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGFEIIIVDTSGRHKQEESLFEEMLAVSNAIQPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+I+IGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATNSPIIYIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + ++ ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLEDNEELLEKIKHGQFTLRDMY 333
>gi|386697119|gb|AFJ22020.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD655]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIKSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTT TK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRPNVVMFVGLQGIGKTTTVTKLAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVTKFAKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ EL++KL G FTLR M+
Sbjct: 303 -LKLEDNEELIEKLKHGEFTLRDMY 326
>gi|386697329|gb|AFJ22125.1| signal recognition particle protein 54k, partial [Capitolichus sp.
C PBK-2011]
gi|386697331|gb|AFJ22126.1| signal recognition particle protein 54k, partial [Capitolichus sp.
A PBK-2011]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697571|gb|AFJ22246.1| signal recognition particle protein 54k, partial [Vingrassia
velata]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKAKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697509|gb|AFJ22215.1| signal recognition particle protein 54k, partial [Onychalges sp. 2
PBK-2011]
Length = 464
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697647|gb|AFJ22284.1| signal recognition particle protein 54k, partial [Xynonodectes sp.
AD1213]
Length = 464
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTRENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697403|gb|AFJ22162.1| signal recognition particle protein 54k, partial [Dermoglyphus sp.
n. AD780]
Length = 464
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILMAVFKELIRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALICADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+I+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|357630058|gb|EHJ78449.1| putative signal recognition particle 54 kDa protein [Danaus
plexippus]
Length = 501
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L +I ALL+ADV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNIRLVKNLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ +K WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIASTGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 KEGFEMIIVDTSGRHKQEESLFEEMLAVATAIKPDNIIFVMDATIGQACESQARAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPF+++LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFINKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK+HE + +D ELL+KL G FTLR M+
Sbjct: 301 EGLLDKVHE-LKLDDNDELLEKLKHGQFTLRAMY 333
>gi|386697153|gb|AFJ22037.1| signal recognition particle protein 54k, partial [Crabrovidia sp.
AD610]
Length = 449
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++ AG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMGAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K++DP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLIDPVVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFSNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S AT PDL+++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISAATQPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FTLR M+
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMY 322
>gi|386697089|gb|AFJ22005.1| signal recognition particle protein 54k, partial [Ptyctima gen. sp.
AD1287]
Length = 464
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 269/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFVSEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S AT P+L+I+VMD+SIGQA Q++AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTATQPNLIIYVMDASIGQACEAQSRAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697373|gb|AFJ22147.1| signal recognition particle protein 54k, partial [Sturnotrogus
truncatus]
Length = 464
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQAQAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697327|gb|AFJ22124.1| signal recognition particle protein 54k, partial [Capitolichus sp.
AD1240]
Length = 464
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697645|gb|AFJ22283.1| signal recognition particle protein 54k, partial [Metapterodectes
sp. n. AD556]
Length = 453
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|193580274|ref|XP_001951515.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Acyrthosiphon pisum]
gi|328716940|ref|XP_003246080.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Acyrthosiphon pisum]
Length = 504
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 272/334 (81%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ ++NA++I+E+VLN L +I ALL+A+V LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRGLNNASVINEEVLNSMLKDICAALLEANVNVMLVKKLRENVRNVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG S+ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKSYQPVKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+ KK WK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYYYLKKNWKTCLVCADTFRAGAYDQLKQNATKAQIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++I+VDTSGRHKQEA+LFEEM QVS PD ++FVMD++IGQA QA+AFK V
Sbjct: 181 KEGFEIIVVDTSGRHKQEASLFEEMLQVSNTIKPDNIVFVMDATIGQACEGQARAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++G+V++TK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F KPFVS+LLGMGD
Sbjct: 241 NIGSVVITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + ++ EL++K+ G FT+R M+
Sbjct: 301 EGLIDKVNE-LKLEDNEELIEKIKHGQFTIRDMY 333
>gi|386697541|gb|AFJ22231.1| signal recognition particle protein 54k, partial [Trouessartia sp.
AD952]
gi|386697549|gb|AFJ22235.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD694]
gi|386697551|gb|AFJ22236.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD642]
Length = 464
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697561|gb|AFJ22241.1| signal recognition particle protein 54k, partial [Ingrassiella sp.
AD765]
Length = 464
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFNEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY KKG
Sbjct: 63 NKRRMIMMAVFQELCNILDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYFMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D +L++KL G FT+R M+
Sbjct: 303 -LKLDDNEDLIEKLKHGEFTIRDMY 326
>gi|386697697|gb|AFJ22309.1| signal recognition particle protein 54k, partial [Yunkeracarus
hylomyscus]
Length = 453
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRTVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|170579858|ref|XP_001895013.1| signal recognition particle 54 kDa protein (SRP54) [Brugia malayi]
gi|158598201|gb|EDP36148.1| signal recognition particle 54 kDa protein (SRP54), putative
[Brugia malayi]
Length = 501
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/334 (63%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKQLKDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVTIAANGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ ++IIVDTSGRHKQEA+LFEEM QVS A NP ++FVMD+SIGQA QA+AF ++V
Sbjct: 181 DDGFEIIIVDTSGRHKQEASLFEEMLQVSNAVNPSNIVFVMDASIGQACEAQARAFSETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G + K++E+ D + EL+++L G FTLR M+
Sbjct: 301 EGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMY 333
>gi|386697097|gb|AFJ22009.1| signal recognition particle protein 54k, partial [Afronothrus sp.
AD453]
Length = 453
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L ++ ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDVCTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++I+V
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIVV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697091|gb|AFJ22006.1| signal recognition particle protein 54k, partial [Gehypochthonius
sp. AD1358]
Length = 464
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 270/325 (83%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVDKFTNENFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S + P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISNSVQPNLIIYVMDASIGQACEPQARAFKSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D+ EL++KL G FTLR M+
Sbjct: 303 -LKLDENEELIEKLKHGEFTLRDMY 326
>gi|386697649|gb|AFJ22285.1| signal recognition particle protein 54k, partial [Xynonodectes sp.
B PBK-2011]
Length = 464
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPXKGKTNVIMFVGLQGIGKTTTCTKMAYYYMXKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTRENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697353|gb|AFJ22137.1| signal recognition particle protein 54k, partial [Bdellorhynchus
sp. AD982]
Length = 463
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697351|gb|AFJ22136.1| signal recognition particle protein 54k, partial [Bdellorhynchus
oxyurae]
Length = 460
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/322 (64%), Positives = 262/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKAWQPMKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|386697249|gb|AFJ22085.1| signal recognition particle protein 54k, partial [Heterocoptidae
gen. n. sp. AD552]
Length = 453
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACETQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D ELL+KL G FT+R M+
Sbjct: 303 -LKLDDNEELLEKLKHGEFTIRDMY 326
>gi|386697639|gb|AFJ22280.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD680]
Length = 464
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|289740969|gb|ADD19232.1| signal recognition particle subunit srp54 [Glossina morsitans
morsitans]
Length = 508
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAINPDNIIFVMDATIGQACEAQAKAFKGKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F +KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDMEPFKIKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGQFTIRDMY 333
>gi|386697273|gb|AFJ22097.1| signal recognition particle protein 54k, partial [Freyana
lophodytes]
Length = 464
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNGELIEKLKHGEFTIRDMY 326
>gi|386697651|gb|AFJ22286.1| signal recognition particle protein 54k, partial [Amerodectes aff.
ocelatus AD1139]
Length = 463
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697381|gb|AFJ22151.1| signal recognition particle protein 54k, partial [Ptyssalges sp. n.
1 AD1157]
Length = 463
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697099|gb|AFJ22010.1| signal recognition particle protein 54k, partial [Trhypochthonius
americanus]
Length = 460
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 266/322 (82%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACEAQARAFKNKVDVGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 242 HARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FTLR M+
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMY 322
>gi|386697321|gb|AFJ22121.1| signal recognition particle protein 54k, partial [Aetacarus sp. n.
AD537]
Length = 450
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/324 (63%), Positives = 265/324 (81%), Gaps = 1/324 (0%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG N
Sbjct: 1 TSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLN 60
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
KR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW
Sbjct: 61 KRKMIMTAVFRNLVKLLDPGVPVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGW 120
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVD
Sbjct: 121 KCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVD 180
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
TSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+
Sbjct: 181 TSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKL 240
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 241 DGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE- 299
Query: 311 VPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 300 LKLDDNEELIEKLKHGEFTIRDMY 323
>gi|386697617|gb|AFJ22269.1| signal recognition particle protein 54k, partial [Proctophyllodinae
gen. sp. AD1237]
gi|386697627|gb|AFJ22274.1| signal recognition particle protein 54k, partial [Anisophyllodes
sp. AD1233]
gi|386697629|gb|AFJ22275.1| signal recognition particle protein 54k, partial [aff.
Anisophyllodes sp. AD1179]
Length = 464
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697379|gb|AFJ22150.1| signal recognition particle protein 54k, partial [Scutulanyssus
hirundicola]
Length = 464
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQAQAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|443709552|gb|ELU04185.1| hypothetical protein CAPTEDRAFT_160274 [Capitella teleta]
Length = 505
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 270/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S+AT+I+E+VLN L EI ALL+ADV KLV++++ N+K ++
Sbjct: 1 MVLADLGRKITTALRSLSSATVINEEVLNSLLKEICTALLEADVNIKLVKKLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKRR+IQ A+F EL K++DPG ++ P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRRMIQSAVFKELVKLIDPGVKAWQPTKGKNNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADT+RAGAFDQLKQNA KA+IP+YGS E+DPV IA +GVE FK
Sbjct: 121 LAYYYQKKGWKTCLICADTYRAGAFDQLKQNAIKARIPYYGSLHETDPVVIAQDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE +IIVDTSGRHKQE +LFEEM QV+ +PD +++VMD+SIGQA QA AFK+ V
Sbjct: 181 KEGFQIIIVDTSGRHKQEDSLFEEMLQVANVVSPDNIVYVMDASIGQACEAQAMAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+D HAKGGGALSAVAATKSP+IFIGTGEH+D+FE F V+PFVS+LLGMGD
Sbjct: 241 DVASVIITKLDSHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKVQPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + ++ EL++KL G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLEDNEELMKKLRHGQFTLRDMY 333
>gi|386697333|gb|AFJ22127.1| signal recognition particle protein 54k, partial [Piciformobia sp.
AD1182]
Length = 464
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPVWQPVKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KE D+IIV
Sbjct: 123 YKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKEGFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVN- 301
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 302 ALKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697637|gb|AFJ22279.1| signal recognition particle protein 54k, partial [Amerodectes sp.
1B PBK-2011]
Length = 464
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|312381041|gb|EFR26883.1| hypothetical protein AND_06742 [Anopheles darlingi]
Length = 560
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 267/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE + IIVDTSGRHKQE +LFEEM V+ A +PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVANAVDPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL+ K+ G FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDDNEELIDKIKHGQFTIRDMY 333
>gi|386697641|gb|AFJ22281.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD1195]
Length = 464
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P +GK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVRGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697453|gb|AFJ22187.1| signal recognition particle protein 54k, partial [Picalgoides sp.
n. AD582]
Length = 453
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697109|gb|AFJ22015.1| signal recognition particle protein 54k, partial [Ovanoetus sp.
AD678]
Length = 452
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIRSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GAVI+TK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACESQAKAFKSKVDIGAVIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ EL++KL G FTLR M+
Sbjct: 303 -LKLEDNEELIEKLKHGEFTLRDMY 326
>gi|386697525|gb|AFJ22223.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD636]
Length = 460
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV KLV++++ N++ I++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKKLRENVRSIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLIVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D+ EL++KL G FT+R M+
Sbjct: 301 LDENEELIEKLKHGEFTIRDMY 322
>gi|386697483|gb|AFJ22202.1| signal recognition particle protein 54k, partial [Congocoptes
sphyrapicicola]
Length = 464
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK + IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPIKGKTNXIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697375|gb|AFJ22148.1| signal recognition particle protein 54k, partial [Pteroherpus sp.
AD615]
Length = 453
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICMALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697457|gb|AFJ22189.1| signal recognition particle protein 54k, partial [Picalgoides sp.
AD1159]
Length = 464
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697383|gb|AFJ22152.1| signal recognition particle protein 54k, partial [Ptyssalges sp. A
PBK-2011]
Length = 464
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKINVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697129|gb|AFJ22025.1| signal recognition particle protein 54k, partial [Ovanoetus sp.
AD652]
Length = 452
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIRSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GAVI+TK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACESQAKAFKSKVDIGAVIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ EL++KL G FTLR M+
Sbjct: 303 -LKLEDNEELIEKLKHGEFTLRDMY 326
>gi|386697503|gb|AFJ22212.1| signal recognition particle protein 54k, partial [Dermatophagoides
sp. n. AD1210]
Length = 464
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697385|gb|AFJ22153.1| signal recognition particle protein 54k, partial [Ptyssalges sp.
AD1171]
gi|386697387|gb|AFJ22154.1| signal recognition particle protein 54k, partial [Ptyssalges sp. A
PBK-2011]
Length = 463
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKINVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697397|gb|AFJ22159.1| signal recognition particle protein 54k, partial [Caenolestocoptes
inca]
Length = 464
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 263/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|159471143|ref|XP_001693716.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
gi|158283219|gb|EDP08970.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
Length = 503
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/337 (66%), Positives = 278/337 (82%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS+A+ ++ +++IDEKVL+ L EI ALLQ+DV K V ++ +KK V
Sbjct: 1 MVLQELGSRISKAVATLAASSVIDEKVLDALLKEICTALLQSDVNVKQVANLRNGVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG NK+R+I++A+F+ELC MLD P K +KGK V+MFVGLQGSGKTT
Sbjct: 61 NIQELAAGLNKQRVIEKAVFDELCDMLDSGADPKKLELKKEKGKQQVVMFVGLQGSGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAYY++KKGWKPALVCADT+RAGAFDQLKQNATKA+IPFYGSY E+DP IA +GV
Sbjct: 121 TCTKYAYYYKKKGWKPALVCADTYRAGAFDQLKQNATKAQIPFYGSYKETDPAAIAQQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
F++E DLIIVDTSGRHKQEAALFEEM+QV+ A +PD++IFVMD SIGQAAFDQA+AF
Sbjct: 181 LRFREEGRDLIIVDTSGRHKQEAALFEEMKQVAAAVSPDVIIFVMDGSIGQAAFDQAKAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K++V VGAVI+TK+DGHAKGGGALSAV+ATKSP+IF+GTGEHMD+FE F+ K FV RLLG
Sbjct: 241 KEAVEVGAVIITKLDGHAKGGGALSAVSATKSPIIFLGTGEHMDQFESFETKRFVQRLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
GD SG MDKI +V+P D+QPELL +S+GN +R++
Sbjct: 301 KGDVSGLMDKIQDVIPEDKQPELLDTISKGNVNMRVL 337
>gi|332372642|gb|AEE61463.1| unknown [Dendroctonus ponderosae]
Length = 505
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E VLN L EI ALL+ADV K+V+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALHGLSKATIINEDVLNGMLKEICAALLEADVNVKMVKALRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DP F P KGKP++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPSVKPFQPVKGKPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKK WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 MAYYYQKKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVIIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE+ ++IIVDTSGRHKQE +LFEEM QVS A PD ++FVMD++IGQA +QA+AFK V
Sbjct: 181 KEHFEIIIVDTSGRHKQEDSLFEEMLQVSNAVKPDNIVFVMDATIGQACEEQARAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIG GEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATSSPIIFIGVGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + ++ ELL+K+ G FTLR M+
Sbjct: 301 EGLIDKVNE-LKLEDNEELLEKIKHGQFTLRDMY 333
>gi|386697357|gb|AFJ22139.1| signal recognition particle protein 54k, partial [Mouchetia nr.
indochinensis AD1135]
Length = 464
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697695|gb|AFJ22308.1| signal recognition particle protein 54k, partial [Olabidocarpus sp.
AD416]
Length = 464
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPFKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WRCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+ IGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSAIQPNLVIYVMDAPIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697493|gb|AFJ22207.1| signal recognition particle protein 54k, partial [Gymnoglyphus osu]
Length = 460
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I +A+F ELCK+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMRAVFQELCKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|386697271|gb|AFJ22096.1| signal recognition particle protein 54k, partial [Freyana
largifolia]
Length = 464
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697669|gb|AFJ22295.1| signal recognition particle protein 54k, partial [Afrolistrophorus
sp. n. AD730]
Length = 464
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGIKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSSENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697083|gb|AFJ22002.1| signal recognition particle protein 54k, partial [Eniochthonius sp.
AD1066]
Length = 459
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 266/322 (82%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV+ ++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKTLRENVRSVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG +++P KG+ +V+MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWSPVKGRTNVVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISTTTQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 242 HARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FTLR M+
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMY 322
>gi|386697635|gb|AFJ22278.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD1046]
Length = 464
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLGSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697281|gb|AFJ22101.1| signal recognition particle protein 54k, partial [Hyperaspidacarus
sp. AD1206]
Length = 464
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697207|gb|AFJ22064.1| signal recognition particle protein 54k, partial [Acaridae gen. n.
sp. n. AD469]
Length = 463
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 2 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKQLRENVRSVIDFDEMAAGL 61
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 62 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 121
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IV
Sbjct: 122 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIV 181
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 182 DTSGRHKQESSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 241
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 242 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 301
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 302 -LKLDDNEELIEKLKHGEFTLRDMY 325
>gi|386697557|gb|AFJ22239.1| signal recognition particle protein 54k, partial [Alloptes
crassipes]
Length = 459
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/322 (64%), Positives = 265/322 (82%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFNEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKAWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
+LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 SLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|386697449|gb|AFJ22185.1| signal recognition particle protein 54k, partial [Picalgoides sp.
n. AD787]
Length = 464
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++K+++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRKVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697481|gb|AFJ22201.1| signal recognition particle protein 54k, partial [Schoutedenocoptes
aquilae]
Length = 453
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPMKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V +GA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKLKVDIGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697117|gb|AFJ22019.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD692]
Length = 449
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIKSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTT TK AY++ KKGWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRPNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DG
Sbjct: 182 GRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
++ EL++KL G FTLR M+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMY 322
>gi|386697247|gb|AFJ22084.1| signal recognition particle protein 54k, partial [Cerophagus
nearcticus]
Length = 464
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI ALL++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALLESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMHAVFKELVKLLDPGVKAWQPTKGRTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEEFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697439|gb|AFJ22180.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD766]
Length = 464
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697485|gb|AFJ22203.1| signal recognition particle protein 54k, partial [Echimytricalges
guyanensis]
Length = 453
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697447|gb|AFJ22184.1| signal recognition particle protein 54k, partial [Hyomesalges sp.
AD1028]
Length = 460
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/322 (64%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIKLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW+
Sbjct: 62 RMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWRC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA AFKQ V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQALAFKQKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|386697265|gb|AFJ22093.1| signal recognition particle protein 54k, partial [Dermonoton sp.
AD1250]
Length = 464
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697399|gb|AFJ22160.1| signal recognition particle protein 54k, partial [Tinamoglyphus sp.
AD1186]
Length = 464
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697435|gb|AFJ22178.1| signal recognition particle protein 54k, partial [Analges spiniger]
Length = 464
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697573|gb|AFJ22247.1| signal recognition particle protein 54k, partial [Xolalgidae gen.
sp. AD1199]
Length = 464
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCTLLDPGVKIWEPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G ++K++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLINKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D +L++KL G FT+R M+
Sbjct: 303 -LKLDDNEDLIEKLKHGEFTIRDMY 326
>gi|386697437|gb|AFJ22179.1| signal recognition particle protein 54k, partial [Analges
passerinus]
Length = 448
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697673|gb|AFJ22297.1| signal recognition particle protein 54k, partial [Carnilistrophorus
rhynchocyoni]
Length = 453
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIVMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+I+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697463|gb|AFJ22192.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD773]
Length = 464
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEGQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697445|gb|AFJ22183.1| signal recognition particle protein 54k, partial [Temnalges sp.
AD903]
Length = 464
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FK EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697433|gb|AFJ22177.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD555]
Length = 453
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697377|gb|AFJ22149.1| signal recognition particle protein 54k, partial [Scutulanyssus
subis]
Length = 464
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVQPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697209|gb|AFJ22065.1| signal recognition particle protein 54k, partial [Lardoglyphus sp.
AD983]
Length = 464
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKKLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F+EL K+LD G ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFSELGKLLDSGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+LV++VMD+SIGQA QA+AFK V VGA+I+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAVQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697461|gb|AFJ22191.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD601]
Length = 453
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697431|gb|AFJ22176.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD543]
Length = 464
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697475|gb|AFJ22198.1| signal recognition particle protein 54k, partial [aff. Paralgopsis
sp. AD733]
gi|386697477|gb|AFJ22199.1| signal recognition particle protein 54k, partial [aff. Paralgopsis
sp. D AD1162]
Length = 464
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697167|gb|AFJ22044.1| signal recognition particle protein 54k, partial [Sennertia
zhelochovtsevi]
Length = 453
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATI ++ VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIXNQDVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|194750277|ref|XP_001957554.1| GF23972 [Drosophila ananassae]
gi|190624836|gb|EDV40360.1| GF23972 [Drosophila ananassae]
Length = 508
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNAMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAVNPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMY 333
>gi|391347716|ref|XP_003748101.1| PREDICTED: uncharacterized protein LOC100903576 [Metaseiulus
occidentalis]
Length = 1627
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 274/334 (82%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S AT+I+++VL+ L EI ALL++D+ +LV++++ N++ +
Sbjct: 1 MVLADLGRRITGALRNLSTATVINQEVLDSMLKEICAALLESDINVRLVKQLRDNVRAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++++A G N+R+++Q A+F EL K++DPG ++TP+KG+ + IMFVGLQGSGKTTTCTK
Sbjct: 61 DIEEMAVGLNRRKVVQSAVFKELVKLVDPGVKAWTPQKGRSNTIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV FK
Sbjct: 121 LAYHYMKKGWKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++IIVDTSGRHKQE +LFEEM +VS A +PD VIFVMD+SIGQA QA+AFK+ V
Sbjct: 181 AEHFEIIIVDTSGRHKQEDSLFEEMLEVSNAVSPDNVIFVMDASIGQACELQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+FE F VKPF+ +LLG+GD
Sbjct: 241 DVASVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEPFRVKPFIQKLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E+ +D+ EL++KL G FTLR M+
Sbjct: 301 EGLIDKVNELK-LDENHELIEKLKHGEFTLRDMY 333
>gi|412992549|emb|CCO18529.1| predicted protein [Bathycoccus prasinos]
Length = 511
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/340 (63%), Positives = 272/340 (80%), Gaps = 6/340 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ A+ +S T+IDE+++ + L EIT+ALL ADV + V +M+ NI K V
Sbjct: 1 MVLNDLGSKLANALSSLSKHTVIDEEIMEDVLKEITKALLSADVNVQYVVQMKKNIVKAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG------KPSFTPKKGKPSVIMFVGLQGSGK 114
++DDLA G N ++++++A+FNELC MLD G K F PKKGKP+V+MFVGLQG GK
Sbjct: 61 DIDDLAGGINAKKMLEKAVFNELCNMLDGGDAKSEVKAKFVPKKGKPNVVMFVGLQGCGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTKYA Y+ +KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDP +IA E
Sbjct: 121 TTTCTKYASYYARKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPAKIAAE 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV+ FK+E DLIIVDTSGRHKQ ALFEEMR V EA NP + I+ MDSS+GQ A DQA+
Sbjct: 181 GVQRFKEEKFDLIIVDTSGRHKQSEALFEEMRAVDEAVNPTMTIYTMDSSMGQMAKDQAE 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK +V VGAVI+TK DGH+KGGGA++AVAATKSP+IF+GTGEH+++ E FD +PFVSRL
Sbjct: 241 AFKSAVDVGAVIMTKTDGHSKGGGAIAAVAATKSPIIFVGTGEHLEDIEAFDTQPFVSRL 300
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
LG+GDW G M+K+ +VVP DQ +L+ ++ G FT+R+++
Sbjct: 301 LGLGDWQGLMEKLSDVVPEDQGQKLVDGITSGQFTMRLLY 340
>gi|386697389|gb|AFJ22155.1| signal recognition particle protein 54k, partial [Ptyssalgidae gen.
n. sp. AD1153]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELIKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFIKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697501|gb|AFJ22211.1| signal recognition particle protein 54k, partial [Dermatophagoides
farinae]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKKLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAPEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQALAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVSE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697367|gb|AFJ22144.1| signal recognition particle protein 54k, partial [Stenopteronyssus
proctorae]
Length = 453
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697365|gb|AFJ22143.1| signal recognition particle protein 54k, partial [Pteronyssus aff.
centurus AD634]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697369|gb|AFJ22145.1| signal recognition particle protein 54k, partial [Neopteronyssus
pici]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697285|gb|AFJ22103.1| signal recognition particle protein 54k, partial [Herodialges sp.
AD945]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KG +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAYQPIKGMTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697575|gb|AFJ22248.1| signal recognition particle protein 54k, partial [Xolalgidae gen.
sp. AD1204]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCTLLDPGVKIWEPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G ++K++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLINKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D +L++KL G FT+R M+
Sbjct: 303 -LKLDDNEDLIEKLKHGEFTIRDMY 326
>gi|125980516|ref|XP_001354282.1| GA18336 [Drosophila pseudoobscura pseudoobscura]
gi|195167799|ref|XP_002024720.1| GL22620 [Drosophila persimilis]
gi|54642588|gb|EAL31335.1| GA18336 [Drosophila pseudoobscura pseudoobscura]
gi|194108125|gb|EDW30168.1| GL22620 [Drosophila persimilis]
Length = 508
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAVNPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMY 333
>gi|386697529|gb|AFJ22225.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD882]
Length = 460
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/322 (65%), Positives = 262/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D+ EL++KL G FT+R M+
Sbjct: 301 LDENDELIEKLKHGEFTIRDMY 322
>gi|386697467|gb|AFJ22194.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD871]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697339|gb|AFJ22130.1| signal recognition particle protein 54k, partial [Cystoidosoma sp.
AD1160]
gi|386697341|gb|AFJ22131.1| signal recognition particle protein 54k, partial [Ascouracarus sp.
AD1241]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKTWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVTE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697245|gb|AFJ22083.1| signal recognition particle protein 54k, partial [Sennertionyx
manicati]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICSALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMHAVFKELVKLLDPGVKTWQPTKGRTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEEFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697465|gb|AFJ22193.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD637]
Length = 464
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNILLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|326435414|gb|EGD80984.1| signal recognition particle protein [Salpingoeca sp. ATCC 50818]
Length = 523
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I A+ M++AT+IDE+V +E + +I RAL+++DVQ LV +++ NIK V
Sbjct: 1 MVLGDLGRKIKGALWNMTSATVIDEEVFDELVKDICRALIESDVQVGLVSKLRNNIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
DD AG N+RR IQ+A+F ELCK++DPG + PKK +P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 QFDDSGAGVNRRRQIQRAVFTELCKLVDPGVTPWKPKKNQPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q++GWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQRRGWKACLVCADTFRAGAFDQLKQNATKARIPFYGSYTEIDPVVIAADGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ ++IIVDTSGRHKQE +LFEEM QVS A +PD +IFVMD++IGQA QAQAFK V
Sbjct: 181 QQGFEIIIVDTSGRHKQEDSLFEEMLQVSNAVDPDNIIFVMDATIGQACQGQAQAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VGAVIVTK+DGHAKGGGALSAVAATKSP+++IGTGEH+D+ E F K FVS+LLGMGD
Sbjct: 241 DVGAVIVTKLDGHAKGGGALSAVAATKSPIVYIGTGEHIDDLEPFQTKSFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G M+++ E + +D+Q ++++++ G FT+R M+
Sbjct: 301 QGLMERVSE-IGLDKQKDMMERIKAGVFTMRDMY 333
>gi|386697087|gb|AFJ22004.1| signal recognition particle protein 54k, partial [Cosmochthonius
lanatus]
Length = 464
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 268/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S + P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTSVQPNLIIYVMDASIGQACEAQARAFKNKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTLRDMY 326
>gi|386697295|gb|AFJ22108.1| signal recognition particle protein 54k, partial [Grallobia
fulicae]
Length = 464
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D ELL+KL G FT+R M+
Sbjct: 303 -LKLDDNEELLEKLKHGEFTIRDMY 326
>gi|386697297|gb|AFJ22109.1| signal recognition particle protein 54k, partial [Grallolichus sp.
AD907]
Length = 464
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNGELIEKLKHGEFTIRDMY 326
>gi|386697683|gb|AFJ22302.1| signal recognition particle protein 54k, partial [Trichoecius sp.
n. AD367]
Length = 464
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 262/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ ++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFGEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE LFEEM + A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENTLFEEMLAIQAAIVPDLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697131|gb|AFJ22026.1| signal recognition particle protein 54k, partial [Anoetus sp.
AD664]
Length = 449
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDSMLKEICAALLEADVNILLVKKLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GAVIVTK+DG
Sbjct: 182 GRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACESQAKAFKNKVDIGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
++ EL++KL G FTLR M+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMY 322
>gi|386697103|gb|AFJ22012.1| signal recognition particle protein 54k, partial [Anachipteria sp.
AD1103]
Length = 460
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/322 (64%), Positives = 266/322 (82%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV+E++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKELRENVRSVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWTPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNEGFEVIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM +S P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAISTTVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 242 HARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FTLR M+
Sbjct: 301 LDDNEELIEKLKHGEFTLRDMY 322
>gi|386697305|gb|AFJ22113.1| signal recognition particle protein 54k, partial [Aniacarus
mexicanus]
Length = 464
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 267/325 (82%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI+ AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 INTALRSLGNATIINQEVLDNLLKEISMALMESDVNIKLVKQLRDNVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A++ EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVYKELMRLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697671|gb|AFJ22296.1| signal recognition particle protein 54k, partial [Afrolistrophorus
congoicola]
Length = 464
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIVMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WXCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697469|gb|AFJ22195.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD867]
Length = 464
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNILLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697283|gb|AFJ22102.1| signal recognition particle protein 54k, partial [Falculiferidae
sp. AD1207]
Length = 464
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697489|gb|AFJ22205.1| signal recognition particle protein 54k, partial [Psoroptes ovis]
Length = 449
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/322 (64%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +D+++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDRVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++K+ G FT+R M+
Sbjct: 301 LDDNEELIEKIKHGEFTIRDMY 322
>gi|386697455|gb|AFJ22188.1| signal recognition particle protein 54k, partial [Picalgoides aff.
pteroglossorum AD1152]
Length = 464
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697451|gb|AFJ22186.1| signal recognition particle protein 54k, partial [Picalgoides
picimajoris]
Length = 464
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVTE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697143|gb|AFJ22032.1| signal recognition particle protein 54k, partial [Nanacarus sp.
AD545]
Length = 447
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+ +V+MFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRSNVVMFVGLQGIGKTTTCTKLAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYVESDPVVIAAEGVDKFTNENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+I+VMD+SIGQA QA+AF V VGAVIVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F KPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D+ +L+ KL G FTLR M+
Sbjct: 303 -LKLDENDQLIDKLKHGEFTLRDMY 326
>gi|386697359|gb|AFJ22140.1| signal recognition particle protein 54k, partial [Ramphastobius sp.
A PBK-2011]
Length = 464
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 263/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK+ E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVTE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGQFTIRDMY 326
>gi|209879780|ref|XP_002141330.1| signal recognition particle protein SRP54 [Cryptosporidium muris
RN66]
gi|209556936|gb|EEA06981.1| signal recognition particle protein SRP54, putative
[Cryptosporidium muris RN66]
Length = 497
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 269/334 (80%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG ++ AI+++ +ATI+DE ++ CL EI ALLQADV KLV +++ NIKK +
Sbjct: 1 MVLAELGTQLTAAIKKLQSATIVDEATIDNCLREIATALLQADVNVKLVAQLRNNIKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +KRR+IQ ++ EL K+L P + + P K K ++++FVGLQGSGKTTTCTK
Sbjct: 61 SSQGNLQVASKRRLIQASVVEELVKILTPQRKPYVPTKDKCNIVVFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+Q+KGWK ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV+IA +GV+ F+
Sbjct: 121 YAHYYQRKGWKTALVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKIASDGVKEFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+N DLIIVDTSGRHKQE++LF EM+Q+ +T PD V+FVMDS IGQA +DQA AF +
Sbjct: 181 DDNYDLIIVDTSGRHKQESSLFVEMQQIVLSTKPDNVVFVMDSHIGQACYDQALAFCSVI 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT +P+IFIGTGEH D+FE F+ + FVSRLLG+GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATSAPIIFIGTGEHFDDFEPFETRGFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SG KI+EVVP+D+QPE++ ++ +G FTLR M+
Sbjct: 301 SGLFAKINEVVPIDKQPEMVNRIVQGIFTLRDMY 334
>gi|242009196|ref|XP_002425377.1| Signal recognition particle 54 kDa protein, putative [Pediculus
humanus corporis]
gi|212509171|gb|EEB12639.1| Signal recognition particle 54 kDa protein, putative [Pediculus
humanus corporis]
Length = 501
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 265/334 (79%), Gaps = 6/334 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT VLN L +I ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALHSLSKAT-----VLNSMLKDICTALLEADVNIRLVKKLRENVRAVI 55
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG S P KGKP++IMFVGLQGSGKTTTCTK
Sbjct: 56 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKSHQPVKGKPNIIMFVGLQGSGKTTTCTK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 116 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QVS A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 176 KEGFEIIIVDTSGRHKQEESLFEEMLQVSNAIKPDNIIFVMDATIGQACESQARAFKEKV 235
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F KPF+S+LLGMGD
Sbjct: 236 NVGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDFESFKTKPFISKLLGMGDI 295
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL++K+ G FTLR M+
Sbjct: 296 EGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMY 328
>gi|386697275|gb|AFJ22098.1| signal recognition particle protein 54k, partial [Freyana sp.
AD1003]
Length = 464
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNGELIEKLKHGEFTIRDMY 326
>gi|386697243|gb|AFJ22082.1| signal recognition particle protein 54k, partial [Histiogaster sp.
AD356]
Length = 450
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/324 (63%), Positives = 263/324 (81%), Gaps = 1/324 (0%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG N
Sbjct: 1 TTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLN 60
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
KRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGW
Sbjct: 61 KRRMIMMAVFQELVKLLDPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGW 120
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVD
Sbjct: 121 KCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVD 180
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
TSGRHKQE++LFEEM +S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+
Sbjct: 181 TSGRHKQESSLFEEMLAISAAVQPQQIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKL 240
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 241 DGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE- 299
Query: 311 VPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FTLR M+
Sbjct: 300 LKLDDNEELIEKLKHGEFTLRDMY 323
>gi|386697139|gb|AFJ22030.1| signal recognition particle protein 54k, partial [Congovidia sp.
AD699]
Length = 464
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ I++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRAIIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG +V+MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGHTNVVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVDKFINENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM +S A PDL+++VMD+SIGQA QA+AF V VGAVI+TK
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAVQPDLIVYVMDASIGQACEAQARAFSSKVDVGAVIITK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IF+GTGEH++EFE F KPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFVGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D +L+ KL G FTLR M+
Sbjct: 303 -LKLDDNEQLIDKLKHGEFTLRDMY 326
>gi|195491937|ref|XP_002093779.1| GE21487 [Drosophila yakuba]
gi|194179880|gb|EDW93491.1| GE21487 [Drosophila yakuba]
Length = 508
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMY 333
>gi|324502545|gb|ADY41120.1| Signal recognition particle 54 kDa protein [Ascaris suum]
Length = 503
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 266/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN LNE+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRRIRNAIGKLGQATIINEDELNAMLNEVCGALLEADVNIRLVKQLRDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG + P KGKP+V MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPYQPTKGKPNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IP+YGSY E DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPYYGSYIEMDPVVIATNGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++IIVDTSGRHKQEA+LFEEM QVS A +P+ V+FVMD+SIGQA QA+AF +V
Sbjct: 181 GEGFEIIIVDTSGRHKQEASLFEEMLQVSNAISPNNVVFVMDASIGQACEAQARAFSTTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFEVKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G + K++E + ++ EL+++L G FTLR M+
Sbjct: 301 EGLVKKVNE-MGLEDNEELIKRLKHGMFTLRDMY 333
>gi|386697361|gb|AFJ22141.1| signal recognition particle protein 54k, partial [Parapteronyssus
picoides]
Length = 460
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/322 (65%), Positives = 262/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
RII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG+K
Sbjct: 62 RIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGFKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL+ KL G FT+R M+
Sbjct: 301 LDDNEELIGKLKHGEFTIRDMY 322
>gi|386697425|gb|AFJ22173.1| signal recognition particle protein 54k, partial [Analges sp.
AD1022]
Length = 460
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/322 (64%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|386697127|gb|AFJ22024.1| signal recognition particle protein 54k, partial [Sellea sp. AD658]
Length = 449
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/322 (63%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDNMLKEICAALLESDVNILLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GA+I+TK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIITKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSPVIFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPVIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
++ EL++KL G FTLR M+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMY 322
>gi|386697363|gb|AFJ22142.1| signal recognition particle protein 54k, partial [Pteronyssus
sphyrapicinus]
Length = 460
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/322 (65%), Positives = 262/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
RII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG+K
Sbjct: 62 RIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGFKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL+ KL G FT+R M+
Sbjct: 301 LDDNEELIGKLKHGEFTIRDMY 322
>gi|194866950|ref|XP_001971975.1| GG15264 [Drosophila erecta]
gi|190653758|gb|EDV51001.1| GG15264 [Drosophila erecta]
Length = 508
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMY 333
>gi|386697261|gb|AFJ22091.1| signal recognition particle protein 54k, partial [Kramerella oti]
Length = 464
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ EL++KL G FT+R M+
Sbjct: 303 -LKLEDNEELIEKLKHGEFTIRDMY 326
>gi|148298873|ref|NP_001091776.1| putative signal recognition particle 54 kDa protein [Bombyx mori]
gi|111608119|gb|ABH10803.1| putative signal recognition particle 54 kDa protein [Bombyx mori]
Length = 501
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 264/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L +I ALL+ADV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNIRLVKNLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIM+VGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMYVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ +K WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIATTGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ ++IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 KQGLEMIIVDTSGRHKQEESLFEEMLAVATAIKPDNIIFVMDATIGQACEAQARAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPF+ +LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFIKKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+KL G FTLR M+
Sbjct: 301 EGLLDKVNE-LKLDDNDELLEKLKHGQFTLRAMY 333
>gi|386697471|gb|AFJ22196.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD938]
gi|386697473|gb|AFJ22197.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD1042]
Length = 460
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|386697293|gb|AFJ22107.1| signal recognition particle protein 54k, partial [Grallobia sp.
AD959]
Length = 453
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ D + ELL+KL G FT+R M+
Sbjct: 303 LKLADNE-ELLEKLKHGEFTIRDMY 326
>gi|386697513|gb|AFJ22217.1| signal recognition particle protein 54k, partial [Microlichus sp.
AD759]
gi|386697515|gb|AFJ22218.1| signal recognition particle protein 54k, partial [Epidermoptidae
sp. B]
Length = 464
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697427|gb|AFJ22174.1| signal recognition particle protein 54k, partial [Anhemialges sp.
AD813]
Length = 460
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/322 (64%), Positives = 262/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG + P+K K +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKVWQPQKNKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|157115970|ref|XP_001652739.1| signal recognition particle 54 kda protein [Aedes aegypti]
gi|108876679|gb|EAT40904.1| AAEL007400-PA [Aedes aegypti]
Length = 357
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 266/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N+K ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE + IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVATAVKPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL+ K+ G FT+R M+
Sbjct: 301 EGLIDKVNE-LNLDDNEELIDKIKHGQFTIRDMY 333
>gi|386697371|gb|AFJ22146.1| signal recognition particle protein 54k, partial [Pteronyssoides
piscinotus]
Length = 464
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ I++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKKLRENVRSIIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKCWQPTKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
++ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 YRSALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A +P+L+++VMD+SIGQA QAQAF+ V +GA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIKSAISPNLIVYVMDASIGQACEAQAQAFQNKVDIGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL+ KL G FT+R M+
Sbjct: 303 -LKLDDNEELIGKLKHGEFTIRDMY 326
>gi|386697319|gb|AFJ22120.1| signal recognition particle protein 54k, partial [Phyllochaeta
tenuiseta]
Length = 464
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPIKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGVE FK+E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVEKFKEEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +D+++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDRVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ EL++KL G FT+R M+
Sbjct: 303 -LKLEDNEELIEKLKHGEFTIRDMY 326
>gi|30580515|sp|Q8MZJ6.1|SRP54_GEOCY RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|20750404|gb|AAM23234.1| signal recognition particle 54 kD protein [Geodia cydonium]
Length = 499
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 266/334 (79%), Gaps = 2/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ T+I+E+VL L EI ALL+ADV KLV +++ N++ +
Sbjct: 1 MVLADLGRKITTALLP-RQRTVINEEVLQAMLKEICTALLEADVNVKLVGKLRQNVRAAI 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+ AG +KRRIIQ ++FNELCK+LDPG P + P KG +VIMFVGLQGSGKTTTCTK
Sbjct: 60 DFEDMGAGLSKRRIIQTSVFNELCKLLDPGVPVWHPTKGHSNVIMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK LVCADTFRAGAFDQLKQNATKA++PFYGSYTE DPV IA EGVE FK
Sbjct: 120 LAYHYQKKGWKTCLVCADTFRAGAFDQLKQNATKARVPFYGSYTEMDPVVIAQEGVEKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+++ ++IIVDTSGRHKQE +LFEEM QVS+A +PD +IFVMD +IGQA QA+AFK+ V
Sbjct: 180 EDSFEVIIVDTSGRHKQEESLFEEMLQVSQAIDPDNIIFVMDGTIGQACESQARAFKEKV 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DE E F KPFVS+LLGMGD
Sbjct: 240 DVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDEMEPFKTKPFVSKLLGMGDL 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G M+K+ + + +D+ EL+ KL G FTLR M+
Sbjct: 300 EGLMEKVSD-LKLDENEELMDKLKHGQFTLRDMY 332
>gi|386697303|gb|AFJ22112.1| signal recognition particle protein 54k, partial [Chelomatolichus
sp. AD1166]
Length = 464
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKANIPFYGSYTESDPVVIASEGVEKFTDENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAVQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|195441672|ref|XP_002068627.1| GK20323 [Drosophila willistoni]
gi|194164712|gb|EDW79613.1| GK20323 [Drosophila willistoni]
Length = 508
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNAMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMY 333
>gi|386697269|gb|AFJ22095.1| signal recognition particle protein 54k, partial [Freyana sp. n.
AD630]
Length = 464
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNGELIEKLKHGEFTIRDMY 326
>gi|386697523|gb|AFJ22222.1| signal recognition particle protein 54k, partial [Neodermation sp.
AD858]
Length = 459
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/322 (64%), Positives = 262/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++K+++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIESDVNILLVKQLRENVRKVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A PDLV++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPDLVVYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G MDK+ ++
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLMDKVSQLKL 301
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
D + EL++KL G FT+R M+
Sbjct: 302 GDNE-ELIEKLKHGEFTIRDMY 322
>gi|393907084|gb|EFO21698.2| signal recognition particle protein [Loa loa]
Length = 501
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV+ ++ N+K+ +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKVLKDNVKRTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTC+K
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY E DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYIEMDPVTIAASGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ ++I+VDTSGRHKQEA+LFEEM QVS A NP+ ++FVMD+SIGQA QA+AF ++V
Sbjct: 181 EDGFEIIVVDTSGRHKQEASLFEEMLQVSNAVNPNNIVFVMDASIGQACEAQARAFSETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G + K++E+ D + EL+++L G FTLR M+
Sbjct: 301 EGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMY 333
>gi|386697429|gb|AFJ22175.1| signal recognition particle protein 54k, partial [Hemialges sp. n.
AD673]
Length = 464
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDLEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ D Q +L++KL G FT+R M+
Sbjct: 303 LKLEDNQ-DLIEKLKHGEFTIRDMY 326
>gi|195337623|ref|XP_002035428.1| GM14699 [Drosophila sechellia]
gi|194128521|gb|EDW50564.1| GM14699 [Drosophila sechellia]
Length = 508
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLLDKVNE-LKLDGNDELLEKIKHGHFTIRDMY 333
>gi|386697279|gb|AFJ22100.1| signal recognition particle protein 54k, partial [Falculifer sp.
AD994]
Length = 460
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/322 (63%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 KMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQARAFKDKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+D EL++KL G FT+R M+
Sbjct: 301 LDDNEELIEKLKHGEFTIRDMY 322
>gi|195587932|ref|XP_002083715.1| GD13881 [Drosophila simulans]
gi|194195724|gb|EDX09300.1| GD13881 [Drosophila simulans]
Length = 508
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLLDKVNE-LKLDGNDELLEKIKHGHFTIRDMY 333
>gi|386697115|gb|AFJ22018.1| signal recognition particle protein 54k, partial [Myanoetus sp.
AD832]
Length = 449
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/322 (63%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI + NAT+I+++VL+ L EI AL++ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIWSLGNATVINQEVLDNMLKEICSALIEADVNILLVKKLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P +G+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFTELCKLLDPGVKQWAPVRGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F+KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFQKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DG
Sbjct: 182 GRHKQENSLFEEMLAIQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
++ EL++KL G FTLR M+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMY 322
>gi|17647949|ref|NP_523931.1| signal recognition particle protein 54k [Drosophila melanogaster]
gi|5679038|gb|AAD46831.1|AF160891_1 BcDNA.GM09489 [Drosophila melanogaster]
gi|7295492|gb|AAF50806.1| signal recognition particle protein 54k [Drosophila melanogaster]
gi|220952956|gb|ACL89021.1| Srp54k-PA [synthetic construct]
Length = 508
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNDELLEKIKHGHFTIRDMY 333
>gi|386697113|gb|AFJ22017.1| signal recognition particle protein 54k, partial [Pelzneria sp.
AD974]
Length = 449
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/322 (63%), Positives = 262/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI AL++ADV LV++++ N++ I++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDNMLKEICAALIEADVNIMLVKKLRENVRNIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWAPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE +LFEEM + AT+PDL ++VMD+SIGQA QA+AFK V +GA+IVTK+DG
Sbjct: 182 GRHKQENSLFEEMLAIQAATSPDLCVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
++ EL++KL G FTLR M+
Sbjct: 301 LEDNEELIEKLKHGEFTLRDMY 322
>gi|195127379|ref|XP_002008146.1| GI13333 [Drosophila mojavensis]
gi|193919755|gb|EDW18622.1| GI13333 [Drosophila mojavensis]
Length = 508
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM V+ A NPD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANAVNPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMY 333
>gi|20151307|gb|AAM11013.1| AT23778p [Drosophila melanogaster]
Length = 569
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNDELLEKIKHGHFTIRDMY 333
>gi|386697311|gb|AFJ22116.1| signal recognition particle protein 54k, partial [Ptiloxenus sp.
AD1257]
Length = 464
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGV+ F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVDKFINEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697259|gb|AFJ22090.1| signal recognition particle protein 54k, partial [Picidectes
chapini]
Length = 453
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELGRLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFSNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ EL++KL G FT+R M+
Sbjct: 303 -LKLEDNEELIEKLKHGEFTIRDMY 326
>gi|386697395|gb|AFJ22158.1| signal recognition particle protein 54k, partial [Strelkoviacarus
sp. AD771]
Length = 464
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 266/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
++ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 LTTALRSLGNATIINQEVLDNLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LD G+ + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILTAVFKELHKLLDSGEKLWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP++FIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPILFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ ELL+KL G+FT+R M+
Sbjct: 303 -LKLEDTEELLEKLKHGDFTIRDMY 326
>gi|312079906|ref|XP_003142374.1| signal recognition particle protein [Loa loa]
Length = 530
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV+ ++ N+K+ +
Sbjct: 30 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKVLKDNVKRTL 89
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTC+K
Sbjct: 90 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCSK 149
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY E DPV IA GV+ FK
Sbjct: 150 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYIEMDPVTIAASGVDKFK 209
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ ++I+VDTSGRHKQEA+LFEEM QVS A NP+ ++FVMD+SIGQA QA+AF ++V
Sbjct: 210 EDGFEIIVVDTSGRHKQEASLFEEMLQVSNAVNPNNIVFVMDASIGQACEAQARAFSETV 269
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 270 DVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGDI 329
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G + K++E+ D + EL+++L G FTLR M+
Sbjct: 330 EGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMY 362
>gi|242033617|ref|XP_002464203.1| hypothetical protein SORBIDRAFT_01g014055 [Sorghum bicolor]
gi|241918057|gb|EER91201.1| hypothetical protein SORBIDRAFT_01g014055 [Sorghum bicolor]
Length = 471
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/337 (70%), Positives = 281/337 (83%), Gaps = 6/337 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L GS+ A+ +M NAT++D+KVL++CLNEI+RALLQADV+F+ VR +Q +IK VNL L
Sbjct: 1 LSGSLKGALSRMCNATLVDQKVLDDCLNEISRALLQADVRFETVRRVQASIKSTVNLQAL 60
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKG-KP-SVIMFVGLQGSGKTTTCTKYAY 123
A G NKRR+I +A+ EL + LDPGKPSF P KG KP SV+MFVGLQGSGKTTTC KYA
Sbjct: 61 ADGTNKRRVIHRAVVAELRRTLDPGKPSFAPTKGRKPASVVMFVGLQGSGKTTTCVKYAD 120
Query: 124 YHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
YH++ KG PALVCADTFRAGAFDQLKQNATKA IPFYGS+TESDPV++AVEGV+ F+ E
Sbjct: 121 YHRRHKGLSPALVCADTFRAGAFDQLKQNATKAGIPFYGSHTESDPVKVAVEGVDRFRNE 180
Query: 183 N-CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ CDLI+VDTSGRH+QEAAL EEMRQV++AT PDLV+FVMD+SIGQAAF QAQAF+QS
Sbjct: 181 DACDLIVVDTSGRHRQEAALLEEMRQVADATRPDLVVFVMDASIGQAAFQQAQAFRQSAP 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ + E FD K FVSRLLG+GD S
Sbjct: 241 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDLEAFDAKSFVSRLLGLGDLS 300
Query: 302 GFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMFSL 336
G M+KIH V D + ++L++L++ NFTLR + L
Sbjct: 301 GLMEKIHGVPADDNRSPYQILEELTKENFTLRALRKL 337
>gi|195376317|ref|XP_002046943.1| GJ13160 [Drosophila virilis]
gi|194154101|gb|EDW69285.1| GJ13160 [Drosophila virilis]
Length = 508
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D ELL+K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMY 333
>gi|386697687|gb|AFJ22304.1| signal recognition particle protein 54k, partial [Myocoptes
japonensis]
Length = 464
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 260/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ ++ AG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFGEMPAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENTLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697517|gb|AFJ22219.1| signal recognition particle protein 54k, partial [Myialges sp.
AD1127]
Length = 464
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 263/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697301|gb|AFJ22111.1| signal recognition particle protein 54k, partial [Scolaralichus sp.
AD1165]
Length = 464
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 263/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA IP+YGSY ESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKAGIPYYGSYIESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAVQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697289|gb|AFJ22105.1| signal recognition particle protein 54k, partial [Pterolichus
obtusus]
Length = 453
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK+ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|195014137|ref|XP_001983965.1| GH16182 [Drosophila grimshawi]
gi|193897447|gb|EDV96313.1| GH16182 [Drosophila grimshawi]
Length = 508
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQE +LFEEM VS A +PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 241 DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D EL++K+ G+FT+R M+
Sbjct: 301 EGLIDKVNE-LKLDGSEELMEKIKHGHFTIRDMY 333
>gi|386697317|gb|AFJ22119.1| signal recognition particle protein 54k, partial [Leptosyringobia
longitarsa]
Length = 464
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPIKGKANIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGVE F +E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVEKFIEEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|170046875|ref|XP_001850971.1| signal recognition particle 54 kda protein [Culex quinquefasciatus]
gi|167869479|gb|EDS32862.1| signal recognition particle 54 kda protein [Culex quinquefasciatus]
Length = 515
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/334 (61%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+ +VL+ L EI ALL+ADV +LV++++ N+K ++
Sbjct: 12 MVLADLGRKITNALHSLSKATIINAEVLDAMLKEICTALLEADVNIRLVKKLRENVKSVI 71
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 72 DFDEMAGGLNKRRMIQTAVFKELVKLVDPGVKPYQPVKGRPNIIMFVGLQGSGKTTTCTK 131
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 132 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 191
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE + IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 192 KEGFEFIIVDTSGRHKQEESLFEEMLAVATAIKPDNIIFVMDATIGQACEAQAKAFKEKV 251
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 252 DIGSVIITKLDGHAKGGGALSAVAATSSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGDI 311
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G ++K+++ + +D EL+ K+ G FT+R M+
Sbjct: 312 EGLIEKVND-LNLDDNEELIDKIKHGQFTIRDMY 344
>gi|386697105|gb|AFJ22013.1| signal recognition particle protein 54k, partial [Kanoetus sp. n.
AD763]
Length = 452
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 265/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NA II+++VL+ L E+ AL++ADV LV++++ N++K+++ +++AAG
Sbjct: 3 ITSAIRSLGNAPIINQQVLDGMLKEVCAALIEADVNILLVKKLRENVRKVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F ELCK+LDPG +TP KGK +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMTVFQELCKLLDPGVAQWTPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F ++ D++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAAEGVKLFTEKAFDIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRH+QE++LFEEM + T+PDLV++VMD+SIGQA QA+AFK V++GA+IVTK
Sbjct: 183 DTSGRHRQESSLFEEMLAIQATTSPDLVVYVMDASIGQACEAQAKAFKNKVAIGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHA+GGGALSAVAATKSP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E
Sbjct: 243 LDGHARGGGALSAVAATKSPIIFIGTGEHIDQFEPFKVKPFVSKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ EL+ KL G FTLR M+
Sbjct: 303 -LKLEDNEELINKLKHGEFTLRDMY 326
>gi|386697287|gb|AFJ22104.1| signal recognition particle protein 54k, partial [Mesosathes sp.
AD1187]
Length = 464
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 263/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKANVVMFVGLQGIGKTTTVTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697393|gb|AFJ22157.1| signal recognition particle protein 54k, partial [Strelkoviacarus
aff. quadratus PBK-2011]
Length = 464
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
++ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 LTTALRSLGNATIINQEVLDNLLKEICTALIESDVNIVLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LD G + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILTAVFKELYKLLDSGAKLWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP++FIGTGEH+D FE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPILFIGTGEHIDAFEPFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ ++ +LL+KL G+FT+R M+
Sbjct: 303 -LKLEDTEDLLEKLRHGDFTIRDMY 326
>gi|308462623|ref|XP_003093593.1| hypothetical protein CRE_02627 [Caenorhabditis remanei]
gi|308249610|gb|EFO93562.1| hypothetical protein CRE_02627 [Caenorhabditis remanei]
Length = 496
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/334 (61%), Positives = 264/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ T+I+E+ L+ L E+ AL+++DV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAIGKLGQNTVINEEELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG +F P KGK +V MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTAFQPTKGKRNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQEA+LFEEM QVS A PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 241 DVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G +D ++++ D + EL+ +L +G FTLR M+
Sbjct: 301 AGLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMY 333
>gi|386697519|gb|AFJ22220.1| signal recognition particle protein 54k, partial [Promyialges sp.
AD1177]
Length = 464
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 262/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDP + P K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPEVKVWQPVKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +D EL++KL G FT+R M+
Sbjct: 303 -LKLDDNEELIEKLKHGEFTIRDMY 326
>gi|386697163|gb|AFJ22042.1| signal recognition particle protein 54k, partial [Roubikia sp.
AD863]
Length = 453
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/316 (64%), Positives = 258/316 (81%), Gaps = 1/316 (0%)
Query: 19 NATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQA 78
NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A
Sbjct: 1 NATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMMA 60
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+F EL ++LDP + P KGK ++IMFVGLQG GKTTTCTK AY++ KKGWK ALVCAD
Sbjct: 61 VFRELVRLLDPDVAPWQPIKGKTNIIMFVGLQGIGKTTTCTKMAYHYMKKGWKCALVCAD 120
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
TFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE
Sbjct: 121 TFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQE 180
Query: 199 AALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGG 258
+LFEEM +S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGG
Sbjct: 181 NSLFEEMLAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGG 240
Query: 259 ALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPE 318
ALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D E
Sbjct: 241 ALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEE 299
Query: 319 LLQKLSEGNFTLRIMF 334
L++KL G FTLR M+
Sbjct: 300 LIEKLKHGEFTLRDMY 315
>gi|225714310|gb|ACO13001.1| Signal recognition particle 54 kDa protein [Lepeophtheirus
salmonis]
Length = 508
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 263/334 (78%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATI+DE+VLN L E+ ALL+ADV +LV +++ N++ ++
Sbjct: 1 MVLADLGRKINNALNSLSKATIVDEEVLNGMLKELCAALLEADVNIRLVAKLRENVRGVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++A G NKR+II++A++ EL K++DPG +TPKKGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEMAQGLNKRQIIKEAVYLELVKLVDPGVEPYTPKKGKSNVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+QKKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV FK
Sbjct: 121 LAWYYQKKGWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEPDPVVIANEGVNMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH QE ALFEEM VS A NPD +IFVMD+SIGQA QA+AFK+ V
Sbjct: 181 EEGFEIIIVDTSGRHYQEDALFEEMLAVSNAVNPDNIIFVMDASIGQACEAQARAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI +K+D HAKGGGALSAVAATKSPV+FIGTGEH+D+FE F KPFV +LLGMGD
Sbjct: 241 DVGSVITSKLDSHAKGGGALSAVAATKSPVVFIGTGEHIDDFEPFKTKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G + K+ E + +L+ K+ G +T+R M+
Sbjct: 301 VGLIKKVEE-CNFENNEDLINKIKHGEYTIRDMY 333
>gi|17539958|ref|NP_501507.1| Protein F21D5.7 [Caenorhabditis elegans]
gi|3876111|emb|CAA91040.1| Protein F21D5.7 [Caenorhabditis elegans]
Length = 496
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 264/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ +T+I+E L+ L E+ AL+++DV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAIGKLGQSTVINEGELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG FTP KG+ +V MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTPFTPTKGRRNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRHKQEA+LFEEM QVS A PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 181 QEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 241 DVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G +D ++++ D + EL+ +L +G FTLR M+
Sbjct: 301 AGLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMY 333
>gi|225710178|gb|ACO10935.1| Signal recognition particle 54 kDa protein [Caligus rogercresseyi]
Length = 509
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/334 (61%), Positives = 263/334 (78%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATI+DE+VLN L E+ ALL+ADV +LV +++ N++ ++
Sbjct: 1 MVLADLGRKINNALSSLSKATIVDEEVLNGMLKELCAALLEADVNIRLVAKLRENVRGVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++A G NKR+II++A++ EL K++DPG F PKKG+ +VIMFVGLQ SGKTTTCTK
Sbjct: 61 NFEEMAQGLNKRQIIKEAVYLELVKLVDPGVEPFVPKKGRANVIMFVGLQDSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+QKKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV TFK
Sbjct: 121 LAWYYQKKGWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEPDPVVIANEGVNTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH QE ALFEEM VS A NPD +IFVMD+SIGQA Q++AFK+ V
Sbjct: 181 EEGFEIIIVDTSGRHYQEDALFEEMLAVSNAVNPDNIIFVMDASIGQACEAQSRAFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI++K+D HAKGGGALSAVAATKSPV+FIGTGEH+D+FE F KPFV +LLGMGD
Sbjct: 241 DVGSVIISKLDSHAKGGGALSAVAATKSPVVFIGTGEHIDDFEPFKTKPFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G + K+ E + +L+ K+ G +T+R M+
Sbjct: 301 VGLIKKVEE-CNFENNEDLINKIKHGEYTIRDMY 333
>gi|268564306|ref|XP_002647138.1| Hypothetical protein CBG16436 [Caenorhabditis briggsae]
Length = 496
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/334 (61%), Positives = 263/334 (78%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ T+I+E+ L+ L E+ AL+++DV +LV++++ N+K +
Sbjct: 1 MVLADLGRKIRNAIGKLGQNTVINEEELDLMLKEVCTALIESDVHIRLVKQLKDNVKNAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG FTP KGK +V MFVGLQGSGKTTTC+K
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTPFTPTKGKRNVFMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQEA+LFEEM QVS A PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 241 DVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G +D ++++ D + EL+ +L +G FTLR M+
Sbjct: 301 AGLVDMVNDIGISDNK-ELVGRLKQGQFTLRDMY 333
>gi|386697253|gb|AFJ22087.1| signal recognition particle protein 54k, partial [Alcedinectes
alcyon]
Length = 458
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 200/322 (62%), Positives = 260/322 (80%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NA II+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNAPIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL ++LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIMMAVFKELVRLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
++ EL++KL G FT+R M+
Sbjct: 301 LEDNEELIEKLKHGEFTIRDMY 322
>gi|340508125|gb|EGR33903.1| signal recognition particle 54 kda protein srp54, putative
[Ichthyophthirius multifiliis]
Length = 536
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/331 (61%), Positives = 263/331 (79%), Gaps = 1/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A+ +++NA +ID+K+LN+ LNEI+ ALLQ+DV K V++++ NI
Sbjct: 1 MVLAELGQKINNALSKLNNAQVIDDKILNQVLNEISIALLQSDVNAKFVKKLKDNILVQF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + + N R++IQQ + EL MLD K F PK+G+P++IMFVGLQG GKTTTCTK
Sbjct: 61 KMQE-SESVNMRKMIQQLVIKELTAMLDSQKKPFIPKRGRPNIIMFVGLQGVGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y QKKGW+ ALVCADTFRAGAFDQLKQNATK ++PFYGSY+E+D IA EGV TFK
Sbjct: 120 YANYWQKKGWRTALVCADTFRAGAFDQLKQNATKIRVPFYGSYSETDSSIIAEEGVRTFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSG H+QEA LFEEM+ VS A NPD IFVMD S+GQA +DQA AF+Q+V
Sbjct: 180 KENYEIIIVDTSGTHRQEAELFEEMKLVSAAVNPDECIFVMDGSVGQACYDQASAFRQAV 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH D+ E FD + F+ RLLG+GD
Sbjct: 240 NVGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHFDDLEPFDPQSFIKRLLGLGDI 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G K+ EV+ + QQP+L+ +++EG F++R
Sbjct: 300 AGLFQKVTEVIDVKQQPQLINRIAEGQFSIR 330
>gi|386697255|gb|AFJ22088.1| signal recognition particle protein 54k, partial [Hypodectes sp.
AD946]
Length = 459
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 199/322 (61%), Positives = 261/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL ++LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIMMAVFKELGRLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+L+++VMD+SIGQA QA+AFK V VGA+I+TK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAAT SP+IFIGTGEH+DEFE F+VK F+S+LLGMGD G +DK++E +
Sbjct: 242 HAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFNVKSFISKLLGMGDIEGLIDKVNE-LK 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
++ EL++KL G FT+R M+
Sbjct: 301 LEDNEELIEKLKHGEFTIRDMY 322
>gi|386697205|gb|AFJ22063.1| signal recognition particle protein 54k, partial [Horstia glabra]
Length = 444
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 253/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV +LV++++ N++ +++ D++AAG NKRR+I A+FNEL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFNELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 ISAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATG 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697577|gb|AFJ22249.1| signal recognition particle protein 54k, partial [Proctophyllodes
dolephyes]
Length = 444
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/307 (66%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697567|gb|AFJ22244.1| signal recognition particle protein 54k, partial [Ingrassia
philomachi]
Length = 444
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/307 (66%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA GVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASGGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIEPDLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|403264840|ref|XP_003924676.1| PREDICTED: signal recognition particle 54 kDa protein [Saimiri
boliviensis boliviensis]
Length = 567
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/313 (64%), Positives = 256/313 (81%), Gaps = 1/313 (0%)
Query: 22 IIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFN 81
+++ +VLN L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F
Sbjct: 14 LVESRVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFK 73
Query: 82 ELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFR 141
EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFR
Sbjct: 74 ELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 133
Query: 142 AGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAAL 201
AGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +L
Sbjct: 134 AGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSL 193
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
FEEM QV+ A PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALS
Sbjct: 194 FEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALS 253
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D L++
Sbjct: 254 AVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIE 312
Query: 322 KLSEGNFTLRIMF 334
KL G FTLR M+
Sbjct: 313 KLKHGQFTLRDMY 325
>gi|386697611|gb|AFJ22266.1| signal recognition particle protein 54k, partial [Monojoubertia
hemiphylla]
Length = 433
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/307 (66%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697323|gb|AFJ22122.1| signal recognition particle protein 54k, partial [Gabucinia
delibata]
Length = 444
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697547|gb|AFJ22234.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD768]
Length = 444
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697135|gb|AFJ22028.1| signal recognition particle protein 54k, partial [Suidasia
nesbitti]
Length = 433
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+Q+KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGRTNVIMFVGLQGIGKTTTCTKMAYYYQRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697335|gb|AFJ22128.1| signal recognition particle protein 54k, partial [Hieracolichus
nisi]
Length = 444
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697213|gb|AFJ22067.1| signal recognition particle protein 54k, partial [Acarus siro]
gi|386697215|gb|AFJ22068.1| signal recognition particle protein 54k, partial [Acarus immobilis]
Length = 444
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/307 (66%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++K+++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKQLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+I+VMD+SIGQA QA+AF V VGAVIVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|242055585|ref|XP_002456938.1| hypothetical protein SORBIDRAFT_03g045950 [Sorghum bicolor]
gi|241928913|gb|EES02058.1| hypothetical protein SORBIDRAFT_03g045950 [Sorghum bicolor]
Length = 487
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/372 (63%), Positives = 285/372 (76%), Gaps = 36/372 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
MVLAQLG S+ A+ QM+ +T++D+KV+ +CLN+++RALLQADV+F+ VR +Q +I +
Sbjct: 1 MVLAQLGESLVGALAQMAKSTVVDDKVVVDCLNDVSRALLQADVRFETVRAVQASIGSAV 60
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDP------GKPS--FTPKKG-KP-SVIMFVGL 109
VNL LAAG ++RR I+ A+ +EL +MLDP GKP F P+KG KP SV+MFVGL
Sbjct: 61 VNLQSLAAGTDRRRAIKHAVVDELRRMLDPAAGGGTGKPPPFFVPRKGRKPASVVMFVGL 120
Query: 110 QGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
QGSGKTTTC KYA YH++ G+ PALVCADTFRAGA DQL+QNA KA IPFYGSYTESDPV
Sbjct: 121 QGSGKTTTCVKYADYHRRTGFSPALVCADTFRAGALDQLRQNAAKAGIPFYGSYTESDPV 180
Query: 170 RIAVEGVETFKK-------ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMD 222
R+AVEGV+ F+ E CDLI+VDTSGRH QEAAL EEMRQ++EAT PDLV+ VMD
Sbjct: 181 RVAVEGVDRFRNADQAAAAEGCDLIVVDTSGRHSQEAALLEEMRQLAEATRPDLVVLVMD 240
Query: 223 SSIGQAAFDQAQAFKQSVSVGAVI-VTKMDGHAK-GGGALSAVAATKSPVIFIGTGEHMD 280
++IGQAAFDQA AFKQSV VGAVI VTKMDGHAK GGGALSAVAATKSPVIFIGTGEH+
Sbjct: 241 ATIGQAAFDQALAFKQSVEVGAVIVVTKMDGHAKGGGGALSAVAATKSPVIFIGTGEHIA 300
Query: 281 EFEVFDVKPFVS-RLLGMGDWSGFMDKIHE-----VVPMDQ-----QPELLQKLS--EG- 326
+ E FD + FVS RLLGMGD GFMDKI + + DQ + +LL +L+ +G
Sbjct: 301 DLEAFDARSFVSRRLLGMGDLPGFMDKIEDAMTTMTMAADQGQEGLEQQLLHELTTVKGA 360
Query: 327 --NFTLRIMFSL 336
FTLR ++SL
Sbjct: 361 SFTFTLRALYSL 372
>gi|118370390|ref|XP_001018396.1| signal recognition particle 54 kDa protein 1, SRP54 [Tetrahymena
thermophila]
gi|89300163|gb|EAR98151.1| signal recognition particle 54 kDa protein 1, SRP54 [Tetrahymena
thermophila SB210]
Length = 518
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/331 (61%), Positives = 264/331 (79%), Gaps = 1/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+QQ++ A +IDE++LN+ L EI ALLQ+DV K V ++++NI
Sbjct: 1 MVLADLGKRINNALQQLNKAPVIDEELLNQVLKEIQLALLQSDVNVKYVAKLKSNIIMKF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D + G N +++IQQA+ EL +MLD K F PK+GKP+V+MFVGLQG+GKTTTCTK
Sbjct: 61 KMED-SQGVNLKKMIQQAVVQELTQMLDSNKKPFVPKRGKPNVVMFVGLQGAGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAY+ QKKGW+ AL+CADTFRAGAFDQLKQNATK ++PFYGSY+E+DPV IA EGV+ FK
Sbjct: 120 YAYHWQKKGWRTALICADTFRAGAFDQLKQNATKVRVPFYGSYSETDPVAIAEEGVKHFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN ++IIVDTSGRHKQE+ LF+EM+QV A NPD IFVMD SIGQA +DQAQAF+ +V
Sbjct: 180 KENYEMIIVDTSGRHKQESELFDEMKQVQAAVNPDECIFVMDGSIGQACYDQAQAFRNAV 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH ++ E F+ + FV RLLG+GD
Sbjct: 240 NVGSVIITKLDGHAKGGGALSAVAATESPIIFIGTGEHFEDLEPFNPESFVKRLLGLGDI 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G + + E V M+ Q + + +++G F++R
Sbjct: 300 KGMITTVTEAVDMETQGKAIANITKGQFSIR 330
>gi|386697221|gb|AFJ22071.1| signal recognition particle protein 54k, partial [Sancassania aff.
sphaerogaster AD361]
Length = 433
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697121|gb|AFJ22021.1| signal recognition particle protein 54k, partial [Hormosianoetus
mallotae]
Length = 432
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI ALL++DV LV++++ N++K+++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALLESDVNILLVKKLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAADGVSKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAATSPDLVVYVMDASIGQACESQAKAFKSKVDIGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SPVIFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPVIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697181|gb|AFJ22051.1| signal recognition particle protein 54k, partial [aff. Alabidopus
sp. AD591]
Length = 433
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|281342878|gb|EFB18462.1| hypothetical protein PANDA_011888 [Ailuropoda melanoleuca]
Length = 488
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/309 (65%), Positives = 253/309 (81%), Gaps = 1/309 (0%)
Query: 26 KVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCK 85
+VLN L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F EL K
Sbjct: 10 QVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVK 69
Query: 86 MLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAF 145
++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAF
Sbjct: 70 LVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAF 129
Query: 146 DQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEM 205
DQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM
Sbjct: 130 DQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEM 189
Query: 206 RQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAA 265
QV+ A PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAA
Sbjct: 190 LQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAA 249
Query: 266 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 325
TKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D L++KL
Sbjct: 250 TKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKH 308
Query: 326 GNFTLRIMF 334
G FTLR M+
Sbjct: 309 GQFTLRDMY 317
>gi|386697423|gb|AFJ22172.1| signal recognition particle protein 54k, partial [Diplaegidia
columbae]
Length = 444
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/307 (66%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L E L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LEELLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL+ KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIAKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697199|gb|AFJ22060.1| signal recognition particle protein 54k, partial [Glycyphagus
hypudaei complex sp. PBK-2011]
Length = 444
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 253/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A++ EL K+L
Sbjct: 1 LDTLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMTAVYQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVQAYQPVKGKANIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVDKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S AT P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAATQPHLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697149|gb|AFJ22035.1| signal recognition particle protein 54k, partial [Vidia sp. AD452]
Length = 432
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR++I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMAAGLNKRKMIMTAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KK WK +LVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKNWKCSLVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFANENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A PDL+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAIQPDLIVYVMDASIGQACEAQAKAFKGKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697187|gb|AFJ22054.1| signal recognition particle protein 54k, partial [Chortoglyphus sp.
AD792]
Length = 444
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697487|gb|AFJ22204.1| signal recognition particle protein 54k, partial [Otodectes
cynotis]
Length = 444
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/307 (65%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I +A+F ELCK+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRNVIDFDEMAAGLNKRRMIMRAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKTWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A DLVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQSDLVIYVMDASIGQACEPQARAFKAKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++K+ G
Sbjct: 241 SPIIFIGTGEHIDEFESFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKIKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|402589104|gb|EJW83036.1| signal recognition particle protein SRP54 [Wuchereria bancrofti]
Length = 503
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/338 (61%), Positives = 262/338 (77%), Gaps = 5/338 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKQLKDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCTK 120
Query: 121 YAYY----HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+ KKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA GV
Sbjct: 121 SLFLVGILLPKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVTIAANGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
+ FK++ ++IIVDTSGRHKQEA+LFEEM QVS A NP ++FVMD+SIGQA QA+AF
Sbjct: 181 DKFKEDGFEIIIVDTSGRHKQEASLFEEMLQVSNAVNPSNIVFVMDASIGQACEAQARAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
++V VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLG
Sbjct: 241 SETVDVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MGD G + K++E+ D + EL+++L G FTLR M+
Sbjct: 301 MGDIEGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMY 337
>gi|386697107|gb|AFJ22014.1| signal recognition particle protein 54k, partial [Bonomoia sp.
AD653]
Length = 444
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/307 (65%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL++ADV LV++++ N+K +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALIEADVNILLVKKLRENVKNVIDFDEMAAGLNKRRMIMMAVFKELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG +TP KG+ +V+MFVGLQG GKTTT TK AYY+QK+G K ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWTPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYQKRGLKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IP+YGSYTESDPV IA EGV FK++ DL+IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPYYGSYTESDPVIIAAEGVRIFKEKGFDLVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ ATNPDLVI+VMD+SIGQA QA+AFK V +GA+IVTK+DGHA+GGGALSAVAATK
Sbjct: 181 IQAATNPDLVIYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDGHARGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G ++K++E + +D+ EL+ KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFRVKPFISKLLGMGDIEGLIEKVNE-LKLDENEELINKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697171|gb|AFJ22046.1| signal recognition particle protein 54k, partial [Chaetodactylus
lithurgi]
Length = 431
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL ++L
Sbjct: 1 LDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697233|gb|AFJ22077.1| signal recognition particle protein 54k, partial [Naiacus sp.
AD305]
Length = 433
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697237|gb|AFJ22079.1| signal recognition particle protein 54k, partial [Askinasia sp.
AD304]
Length = 433
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697111|gb|AFJ22016.1| signal recognition particle protein 54k, partial [Aphodanoetus
teinophallus]
Length = 444
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 253/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L E+ AL+++DV LV++++ NI+ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEVCAALIESDVNIMLVKKLRENIRNVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P + P KG+ +V+MFVGLQG GKTTT TK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPQWAPVKGRTNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F+KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAADGVNKFQKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAATSPDLVVYVMDASIGQACEAQARAFKSKVDIGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFESFKVKPFISKLLGMGDIEGLIDKVNE-LKLEENDELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697235|gb|AFJ22078.1| signal recognition particle protein 54k, partial [Naiadacarus
arboricola]
Length = 433
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697527|gb|AFJ22224.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD798]
Length = 444
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/307 (66%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D+ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDENDELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697531|gb|AFJ22226.1| signal recognition particle protein 54k, partial [Dermationidae sp.
AD695]
Length = 444
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/307 (66%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D+ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDENDELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697211|gb|AFJ22066.1| signal recognition particle protein 54k, partial [Diadasiopus
eickworti]
Length = 433
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++K+++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKQLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTSENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AF V VGAVIVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFSSKVDVGAVIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697191|gb|AFJ22056.1| signal recognition particle protein 54k, partial [Nycteriglyphites
pennsylvanicus]
Length = 444
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICKALIESDVNIMLVKKLRENVRSVIDFEEMAAGLNKRRMIMMAVFTELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPVKGKVNVIMFVGLQGIGKTTTCTKMAYYYMRKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSY ESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYAESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAIQPNLVVYVMDASIGQACESQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697217|gb|AFJ22069.1| signal recognition particle protein 54k, partial [Cosmoglyphus sp.
AD702]
Length = 444
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697197|gb|AFJ22059.1| signal recognition particle protein 54k, partial [Marsupialichus
brasiliensis]
Length = 433
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 253/307 (82%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A++ EL K+L
Sbjct: 1 LDTLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMTAVYQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVQAWQPVKGKANIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFINENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S AT P L+++VMD+SIGQA +QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAATQPHLIVYVMDASIGQACENQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697241|gb|AFJ22081.1| signal recognition particle protein 54k, partial [Ewingia
coenobitae]
Length = 444
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697219|gb|AFJ22070.1| signal recognition particle protein 54k, partial [Sancassania
nesbitti]
Length = 433
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697401|gb|AFJ22161.1| signal recognition particle protein 54k, partial [Neumannia sp.
AD1196]
Length = 444
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/307 (65%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|301120250|ref|XP_002907852.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
gi|262102883|gb|EEY60935.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
Length = 511
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/334 (58%), Positives = 265/334 (79%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG + A+ +++ T++D++V N L EI ALL++DVQ KLVR+++ N+K V
Sbjct: 1 MVLAELGSKLQGALAKLNRTTVVDDEVFNALLKEICGALLESDVQVKLVRQLRDNVKLAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+D ++G N+RR+IQ+++ +++ +ML+P + KKG+ +VIMFVGLQGSGKTT+ K
Sbjct: 61 NLEDASSGVNRRRLIQKSVVDQIVQMLEPEAQPYKMKKGQSNVIMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+++Q+KGWK +VCADTFRAGAFDQLKQN+TK +IPFYGSYTE+DPVRIA EGV F+
Sbjct: 121 FAHFYQRKGWKTCMVCADTFRAGAFDQLKQNSTKLRIPFYGSYTEADPVRIAEEGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN +LI+VDTSGRHKQE LF EMR+VS A PD V+FVMDS+IGQA FDQA AF+++V
Sbjct: 181 AENYELILVDTSGRHKQETDLFAEMREVSAAVQPDDVVFVMDSTIGQAVFDQASAFRETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH +FE F+ + FVSRL+GMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFADFESFNAQSFVSRLMGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G M+++ +D Q E+++K +G FTLR M+
Sbjct: 301 RGLMEEVKTSGMLDNQEEMVEKFQKGVFTLRDMY 334
>gi|386697479|gb|AFJ22200.1| signal recognition particle protein 54k, partial [Paralgopsis sp.
AD1163]
Length = 444
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/307 (65%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++++++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697459|gb|AFJ22190.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD747]
Length = 444
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/307 (65%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++++++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|145503400|ref|XP_001437676.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404829|emb|CAK70279.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/334 (60%), Positives = 265/334 (79%), Gaps = 7/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG SI+ A+Q++S A ++DE ++++ L EI ALL+ADV K +++++ ++K
Sbjct: 1 MVLAELGKSINAALQKLSKAPVVDEALVDQILGEIAMALLKADVNAKFIKKLREDVKMEF 60
Query: 58 KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
K+ +++ N +++IQ+A+ + L +ML+ + F PKKGK +VIMFVGLQGSGKTTT
Sbjct: 61 KLCEEENI----NHQKLIQKAVVDGLTRMLESDRKPFQPKKGKQNVIMFVGLQGSGKTTT 116
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKYAYY+QKKGWK ALVCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV+IA EGV
Sbjct: 117 CTKYAYYYQKKGWKVALVCADTFRAGAFDQLKQNATKVRVPFYGSYTEADPVQIAQEGVN 176
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKKE ++IIVDTSGRHKQE LFEEM+QV A PD ++FVMDSSIGQA FDQA AFK
Sbjct: 177 VFKKEAFEIIIVDTSGRHKQENDLFEEMKQVEAAVKPDDIVFVMDSSIGQACFDQALAFK 236
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++V+VG+VI+TK+DGHAKGGGALSAVAAT+SP++FIG GEH D+ E F+ FV RLLG+
Sbjct: 237 KAVNVGSVIITKLDGHAKGGGALSAVAATESPIVFIGEGEHFDDLESFEASSFVRRLLGL 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
GD + + +VV M QP+L+QKL EG F++R
Sbjct: 297 GDINKLFQSVKDVVNMRDQPQLIQKLKEGKFSIR 330
>gi|386697223|gb|AFJ22072.1| signal recognition particle protein 54k, partial [Acotyledon
paradoxa]
Length = 433
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEAFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697685|gb|AFJ22303.1| signal recognition particle protein 54k, partial [Trichoecius
tenax]
Length = 433
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 248/307 (80%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV KLV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFNEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQENTLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IQAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATN 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697193|gb|AFJ22057.1| signal recognition particle protein 54k, partial [Oryzomyopus sp.
AD729]
Length = 444
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICSALIESDVNIILVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG S+ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKSWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFINENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|348677486|gb|EGZ17303.1| hypothetical protein PHYSODRAFT_360478 [Phytophthora sojae]
Length = 511
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/334 (58%), Positives = 266/334 (79%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG + A+ +++ T++D++V + L EI ALL++DVQ KLVR+++ N+K V
Sbjct: 1 MVLAELGSKLQGALAKLNRTTVVDDEVFSALLKEICGALLESDVQVKLVRQLRDNVKLAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+D ++G N+RR+IQ+++ ++L +ML+P + KKG+ +VIMFVGLQGSGKTT+ K
Sbjct: 61 SLEDASSGVNRRRLIQKSVVDQLVQMLEPEAQPYKMKKGQSNVIMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+++Q+KGWK +VCADTFRAGAFDQLKQN+TK +IPFYGSYTE+DPVRIA EGV F+
Sbjct: 121 FAHHYQRKGWKTCMVCADTFRAGAFDQLKQNSTKLRIPFYGSYTEADPVRIAEEGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN +LI+VDTSGRHKQEA LF EMR+VS A PD V+FVMDS+IGQA FDQA AF+++V
Sbjct: 181 AENYELILVDTSGRHKQEADLFAEMREVSAAVQPDDVVFVMDSTIGQAVFDQASAFRETV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH +FE F+ + FVSRL+GMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFADFESFNAQSFVSRLMGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G M+++ +D Q E+++K +G FTLR M+
Sbjct: 301 RGLMEEVKTSGMLDNQEEMVEKFQKGVFTLRDMY 334
>gi|386697229|gb|AFJ22075.1| signal recognition particle protein 54k, partial [Boletoglyphus
extremiorientalis]
gi|386697231|gb|AFJ22076.1| signal recognition particle protein 54k, partial [Boletoglyphus
ornatus]
Length = 444
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGIKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAAEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAIQPQLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697125|gb|AFJ22023.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD357]
Length = 444
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPQQIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697227|gb|AFJ22074.1| signal recognition particle protein 54k, partial [Capillaroglyphus
polypori]
Length = 444
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGIKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAIQPQLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697161|gb|AFJ22041.1| signal recognition particle protein 54k, partial [Fusohericia sp.
AD660]
Length = 445
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/308 (65%), Positives = 251/308 (81%), Gaps = 2/308 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N+K +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICKALIESDVNILLVKKLRENVKSVIDFDEMAAGLNKRRMIMTAVFQELVKLL 60
Query: 88 DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
D K F P +GKP+VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFD
Sbjct: 61 DSDVKEPFQPVRGKPNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFD 120
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKA+IPFYGSYTESDPV IA EGVE F EN D+IIVDTSGRHKQE++LFEEM
Sbjct: 121 QLKQNATKARIPFYGSYTESDPVVIAHEGVEKFTNENFDIIIVDTSGRHKQESSLFEEML 180
Query: 207 QVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 266
+S A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 AISSAIQPNLVVYVMDASIGQACESQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 240
Query: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 326
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 KSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHG 299
Query: 327 NFTLRIMF 334
FTLR M+
Sbjct: 300 EFTLRDMY 307
>gi|386697123|gb|AFJ22022.1| signal recognition particle protein 54k, partial [Histiostoma
inquilinum]
Length = 432
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +V+MFVGLQG GKTTT TK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ AT+PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAATSPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697277|gb|AFJ22099.1| signal recognition particle protein 54k, partial [Falculifer sp.
AD1244]
Length = 444
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/307 (64%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACEAQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697195|gb|AFJ22058.1| signal recognition particle protein 54k, partial [Marmosopus sp.
AD727]
Length = 433
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/307 (64%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICSALIESDVNIILVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+L+++VMD+SIGQA QA+AFK V VGA+I+TK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIITKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|386697133|gb|AFJ22027.1| signal recognition particle protein 54k, partial [Tortonia sp.
AD560]
Length = 432
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/307 (64%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACEGQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697225|gb|AFJ22073.1| signal recognition particle protein 54k, partial [Aleuroglyphus
ovatus]
Length = 433
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 ISAAVQPHQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FTLR M+
Sbjct: 300 FTLRDMY 306
>gi|281206952|gb|EFA81136.1| signal recognition particle 54 kDa subunit [Polysphondylium
pallidum PN500]
Length = 504
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/333 (61%), Positives = 262/333 (78%), Gaps = 2/333 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A+ MSN+TII+E+ ++ L E+ AL +ADV KL+ +M+ NIK+ +
Sbjct: 1 MVLADLGNQISSALANMSNSTIINEETIDTLLKEVGNALSRADVSLKLIIQMRKNIKEQL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKRRII++ +F+EL K+LDPG + P KGK ++IMFVGLQG+GKTT+ TK
Sbjct: 61 KLDAMAAGLNKRRIIKKVVFDELIKLLDPGVAPWKPTKGKSNIIMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++++KGW A+VCADTFRAGAFDQLK NATKAKIPFYGS T+ DPV +A +GV+ FK
Sbjct: 121 LASFYKRKGWATAMVCADTFRAGAFDQLKHNATKAKIPFYGSDTDRDPVAVAKKGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ ++IIVDTSGRHKQE LF+EM+++ PD VIFVMDSSIGQAAFDQA AFK SV
Sbjct: 181 KDGAEIIIVDTSGRHKQEEELFKEMKEIETVVKPDNVIFVMDSSIGQAAFDQATAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVG+VI+TKMDG++KGGGA+SAVAATKSP+IFIGTGEH+ + ++FD FVS+LLGMGD
Sbjct: 241 SVGSVIITKMDGNSKGGGAISAVAATKSPIIFIGTGEHIPDLDLFDASSFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G M+ I +VVP D + L++++ G FT R M
Sbjct: 301 KGMMNMIADVVPKDTKA--LEEIASGKFTFRNM 331
>gi|386697263|gb|AFJ22092.1| signal recognition particle protein 54k, partial [Kramerella sp.
AD967]
Length = 444
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/307 (64%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697521|gb|AFJ22221.1| signal recognition particle protein 54k, partial [Knemidokoptes sp.
AD845]
Length = 460
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DG
Sbjct: 182 GRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDG 241
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
HAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E+
Sbjct: 242 HAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDVEGLIDKVNELK- 300
Query: 313 MDQQPELLQKLSEGNFTLRIMF 334
+++ EL++KL G FT+R M+
Sbjct: 301 LEENEELIEKLKHGEFTIRDMY 322
>gi|386697313|gb|AFJ22117.1| signal recognition particle protein 54k, partial [Plutarchusia
chelopus]
gi|386697315|gb|AFJ22118.1| signal recognition particle protein 54k, partial [Syringobiidae
gen. sp. AD850]
Length = 444
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/307 (63%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPIKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNA KA+IPFYGSYTESDPV IA EGVE FK+E ++IIVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNAHKARIPFYGSYTESDPVVIASEGVEKFKEEGFEIIIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +D+++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDRVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697291|gb|AFJ22106.1| signal recognition particle protein 54k, partial [Geranolichus
canadensis]
Length = 444
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/307 (64%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICMALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPDVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697267|gb|AFJ22094.1| signal recognition particle protein 54k, partial [Freyana anatina]
Length = 433
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/307 (63%), Positives = 250/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATN 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNGELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|145351050|ref|XP_001419900.1| IISP family transporter: Signal recognition particle 54 kDa protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
gi|144580133|gb|ABO98193.1| IISP family transporter: Signal recognition particle 54 kDa protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
Length = 513
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 266/347 (76%), Gaps = 13/347 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A++ ++ ++DE++L+ CL +IT ALL +DV LV M+ NI + V
Sbjct: 1 MVLNDLGNKIASALRSLNAHVVVDEELLDACLKDITNALLASDVAVPLVVRMKKNIVREV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG-------------KPSFTPKKGKPSVIMFV 107
+LD++A+G N ++++++A+F EL +L+ G ++TPKKGK +V+MFV
Sbjct: 61 DLDNMASGMNAKKVLERAVFKELTALLNGGGDASGTKTSGTKTSGTWTPKKGKRNVVMFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTTTCTK+A+Y+ KKG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD
Sbjct: 121 GLQGAGKTTTCTKFAHYYAKKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQ 227
P IA GV+ F++E DLIIVDTSGRHKQE ALFEEMR+++ T P + IFVMDSSIGQ
Sbjct: 181 PATIAAAGVKRFEEEKSDLIIVDTSGRHKQEEALFEEMREIASVTEPTMTIFVMDSSIGQ 240
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
+A DQA+AF +V VG VI+TK+DGHAKGGGA+SAV+ TK+P++FIGTGEH+ E E F+
Sbjct: 241 SASDQAKAFASTVDVGGVIMTKLDGHAKGGGAISAVSETKAPILFIGTGEHIGELEAFET 300
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
FVS+LLGMGD G ++K++E+VP + +L++ G FT+R+++
Sbjct: 301 TSFVSKLLGMGDIKGLVEKMNEIVPEESAEKLMEAFGSGTFTMRLLY 347
>gi|145514351|ref|XP_001443086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410447|emb|CAK75689.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/334 (59%), Positives = 265/334 (79%), Gaps = 7/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG SI+ A+Q+++ A ++DE ++++ L EI ALL+ADV K +++++ ++K
Sbjct: 1 MVLAELGKSINAALQKLNKAPVVDEALVDQILGEIAMALLKADVNAKFIKKLREDVKMEF 60
Query: 58 KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
K+ +++ N +++IQ+A+ + L +ML+ + F PKKGK +VIMFVGLQGSGKTTT
Sbjct: 61 KLCEEENI----NHQKLIQKAVVDGLTRMLESDRKPFQPKKGKQNVIMFVGLQGSGKTTT 116
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKYAYY+QKKGWK ALVCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV+I+ EGV
Sbjct: 117 CTKYAYYYQKKGWKVALVCADTFRAGAFDQLKQNATKVRVPFYGSYTEADPVQISQEGVN 176
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKKE ++IIVDTSGRHKQE LFEEM+QV A PD ++FVMDSSIGQA +DQA AFK
Sbjct: 177 VFKKEAFEIIIVDTSGRHKQENDLFEEMKQVEAAVKPDDIVFVMDSSIGQACYDQALAFK 236
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++V+VG+VI+TK+DGHAKGGGALSAVAAT+SP++FIG GEH D+ E F+ FV RLLG+
Sbjct: 237 KAVNVGSVIITKLDGHAKGGGALSAVAATESPIVFIGEGEHFDDLESFEASSFVRRLLGL 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
GD + + +VV M QP+L+QKL EG F++R
Sbjct: 297 GDINKLFQSVKDVVNMRDQPQLIQKLKEGKFSIR 330
>gi|386697189|gb|AFJ22055.1| signal recognition particle protein 54k, partial [Aeroglyphus
robustus]
Length = 444
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/307 (64%), Positives = 248/307 (80%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFEEMAAGLNKRRMIMMAVFTELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPVKGKVNVIMFVGLQGIGKTTTCTKMAYYYMRKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+S A P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+D HAKGGGALSAVAATK
Sbjct: 181 ISAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDSHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|156554455|ref|XP_001604233.1| PREDICTED: signal recognition particle 54 kDa protein-like [Nasonia
vitripennis]
Length = 444
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/299 (65%), Positives = 248/299 (82%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S+ATII+E+VLN L EI ALL++DV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSHATIINEEVLNSMLKEICAALLESDVNIRLVKNLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ F
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQEGVDMFI 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QVS A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVSNAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
>gi|386697239|gb|AFJ22080.1| signal recognition particle protein 54k, partial [Askinasia
antillarum]
Length = 446
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/309 (64%), Positives = 250/309 (80%), Gaps = 3/309 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKG--KPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAF 145
DPG ++ P K K +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAF
Sbjct: 61 DPGVKAWQPVKANFKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAF 120
Query: 146 DQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEM 205
DQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 DQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEM 180
Query: 206 RQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAA 265
+S A P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAA
Sbjct: 181 LAISAAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAA 240
Query: 266 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 325
TKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL
Sbjct: 241 TKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKH 299
Query: 326 GNFTLRIMF 334
G FTLR M+
Sbjct: 300 GEFTLRDMY 308
>gi|386697299|gb|AFJ22110.1| signal recognition particle protein 54k, partial [Kakapolichus sp.
n. AD881]
Length = 444
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/307 (63%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICKALIESDVNITLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPDVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|313236259|emb|CBY11581.1| unnamed protein product [Oikopleura dioica]
Length = 520
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/334 (58%), Positives = 260/334 (77%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A++ + N+ +I+E VL +CL ++ ALL+ADV KLV+++ +KK +
Sbjct: 1 MVLADLGRKLTTALRSLGNSPVINEDVLKKCLKDVQSALLEADVNIKLVKQLTDGVKKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+LD++ G NKRR+IQ A++ ELC++ DPG + P KG+ SVIMFVGLQGSGKTT+C K
Sbjct: 61 DLDNIGTGLNKRRVIQTAVYKELCRICDPGVKPWKPTKGRSSVIMFVGLQGSGKTTSCIK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK A+VCADTFRAGA+DQ+KQN TKA+IPFYGS TE DP IA +GVETFK
Sbjct: 121 LAYHYQKKGWKCAVVCADTFRAGAYDQVKQNCTKARIPFYGSLTEPDPAVIAYDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD+SIGQA QA+AFK V
Sbjct: 181 KEKFDIIIVDTSGRHKQEDSLFEEMLQVNNAVEPDNIIFVMDASIGQACESQAKAFKDQV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSA+AAT+SP++FIGTGEH+DE E F+ F+ +LL MGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAIAATQSPIVFIGTGEHIDELEPFETTKFIRKLLNMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK+++ + ++ +L + L +G FTLR M+
Sbjct: 301 EGLIDKVNQ-LKLEDNEDLKKNLQKGRFTLRDMY 333
>gi|386697159|gb|AFJ22040.1| signal recognition particle protein 54k, partial [Carpoglyphus
lactis]
Length = 434
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/308 (65%), Positives = 250/308 (81%), Gaps = 2/308 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L +I +AL+++DV LV++++ N+K +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKDICKALIESDVNIMLVKKLRENVKSVIDFDEMAAGLNKRRMIMTAVFQELVKLL 60
Query: 88 DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
D K F P KGKP+VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFD
Sbjct: 61 DSDVKEPFQPVKGKPNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFD 120
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 QLKQNATKARIPFYGSYTESDPVVIAHEGVEKFVNENFEIIIVDTSGRHKQESSLFEEML 180
Query: 207 QVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 266
+S A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 AISSAIQPNLVVYVMDASIGQACESQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 240
Query: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 326
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+ E + ++ EL++KL G
Sbjct: 241 KSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVSE-LKLEDNEELIEKLKHG 299
Query: 327 NFTLRIMF 334
FTLR M+
Sbjct: 300 EFTLRDMY 307
>gi|313218053|emb|CBY41387.1| unnamed protein product [Oikopleura dioica]
Length = 502
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/334 (58%), Positives = 260/334 (77%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A++ + N+ +I+E VL +CL ++ ALL+ADV KLV+++ +KK +
Sbjct: 1 MVLADLGRKLTTALRSLGNSPVINEDVLKKCLKDVQSALLEADVNIKLVKQLTDGVKKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+LD++ G NKRR+IQ A++ ELC++ DPG + P KG+ SVIMFVGLQGSGKTT+C K
Sbjct: 61 DLDNIGTGLNKRRVIQTAVYKELCRICDPGVKPWKPTKGRSSVIMFVGLQGSGKTTSCIK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK A+VCADTFRAGA+DQ+KQN TKA+IPFYGS TE DP IA +GVETFK
Sbjct: 121 LAYHYQKKGWKCAVVCADTFRAGAYDQVKQNCTKARIPFYGSLTEPDPAVIAYDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD+SIGQA QA+AFK V
Sbjct: 181 KEKFDIIIVDTSGRHKQEDSLFEEMLQVNNAVEPDNIIFVMDASIGQACESQAKAFKDQV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+D HAKGGGALSA+AAT+SP++FIGTGEH+DE E F+ F+ +LL MGD
Sbjct: 241 DVGSVIITKLDSHAKGGGALSAIAATQSPIVFIGTGEHIDELEPFETTKFIRKLLNMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK+++ + ++ +L + L +G FTLR M+
Sbjct: 301 EGLIDKVNQ-LKLEDNEDLKKNLQKGRFTLRDMY 333
>gi|221059453|ref|XP_002260372.1| signal recognition particle [Plasmodium knowlesi strain H]
gi|193810445|emb|CAQ41639.1| signal recognition particle, putative [Plasmodium knowlesi strain
H]
Length = 500
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/334 (56%), Positives = 262/334 (78%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTSALQKLQASAVADDSAIEECLKEVIRALILADINISYLKDIKSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVD+SGRHKQE+ LFEEM+QV + NP+ ++FV+DS IGQ+ DQA AFK SV
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQVESSINPEEIVFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++G++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 TLGSIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFEKFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G + + EV+ +++QP+L+ +LS+G F LR M+
Sbjct: 301 NGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMY 334
>gi|386697309|gb|AFJ22115.1| signal recognition particle protein 54k, partial [Rectijanua sp. n.
AD629]
Length = 444
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/307 (64%), Positives = 246/307 (80%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTT TK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPIKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G MDK+ E + +D E ++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLMDKVSE-LKLDGNEEFIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|386697391|gb|AFJ22156.1| signal recognition particle protein 54k, partial [Strelkoviacarus
quadratus]
Length = 444
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/307 (64%), Positives = 249/307 (81%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICTALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMILTAVFKELYKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
D G + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DSGAKLWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAATK
Sbjct: 181 IQSAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAATK 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP++FIGTGEH+D FE F VKPF+S+LLGMGD G +DK++E + ++ +LL+KL G+
Sbjct: 241 SPILFIGTGEHIDAFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDTEDLLEKLRHGD 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|449018117|dbj|BAM81519.1| signal recognition particle recognition component SRP54
[Cyanidioschyzon merolae strain 10D]
Length = 502
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 192/333 (57%), Positives = 253/333 (75%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I +A+Q ++N ++DE L L E+ RALL+ADV K V E++ +K V
Sbjct: 1 MVLETLGTKIVKALQSLTNQVVVDETALEAALKEVARALLEADVNVKQVSELRQRVKNRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L +L G N+RR+I + +F ELC+MLDPG P + P++G+ +VIMFVGLQG+GKTT+C K
Sbjct: 61 RLAELPPGTNRRRLIHKTVFEELCRMLDPGIPPYRPQRGQSNVIMFVGLQGNGKTTSCVK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++++KG++ LVCADTFRAGAFDQL+QNAT+A++PFYG Y E+D V++A EGVE F+
Sbjct: 121 VAYFYKRKGYRTGLVCADTFRAGAFDQLRQNATRARVPFYGRYGETDAVKVASEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++I+VDTSGRHKQEAALF EM Q+ A PD VIFVMD SIGQAA+DQA+AF+Q V
Sbjct: 181 REGFEVILVDTSGRHKQEAALFAEMEQLDRALTPDHVIFVMDGSIGQAAYDQARAFQQRV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TKMDGHA+GGGALSAVAAT SP++F+GTGEH+D+ E F V+ FV RLLGMGD
Sbjct: 241 RVGSVILTKMDGHARGGGALSAVAATHSPIVFLGTGEHLDDLEEFQVQSFVGRLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G + I E + E + ++S+G TLR M
Sbjct: 301 RGLVSTIAEADLENPDEEQMNRISQGILTLRDM 333
>gi|124809679|ref|XP_001348651.1| signal recognition particle SRP54, putative [Plasmodium falciparum
3D7]
gi|23497549|gb|AAN37090.1| signal recognition particle SRP54, putative [Plasmodium falciparum
3D7]
gi|326787503|gb|AEA07718.1| signal recognition particle 54 [Plasmodium falciparum]
Length = 500
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/334 (58%), Positives = 259/334 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG I+ A +++ +T+ D+ V+ ECL EI RAL+ +D+ ++++++NIK +
Sbjct: 1 MVLTELGTQITNAFRKLQTSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK++++Q+ + EL K+L+ K + P KGK +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDIYGNNKKKLVQKYVVEELIKLLEGKKEGYNPVKGKRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ DLIIVD+SGRHKQE LFEEM QV + P+ +IFV+DS IGQ+ DQA AFK SV
Sbjct: 181 KDKYDLIIVDSSGRHKQENELFEEMIQVENSIQPEEIIFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
S+G++I+TK+DGHAKGGGALSAVAAT P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 SLGSIIITKIDGHAKGGGALSAVAATGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
SG + I EV+ +D+QPEL+ +LS+G F LR M+
Sbjct: 301 SGLVSTIKEVIDIDKQPELMNRLSKGKFVLRDMY 334
>gi|386697257|gb|AFJ22089.1| signal recognition particle protein 54k, partial [Hypoderatidae
gen. sp. AD887]
Length = 463
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 263/325 (80%), Gaps = 1/325 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELGRLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFSNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE++LFEEM + A P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 183 DTSGRHKQESSLFEEMLAIQAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 242
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 243 LDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE 302
Query: 310 VVPMDQQPELLQKLSEGNFTLRIMF 334
+ +++ EL++KL G FT+R M+
Sbjct: 303 LK-LEENEELIEKLKHGEFTIRDMY 326
>gi|82705448|ref|XP_726974.1| signal recognition particle protein SRP54 [Plasmodium yoelii yoelii
17XNL]
gi|23482603|gb|EAA18539.1| signal recognition particle protein SRP54 [Plasmodium yoelii
yoelii]
Length = 500
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/334 (57%), Positives = 262/334 (78%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ V+ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTSALQKIQAAPVADDNVIEECLKEIVRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG+ +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGERNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV TF
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNTFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ DLIIVD+SGRHKQE LFEEM+QV + P+ ++FV+DS IGQ+ DQA AFK SV
Sbjct: 181 KDKYDLIIVDSSGRHKQENDLFEEMKQVENSIKPEEIVFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG++I+TK+DGHAKGGGALSAV+A P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 KVGSIIITKIDGHAKGGGALSAVSAIGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G + + EV+ +++QP+L+ ++++G F LR M+
Sbjct: 301 DGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMY 334
>gi|428673047|gb|EKX73960.1| signal recognition particle 54kDa protein 2, putative [Babesia
equi]
Length = 496
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 259/334 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSTQITQAFRKLHATTVISEAVIEEVIGDIVRALLLADVNVKLVHKLRENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+P+VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKIVVDELVSMLTTEKKPFEPKKGRPNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI F+GSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFFGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+IIVDTSGRHKQE ALFEEM+ + +A PD VIFVMDS IGQA +DQA AF ++V
Sbjct: 181 AEKYDMIIVDTSGRHKQEDALFEEMKLIHDAVQPDEVIFVMDSHIGQACYDQAAAFNKAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH D+FE F+ K F+SRLLG GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHFDDFEQFEAKSFISRLLGFGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G ++ + +V+ +D++P+L+++L FT+R M+
Sbjct: 301 NGLVNTLKDVMNLDEKPDLMERLVNAKFTIRDMY 334
>gi|68072789|ref|XP_678308.1| signal recognition particle 54 kDa protein [Plasmodium berghei
strain ANKA]
gi|56498733|emb|CAH96838.1| signal recognition particle 54 kDa protein, putative [Plasmodium
berghei]
Length = 500
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/334 (56%), Positives = 260/334 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ ++ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTNALQKIQAAPVADDNIIEECLKEIIRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGDRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ DLIIVD+SGRHKQE LFEEM+QV + P+ ++FV+DS IGQ+ DQA AFK SV
Sbjct: 181 KDKYDLIIVDSSGRHKQENDLFEEMKQVESSIKPEEIVFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG++I+TK+DGHAKGGGALSAV+A P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 KVGSIIITKIDGHAKGGGALSAVSAIGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G + + EV+ +++QP+L+ ++++G F LR M+
Sbjct: 301 DGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMY 334
>gi|71033463|ref|XP_766373.1| signal recognition particle 54 kDa protein [Theileria parva strain
Muguga]
gi|68353330|gb|EAN34090.1| signal recognition particle 54 kDa protein, putative [Theileria
parva]
Length = 495
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 190/334 (56%), Positives = 259/334 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSNQITKAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+ +VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKIVVDELVNMLTTEKKPFEPKKGRCNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E D+IIVDTSGRHKQE ALF+EM+ + +A PD V+FVMDS IGQA +DQA AF ++V
Sbjct: 181 EEKYDMIIVDTSGRHKQEDALFDEMKLIYDAVQPDEVVFVMDSHIGQACYDQAAAFNKAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE FD K F+SRLLG GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFDPKSFISRLLGFGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G ++ + +V+ +D +P+LL +++ FT+R M+
Sbjct: 301 NGLINTLKDVINLDDKPDLLDRIASAKFTIRDMY 334
>gi|403221209|dbj|BAM39342.1| signal recognition particle protein 2 [Theileria orientalis strain
Shintoku]
Length = 495
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 256/334 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ NIK+
Sbjct: 1 MVLAELSTQITQAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENIKRQN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K + P KGKP+VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKVVVDELVAMLTTEKKPYVPVKGKPNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+IIVDTSGRHKQE ALF+EMR + EA PD V+FVMDS IGQA +DQA AF +V
Sbjct: 181 AEKYDMIIVDTSGRHKQEEALFDEMRLIHEAVQPDEVVFVMDSHIGQACYDQASAFNSAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE F+ K F+SRLLG GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFEPKSFISRLLGFGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G ++ + +V+ ++ +P+LL +L+ FT+R M+
Sbjct: 301 NGLINTLKDVINLEDKPDLLDRLASAKFTIRDMY 334
>gi|156100321|ref|XP_001615888.1| signal recognition particle 54 kDa protein [Plasmodium vivax Sal-1]
gi|148804762|gb|EDL46161.1| signal recognition particle 54 kDa protein, putative [Plasmodium
vivax]
Length = 500
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/334 (56%), Positives = 261/334 (78%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTCALQKLQASAVADDSAIEECLKEVMRALILADINISYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVD+SGRHKQE+ LFEEM+QV + P+ ++FV+DS IGQ+ DQA AFK SV
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQVESSIRPEEIVFVIDSHIGQSCHDQAMAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++G++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 241 TLGSIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFENFEAKSFVSRLLGLGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G + + EV+ +++QP+L+ +LS+G F LR M+
Sbjct: 301 NGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMY 334
>gi|386697251|gb|AFJ22086.1| signal recognition particle protein 54k, partial [Neottialges
vitzthumi]
Length = 433
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/307 (62%), Positives = 248/307 (80%), Gaps = 1/307 (0%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG+K ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKGFKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 267
+ A P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+DGHAKGGGALSAVAA
Sbjct: 181 IQAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDGHAKGGGALSAVAAXN 240
Query: 268 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 241 SPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHGE 299
Query: 328 FTLRIMF 334
FT+R M+
Sbjct: 300 FTIRDMY 306
>gi|328874643|gb|EGG23008.1| signal recognition particle 54 kDa subunit [Dictyostelium
fasciculatum]
Length = 502
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/333 (59%), Positives = 259/333 (77%), Gaps = 2/333 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA G IS A+ MSN+TII+E+ +N L E+ AL +ADV L+ +M+ NI+ +
Sbjct: 1 MVLADWGNQISSALAAMSNSTIINEETINHLLKEVGNALSRADVSMSLIIKMRKNIQAQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKRRII++ +F+EL K+LDPG + P KGK ++IMFVGLQG+GKTT+ TK
Sbjct: 61 KLDQMAAGLNKRRIIRKVVFDELIKLLDPGVTPWKPTKGKSNIIMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+++++KGW A+VCADTFRAGAF QL+ NATKAKIPFYGS +E DPV A +GVE F+
Sbjct: 121 LAHFYKRKGWNTAMVCADTFRAGAFAQLQHNATKAKIPFYGSESEKDPVAAAKKGVEIFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE+ LF+EM ++ PD VIFVMDSSIGQAA+DQA AFK SV
Sbjct: 181 KEGAEIIIVDTSGRHKQESELFKEMSEIETVIQPDNVIFVMDSSIGQAAYDQAMAFKTSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TKMDG++KGGGA+SAVAAT+SP+IFIG+GEH+ + E+F+ FVS+LLG+GD
Sbjct: 241 KVGSVIITKMDGNSKGGGAISAVAATQSPIIFIGSGEHIPDLEIFNPTSFVSKLLGLGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
+G ++ I +VVP D P +++SEGNFT R M
Sbjct: 301 NGMVEMIQDVVPPD--PNAWKEMSEGNFTFRNM 331
>gi|84998408|ref|XP_953925.1| signal recognition particle 54kDa protein 2 [Theileria annulata]
gi|65304923|emb|CAI73248.1| signal recognition particle 54kDa protein 2, putative [Theileria
annulata]
Length = 495
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/334 (56%), Positives = 259/334 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSNQITQAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+ +VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNSDMIGANKRRYLQKIVVDELVNMLTTEKKPFEPKKGRCNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E D+IIVDTSGRHKQE ALF+EM+ + +A PD V+FVMDS IGQA +DQA AF ++V
Sbjct: 181 EEKYDMIIVDTSGRHKQEDALFDEMKLIYDAVQPDEVVFVMDSHIGQACYDQASAFNKAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE FD K F+SRLLG GD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFDPKSFISRLLGFGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G ++ + +V+ ++ +P+LL +++ FT+R M+
Sbjct: 301 NGLINTLKDVINLEDKPDLLDRIASAKFTIRDMY 334
>gi|194373485|dbj|BAG56838.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/296 (65%), Positives = 244/296 (82%), Gaps = 1/296 (0%)
Query: 39 LLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK 98
++ ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG ++TP K
Sbjct: 1 MVLADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTK 60
Query: 99 GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIP 158
GK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IP
Sbjct: 61 GKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIP 120
Query: 159 FYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVI 218
FYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD ++
Sbjct: 121 FYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIV 180
Query: 219 FVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH 278
+VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH
Sbjct: 181 YVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEH 240
Query: 279 MDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+D+FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 241 IDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 295
>gi|358342721|dbj|GAA50175.1| signal recognition particle subunit SRP54 [Clonorchis sinensis]
Length = 518
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/334 (60%), Positives = 266/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL+++DV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITSALRSLGNATIINEDVLNGLLKEICTALIESDVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F +L ++DP ++ P KG +VIM VGLQGSGKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFEQLVHLIDPQVKAWQPTKGTSNVIMLVGLQGSGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+K WK ++CADT+RAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F+
Sbjct: 121 LAYYYQRKNWKTCMICADTYRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A PD VI+VMD+SIGQA QA AFK V
Sbjct: 181 DESFEIIIVDTSGRHKQEDSLFEEMLQVSNAIEPDQVIYVMDASIGQACEAQASAFKSKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT SP++FIGTGEH+D+FE F VKPFV +LLG+GD
Sbjct: 241 DVSSVIVTKLDGHAKGGGALSAVAATHSPIVFIGTGEHIDDFEPFRVKPFVQKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G ++++ E + +D+ EL++KL +G FTLR M+
Sbjct: 301 EGLVERVTE-LKLDENEELVKKLKQGVFTLRNMY 333
>gi|213408098|ref|XP_002174820.1| signal recognition particle protein [Schizosaccharomyces japonicus
yFS275]
gi|212002867|gb|EEB08527.1| signal recognition particle protein [Schizosaccharomyces japonicus
yFS275]
Length = 537
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 262/331 (79%), Gaps = 1/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV + LG ++ A+ ++S + +++++V++ L I +ALL++DV +LV+E++ NIKK +
Sbjct: 1 MVFSDLGRRLNAALGELSKSDVVNDEVVDGVLKSICKALLESDVNVRLVQELRGNIKKRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L AG N +R++Q+A+F+ELC +LDP +FTPKKG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 NVKSLPAGPNGKRVVQKAVFDELCDLLDPKTQAFTPKKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q++G+K LV ADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV +A GV+ FK
Sbjct: 121 LALYYQRRGFKSCLVAADTFRAGAFDQLKQNALKARIPFYGSYTEADPVVVAQTGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM ++SEA P+ I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KERFDIIIVDTSGRHQQEKELFNEMIEISEAVRPNQTIMVLDASIGQAAESQSRAFKESA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ GAVIVTK+DGHAKGGGALSAVAATK+P+IFIGTGEH+++ E F + F+S+LLGMGD
Sbjct: 241 NFGAVIVTKLDGHAKGGGALSAVAATKTPIIFIGTGEHINDLERFSPRSFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +D+Q +++ L +G FT+R
Sbjct: 301 EGLLEHVQS-LGLDKQQNMVKNLEQGKFTVR 330
>gi|330802872|ref|XP_003289436.1| signal recognition particle 54 kDa subunit [Dictyostelium
purpureum]
gi|325080478|gb|EGC34032.1| signal recognition particle 54 kDa subunit [Dictyostelium
purpureum]
Length = 516
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/333 (57%), Positives = 259/333 (77%), Gaps = 2/333 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG +S A++ ++ +TI++E +N L EI AL ++DV L+ +M+ NIK+ V
Sbjct: 1 MVLAELGNQLSAALRNLNESTIVNEDTINTLLKEIGNALSKSDVSMSLIIQMRKNIKEKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKR+II++ +F EL +++DPG P + P KGK +V+MFVGLQG+GKTT+ TK
Sbjct: 61 KLDQIAAGLNKRKIIRKVVFEELIRLVDPGVPLWKPVKGKSNVVMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY++KKGW A+VCADTFRAGAFDQ++ NA K KI +YGS TE DPV +A GV+ FK
Sbjct: 121 LAYYYKKKGWSTAIVCADTFRAGAFDQVRHNAAKGKIQYYGSDTEKDPVVVAKAGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQ++ LFEEM+Q+ A PD VIFVMDSSIGQAA++QA AFK SV
Sbjct: 181 KEGTEIIIVDTSGRHKQDSELFEEMKQIETAVKPDNVIFVMDSSIGQAAYEQATAFKNSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG++I+TKMDG++KGGGALS +AAT SP+IFIGTGEH+ + ++FD + FV++LLG GD
Sbjct: 241 KVGSIIITKMDGNSKGGGALSGIAATGSPIIFIGTGEHLTDLDLFDPETFVNKLLGNGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G ++KI EV+P D L+++++G FTLR M
Sbjct: 301 KGMLEKIKEVIPEDSSS--LKEIAQGKFTLRSM 331
>gi|257205636|emb|CAX82469.1| Signal recognition particle 54 kDa protein [Schistosoma japonicum]
Length = 532
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/334 (59%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH+QE +LFEEM QVS A PD VI+V+D+SIGQA QA AFK V
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNAIEPDHVIYVLDASIGQACEAQASAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 241 DVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G ++++ E + +D+ EL++KL +G FTLR M+
Sbjct: 301 EGLVERVTE-LKLDENEELVKKLKQGVFTLRNMY 333
>gi|328772629|gb|EGF82667.1| hypothetical protein BATDEDRAFT_86146 [Batrachochytrium
dendrobatidis JAM81]
Length = 565
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/348 (56%), Positives = 270/348 (77%), Gaps = 17/348 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ ++ AT+IDE+ L L EI ALL++DV +LV+ ++ NIK IV
Sbjct: 1 MVLAELGKRINTALKTLTTATVIDEEALEAILKEICGALLESDVNVRLVQSLRKNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKP--SFTPKKGKPSVIMFVGLQGSGKTTTC 118
NL +L++G NK+RIIQ+AIF+ELCK++DPG+ +F P+KGKP+VIMFVGLQGSGKTTTC
Sbjct: 61 NLQELSSGINKKRIIQKAIFDELCKLVDPGQGVVAFKPRKGKPNVIMFVGLQGSGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
TK AYY+Q+KG++ LVC DTFRAGAFDQLKQNATKAKIP+YGSYTESDPV++A+EGV+
Sbjct: 121 TKMAYYYQRKGYRTCLVCTDTFRAGAFDQLKQNATKAKIPYYGSYTESDPVQLAMEGVDK 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FK E ++IIVDTSGRH+QE LF+EM+Q+S PD V+FV+D +IGQAA A+AF++
Sbjct: 181 FKVEGFEVIIVDTSGRHRQETELFQEMQQISNVIKPDNVVFVLDGTIGQAADAHARAFQE 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG-- 296
+V +G++++TKMDGHAKGGGA+SAVAAT SP++FIGTGEH+ + E+F + FV ++LG
Sbjct: 241 TVDIGSIVITKMDGHAKGGGAISAVAATGSPILFIGTGEHIHDLEIFKSQSFVRKMLGSQ 300
Query: 297 -----------MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
MGD G M+ + ++ + +L++ + +G FTLR M
Sbjct: 301 LLAIDIASKKSMGDIDGLMETVQDMKL--ENTDLMKNIEQGKFTLRSM 346
>gi|71755401|ref|XP_828615.1| signal recognition particle 54 kDa [Trypanosoma brucei TREU927]
gi|70834001|gb|EAN79503.1| signal recognition particle 54 kDa [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261334497|emb|CBH17491.1| signal recognition particle 54 kDa, putative [Trypanosoma brucei
gambiense DAL972]
Length = 487
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/334 (59%), Positives = 252/334 (75%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LNE+ RALLQADV K V+E+Q N++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNEVARALLQADVNVKTVKELQQNVRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + KMLDPG F P KGK S++MFVGLQGSGKTT+CTK
Sbjct: 61 AITAEAAGLNKRKMLQTAVFNGIKKMLDPGVKPFIPAKGKTSIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K LVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGLKTGLVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVIIAKEGVLELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV +A P+ ++FVM ++ GQ +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVQQAVKPNDIVFVMSATDGQGIEEQARQFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F + FVSR+LGMGD
Sbjct: 241 PIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPESFVSRMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+D + + +D EL ++ +G FTLR M+
Sbjct: 301 RALVDSMKD-ANIDTDSELYKRFQDGQFTLRDMY 333
>gi|399218124|emb|CCF75011.1| unnamed protein product [Babesia microti strain RI]
Length = 494
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/334 (57%), Positives = 262/334 (78%), Gaps = 2/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++++ AT+ID +++E + +I R+LL ADV K VR++Q N+KK +
Sbjct: 1 MVLAELGSQINGALRKLYCATVIDNTIIDEVIKDIVRSLLMADVNVKYVRQLQDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G N+R++IQ+ IF+E+ ++ ++ PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 YQGNEIVGANRRKLIQKTIFSEIVNLMTAKNEAYVPKKGKRNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y +Y+Q+KG L+CADTFRAGAFDQLKQNATKAKIPFYGSYTE++PV++A +GV+ FK
Sbjct: 121 YGHYYQRKGM-TGLICADTFRAGAFDQLKQNATKAKIPFYGSYTEANPVKVARDGVDKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E DLIIVDTSGRHKQ+ +L EEM+Q++ A PD ++FV+DS IGQA +DQA AF ++V
Sbjct: 180 SEKYDLIIVDTSGRHKQQESLLEEMKQIATA-EPDDIVFVLDSHIGQACYDQALAFCKAV 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VI+TK+DGHAKGGGA+SAV+AT SP+IFIGTGEH D+FE FD + FVSRLLG GD
Sbjct: 239 NVGSVIITKLDGHAKGGGAISAVSATNSPIIFIGTGEHFDDFEPFDPQSFVSRLLGFGDI 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G ++ EVV + E ++++S+G F+LR M+
Sbjct: 299 NGLINTFKEVVENNGNNESIERISKGKFSLRDMY 332
>gi|256082003|ref|XP_002577253.1| signal recognition particle 54 kD protein [Schistosoma mansoni]
gi|353233394|emb|CCD80749.1| putative signal recognition particle 54 kD protein [Schistosoma
mansoni]
Length = 538
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/334 (59%), Positives = 264/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G +VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSSNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH+QE +LFEEM QVS A PD VI+V+D+SIGQA QA AFK V
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNAIEPDHVIYVLDASIGQACEAQASAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 241 DVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G ++++ E + +D+ EL++KL +G FTLR M+
Sbjct: 301 EGLVERVTE-LKLDENEELVKKLKQGVFTLRNMY 333
>gi|257216394|emb|CAX82402.1| Signal recognition particle 54 kDa protein [Schistosoma japonicum]
Length = 461
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/334 (59%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E ++IIVDTSGRH+QE +LFEEM QVS A PD VI+V+D+SIGQA QA AFK V
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNAIEPDHVIYVLDASIGQACEAQASAFKAKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 241 DVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G ++++ E + +D+ EL++KL +G FTLR M+
Sbjct: 301 EGLVERVTE-LKLDENEELVKKLKQGVFTLRNMY 333
>gi|23295846|gb|AAN12396.1| signal recognition particle 54 kDa [Trypanosoma brucei]
Length = 487
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/334 (58%), Positives = 251/334 (75%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E NE+ RALLQADV K V+E+Q N++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFXNEVARALLQADVNVKTVKELQQNVRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + KMLDPG F P KGK S++MFVGLQGSGKTT+CTK
Sbjct: 61 AITAEAAGLNKRKMLQTAVFNGIKKMLDPGVKPFIPAKGKTSIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K LVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGLKTGLVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVIIAKEGVLELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV +A P+ ++FVM ++ GQ +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVQQAVKPNDIVFVMSATDGQGIEEQARQFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F + FVSR+LGMGD
Sbjct: 241 PIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPESFVSRMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+D + + +D EL ++ +G FTLR M+
Sbjct: 301 RALVDSMKD-ANIDTDSELYKRFQDGQFTLRDMY 333
>gi|342185665|emb|CCC95150.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 509
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/334 (58%), Positives = 252/334 (75%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LNE+ RALLQADV K+V+E+Q N++ V
Sbjct: 23 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNEVARALLQADVNIKIVKELQNNVRAEV 82
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 83 AITAEAAGLNKRKMLQAAVFNGIKKILDPGVKPFVPAKGKTNIVMFVGLQGSGKTTSCTK 142
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K LVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV K
Sbjct: 143 YAAYFQRKGFKTGLVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVLIAKEGVMELK 202
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLII+DTSGRHKQE+ALFEEM++V EA P+ ++FVM ++ GQ DQA+ FK+ V
Sbjct: 203 KEKYDLIIIDTSGRHKQESALFEEMKEVQEAVKPNDIVFVMSATDGQGVEDQARQFKEKV 262
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F FV R+LGMGD
Sbjct: 263 PIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPDRFVGRMLGMGDM 322
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+D + + +D L ++L EG FT+R M+
Sbjct: 323 QSLVDSMKD-ANIDTDSVLYKRLQEGQFTMRDMY 355
>gi|323454201|gb|EGB10071.1| hypothetical protein AURANDRAFT_36724 [Aureococcus anophagefferens]
Length = 497
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 260/334 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+ +M + T+I E+VL++ L +I ALL+ADV ++V E++ IK
Sbjct: 1 MVLQELGSKLTAALHKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVMELRKAIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++ +AG N+R++IQ+A+ EL MLDPG + KKG P+VIMFVGLQG+GKTTT K
Sbjct: 61 NLEEESAGTNRRKMIQKAVVEELAGMLDPGVKAHEMKKGSPNVIMFVGLQGAGKTTTIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A ++ +KG+K +VCADTFRAGA+DQL+QNATK + PFYGSYTE+DPVRIA EGV+ FK
Sbjct: 121 FANHYLRKGFKCCMVCADTFRAGAYDQLRQNATKLRCPFYGSYTEADPVRIAQEGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++IIVDTSGRHKQE ALFEEM+++ A P VIFV+D++ GQA +QA +F +++
Sbjct: 181 AEKYEVIIVDTSGRHKQETALFEEMQEIRAAIEPQNVIFVLDATQGQAVHEQASSFHEAI 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G+V++TK+DGHAKGGGALSAVAAT +P++F+G+GEH D+FE F+ FVSRLLGMGD
Sbjct: 241 DIGSVVITKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFNAHSFVSRLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +++I + + D+QPEL++K S+G FTLR M+
Sbjct: 301 RGLVEQIKDTIGDDKQPELMEKFSKGQFTLRDMY 334
>gi|326920725|ref|XP_003206619.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Meleagris gallopavo]
Length = 474
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/334 (59%), Positives = 249/334 (74%), Gaps = 31/334 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENL---- 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 57 --------------------------VDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 90
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 91 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 150
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AFK V
Sbjct: 151 NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV 210
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 211 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 270
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +DK++E + +D L++KL G FTLR M+
Sbjct: 271 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 303
>gi|294948604|ref|XP_002785803.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239899911|gb|EER17599.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 506
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/340 (58%), Positives = 257/340 (75%), Gaps = 6/340 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATII----DEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVL L ++ A++ + A D++ L ECL EI +ALLQADV K V +++ +I
Sbjct: 1 MVLNDLSSQLTSALRSLQKAASSLNEEDDEPLEECLKEIAKALLQADVNVKYVSKLRQSI 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ + L + AA N+ + +++ +F+EL K+L P + T KG+ +V+MFVGLQGSGKTT
Sbjct: 61 RTQMKLYEGAA-INRHKTVRKLVFDELVKLLTPSRAPRTLTKGRSNVVMFVGLQGSGKTT 119
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTKYA Y+Q++GWK ALVCADTFRAGAFDQL+QNATKA IPFYGS+T +DPV++A EGV
Sbjct: 120 SCTKYALYYQRRGWKVALVCADTFRAGAFDQLRQNATKALIPFYGSHTITDPVQVASEGV 179
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK+E DLIIVDTSGRHKQE ALF+EM+QVSEA PD VIFVMDS IGQA QA AF
Sbjct: 180 ELFKEERYDLIIVDTSGRHKQELALFDEMKQVSEAVKPDDVIFVMDSHIGQACSAQAAAF 239
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+V VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F+VK FV RLLG
Sbjct: 240 SNAVDVGSVIITKLDGHAKGGGALSAVAATDSPIIFIGTGEHLDDFERFEVKGFVGRLLG 299
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGN-FTLRIMFS 335
+GD +G D I V +D+Q + +++L G FTLR ++S
Sbjct: 300 IGDLAGLADSIANAVDIDEQKKTMERLQAGKAFTLRDLYS 339
>gi|407425446|gb|EKF39427.1| signal recognition particle, putative [Trypanosoma cruzi
marinkellei]
Length = 484
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/334 (58%), Positives = 252/334 (75%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 1 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L ++LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFSGLKRILDPGIKPFIPAKGKTNIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 121 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVTELE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQ +QAQ FK+ V
Sbjct: 181 KEKYDLIIIDTSGRHKQESALFEEMKQVQEAVKPNDIVFVMSATDGQGIREQAQQFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 241 PVGSVIITKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MD + + +D EL ++L +G FT+R M+
Sbjct: 301 RALMDTMKD-AKIDTDSELYKRLQDGLFTMRDMY 333
>gi|146087779|ref|XP_001465902.1| putative signal recognition particle [Leishmania infantum JPCM5]
gi|398015951|ref|XP_003861164.1| signal recognition particle, putative [Leishmania donovani]
gi|134070003|emb|CAM68333.1| putative signal recognition particle [Leishmania infantum JPCM5]
gi|322499389|emb|CBZ34462.1| signal recognition particle, putative [Leishmania donovani]
Length = 519
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/334 (58%), Positives = 258/334 (77%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIKTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KGK +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFIPVKGKQNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAVYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQA +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEAVKPNDIVFVMSATDGQAVEEQARNFKEMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 241 AVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G MD + + +D E+ ++L +G FT+R M+
Sbjct: 301 GGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMY 333
>gi|401422796|ref|XP_003875885.1| putative signal recognition particle [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492125|emb|CBZ27399.1| putative signal recognition particle [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 519
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/334 (58%), Positives = 258/334 (77%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIKTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KGK +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFIPVKGKQNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKAALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQA +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEAVKPNDIVFVMSATDGQAVEEQARNFKEMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 241 AVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G MD + + +D E+ ++L +G FT+R M+
Sbjct: 301 GGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMY 333
>gi|66819967|ref|XP_643640.1| signal recognition particle 54 kDa subunit [Dictyostelium
discoideum AX4]
gi|75009097|sp|Q75K18.1|SRP54_DICDI RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|60471522|gb|EAL69478.1| signal recognition particle 54 kDa subunit [Dictyostelium
discoideum AX4]
Length = 542
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/331 (56%), Positives = 256/331 (77%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG +S A++ ++ TI++E +N+ L E+ AL ++DV L+ +M+ NIK +
Sbjct: 1 MVLADLGNQLSSALRSLNETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKR+II+Q +F+EL ++LDPG P + P KGK +++MFVGLQG+GKTT+ TK
Sbjct: 61 KLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY+++KKG+ A+VCADTFRAGAFDQ++ NA KAKI +YGS TE DPV +A GV+ FK
Sbjct: 121 LAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ ++IIVDTSGRHKQ++ LFEEM+Q+ A PD IFVMDSSIGQAA++QA AF+ SV
Sbjct: 181 KDGTEIIIVDTSGRHKQDSELFEEMKQIETAVKPDNCIFVMDSSIGQAAYEQATAFRSSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG++I+TKMDG++ GGGA+SAVAAT +P+IFIGTGEH+ + E+FD FVS+LLG GD
Sbjct: 241 KVGSIIITKMDGNSMGGGAISAVAATNTPIIFIGTGEHLTDLELFDPSTFVSKLLGYGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++KI EV+P D L+++++G FTLR
Sbjct: 301 KGMLEKIKEVIPEDSTS--LKEIAQGKFTLR 329
>gi|71651473|ref|XP_814414.1| signal recognition particle [Trypanosoma cruzi strain CL Brener]
gi|70879383|gb|EAN92563.1| signal recognition particle, putative [Trypanosoma cruzi]
Length = 487
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/334 (58%), Positives = 251/334 (75%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 1 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFSGLRKILDPGVKPFIPAKGKTNIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 121 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVAELE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQ +QA+ FK+ V
Sbjct: 181 KEKYDLIIIDTSGRHKQESALFEEMKQVQEAVKPNDIVFVMSATDGQGIREQARQFKEKV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 241 PVGSVIITKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MD + + +D EL ++ +G FT+R M+
Sbjct: 301 RALMDTMKD-ANIDTDSELYRRFQDGQFTMRDMY 333
>gi|24473790|gb|AAL55410.1| SRP54-like protein [Leishmania major]
Length = 487
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/334 (58%), Positives = 258/334 (77%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +I+ +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIRTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KG+ +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFLPVKGRHNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQA +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEAVKPNDIVFVMSATDGQAVEEQARNFKEMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 241 AVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G MD + + +D E+ ++L +G FT+R M+
Sbjct: 301 GGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMY 333
>gi|349605055|gb|AEQ00420.1| Signal recognition particle 54 kDa protein-like protein, partial
[Equus caballus]
Length = 454
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/284 (65%), Positives = 235/284 (82%), Gaps = 1/284 (0%)
Query: 51 EMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ 110
+++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQ
Sbjct: 1 QLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQ 60
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV
Sbjct: 61 GSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVI 120
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA
Sbjct: 121 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACE 180
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF
Sbjct: 181 AQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPF 240
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+S+LLGMGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 241 ISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 283
>gi|157870075|ref|XP_001683588.1| putative signal recognition particle [Leishmania major strain
Friedlin]
gi|68126654|emb|CAJ04436.1| putative signal recognition particle [Leishmania major strain
Friedlin]
Length = 519
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/334 (58%), Positives = 258/334 (77%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +I+ +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIRTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KG+ +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFLPVKGRHNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQA +QA+ FK+ V
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEAVKPNDIVFVMSATDGQAVEEQARNFKEMV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 241 AVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G MD + + +D E+ ++L +G FT+R M+
Sbjct: 301 GGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMY 333
>gi|325180969|emb|CCA15378.1| signal recognition particle putative [Albugo laibachii Nc14]
Length = 509
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/334 (56%), Positives = 256/334 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL QLG + A+ ++ TI+D++VLN + ++ ALL++DVQ +LVR+++ N++ V
Sbjct: 1 MVLEQLGSKLQSALAALNTTTIVDDEVLNNIMKDVCAALLESDVQVQLVRQIRDNVRLTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG N+RR+IQ+A+ ++L ++L K F KKG + +MFVGLQGSGKTT+ K
Sbjct: 61 AAHESAAGVNRRRLIQKAVLDQLIQILQSKKKPFKLKKGSCNTVMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+Q+KGWK +VCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPVRIA +GV F+
Sbjct: 121 YAHYYQRKGWKTCMVCADTFRAGAFDQLKQNATKLRIPFYGSYTEADPVRIAEQGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ +LI+VDTSGRHKQE LF EM+QV+ A PD V+FVMDS+IGQA +DQ+ AF QSV
Sbjct: 181 ADHYELILVDTSGRHKQETDLFAEMKQVAAAVRPDDVVFVMDSTIGQAVYDQSSAFVQSV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH E E FD + FVSR++GMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFSELETFDAQRFVSRMMGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G M+++ + D + EL+ K +G++TLR ++
Sbjct: 301 RGLMEEVKQSGIFDDEKELMSKFQKGSYTLRDLY 334
>gi|407860349|gb|EKG07361.1| signal recognition particle, putative [Trypanosoma cruzi]
Length = 578
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/334 (58%), Positives = 251/334 (75%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 92 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 151
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 152 AITSEAVGLNKRKMLQSAVFSGLKKILDPGVKPFIPAKGKNNIVMFVGLQGSGKTTSCTK 211
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 212 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVAELE 271
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA P+ ++FVM ++ GQ +QA+ FK+ V
Sbjct: 272 KEKYDLIIIDTSGRHKQESALFEEMKQVQEAVKPNDIVFVMSATDGQGIREQARQFKEKV 331
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VIVTK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 332 PVGSVIVTKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGDM 391
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MD + + +D EL ++ +G FT+R M+
Sbjct: 392 RALMDTMKD-ANIDTDSELYRRFQDGQFTMRDMY 424
>gi|340058713|emb|CCC53073.1| putative signal recognition particle [Trypanosoma vivax Y486]
Length = 487
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/334 (58%), Positives = 251/334 (75%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LN++ ALLQADV K V+E+Q ++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNDVGCALLQADVNVKTVKELQKSVLSEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+FN + KMLDPG FTP KGK SV+MFVGLQG+GKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFNGIKKMLDPGVKPFTPVKGKTSVVMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y+Q+KG+K LVCADTFRAGA+DQL+QNATKAKI FYGS TE+DP IA EGV K
Sbjct: 121 YAAYYQRKGFKTGLVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPAIIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E +LIIVDTSGRHKQE+ALFEEM+QV +A P+ V+FVM ++ GQ +QA+ FK+ V
Sbjct: 181 REKYELIIVDTSGRHKQESALFEEMKQVQDAVQPNDVVFVMSATDGQGIEEQARQFKEHV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VIVTK+DG AKGGGAL+AV +TKSP++FIGTGEH DEFE+F + FVSRLLGMGD
Sbjct: 241 PVGSVIVTKLDGQAKGGGALAAVVSTKSPIVFIGTGEHFDEFELFQPESFVSRLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+D + + +D EL ++ EG FT+R M+
Sbjct: 301 RALVDTMKD-ANIDTDSELYKRFQEGQFTMRDMY 333
>gi|156086872|ref|XP_001610843.1| signal recognition particle SRP54 protein [Babesia bovis T2Bo]
gi|154798096|gb|EDO07275.1| signal recognition particle SRP54 protein, putative [Babesia bovis]
Length = 499
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/334 (60%), Positives = 258/334 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ TII E+V++E + +I RALL ADV KLVR+++ N+K V
Sbjct: 1 MVLAELSEQITQAFRKLHARTIITEEVIDEVIGDIVRALLSADVNVKLVRQLRENVKLQV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L A G NKR+ IQ+A+ E ML + + PKKG ++IMFVGLQG+GKTTTCTK
Sbjct: 61 RLHADALGANKRKFIQKAVIEEFINMLSSDRKPYVPKKGHANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++QKKGW+ AL+CADTFRAGAFDQLKQNA K KIPF+GSY+E++ VR+A EGV FK
Sbjct: 121 FAYHYQKKGWRTALICADTFRAGAFDQLKQNAAKVKIPFFGSYSEANAVRVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E D+IIVDTSGRHKQE +LFEEMR + EA PD VIFVMDS IGQA +DQA AF + V
Sbjct: 181 EEKYDIIIVDTSGRHKQEESLFEEMRLIHEAVKPDDVIFVMDSHIGQACYDQAAAFNKVV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGHAKGGGAL+AVAAT SP+IFIGTGEH D FE FD K FVSR+LGMGD
Sbjct: 241 DVGSVIITKLDGHAKGGGALAAVAATNSPIIFIGTGEHFDNFEKFDAKSFVSRMLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G ++ I E+V M+ E++ ++S G +TLR M+
Sbjct: 301 NGLINTIQEIVGMNTNKEMVDRISSGIYTLRDMY 334
>gi|358060767|dbj|GAA93538.1| hypothetical protein E5Q_00182 [Mixia osmundae IAM 14324]
Length = 523
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/336 (57%), Positives = 256/336 (76%), Gaps = 6/336 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ Q+S A++IDE+VL+ L EI AL +ADV KLV ++ +K V
Sbjct: 1 MVLADLGKRINGALSQLSAASVIDEQVLDSILKEIATALFEADVNVKLVANLRNKVKTKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS---FTPKKGKPSVIMFVGLQGSGKTTT 117
L + NK+ +IQ+A+F+EL +++DPG + FTPKKG+ +VIMFVGLQG+GKTT+
Sbjct: 61 -APALGSSGNKKSVIQRAVFDELVQLVDPGPEAAAPFTPKKGQSNVIMFVGLQGAGKTTS 119
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A +++++G+K LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV I+ +GV
Sbjct: 120 CTKLAIHYKRRGYKTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVVISAQGVH 179
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
F++E D+IIVDTSGRH+QE LFEEM Q+S PD I V+D +IGQAA Q++AFK
Sbjct: 180 KFREERFDIIIVDTSGRHRQETELFEEMMQISRQVKPDQTIMVLDGAIGQAAESQSRAFK 239
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++ GA+IVTKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ + E F +PF+S++LGM
Sbjct: 240 EAADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFIGTGEHLHDLEKFSPEPFISKMLGM 299
Query: 298 GDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
GD G M+ + EV +Q+ E+L+KL G FT+R
Sbjct: 300 GDMQGLMETVQEVHQNNPNQRAEMLKKLEAGVFTVR 335
>gi|296420065|ref|XP_002839601.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635784|emb|CAZ83792.1| unnamed protein product [Tuber melanosporum]
Length = 546
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 253/331 (76%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ + ++DEKV + L EI AL++ADV KLV ++ +IK V
Sbjct: 1 MVLADLGKRITSAVSDLARSNVVDEKVFDGMLKEICSALIEADVNVKLVSNLRKSIKHTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKG+ +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFKELNPNVNKKRLIQKAVFDELVKLVDPHSEPFKPKKGRSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV+++ EGVE FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSYTETDPVKVSREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ +A PD I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KERFDIIIVDTSGRHQQEKELFAEMVQIQQAVTPDQTIMVLDASIGQAAEAQSKAFKESA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ GA+I+TK DGHA GGGA+SAVAAT++P++FIGTGEHM + E F + FVS+LLGMGD
Sbjct: 241 NFGAIIITKTDGHAAGGGAISAVAATRTPIMFIGTGEHMLDLERFAPQAFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ + EG FT+R
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHIQEGIFTVR 329
>gi|410898716|ref|XP_003962843.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Takifugu rubripes]
Length = 455
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/275 (66%), Positives = 229/275 (83%), Gaps = 1/275 (0%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+
Sbjct: 11 IDLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCS 70
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ F
Sbjct: 71 KLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKF 130
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIGQA QA+AFK
Sbjct: 131 KMENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACESQAKAFKDK 190
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 191 VDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 250
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +D++++ + +D EL+ KL G FTLR M+
Sbjct: 251 IEGLIDRVND-LKLDDNEELIDKLKHGQFTLRDMY 284
>gi|417410790|gb|JAA51861.1| Putative signal recognition particle subunit srp54, partial
[Desmodus rotundus]
Length = 448
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/278 (66%), Positives = 230/278 (82%), Gaps = 1/278 (0%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 1 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 60
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 61 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 120
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 121 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 180
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 181 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 240
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 241 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 277
>gi|226371618|ref|NP_001139754.1| signal recognition particle 54 kDa protein isoform 2 [Homo sapiens]
gi|332229143|ref|XP_003263751.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Nomascus leucogenys]
gi|335292473|ref|XP_003356739.1| PREDICTED: signal recognition particle 54 kDa protein [Sus scrofa]
gi|338717903|ref|XP_003363720.1| PREDICTED: signal recognition particle 54 kDa protein [Equus
caballus]
gi|397501117|ref|XP_003821241.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Pan paniscus]
gi|402875939|ref|XP_003901748.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Papio anubis]
gi|410048163|ref|XP_003952520.1| PREDICTED: signal recognition particle 54 kDa protein [Pan
troglodytes]
gi|194374727|dbj|BAG62478.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/278 (66%), Positives = 230/278 (82%), Gaps = 1/278 (0%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 284
>gi|344274152|ref|XP_003408882.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Loxodonta africana]
Length = 455
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/278 (66%), Positives = 230/278 (82%), Gaps = 1/278 (0%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 284
>gi|291403730|ref|XP_002718184.1| PREDICTED: signal recognition particle 54kDa isoform 2 [Oryctolagus
cuniculus]
Length = 455
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/278 (66%), Positives = 230/278 (82%), Gaps = 1/278 (0%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 284
>gi|427792757|gb|JAA61830.1| Putative signal recognition particle subunit srp54, partial
[Rhipicephalus pulchellus]
Length = 474
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/268 (70%), Positives = 223/268 (83%), Gaps = 1/268 (0%)
Query: 67 AGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQ 126
AG NKRR+IQ A+F EL +++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK AY++
Sbjct: 38 AGLNKRRMIQSAVFKELIRLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTKLAYHYL 97
Query: 127 KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDL 186
KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK E ++
Sbjct: 98 KKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFKNEGFEI 157
Query: 187 IIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 246
I+VDTSGRHKQE +LFEEM QVS AT PD +IFVMD+SIGQA QA+AFK+ V VGAVI
Sbjct: 158 IVVDTSGRHKQEDSLFEEMLQVSNATKPDNIIFVMDASIGQACESQARAFKEKVDVGAVI 217
Query: 247 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 306
VTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD G +DK
Sbjct: 218 VTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDIEGLIDK 277
Query: 307 IHEVVPMDQQPELLQKLSEGNFTLRIMF 334
++E + +D EL++KL G FTLR M+
Sbjct: 278 VNE-LKLDDNEELIEKLKHGEFTLRDMY 304
>gi|296214803|ref|XP_002753861.1| PREDICTED: signal recognition particle 54 kDa protein isoform 3
[Callithrix jacchus]
gi|345306152|ref|XP_003428427.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Ornithorhynchus anatinus]
Length = 455
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/278 (66%), Positives = 230/278 (82%), Gaps = 1/278 (0%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 284
>gi|410962047|ref|XP_003987588.1| PREDICTED: signal recognition particle 54 kDa protein isoform 3
[Felis catus]
Length = 455
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/278 (66%), Positives = 230/278 (82%), Gaps = 1/278 (0%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
+ FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA QA+AF
Sbjct: 128 DKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAF 187
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLG
Sbjct: 188 KDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLG 247
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
MGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 248 MGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 284
>gi|154338231|ref|XP_001565340.1| putative signal recognition particle [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062389|emb|CAM42250.1| putative signal recognition particle [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 566
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/334 (58%), Positives = 251/334 (75%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 45 MVLAELGQKIGQAIHRMSAKSVLSEDDVKELMNEIARALLQADVNVAIVKKLQVSIKTEL 104
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + G NKR+I+Q A+F L ++LDPG F P KGK +V++FVGLQGSGKTT+CTK
Sbjct: 105 ALAEEGVGLNKRKILQNAVFKGLQRILDPGVKPFMPVKGKQNVVLFVGLQGSGKTTSCTK 164
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 165 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAREGVAELK 224
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVDTSGRHKQEAALFEEM+QV EA P+ ++FVM ++ GQA QA FK V
Sbjct: 225 KEKYDLIIVDTSGRHKQEAALFEEMKQVEEAVKPNDIVFVMSATDGQAVEAQASHFKAMV 284
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH D+F++F + FV ++LGMGD
Sbjct: 285 PVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFDDFDLFRPERFVQKMLGMGDI 344
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G MD + + ++ E+ ++L +G FT+R M+
Sbjct: 345 GGLMDTMRD-ANINGNEEVYKRLQDGLFTMRDMY 377
>gi|392574127|gb|EIW67264.1| hypothetical protein TREMEDRAFT_72197 [Tremella mesenterica DSM
1558]
Length = 584
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/339 (56%), Positives = 258/339 (76%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q+S A ++D++VL+ L E+T ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGARLHGALSQLSRAPVVDDQVLDALLKELTAALLESDVNVKLVASLRNKVKTKV 60
Query: 61 --NLDDLAAGH----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
+L++ AA N++ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESAAAGGREVNRKNVVQKAVFDELVALVDPGVEPYKPIKGKANVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE ++IIVDTSGRHKQE+ LFEEM +S A PD+ I V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFEVIIVDTSGRHKQESELFEEMVAISNAVKPDMTIMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEHM++ E F +PFVS+L
Sbjct: 241 AFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHMNDLERFAPQPFVSKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LGMGD G M+ + ++ ++Q E+ +KL +G F+LR
Sbjct: 301 LGMGDMQGLMEHMQDMARANPERQKEMAKKLEQGKFSLR 339
>gi|363734109|ref|XP_003641340.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Gallus gallus]
Length = 455
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/284 (64%), Positives = 235/284 (82%), Gaps = 2/284 (0%)
Query: 52 MQTNIKK-IVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ 110
+Q ++K+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQ
Sbjct: 2 LQLSMKRSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQ 61
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTC+K AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV
Sbjct: 62 GSGKTTTCSKLAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVI 121
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA
Sbjct: 122 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACE 181
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF
Sbjct: 182 AQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPF 241
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+S+LLGMGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 242 ISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 284
>gi|294889453|ref|XP_002772820.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239877370|gb|EER04636.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 508
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/342 (57%), Positives = 255/342 (74%), Gaps = 8/342 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATII----DEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVL L ++ A++ + A D++ L ECL EI +ALLQADV K V +++ +I
Sbjct: 1 MVLNDLSSQLTSALRSLQKAASSLNEEDDEPLEECLKEIAKALLQADVNVKYVSKLRQSI 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ + L + AA N+ + +++ +F+EL K+L P + T KG+ +V+MFVGLQGSGKTT
Sbjct: 61 RTQMKLYEGAA-INRHKTVRKLVFDELVKLLTPSRAPRTLTKGRSNVVMFVGLQGSGKTT 119
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTKYA Y+Q++GWK ALVCADTFRAGAFDQL+QNATKA IPFYGS+T +DPV++A EGV
Sbjct: 120 SCTKYALYYQRRGWKVALVCADTFRAGAFDQLRQNATKALIPFYGSHTITDPVQVASEGV 179
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSE--ATNPDLVIFVMDSSIGQAAFDQAQ 234
E FK+E DLIIVDTSGRHKQE ALF+EM+QV + + D VIFVMDS IGQA QA
Sbjct: 180 ELFKEERYDLIIVDTSGRHKQELALFDEMKQVRQWGSGEADDVIFVMDSHIGQACSAQAA 239
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AF +V VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F+VK FV RL
Sbjct: 240 AFSNAVDVGSVIITKLDGHAKGGGALSAVAATDSPIIFIGTGEHLDDFERFEVKGFVGRL 299
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN-FTLRIMFS 335
LGMGD +G D I V +D+Q + +++L G FTLR ++S
Sbjct: 300 LGMGDLAGLADSIANAVDIDEQKKTMERLQAGKAFTLRDLYS 341
>gi|300123716|emb|CBK24988.2| unnamed protein product [Blastocystis hominis]
Length = 521
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 254/334 (76%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG ++ A+ ++ + IID+ V+NE + EI+ ALL +DV K+V +++ IK V
Sbjct: 1 MVLAELGKGLTSALSKLQTSVIIDDNVVNEVIKEISNALLHSDVNLKIVMKLRETIKNRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ AAG NK R+IQ+A++ EL ML P + F P +G+ +VIMFVGLQGSGKTTT
Sbjct: 61 TIECQAAGVNKHRVIQRAVYEELVNMLSPVEVQPFKPVRGRSNVIMFVGLQGSGKTTTIG 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+A Y+++KGW+ +VCADTFRAGAFDQLKQNA K K+PFYGSYTESDPV IA +GV F
Sbjct: 121 KFAAYYKRKGWRTCMVCADTFRAGAFDQLKQNAVKVKVPFYGSYTESDPVVIAEQGVSQF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKE+ ++IIVDTSGRHKQE LFEEM+QV +PD ++FV+DS+IGQAAFDQAQAF+++
Sbjct: 181 KKEHFEIIIVDTSGRHKQEEGLFEEMKQVQSHIHPDNIVFVLDSTIGQAAFDQAQAFQRT 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V +G+VI+TK+DG+AKGGGALSAVAAT +P+IF G+GE D+ E F+ FVSRLLGMGD
Sbjct: 241 VDIGSVIITKLDGNAKGGGALSAVAATGAPIIFTGSGEGFDDLEPFEASSFVSRLLGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G + ++ E + + ++++ +G FT+R M
Sbjct: 301 VKGLVREMKEGGMLKVNEDTMKRIQKGKFTIRDM 334
>gi|344245396|gb|EGW01500.1| Signal recognition particle 54 kDa protein [Cricetulus griseus]
Length = 272
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/266 (68%), Positives = 225/266 (84%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG
Sbjct: 2 LKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGV 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQN
Sbjct: 62 KAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKA+IPFYGSYTE DPV IA EGV+ FK EN ++IIVDTSGRHKQE +LFEEM QVS A
Sbjct: 122 ATKARIPFYGSYTEMDPVIIASEGVDKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+I
Sbjct: 182 IQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPII 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGM 297
FIGTGEH+D+FE F +PF+S+LLGM
Sbjct: 242 FIGTGEHIDDFEPFKTQPFISKLLGM 267
>gi|118355606|ref|XP_001011062.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila]
gi|89292829|gb|EAR90817.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila SB210]
Length = 460
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/333 (54%), Positives = 254/333 (76%), Gaps = 2/333 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ D+++LN+ L +I ALLQ+D+ K V+++ NI +
Sbjct: 1 MVLNDLGKKINDALSNLNKDYHFDKQLLNKVLKDIQLALLQSDINVKYVKQLSDNILQKC 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N ++ NK+++IQQ + EL KMLDP K F+ K GKP+V+MFVGLQG+GKTTTC K
Sbjct: 61 N--NIEEAVNKKKLIQQLVVQELTKMLDPKKQPFSLKSGKPNVVMFVGLQGAGKTTTCAK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y +KKGW+ L+CADTFRAGAFDQL+Q ATK +IPFYG+ TE+DPV IA+EGV+TF+
Sbjct: 119 YANYWKKKGWRTCLICADTFRAGAFDQLQQIATKIRIPFYGNRTETDPVAIAIEGVKTFQ 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+N ++II+DTSGRH QE+ LF+EM+Q+ A P+ IFVMD S GQA +QAQAFK++V
Sbjct: 179 KQNFEVIIIDTSGRHMQESELFDEMKQIYSAVCPNECIFVMDGSNGQACLNQAQAFKKAV 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGH+KGGGALSAVAAT+SP+IF+GTGEH D+ E F + FV RLLG+GD+
Sbjct: 239 DVGSVIITKLDGHSKGGGALSAVAATESPIIFLGTGEHFDDLETFKAESFVKRLLGLGDF 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G ++ + EV+ ++ Q + ++++++G FTLR +
Sbjct: 299 KGMIETVSEVIDLESQQQNIKQIAKGQFTLRAL 331
>gi|345569889|gb|EGX52715.1| hypothetical protein AOL_s00007g498 [Arthrobotrys oligospora ATCC
24927]
Length = 511
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 253/331 (76%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q ++ + ++DEK + + EI AL++ADV KLV ++ +I++ V
Sbjct: 1 MVLADLGRRINSAVQDLTRSNLVDEKAFDSMIKEIGNALVEADVNVKLVANLRKSIRQTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL G NK+RIIQ+A+F+ELC+++D + PKKGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFKDLGQGVNKKRIIQKAVFDELCRLVDSHSEPYKPKKGKTNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNATKAK+P+YGSYTE+DPV++A GV+ FK
Sbjct: 121 LARWYNARGFKACLVCADTFRAGAFDQLKQNATKAKVPYYGSYTETDPVKVAKAGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF EM Q+ EA PD I V+D+SIGQ A Q++AFK+S
Sbjct: 181 KERFEIIIVDTSGRHRQETELFAEMVQIQEAVRPDQTIMVLDASIGQQAEAQSKAFKESA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG+A GGGA+SAVAATK+P++FIGTGEH+ + E F+ + ++S+LLGMGD
Sbjct: 241 DFGAIVITKTDGNAAGGGAISAVAATKTPIVFIGTGEHILDMEKFEPQRYISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHIAEGLFTVR 329
>gi|321259271|ref|XP_003194356.1| signal recognition particle 54 kDa protein [Cryptococcus gattii
WM276]
gi|317460827|gb|ADV22569.1| Signal recognition particle 54 kDa protein, putative [Cryptococcus
gattii WM276]
Length = 590
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 255/339 (75%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDSVLKELCAALLESDVNVKLVASLRTKVKAKV 60
Query: 58 -KIVNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
K + + A G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKAGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM + A PD+ + V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVAIGAAVKPDMTLMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LGMGD G ++ + ++ D+Q +L +KL +G FT+R
Sbjct: 301 LGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFTIR 339
>gi|170088384|ref|XP_001875415.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650615|gb|EDR14856.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 543
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/339 (54%), Positives = 256/339 (75%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A I+DEKVL+ L EIT ALL++DV K V ++ +K V
Sbjct: 1 MVLADLGRRLNAALSSLNKAPIVDEKVLDATLKEITAALLESDVNVKFVASLRQKVKAKV 60
Query: 61 --NLDDLAAGH----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
++ AA N++ +IQ+A+F+EL ++DPG + PKKG+P+VIM VGLQG+GK
Sbjct: 61 KATIESAAADKSKETNRKNLIQKAVFDELVALVDPGVEPYKPKKGQPNVIMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++QK+G+K A+VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQKRGFKSAIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE D+IIVDTSGRHKQE+ LFEEM Q+ EA PD+ + ++D+SIGQAA Q++
Sbjct: 181 GVAKFKKERFDVIIVDTSGRHKQESELFEEMVQIGEAVKPDMTVLILDASIGQAAEAQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 241 AFKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LG+GD G M+ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIR 339
>gi|403417915|emb|CCM04615.1| predicted protein [Fibroporia radiculosa]
Length = 360
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/338 (54%), Positives = 252/338 (74%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L E+ ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDALLKEVCAALLESDVNVKLVASLRAKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ I+Q+AIF+EL +++DPG + PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KASLEGGADKGKETNRKNIVQKAIFDELVQLVDPGVEPYKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LFEEM Q+ EA P++ + ++D+SIGQAA Q++A
Sbjct: 181 VSKFKKERFDVIIVDTSGRHKQESELFEEMVQIGEAVKPNMTVLILDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLQDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
G+GD G M+ +H++ D+Q E+ +KL EG ++R
Sbjct: 301 GLGDVQGLMEHMHDLATQNPDKQKEMAKKLEEGKLSIR 338
>gi|393245418|gb|EJD52928.1| signal recognition particle protein [Auricularia delicata TFB-10046
SS5]
Length = 567
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/338 (54%), Positives = 253/338 (74%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ Q++ A ++DEKVL+ L EI ALL++DV KLV ++++ +K
Sbjct: 1 MVLADLGRKLNNALSQLNRAPVVDEKVLDALLKEICAALLESDVNVKLVSQLRSKVKTKA 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++ +AIF+EL +++DPG F PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KAAFEAGADKGKETNRRNVVHKAIFDELVQLVDPGVEPFKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+Q++G+K +VCADTFRAGAFDQ +Q+ATKAK+ FYGSYTE+DPV IA +G
Sbjct: 121 TTCTKLAAYYQRRGFKSCIVCADTFRAGAFDQTRQSATKAKVSFYGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRH+QE+ LF+EM Q+ EA PD+ + V+D+SIGQAA Q++A
Sbjct: 181 VSKFKKERFEVIIVDTSGRHRQESELFQEMVQIGEAVKPDMTVLVLDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESSDFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLTDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
GMGD G M+ +H+V ++Q E+ +K EG ++R
Sbjct: 301 GMGDVQGLMEHMHDVAMQNPEKQKEMAKKFEEGKLSIR 338
>gi|384498168|gb|EIE88659.1| signal recognition particle 54 kDa subunit [Rhizopus delemar RA
99-880]
Length = 745
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 249/326 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ A +IDEKVL+ + +I ALL +DV LV++++TNIKK V
Sbjct: 253 MVLADLGRKINSALSDLTKAPVIDEKVLDSLVKQICAALLASDVNVMLVQKLRTNIKKSV 312
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++LA NK+R+I++A+ +EL +++DP + P K + ++ M VGLQG+GKTTTCTK
Sbjct: 313 NLEELANSANKKRLIEKAVMDELSRLVDPEVEPYKPVKRRTNIFMMVGLQGAGKTTTCTK 372
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q+KGWK ALVCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV IAVEGVE F+
Sbjct: 373 IASFYQRKGWKVALVCADTFRAGAFDQLKQNATKAKIPYYGSYTETDPVTIAVEGVEKFR 432
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++IIVDTSGRHKQE LFEEM+Q+S + PD IFVMD +IGQAA QA+AFK++
Sbjct: 433 AEKFEIIIVDTSGRHKQETELFEEMKQISSSVKPDTTIFVMDGTIGQAAESQAKAFKEAA 492
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
G++I+TKMDGHAKGGGA+SAVAAT SP+IF+G GEH+ + + F+ K F+ ++LG+ D
Sbjct: 493 GFGSIIITKMDGHAKGGGAISAVAATHSPIIFLGVGEHLQDMDRFEPKSFIRKVLGVQDM 552
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEG 326
++ + + + ++ +L++ + +
Sbjct: 553 RDVIEHVQDSINLNDNKKLIKNIEKA 578
>gi|353227294|emb|CCA77807.1| probable signal recognition particle subunit SRP54 [Piriformospora
indica DSM 11827]
Length = 563
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/337 (54%), Positives = 255/337 (75%), Gaps = 6/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLV----REMQTNI 56
MVLA LG ++ A+ ++ + ++DEKVL+E L EIT+ALL++DV KLV ++++ +
Sbjct: 1 MVLADLGRKLNSALSNLNKSPVVDEKVLDELLKEITKALLESDVNVKLVQTLKKQVKAKV 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
K + D + ++ IIQ+AIF+EL +++DPG + PKKG P+VIM VGLQG+GKTT
Sbjct: 61 KPALESTDKSKEGQRKSIIQKAIFDELVQLVDPGVEPYKPKKGHPNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ FYGSYTE+DPV IA EGV
Sbjct: 121 TCTKLAVHYQKRGFKCCIVCADTFRAGAFDQTRQSATKAKVHFYGSYTETDPVAIASEGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE ++IIVDTSGRH+QE+ LFEEM+Q+ A PD+ + V+D+SIGQAA Q++AF
Sbjct: 181 AKFKKERFEVIIVDTSGRHRQESELFEEMKQIQAAVKPDMTVLVLDASIGQAAEAQSRAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+++ + F +PF+S+LLG
Sbjct: 241 KESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLNDLDRFSPEPFISQLLG 300
Query: 297 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
MGD G M+ + ++ D+Q E+ + EG ++R
Sbjct: 301 MGDLRGLMEHMSDLARQNPDRQKEMTKAFEEGKLSIR 337
>gi|392595811|gb|EIW85134.1| signal recognition particle protein [Coniophora puteana RWD-64-598
SS2]
Length = 571
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/337 (54%), Positives = 255/337 (75%), Gaps = 6/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDATLKEITAALLESDVNVKLVASLRSKVKVKV 60
Query: 61 NLD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
D A ++ IIQ+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GKTT
Sbjct: 61 KASLESADKAKDVARKNIIQKAVFDELVHLVDPGVEPYKPKKGQTNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE D+IIVDTSGRHKQE+ LF+EM Q+SEA NP++ + V+D+SIGQAA Q+QAF
Sbjct: 181 TKFKKERFDVIIVDTSGRHKQESELFQEMVQISEAVNPNMTVLVLDASIGQAAEAQSQAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K+S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+LLG
Sbjct: 241 KESADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLYDLDKFSPQPFISKLLG 300
Query: 297 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
+GD G M+ +H++ D+Q ++ +KL EG ++R
Sbjct: 301 LGDMQGLMEHMHDLAMQNPDKQKDMAKKLEEGKLSIR 337
>gi|403371696|gb|EJY85731.1| Signal recognition particle 54 kDa protein, putative [Oxytricha
trifallax]
Length = 561
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 254/334 (76%), Gaps = 1/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+A+++++ AT+IDEKVL + L EI ALL ADV K V +++ +K IV
Sbjct: 1 MVLAELGQKISQALRKLNTATVIDEKVLGDILTEIASALLSADVNIKYVAKLRDAVKTIV 60
Query: 61 NLDDLAAG-HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
L AG N R++IQQ + EL ML+ + KKGKP+V+MFVGLQGSGKTTTCT
Sbjct: 61 TLQMSQAGVANIRKLIQQTVVQELTNMLESENRPYEFKKGKPNVVMFVGLQGSGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+AY++ +KGW+ LVCADTFRAGAF+QLK NA K K PF+G E+DPV+IA EGV F
Sbjct: 121 KFAYHYMRKGWRVGLVCADTFRAGAFEQLKMNAAKIKCPFFGHKKETDPVKIAQEGVNFF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K++ ++IIVDTSGRHKQEAALFEEM+QV A +PD IFVMDSSIGQA +DQA AF ++
Sbjct: 181 KEQKFEIIIVDTSGRHKQEAALFEEMQQVQAAVSPDTSIFVMDSSIGQACYDQATAFNKA 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ VG+VI+TK+DGHAKGGGALSAV+AT+SPV+FIGTGEH D+ E F+ F+ RLLG+GD
Sbjct: 241 IRVGSVIITKLDGHAKGGGALSAVSATQSPVVFIGTGEHFDDLESFNASSFIKRLLGLGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G + + + +P D+Q ++++ + +G F+LR M
Sbjct: 301 IGGLVQTVKDAIPEDKQKKMVENIQKGEFSLRDM 334
>gi|401882649|gb|EJT46899.1| signal recognition particle 54 kDa protein [Trichosporon asahii
var. asahii CBS 2479]
Length = 566
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 254/339 (74%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q S + +DE ++ + E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGARLHGALNQFSKTSSVDETAIDALVKELCAALLESDVNVKLVSQLRAKVKAKV 60
Query: 61 --NLDDL--AAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
NL+D A G NK+ +Q+A+F+EL ++DPG + P KGK +VIM VG+QG+GK
Sbjct: 61 KRNLEDAEKAGGREVNKKNAVQKAVFDELVALVDPGTEPYKPVKGKVNVIMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVTIAYQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM +S+A PD+ + V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVSISKAVKPDMTVMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S G++IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+L
Sbjct: 241 AFKDSSDFGSIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLEKFAPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LGMGD G M+ + ++ D Q +L +KL EG FT+R
Sbjct: 301 LGMGDIQGLMEHMQDMARANPDGQKDLAKKLGEGKFTIR 339
>gi|405120876|gb|AFR95646.1| signal recognition particle protein [Cryptococcus neoformans var.
grubii H99]
Length = 587
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/339 (54%), Positives = 254/339 (74%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDGVLKELCAALLESDVNVKLVASLRTKVKAKV 60
Query: 58 -KIVNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
K + + G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKTGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE D+I+VDTSGRHKQE+ LFEEM + A PD+ + V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFDVIVVDTSGRHKQESELFEEMVAIGAAVKPDMTLMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LGMGD G ++ + ++ D+Q +L +KL +G F++R
Sbjct: 301 LGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFSIR 339
>gi|389748926|gb|EIM90103.1| signal recognition particle protein [Stereum hirsutum FP-91666 SS1]
Length = 570
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/338 (53%), Positives = 253/338 (74%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A+++D+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRASLVDDKVLDALLKEVCAALLESDVNVKLVSQLRQKVKAKV 60
Query: 61 NLDDLAAGH-----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
++G N++ ++Q+AIF+EL ++DPG + P+KG P+VIM VGLQG+GKT
Sbjct: 61 KASLESSGDKVKEVNRKNVVQKAIFDELVNLVDPGVEPYKPRKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRHKQE LFEEM Q+ +A PD+ + VMD+SIGQAA Q+ A
Sbjct: 181 VAKFKKEKFEVIIVDTSGRHKQEGELFEEMVQIGKAVKPDMTVLVMDASIGQAAEAQSSA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+GTGEH+ + + F +PF+S+LL
Sbjct: 241 FKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGTGEHLTDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
GMGD G M+ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 GMGDVQGLMEHMQDLATQNPDRQKEMAKKLEEGKLSIR 338
>gi|340923542|gb|EGS18445.1| hypothetical protein CTHT_0050420 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 514
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 249/331 (75%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPTLDEKTFDLMLKEICTALLEADVNVRLVNQLRKSIRTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GVE FK
Sbjct: 121 LARHYQSRGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM ++ A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEVIIVDTSGRHRQESALFQEMVEIQAAIKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATGTPIVFIGTGEHMLDLERFIPRNFISKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ E ++ +SEG FT+R
Sbjct: 301 PGLVEHVQS-LKLDQK-ETIKHISEGIFTIR 329
>gi|116200506|ref|XP_001226065.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175512|gb|EAQ82980.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 512
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVNDLTRAPNLDEKTFDSMLKTICSALLEADVNVRLVGQLRKSIRSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+++EL ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVYDELVSLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGVE FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPTVVAREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQESALFQEMTDIQTAIKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMFDFERFVPRSFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ E ++ +SEG FT+R
Sbjct: 301 AGLVEHVQS-LKLDQK-ETIKHISEGVFTVR 329
>gi|346321519|gb|EGX91118.1| signal recognition particle 54 kDa protein [Cordyceps militaris
CM01]
Length = 536
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + + EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINSAVTNLTREQNLDEKAFDAMIKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ NK+R+IQ+A+F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFNDIPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + EA PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDIIIVDTSGRHRQESALFQEMVDIQEAIKPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + ++QQ + ++ + EG FT+R
Sbjct: 301 AGLVEHVQS-LNLNQQ-DTMKNIQEGIFTIR 329
>gi|320587877|gb|EFX00352.1| signal recognition particle protein srp54 [Grosmannia clavigera
kw1407]
Length = 530
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 250/331 (75%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A IDEK + L EI AL++ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNIDEKAFDSMLKEIGNALVEADVNVKLVAQLRKSIKGTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTT+CTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHSEPFKPKKGKTNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARHYQSRGFQACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + EA PD I V+D++IGQ A QA+AFK++
Sbjct: 181 KERFDIIIVDTSGRHRQESALFQEMIDIQEAVKPDETIMVLDATIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHAKGGGA+SAVAAT++P++F+GTGEHM + E F + F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAKGGGAISAVAATRTPIVFLGTGEHMLDLERFAPQQFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 TGLIEHVQS-LKLDQK-DTIKHITEGIFTVR 329
>gi|380490983|emb|CCF35637.1| signal recognition particle protein [Colletotrichum higginsianum]
Length = 501
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVTNLTREANLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGVE FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMVDIQTAVRPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTVR 329
>gi|400597588|gb|EJP65318.1| signal recognition particle protein SRP54 [Beauveria bassiana ARSEF
2860]
Length = 529
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 246/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + + EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINSAVTNLTREQNLDEKAFDAMIKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+ NK+R+IQ+A+F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDIPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 121 LARHYQTRGFRSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + EA PD + V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDIIIVDTSGRHRQESALFQEMVDIQEAIKPDETVMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + ++QQ + ++ + EG FT+R
Sbjct: 301 AGLVEHVQS-LNLNQQ-DTMKNIQEGIFTIR 329
>gi|367023521|ref|XP_003661045.1| hypothetical protein MYCTH_2299988 [Myceliophthora thermophila ATCC
42464]
gi|347008313|gb|AEO55800.1| hypothetical protein MYCTH_2299988 [Myceliophthora thermophila ATCC
42464]
Length = 519
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 248/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGQLRKSIRSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARYYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQAAIKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPRNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ E ++ +SEG FT+R
Sbjct: 301 AGLVEHVQS-LKLDQK-ETIKHISEGIFTIR 329
>gi|449547302|gb|EMD38270.1| hypothetical protein CERSUDRAFT_113440 [Ceriporiopsis subvermispora
B]
Length = 571
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/338 (52%), Positives = 254/338 (75%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L E+ ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDALLKEVCAALLESDVNVKLVASLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
+ D N++ +IQ+A+++EL +++DPG + PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KVALEGGADKGKEVNRKSVIQKAVYDELVQLVDPGVEPYKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K ++VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKTSIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ +A P++ + ++D+SIGQAA Q++A
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFQEMVQIGQAVKPNMTVLILDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVA TK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESADFGAIIVTKMDGHAKGGGAISAVAVTKTPIIFLGVGEHLHDLDRFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
G+GD G M+ +H++ D+Q E+ +KL EG ++R
Sbjct: 301 GLGDVQGLMEHMHDLATQNPDKQKEIAKKLEEGKLSIR 338
>gi|395333501|gb|EJF65878.1| signal recognition particle protein [Dichomitus squalens LYAD-421
SS1]
Length = 571
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/338 (53%), Positives = 251/338 (74%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++D+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDDKVLDALLKEVCAALLESDVNVKLVAQLRQKVKTKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++Q+A+F+EL +++DPG + PKKG P+VIM VGLQG+GKT
Sbjct: 61 KAALESGADKGKEQNRRHVVQKAVFDELVQLVDPGVEPYKPKKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+Q++G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQRRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVTIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LF EM Q+ EA PD + V+D+SIGQAA QA+A
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFREMVQIGEAVQPDQTVMVLDASIGQAAEAQARA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
G+GD G ++ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 GLGDMQGLVEHMQDIATQNPDKQKEMAKKLEEGKLSIR 338
>gi|315049435|ref|XP_003174092.1| signal recognition particle protein [Arthroderma gypseum CBS
118893]
gi|311342059|gb|EFR01262.1| signal recognition particle protein [Arthroderma gypseum CBS
118893]
Length = 543
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 241/332 (72%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGKP+VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKPNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LFEEM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFEEMTQIQAAIKPDQTIMVLDSTIGQAAETQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPQPFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + +SEG FTLR
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLR 332
>gi|392558546|gb|EIW51733.1| signal recognition particle protein [Trametes versicolor FP-101664
SS1]
Length = 578
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/338 (53%), Positives = 252/338 (74%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A++ID+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRASVIDDKVLDALLKEVCAALLESDVNVKLVAQLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++Q+AIF+EL ++DPG + PKKG+ +VIM VGLQG+GKT
Sbjct: 61 KAAIEGGADKGKEQNRRNVVQKAIFDELVGLVDPGVEPYKPKKGQSNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ EA P++ + ++D+SIGQAA QA A
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFKEMVQIGEAVKPNMTVMILDASIGQAAEAQAHA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
GMGD G ++ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 GMGDVQGLVEHMQDMATQNPDKQKEMAKKLEEGKLSIR 338
>gi|393216852|gb|EJD02342.1| signal recognition particle protein [Fomitiporia mediterranea
MF3/22]
Length = 578
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/338 (52%), Positives = 254/338 (75%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ + A ++D+KV++ L E+ ALL++DV KLV ++++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLRAAPVVDDKVIDALLKEVCAALLESDVNVKLVSQLRSKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ ++Q+AIF+EL +++DPG S+ P+KG P+VIM VGLQG+GKT
Sbjct: 61 KAQFEAGADRGKEQNRKAVVQKAIFDELVQLVDPGVDSYKPRKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVTIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRHKQE+ LF+EM Q+ EA PD+ + V+D+SIGQAA Q++A
Sbjct: 181 VAKFKKEKFEVIIVDTSGRHKQESELFQEMVQIGEAVKPDMTVLVLDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLTDLDRFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
G+GD G M+ +H++ ++Q E+ +KL EG ++R
Sbjct: 301 GLGDVQGLMEHMHDLANANPEKQKEMAKKLEEGKLSIR 338
>gi|258571053|ref|XP_002544330.1| signal recognition particle 54 kDa protein [Uncinocarpus reesii
1704]
gi|237904600|gb|EEP79001.1| signal recognition particle 54 kDa protein [Uncinocarpus reesii
1704]
Length = 539
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 240/332 (72%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + L EI ALL ADV +LV+E++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSSNLDEKAFDSMLKEICAALLSADVNVRLVQELRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVTLVDPKTEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE +LIIVDTSGRHKQEA LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KEKFELIIVDTSGRHKQEADLFTEMIQIQNAVKPDQTIMVLDSTIGQAAEAQSAAFKSTA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAATK+P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATKTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + +SEG FTLR
Sbjct: 301 ASLVEHVQAVTQGSAGAKETYKHISEGIFTLR 332
>gi|219121088|ref|XP_002185775.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582624|gb|ACI65245.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 510
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 260/347 (74%), Gaps = 13/347 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATI--IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK 58
MVLA+LGG + +++++ +A+ + EK ++ L+++ RAL++ADV KLV +++ +IK
Sbjct: 1 MVLAELGGKLRDSLRKLQSASTQGVTEKEVDALLSDVARALIEADVNVKLVMQLRASIKG 60
Query: 59 IVNLD---------DLAAGHNKRRIIQQAIFNELCKMLDP--GKPSFTPKKGKPSVIMFV 107
V ++ A + + IQ+A+ +EL +L P + ++T +KGKP+V++FV
Sbjct: 61 KVEDLLDDDDEKQPNVRAQRDLAKTIQRAVVDELVALLSPTYAQKAYTMRKGKPNVVLFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTT+ K+A+Y+Q++GWK A+VCADTFRAGAFDQLKQNATK ++PFYGSYTE+D
Sbjct: 121 GLQGAGKTTSIAKFAHYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEAD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQ 227
PV IA +GV F K+ ++IIVDTSGRHKQE+ALF+EM+++SEA PD + VMD++ GQ
Sbjct: 181 PVVIAEDGVRQFVKDRYEVIIVDTSGRHKQESALFDEMQEISEAVRPDNTVLVMDATQGQ 240
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
A +DQA AF +V VGAVIVTK+DGHAKGGGALSAVAAT SP++F+G+GEH D+ + F+
Sbjct: 241 AVYDQALAFHNAVDVGAVIVTKLDGHAKGGGALSAVAATSSPILFLGSGEHFDDLDPFNA 300
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+ FVS+LLG GD G MD + V Q +L++++S+G FTLR+M+
Sbjct: 301 QSFVSKLLGFGDVRGLMDAMKSVTDSKTQEQLMERMSKGEFTLRMMY 347
>gi|409045874|gb|EKM55354.1| hypothetical protein PHACADRAFT_255925 [Phanerochaete carnosa
HHB-10118-sp]
Length = 564
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/338 (53%), Positives = 251/338 (74%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A I+DEKVL+ L ++ ALL+ DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPIVDEKVLDTLLKDVCAALLETDVNVKLVAQLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ I+Q+AIF+EL +++DPG + PKKG+ +VIM VGLQG+GKT
Sbjct: 61 KASLESGADKGKDVNRKSIVQKAIFDELVQLVDPGVEPYKPKKGQSNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ EA P++ I ++D+SIGQAA QA+A
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFQEMVQIGEAVKPNMTIMILDASIGQAAEAQARA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S + GA+IVTKMDGHAKGGGA+SAVA TK+P+IF+G GEH+ + E F +PF+S+LL
Sbjct: 241 FKESSNFGAIIVTKMDGHAKGGGAISAVAVTKTPIIFLGVGEHLHDLEKFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
G+GD G M+ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 GLGDVQGLMEHMQDIATQNPDKQKEIAKKLEEGKLSIR 338
>gi|408393475|gb|EKJ72739.1| hypothetical protein FPSE_07139 [Fusarium pseudograminearum CS3096]
Length = 528
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 243/331 (73%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEKAFDGMLKEICAALLEADVNVKLVGQLRKSIKTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + EA PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQEAIKPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G M+ + + Q + ++ + EG FT+R
Sbjct: 301 AGLMEHVQSLNL--NQKDTIKHIQEGIFTVR 329
>gi|58267554|ref|XP_570933.1| Signal recognition particle 54 kDa protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134112227|ref|XP_775089.1| hypothetical protein CNBE3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257741|gb|EAL20442.1| hypothetical protein CNBE3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227167|gb|AAW43626.1| Signal recognition particle 54 kDa protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 591
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/339 (55%), Positives = 254/339 (74%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI- 59
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDGVLKELCAALLESDVNVKLVASLRTKVKTKV 60
Query: 60 ---VNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
+ + A G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKAGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM + A PD+ + V+D+SIGQAA Q++
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVAIGAAVKPDMTLMVLDASIGQAAEGQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LGMGD G ++ + ++ D+Q +L +KL +G FT+R
Sbjct: 301 LGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFTIR 339
>gi|390597902|gb|EIN07301.1| signal recognition particle protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 562
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 251/337 (74%), Gaps = 6/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ +S A ++DEKVL+ L +I ALL++DV KLV ++++ ++ V
Sbjct: 1 MVLADLGRKLNAALSSLSRAPVVDEKVLDATLKDICAALLESDVNVKLVSQLRSKVRAKV 60
Query: 61 NLD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
D N+R ++Q+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GKTT
Sbjct: 61 KASLESGDKVKDQNRRTVLQKAVFDELVNLVDPGVEPYKPKKGQSNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE ++IIVDTSGRHKQE+ LF+EM Q+ EA P++ I V+D+SIGQAA QA+AF
Sbjct: 181 TKFKKERFEVIIVDTSGRHKQESELFQEMVQIGEAVKPNMTILVLDASIGQAAEAQARAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LLG
Sbjct: 241 KDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLADLDRFSPQPFISKLLG 300
Query: 297 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
+GD G M+ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 LGDMQGLMEHMQDLAQANPDKQKEIAKKLEEGKLSIR 337
>gi|367036313|ref|XP_003648537.1| hypothetical protein THITE_2106112 [Thielavia terrestris NRRL 8126]
gi|346995798|gb|AEO62201.1| hypothetical protein THITE_2106112 [Thielavia terrestris NRRL 8126]
Length = 521
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 248/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGQLRKSIRATV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQAAIRPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPRNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ E ++ +SEG FT+R
Sbjct: 301 AGLVEHVQS-LKLDQK-ETIKHISEGIFTIR 329
>gi|388581255|gb|EIM21564.1| signal recognition particle protein [Wallemia sebi CBS 633.66]
Length = 561
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/337 (54%), Positives = 252/337 (74%), Gaps = 7/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK-- 58
MVLA LG ++ A+ + + +IDEK L+ L EI++ALL++D+ KLV ++ +K
Sbjct: 1 MVLAGLGRQLNSALNSFNKSQVIDEKTLDGLLKEISKALLESDINVKLVGNLRNRVKTRA 60
Query: 59 IVNLDDL-AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
+ D A+G+ +++I+Q+AIF+EL ++DP + + P KGK ++IM VGLQG+GKTT+
Sbjct: 61 LKEFKDTNASGNQQKQIVQKAIFDELVALVDPQEEPYKPTKGKTNIIMAVGLQGAGKTTS 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A ++Q+KG+K LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV I+ GV+
Sbjct: 121 CTKLAVHYQRKGFKVGLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVVISEAGVQ 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKK D+IIVDTSGRHKQE LFEEMR +S+A P + + VMD ++GQAA QA AFK
Sbjct: 181 QFKKSKFDVIIVDTSGRHKQEEDLFEEMRMISQAVKPHMTVLVMDGAMGQAAESQASAFK 240
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IFIGTGE++ + + F +PFV +LLGM
Sbjct: 241 ESSDFGAIIVTKMDGHAKGGGAISAVAATKTPIIFIGTGENLHDIDTFRPRPFVQQLLGM 300
Query: 298 GDWSGFMDKIHEVV---PMDQQPELLQKLSEGNFTLR 331
GD G ++ + +V P D+Q EL +K +G+ ++R
Sbjct: 301 GDMQGLLEHVQDVAMSDP-DKQKELAKKFEQGSLSIR 336
>gi|320583360|gb|EFW97575.1| Signal recognition particle protein [Ogataea parapolymorpha DL-1]
Length = 530
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 254/332 (76%), Gaps = 4/332 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +++ A ++D+ ++ L EI+ AL++ADV KLV ++ +K +
Sbjct: 1 MVLADLGKRINSAVSEVTKANVVDQTAVDGLLKEISNALIEADVNVKLVLNLRKKLKSTI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G NK+++IQ+A+F+ELC ++D + + PKK K +VIMFVGLQG+GKTTTCT
Sbjct: 61 EQEE-KPGVNKKKLIQKAVFDELCDLVDCKETELYKPKKKKTNVIMFVGLQGAGKTTTCT 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y+Q++G+K +VCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV++A +GVE F
Sbjct: 120 KLAVYYQRRGFKVGMVCADTFRAGAFDQLKQNATKAKIPYYGSYTEADPVKVASDGVEKF 179
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKE ++IIVDTSGRH+QE+ LF EM Q+ EA P+ I V+D+SIGQAA Q++AFK+S
Sbjct: 180 KKEKFEIIIVDTSGRHRQESELFAEMIQIGEAVQPNQTIMVLDASIGQAAESQSRAFKES 239
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ GA+I+TKMDGHAKGGGA+SAVAAT +P+ FIGTGEH+++ E F + FVS+LLG+GD
Sbjct: 240 SNFGAIILTKMDGHAKGGGAISAVAATHTPIAFIGTGEHINDLESFTPRQFVSKLLGIGD 299
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G M+ + + +DQ+ + ++ EG FTLR
Sbjct: 300 IQGLMEHVQS-LNLDQK-DTIKNFQEGKFTLR 329
>gi|342881717|gb|EGU82549.1| hypothetical protein FOXB_06915 [Fusarium oxysporum Fo5176]
Length = 476
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 243/331 (73%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + EA PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQEAIKPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G M+ + + Q + ++ + EG FT+R
Sbjct: 301 AGLMEHVQSLNL--NQKDTIKHIQEGIFTVR 329
>gi|322695331|gb|EFY87141.1| signal recognition particle 54 kDa protein [Metarhizium acridum
CQMa 102]
Length = 522
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 242/331 (73%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTRDQNLDEKAFDNMLKEICSALLEADVNVKLVMQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDVIIVDTSGRHRQESALFQEMIDIQTAIRPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + Q + ++ + EG FT+R
Sbjct: 301 AGLVEHVQSLNL--NQKDTIKHIQEGIFTVR 329
>gi|310800676|gb|EFQ35569.1| signal recognition particle protein SRP54 [Glomerella graminicola
M1.001]
Length = 526
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSNLTREPNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +++MFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNIVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMVDIQTAIRPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTVR 329
>gi|440633691|gb|ELR03610.1| signal recognition particle protein SRP54 [Geomyces destructans
20631-21]
Length = 527
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 249/331 (75%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDGMIKEICTALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+++F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLEPSVNKKRLIQKSVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM+ + +A PD I V+DSSIGQ A Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEDALFQEMKDIQDAVKPDQTIMVLDSSIGQQAEAQSKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT++P++FIGTGEHM + E F + FV++LLGMGD
Sbjct: 241 DFGAIIITKTDGSASGGGAISAVAATRTPIVFIGTGEHMLDLERFAPQQFVNKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 QGLVEHVQS-LKLDQK-DTIKHIAEGVFTIR 329
>gi|406860320|gb|EKD13379.1| signal recognition particle protein SRP54 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 525
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSSNLDEKAFDGMIKEICAALLEADVNVRLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D A G NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDQAPGVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGVE FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEDALFQEMVDIQTAVKPDQTIMVLDASIGQQAEAQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHIAEGVFTVR 329
>gi|389585354|dbj|GAB68085.1| signal recognition particle 54 kDa protein [Plasmodium cynomolgi
strain B]
Length = 485
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 248/334 (74%), Gaps = 15/334 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTCALQKLQASAAADDSAIEECLKEVIRALILADINISYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGS KTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSEKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE DLIIVD+SGRHKQE+ LFEEM+QV + P+ ++FV+DS IGQ+
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQVESSIKPEEIVFVIDSHIGQS------------ 228
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 229 ---SIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFEKFEAKSFVSRLLGLGDI 285
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+G + + EV+ +++QP+L+ +LS+G F LR M+
Sbjct: 286 NGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMY 319
>gi|361124020|gb|EHK96146.1| putative Signal recognition particle 54 kDa protein like protein
[Glarea lozoyensis 74030]
Length = 540
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 246/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 12 MVLQDLGRRINAAVSDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKSSV 71
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+R+IQ+ +++EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 72 NFKELAPSVNKKRLIQKTVYDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 131
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K +VCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGVE FK
Sbjct: 132 LARHYQSRGFKACMVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAREGVEKFK 191
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A Q++AFK++
Sbjct: 192 KEKFDIIIVDTSGRHRQEDALFQEMVDIQNAVKPDQTIMVLDASIGQQAEAQSKAFKETA 251
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 252 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPQQFISKLLGMGDM 311
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ + EG FT+R
Sbjct: 312 QGLVEHVQS-LKLDQK-DTMKHIVEGVFTVR 340
>gi|322712654|gb|EFZ04227.1| signal recognition particle 54 kDa protein [Metarhizium anisopliae
ARSEF 23]
Length = 522
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 242/331 (73%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTRDQNLDEKAFDNMLKEICAALLEADVNVKLVMQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDVIIVDTSGRHRQESALFQEMIDIQTAIRPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + Q + ++ + EG FT+R
Sbjct: 301 AGLVEHVQSLNL--NQKDTIKHIQEGIFTVR 329
>gi|237830449|ref|XP_002364522.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii ME49]
gi|211962186|gb|EEA97381.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii ME49]
gi|221507395|gb|EEE32999.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii VEG]
Length = 582
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/274 (66%), Positives = 224/274 (81%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 132 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 191
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 192 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 251
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
++E D+IIVDTSGRHKQEAALF+EM+QV+EA +PD V+FVMDS IGQA FDQAQAF S
Sbjct: 252 RREKYDMIIVDTSGRHKQEAALFDEMKQVAEAVDPDDVVFVMDSHIGQACFDQAQAFSDS 311
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG+VIVTK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+GD
Sbjct: 312 VDVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLGD 371
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G + E+V +++Q EL+ +LS+G FTL M
Sbjct: 372 VGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDM 405
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|221487598|gb|EEE25830.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii GT1]
Length = 714
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/274 (66%), Positives = 225/274 (82%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 132 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 191
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 192 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 251
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
++E D+IIVDTSGRHKQEAALF+EM+QV+EA +PD V+FVMDS IGQA FDQAQAF +S
Sbjct: 252 RREKYDMIIVDTSGRHKQEAALFDEMKQVAEAVDPDDVVFVMDSHIGQACFDQAQAFSES 311
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG+VIVTK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+GD
Sbjct: 312 VDVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLGD 371
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G + E+V +++Q EL+ +LS+G FTL M
Sbjct: 372 VGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDM 405
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|212535310|ref|XP_002147811.1| signal recognition particle protein SRP54 [Talaromyces marneffei
ATCC 18224]
gi|210070210|gb|EEA24300.1| signal recognition particle protein SRP54 [Talaromyces marneffei
ATCC 18224]
Length = 537
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 240/332 (72%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNTLDEKAFDDMLKEICSALLSADVNVRLVQNLRKSIKHSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPSAVNKKRLIQKAVFDELVALVNPHADPFKPKKGRVNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVAAEGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LFEEM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFEEMTQIQNAVRPDQTILVLDSTIGQAAEAQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+G ++ + + E + +SEG +T+R
Sbjct: 301 AGLVEHVQAITKDSAGAKETYKHISEGIYTIR 332
>gi|336377467|gb|EGO18629.1| hypothetical protein SERLADRAFT_454209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 578
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/339 (53%), Positives = 251/339 (74%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A +S AT++DEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAAFSSLSRATVVDEKVLDATLKEITAALLESDVNVKLVASLRQKVKVKV 60
Query: 61 N--LD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
LD D + N++ ++Q+A+F+EL ++DPG + PKKG+ +++M VGLQG+GK
Sbjct: 61 KAALDGGSSDKSKEANRKNLVQKAVFDELVHLVDPGVEPYKPKKGQCNILMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE ++IIVDTSGRHKQE+ LF EM Q+ EA P + I ++D+SIGQAA Q++
Sbjct: 181 GVAKFKKERFEVIIVDTSGRHKQESELFREMVQIGEAVKPHMTILILDASIGQAAEAQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LG+GD G M+ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIR 339
>gi|171676350|ref|XP_001903128.1| hypothetical protein [Podospora anserina S mat+]
gi|170936241|emb|CAP60900.1| unnamed protein product [Podospora anserina S mat+]
Length = 516
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 245/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGRLRKDIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+ L ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDHLVDLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + A PD I V+DSSIGQ A QA AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMMDIQNAIKPDETIMVLDSSIGQQAEGQAMAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P++FIGTGEHM + E F K F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIVFIGTGEHMLDLERFVPKNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTVR 329
>gi|406700686|gb|EKD03851.1| signal recognition particle 54 kDa protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 557
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/335 (54%), Positives = 248/335 (74%), Gaps = 9/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q S + +DE ++ + E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGARLHGALNQFSKTSSVDETAIDALVKELCAALLESDVNVKLVSQLRAKVKAKV 60
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
NL+D + +A+F+EL ++DPG + P KGK +VIM VG+QG+GKTTTC
Sbjct: 61 KRNLEDAEKAGGR-----EAVFDELVALVDPGTEPYKPVKGKVNVIMAVGIQGAGKTTTC 115
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
TK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV IA +GVE
Sbjct: 116 TKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVTIAYQGVEK 175
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
F+KE D+IIVDTSGRHKQE+ LFEEM +S+A PD+ + V+D+SIGQAA Q++AFK
Sbjct: 176 FRKERFDVIIVDTSGRHKQESELFEEMVSISKAVKPDMTVMVLDASIGQAAEGQSRAFKD 235
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
S G++IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+LLGMG
Sbjct: 236 SSDFGSIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLEKFAPQPFISKLLGMG 295
Query: 299 DWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
D G M+ + ++ D Q +L +KL EG FT+R
Sbjct: 296 DIQGLMEHMQDMARANPDGQKDLAKKLGEGKFTIR 330
>gi|169853092|ref|XP_001833227.1| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
gi|116505605|gb|EAU88500.1| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
Length = 574
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/338 (54%), Positives = 250/338 (73%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A +IDEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNSALSSLNRAPVIDEKVLDATLKEITAALLESDVNVKLVASLRQKVKAKV 60
Query: 61 NLDDLAAGH-----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
G NK+ +IQ+A+F+EL ++DPG + P KG+ +VIM VGLQG+GKT
Sbjct: 61 KAALDGQGEKKEPSNKKHLIQKAVFDELVALVDPGVEPYKPVKGRTNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K A+VCADTFRAGAFDQ +Q+ TKAKI ++GSYTE++PV IA +G
Sbjct: 121 TTCTKLAAYYQKRGFKSAIVCADTFRAGAFDQTRQSCTKAKIAYFGSYTETNPVSIAQQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V+ FKKE +++IVDTSGRHKQE LF EM ++SEA PD+ + V+D+SIGQAA QA+A
Sbjct: 181 VQKFKKERFEVVIVDTSGRHKQERELFGEMIEISEAVKPDMTVLVLDASIGQAAEGQAKA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 241 FKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
G+GD G M+ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 GLGDVQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIR 338
>gi|255949096|ref|XP_002565315.1| Pc22g13910 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592332|emb|CAP98679.1| Pc22g13910 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 522
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINSAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVGTLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+ +F+EL K++DP SF PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKTVFDELVKLVDPHADSFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPRAFVQKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+G ++ + + E + ++EG +TLR
Sbjct: 301 AGLVEHVQAMTKDSAGAKETYKHIAEGIYTLR 332
>gi|67469473|ref|XP_650715.1| signal recognition particle protein SRP54 [Entamoeba histolytica
HM-1:IMSS]
gi|56467365|gb|EAL45328.1| signal recognition particle protein SRP54, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407040992|gb|EKE40461.1| signal recognition particle protein SRP54 protein [Entamoeba
nuttalli P19]
gi|449704334|gb|EMD44599.1| signal recognition particle 54 kDa subunit SRP54, putative
[Entamoeba histolytica KU27]
Length = 487
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/331 (53%), Positives = 246/331 (74%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 241 EVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRKLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G + + +++ L EG T+R
Sbjct: 301 KGIAKLAKDFAENAEYKTMVKHLQEGTLTVR 331
>gi|242792738|ref|XP_002482016.1| signal recognition particle protein SRP54 [Talaromyces stipitatus
ATCC 10500]
gi|218718604|gb|EED18024.1| signal recognition particle protein SRP54 [Talaromyces stipitatus
ATCC 10500]
Length = 534
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKAFDDMLKEICSALLSADVNVRLVQSLRKSIKHNV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPSAVNKKRLIQKAVFDELVALVNPHAEPFKPKKGRVNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVAAEGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LFEEM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFEEMTQIQNAVRPDQTILVLDSTIGQAAEAQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+G ++ + + E + +S G +TLR
Sbjct: 301 AGLVEHVQAITKDSAGAKETYKHISAGIYTLR 332
>gi|85098637|ref|XP_960643.1| signal recognition particle 54 kDa protein [Neurospora crassa
OR74A]
gi|28922154|gb|EAA31407.1| signal recognition particle 54 kDa protein [Neurospora crassa
OR74A]
gi|28949956|emb|CAD70717.1| probable signal recognition particle subunit SRP54 [Neurospora
crassa]
gi|336473358|gb|EGO61518.1| hypothetical protein NEUTE1DRAFT_120457 [Neurospora tetrasperma
FGSC 2508]
gi|350293361|gb|EGZ74446.1| signal recognition particle 54 kDa protein [Neurospora tetrasperma
FGSC 2509]
Length = 511
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDGMLKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GV+ FK
Sbjct: 121 LARHYQSRGFRVGLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMMDIQTAVKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPNNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTIR 329
>gi|426200103|gb|EKV50027.1| hypothetical protein AGABI2DRAFT_190440 [Agaricus bisporus var.
bisporus H97]
Length = 562
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/339 (52%), Positives = 251/339 (74%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL+ DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDVMLKEITAALLETDVNVKLVASLRNKVKHKV 60
Query: 61 ------NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
N D A N++ + Q+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GK
Sbjct: 61 KALIEQNAGDKAKEMNRKHLTQKAVFDELVSLVDPGVEPYKPKKGQCNVIMLVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G+K A+VCADTFRAGAFDQ +Q+AT+AK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFKSAIVCADTFRAGAFDQTRQSATRAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE ++IIVDTSGRHKQE+ LF+EM Q+ +A P++ + V+D+SIGQAA Q++
Sbjct: 181 GVSKFKKERFEVIIVDTSGRHKQESELFQEMVQIGDAVKPNMTVLVLDASIGQAAETQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PFVS+L
Sbjct: 241 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFSPQPFVSKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LG+GD G M+ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIR 339
>gi|302691416|ref|XP_003035387.1| hypothetical protein SCHCODRAFT_74858 [Schizophyllum commune H4-8]
gi|300109083|gb|EFJ00485.1| hypothetical protein SCHCODRAFT_74858 [Schizophyllum commune H4-8]
Length = 573
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/337 (53%), Positives = 249/337 (73%), Gaps = 6/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQ----TNI 56
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL++DV KLV ++ T +
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDATLKEITAALLESDVNVKLVASLRSKVKTKV 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
K I D N++ +IQ+A+F+EL ++DPG + PKKG +VIM VGLQG+GKTT
Sbjct: 61 KAIFEGGDKTKDVNRKNVIQKAVFDELVALVDPGVEPYKPKKGHTNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K A+VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVHYQKRGFKSAIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE ++IIVDTSGRHKQE LFEEM + +A PD+ I V+D+SIGQAA QA+AF
Sbjct: 181 AKFKKERFEVIIVDTSGRHKQEQELFEEMILIGQAVKPDMTILVLDASIGQAAEAQARAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+LLG
Sbjct: 241 KDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFAPQPFISKLLG 300
Query: 297 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
+GD G ++ +H++ D+Q E+ +K +G ++R
Sbjct: 301 LGDMQGLIEHMHDLTAQNPDKQKEMAKKFEQGKLSIR 337
>gi|3334340|sp|O15821.1|SRP54_ENTHI RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|17980209|gb|AAL50553.1| signal recognition particle 54 kDa subunit SRP54 [Entamoeba
histolytica]
Length = 487
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/331 (53%), Positives = 246/331 (74%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 241 EVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRQLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G + + +++ L EG T+R
Sbjct: 301 KGIAKLAKDFAENAEYKTMVKHLQEGTLTVR 331
>gi|167385123|ref|XP_001737215.1| signal recognition particle 54 kDa protein [Entamoeba dispar
SAW760]
gi|165900054|gb|EDR26502.1| signal recognition particle 54 kDa protein [Entamoeba dispar
SAW760]
Length = 487
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/331 (53%), Positives = 245/331 (74%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEPFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 241 EVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRKLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G + + +++ L EG T+R
Sbjct: 301 KGIAKLAKDFAENAEYKTMVKHLQEGTLTVR 331
>gi|401411601|ref|XP_003885248.1| Signal recognition particle GTPase, related [Neospora caninum
Liverpool]
gi|325119667|emb|CBZ55220.1| Signal recognition particle GTPase, related [Neospora caninum
Liverpool]
Length = 583
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/274 (65%), Positives = 225/274 (82%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 133 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 192
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+A+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 193 KFAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 252
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+KE D+IIVDTSGRHKQEAALF+EM+QV+EA +PD V+FVMDS IGQA F+QAQAF +S
Sbjct: 253 RKEKYDMIIVDTSGRHKQEAALFDEMKQVAEAVDPDDVVFVMDSHIGQACFEQAQAFSES 312
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG+VI+TK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+GD
Sbjct: 313 VDVGSVIITKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLGD 372
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G + E+V +++Q EL+ +LS+G FTL M
Sbjct: 373 VGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDM 406
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|70984902|ref|XP_747957.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
Af293]
gi|66845585|gb|EAL85919.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
Af293]
gi|159126118|gb|EDP51234.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
A1163]
Length = 522
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 240/332 (72%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDDMLKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPPAVNKKRLIQKAVFDELVALVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEVIIVDTSGRHKQEEELFTEMTQIQNAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 241 NFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + ++EG +TLR
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHIAEGIYTLR 332
>gi|326469041|gb|EGD93050.1| signal recognition particle 54K protein [Trichophyton tonsurans CBS
112818]
Length = 534
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFTEMTQIQSAIKPDQTIMVLDSTIGQAAETQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + +SEG FTLR
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLR 332
>gi|336264067|ref|XP_003346812.1| hypothetical protein SMAC_05070 [Sordaria macrospora k-hell]
gi|380090282|emb|CCC11858.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 512
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/331 (54%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDGMLKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GV+ FK
Sbjct: 121 LARHYQSRGFRVGLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE +LF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEESLFQEMMDIQTAVKPDETIMVLDASIGQQAEAQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F F+S+LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPNNFISKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 AGLVEHVQS-LKLDQK-DTIKHITEGIFTIR 329
>gi|327294833|ref|XP_003232112.1| signal recognition particle 54K protein [Trichophyton rubrum CBS
118892]
gi|326466057|gb|EGD91510.1| signal recognition particle 54K protein [Trichophyton rubrum CBS
118892]
Length = 534
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFAEMTQIQSAIKPDQTIMVLDSTIGQAAETQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + +SEG FTLR
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLR 332
>gi|358371589|dbj|GAA88196.1| signal recognition particle 54K protein homolog (SrpA) [Aspergillus
kawachii IFO 4308]
Length = 534
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + +SEG +TLR
Sbjct: 301 AGLVEHVQAVTKDSASAKETYKHISEGIYTLR 332
>gi|409082272|gb|EKM82630.1| hypothetical protein AGABI1DRAFT_111220 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 562
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/339 (52%), Positives = 251/339 (74%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL+ DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDVMLKEITAALLETDVNVKLVASLRNKVKHKV 60
Query: 61 ------NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
N D A N++ + Q+A+F+EL ++DPG + PKKG+ +V+M VGLQG+GK
Sbjct: 61 KALIEQNAGDKAKEMNRKHLTQKAVFDELVSLVDPGVEPYKPKKGQCNVVMLVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G+K A+VCADTFRAGAFDQ +Q+AT+AK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFKSAIVCADTFRAGAFDQTRQSATRAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE ++IIVDTSGRHKQE+ LF+EM Q+ +A P++ + V+D+SIGQAA Q++
Sbjct: 181 GVSKFKKERFEVIIVDTSGRHKQESELFQEMVQIGDAVKPNMTVLVLDASIGQAAEAQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFSPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLR 331
LG+GD G M+ + ++ D+Q E+ +KL EG ++R
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIR 339
>gi|296817061|ref|XP_002848867.1| signal recognition particle protein [Arthroderma otae CBS 113480]
gi|238839320|gb|EEQ28982.1| signal recognition particle protein [Arthroderma otae CBS 113480]
Length = 535
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVIVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFAEMTQIQAAIKPDQTIMVLDSTIGQAAESQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPQPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + +SEG FTLR
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLR 332
>gi|115433004|ref|XP_001216639.1| signal recognition particle 54 kDa protein [Aspergillus terreus
NIH2624]
gi|114189491|gb|EAU31191.1| signal recognition particle 54 kDa protein [Aspergillus terreus
NIH2624]
Length = 526
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPSAVNKKRLIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + +SEG +TLR
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHISEGIYTLR 332
>gi|303319737|ref|XP_003069868.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109554|gb|EER27723.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 530
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 237/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHSEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNAVKPDQTILVLDSSIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + +SEG FTLR
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLR 332
>gi|119183283|ref|XP_001242701.1| hypothetical protein CIMG_06597 [Coccidioides immitis RS]
gi|392865609|gb|EAS31408.2| signal recognition particle protein SRP54 [Coccidioides immitis RS]
Length = 530
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 237/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHTEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNAVKPDQTILVLDSSIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + +SEG FTLR
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLR 332
>gi|346975514|gb|EGY18966.1| srp54-like protein [Verticillium dahliae VdLs.17]
Length = 525
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 243/331 (73%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSDLTRAPNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+ +F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKTVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQARGLKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQEENLFQEMVDIQAAIKPDETIMVLDASIGQQAESQAKAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+ ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 301 ASLVEHVQS-LKLDQK-DTMKHITEGIFTVR 329
>gi|326480631|gb|EGE04641.1| signal recognition particle protein [Trichophyton equinum CBS
127.97]
Length = 534
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTQGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFTEMTQIQSAIKPDQTIMVLDSTIGQAAETQSAAFKSAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + +SEG FTLR
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHISEGIFTLR 332
>gi|425773702|gb|EKV12037.1| Signal recognition particle protein SRP54 [Penicillium digitatum
Pd1]
gi|425776013|gb|EKV14252.1| Signal recognition particle protein SRP54 [Penicillium digitatum
PHI26]
Length = 523
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINSAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVGTLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+ +F+EL K++DP SF PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKTVFDELVKLVDPRADSFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF EM Q+ A PD I V+DS+IGQ+A Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEELFTEMTQIQTAVTPDQTILVLDSTIGQSAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ + FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPRAFVQKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+G ++ + + E + ++EG +TLR
Sbjct: 301 AGLVEHVQAMTKDSAGAKETYKHIAEGIYTLR 332
>gi|317031653|ref|XP_001393946.2| signal recognition particle protein [Aspergillus niger CBS 513.88]
Length = 533
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/332 (54%), Positives = 238/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + +SEG +TLR
Sbjct: 301 AGLVEHVQAVTKDSASAKETYKHISEGIYTLR 332
>gi|320034158|gb|EFW16103.1| signal recognition particle protein SRP54 [Coccidioides posadasii
str. Silveira]
Length = 530
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 237/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHSEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNAVKPDQTILVLDSSIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLR 331
+ ++ + V E + ++EG FTLR
Sbjct: 301 ASLVEHVQAVTKDSAGAKETYKHIAEGIFTLR 332
>gi|342321672|gb|EGU13604.1| Signal recognition particle 54 kDa protein, putative [Rhodotorula
glutinis ATCC 204091]
Length = 612
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/348 (51%), Positives = 257/348 (73%), Gaps = 17/348 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ AI ++ + IDE+ L+ L + ALL++DV LV+ ++ +K V
Sbjct: 1 MVLQDLGKRLNTAINSLTQQSAIDEQALDAVLKSVCAALLESDVNVLLVKRLRDKVKGKV 60
Query: 61 --NLDDLAA----------GHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIM 105
L+++ A G+ ++IIQ+AI++EL ++DPG P+F P KGK VIM
Sbjct: 61 LPQLEEIQAKQGQDADAMQGNKAKQIIQKAIYDELVALVDPGDAAPPAFNPVKGKTQVIM 120
Query: 106 FVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE 165
VGLQG+GKTTTCTK A ++Q++G K ALVCADTFRAGAFDQLKQNATKAK+PF+GSYTE
Sbjct: 121 MVGLQGAGKTTTCTKLATHYQRRGLKVALVCADTFRAGAFDQLKQNATKAKVPFFGSYTE 180
Query: 166 SDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSI 225
+DPV I+++GV F+ E D+IIVDTSGRH+QE+ LF+EMRQ+ +A P++V+ V+D +I
Sbjct: 181 TDPVSISLQGVTKFRSERFDVIIVDTSGRHRQESELFDEMRQIQDAVEPNMVVLVLDGAI 240
Query: 226 GQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVF 285
GQAA Q++AFK++ + GA+IVTK+DGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F
Sbjct: 241 GQAAEAQSRAFKEASNFGAIIVTKLDGHAKGGGAISAVAATNTPIIFIGTGEHLHDLEKF 300
Query: 286 DVKPFVSRLLGMGDWSGFMDKIHE--VVPMDQQPELLQKLSEGNFTLR 331
+PF+S++LGMGD G +++ E + ++Q ++++KL +G FT+R
Sbjct: 301 SPQPFISKMLGMGDMQGLVERAQEMALANPERQEKMMKKLEKGEFTVR 348
>gi|406606416|emb|CCH42190.1| Signal recognition particle subunit SRP54 [Wickerhamomyces
ciferrii]
Length = 533
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/330 (53%), Positives = 250/330 (75%), Gaps = 2/330 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ + +++ ++ L EI ALL++DV KLV +++ +IK +
Sbjct: 1 MVLVDLGRRINTAVSGAIKSNEVNDDAIDLMLKEICNALLESDVNVKLVVKLRKDIKHKL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + G NK+++IQ+ +F+ELC+++D + PKKGK +VIMFVGLQG+GKTT+CTK
Sbjct: 61 NAEGEKPGINKKKLIQKVVFDELCRLVDTETEPYKPKKGKSNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q++G+K LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE++PV+++ +GV+ FK
Sbjct: 121 LAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKARIPFYGSYTETNPVKVSKDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE LF+EM ++ EA P+ I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KEKFDIIIVDTSGRHRQEEDLFQEMIEIGEAVEPNQTIMVLDASIGQAAESQSKAFKESS 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ G++I+TK+DGHAKGGGA+SAVAAT +P++FIGTGEH+ +FE F + F+S+LLG+GD
Sbjct: 241 NFGSIILTKLDGHAKGGGAISAVAATNTPIVFIGTGEHVQDFETFSPRSFISKLLGIGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G M+ + + +D + + ++ L EG FTL
Sbjct: 301 QGLMEHVQS-LDLDNK-DTMKNLQEGKFTL 328
>gi|238503263|ref|XP_002382865.1| signal recognition particle protein SRP54 [Aspergillus flavus
NRRL3357]
gi|220691675|gb|EED48023.1| signal recognition particle protein SRP54 [Aspergillus flavus
NRRL3357]
Length = 527
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 238/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVALVNPHADPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + +SEG +T+R
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHISEGIYTVR 332
>gi|46130818|ref|XP_389140.1| hypothetical protein FG08964.1 [Gibberella zeae PH-1]
Length = 521
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 241/331 (72%), Gaps = 9/331 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEK-------EICAALLEADVNVKLVGQLRKSIKTTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 114 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + EA PD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KERFEVIIVDTSGRHRQESALFQEMVDIQEAIKPDETIMVLDASIGQQAESQAKAFKEAA 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 234 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGDM 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G M+ + + Q + ++ + EG FT+R
Sbjct: 294 AGLMEHVQSLNL--NQKDTIKHIQEGIFTVR 322
>gi|299117528|emb|CBN75372.1| SRP54, GTPase subunit of the signal recognition particle (Partial)
[Ectocarpus siliculosus]
Length = 507
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/348 (51%), Positives = 251/348 (72%), Gaps = 16/348 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A++++ T++D + + + +I RALL++DV ++V +++ N++
Sbjct: 1 MVLQELGSKLTSALRRLHTDTVVDRETVKAVVGDICRALLESDVNVQMVMKLRKNVE--A 58
Query: 61 NLDDLAA------------GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVG 108
+ L A +RR IQ+A+ +EL MLDP + +KG+ +V+MFVG
Sbjct: 59 KAESLVAEQQDGGAGGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMRKGRSNVVMFVG 118
Query: 109 LQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDP 168
LQG+GKTTT K+A+Y Q+KGWK A+VCADTFRAGAFDQLKQNATK + PFYGSY+E+DP
Sbjct: 119 LQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADP 178
Query: 169 VRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQA 228
VRIA EGV+ FK+E ++IIVDTSGRHKQE ALF+EM+++ EA PD +MD++ GQA
Sbjct: 179 VRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQA 238
Query: 229 AFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVK 288
FDQA+AF ++V+VG+VI+TK+DGHAKGGGALSAVAAT SP+ F+G GEH D+ E FD +
Sbjct: 239 VFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQ 298
Query: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLS-EGNFTLRIMF 334
FVSRLLG GD G M +I E P E+++++S +G FTLR ++
Sbjct: 299 SFVSRLLGFGDMKGLMRQIQESQEGSGDPKEMMERISNKGKFTLRDLY 346
>gi|169776553|ref|XP_001822743.1| signal recognition particle protein [Aspergillus oryzae RIB40]
gi|83771478|dbj|BAE61610.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 527
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 238/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVALVNPHADPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMD-QQPELLQKLSEGNFTLR 331
+G ++ + V E + +SEG +T+R
Sbjct: 301 AGLVEHVQAVTKDSVAAKETYKHISEGIYTVR 332
>gi|19075709|ref|NP_588209.1| signal recognition particle subunit Srp54 [Schizosaccharomyces
pombe 972h-]
gi|134887|sp|P21565.1|SRP54_SCHPO RecName: Full=Signal recognition particle 54 kDa protein homolog;
Short=SRP54
gi|5096|emb|CAA35951.1| signal recognition particle [Schizosaccharomyces pombe]
gi|173491|gb|AAA35344.1| signal recognition particle 54 kDa subunit [Schizosaccharomyces
pombe]
gi|4678686|emb|CAB41226.1| signal recognition particle subunit Srp54 [Schizosaccharomyces
pombe]
Length = 522
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 254/331 (76%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV A LG ++ A+ S AT ++E++++ L I ALL+ DV +LV+E+++NIKK +
Sbjct: 1 MVFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L G N +RI+Q+A+F+ELC ++DP +FTPKKG+PSVIM VGLQGSGKTTTC+K
Sbjct: 61 NVSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q++G K LV ADTFRAGAFDQLKQNA KA++P++GSYTE+DPV IA EGV+ FK
Sbjct: 121 LALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+IIVDTSGRH+QE LF EM ++S+A PD I ++D+SIGQAA Q++AFK++
Sbjct: 181 NDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GAVI+TK+DGHAKGGGALSAVAATK+P++FIGTGEH+++ E F + F+S+LLG+GD
Sbjct: 241 DFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G M+ + + D++ +++ L +G FT+R
Sbjct: 301 EGLMEHVQS-LDFDKK-NMVKNLEQGKFTVR 329
>gi|402225128|gb|EJU05189.1| signal recognition particle protein [Dacryopinax sp. DJM-731 SS1]
Length = 558
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/338 (52%), Positives = 250/338 (73%), Gaps = 7/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ AI ++ + ID+K L+ L EI ALL++DV KLV +++ ++ V
Sbjct: 1 MVLADLGRRINSAISSLNRSPTIDDKQLDAALKEICTALLESDVNVKLVASLRSRVRTKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D A +R ++Q+ +F+EL +++PG + PKKG+ ++IM VGLQG+GKT
Sbjct: 61 KAALEGGADKAKEAQRRNVVQKTVFDELVSLVNPGVEPYKPKKGQSNIIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
VE F+KE ++IIVDTSGRHKQE LF EM Q+S A PD+ I V+D+SIGQAA Q++A
Sbjct: 181 VEKFRKERFEIIIVDTSGRHKQEKDLFAEMEQISAAVKPDMTILVLDASIGQAAEAQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK++ GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+GTGEH+ + E F +PF+S++L
Sbjct: 241 FKEAADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGTGEHLSDLERFAPEPFISKML 300
Query: 296 GMGDWSGFMDKIHEVVPMD--QQPELLQKLSEGNFTLR 331
GMGD G ++++ E+ D +Q E+++ L +G F+++
Sbjct: 301 GMGDIQGLVEQMQEMAQRDPEKQKEVMKNLEQGKFSIK 338
>gi|226739|prf||1604366A signal recognition particle 54kD protein
Length = 522
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 254/331 (76%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV A LG ++ A+ S AT ++E++++ L I ALL+ DV +LV+E+++NIKK +
Sbjct: 1 MVFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L G N +RI+Q+A+F+ELC ++DP +FTPKKG+PSVIM VGLQGSGKTTTC+K
Sbjct: 61 NVSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q++G K LV ADTFRAGAFDQLKQNA KA++P++GSYTE+DPV IA EGV+ FK
Sbjct: 121 LALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+IIVDTSGRH+QE LF EM ++S+A PD I ++D+SIGQAA Q++AFK++
Sbjct: 181 NDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GAVI+TK+DGHAKGGGALSAVAATK+P++FIGTGEH+++ E F + F+S+LLG+GD
Sbjct: 241 DFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G M+ + + D++ +++ L +G FT+R
Sbjct: 301 EGLMEHVQS-LDFDKK-NMVKNLEQGKFTVR 329
>gi|121718228|ref|XP_001276141.1| signal recognition particle protein SRP54 [Aspergillus clavatus
NRRL 1]
gi|119404339|gb|EAW14715.1| signal recognition particle protein SRP54 [Aspergillus clavatus
NRRL 1]
Length = 524
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/332 (53%), Positives = 238/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPPAVNKKRLIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEDLFTEMTQIQNAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + ++EG +T+R
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHIAEGIYTVR 332
>gi|340519181|gb|EGR49420.1| signal recognition particle subunit srp54 [Trichoderma reesei QM6a]
Length = 520
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 240/331 (72%), Gaps = 9/331 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRSTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQTRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + A NPD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KEKFDVIIVDTSGRHRQESALFQEMIDIQAAVNPDETIMVLDASIGQQAEAQAKAFKEAA 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 234 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGDM 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + Q + ++ L EG FT+R
Sbjct: 294 AGLVEHVQSLNL--NQKDTMKHLQEGIFTVR 322
>gi|336364891|gb|EGN93244.1| hypothetical protein SERLA73DRAFT_172158 [Serpula lacrymans var.
lacrymans S7.3]
Length = 566
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 246/335 (73%), Gaps = 8/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A +S AT++DEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAAFSSLSRATVVDEKVLDATLKEITAALLESDVNVKLVASLRQKVKVKV 60
Query: 61 N--LD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
LD D + N++ ++Q+A+F+EL ++DPG + PKKG+ +++M VGLQG+GK
Sbjct: 61 KAALDGGSSDKSKEANRKNLVQKAVFDELVHLVDPGVEPYKPKKGQCNILMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV FKKE ++IIVDTSGRHKQE+ LF EM Q+ EA P + I ++D+SIGQAA Q++
Sbjct: 181 GVAKFKKERFEVIIVDTSGRHKQESELFREMVQIGEAVKPHMTILILDASIGQAAEAQSR 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 241 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKL 300
Query: 295 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGN 327
LG+GD G M+ + ++ D+Q E+ +K G
Sbjct: 301 LGLGDMQGLMEHMQDLATQNPDKQKEMAKKTRRGE 335
>gi|223993863|ref|XP_002286615.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
gi|220977930|gb|EED96256.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 451
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/347 (52%), Positives = 254/347 (73%), Gaps = 13/347 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNAT--IIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK 58
MVLA+LGG + +++++ + + I + LN L+EI+RAL+++DV KLV +++NI+K
Sbjct: 1 MVLAELGGKLRDSLRKLQSPSGDAITAETLNGILSEISRALIESDVNVKLVMTLRSNIQK 60
Query: 59 IVN-------LDDLAAGHNKRRIIQQAIFNELCKMLDP----GKPSFTPKKGKPSVIMFV 107
V + A N R++Q+A+ +EL ML P ++ K+GKP++I+FV
Sbjct: 61 KVGALVSSDNANSAANNANIARLVQRAVVDELTSMLTPNGENATKAYVMKRGKPNIILFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTT+ KYA+Y+Q+KGWK A+VCADTFRAGAFDQLKQNATK +IPFYGSYTE+D
Sbjct: 121 GLQGAGKTTSIAKYAHYYQRKGWKTAMVCADTFRAGAFDQLKQNATKLRIPFYGSYTEAD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQ 227
PV IA EGVE F + ++IIVDTSGRH+QE LFEEM+++S A PD IFVMD++ GQ
Sbjct: 181 PVLIAEEGVERFISDGYEIIIVDTSGRHRQEETLFEEMQEISAAVRPDNTIFVMDATQGQ 240
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
A +DQA AF +V+VG+VIVTK+DGHAKGGGALSAV+AT SP++F+G+GE ++ + F+
Sbjct: 241 AVYDQALAFHGAVNVGSVIVTKLDGHAKGGGALSAVSATGSPIVFLGSGERFEDLDPFNA 300
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
K FVS+LLG GD G M+++ + Q EL++ + +G FTLR M+
Sbjct: 301 KSFVSKLLGFGDVRGLMEEMKSLNSDKNQEELMKNMQKGQFTLRDMY 347
>gi|389628338|ref|XP_003711822.1| signal recognition particle protein [Magnaporthe oryzae 70-15]
gi|351644154|gb|EHA52015.1| signal recognition particle protein [Magnaporthe oryzae 70-15]
Length = 510
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/331 (54%), Positives = 246/331 (74%), Gaps = 8/331 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK +I ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKA------KICAALLEADVNVRLVGQLRKSIKSTV 54
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 55 NFKELPPAVNKKRLIQKAVFDELVSLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 114
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 115 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE+ALF+EM + +A PD I V+D+SIGQ A QA+AFK++
Sbjct: 175 KERFEVIIVDTSGRHRQESALFQEMMDIQKAVKPDETIMVLDASIGQQAEAQAKAFKEAA 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 235 DFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFISKLLGMGDM 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 295 AGLVEHVQS-LKLDQK-DTIKHITEGIFTIR 323
>gi|67902518|ref|XP_681515.1| SR54_ASPNG SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN HOMOLOG
[Aspergillus nidulans FGSC A4]
gi|40739794|gb|EAA58984.1| SR54_ASPNG SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN HOMOLOG
[Aspergillus nidulans FGSC A4]
gi|259481033|tpe|CBF74199.1| TPA: hypothetical protein similar to srpA gene product (Broad)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/339 (53%), Positives = 239/339 (70%), Gaps = 8/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVL-------NECLNEITRALLQADVQFKLVREMQ 53
MVL LG I+ A+ ++ + +DEK+L E L EI ALL ADV +LV+ ++
Sbjct: 1 MVLQDLGRRINAAVNDLTRSPNLDEKMLILGVKAFEEMLKEICAALLSADVNVRLVQSLR 60
Query: 54 TNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSG 113
+IK VN L A NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+G
Sbjct: 61 KSIKASVNFASLPAAVNKKRVIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAG 120
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTTTCTK A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A
Sbjct: 121 KTTTCTKLARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAA 180
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQA 233
EGV FKKE ++IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+
Sbjct: 181 EGVAKFKKERFEIIIVDTSGRHKQEEQLFTEMTQIQTAVTPDQTILVLDGTIGQAAEVQS 240
Query: 234 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 293
AFK + GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +
Sbjct: 241 SAFKATADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQK 300
Query: 294 LLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
LLGMGD +G ++ + V E + ++EG +TLR
Sbjct: 301 LLGMGDMAGLVEHVQAVTKDSAAAKETYKHIAEGIYTLR 339
>gi|3334345|sp|Q00179.1|SRP54_ASPNG RecName: Full=Signal recognition particle 54 kDa protein homolog
gi|598061|gb|AAB04946.1| srpA [Aspergillus niger]
gi|134078502|emb|CAK40424.1| signal recognition particle 54K protein homolog srpA-Aspergillus
niger
gi|350640222|gb|EHA28575.1| hypothetical protein ASPNIDRAFT_56880 [Aspergillus niger ATCC 1015]
gi|1586559|prf||2204256A srpA gene
Length = 534
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/333 (54%), Positives = 238/333 (71%), Gaps = 2/333 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEK-VLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKQAFDDMIKEICAALLSADVNVRLVQSLRKSIKSS 60
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
VN L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCT
Sbjct: 61 VNFASLPPAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV F
Sbjct: 121 KLARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KKE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KKERFEIIIVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAFKAT 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMGD
Sbjct: 241 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + +SEG +TLR
Sbjct: 301 MAGLVEHVQAVTKDSASAKETYKHISEGIYTLR 333
>gi|358382412|gb|EHK20084.1| hypothetical protein TRIVIDRAFT_48175 [Trichoderma virens Gv29-8]
Length = 517
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/331 (54%), Positives = 240/331 (72%), Gaps = 9/331 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRSTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQSRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRH+QE+ALF+EM + A +PD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KEKFDVIIVDTSGRHRQESALFQEMIDIQAAVSPDETIMVLDASIGQQAEAQAKAFKEAA 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 234 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGDM 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + Q + ++ L EG FT+R
Sbjct: 294 AGLVEHVQSLNL--NQKDTMKHLQEGIFTVR 322
>gi|302896050|ref|XP_003046905.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727833|gb|EEU41192.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 518
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 240/331 (72%), Gaps = 6/331 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVNNLTREQNLDEK----AGPEICAALLEADVNVRLVGQLRKSIRTTV 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP SF PKKGK SVIMFVGLQG+GKTTTCTK
Sbjct: 57 NFKELPPAVNKKRLIQKAVFDELVKLVDPHADSFRPKKGKSSVIMFVGLQGAGKTTTCTK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 117 LARHYQSRGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARAGVEQFK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ ++IIVDTSGRH+QE+ALF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 177 KDRFEVIIVDTSGRHRQESALFQEMIDIQNAIQPDETIMVLDASIGQQAESQAKAFKEAA 236
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 237 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPQQFVQKLLGMGDM 296
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G M+ + + Q + ++ + EG FT+R
Sbjct: 297 AGLMEHVQSLNL--NQKDTIKHIQEGIFTVR 325
>gi|154290868|ref|XP_001546023.1| hypothetical protein BC1G_15366 [Botryotinia fuckeliana B05.10]
Length = 311
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 231/310 (74%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+++IQ+A+++EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELAPAVNKKKVIQKAVYDELVKLVDPHAEPFKPKKGKANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARWYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD + VMD+SIGQ A Q++AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEDALFQEMVDIQTAVKPDQTVMVMDASIGQQAEAQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IFIGTGEHM + E F FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIIFIGTGEHMLDLEKFAPTQFVSKLLGMGDM 300
Query: 301 SGFMDKIHEV 310
G M+ + +
Sbjct: 301 QGLMEHVQSL 310
>gi|358392739|gb|EHK42143.1| hypothetical protein TRIATDRAFT_31697 [Trichoderma atroviride IMI
206040]
Length = 519
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/331 (54%), Positives = 240/331 (72%), Gaps = 9/331 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRGAV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQSRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ D+IIVDTSGRH+QE+ALF+EM + A NPD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KDKFDVIIVDTSGRHRQESALFQEMIDIQAAVNPDETIMVLDASIGQQAESQAKAFKEAA 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 234 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGDM 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+G ++ + + Q + ++ + EG FT+R
Sbjct: 294 AGLVEHVQSLNL--NQKDTMKHIQEGIFTVR 322
>gi|347835299|emb|CCD49871.1| similar to signal recognition particle 54 kda protein [Botryotinia
fuckeliana]
Length = 309
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/308 (56%), Positives = 230/308 (74%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+++IQ+A+++EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELAPAVNKKKVIQKAVYDELVKLVDPHAEPFKPKKGKANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARWYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE ALF+EM + A PD + VMD+SIGQ A Q++AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEDALFQEMVDIQTAVKPDQTVMVMDASIGQQAEAQSKAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IFIGTGEHM + E F FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGHASGGGAISAVAATHTPIIFIGTGEHMLDLEKFAPTQFVSKLLGMGDM 300
Query: 301 SGFMDKIH 308
G M+ +
Sbjct: 301 QGLMEHVQ 308
>gi|322802263|gb|EFZ22659.1| hypothetical protein SINV_03515 [Solenopsis invicta]
Length = 275
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 168/263 (63%), Positives = 219/263 (83%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A PD +IFVMD++IGQA QA+AFK+ V
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANAVQPDNIIFVMDATIGQACEAQAKAFKERV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAV 263
+VG++I+TK+DGHAKGGGALSA+
Sbjct: 241 NVGSIIITKLDGHAKGGGALSAL 263
>gi|443894400|dbj|GAC71748.1| signal recognition particle, subunit Srp54 [Pseudozyma antarctica
T-34]
Length = 645
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 254/362 (70%), Gaps = 31/362 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP--GK-----------PS-------- 93
L+D A + +R+ +Q+A+F+ L ++DP G+ PS
Sbjct: 61 TALLNDKANANWSDAQRRQRVQKAVFDHLVALVDPLHGQSTTDDESGAVVPSANAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDAAVT 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDL I V+D++IGQAA Q++AFK + GA+IVTK+DGHAKGGGA+SAVAATK+P++FI
Sbjct: 241 PDLTIMVLDANIGQAAEAQSRAFKDAAGYGAIIVTKLDGHAKGGGAISAVAATKTPIMFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-FT 329
GTGEH + E F +PF+S+LLGMGD +G MDK+ E+ ++Q E+L+K+ EG F+
Sbjct: 301 GTGEHAADLEPFRAQPFISKLLGMGDITGLMDKMEEMQMNGGQERQREMLKKIEEGGIFS 360
Query: 330 LR 331
+R
Sbjct: 361 IR 362
>gi|71015804|ref|XP_758844.1| hypothetical protein UM02697.1 [Ustilago maydis 521]
gi|46098350|gb|EAK83583.1| hypothetical protein UM02697.1 [Ustilago maydis 521]
Length = 638
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 185/362 (51%), Positives = 251/362 (69%), Gaps = 31/362 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP-------------------GKPS-- 93
L+D + +R+ +Q+A+F+ L ++DP P
Sbjct: 61 TALLNDKTNANWSDAQRRQRVQKAVFDHLVALVDPLHGQTKTDDDSGAVVASANAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDTAVT 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDL I V+D++IGQAA Q++AFKQ+ GA+IVTK+DGHAKGGGA+SAVAATK+P++FI
Sbjct: 241 PDLTIMVLDANIGQAAEAQSRAFKQAAGYGAIIVTKLDGHAKGGGAISAVAATKTPIMFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-FT 329
GTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ +G F+
Sbjct: 301 GTGEHAADLEPFRAQPFISKLLGMGDISGLMDKMEEMQMNGGQERQQEMLKKIGQGGIFS 360
Query: 330 LR 331
+R
Sbjct: 361 IR 362
>gi|119498779|ref|XP_001266147.1| signal recognition particle protein SRP54 [Neosartorya fischeri
NRRL 181]
gi|119414311|gb|EAW24250.1| signal recognition particle protein SRP54 [Neosartorya fischeri
NRRL 181]
Length = 522
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 239/332 (71%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDDMLKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 SFSSLPPAVNKKRLIQKAVFDELVALVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRHKQE LF EM Q+ A PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEVIIVDTSGRHKQEEELFTEMTQIQNAVTPDQTILVLDSTIGQAAEAQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 241 DFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + ++EG +TLR
Sbjct: 301 AGLVEHVQAVTKDSAAAKETYKHIAEGIYTLR 332
>gi|388853536|emb|CCF52935.1| probable SRP54-signal recognition particle subunit [Ustilago
hordei]
Length = 646
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 254/362 (70%), Gaps = 31/362 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSRVKAQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP--GK-----------PS-------- 93
L+D A + +R+ +Q+A+F+ L ++DP G+ PS
Sbjct: 61 TALLNDKANANWTDTQRRQRVQKAVFDHLVALVDPFHGQTKTDDESGAVVPSSNAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDVAVT 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDL I V+D++IGQAA Q++AFK++ GA+IVTK+DGHAKGGGA+SAVAAT +P++FI
Sbjct: 241 PDLTIMVLDANIGQAAEAQSRAFKEAAGYGAIIVTKLDGHAKGGGAISAVAATSTPIMFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-FT 329
GTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ EG F+
Sbjct: 301 GTGEHAADLEPFRAQPFISKLLGMGDISGLMDKMEEMQMNGGQERQQEMLKKIGEGGVFS 360
Query: 330 LR 331
+R
Sbjct: 361 IR 362
>gi|327291942|ref|XP_003230679.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Anolis carolinensis]
Length = 425
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 169/252 (67%), Positives = 209/252 (82%), Gaps = 1/252 (0%)
Query: 83 LCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRA 142
+ +++DPG ++TP KGK ++IMFVGLQGSGKTT+C+K AYY+Q+KGWK L+CADT+RA
Sbjct: 4 ILQLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSKLAYYYQRKGWKTCLICADTYRA 63
Query: 143 GAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALF 202
GAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LF
Sbjct: 64 GAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLF 123
Query: 203 EEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 262
EEM QV+ A PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSA
Sbjct: 124 EEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSA 183
Query: 263 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 322
VAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D L++K
Sbjct: 184 VAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEK 242
Query: 323 LSEGNFTLRIMF 334
L G FTLR M+
Sbjct: 243 LKHGQFTLRDMY 254
>gi|430812104|emb|CCJ30440.1| unnamed protein product [Pneumocystis jirovecii]
Length = 515
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 174/331 (52%), Positives = 244/331 (73%), Gaps = 4/331 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M+L LG IS A+ ++ +DE V N L +I ALL+ DV LV++++ +IKK +
Sbjct: 1 MILGDLGRRISTALTELIKTQTVDESV-NVMLKKICSALLENDVNVDLVQKLRESIKKKI 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ NK+RII + +F+ELCK++D + P+KG ++I+ VGLQGSGKTT+C
Sbjct: 60 EFKKTTSVANKKRIIYKTVFDELCKLVDSSSEPYKPRKGFSNIILMVGLQGSGKTTSC-- 117
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+++QKKG+K L+CADTFRAG+FDQLKQNATKAKIP++GSYTE++PV I+ EGVE FK
Sbjct: 118 LAHFYQKKGFKSCLICADTFRAGSFDQLKQNATKAKIPYFGSYTETNPVSISCEGVEKFK 177
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LFEEM Q+S A P I V+D+SIGQAA Q++AFK+SV
Sbjct: 178 KELFEIIIVDTSGRHRQEKELFEEMVQISNAIKPHQTIMVLDASIGQAAESQSRAFKESV 237
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ GA+++TKMDGHAKGGGALSA++A+K+P++FIGTGEH+ + E F F+S+LLGMGD
Sbjct: 238 NFGAILLTKMDGHAKGGGALSAISASKTPIVFIGTGEHIYDLEKFVPNSFISKLLGMGDI 297
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
GFM+ + ++Q + ++ + +G FT+R
Sbjct: 298 QGFMEHFQS-LKLEQSKDTIKNIEKGVFTIR 327
>gi|426376696|ref|XP_004055129.1| PREDICTED: signal recognition particle 54 kDa protein [Gorilla
gorilla gorilla]
Length = 502
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 243/346 (70%), Gaps = 27/346 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG------------SYTESDP 168
C+ +L + +I F SYTE DP
Sbjct: 121 --------------TCSRIILGFGIGKLDNASCFFRIVFGSFVVLLNHLSMLYSYTEMDP 166
Query: 169 VRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQA 228
V IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD+SIGQA
Sbjct: 167 VIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQA 226
Query: 229 AFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVK 288
QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +
Sbjct: 227 CEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQ 286
Query: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
PF+S+LLGMGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 287 PFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 331
>gi|343429513|emb|CBQ73086.1| probable SRP54-signal recognition particle subunit [Sporisorium
reilianum SRZ2]
Length = 637
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 184/362 (50%), Positives = 250/362 (69%), Gaps = 31/362 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ L I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLSRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP-------------------GKPS-- 93
L+D A + +R+ +Q+A+F+ L ++DP P
Sbjct: 61 TALLNDKANANWSDAQRRQRVQKAVFDHLVALVDPLHGQTKTDAESGAVVAAGNAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATN 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A
Sbjct: 181 KVNVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDAAVT 240
Query: 214 PDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFI 273
PDL I V+D++IGQAA Q++AFK + GA+IVTK+DGHAKGGGA+SAVAAT +P++FI
Sbjct: 241 PDLTIMVLDANIGQAAEAQSRAFKDAAGYGAIIVTKLDGHAKGGGAISAVAATSTPIMFI 300
Query: 274 GTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSE-GNFT 329
GTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ E G+F+
Sbjct: 301 GTGEHAADLEPFRAQPFISKLLGMGDMSGLMDKMEEMQMNGGQERQREMLKKIEEGGHFS 360
Query: 330 LR 331
+R
Sbjct: 361 IR 362
>gi|156059506|ref|XP_001595676.1| hypothetical protein SS1G_03765 [Sclerotinia sclerotiorum 1980]
gi|154701552|gb|EDO01291.1| hypothetical protein SS1G_03765 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 528
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/320 (55%), Positives = 237/320 (74%), Gaps = 5/320 (1%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
R +Q SN +DEK + + EI ALL+ADV +LV ++ +IK VN +LA NK
Sbjct: 16 RILQGSSN---LDEKAFDGMIKEICSALLEADVNVRLVGNLRKSIKASVNFKELAPAVNK 72
Query: 72 RRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWK 131
+++IQ+A+++EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K
Sbjct: 73 KKVIQKAVYDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTKLARWYQSRGFK 132
Query: 132 PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDT 191
LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FKKE ++IIVDT
Sbjct: 133 ACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFKKEKFEIIIVDT 192
Query: 192 SGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 251
SGRH+QE ALF+EM + A PD + V+D+SIGQ A Q++AFK++ GA+I+TK D
Sbjct: 193 SGRHRQEDALFQEMVDIQTAVKPDQTVMVLDASIGQQAEAQSKAFKETADFGAIIITKTD 252
Query: 252 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 311
GHA GGGA+SAVAAT +P++FIGTGEHM + E F FVS+LLGMGD G M+ + +
Sbjct: 253 GHASGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPTQFVSKLLGMGDMQGLMEHVQS-L 311
Query: 312 PMDQQPELLQKLSEGNFTLR 331
+DQ+ + ++ + EG FT+R
Sbjct: 312 KLDQK-DTMKHIVEGIFTVR 330
>gi|440299675|gb|ELP92223.1| signal recognition particle 54 kDa protein, putative [Entamoeba
invadens IP1]
Length = 490
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/331 (54%), Positives = 243/331 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG SI A+++M+ +T++DE+V+N L EI +LL DV KL+ M TNIK +
Sbjct: 1 MVLSQLGSSIVNALRKMTTSTVLDEEVINTLLKEIEASLLSEDVNPKLIAGMVTNIKSRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+ G +KRR+I+ ++F EL ++DP F PKKGK SV+M VGLQG+GKTTT TK
Sbjct: 61 NATDIPEGVDKRRLIKDSVFEELINLVDPKTEPFKPKKGKTSVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KP++VCADTFRAGA++QL+ NA +A +PF+G ESDPV+ A GV+ F+
Sbjct: 121 LALYYKNRGYKPSVVCADTFRAGAYEQLQMNAKRAGVPFFGIKDESDPVKAASAGVKVFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I+VDTSGRHKQ+ LF+EM+ V A NPD VIFVMD +IGQAAF QA+AF +V
Sbjct: 181 KEKNDIILVDTSGRHKQDTELFKEMQSVKSAINPDNVIFVMDGAIGQAAFAQAKAFHDAV 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG+V++TK+DGH+ GGGALSAVAATKSP++FIGTGE ++E E FD + FV RLLGMGD
Sbjct: 241 DVGSVVITKLDGHSNGGGALSAVAATKSPIVFIGTGEKVNEIEEFDAESFVRRLLGMGDL 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G + + +++ L EG+ T+R
Sbjct: 301 KGINKLAKDFAENPEYKTMIKHLQEGSLTVR 331
>gi|254573270|ref|XP_002493744.1| Signal recognition particle (SRP) subunit (homolog of mammalian
SRP54) [Komagataella pastoris GS115]
gi|238033543|emb|CAY71565.1| Signal recognition particle (SRP) subunit (homolog of mammalian
SRP54) [Komagataella pastoris GS115]
gi|328354432|emb|CCA40829.1| Signal recognition particle subunit SRP54 [Komagataella pastoris
CBS 7435]
Length = 518
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 174/332 (52%), Positives = 246/332 (74%), Gaps = 4/332 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ + ++D V++ L EI ALL++DV KLV +++ I+K +
Sbjct: 1 MVLADLGRRINNAVGNVTKSNVVDADVISNMLKEICNALLESDVNIKLVAQLREKIRKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ +D G NK+++IQ+ +F+EL K++D + F PKK + +VIM VGLQG+GKTTTCT
Sbjct: 61 DAED-KPGINKKKLIQKVVFDELVKLVDCNEAELFKPKKKQTNVIMMVGLQGAGKTTTCT 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y+Q++G+K +VC DTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV++ +GVE F
Sbjct: 120 KLAVYYQRRGFKVGMVCGDTFRAGAFDQLKQNATKAKIPYYGSYTETDPVKVTFDGVEEF 179
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+KE ++IIVDTSGRH+QE LFEEM Q+ +A P+ I V+D+SIGQ+A Q++AFK+S
Sbjct: 180 RKEKFEIIIVDTSGRHRQEEDLFEEMVQIGKAIKPNQTIMVLDASIGQSAESQSKAFKES 239
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
GA+I+TKMD ++KGGGALSA+AAT +PV FI TGEH+ FE F + F+S+LLG+GD
Sbjct: 240 SDFGAIIITKMDSNSKGGGALSAIAATNTPVAFIATGEHIQNFEKFSGRGFISKLLGIGD 299
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G M+ + + +D Q + ++ EG FTL+
Sbjct: 300 IEGLMEHVQS-MNLD-QGDTIKNFKEGKFTLQ 329
>gi|440463596|gb|ELQ33166.1| signal recognition particle 54 kDa protein [Magnaporthe oryzae Y34]
gi|440479190|gb|ELQ59973.1| signal recognition particle 54 kDa protein [Magnaporthe oryzae
P131]
Length = 491
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/300 (57%), Positives = 231/300 (77%), Gaps = 2/300 (0%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L EI ALL+ADV +LV +++ +IK VN +L NK+R+IQ+A+F+EL ++DP
Sbjct: 7 LKEICAALLEADVNVRLVGQLRKSIKSTVNFKELPPAVNKKRLIQKAVFDELVSLVDPHA 66
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 67 EPFKPKKGKSNVIMFVGLQGAGKTTTCTKLARHYQSRGFKACLVCADTFRAGAFDQLKQN 126
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS TE+DP +A EGV+ FKKE ++IIVDTSGRH+QE+ALF+EM + +A
Sbjct: 127 ATKAKIPYYGSLTETDPAVVAREGVDKFKKERFEVIIVDTSGRHRQESALFQEMMDIQKA 186
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVAAT +P++
Sbjct: 187 VKPDETIMVLDASIGQQAEAQAKAFKEAADFGAIIITKTDGHASGGGAISAVAATHTPIV 246
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
FIGTGEHM + E F + F+S+LLGMGD +G ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 247 FIGTGEHMLDLERFAPQQFISKLLGMGDMAGLVEHVQS-LKLDQK-DTIKHITEGIFTIR 304
>gi|402077639|gb|EJT72988.1| signal recognition particle protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 514
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 170/307 (55%), Positives = 233/307 (75%), Gaps = 2/307 (0%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
+ + + EI ALL+ADV +LV +++ +IK VN +L NK+R+IQ+A+F+EL
Sbjct: 16 RQAFDAMIKEICSALLEADVNVRLVGQLRKSIKSTVNFKELPPAVNKKRLIQKAVFDELV 75
Query: 85 KMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
+++DP F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G++ LVCADTFRAGA
Sbjct: 76 RLVDPHAEPFKPKKGKTNVIMFVGLQGAGKTTTCTKLARHYQTRGFRACLVCADTFRAGA 135
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEE 204
FDQLKQNATKAKIP+YGS TE+DP +A +GVE FKKE ++IIVDTSGRH+QE+ALF+E
Sbjct: 136 FDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFKKERFEVIIVDTSGRHRQESALFQE 195
Query: 205 MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 264
M + A PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVA
Sbjct: 196 MMDIQTAVKPDETIMVLDASIGQQAEAQAKAFKEAADFGAIIITKTDGHASGGGAISAVA 255
Query: 265 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 324
AT +P++FIGTGEHM + E F + F+S+LLGMGD +G ++ + + +DQ+ + ++ ++
Sbjct: 256 ATHTPIVFIGTGEHMLDLERFAPQQFISKLLGMGDMAGLVEHVQS-LKLDQK-DTIKHIT 313
Query: 325 EGNFTLR 331
EG FT+R
Sbjct: 314 EGIFTIR 320
>gi|363751038|ref|XP_003645736.1| hypothetical protein Ecym_3433 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889370|gb|AET38919.1| Hypothetical protein Ecym_3433 [Eremothecium cymbalariae
DBVPG#7215]
Length = 536
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 178/335 (53%), Positives = 237/335 (70%), Gaps = 5/335 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNEC-LNEITRALLQADVQFKLVREMQTNIK-- 57
MVLA LG I+ A+ Q N + V E L I ALL+ DV KLV ++ N+K
Sbjct: 1 MVLADLGKRINAAVTQALNNDKDEYAVTVELMLKSIATALLENDVNIKLVSNLRNNLKVK 60
Query: 58 --KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
+ N + + +++IQ+ +F ELC ++D ++ PKK K +VIMFVGLQGSGKT
Sbjct: 61 LLGVKNSNKDTSQAQTKKLIQKTVFEELCSLVDCETAAYQPKKKKSNVIMFVGLQGSGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE++PV++A +G
Sbjct: 121 TSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTETNPVKVAADG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
VE FKKE ++IIVDTSGRH QE ALF+EM ++SE P+ I V+D+SIGQAA Q++A
Sbjct: 181 VEKFKKEKFEIIIVDTSGRHHQEDALFQEMVEISEVVKPNSTIMVLDASIGQAAEQQSRA 240
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+S GA+++TKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ +FE F K F+S+LL
Sbjct: 241 FKESSDFGAIVLTKMDGHAKGGGAISAVAATKTPIIFIGTGEHIHDFEKFSPKSFISKLL 300
Query: 296 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G+GD +++ V + ++ + +G FTL
Sbjct: 301 GIGDIESLLEQFKTVSNKEDTKATMENIQQGKFTL 335
>gi|261202392|ref|XP_002628410.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
SLH14081]
gi|239590507|gb|EEQ73088.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
SLH14081]
Length = 530
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/332 (52%), Positives = 231/332 (69%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFTEMTQIQTAIKPDQTILVLDGTIGQAAESQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGSAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+ ++ + V E + +S G FTLR
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLR 332
>gi|239612234|gb|EEQ89221.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
ER-3]
gi|327353181|gb|EGE82038.1| signal recognition particle protein [Ajellomyces dermatitidis ATCC
18188]
Length = 533
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/332 (52%), Positives = 231/332 (69%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFTEMTQIQTAIKPDQTILVLDGTIGQAAESQSAAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGSAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+ ++ + V E + +S G FTLR
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLR 332
>gi|429861458|gb|ELA36147.1| signal recognition particle 54 kda protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 501
Score = 360 bits (924), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 172/300 (57%), Positives = 230/300 (76%), Gaps = 2/300 (0%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L EI ALL+ADV +LV +++ +IK VN DL NK+R+IQ+++F+EL K++DP
Sbjct: 2 LKEICAALLEADVNVRLVGQLRKSIKSTVNFKDLPPAVNKKRLIQKSVFDELVKLVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK ++IMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNIIMFVGLQGAGKTTTCTKLARHYQARGFKACLVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS TE+DP +A +GVE FKKE ++IIVDTSGRH+QE ALF+EM + A
Sbjct: 122 ATKAKIPYYGSLTETDPAVVARDGVEKFKKEKFEVIIVDTSGRHRQEEALFQEMVDIQTA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVAAT +P++
Sbjct: 182 IRPDETIMVLDASIGQQAESQAKAFKEAADFGAIIITKTDGHAHGGGAISAVAATHTPIV 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
FIGTGEHM + E F + FV +LLGMGD +G ++ + + + +DQ+ + ++ ++EG FT+R
Sbjct: 242 FIGTGEHMLDLERFAPQQFVQKLLGMGDMAGLVEHV-QSLKLDQK-DTIKHITEGIFTVR 299
>gi|240277685|gb|EER41193.1| signal recognition particle protein [Ajellomyces capsulatus H143]
gi|325093770|gb|EGC47080.1| signal recognition particle protein SRP54 [Ajellomyces capsulatus
H88]
Length = 527
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/332 (52%), Positives = 231/332 (69%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTAIKPDQTILVLDGTIGQAAESQSAAFKAAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+ ++ + V E + +S G FTLR
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLR 332
>gi|397643867|gb|EJK76129.1| hypothetical protein THAOC_02125 [Thalassiosira oceanica]
Length = 635
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/345 (49%), Positives = 254/345 (73%), Gaps = 11/345 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNAT---IIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK 57
MVLA+LGG + ++ ++ I + L+ L +I AL ++DV+ +LV +++ NI+
Sbjct: 1 MVLAELGGKLRSSLHRLQGGRGDDAITTETLDAVLRDIGEALAESDVRAELVTDLKDNIR 60
Query: 58 K----IVNLDDLAAGHNKRRIIQQAIFNELCKMLDP-GKPSFTP---KKGKPSVIMFVGL 109
+ V+ + ++ N R +Q+A+ +EL ML P G+ S P ++G+P+VI+FVGL
Sbjct: 61 RKVGDAVSENTASSNANLARQVQRAVVDELTSMLTPSGEGSAKPYVMRRGRPNVILFVGL 120
Query: 110 QGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
QG+GKTT+ K+A+++ ++GWK A+VCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV
Sbjct: 121 QGAGKTTSIAKFAHHYLRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPV 180
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAA 229
IA EGV+ F ++ ++IIVDTSGRH+QE LFEEM+++S A NP IFVMD++ GQA
Sbjct: 181 SIAEEGVDRFVQDGYEVIIVDTSGRHRQEEGLFEEMQEISAAVNPSNTIFVMDATQGQAV 240
Query: 230 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
+DQA+AF +V+VG+VIVTK+DGHA+GGGA+SAVAAT SP++F+G+GE ++ E F+ +
Sbjct: 241 YDQARAFHSAVNVGSVIVTKLDGHARGGGAISAVAATGSPIVFLGSGERFEDLEAFNAQS 300
Query: 290 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
FVS+LLG GD GFM++I + + E+++ +++G FTLR ++
Sbjct: 301 FVSKLLGFGDMRGFMEEIKSLNSGKDREEMMKNMAKGQFTLRDLY 345
>gi|154285458|ref|XP_001543524.1| hypothetical protein HCAG_00570 [Ajellomyces capsulatus NAm1]
gi|150407165|gb|EDN02706.1| hypothetical protein HCAG_00570 [Ajellomyces capsulatus NAm1]
Length = 353
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/332 (52%), Positives = 231/332 (69%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTAIQPDQTILVLDGTIGQAAESQSAAFKAAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+ ++ + V E + +S G FTLR
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLR 332
>gi|225557139|gb|EEH05426.1| signal recognition particle protein SRP54 [Ajellomyces capsulatus
G186AR]
Length = 527
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/332 (52%), Positives = 231/332 (69%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQE LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTAIKPDQTILVLDGTIGQAAESQSAAFKAAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+ ++ + V E + +S G FTLR
Sbjct: 301 ASLVEHVQAVTKDSATAKETYKHISAGIFTLR 332
>gi|331223009|ref|XP_003324178.1| signal recognition particle subunit SRP54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309303168|gb|EFP79759.1| signal recognition particle subunit SRP54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 635
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 244/352 (69%), Gaps = 21/352 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A ++ +ID+K L+ L I+ ALL +DV LV ++ +K +
Sbjct: 1 MVLADLGKKINAAFSELQRTPLIDDKALDLLLKGISAALLSSDVNVTLVANLRNRVKSKL 60
Query: 61 N--LDDLAAGHNKRR-IIQQAIFNELCKMLDPGK---------------PSFTPKKGKPS 102
+ L+ L K++ ++ + +F+EL ++ P + PKKGKP+
Sbjct: 61 SPQLEKLIQSPAKQKQLVHKTVFDELVALVSPTGSASDHASSSSRTTEYTPWQPKKGKPN 120
Query: 103 VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS 162
VIMFVGLQGSGKTT+CTK A Y+++KG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGS
Sbjct: 121 VIMFVGLQGSGKTTSCTKLAVYYRRKGFKTALVCADTFRAGAFDQLKQNATKAKIPFYGS 180
Query: 163 YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMD 222
+TE+DP+ I+ GV FK+E ++IIVDTSGRH+QE LFEEM+Q+S P+L I V+D
Sbjct: 181 HTETDPIAISTAGVTRFKRERFEVIIVDTSGRHRQETELFEEMKQISAGVTPNLTIMVLD 240
Query: 223 SSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEF 282
+IGQAA Q +AFK++ GA+IVTKMDGHAKGGGA+SAVAA ++P++FIGTGEH+ +
Sbjct: 241 GAIGQAAEAQTRAFKEAADFGAIIVTKMDGHAKGGGAISAVAAAQTPIMFIGTGEHLHDL 300
Query: 283 EVFDVKPFVSRLLGMGDWSGFMDKIHEV---VPMDQQPELLQKLSEGNFTLR 331
E F +PF+S+LLGMGD F++ + ++ P + E+ Q++ G FT+R
Sbjct: 301 ERFAPEPFISKLLGMGDIGEFLETMQDLQSATPSQNREEMRQRIERGVFTIR 352
>gi|50306973|ref|XP_453464.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642598|emb|CAH00560.1| KLLA0D09020p [Kluyveromyces lactis]
Length = 530
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 238/336 (70%), Gaps = 6/336 (1%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN E + L EI ALL+ DV +LV ++ NIK
Sbjct: 1 MVLADLGKRINNAVTNAISNEQTDYETTVQSMLKEIATALLENDVNIRLVSRLRENIKNT 60
Query: 60 V----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGK 114
+ N++ +++IQ+ +F+ELC ++D S F PKK + +VIMFVGLQGSGK
Sbjct: 61 LLSNANVNAKFTNAQTKKLIQKTVFDELCNLVDCEVTSPFQPKKRQSNVIMFVGLQGSGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE +PV++A +
Sbjct: 121 TTSCTKLAVYYSKRGYKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTEPNPVKVAKD 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
GV+ FKKE ++IIVDTSGRH+QE +LF+EM ++S+A P I V+D+SIGQAA Q++
Sbjct: 181 GVDKFKKEKFEIIIVDTSGRHQQEDSLFQEMVEISQAVKPKQTIMVLDASIGQAAEHQSK 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK+S G++I+TKMDGHA+GGGA+SAVA+T +P+IFIGTGEH+ +FE F K FVS+L
Sbjct: 241 AFKESADFGSIILTKMDGHARGGGAISAVASTNTPIIFIGTGEHIHDFEKFSPKSFVSKL 300
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
LG+GD M++ V D L+ + +G FTL
Sbjct: 301 LGIGDIESLMERFQTVSDQDDAKNTLENIQQGKFTL 336
>gi|302506196|ref|XP_003015055.1| hypothetical protein ARB_06815 [Arthroderma benhamiae CBS 112371]
gi|291178626|gb|EFE34415.1| hypothetical protein ARB_06815 [Arthroderma benhamiae CBS 112371]
Length = 504
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/301 (57%), Positives = 221/301 (73%), Gaps = 1/301 (0%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV++++ +IK V L + NK+R+IQ+A+F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQQLRKSIKAAVQLPSIPPAVNKKRLIQKAVFDQLVALVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIM VGLQG+GKTTTCTK A ++Q KG+K ALVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNVIMMVGLQGAGKTTTCTKLARHYQTKGFKAALVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV ++ EGV FKKE D+IIVDTSGRH+QE LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVSSEGVAKFKKERFDIIIVDTSGRHRQEEDLFAEMTQIQSA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+DS+IGQAA Q+ AFK + GA+I+TK DGHA GGGA+SAVAAT++P+I
Sbjct: 182 IKPDQTIMVLDSTIGQAAETQSAAFKSAADFGAIIITKTDGHAAGGGAISAVAATRTPII 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTL 330
F+GTGEHM + E F +PFV +LLGMGD + ++ + V E + +SEG FTL
Sbjct: 242 FLGTGEHMLDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTL 301
Query: 331 R 331
R
Sbjct: 302 R 302
>gi|50555115|ref|XP_504966.1| YALI0F03839p [Yarrowia lipolytica]
gi|54042305|sp|Q99150.2|SRP54_YARLI RecName: Full=Signal recognition particle 54 kDa protein homolog;
Short=SRP54
gi|49650836|emb|CAG77773.1| YALI0F03839p [Yarrowia lipolytica CLIB122]
Length = 536
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 241/335 (71%), Gaps = 10/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A +S IDE L+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLEDLGKRINGAFANLSKGGDIDE-ALDAMLKEVCSALLESDVNIKLVSQLRQKVKNSV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPS---FTPKKGKPSVIMFVGLQGSGKT 115
G +K+++IQ+A+F+EL ++ D S F P+KGK +V+MFVGLQGSGKT
Sbjct: 60 KA--TPNGASKKKVIQKALFDELVNLVGVDESAASAAKFKPQKGKSNVVMFVGLQGSGKT 117
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+Q++G+K LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV +A EG
Sbjct: 118 TSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVAVAAEG 177
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRH+QE+ LF EM + A PD I V+D+SIGQAA Q++A
Sbjct: 178 VAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIGAAVKPDSTIMVLDASIGQAAEPQSRA 237
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK + G++I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S+LL
Sbjct: 238 FKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFISKLL 297
Query: 296 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G+GD G M+ + + +DQ+ + ++ + EG FTL
Sbjct: 298 GIGDLQGLMETMQS-LNLDQK-KTMEHIQEGIFTL 330
>gi|1147795|gb|AAC49735.1| Srp54p [Yarrowia lipolytica]
Length = 536
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 241/335 (71%), Gaps = 10/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A +S IDE L+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLEDLGKRINGAFANLSKGGDIDE-ALDAMLKEVCSALLESDVNIKLVSQLRQKVKNSV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPS---FTPKKGKPSVIMFVGLQGSGKT 115
G +K+++IQ+A+F+EL ++ D S F P+KGK +V+MFVGLQGSGKT
Sbjct: 60 KA--TPNGASKKKVIQKALFDELVNLVGVDESAASAAKFKPQKGKSNVVMFVGLQGSGKT 117
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+Q++G+K LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV +A EG
Sbjct: 118 TSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVAVAAEG 177
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FKKE ++IIVDTSGRH+QE+ LF EM + A PD I V+D+SIGQAA Q++A
Sbjct: 178 VAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIGAAVKPDSTIMVLDASIGQAAEPQSRA 237
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK + G++I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S+LL
Sbjct: 238 FKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFISKLL 297
Query: 296 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G+GD G M+ + + +DQ+ + ++ + EG FTL
Sbjct: 298 GIGDLQGLMETMQS-LNLDQK-KTMEHIQEGIFTL 330
>gi|366998227|ref|XP_003683850.1| hypothetical protein TPHA_0A03390 [Tetrapisispora phaffii CBS 4417]
gi|357522145|emb|CCE61416.1| hypothetical protein TPHA_0A03390 [Tetrapisispora phaffii CBS 4417]
Length = 537
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/340 (52%), Positives = 243/340 (71%), Gaps = 11/340 (3%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV +LV ++++NIK
Sbjct: 1 MVLADLGKRINGAVNSALSNTQDDYVTSVDNMLKMICTALLESDVNIQLVSKLRSNIKST 60
Query: 60 VNLDDLAAGHNK-------RRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQ 110
+ +D L G +K +++IQ+++F+ELC ++D F PKK K +VIMFVGLQ
Sbjct: 61 L-MDALKTGGSKSTSNAQTKKLIQKSVFDELCNLVDFENNDNVFLPKKKKTNVIMFVGLQ 119
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA IPFYGSY+E++PV+
Sbjct: 120 GSGKTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYSEANPVK 179
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
+A EG+E FKKE ++IIVDTSGRH+QE ALF+EM ++S P+ I V+D+SIGQAA
Sbjct: 180 VAGEGIEKFKKEKFEVIIVDTSGRHRQEEALFQEMVEISNVVKPNQTIMVLDASIGQAAE 239
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F
Sbjct: 240 QQSKAFKESADFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLERFSPKSF 299
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
VS+LLG+GD G +++ V + ++ + +G FTL
Sbjct: 300 VSKLLGIGDIEGLLEQFQTVSNSEDTKATMENIQQGKFTL 339
>gi|367012263|ref|XP_003680632.1| hypothetical protein TDEL_0C05320 [Torulaspora delbrueckii]
gi|359748291|emb|CCE91421.1| hypothetical protein TDEL_0C05320 [Torulaspora delbrueckii]
Length = 527
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/338 (52%), Positives = 241/338 (71%), Gaps = 10/338 (2%)
Query: 1 MVLAQLGGSISRAIQ-QMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV KLV +++ N+K
Sbjct: 1 MVLADLGKRINSAVNGALSNTQDDYATTVDSMLKAIVTALLESDVNIKLVSKLRNNLKTK 60
Query: 60 VNLDDLAAGHNK-----RRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQGS 112
+ LD A+G + +++IQ+A+F+ELC ++D G+P F PKK K +VIMFVGLQGS
Sbjct: 61 L-LDSKASGRSTSNGQVKKLIQKAVFDELCDLVDCQTGEP-FQPKKKKTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ ++G+K LVCADTFRAGAFDQLKQNA KA IPFYGSYTE++PV++A
Sbjct: 119 GKTTSCTKLAVYYARRGFKVGLVCADTFRAGAFDQLKQNAIKANIPFYGSYTETNPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EGV FKKE ++IIVDTSGRH QE ALF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 179 AEGVAKFKKEKFEVIIVDTSGRHHQEEALFQEMVEISSVVKPNQTIMVLDASIGQAAEQQ 238
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K FVS
Sbjct: 239 SRAFKESADFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFVS 298
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ + +G FTL
Sbjct: 299 KLLGIGDIESLLEQFQTVSNKEDTKATMENIQQGKFTL 336
>gi|328861050|gb|EGG10154.1| hypothetical protein MELLADRAFT_115576 [Melampsora larici-populina
98AG31]
Length = 617
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/349 (50%), Positives = 248/349 (71%), Gaps = 18/349 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A + +IDEK ++ L + ALL +DV LV ++ +K V
Sbjct: 1 MVLADLGKKINAAFADLQRTPLIDEKAVDSLLKGLATALLGSDVNVGLVSNLRNRVKSKV 60
Query: 61 N--LDDLAAGHNKRR-IIQQAIFNELCKMLDPGKPS------------FTPKKGKPSVIM 105
L+ L + K++ ++Q+ +++EL +++P S + PKKGKP+VIM
Sbjct: 61 TPQLEKLISSPAKQKQLVQKTVYDELVALVNPTAASSDATSSSSLALPWQPKKGKPNVIM 120
Query: 106 FVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE 165
FVGLQGSGKTT+CTK A Y+Q+KG++ ALVCADTFRAGAFDQLKQNA +AK+PF+GS+TE
Sbjct: 121 FVGLQGSGKTTSCTKLAVYYQRKGFRTALVCADTFRAGAFDQLKQNAARAKVPFFGSHTE 180
Query: 166 SDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSI 225
+DP+RI+ GV FK+E ++IIVDTSGRH+QE LFEEM+Q+S A P+L I V+D +I
Sbjct: 181 TDPIRISAAGVTKFKRERFEVIIVDTSGRHRQETELFEEMKQISSAVQPNLTIMVLDGAI 240
Query: 226 GQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVF 285
GQAA Q +AFK++ GA+IVTKMDGHAKGGGA+SAVAAT++P++FIGTGEH+ + E F
Sbjct: 241 GQAAEAQTRAFKEAAGFGAIIVTKMDGHAKGGGAISAVAATQTPIMFIGTGEHIHDLERF 300
Query: 286 DVKPFVSRLLGMGDWSGFMDKIHEV---VPMDQQPELLQKLSEGNFTLR 331
PF+S++LGM D GF++K+ ++ P ++ E+ +++ G FTLR
Sbjct: 301 SPGPFISKVLGMADVDGFLEKMQDLQQSTPAHKREEMRERMERGEFTLR 349
>gi|365982761|ref|XP_003668214.1| hypothetical protein NDAI_0A08170 [Naumovozyma dairenensis CBS 421]
gi|343766980|emb|CCD22971.1| hypothetical protein NDAI_0A08170 [Naumovozyma dairenensis CBS 421]
Length = 539
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/337 (53%), Positives = 239/337 (70%), Gaps = 7/337 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV LV ++++NIK
Sbjct: 1 MVLADLGKRINGAVNNALSNTEDDYTTTVDSMLKGIVTALLESDVNIALVSKVRSNIKSK 60
Query: 60 VNLDDLAAGHN-----KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSG 113
+ ++ AA + +++IQ+ +F+ELC ++D K FTPKK K +VIMFVGLQGSG
Sbjct: 61 LLSENNAANRSVSNGQTKKLIQKTVFDELCNLVDCEVKEPFTPKKKKSNVIMFVGLQGSG 120
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++
Sbjct: 121 KTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVVE 180
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQA 233
EG+ FKKE ++IIVDTSGRH+QE LF+EM Q+S P+ I V+D+SIGQAA Q+
Sbjct: 181 EGITKFKKEKFEIIIVDTSGRHRQEEELFQEMIQISNVVKPNQTIMVLDASIGQAAEQQS 240
Query: 234 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 293
+AFK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS+
Sbjct: 241 KAFKDSSDFGAIILTKMDGHAKGGGAISAVAATHTPIIFIGTGEHIHDFEKFSPKSFVSK 300
Query: 294 LLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 LLGIGDIESLFEQLQTVSNKEDTQATMENIQKGKFTL 337
>gi|302408571|ref|XP_003002120.1| signal recognition particle 54 kDa protein [Verticillium albo-atrum
VaMs.102]
gi|261359041|gb|EEY21469.1| signal recognition particle 54 kDa protein [Verticillium albo-atrum
VaMs.102]
Length = 518
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/331 (53%), Positives = 237/331 (71%), Gaps = 10/331 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + ++DV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSDLTRAPNLDEKR--------SAPPPRSDVNVRLVGQLRKSIKSTV 52
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+ +F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 53 NFKDLPPAVNKKRLIQKTVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 112
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 113 LARHYQARGLKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 172
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM + A PD I V+D+SIGQ A QA+AFK++
Sbjct: 173 KERFEVIIVDTSGRHRQEENLFQEMVDIQAAIKPDETIMVLDASIGQQAESQAKAFKEAA 232
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 233 DFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVQKLLGMGDM 292
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
+ ++ + + +DQ+ + ++ ++EG FT+R
Sbjct: 293 ASLVEHVQS-LKLDQK-DTMKHITEGIFTVR 321
>gi|302654843|ref|XP_003019220.1| hypothetical protein TRV_06769 [Trichophyton verrucosum HKI 0517]
gi|291182928|gb|EFE38575.1| hypothetical protein TRV_06769 [Trichophyton verrucosum HKI 0517]
Length = 504
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 220/301 (73%), Gaps = 1/301 (0%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV++++ +IK V L + NK+R+IQ+A+F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQQLRKSIKAAVQLPSIPPAVNKKRLIQKAVFDQLVALVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIM VGLQG+GKTTTCTK A ++Q KG+K ALVCADT RAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNVIMMVGLQGAGKTTTCTKLARHYQTKGFKAALVCADTLRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV ++ EGV FKKE D+IIVDTSGRH+QE LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVSSEGVAKFKKERFDIIIVDTSGRHRQEEDLFAEMTQIQSA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+DS+IGQAA Q+ AFK + GA+I+TK DGHA GGGA+SAVAAT++P+I
Sbjct: 182 IKPDQTIMVLDSTIGQAAETQSAAFKSAADFGAIIITKTDGHAAGGGAISAVAATRTPII 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTL 330
F+GTGEHM + E F +PFV +LLGMGD + ++ + V E + +SEG FTL
Sbjct: 242 FLGTGEHMLDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTL 301
Query: 331 R 331
R
Sbjct: 302 R 302
>gi|255716822|ref|XP_002554692.1| KLTH0F11374p [Lachancea thermotolerans]
gi|238936075|emb|CAR24255.1| KLTH0F11374p [Lachancea thermotolerans CBS 6340]
Length = 534
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 174/333 (52%), Positives = 240/333 (72%), Gaps = 3/333 (0%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-K 58
MVLA LG I+ A+ +SN+ ++ L I ALL++DV KLV ++ NI+ K
Sbjct: 1 MVLADLGKRINSAVNSALSNSQDDYVTTVDVMLKTIVTALLESDVNIKLVFSLRNNIRAK 60
Query: 59 IVNLDDLAAGHNK-RRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
++++ + + + +++IQ+ +F+ELC ++D F PKK K +VIMFVGLQGSGKTT+
Sbjct: 61 LLDVKSRSTNNAQTKKLIQKTVFDELCNLVDGETEPFQPKKRKQNVIMFVGLQGSGKTTS 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE++PV++A EGV
Sbjct: 121 CTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETNPVKVAAEGVA 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKKE ++IIVDTSGRH+QE LF+EM ++S+ P+ I V+D+SIGQAA Q++AFK
Sbjct: 181 KFKKEKFEVIIVDTSGRHRQEEELFQEMVEISQVVKPNQTIMVLDASIGQAAEQQSKAFK 240
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
S GA+I+TKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ +FE F K F+S+LLG+
Sbjct: 241 DSSDFGAIILTKMDGHAKGGGAISAVAATKTPIIFIGTGEHVHDFEKFSPKSFISKLLGI 300
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
GD ++ + + ++ + +G FTL
Sbjct: 301 GDIESLLEHFQTLSNKEDTKATMENIQQGKFTL 333
>gi|407926155|gb|EKG19125.1| Signal recognition particle SRP54 subunit GTPase [Macrophomina
phaseolina MS6]
Length = 525
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 245/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + + EI AL++ADV KLV ++ +I+K V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKDFDRMVKEICNALVEADVNIKLVAGLRASIRKAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+A G NK+R+IQ+A+F+EL K++DP F P+KGK +VIMFVGLQGSGKTT+CTK
Sbjct: 61 NFKDIAPGVNKKRLIQKAVFDELVKLVDPHSEPFKPRKGKSNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGVE FK
Sbjct: 121 LARWYSARGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVAVAKEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ +A P I V+DSSIGQAA QA+AFK+S
Sbjct: 181 KERFEIIIVDTSGRHRQEQDLFDEMIQIQQAVEPHQTIMVLDSSIGQAAESQARAFKESA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
G++I+TK DG A GGGA+SA AAT P+ F+GTGEHM +FE FD + FV +LLGMGD
Sbjct: 241 DFGSIILTKTDGAAAGGGAISATAATHCPIAFLGTGEHMLDFEKFDPQRFVGKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ E ++ + EG FT+R
Sbjct: 301 QGLVEHVQS-LKLDQK-ETMKHIQEGIFTIR 329
>gi|156844088|ref|XP_001645108.1| hypothetical protein Kpol_538p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156115765|gb|EDO17250.1| hypothetical protein Kpol_538p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 577
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/340 (52%), Positives = 238/340 (70%), Gaps = 10/340 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-K 58
MVLA LG I+ A+ +SN ++ L I ALL+ADV +LV +++ NIK K
Sbjct: 1 MVLADLGKRINSAVNSALSNTQDDYATAVDILLKNIVTALLEADVNIQLVSKLRANIKAK 60
Query: 59 IVN-----LDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQ 110
+++ + + +++IQ+ +F+ELC ++D + F PKK K ++IMFVGLQ
Sbjct: 61 LLDQNSNNNNQTSKSGQTKKLIQKTVFDELCNLVDGNTDQQQQFIPKKRKTNIIMFVGLQ 120
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA IPFYGSYTE+DPVR
Sbjct: 121 GSGKTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYTEADPVR 180
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
+A EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+SIGQAA
Sbjct: 181 VASEGIAKFKKEKFDIIIVDTSGRHRQEEQLFQEMIEISNEIKPNQTIMVLDASIGQAAE 240
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
Q++AFK+S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F
Sbjct: 241 QQSKAFKESSDFGAIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSF 300
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
VS+LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 VSKLLGIGDIESLFEQLQTVSNKEDTKATMENIQQGKFTL 340
>gi|302306335|ref|NP_982582.2| AAR041Wp [Ashbya gossypii ATCC 10895]
gi|299788468|gb|AAS50406.2| AAR041Wp [Ashbya gossypii ATCC 10895]
gi|374105781|gb|AEY94692.1| FAAR041Wp [Ashbya gossypii FDAG1]
Length = 514
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 175/334 (52%), Positives = 235/334 (70%), Gaps = 4/334 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKV-LNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ Q N D + L I ALL+ DV KLV +++NIK
Sbjct: 1 MVLADLGKRINAAVAQALNNDTDDYVAGVETMLKAIVTALLENDVNIKLVSSVRSNIKAR 60
Query: 60 VNLDDLAAGHNK---RRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ D + ++++Q+ +F ELC ++D ++ PKK K +V+MFVGLQG+GKTT
Sbjct: 61 LLADKSGRRMGQAQTKQLVQKTVFEELCALVDCQTAAYQPKKKKSNVVMFVGLQGAGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE++PVR+A +GV
Sbjct: 121 SCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTETNPVRVAADGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
FKKE ++IIVDTSGRH QE ALF+EM ++++ P+ I V+D+SIGQAA Q++AF
Sbjct: 181 AKFKKERFEIIIVDTSGRHHQEDALFQEMVEIAQEVKPNQTIMVLDASIGQAAEQQSRAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
K++ GA+I+TKMDGHAKGGGA+SAVAATK+PVIFIGTGEH+ +FE F K FVS+LLG
Sbjct: 241 KEAADFGAIILTKMDGHAKGGGAISAVAATKTPVIFIGTGEHVHDFEKFSPKSFVSKLLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+GD +++ V + ++ + +G FTL
Sbjct: 301 IGDIESLLEQFQTVSNKEDTKATMENIQQGRFTL 334
>gi|444321446|ref|XP_004181379.1| hypothetical protein TBLA_0F03220 [Tetrapisispora blattae CBS 6284]
gi|387514423|emb|CCH61860.1| hypothetical protein TBLA_0F03220 [Tetrapisispora blattae CBS 6284]
Length = 536
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 176/336 (52%), Positives = 234/336 (69%), Gaps = 6/336 (1%)
Query: 1 MVLAQLGGSISRAIQ-QMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN+ ++ L I ALL++DV KLV +M+ NIK
Sbjct: 1 MVLADLGKRINNAVNGALSNSKDDYTTTVDIMLKTIVTALLESDVNIKLVSQMRNNIKSK 60
Query: 60 VNLDDLAAGH----NKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGK 114
+ A+ +++IQ+ +F+ELC ++D F PKK + +VIMFVGLQGSGK
Sbjct: 61 LMESKTASSSVTNAQTKKLIQETVFDELCNLVDYKSDQPFQPKKRQTNVIMFVGLQGSGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA IPF+GSYTE+DPV++A E
Sbjct: 121 TTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFFGSYTEADPVKVAAE 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
G+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+SIGQAA Q++
Sbjct: 181 GIAKFKKEKFDIIIVDTSGRHRQEEELFKEMVEISNVVKPNQTIMVLDASIGQAAEQQSK 240
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AFK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS+L
Sbjct: 241 AFKDSSDFGAIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDFEKFSPKSFVSKL 300
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
LG+GD +++ V + ++ + +G FTL
Sbjct: 301 LGIGDIESLLEQFQTVSNKEDTKATMENIQQGKFTL 336
>gi|410084092|ref|XP_003959623.1| hypothetical protein KAFR_0K01340 [Kazachstania africana CBS 2517]
gi|372466215|emb|CCF60488.1| hypothetical protein KAFR_0K01340 [Kazachstania africana CBS 2517]
Length = 528
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 172/338 (50%), Positives = 238/338 (70%), Gaps = 9/338 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +S+A ++ L IT ALL++DV +LV ++ NIK
Sbjct: 1 MVLADLGKRINSAVNNALSSAQSDYSTTIDNMLKAITTALLESDVNIQLVSRLRNNIKSK 60
Query: 60 V-----NLDDLAAGHNKRRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQGS 112
+ N ++ G K+ +IQ+ +++ELC ++D G+ F PKK + ++IMFVGLQGS
Sbjct: 61 LMESKGNTKSVSNGQTKK-LIQKTVYDELCALVDCNDGQEPFRPKKKQSNIIMFVGLQGS 119
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 120 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVA 179
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE ++IIVDTSGRH QE +LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 180 AEGIAKFKKEKFEIIIVDTSGRHHQEESLFQEMVEISRVVKPNQTIMVLDASIGQAAEQQ 239
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F + F+S
Sbjct: 240 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPQSFIS 299
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD + + V + ++ + +G FTL
Sbjct: 300 KLLGIGDMESLFETLQTVTNKEDTKATMENIQQGKFTL 337
>gi|451854034|gb|EMD67327.1| hypothetical protein COCSADRAFT_83661 [Cochliobolus sativus ND90Pr]
Length = 543
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 179/331 (54%), Positives = 248/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDSMVKEISNALVEADVNVKLVMNLRQSIKRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ A PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQTAVTPDQTIMVLDGTIGQAAESQARAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 241 DFGAIVITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ +++G FT++
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIK 329
>gi|451999951|gb|EMD92413.1| hypothetical protein COCHEDRAFT_1193900 [Cochliobolus
heterostrophus C5]
Length = 540
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 179/331 (54%), Positives = 248/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDSMVKEISNALVEADVNVKLVMNLRQSIKRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ A PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQTAVTPDQTIMVLDGTIGQAAESQARAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 241 DFGAIVITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ +++G FT++
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIK 329
>gi|378727694|gb|EHY54153.1| signal recognition particle protein [Exophiala dermatitidis
NIH/UT8656]
Length = 526
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/337 (54%), Positives = 244/337 (72%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A+ ++ +DEK + + EI ALL ADV +LV+ ++ +I+ V
Sbjct: 1 MVLSDLGRRINAAVSNLNREPNLDEKAFDAMIKEICSALLAADVNVRLVKNLRKSIQSTV 60
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
N DL + ++K+R+IQQA+F+ L +++DP + PKKGK +VIMFVGLQG+GKTTT
Sbjct: 61 NFKDLPPQTSSNSKKRLIQQAVFDHLVQLVDPHAEPYKPKKGKSNVIMFVGLQGAGKTTT 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A Y+ ++G+K LVCADTFRAGA+DQLKQNATKAKIP+YGS T++DP +A EGV
Sbjct: 121 CTKLARYYAQRGFKACLVCADTFRAGAYDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVA 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
FKKE ++IIVDTSGRHKQEA LFEEM QV +A PD I V+D +IGQAA Q+ AFK
Sbjct: 181 RFKKEKFEIIIVDTSGRHKQEADLFEEMIQVQKAIKPDQTIMVLDGTIGQAAEAQSSAFK 240
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++ GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+S+LLG
Sbjct: 241 EAADFGAIIITKTDGGAAGGGAISAVAATHTPIIFLGTGEHMMDLERFAPKPFISKLLGY 300
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQK-LSEGNFTLRIM 333
GD SG +++I + + QK L+EG FTLR M
Sbjct: 301 GDMSGLIEQIQSITRESAGMKETQKHLAEGIFTLRDM 337
>gi|169624365|ref|XP_001805588.1| hypothetical protein SNOG_15441 [Phaeosphaeria nodorum SN15]
gi|160705155|gb|EAT77106.2| hypothetical protein SNOG_15441 [Phaeosphaeria nodorum SN15]
Length = 533
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/331 (54%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSPNLDEKAFEAMVKEISNALVEADVNVKLVMNLRQSIKRSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFKHLAPNVNKKRVIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP++GS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYFGSHTQTDPVIVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ A PD I V+D++IGQAA QA+AFK +
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQNAVQPDQTIMVLDATIGQAAEGQARAFKDAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG A GGGA+SAVAAT +P++FIG GEHM + E F +PFVS+LLGMGD
Sbjct: 241 DFGAIVITKTDGAAAGGGAISAVAATHTPIVFIGNGEHMLDLERFSPEPFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ +++G FT++
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIK 329
>gi|254580797|ref|XP_002496384.1| ZYRO0C17138p [Zygosaccharomyces rouxii]
gi|238939275|emb|CAR27451.1| ZYRO0C17138p [Zygosaccharomyces rouxii]
Length = 536
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 236/338 (69%), Gaps = 10/338 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV KLV +++ N++
Sbjct: 1 MVLADLGKRINTAVNSALSNTQDDYATTVDVMLKTIVTALLESDVNIKLVSKLRNNLR-- 58
Query: 60 VNLDDLAAGHNK------RRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGS 112
+ L D +G+ +++IQ+ +F ELC ++D + F PKK K +VIMFVGLQGS
Sbjct: 59 IKLLDSKSGNKSTTNAQTKKLIQKTVFEELCDLVDCKSEQPFQPKKKKTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ ++G+K LVCADTFRAGAFDQLKQNA KA IPFYGSY E+DPV++A
Sbjct: 119 GKTTSCTKLAVYYSRRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYVETDPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE ++IIVDTSGRH QE ALF+EM ++S NP+ I V+D+SIGQAA Q
Sbjct: 179 AEGIAKFKKEKFEVIIVDTSGRHHQEEALFQEMVEISTVVNPNQTIMVLDASIGQAAEQQ 238
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK++ GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 239 SKAFKETADFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLERFSPKSFIS 298
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ L +G FTL
Sbjct: 299 KLLGIGDIESLLEQFQTVSNTEDTKATMENLQQGKFTL 336
>gi|290977140|ref|XP_002671296.1| predicted protein [Naegleria gruberi]
gi|284084864|gb|EFC38552.1| predicted protein [Naegleria gruberi]
Length = 454
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/333 (51%), Positives = 231/333 (69%), Gaps = 20/333 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ +++ +ID+ ++E L EI +L+ ADV + V +++ IK +
Sbjct: 1 MVLAELGSRITTALRTINSQAVIDDAAISELLKEIGNSLMAADVNIQQVIQLRNGIKAGL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + L G N+R I+ ++ EL +GLQG+GKTTTCTK
Sbjct: 61 DFEKLPKGINRRNHIKAVVYQEL--------------------FFEIGLQGAGKTTTCTK 100
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y+QKKG++ ALVCADTFRAGA +QL+QNA K +I FYG E++PV+IA +GVE FK
Sbjct: 101 YARYYQKKGFRSALVCADTFRAGALEQLRQNAAKVQIAFYGDEYETNPVKIAKDGVEQFK 160
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E ++IIVDTSGRH QE +LFEEM QVS+A NPD VIFVMDSSIGQ+ +QA AFK V
Sbjct: 161 NEKYEVIIVDTSGRHMQEESLFEEMEQVSQAVNPDEVIFVMDSSIGQSVKEQAAAFKSRV 220
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
SVG+VIVTK+DGHAKGGGALSAVAATKSP+ FIGTGE D F+ F+ + FVSRLLG GD
Sbjct: 221 SVGSVIVTKLDGHAKGGGALSAVAATKSPITFIGTGEDFDNFQQFNAESFVSRLLGQGDL 280
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
+ + E V +QP++ +++G +T+R M
Sbjct: 281 KTLLTTVQEAVDPTKQPQMFDNIAKGIYTIRDM 313
>gi|443926065|gb|ELU44808.1| signal recognition particle protein [Rhizoctonia solani AG-1 IA]
Length = 597
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 172/345 (49%), Positives = 240/345 (69%), Gaps = 15/345 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A Q+ A ++D+KVL+ L ++ ALL++DV KLV ++ +K
Sbjct: 1 MVLADLGRKLNDAFAQLQRAPVVDDKVLDAILKDVCSALLESDVNVKLVASLRQKVKATA 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ ++Q+A+F+EL +++DPG + P KGK +VIM VGLQG+GKT
Sbjct: 61 KAAFEGGADKGKEANRKGVVQKAVFDELVRLVDPGVEPYKPVKGKSNVIMAVGLQGNGKT 120
Query: 116 TTCTKYA----YYHQK--KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
TTCTK H K P + DTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV
Sbjct: 121 TTCTKARTPSHLTHSKLPHTHSPKNIACDTFRAGAFDQTRQSATKAKVAYFGSYTETDPV 180
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAA 229
IA +GV FKKE D+IIVDTSGRH+QEA LF+EM Q+ EA PD+ + V+D+SIGQAA
Sbjct: 181 AIASQGVAKFKKERFDVIIVDTSGRHRQEAELFQEMVQIGEAVTPDMTVLVLDASIGQAA 240
Query: 230 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Q++AFK+S + GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +P
Sbjct: 241 EAQSRAFKESSNFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLTDLDKFSPQP 300
Query: 290 FVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGNFTLR 331
F+S++LGMGD G M+ I ++ P D+ E+ +KL EG ++R
Sbjct: 301 FISKMLGMGDMQGLMETIQDMAMSNP-DKHKEMAKKLEEGKLSIR 344
>gi|403214075|emb|CCK68576.1| hypothetical protein KNAG_0B01290 [Kazachstania naganishii CBS
8797]
Length = 537
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 174/338 (51%), Positives = 235/338 (69%), Gaps = 10/338 (2%)
Query: 1 MVLAQLGGSISRAIQQM-SNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG ++ A+ SN ++ L I ALL++DV LV ++ NI+
Sbjct: 1 MVLANLGKRLNSAVNXXXSNPDDDYATTVDTMLKGIVTALLESDVNIALVSRLRGNIR-- 58
Query: 60 VNLDDLAAGHNK------RRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGS 112
L D AAG ++++ + +F ELC ++D F PKK + +VIMFVGLQGS
Sbjct: 59 ATLLDGAAGAKSMSNAQTKKLVHKVVFEELCNLVDCHASEPFKPKKKQTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 119 GKTTSCTKLAVYYHKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE +++IVDTSGRH+QE LF+EM ++ + P+ I V+D+SIGQAA Q
Sbjct: 179 EEGITKFKKEKFEIVIVDTSGRHRQEEELFKEMVEIGKVVKPNQTIMVLDASIGQAAEQQ 238
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK S + GA+I+TKMDGHAKGGGA+SA+AAT +P+IFIGTGEH+ +FE F K FVS
Sbjct: 239 SKAFKDSSNFGAIILTKMDGHAKGGGAISAIAATNTPIIFIGTGEHIHDFEKFSPKSFVS 298
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD+ G M++ + + LL+ + +G FTL
Sbjct: 299 KLLGIGDFEGLMEQFQTISNKEDTQALLENIQQGKFTL 336
>gi|330933421|ref|XP_003304165.1| hypothetical protein PTT_16633 [Pyrenophora teres f. teres 0-1]
gi|311319393|gb|EFQ87728.1| hypothetical protein PTT_16633 [Pyrenophora teres f. teres 0-1]
Length = 541
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 179/331 (54%), Positives = 247/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDAMVKEISNALVEADVNVKLVMNLRQSIKRTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAGEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQNVVTPDQTIMVLDGTIGQAAESQARAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ +++G FT++
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIK 329
>gi|190347110|gb|EDK39324.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 560
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/356 (50%), Positives = 243/356 (68%), Gaps = 30/356 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG + A+ +S+ + E+ + + +I ALL++DV KLV +++ NIK
Sbjct: 15 MVLAELGSRLRDALSGVSSGS---EEEIQAMIKDICTALLESDVNVKLVAKLRDNIKAKV 71
Query: 58 -KIVNLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPS---------------FTPK 97
K V D+ AA NKR+ +Q+ +F+ELC ++D P KP T
Sbjct: 72 KKEVRNDEAAA--NKRKKLQKIVFDELCALVDSHEEPPKPKKLSQQAKQKSIRGKKITKN 129
Query: 98 KGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+ +IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNATK+ I
Sbjct: 130 NAESHIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNATKSSI 189
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P+YGSY E+DPV++A EGV F+KE D+IIVDTSGRHKQE +LF+EM Q+SEA P
Sbjct: 190 PYYGSYLETDPVKVAHEGVVKFRKEKFDIIIVDTSGRHKQEQSLFDEMVQISEAVQPTQT 249
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
I VMD SIGQAA QA+AFK++ G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGE
Sbjct: 250 IMVMDGSIGQAAESQARAFKETSDFGSIILTKMDGHAKGGGAISAVAATQTPIVFIGTGE 309
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLR 331
H+ + E F F+S+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 310 HVGDLETFRPSAFISKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLR 365
>gi|396497422|ref|XP_003844973.1| similar to signal recognition particle 54 kda protein
[Leptosphaeria maculans JN3]
gi|312221554|emb|CBY01494.1| similar to signal recognition particle 54 kda protein
[Leptosphaeria maculans JN3]
Length = 533
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/331 (53%), Positives = 248/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDAMVKEISNALVEADVNVKLVMNLRQSIKRTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+++EL K++DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVYDELVKLVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAGEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH+QE LF+EM Q+ A PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQNAVQPDQTIMVLDGTIGQAAESQARAFKEAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+++TK DG A GGGA+SAVAAT +P++FIG GEH+ + E F + FVS+LLGMGD
Sbjct: 241 DFGAIVITKTDGAAAGGGAISAVAATHTPIVFIGNGEHLLDLERFAPQAFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + +DQ+ + ++ +++G FT++
Sbjct: 301 QGLVEHVQS-LKLDQK-DTMKHITQGIFTIK 329
>gi|260941516|ref|XP_002614924.1| hypothetical protein CLUG_04939 [Clavispora lusitaniae ATCC 42720]
gi|238851347|gb|EEQ40811.1| hypothetical protein CLUG_04939 [Clavispora lusitaniae ATCC 42720]
Length = 569
Score = 343 bits (879), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 177/354 (50%), Positives = 243/354 (68%), Gaps = 26/354 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + E + + I ALL++DV +LV ++ NI++ +
Sbjct: 21 MVLADLGSRLRNALGSVESGS---EDEVQNMIKNICSALLESDVNVRLVARLRDNIRQKI 77
Query: 61 NLDDLAAGH---NKRRIIQQAIFNELCKMLD----PGKP------------SFTPKK--G 99
++ +A NKR+ +Q+ +F+ELC ++D P KP PKK
Sbjct: 78 AVEIKSANESSANKRKKLQKIVFDELCGLVDSHEEPPKPKKLSQTKSVAKHGKKPKKIAA 137
Query: 100 KPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 159
+ VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ IPF
Sbjct: 138 ESHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKSNIPF 197
Query: 160 YGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIF 219
YGSY E+DPV++A EGV+ FK++ D+IIVDTSGRHKQE +LF EM Q+SEA P I
Sbjct: 198 YGSYLETDPVKVAYEGVKKFKEDKFDIIIVDTSGRHKQEQSLFNEMVQISEAVQPTQTIM 257
Query: 220 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 279
VMD+SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGEH+
Sbjct: 258 VMDASIGQAAEGQAKAFKESSNFGSIILTKMDGHAKGGGAISAVAATETPIVFIGTGEHV 317
Query: 280 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLR 331
+FEVF F+S+LLG+GD ++ + + D + + L+ EG FTLR
Sbjct: 318 GDFEVFKPSTFISKLLGIGDVQSLIEHVQSLNLQDDENHKKTLENFKEGKFTLR 371
>gi|238879597|gb|EEQ43235.1| signal recognition particle 54 kDa protein [Candida albicans WO-1]
Length = 556
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 241/353 (68%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLR 331
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLR 350
>gi|50292271|ref|XP_448568.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527880|emb|CAG61531.1| unnamed protein product [Candida glabrata]
Length = 532
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 234/337 (69%), Gaps = 8/337 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I+ ALL+ADV LV +++ NI+ +
Sbjct: 1 MVLADLGKRINNAVNSALSNTEDDYVNSIDGMLKGISTALLEADVNIMLVSKVRNNIRSV 60
Query: 60 VNLDDLAAGHN-----KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSG 113
+ LD+ + ++++Q+ +F+ELC ++D F PKK ++IMFVGLQGSG
Sbjct: 61 L-LDNKTTNRSMNNVQTKKLVQKTVFDELCGLVDCTDHKVFQPKKKATNIIMFVGLQGSG 119
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 120 KTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAVKARIPFYGSYTETDPVKVAG 179
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQA 233
+G+ FKKE D+IIVDTSGRH QE LF EM Q+S P+ I V+D+SIGQAA Q+
Sbjct: 180 DGIAKFKKEKFDVIIVDTSGRHHQEEELFHEMVQISNVIKPNQTIMVLDASIGQAAEQQS 239
Query: 234 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 293
+AFK+S GA+I+TKMDGHAKGGGA+SAVAAT +P+ FIGTGEH+ + E F K F+S+
Sbjct: 240 KAFKESSDFGAIILTKMDGHAKGGGAISAVAATNTPIAFIGTGEHIHDLEKFSPKSFISK 299
Query: 294 LLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
LLG+GD G +++ V + ++ + +G FTL
Sbjct: 300 LLGIGDIEGLFEQLKTVSNKEDTKATMENIQQGKFTL 336
>gi|344232045|gb|EGV63924.1| signal recognition particle protein [Candida tenuis ATCC 10573]
Length = 554
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/352 (49%), Positives = 243/352 (69%), Gaps = 24/352 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ +S+ + D+++ L +I+ AL++ DV FKLV ++ NI++ +
Sbjct: 1 MVLADLGNRLKGALSSVSSGS--DDEIA-ALLKDISNALIENDVNFKLVFRLKENIRQKI 57
Query: 61 NLDDLAAG--HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS---------------- 102
+ D + NKR+ +Q+A+++EL ++D + KK S
Sbjct: 58 DTDSFKSDTVANKRKKLQKAVYDELVALVDAYEEPPQIKKLSASSTTAKGKKKLVKKRES 117
Query: 103 -VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+YG
Sbjct: 118 HVIMFVGLQGAGKTTSCTKLAVYYKKRGYKVGLVCADTFRAGAFDQLKQNAIKANIPYYG 177
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
SY E+DPV+++ EGV FK E D++IVDTSGRHKQE +LF EM Q+SEA P+ + VM
Sbjct: 178 SYLETDPVKVSAEGVAKFKAERFDIVIVDTSGRHKQEESLFSEMVQISEAILPNQTVMVM 237
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D SIGQAA +QA+AFK++ G++I+TKMDGHAKGGGA+SA+AATK+P+IFIGTGEH+ +
Sbjct: 238 DGSIGQAAEEQAKAFKEASDFGSIILTKMDGHAKGGGAISAIAATKTPIIFIGTGEHVAD 297
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLR 331
FE+F F+S+LLG+GD MD + + D + + ++ + EG FT+R
Sbjct: 298 FELFKPSSFISKLLGIGDLQSLMDHVKSLNLQDDENHKKTMEHIKEGKFTVR 349
>gi|68475987|ref|XP_717934.1| hypothetical protein CaO19.3243 [Candida albicans SC5314]
gi|68476118|ref|XP_717868.1| hypothetical protein CaO19.10753 [Candida albicans SC5314]
gi|46439602|gb|EAK98918.1| hypothetical protein CaO19.10753 [Candida albicans SC5314]
gi|46439670|gb|EAK98985.1| hypothetical protein CaO19.3243 [Candida albicans SC5314]
Length = 556
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 241/353 (68%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLR 331
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLR 350
>gi|146416143|ref|XP_001484041.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 560
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/356 (50%), Positives = 243/356 (68%), Gaps = 30/356 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG + A+ +S+ + E+ + + +I ALL++DV KLV +++ NIK
Sbjct: 15 MVLAELGSRLRDALSGVSSGS---EEEIQAMIKDICTALLESDVNVKLVAKLRDNIKAKV 71
Query: 58 -KIVNLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPS---------------FTPK 97
K V D+ AA NKR+ +Q+ +F+ELC ++D P KP T
Sbjct: 72 KKEVRNDEAAA--NKRKKLQKIVFDELCALVDSHEEPPKPKKLSQQAKQKSIRGKKITKN 129
Query: 98 KGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+ +IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNATK+ I
Sbjct: 130 NAESHIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNATKSLI 189
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P+YGSY E+DPV++A EGV F+KE D+IIVDTSGRHKQE +LF+EM Q+SEA P
Sbjct: 190 PYYGSYLETDPVKVAHEGVVKFRKEKFDIIIVDTSGRHKQEQSLFDEMVQISEAVQPTQT 249
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
I VMD SIGQAA QA+AFK++ G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGE
Sbjct: 250 IMVMDGSIGQAAELQARAFKETSDFGSIILTKMDGHAKGGGAISAVAATQTPIVFIGTGE 309
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLR 331
H+ + E F F+S+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 310 HVGDLETFRPSAFISKLLGIGDIQSLIEHVQLLNLQDDESHKKTMENFKEGKFTLR 365
>gi|453083661|gb|EMF11706.1| signal recognition particle 54 kDa protein [Mycosphaerella
populorum SO2202]
Length = 519
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/331 (53%), Positives = 245/331 (74%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ ++ ++ A +DEK + + EI AL++ADV KLV ++ IK V
Sbjct: 1 MVLQDLGRRINASLNDITRAPTLDEKAFDGMIKEICSALMEADVNVKLVANLRKTIKSAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++L A NK+RIIQ+A+F+ L ++DP + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNELPAHANKKRIIQKAVFDALVDIVDPHQKPYEPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVNQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QE ALF EM ++ +A +P I V+D+SIGQAA Q++AFK +
Sbjct: 181 KEKFEIIIVDTSGRHHQEDALFAEMVEIQQAVSPHQTIMVLDASIGQAAEAQSRAFKDTA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+++IGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVYIGTGEHLLDLEKFNPQSFVSKLLGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G M+ + + + +DQ+ E ++ ++EG FT+R
Sbjct: 301 QGLMEHV-QTLKLDQK-ETMKNITEGRFTVR 329
>gi|3334344|sp|O42816.1|SRP54_CANAL RecName: Full=Signal recognition particle 54 kDa protein homolog
gi|2739331|emb|CAA10999.1| Srp54 protein [Candida albicans]
Length = 556
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 241/353 (68%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLR 331
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLR 350
>gi|401842173|gb|EJT44430.1| SRP54-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 539
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 235/338 (69%), Gaps = 8/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNSAISNTQDDFATSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 V----NLDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQGS 112
+ ++ +++IQ+ +F+ELCK++ G + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSENSTTNAQTKKLIQKTVFDELCKLVTCGGNEEKAFLPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMVEISNVIRPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTL 338
>gi|241957976|ref|XP_002421707.1| signal recognition particle (SRP) subunit, piutative [Candida
dubliniensis CD36]
gi|223645052|emb|CAX39646.1| signal recognition particle (SRP) subunit, piutative [Candida
dubliniensis CD36]
Length = 567
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 246/353 (69%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ ++ + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-SQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKP--------SFTPKKGKPS--- 102
N+ + NKR+ +Q+ IF+ELC ++D P KP + KK + S
Sbjct: 58 EEANVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRVSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P + V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPSQTVMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLR 331
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTL+
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLK 350
>gi|398393398|ref|XP_003850158.1| hypothetical protein MYCGRDRAFT_75124 [Zymoseptoria tritici IPO323]
gi|339470036|gb|EGP85134.1| hypothetical protein MYCGRDRAFT_75124 [Zymoseptoria tritici IPO323]
Length = 523
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/331 (53%), Positives = 242/331 (73%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSQTLDEKAFDGMIKEISNALVEADVSIKLVSTLRKTIKTSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L NKRRIIQ+A+F+ L ++DP + + P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFSELPPSANKRRIIQKAVFDALVDIVDPHQKPYEPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVNQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QE ALF EM ++ A P + V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMTEIQSAVQPHQTVMVLDASIGQAAESQSRAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IFIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIIFIGTGEHLLDMEKFNPQSFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G M+ + + +DQ+ + ++ ++EG F++R
Sbjct: 301 QGLMEHVQS-LRLDQK-DTMKNITEGKFSVR 329
>gi|452981868|gb|EME81627.1| hypothetical protein MYCFIDRAFT_71818 [Pseudocercospora fijiensis
CIRAD86]
Length = 521
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/331 (53%), Positives = 244/331 (73%), Gaps = 2/331 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + + EI+ AL++ADV LV+ ++ IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRAQTLDEKAFDGMIKEISNALVEADVNVGLVKNLRQTIKGTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+DL NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNDLPPHANKKRIIQKAVFDALVDIVNPHQNPYQPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GVE FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QEAALF EM+ + A +P I V+D+SIGQAA Q++ FK +
Sbjct: 181 KEKFEIIIVDTSGRHHQEAALFAEMKDIQHAVSPHQTIMVLDASIGQAAESQSREFKDAA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPQSFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++ + + + +DQ+ E ++ ++EG F++R
Sbjct: 301 QGLVEHV-QSLKLDQK-ETMKNITEGKFSVR 329
>gi|255722509|ref|XP_002546189.1| signal recognition particle 54 kDa protein [Candida tropicalis
MYA-3404]
gi|240136678|gb|EER36231.1| signal recognition particle 54 kDa protein [Candida tropicalis
MYA-3404]
Length = 555
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/353 (50%), Positives = 243/353 (68%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICGALLESDVNVKLVAKLRGNIKTKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
N+ + NKR+ +Q+ IF+ELC ++D P K S T K K
Sbjct: 58 EEGNIVQETSAMNKRKKLQKIIFDELCALVDSHVEPPKPKKLSTTTKTINGKKIRLSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLR 331
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTL+
Sbjct: 298 DLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIENIKEGKFTLK 350
>gi|295666878|ref|XP_002793989.1| signal recognition particle 54 kDa protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277642|gb|EEH33208.1| signal recognition particle 54 kDa protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 530
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 235/332 (70%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ IDE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNIDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +V+MFVGLQG+GKTTTCTK
Sbjct: 61 QFSSLPPAVNKKRLIQKTVFDQLVALVDPHCEPFKPKKGRSNVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQEA LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEADLFAEMTQIQTAIKPDQTILVLDGTIGQAAEIQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + ++ G FTLR
Sbjct: 301 AGLVEHVQAVTKDSATAKETYKHITAGIFTLR 332
>gi|366996675|ref|XP_003678100.1| hypothetical protein NCAS_0I00870 [Naumovozyma castellii CBS 4309]
gi|342303971|emb|CCC71755.1| hypothetical protein NCAS_0I00870 [Naumovozyma castellii CBS 4309]
Length = 585
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 240/335 (71%), Gaps = 5/335 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKV-LNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D V ++ L I ALL++DV LV ++ NIK
Sbjct: 62 MVLADLGKRINGAVNNALSNTSDDYAVNVDTMLKAIVTALLESDVNIALVSRLRNNIKSK 121
Query: 60 VNLDDLAAGHNK---RRIIQQAIFNELCKMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKT 115
+ A+G +++IQ+ +F+ELC ++D K F PKK + +VIMFVGLQGSGKT
Sbjct: 122 LMAQKPASGSTNAQTKKLIQKTVFDELCNLVDCDVKEPFNPKKKQCNVIMFVGLQGSGKT 181
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A EG
Sbjct: 182 TSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVQVADEG 241
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
++ FKKE ++IIVDTSGRH+QE ALF+EM ++S P+ I V+D+SIGQAA Q++A
Sbjct: 242 IKKFKKEKFEIIIVDTSGRHRQEEALFQEMIEISHVVKPNQTIMVLDASIGQAAEQQSKA 301
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS+LL
Sbjct: 302 FKDSSDFGAIILTKMDGHAKGGGAISAVAATHTPIIFIGTGEHVHDFEKFSPKSFVSKLL 361
Query: 296 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G+GD M++I V + +++ + +G FTL
Sbjct: 362 GIGDIESLMEQIQTVSNEEDTKAVMENIQQGKFTL 396
>gi|323302581|gb|EGA56388.1| Srp54p [Saccharomyces cerevisiae FostersB]
Length = 452
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/338 (49%), Positives = 234/338 (69%), Gaps = 8/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTL 338
>gi|149246331|ref|XP_001527635.1| signal recognition particle 54 kDa protein [Lodderomyces
elongisporus NRRL YB-4239]
gi|146447589|gb|EDK41977.1| signal recognition particle 54 kDa protein [Lodderomyces
elongisporus NRRL YB-4239]
Length = 563
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/353 (49%), Positives = 239/353 (67%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + E + + +I ALL++D+ KLV +++ NI++ +
Sbjct: 1 MVLADLGERLRGALSSVESGS---EDEIQAMIKDICTALLESDINVKLVAKLRGNIREKI 57
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
L+ + + NKR+ +Q+ IF+ELC ++D P K S T K K
Sbjct: 58 ELEGVLKEQSSQNKRKKLQKIIFDELCALVDSHTEPPKPKKLSSTTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK E D+IIVDTSGRH+QE LF EM Q+ EA P I V
Sbjct: 178 GSYLEPDPVKIAYEGVQKFKHEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESADFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLR 331
+ E+F FVS+LLG+GD ++ + + + D+ + ++ + EG FTL+
Sbjct: 298 DLEIFKPTTFVSKLLGIGDIQSLIEHVQSLQLHQDEGHKKTIENIKEGKFTLK 350
>gi|452841447|gb|EME43384.1| hypothetical protein DOTSEDRAFT_72702 [Dothistroma septosporum
NZE10]
Length = 522
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/333 (52%), Positives = 243/333 (72%), Gaps = 2/333 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ IDEK + + E+ AL++ADV KLV ++ IK V
Sbjct: 1 MVLADLGKRINSAVNDLTRGQTIDEKAFDGMVKEVCNALMEADVNIKLVAVLRKTIKNAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNEMPPHANKKRIIQKAVFDALVDIVNPHQTPYNPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QE ALF EM ++ A P I V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMVEIQGAVQPHQTIMVLDASIGQAAEAQSRAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPESFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G ++ + + +DQ+ E ++ ++EG F++R M
Sbjct: 301 QGLVEHVQS-LKLDQK-ETMKNITEGKFSVRDM 331
>gi|448508734|ref|XP_003865992.1| Srp54 signal recognition particle (SRP) subunit [Candida
orthopsilosis Co 90-125]
gi|380350330|emb|CCG20551.1| Srp54 signal recognition particle (SRP) subunit [Candida
orthopsilosis Co 90-125]
Length = 554
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 244/353 (69%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + D+++ + + +I ALL++D+ KLV +++ NI+ +
Sbjct: 1 MVLADLGERLRGALSSVEKGS--DDEI-QQMIKDICSALLESDINVKLVAKLRGNIRDKI 57
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
+++ + N+R+ +Q+ I++ELC ++D P K S T K K
Sbjct: 58 EEENVLKETSSQNRRKKLQKIIYDELCALVDSHAEPPKPKKLSATTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA +P+ I V
Sbjct: 178 GSYLEPDPVKIASEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVHPNQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSDFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLR 331
+FEVF F+S+LLG+GD ++ + + + D+ + ++ + EG FTL+
Sbjct: 298 DFEVFKPTTFISKLLGIGDIQSLIEHVQSLNLHQDEGHKQTIENIKEGKFTLK 350
>gi|6325345|ref|NP_015413.1| Srp54p [Saccharomyces cerevisiae S288c]
gi|1711516|sp|P20424.2|SRP54_YEAST RecName: Full=Signal recognition particle subunit SRP54; AltName:
Full=Signal recognition particle 54 kDa protein homolog
gi|4542|emb|CAA35952.1| signal recognition particle [Saccharomyces cerevisiae]
gi|172705|gb|AAA35092.1| signal recognition particle 54 kDa subunit [Saccharomyces
cerevisiae]
gi|1230693|gb|AAB68136.1| Srp54p: Signal recognition particle 54 kd subunit (Swiss Prot.
accession number P20424) [Saccharomyces cerevisiae]
gi|151942868|gb|EDN61214.1| Signal recognition particle (SRP) subunit [Saccharomyces cerevisiae
YJM789]
gi|256272197|gb|EEU07192.1| Srp54p [Saccharomyces cerevisiae JAY291]
gi|259150240|emb|CAY87043.1| Srp54p [Saccharomyces cerevisiae EC1118]
gi|285815613|tpg|DAA11505.1| TPA: Srp54p [Saccharomyces cerevisiae S288c]
gi|323331335|gb|EGA72753.1| Srp54p [Saccharomyces cerevisiae AWRI796]
gi|323335166|gb|EGA76456.1| Srp54p [Saccharomyces cerevisiae Vin13]
gi|323346316|gb|EGA80606.1| Srp54p [Saccharomyces cerevisiae Lalvin QA23]
gi|323350224|gb|EGA84371.1| Srp54p [Saccharomyces cerevisiae VL3]
gi|349581893|dbj|GAA27050.1| K7_Srp54p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296095|gb|EIW07198.1| Srp54p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|226740|prf||1604366B signal recognition particle 54kD protein
Length = 541
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/338 (49%), Positives = 234/338 (69%), Gaps = 8/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTL 338
>gi|207340327|gb|EDZ68711.1| YPR088Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 541
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/338 (49%), Positives = 234/338 (69%), Gaps = 8/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTL 338
>gi|323306831|gb|EGA60116.1| Srp54p [Saccharomyces cerevisiae FostersO]
Length = 547
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/338 (49%), Positives = 234/338 (69%), Gaps = 8/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTL 338
>gi|448081661|ref|XP_004194943.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
gi|359376365|emb|CCE86947.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
Length = 551
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/356 (48%), Positives = 235/356 (66%), Gaps = 28/356 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + DEK + + +I ALL+ DV KLV ++ NIK+ +
Sbjct: 1 MVLADLGSRLRGALSSVESG---DEKEIQNMVKDICSALLETDVNIKLVARLRDNIKEKI 57
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK-------------------- 98
++D G NKR+ +Q+ +F+ELC ++D + PKK
Sbjct: 58 KTQINDNEGGSNKRKKLQKIVFDELCGLVDSHEEPPKPKKLSHKQQTTRGAKGGAKATKV 117
Query: 99 -GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+IM VGLQG+GKTT+ TK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ I
Sbjct: 118 TSDSHIIMLVGLQGAGKTTSATKLALYYKKRGFKIGLVCADTFRAGAFDQLKQNAIKSGI 177
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P+YGSY E+DPV++A +GV+ FK+E D+IIVDTSGRHKQE +LF EM Q+S+ P
Sbjct: 178 PYYGSYVETDPVKVAHDGVQKFKQEKFDIIIVDTSGRHKQEQSLFNEMIQISKMIQPTQT 237
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
I VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGE
Sbjct: 238 IMVMDGSIGQAAESQAKAFKESSDFGSIILTKMDGHAKGGGAISAVAATRTPIVFIGTGE 297
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLR 331
H+ + EVF FVS+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 298 HVGDLEVFKPSSFVSKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLR 353
>gi|4538|emb|CAA34781.1| Srh1p [Saccharomyces cerevisiae]
Length = 541
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/338 (49%), Positives = 234/338 (69%), Gaps = 8/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKEGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTL 338
>gi|255636768|gb|ACU18718.1| unknown [Glycine max]
Length = 175
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 156/175 (89%), Positives = 170/175 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV++ +G
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKLLWKG 175
>gi|449297804|gb|EMC93821.1| hypothetical protein BAUCODRAFT_93699 [Baudoinia compniacensis UAMH
10762]
Length = 526
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 176/333 (52%), Positives = 240/333 (72%), Gaps = 2/333 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I AL +ADV +LV ++ IK V
Sbjct: 1 MVLQDLGRRINTAVTDLTRAPTLDEKAFDSMLRDIANALAEADVNIRLVANLRKTIKTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFSELPPSANKKRIIQKAVFDALVDIVNPHQTPYQPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A +GVE FK
Sbjct: 121 LARWYMARGFKTCLVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE ++IIVDTSGRH QE ALF EM ++ A P I V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMVEIQNAVQPQQTIMVLDASIGQAAEAQSRAFKETA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPQSFVSKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
G ++ + + +DQ+ E ++ +SEG F++R M
Sbjct: 301 QGLVEHVQS-LKLDQK-ETMKNISEGKFSVRDM 331
>gi|401623147|gb|EJS41254.1| srp54p [Saccharomyces arboricola H-6]
Length = 543
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 235/338 (69%), Gaps = 8/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NIK
Sbjct: 1 MVLADLGKRINSAVNSAISNTQDDFATSVDVMLKGIVTALLESDVNIALVSKLRNNIKSQ 60
Query: 60 V---NLDDLAAGHNK-RRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ N + A + + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKATTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+SIGQAA Q
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ 240
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
++AFK S GA+I+TKMDG A+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S
Sbjct: 241 SKAFKDSSDFGAIILTKMDGDARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS 300
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+LLG+GD +++ V + ++ + +G FTL
Sbjct: 301 KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTL 338
>gi|448086145|ref|XP_004196030.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
gi|359377452|emb|CCE85835.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
Length = 556
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/356 (48%), Positives = 235/356 (66%), Gaps = 28/356 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + DEK + + +I ALL+ DV KLV ++ NIK+ +
Sbjct: 1 MVLADLGSRLRGALSSVESG---DEKEIQNMVKDICSALLETDVNIKLVARLRDNIKEKI 57
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK-------------------- 98
++D G NKR+ +Q+ +F+ELC ++D + PKK
Sbjct: 58 KTQINDNEGGSNKRKKLQKIVFDELCALVDSHEEPPKPKKLSHRQQTTRGAKGGAKATKV 117
Query: 99 -GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+IM VGLQG+GKTT+ TK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ I
Sbjct: 118 TSDSHIIMLVGLQGAGKTTSATKLALYYKKRGFKIGLVCADTFRAGAFDQLKQNAIKSGI 177
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P+YGSY E+DPV++A +GV+ FK+E D+IIVDTSGRHKQE +LF EM Q+S+ P
Sbjct: 178 PYYGSYVETDPVKVAHDGVQKFKQEKFDIIIVDTSGRHKQEQSLFNEMIQISKMIQPTQT 237
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
I VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGE
Sbjct: 238 IMVMDGSIGQAAESQAKAFKESSDFGSIILTKMDGHAKGGGAISAVAATRTPIVFIGTGE 297
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLR 331
H+ + +VF FVS+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 298 HVGDLDVFKPSSFVSKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLR 353
>gi|150866311|ref|XP_001385860.2| Signal recognition particle 54 kDa protein [Scheffersomyces
stipitis CBS 6054]
gi|149387567|gb|ABN67831.2| Signal recognition particle 54 kDa protein [Scheffersomyces
stipitis CBS 6054]
Length = 561
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 239/352 (67%), Gaps = 24/352 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + +A+ DE++ N+ + ++ ALL++DV KLV +++ NIK+ V
Sbjct: 1 MVLADLGSRLRGALSSVESAS--DEEI-NQMIKDVCTALLESDVNIKLVVKLRDNIKQKV 57
Query: 61 NLDDLA--AGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS---------------- 102
D + + NKR+ +Q+ I++EL ++D + PKK S
Sbjct: 58 KTDVTSEESAINKRKKLQKIIYDELVGLVDSHEEPPKPKKLSTSTKVINGKKKKVAKTNS 117
Query: 103 -VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
+IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+YG
Sbjct: 118 HIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKASIPYYG 177
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
SY E DPV+IA EGV F+ E D+IIVDTSGRH+QE LF+EM Q+ E P I VM
Sbjct: 178 SYLEQDPVKIAYEGVTKFRSEKFDIIIVDTSGRHRQEHQLFQEMVQIGEMIQPTQTIMVM 237
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+ +
Sbjct: 238 DGSIGQAAESQAKAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIGD 297
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIH--EVVPMDQQPELLQKLSEGNFTLR 331
E+F F+S+LLG+GD ++ + + + + ++ + EG FTL+
Sbjct: 298 LEIFKPTTFISKLLGIGDIQSLIEHVQGLNLQNDENHKQTMENIKEGKFTLK 349
>gi|354544876|emb|CCE41601.1| hypothetical protein CPAR2_801530 [Candida parapsilosis]
Length = 559
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 241/353 (68%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + D+++ + + +I ALL++D+ KLV +++ NI+ +
Sbjct: 1 MVLADLGERLRGALSSVEKGS--DDEI-QQMIKDICSALLESDINVKLVAKLRGNIRDKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
N+ + N+R+ +Q+ I++ELC ++D P K S T K K
Sbjct: 58 EEGNVLKETSSQNRRKKLQKIIYDELCALVDSHVEPPKPKKLSATTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA +P I V
Sbjct: 178 GSYLEPDPVKIAAEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAIHPSQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSDFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLR 331
+ EVF F+S+LLG+GD ++ + + + D+ + ++ + EG FTL+
Sbjct: 298 DLEVFKPTTFISKLLGIGDIQSLIEHVQSLNLHQDEGHKQTIENIKEGKFTLK 350
>gi|440794394|gb|ELR15555.1| signal peptide binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 496
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 158/345 (45%), Positives = 236/345 (68%), Gaps = 11/345 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG I +A+ ++ AT++D+ +++ L +I L+ ADVQ KLV +M+ +++ +
Sbjct: 1 MALRELGTKIKQAVDMVARATLVDQDTVDDMLKQICNGLIAADVQVKLVVQMRQRMRERI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDP----GKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ G +K++II++ + +EL ++DP P F+P +G+ +V+MFVGLQG+GKTT
Sbjct: 61 QREFAIPGSSKQKIIRRVVLDELVALVDPQPGQANPKFSPARGRTNVVMFVGLQGAGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
T K A ++++GWK A+VCADTFRAGA QL Q A ++P Y T+ DPV +A EG+
Sbjct: 121 TVAKLALQYKRRGWKVAMVCADTFRAGADHQLLQLARAIQVPAYADGTQFDPVVVAREGI 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
+ FK+E ++I+VDTSGRHKQEA LFEEM Q++ A NPD V++V+D +IGQAA+DQ AF
Sbjct: 181 DCFKREGREIILVDTSGRHKQEAQLFEEMEQLAAAVNPDTVMYVLDGTIGQAAYDQVLAF 240
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
KQ + +G++IVTK+DGHA+GGGALSAVAA P+ IGTGEH+D+ E FD + F+ ++LG
Sbjct: 241 KQRIRIGSIIVTKLDGHARGGGALSAVAAANCPITHIGTGEHVDDLESFDPRGFIQKMLG 300
Query: 297 MGDWSGFMDKIHEVVPMDQQPE-------LLQKLSEGNFTLRIMF 334
MG+ M+ + V D E + +L +G FTLR ++
Sbjct: 301 MGNIPALMETMKNAVGADTSAEGKRDSALMANRLLQGGFTLRDLY 345
>gi|294657854|ref|XP_460149.2| DEHA2E19404p [Debaryomyces hansenii CBS767]
gi|199432996|emb|CAG88422.2| DEHA2E19404p [Debaryomyces hansenii CBS767]
Length = 541
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 165/324 (50%), Positives = 222/324 (68%), Gaps = 24/324 (7%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIV--NLDDLAAGHNKRRIIQQAIFNELCKMLDP 89
+ +I ALL++DV KLV +++ NIK V ++D + NKR+ +Q+ +F+ELC ++D
Sbjct: 2 IKDICNALLESDVNIKLVAKLRDNIKAKVKTQINDEESSTNKRKKLQKIVFDELCSLVDS 61
Query: 90 GKPSFTPKK--------------------GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
+ PKK G+ VIMFVGLQG+GKTT+CTK A Y++K+G
Sbjct: 62 HEEPPKPKKLSQQQQKSKTLRGKKATKVTGESHVIMFVGLQGAGKTTSCTKLAVYYKKRG 121
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K LVCADTFRAGAFDQLKQNA K+ IP+YGSY E+DPV++A EGV FK+E D+IIV
Sbjct: 122 YKVGLVCADTFRAGAFDQLKQNAIKSSIPYYGSYIETDPVKVAYEGVVKFKQEKFDIIIV 181
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DTSGRHKQE +LF EM Q+SE P I VMD SIGQAA QA+AFK+S G++I+TK
Sbjct: 182 DTSGRHKQEQSLFNEMIQISEMIVPTQTIMVMDGSIGQAAESQAKAFKESSQFGSIILTK 241
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MDGHA+GGGA+SAVA TK+P++FIGTGEH + E+F F+S+LLG+GD ++ +
Sbjct: 242 MDGHARGGGAISAVATTKTPIVFIGTGEHATDLEIFKPTSFISKLLGIGDIQSLIEHVQS 301
Query: 310 VVPMDQQP--ELLQKLSEGNFTLR 331
+ D + + ++ EG FTLR
Sbjct: 302 LNLQDDESHKKTIENFKEGKFTLR 325
>gi|344304252|gb|EGW34501.1| hypothetical protein SPAPADRAFT_134434 [Spathaspora passalidarum
NRRL Y-27907]
Length = 559
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/353 (49%), Positives = 241/353 (68%), Gaps = 25/353 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NI+ +
Sbjct: 1 MVLADLGARLRGALSSVESGS--DDEI-QQMIKDICGALLESDVNIKLVAKLRDNIRSQI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKP-----SFTPKKGK-------- 100
N+ A+ NKR+ +Q+ I++ELC ++D P KP S KGK
Sbjct: 58 ASSNIAQEASPMNKRKKLQKVIYDELCGLVDSHVEPPKPKKINASTKTIKGKKVKLSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+ LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFTVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFV 220
GSY E DPV+IA EGV FK+E D+IIVDTSGRH+QE LF EM Q+ +A P I V
Sbjct: 178 GSYLEPDPVKIAFEGVSKFKQEKFDIIIVDTSGRHRQEQQLFTEMVQIGDAIQPTQTIMV 237
Query: 221 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 280
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 238 MDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 297
Query: 281 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLR 331
+ EVF F+S+LLG+GD ++ + + + + + ++ + EG FTL+
Sbjct: 298 DLEVFKPTTFISKLLGIGDIQSLIEHVQSLNLQNDEGHKQTIENIKEGKFTLK 350
>gi|365762561|gb|EHN04095.1| Srp54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 510
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 219/306 (71%), Gaps = 7/306 (2%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLA----AGHNKRRIIQQAIFNELCKML 87
L I ALL++DV LV +++ NI+ + ++ + +++IQ+ +F+ELCK++
Sbjct: 2 LKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDELCKLV 61
Query: 88 D---PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
+ +F PKK K ++IMFVGLQGSGKTT+CTK A Y+ K+G+K LVCADTFRAGA
Sbjct: 62 TCEGSEEKAFVPKKRKTNIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGA 121
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEE 204
FDQLKQNA +A+IPFYGSYTE+DP ++A EG+ FKKE D+IIVDTSGRH QE LF+E
Sbjct: 122 FDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQE 181
Query: 205 MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 264
M ++S P+ I V+D+SIGQAA Q++AFK+S GA+I+TKMDGHA+GGGA+SAVA
Sbjct: 182 MIEISNVIKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVA 241
Query: 265 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 324
AT +P+IFIGTGEH+ + E F K F+S+LLG+GD +++ V + ++ +
Sbjct: 242 ATNTPIIFIGTGEHIHDLEKFSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENIQ 301
Query: 325 EGNFTL 330
+G FTL
Sbjct: 302 KGKFTL 307
>gi|164658964|ref|XP_001730607.1| hypothetical protein MGL_2403 [Malassezia globosa CBS 7966]
gi|159104503|gb|EDP43393.1| hypothetical protein MGL_2403 [Malassezia globosa CBS 7966]
Length = 617
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 245/345 (71%), Gaps = 14/345 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG +++A + +D +++ L ++ ALL +DV +LV++++ ++K V
Sbjct: 1 MVLADLGRRLNQAFSDLQRQPTLDAASVDQLLKDVCSALLASDVNVRLVQKLRQDVKDEV 60
Query: 61 N--LDDLAAGHN-----KRRIIQQAIFNELCKMLDPGKPSFTPK--KGKPSVIMFVGLQG 111
+ L+D + ++ +Q+ +F+ L K++DPG S + KG+ VIMFVGLQG
Sbjct: 61 SSLLNDKGKAESYTDAQRKHQVQRIVFDYLVKLVDPGDGSTKHRLDKGQQHVIMFVGLQG 120
Query: 112 SGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRI 171
SGKTT+CTK A ++QK+G++ LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV I
Sbjct: 121 SGKTTSCTKLALWYQKRGYRTGLVCADTFRAGAFDQLKQNAAKARIPFYGSYTETDPVAI 180
Query: 172 AVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFD 231
A GV +FKK D+IIVDTSGRHKQE LF EM +S A P I V+D+SIGQAA
Sbjct: 181 ASAGVTSFKKNRFDVIIVDTSGRHKQEKDLFAEMVDISRAVKPSQTIMVLDASIGQAAEA 240
Query: 232 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 291
Q +AFK++ GA+ VTK+DGHAKGGGA+SAVA+T++P+IFIGTGEH+ + E F +PF+
Sbjct: 241 QCRAFKEAADFGAMFVTKLDGHAKGGGAISAVASTQTPIIFIGTGEHVHDLEPFRARPFI 300
Query: 292 SRLLGMGDWSGFMDKIHEVVPMD----QQPELLQKLSE-GNFTLR 331
S+LLG+GD +G MDK+ EV + +Q ++++K+ E G FT+R
Sbjct: 301 SKLLGLGDLTGLMDKMEEVHMNEDVQQRQRDMMKKIQEGGTFTIR 345
>gi|401826054|ref|XP_003887121.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
gi|392998279|gb|AFM98140.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
Length = 466
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/329 (47%), Positives = 239/329 (72%), Gaps = 4/329 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + N+ D+ + + EI +L+ ++V K V +++ +++ ++
Sbjct: 1 MITELGRSITNTLSNLLNSPTTDQDI-ETAIKEICNSLILSNVNPKYVGDLRNSLRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G NK R++Q A++ +L +LDP S+ +KGK +V++FVGLQGSGKTT+ KY
Sbjct: 60 PKEMPPGFNKARMVQNAVYEKLVDLLDPKAESYKVEKGKANVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVAGAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +LI+VDTSGRH QE+ LF EM+ + P+ ++FVMD+ IGQ+A DQA FK +V
Sbjct: 179 EKFELILVDTSGRHTQESELFTEMKDIVREIRPNSIVFVMDAGIGQSAEDQAVGFKNAVD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG K GGALS+VAATK P+ F+GTGE M++ EVFD + FVSR+LGMGD
Sbjct: 239 VGSIILTKIDGTNKAGGALSSVAATKCPIEFVGTGEGMEDLEVFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G M+K+ + +D++ E+++KL +G FTL
Sbjct: 299 GLMEKVGS-LGIDEK-EVVKKLRQGKFTL 325
>gi|308808356|ref|XP_003081488.1| signal recognition particle 54kDa subunit (ISS) [Ostreococcus
tauri]
gi|116059951|emb|CAL56010.1| signal recognition particle 54kDa subunit (ISS) [Ostreococcus
tauri]
Length = 559
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 233/393 (59%), Gaps = 59/393 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +I+ A++++ +ID+ ++ L EI ALL ADV LV ++ N+ + V
Sbjct: 1 MVLNDLGNTITGALRRLQTRVVIDDDAVDGALKEICNALLSADVAVGLVVRLKKNVMRAV 60
Query: 61 NLDDL--AAGHNKRRIIQQAIFNELCKMLDPG---------------------------- 90
+ A G RR +++A+F EL +L+ G
Sbjct: 61 ETERASDAGGTRTRRTLERAVFKELANLLNGGGREDDQETPVSGPXXXXXXXKGSRAIGG 120
Query: 91 -------------KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCA 137
P + PKKGK +V+MFVGLQG+GKTTTCTK+A+Y+ +KG+K ALVCA
Sbjct: 121 KRGREGGRRGEGNAPRWAPKKGKRNVVMFVGLQGAGKTTTCTKFAHYYARKGFKAALVCA 180
Query: 138 DTFRAGAFDQLKQNATKAKIPFYGSYTESD----------------PVRIAVEGVETFKK 181
DTFRAGAFD PF + D P +IA V F++
Sbjct: 181 DTFRAGAFDXXXXXXXVRPGPFGPVEPKRDQRPKIPVLRLVHPRAMPAKIARGWVARFEE 240
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E DLIIVDTSGRH+QE ALFEEMR+++ T+P + IFVMDSSIGQ+A DQA AF +V
Sbjct: 241 EKMDLIIVDTSGRHRQEEALFEEMREIANVTDPTMTIFVMDSSIGQSAADQANAFASTVD 300
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG VI+TK+DGHAKGGGA+SAV+ TK+P++FIGTGEH+ E E FD FVS+LLGMGD
Sbjct: 301 VGGVIMTKLDGHAKGGGAISAVSETKAPILFIGTGEHIGEMEPFDANSFVSKLLGMGDMK 360
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G ++K+ E+VP + L + G FT+R+++
Sbjct: 361 GLVEKMTEIVPEESAERLADAIGSGTFTMRLLY 393
>gi|449328952|gb|AGE95227.1| signal recognition particle 54kDa subunit [Encephalitozoon
cuniculi]
Length = 466
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 156/329 (47%), Positives = 236/329 (71%), Gaps = 4/329 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + EI +L+ ++V + V +++ ++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSPATDQHI-ETAIREICNSLILSNVNPRYVSDLRDELRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ L +LDP S+ +KG+ SV++FVGLQGSGKTT+ KY
Sbjct: 60 PGKMAPGFNKARMVQNAVYERLVDLLDPRTESYKIEKGRTSVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPVR+A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVRVASAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +LI+VDTSGRH QE LF EM+ + +P ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 ERFELILVDTSGRHTQETELFTEMKDIIREISPSSIVFVMDAGIGQSAEDQAMGFKRAVD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG K GGA+S+VAATK P+ F+GTGE MD+ E FD + FVSR+LGMGD
Sbjct: 239 VGSIILTKIDGTTKAGGAISSVAATKCPIEFVGTGEGMDDLEAFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G M+K+ + +D++ E+++KL +G FTL
Sbjct: 299 GLMEKVGS-LGIDEK-EVVKKLRQGRFTL 325
>gi|19074175|ref|NP_584781.1| SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT (SRP54) [Encephalitozoon
cuniculi GB-M1]
gi|19068817|emb|CAD25285.1| SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT (SRP54) [Encephalitozoon
cuniculi GB-M1]
Length = 466
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/329 (47%), Positives = 236/329 (71%), Gaps = 4/329 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + EI +L+ ++V + V +++ ++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSPATDQHI-ETAIREICNSLILSNVNPRYVSDLRDELRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ L +LDP S+ +KG+ SV++FVGLQGSGKTT+ KY
Sbjct: 60 PGKMAPGFNKARMVQNAVYERLVDLLDPRTESYKIEKGRTSVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVASAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +LI+VDTSGRH QE LF EM+ + +P ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 ERFELILVDTSGRHTQETELFTEMKDIIREISPSSIVFVMDAGIGQSAEDQAMGFKRAVD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG K GGA+S+VAATK P+ F+GTGE MD+ E FD + FVSR+LGMGD
Sbjct: 239 VGSIILTKIDGTTKAGGAISSVAATKCPIEFVGTGEGMDDLEAFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G M+K+ + +D++ E+++KL +G FTL
Sbjct: 299 GLMEKVGS-LGIDEK-EVVKKLRQGRFTL 325
>gi|224154027|ref|XP_002337428.1| predicted protein [Populus trichocarpa]
gi|222839177|gb|EEE77528.1| predicted protein [Populus trichocarpa]
Length = 162
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/161 (95%), Positives = 158/161 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
>gi|300706383|ref|XP_002995462.1| hypothetical protein NCER_101628 [Nosema ceranae BRL01]
gi|239604578|gb|EEQ81791.1| hypothetical protein NCER_101628 [Nosema ceranae BRL01]
Length = 466
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/338 (48%), Positives = 243/338 (71%), Gaps = 6/338 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ LG SI+ ++ ++ ++ I D+ + +++I +L+ ++V LV +++ N+ + +
Sbjct: 1 MITDLGKSITASLSRLFSSNITDDSI-KYIIDDICTSLINSNVNPMLVEKIRNNLNEKI- 58
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
L + G NK+++I+ A+FNEL ++DP S +KGK +V++FVGLQG+GKTT+ KY
Sbjct: 59 LSENIQGFNKQKVIETAVFNELVSLVDPKIKSKELEKGKSNVVVFVGLQGAGKTTSICKY 118
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++KKG K ALVCADTFRAGAF+Q+KQNA K K+PFYGS E+DPV +A+EGV FKK
Sbjct: 119 ANYYKKKGLKVALVCADTFRAGAFEQIKQNAMKIKVPFYGS-EEADPVVVALEGVSRFKK 177
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E+ DLI VDTSGRH QE LF EM + A PD +IFVMD+ IGQ+A DQA FK +V+
Sbjct: 178 EDFDLICVDTSGRHTQEKDLFTEMTDIINAVTPDNIIFVMDAGIGQSAEDQALGFKNAVN 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I++K+DG K GGA+S+VA+ + P++F+GTGE+M++FEVF+ K FV R+LGMGD
Sbjct: 238 VGSIIISKIDGTVKAGGAISSVASIQCPILFVGTGENMEDFEVFEPKGFVGRMLGMGDLH 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQ 339
G KI + + +D++ EL K +G FTL FS+ F+
Sbjct: 298 GLSRKISD-LKIDEK-ELFNKFQKGTFTLN-DFSVQFK 332
>gi|123420898|ref|XP_001305857.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121887399|gb|EAX92927.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 490
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 235/334 (70%), Gaps = 1/334 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG + +I+++S + IDE V + EI+++L+ ADV ++V +++ +N
Sbjct: 1 MLQDLGDKLIGSIKKLSESKKIDETVYRNFMIEISKSLIAADVSKEIVFSFSKRLREKIN 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+++ G + +R+I++A+FNEL +++PG ++ P K K ++ M VGLQG+GKTTT TK
Sbjct: 61 FNEIPPGLSAKRVIEKAVFNELVTLINPGMTAYKPIKKKLNIFMMVGLQGAGKTTTVTKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++ WK ++ ADTFRAGA +QL QNA A+IP++ +TESDPV++A++G++ FKK
Sbjct: 121 ANYYKRRNWKTGVIAADTFRAGAREQLMQNAQTARIPYFVDFTESDPVQVALKGIDKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E ++ I+DTSGRH QE ALF EM+ ++E PD +IFVMD +IGQAA+DQA FK +V
Sbjct: 181 EKFEIAIIDTSGRHMQEEALFAEMKSLAENVVPDEIIFVMDGTIGQAAYDQALGFKNAVG 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+D +AKGGGALSAVAAT+SP+ FIG+GE+ + E FD FVSRLLG+ D +
Sbjct: 241 VGSIIITKLDSNAKGGGALSAVAATQSPISFIGSGENFTDLEWFDPSSFVSRLLGIADPT 300
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
F + E + D+ E+ Q + G F + +++
Sbjct: 301 IFQRTLEE-IDKDRNREIGQHILAGQFNFKDLYA 333
>gi|123492715|ref|XP_001326126.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121909036|gb|EAY13903.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 494
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 233/334 (69%), Gaps = 1/334 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG + +I+++S + IDEKV + E+ ++L+ AD ++V + +K +N
Sbjct: 1 MLQDLGEKLMGSIKKLSESKTIDEKVYVTFMAEVAKSLIAADCSKEIVFDFSRRLKDSIN 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + RR+I++A+FNEL K++DPG P++ P+K ++ M VGLQG+GKTTT TK
Sbjct: 61 FKEIPPGLSIRRVIEKAVFNELVKLIDPGIPAYKPQKKMLNIFMMVGLQGAGKTTTVTKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++++ W+ ++ ADTFRAGA +QL QNA A+IP++ +TE DPV+ A++G+E F+K
Sbjct: 121 ANFYKRRNWRTGVIAADTFRAGAREQLMQNAQTARIPYFVDFTEQDPVQAALKGIEKFRK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ +++I+DTSGRH QE ALF EM+ ++ A NP +IFVMD +IGQAA+DQA FK +V
Sbjct: 181 DKYEIVIIDTSGRHMQEEALFAEMKALAAAVNPHEIIFVMDGTIGQAAYDQALGFKNAVG 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+D +AKGGGALSAVAAT SP+ FIG+GE + E FD FVSRLLG+ D
Sbjct: 241 VGSIIITKLDSNAKGGGALSAVAATNSPISFIGSGEQFTDLEWFDPNSFVSRLLGIQD-P 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
G + + E + + E+ + + +G F+ R +++
Sbjct: 300 GVIQRTLEEIDKEANKEIAEHIQKGQFSFRDLYN 333
>gi|225683542|gb|EEH21826.1| signal recognition particle 54 kDa protein [Paracoccidioides
brasiliensis Pb03]
Length = 500
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 217/301 (72%), Gaps = 1/301 (0%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV+ ++ +IK V L NK+R+IQ+ +F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQSLRKSIKSSVQFSSLPPAVNKKRLIQKTVFDQLVALVDPHC 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKG+ +VIMFVGLQG+GKTTTCTK A ++Q +G++ ALVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGRSNVIMFVGLQGAGKTTTCTKLARHYQTRGFRAALVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV +A EGV FKKE D+IIVDTSGRHKQEA LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVAAEGVAKFKKERFDIIIVDTSGRHKQEADLFAEMTQIQTA 181
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
PD I V+D +IGQAA Q+ AFK + GA+I+TK DG A GGGA+SAVAAT +P+I
Sbjct: 182 IKPDQTILVLDGTIGQAAEIQSSAFKATADFGAIIITKTDGAAAGGGAISAVAATHTPII 241
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTL 330
F+GTGEHM + E F KPF+ +LLGMGD +G ++ + V E + ++ G FTL
Sbjct: 242 FLGTGEHMLDLERFAPKPFIQKLLGMGDMAGLVEHVQAVTKDSATAKETYKHITAGIFTL 301
Query: 331 R 331
R
Sbjct: 302 R 302
>gi|303389022|ref|XP_003072744.1| signal recognition particle protein Srp54 [Encephalitozoon
intestinalis ATCC 50506]
gi|303301886|gb|ADM11384.1| signal recognition particle protein Srp54 [Encephalitozoon
intestinalis ATCC 50506]
Length = 466
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/329 (46%), Positives = 236/329 (71%), Gaps = 4/329 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + + D+ + + EI +L+ ++V + V ++ +K ++
Sbjct: 1 MITELGKSITNTLSNLLRSRATDQDI-EAAIKEICHSLILSNVNPRYVSNLRNELKARLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ +L +LDP + +KGK S+I+FVGLQGSGKTT+ KY
Sbjct: 60 PSGMAPGLNKARVVQNAVYEKLVDLLDPKAKGYKIEKGKTSIIVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F++
Sbjct: 120 ANFYKKKGFKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVAGAGVERFRR 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E ++I+VDTSGRH QE+ LF EM+ + PD ++FVMD+ IGQ+A DQA FK++V+
Sbjct: 179 ERFEVILVDTSGRHTQESELFVEMKDIMREVRPDSIVFVMDAGIGQSAEDQAIGFKKAVN 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG K GGA+S+VAAT P+ F+G GE M++ EVFD + FVSR+LGMGD
Sbjct: 239 VGSIILTKIDGTNKAGGAISSVAATGCPIEFVGNGEGMEDLEVFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G M+K+ E + +D++ E+++KL +G FTL
Sbjct: 299 GLMEKV-ESLGIDEK-EVVRKLKQGKFTL 325
>gi|157134401|ref|XP_001663285.1| signal recognition particle 54 kda protein [Aedes aegypti]
gi|108870487|gb|EAT34712.1| AAEL013076-PA [Aedes aegypti]
Length = 401
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 150/224 (66%), Positives = 183/224 (81%), Gaps = 1/224 (0%)
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTCTK AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV
Sbjct: 8 GSGKTTTCTKLAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVV 67
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAF 230
IA +GV+ FKKE + IIVDTSGRHKQE +LFEEM V+ A PD +IFVMD++IGQA
Sbjct: 68 IAQDGVDMFKKEGFEFIIVDTSGRHKQEESLFEEMLAVATAVKPDNIIFVMDATIGQACE 127
Query: 231 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA+AFK+ V +G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF
Sbjct: 128 AQAKAFKEKVDIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPF 187
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+S+LLGMGD G +DK++E + +D EL+ K+ G FT+R M+
Sbjct: 188 ISKLLGMGDIEGLIDKVNE-LNLDDNEELIDKIKHGQFTIRDMY 230
>gi|396081243|gb|AFN82861.1| signal recognition particle protein Srp54 [Encephalitozoon romaleae
SJ-2008]
Length = 466
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 238/329 (72%), Gaps = 4/329 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + + EI +L+ ++V K V +++ +++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSHTTDQDI-DTAIKEICNSLILSNVNPKYVNDLKNSLRAELD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G NK +++Q A++ L +LDP + +KGK +V++FVGLQGSGKTT+ KY
Sbjct: 60 PKGMPPGFNKAKMVQNAVYERLVDLLDPKTEGYKIEKGKTNVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ+KQNA K K+PF+GS +E DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVKQNALKIKVPFFGS-SEVDPVKVAGAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +LI+VDTSGRH QE+ LF EM+ + P+ ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 EKFELILVDTSGRHTQESELFLEMKDIIREVGPNSIVFVMDAGIGQSAEDQAVGFKRAVD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++++TK+DG +K GGALS+VAATK P+ F+GTGE M++ E+FD + FVSR+LGMGD
Sbjct: 239 VGSILLTKIDGTSKAGGALSSVAATKCPIEFVGTGEGMEDLEMFDARRFVSRMLGMGDVE 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
G M+K+ + +D++ E+++KL +G FTL
Sbjct: 299 GLMEKVGS-LGIDEK-EVVKKLKQGRFTL 325
>gi|290979105|ref|XP_002672275.1| predicted protein [Naegleria gruberi]
gi|284085850|gb|EFC39531.1| predicted protein [Naegleria gruberi]
Length = 484
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 228/302 (75%), Gaps = 3/302 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M+L++L +S A+ + + +++D+K +N+ L EI++ALL+ADV + V ++ IK+
Sbjct: 1 MILSELSSQLSNALLTIHSQSVMDDKSVNKFLKEISKALLEADVNCEQVVQVYNGIKE-- 58
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD+++ N+++ I++ + ELCK+ DPG + P KGK +VI+F+GL+G+GKTTT +K
Sbjct: 59 ELDNMSQDVNRKKNIKRILKKELCKLFDPGVKAIKPVKGKQNVILFIGLRGAGKTTTASK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A +++KKG+K A+V ++TFR GAFD L+ N+ + IPFYG+ E+DP++IA +GVETFK
Sbjct: 119 FAMFYKKKGFKCAIVNSNTFRTGAFDSLRHNSLRDTIPFYGNVFETDPIKIAKDGVETFK 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KEN DLIIVDTS R QE +LFEEM+ +SEA P+ +I VMDS IGQ+ +Q FK +
Sbjct: 179 KENYDLIIVDTSARTIQEESLFEEMKLISEAITPNDIILVMDSKIGQSIKEQVTTFKSRI 238
Query: 241 -SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
++G++I+TK+DGH+KGGGALSA+AATK+P+ FIGTGE+ D + F+V+ FVSRLLG G+
Sbjct: 239 PTLGSIILTKLDGHSKGGGALSAIAATKTPISFIGTGEYYDSLQPFEVEGFVSRLLGEGN 298
Query: 300 WS 301
++
Sbjct: 299 YT 300
>gi|123974885|ref|XP_001314049.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121896072|gb|EAY01234.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 482
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 224/334 (67%), Gaps = 2/334 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I + + A+ +D++ + + ++T AL ADV +V + + I
Sbjct: 1 MVLQDLGEKILAGLSNLGKASKVDDEFVKQYAKDMTNALKAADVSGPIVLQFFKQLISI- 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DL G + ++ I++ L ++DP ++ P KGKP+V MFVGLQGSGKTTTCTK
Sbjct: 60 KVSDLPPGVSIKKHIERETLRLLVDLVDPKVDAYKPTKGKPNVYMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y++K+G+K LV ADTFRAGA +QL QNA +P+Y DP+ +A+ GVE FK
Sbjct: 120 LGLYYKKRGFKVGLVGADTFRAGAREQLMQNAQSVGLPYYVDLVNIDPISVAISGVEKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+E D+IIVDTSG+H QE ALF+EM+++ +A NPD +IFV+D++IGQ+AFDQA AF ++V
Sbjct: 180 RERYDMIIVDTSGKHAQENALFQEMQEMQDAINPDEIIFVLDANIGQSAFDQATAFSKAV 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++I+TK+D KGGGA+SAVAATK P+ F GTGE MD+ E+FD F++ +LG D
Sbjct: 240 DIGSIIMTKLDSGTKGGGAISAVAATKCPIAFYGTGEEMDQLEIFDPNSFIANILGYADP 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
M K+ EVV MD+Q EL Q++ +G + R M+
Sbjct: 300 KALMHKL-EVVDMDKQAELAQRIMKGQYGFREMY 332
>gi|226287163|gb|EEH42676.1| signal recognition particle 54 kDa protein [Paracoccidioides
brasiliensis Pb18]
Length = 530
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/332 (51%), Positives = 223/332 (67%), Gaps = 1/332 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ IDE+ + + EI A F K V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNIDEQAFDAMIKEICAASSPPTSTFASSSLSANPSKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 QFSSLPPAVNKKRLIQKTVFDQLVALVDPHCEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+IIVDTSGRHKQEA LF EM Q+ A PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEADLFAEMTQIQTAIKPDQTILVLDGTIGQAAEIQSSAFKATA 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 241 DFGAIIITKTDGAAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGDM 300
Query: 301 SGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLR 331
+G ++ + V E + ++ G FTLR
Sbjct: 301 AGLVEHVQAVTKDSATAKETYKHITAGIFTLR 332
>gi|159117703|ref|XP_001709071.1| SRP GTPase [Giardia lamblia ATCC 50803]
gi|157437186|gb|EDO81397.1| SRP GTPase [Giardia lamblia ATCC 50803]
Length = 530
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 216/313 (69%), Gaps = 6/313 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG ++ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSNVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPARTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
++ + G N +++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LSDPAIMEGRANTHQVVQRIVVQELVSMLSPERPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T K+PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVKLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
F N +LII+DTSGRH+QE ALF EM+ + A P +FV+DSSIGQAA++QA AF
Sbjct: 181 FVSLNFELIILDTSGRHRQEEALFTEMKLIDSAVQPHDHVFVLDSSIGQAAYEQADAFSN 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG G
Sbjct: 241 AVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDPSRFVSVMLGYG 300
Query: 299 DWSGFMDKIHEVV 311
D G +HE +
Sbjct: 301 DIVG----LHEAM 309
>gi|308162746|gb|EFO65124.1| SRP GTPase [Giardia lamblia P15]
Length = 530
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 216/313 (69%), Gaps = 6/313 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG S+ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSSVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPARTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
++ + G N +++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LSDPAIMEGRANTHQVVQRIVVQELVSMLSPERPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T ++PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVRLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
F N +LII+DTSGRH+QE ALF EM+ + A P +FV+DSSIGQAA++QA AF
Sbjct: 181 FIGLNFELIILDTSGRHRQEEALFTEMKLIDSAVQPHDHVFVLDSSIGQAAYEQADAFSN 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG G
Sbjct: 241 AVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDSSRFVSVMLGYG 300
Query: 299 DWSGFMDKIHEVV 311
D G +HE +
Sbjct: 301 DIVG----LHEAM 309
>gi|333911098|ref|YP_004484831.1| Signal recognition 54 kDa protein [Methanotorris igneus Kol 5]
gi|333751687|gb|AEF96766.1| Signal recognition 54 kDa protein [Methanotorris igneus Kol 5]
Length = 451
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 230/338 (68%), Gaps = 9/338 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG SI++A+ ++ NAT +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 1 MLEKLGESINKALNKIKNATFVDKKLVKEVIKDIQKALIQADVNVKLVLQMSKTIEKRAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L +P PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EETPPKGFSKKEHIIKIVYEELVKLLGEEPKPLELNPKK--QTVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + P+ IA EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKSPIDIAKEGLEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D+II+DT+GRHK+E L EEM+ + E TNPD +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKK--ADVIIIDTAGRHKEEKGLLEEMKMMKEITNPDEIILVIDGTLGQQARNQAKAFKD 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA K+P+ FIGTGE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGDIGSIIVTKLDGSAKGGGALSAVAEIKAPIKFIGTGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
GD ++K E+V ++ E + + G FTL +++
Sbjct: 297 GDLDSLLEKADELVD-EKTEESIDAILRGKFTLNELYA 333
>gi|374635569|ref|ZP_09707165.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Methanotorris formicicus Mc-S-70]
gi|373561871|gb|EHP88096.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Methanotorris formicicus Mc-S-70]
Length = 451
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/338 (47%), Positives = 229/338 (67%), Gaps = 9/338 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG SI++A+ ++ NA +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 1 MLEKLGESINKALNKIKNAAFVDKKLIKEVIKDIQKALIQADVNVKLVLQMSKTIEKRAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EETPPKGFSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QTVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV IA EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKSPVDIAKEGLEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+ + E TNPD +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKK--VDVLIIDTAGRHKEEKGLLEEMKMMKEITNPDEIILVIDGTLGQQARNQAKAFKD 236
Query: 239 SVS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD K F+SRLLGM
Sbjct: 237 AVGDIGSIIVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGIDDLEVFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
GD ++K E+V ++ E + + G FTL +++
Sbjct: 297 GDLDTLLEKADELVD-EKTEESIDAILRGKFTLNELYA 333
>gi|57641421|ref|YP_183899.1| signal recognition particle protein Srp54 [Thermococcus
kodakarensis KOD1]
gi|73919452|sp|Q5JJC8.1|SRP54_PYRKO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|57159745|dbj|BAD85675.1| signal recognition particle, SRP54 subunit [Thermococcus
kodakarensis KOD1]
Length = 448
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 230/337 (68%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE + E + +I RALLQADV KLV ++ I+K
Sbjct: 1 MALEKLGQALNSALKKLARSSTVDEATIKEIVRDIQRALLQADVNVKLVLQLTKQIQKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ AG +K+ I + ++ EL K L KP K KP+VI+ VG+QGSGKTT+
Sbjct: 61 LEEEPPAGVSKKEHIIKIVYEELTKFLGTEAKPLEI--KHKPTVILTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q I +G E D V++A EGVE F
Sbjct: 119 KLARYLQKRGYKVGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEEKDAVKLAREGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+++ D+IIVD++GRHK+E L EEMRQ+SEA P VI V+D +IGQ A++QA AFK++
Sbjct: 179 REKGVDVIIVDSAGRHKEEKGLIEEMRQISEAIKPHEVILVIDGTIGQQAYNQAMAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
G ++KI E+ + + E ++K G F L+ M++
Sbjct: 299 IQGLLEKIEELQKEQEFREEDMEKFLRGKFNLKDMYA 335
>gi|341882493|gb|EGT38428.1| hypothetical protein CAEBREN_28899 [Caenorhabditis brenneri]
gi|341898754|gb|EGT54689.1| hypothetical protein CAEBREN_29982 [Caenorhabditis brenneri]
Length = 376
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 176/213 (82%), Gaps = 1/213 (0%)
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F K
Sbjct: 2 AYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFSK 61
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E ++IIVDTSGRHKQEA+LFEEM QVS A PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 62 EGFEIIIVDTSGRHKQEASLFEEMLQVSNAVQPDNVVFVMDASIGQACEAQARAFSQTVD 121
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FEVF K FV +LLGMGD +
Sbjct: 122 VASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEVFKPKSFVQKLLGMGDIA 181
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
G +D ++++ D + EL+ +L +G FTLR M+
Sbjct: 182 GLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMY 213
>gi|389852998|ref|YP_006355232.1| signal recognition particle protein Srp54 [Pyrococcus sp. ST04]
gi|388250304|gb|AFK23157.1| signal recognition particle protein Srp54 [Pyrococcus sp. ST04]
Length = 443
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 229/337 (67%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDTLGKALSNALKKIARAGSVDEALIKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +++ I + ++ EL K+L +P + KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELTKLLGTEARP--IEIRAKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPKEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + DLIIVDT+GRHK+E L EEMRQ+SEA NP VI V+D +IGQ A++QA AFK++
Sbjct: 179 KSKGVDLIIVDTAGRHKEEKDLIEEMRQISEAINPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMFS 335
G ++K EV ++ E +++ +G FTL+ M++
Sbjct: 299 IQGLLEKFKEVEKEIELSEEDVERFLKGKFTLKDMYA 335
>gi|253741984|gb|EES98841.1| SRP GTPase [Giardia intestinalis ATCC 50581]
Length = 530
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 151/313 (48%), Positives = 216/313 (69%), Gaps = 6/313 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG S+ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSSVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPTRTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
+ + G N ++++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LGDPAIMEGRANTQQVVQRIVVQELVSMLSPDRPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T K+PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVKLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
F N +LII+DTSGRH+QE ALF EM+ + A P +FV+DSSIGQAA++QA AF
Sbjct: 181 FLSLNFELIILDTSGRHRQEEALFTEMKLIDNAVQPHDHVFVLDSSIGQAAYEQADAFSN 240
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG G
Sbjct: 241 AVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDPSRFVSVMLGYG 300
Query: 299 DWSGFMDKIHEVV 311
D G +HE +
Sbjct: 301 DIMG----LHEAM 309
>gi|429965858|gb|ELA47855.1| signal recognition particle protein SRP54 [Vavraia culicis
'floridensis']
Length = 468
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 226/326 (69%), Gaps = 4/326 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG SI+ +Q + + D+ ++ + +I R L+Q +V K V +++ N+ + +
Sbjct: 5 LGKSINSTLQNLFGRDVTDQ-AIDAAIKDIVRQLIQNNVGTKCVTQLKINLDNKIKNEKF 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G NK + + AIF+EL ++DP + K+G+ VIM VGLQG+GKTTT KYA ++
Sbjct: 64 KPGINKAKWVYNAIFDELVNLVDPKCEPYKVKRGRSQVIMLVGLQGAGKTTTVCKYANFY 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+KKG+K +VCADTFRAGAFDQ+KQNA K +P++GS ++ DPV++A+EGVE FKK+ +
Sbjct: 124 KKKGYKAGIVCADTFRAGAFDQIKQNALKINVPYFGS-SDPDPVKVALEGVEKFKKDKFE 182
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+I+VDTSGRH QE LF EM ++ A PD ++FVMD+ IGQ+A QA FK+ V++G++
Sbjct: 183 VILVDTSGRHTQENDLFNEMEEIVNAIAPDNIVFVMDAGIGQSAEHQAMGFKEKVNLGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TK+DG K GGA+S+VA TK P+ FIG+GE MD+ +VF K F++++LG GD G +
Sbjct: 243 ILTKVDGAEKAGGAISSVAITKCPIEFIGSGEGMDDLDVFSPKRFINKILGKGDLEGLAE 302
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLR 331
KI + + +D++ E++ K+ G +TL+
Sbjct: 303 KIKD-LKIDEK-EIVNKIRSGKYTLK 326
>gi|409095092|ref|ZP_11215116.1| signal recognition particle protein Srp54 [Thermococcus zilligii
AN1]
Length = 449
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 226/336 (67%), Gaps = 2/336 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ A IDE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALERLGKALNSALRKLARAGTIDEALIKEVVRDIQRALIQSDVNVRLVLQLTRRIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + R + + ++ EL +L KK KP+V++ VG+QGSGKTTT K
Sbjct: 61 LKEKPPAGMSPREHVIRIVYEELTDLLGKEAVPLEIKK-KPTVLLTVGIQGSGKTTTIAK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+G++ LVC DT+R GA+ QLKQ I +G+ E D +++A EGVE FK
Sbjct: 120 LARYLQKRGYRVGLVCTDTWRPGAYSQLKQLVEPLGIGVFGNPEEKDAIKLAREGVEYFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+IIVDT+GRHK+EA L EEM+Q+S A PD VI V+D +IGQ A++QA AFK++
Sbjct: 180 DKGVDVIIVDTAGRHKEEAGLIEEMKQISSAIQPDEVILVIDGTIGQQAYNQALAFKEAT 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD K FVSRLLG+GD
Sbjct: 240 PIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPKRFVSRLLGLGDI 299
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
++K E+ + + E L+K +G F L+ M++
Sbjct: 300 ESLLEKFEELTQEQEIREEDLEKFLKGKFNLKDMYA 335
>gi|302761688|ref|XP_002964266.1| hypothetical protein SELMODRAFT_81201 [Selaginella moellendorffii]
gi|300167995|gb|EFJ34599.1| hypothetical protein SELMODRAFT_81201 [Selaginella moellendorffii]
Length = 221
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ +V+M VGLQG GKTTTC+K
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELRAMLDAGKPSFTPTKGRTNVVMLVGLQGCGKTTTCSK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT 212
DLII+DTSGRHKQE ALFEEMRQ++ AT
Sbjct: 179 DAKHDLIILDTSGRHKQENALFEEMRQLAAAT 210
>gi|76154974|gb|AAX26359.2| SJCHGC03967 protein [Schistosoma japonicum]
Length = 235
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 186/235 (79%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
++ ++IIVDTSGRH+QE +LFEEM QVS A PD VI+V+D+SIGQA QA A
Sbjct: 181 EDKFEIIIVDTSGRHRQEDSLFEEMLQVSNAIEPDHVIYVLDASIGQACEAQASA 235
>gi|256810320|ref|YP_003127689.1| signal recognition particle protein Srp54 [Methanocaldococcus
fervens AG86]
gi|256793520|gb|ACV24189.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus fervens AG86]
Length = 451
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 230/338 (68%), Gaps = 9/338 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G +K+ I + ++ EL K+L + K +PKK +VI+ VG+QGSGKTTT
Sbjct: 61 KEETPKGLSKKEHIIKIVYEELVKLLGEEAKKLELSPKK--QNVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T++ PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETKTKSPVEIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK+
Sbjct: 179 FKK--ADVLIIDTAGRHKEERGLLEEMKQIKEVTNPDEIILVIDGTIGQQAGIQAKAFKE 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA T +P+ FIG GE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGEIGSIIVTKLDGSAKGGGALSAVAETGAPIKFIGIGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
GD ++K ++V ++ E + + +G FTL + +
Sbjct: 297 GDLDSLLEKAEDMVD-EKTEESIDAIMKGKFTLNELLT 333
>gi|357508655|ref|XP_003624616.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355499631|gb|AES80834.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 321
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 212/335 (63%), Gaps = 45/335 (13%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M LA LGG I R +MSN T+ID+++ C+NEITRA +Q+ ++ KL+R+M IK I+
Sbjct: 1 MGLADLGGRILRGFDKMSNETVIDKEIRKRCVNEITRAFIQSIIEPKLIRDMHAKIKNII 60
Query: 61 ----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
NLDD A R++IQQ PS ++ + + GKTT
Sbjct: 61 YNHLNLDDFDAA---RKMIQQV----------------------PSCLLVLKV-CCGKTT 94
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC ++A ++QKKG K LVC DT R GAFDQLKQ + IP YG R E
Sbjct: 95 TCAQFANHYQKKGLKTGLVCTDTLRNGAFDQLKQIYAETNIPCYGRVGYCQNCR---ERC 151
Query: 177 ETFKKENCDLIIVDTSGRHKQEA-ALFEEMRQVSEATNPDLVIFVMDSSIGQAAFD---- 231
+ NCDLIIVD SG HKQE AL EE+ QVS+AT PDLVI V+D +IGQ AFD
Sbjct: 152 GQMQGGNCDLIIVDVSGGHKQEEDALIEEIHQVSKATKPDLVILVIDGNIGQHAFDHRSL 211
Query: 232 -QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA AF QSV +GAVIV+KMDG+A GGG+LSAVAATKS VIFIGTGEHMDEFEVF+VKPF
Sbjct: 212 KQATAFTQSVDIGAVIVSKMDGYAMGGGSLSAVAATKSSVIFIGTGEHMDEFEVFEVKPF 271
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 325
VS LLGM DW F+D+++EV PEL L E
Sbjct: 272 VSSLLGMDDWYEFIDRVYEV------PELPLNLPE 300
>gi|440492796|gb|ELQ75334.1| Signal recognition particle, subunit Srp54 [Trachipleistophora
hominis]
Length = 468
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 224/326 (68%), Gaps = 4/326 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG SI+ +Q + + D+ + + EI R L+Q +V K V +++ N+ + ++L
Sbjct: 5 LGKSINSTLQNLFKKDVTDQGI-EAAIKEIIRQLIQNNVGTKCVTQLKINLDSKLKTEEL 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G NK + + AIF+EL ++DP + K+GK VIMFVGLQG+GKTTT KYA ++
Sbjct: 64 KPGINKAKWVYNAIFDELVNLVDPKCEPYKVKRGKSQVIMFVGLQGAGKTTTVCKYANFY 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+KKG+K +VCADTFRAGAFDQ+KQNA K +P++GS + DPV++A EGVE F+K+ +
Sbjct: 124 KKKGYKAGIVCADTFRAGAFDQIKQNALKINVPYFGS-ADPDPVKVASEGVEKFRKDKFE 182
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+I+VDTSGRH QE LF EM ++ A P+ ++FVMD+ IGQ+A QA FK+ V++G++
Sbjct: 183 VILVDTSGRHTQENDLFNEMEEIVGAVKPENIVFVMDAGIGQSAEHQAMGFKEKVNLGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TK+DG K GGA+S+VA T P+ FIG GE MD+ +VF + F++++LG GD G +
Sbjct: 243 ILTKVDGAEKAGGAISSVAITGCPIEFIGNGEGMDDLDVFSPRRFINKILGKGDLEGLAE 302
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLR 331
KI + + +D++ E++ K+ G +TL+
Sbjct: 303 KIKD-LKIDER-EIVNKIKSGKYTLK 326
>gi|449690341|ref|XP_002157121.2| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Hydra magnipapillata]
Length = 282
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/296 (53%), Positives = 206/296 (69%), Gaps = 15/296 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ NIK
Sbjct: 1 MVLADLGRKITSALKSLSNATVINEEVLNLMLKEICAALLEADVNVQLVQKLRANIKNAA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++AAG NKRR+IQ +F ELCK++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFEEMAAGTNKRRLIQHTVFQELCKLVDPGVKAWQPIKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK LVCADTFRA + L + + G Y ++A E ++ +
Sbjct: 121 LAYYYQRKGWKTCLVCADTFRADKINILVETINTSGHSHTGEYL----TQLAREAIDFVR 176
Query: 181 -KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K C + T A + MRQ +PD +IFVMD+SIGQA QA+AFK+
Sbjct: 177 CKFGCTVKSFVT-----DNAVDVKSMRQ-----SPDNIIFVMDASIGQACEAQARAFKEK 226
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
V V +VI+TK+DGHAKGGGALSAVA T SP+IFIGTGEH+D+FE F +PFVS+LL
Sbjct: 227 VDVASVIITKLDGHAKGGGALSAVAGTSSPIIFIGTGEHIDDFEPFKTQPFVSKLL 282
>gi|289192492|ref|YP_003458433.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus sp. FS406-22]
gi|288938942|gb|ADC69697.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus sp. FS406-22]
Length = 451
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 225/333 (67%), Gaps = 9/333 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKTAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK ++I+ VG+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNIILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK+
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKE 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
GD ++K ++V ++ E + + G FTL
Sbjct: 297 GDLESLLEKAEDMVD-EKTEESIDAIMRGKFTL 328
>gi|15668272|ref|NP_247065.1| signal recognition particle protein Srp54 [Methanocaldococcus
jannaschii DSM 2661]
gi|2500886|sp|Q57565.1|SRP54_METJA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|1590878|gb|AAB98081.1| signal recognition particle, subunit SRP54 [Methanocaldococcus
jannaschii DSM 2661]
Length = 451
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 225/333 (67%), Gaps = 9/333 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK+
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKE 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
GD ++K ++V ++ E + + G FTL
Sbjct: 297 GDLESLLEKAEDMVD-EKTEESIDAIMRGKFTL 328
>gi|261402637|ref|YP_003246861.1| signal recognition particle protein Srp54 [Methanocaldococcus
vulcanius M7]
gi|261369630|gb|ACX72379.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus vulcanius M7]
Length = 450
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 225/333 (67%), Gaps = 9/333 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDRKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ +G+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLIGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + DPV I EG++
Sbjct: 119 KLARYVQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKDPVEIVKEGMQK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQARIQAKAFKD 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G++IVTK+DG AKGGGALSAVA T++P+ FIG GE +D+ E FD K F+SRLLGM
Sbjct: 237 AVGEIGSIIVTKLDGSAKGGGALSAVAETQAPIKFIGVGEGIDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
GD ++K ++V ++ E + + +G FTL
Sbjct: 297 GDLDSLLEKAEDMVD-EKTEESIDAIMKGKFTL 328
>gi|158430970|pdb|2V3C|C Chain C, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
gi|158430971|pdb|2V3C|D Chain D, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
Length = 432
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 225/335 (67%), Gaps = 9/335 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++ +
Sbjct: 3 KLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEK 62
Query: 65 LAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT K A
Sbjct: 63 TPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAAKLA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVETFKK 181
Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E FKK
Sbjct: 121 RYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV- 240
D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK++V
Sbjct: 181 --ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVG 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGMGD
Sbjct: 239 EIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDL 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
++K ++V ++ E + + G FTL + +
Sbjct: 299 ESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMT 332
>gi|323714481|pdb|3NDB|B Chain B, Crystal Structure Of A Signal Sequence Bound To The Signal
Recognition Particle
Length = 454
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 225/335 (67%), Gaps = 9/335 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++ +
Sbjct: 3 KLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEK 62
Query: 65 LAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT K A
Sbjct: 63 TPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAAKLA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVETFKK 181
Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E FKK
Sbjct: 121 RYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV- 240
D++I+DT+GRHK+E L EEM+Q+ E TNPD +I V+D +IGQ A QA+AFK++V
Sbjct: 181 --ADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVG 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGMGD
Sbjct: 239 EIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDL 298
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
++K ++V ++ E + + G FTL + +
Sbjct: 299 ESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMT 332
>gi|315230023|ref|YP_004070459.1| signal recognition particle [Thermococcus barophilus MP]
gi|315183051|gb|ADT83236.1| signal recognition particle [Thermococcus barophilus MP]
Length = 448
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 223/337 (66%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L LG +++ A+++++ A +DE ++ E + +I RAL+ +DV KLV ++ I+K
Sbjct: 1 MALESLGKALNAALKKLARAGSVDEVLIKEVVRDIQRALIMSDVNVKLVLDLTKKIQKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG ++R I + ++ EL L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGVSRREHIIKIVYEELTNFLGKEAKP--IEIKEKPTILLTVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K LVC+DT+R GA+ QLKQ I +G E D VR+A EGVE F
Sbjct: 119 KLARYFQKRGYKVGLVCSDTWRPGAYHQLKQLVEPYSIEVFGDPNEKDAVRLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVD++GRHK+E +L EEM+Q+S+A NP VI V+D +IGQ A+ QA AFK++
Sbjct: 179 KHKGVDIIIVDSAGRHKEEKSLIEEMKQISDAINPHEVILVIDGTIGQQAYSQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
G ++K E+ + + E L+K G F L+ M++
Sbjct: 299 IQGLLEKFEELSKAQELKEEDLEKFMRGKFNLKDMYA 335
>gi|124365569|gb|ABN09803.1| GTP-binding signal recognition particle SRP54, G-domain [Medicago
truncatula]
Length = 314
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 208/335 (62%), Gaps = 52/335 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M LA LGG I R +MSN T+ID+++ C+NEITRA +Q+ ++ KL+R+M IK I+
Sbjct: 1 MGLADLGGRILRGFDKMSNETVIDKEIRKRCVNEITRAFIQSIIEPKLIRDMHAKIKNII 60
Query: 61 ----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
NLDD A R++IQQ PS GKTT
Sbjct: 61 YNHLNLDDFDAA---RKMIQQV----------------------PSC--------CGKTT 87
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC ++A ++QKKG K LVC DT R GAFDQLKQ + IP YG R E
Sbjct: 88 TCAQFANHYQKKGLKTGLVCTDTLRNGAFDQLKQIYAETNIPCYGRVGYCQNCR---ERC 144
Query: 177 ETFKKENCDLIIVDTSGRHKQEA-ALFEEMRQVSEATNPDLVIFVMDSSIGQAAFD---- 231
+ NCDLIIVD SG HKQE AL EE+ QVS+AT PDLVI V+D +IGQ AFD
Sbjct: 145 GQMQGGNCDLIIVDVSGGHKQEEDALIEEIHQVSKATKPDLVILVIDGNIGQHAFDHRSL 204
Query: 232 -QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 290
QA AF QSV +GAVIV+KMDG+A GGG+LSAVAATKS VIFIGTGEHMDEFEVF+VKPF
Sbjct: 205 KQATAFTQSVDIGAVIVSKMDGYAMGGGSLSAVAATKSSVIFIGTGEHMDEFEVFEVKPF 264
Query: 291 VSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 325
VS LLGM DW F+D+++EV PEL L E
Sbjct: 265 VSSLLGMDDWYEFIDRVYEV------PELPLNLPE 293
>gi|212223269|ref|YP_002306505.1| signal recognition particle protein Srp54 [Thermococcus onnurineus
NA1]
gi|229558607|sp|B6YSS1.1|SRP54_THEON RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|212008226|gb|ACJ15608.1| signal recognition particle, SRP54 subunit [Thermococcus onnurineus
NA1]
Length = 448
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 228/337 (67%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNNALRKLARSSTVDEATIKEVVRDIQRALIQADVNVRLVLDLTKRIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTT+
Sbjct: 61 LEEEPPTGVSKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGIQGSGKTTSIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K LVC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+++ D+IIVD++GRHK+E +L EEM+Q+S A P VI V+D +IGQ A++QA AFK++
Sbjct: 179 REKGVDIIIVDSAGRHKEEKSLIEEMKQISAAIKPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
G ++K E+ + + E L+K +G F L+ M++
Sbjct: 299 IQGLLEKFEELQKQQEFREEDLEKFLKGKFNLKDMYA 335
>gi|336121936|ref|YP_004576711.1| Signal recognition 54 kDa protein [Methanothermococcus okinawensis
IH1]
gi|334856457|gb|AEH06933.1| Signal recognition 54 kDa protein [Methanothermococcus okinawensis
IH1]
Length = 456
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 229/339 (67%), Gaps = 9/339 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
++L +LG +IS A+ ++ NAT +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 6 IMLDKLGQNISSALNKIKNATFVDKKLIKEVIKDIQKALIQADVNVKLVFKMSKEIEKRA 65
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
+D+ G +K+ I + ++ EL K+L + K PKK ++I+ VG+QGSGKTT+
Sbjct: 66 INEDIPKGLSKKEHIIKIVYEELVKLLGEEGQKLELNPKK--QNIILLVGIQGSGKTTSA 123
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVE 177
K A Y QK+G KP L+ AD +R A+ QLKQ A K +P YG T++ P+ IA EG++
Sbjct: 124 AKLARYIQKRGLKPGLIAADIYRPAAYQQLKQLAEKIHVPLYGDETKTKTPMEIAKEGIK 183
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
KK D++I+DT+GRHK+E L EEM+Q+ + NPD +I V+D ++GQ A +QA+AFK
Sbjct: 184 NLKK--MDVLIIDTAGRHKEETGLLEEMKQIKDVVNPDEIILVIDGTLGQQAKNQAKAFK 241
Query: 238 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+V +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE++D+ E FD F+SRLLG
Sbjct: 242 DAVGEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGENVDDLEPFDPNKFISRLLG 301
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
MGD ++K +++ D + E + + +G FTL ++S
Sbjct: 302 MGDLEALLEKTEDLIDEDTE-ESIDAILKGKFTLNELYS 339
>gi|15594157|dbj|BAB64926.1| signal recognition particle protein 54 [Pyrococcus furiosus]
Length = 443
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 230/337 (68%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +++ +++++ A+ +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDNLGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q + I +G+ E D +++A EGV+ F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLRQVLDRYHIEVFGNPQEKDAIKLAKEGVDYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDT+GRHK++ AL EEM+Q+S +P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMFS 335
G ++K E+ ++ + E +++ G FTL+ M++
Sbjct: 299 IQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYA 335
>gi|240104007|ref|YP_002960316.1| signal recognition particle protein Srp54 [Thermococcus
gammatolerans EJ3]
gi|259511389|sp|C5A233.1|SRP54_THEGJ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|239911561|gb|ACS34452.1| Signal recognition particle, subunit SRP54 (srp54) [Thermococcus
gammatolerans EJ3]
Length = 448
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 229/337 (67%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALEKLGKALNSALRKLARSSTVDEALIREVVRDIQRALIQSDVNVRLVLQLTKRIQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
+ AG + R + + ++ EL K+L GK + + + KP++++ VG+QGSGKTTT
Sbjct: 61 LNEKPPAGVSPREHVIKIVYEELTKLL--GKEAVPLEIREKPTILLTVGIQGSGKTTTIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K LVC DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPGEKDAIKLAREGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDT+GRHK+E+ L EEM+Q+SEA P VI V+D +IGQ A+ QA AFK++
Sbjct: 179 KDKGVDVIIVDTAGRHKEESGLIEEMKQISEAIKPHEVILVIDGTIGQQAYHQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
G ++KI E+ + + E ++K G F L+ M++
Sbjct: 299 IQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYA 335
>gi|18978103|ref|NP_579460.1| signal recognition particle protein Srp54 [Pyrococcus furiosus DSM
3638]
gi|397652622|ref|YP_006493203.1| signal recognition particle protein Srp54 [Pyrococcus furiosus
COM1]
gi|23822176|sp|Q8U070.1|SRP54_PYRFU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|211939182|pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
gi|211939183|pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
gi|18893898|gb|AAL81855.1| signal recognition particle protein srp54 [Pyrococcus furiosus DSM
3638]
gi|393190213|gb|AFN04911.1| signal recognition particle protein Srp54 [Pyrococcus furiosus
COM1]
Length = 443
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 230/337 (68%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +++ +++++ A+ +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDNLGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q + I +G+ E D +++A EGV+ F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDT+GRHK++ AL EEM+Q+S +P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMFS 335
G ++K E+ ++ + E +++ G FTL+ M++
Sbjct: 299 IQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYA 335
>gi|223477851|ref|YP_002582335.1| Signal recognition 54kDa protein [Thermococcus sp. AM4]
gi|214033077|gb|EEB73905.1| Signal recognition 54kDa protein [Thermococcus sp. AM4]
Length = 448
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 229/337 (67%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALEKLGKALNSALRKLARSSTVDEALIREVVRDIQRALIQSDVNVRLVLQLTKRIQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
+ AG + R + + ++ EL K L GK + + + KP++++ VG+QGSGKTTT
Sbjct: 61 LNEKPPAGVSPREHVVKIVYEELTKFL--GKEAVPLEIREKPTILLTVGIQGSGKTTTIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K LVC DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPNEKDAIKLAREGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+++ D+IIVDT+GRHK+E+ L EEM+Q+SEA P VI V+D +IGQ A+ QA AFK++
Sbjct: 179 REKGVDVIIVDTAGRHKEESGLIEEMKQISEAIKPHEVILVIDGTIGQQAYHQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
G ++KI E+ + + E ++K G F L+ M++
Sbjct: 299 IQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYA 335
>gi|375083524|ref|ZP_09730543.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|375083969|ref|ZP_09730981.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|374741396|gb|EHR77822.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|374741717|gb|EHR78136.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
Length = 448
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 224/337 (66%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S++ A+++++ A+ +DE ++ E + +I RALL +DV +LV ++ I+K
Sbjct: 1 MVLDKLGQSLNNALRKLARASTVDEALVREVVRDIQRALLTSDVNVRLVLDLTKKIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL L KP K KP++++ VG+QGSGKTT+
Sbjct: 61 LEEKPPAGVSKKEHIIKIVYEELTSFLGKEAKP--IEIKEKPTILLTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK G+K LVC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 119 KLARYFQKHGYKVGLVCSDTWRPGAYFQLKQLVEPYGIEVFGDPEEKDAVKLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK+ D+IIVD++GRHK+E L EEM+Q+S A NP VI V+D +IGQ A++QA AFK++
Sbjct: 179 KKKGVDVIIVDSAGRHKEEKGLIEEMKQISNAINPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
G ++K E+ + E ++K G F L+ M++
Sbjct: 299 IQGLLEKFEELSKETEFTEEDVEKFLRGKFNLKDMYA 335
>gi|189206976|ref|XP_001939822.1| signal recognition particle 54 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975915|gb|EDU42541.1| signal recognition particle 54 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 489
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 219/300 (73%), Gaps = 24/300 (8%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI+ AL++ADV KLV ++ +IK+ V+ LA G NK+R+IQ+A+F+EL KM+DP
Sbjct: 2 VKEISNALVEADVNVKLVMNLRQSIKRTVDFKHLAPGVNKKRLIQKAVFDELVKMVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F P+KGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPRKGKSNVIMFVGLQGAGKTTTCTKLARWYQARGFKACLVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS+T++DPV +A EGVE FKKE ++IIVDTSGRH+QE LF+EM
Sbjct: 122 ATKAKIPYYGSHTQTDPVVVAGEGVEKFKKERFEIIIVDTSGRHRQEKDLFDEM------ 175
Query: 212 TNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 271
AA QA+AFK++ GA+I+TK DG A GGGA+SAVAAT +P++
Sbjct: 176 ----------------AAESQARAFKEAADFGAIIITKTDGAAAGGGAISAVAATHTPIV 219
Query: 272 FIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
F+G GEHM + E F + FVS+LLGMGD G ++ + + + +DQ+ + ++ +++G FT++
Sbjct: 220 FLGNGEHMLDLERFAPQAFVSKLLGMGDVQGLVEHV-QSLKLDQK-DTMKHITQGIFTIK 277
>gi|12230630|sp|O59307.3|SRP54_PYRHO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
Length = 443
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 222/337 (65%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RALLQADV +LV ++ I++
Sbjct: 1 MVLDSLGRALSNALKKIARAGSVDEALVKEVVRDIQRALLQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGVQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAVKLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + DLIIVDT+GRHK+E L EEMR +SE P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KTRDVDLIIVDTAGRHKEEKDLIEEMRMISEEIRPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMFS 335
G ++K E+ ++ E + + G FTL+ M++
Sbjct: 299 IQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYA 335
>gi|14591457|ref|NP_143537.1| signal recognition particle protein Srp54 [Pyrococcus horikoshii
OT3]
gi|3258124|dbj|BAA30807.1| 445aa long hypothetical signal recognition particle protein
[Pyrococcus horikoshii OT3]
Length = 445
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 222/337 (65%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RALLQADV +LV ++ I++
Sbjct: 3 MVLDSLGRALSNALKKIARAGSVDEALVKEVVRDIQRALLQADVNVRLVLKLTKEIQRRA 62
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTTT
Sbjct: 63 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGVQGSGKTTTVA 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 121 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAVKLAKEGVEYF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + DLIIVDT+GRHK+E L EEMR +SE P VI V+D +IGQ A++QA AFK++
Sbjct: 181 KTRDVDLIIVDTAGRHKEEKDLIEEMRMISEEIRPHEVILVIDGTIGQQAYNQALAFKEA 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+GD
Sbjct: 241 TPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLGD 300
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMFS 335
G ++K E+ ++ E + + G FTL+ M++
Sbjct: 301 IQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYA 337
>gi|150399615|ref|YP_001323382.1| signal recognition particle protein Srp54 [Methanococcus vannielii
SB]
gi|166222337|sp|A6UQJ8.1|SRP54_METVS RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150012318|gb|ABR54770.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanococcus vannielii SB]
Length = 450
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 228/339 (67%), Gaps = 11/339 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + +++EL K+L +P K P K SVI+ VG+QGSGKTT+
Sbjct: 61 EEAPPKGFSKKEHIIKIVYDELVKLLGENPQKLELDP--SKKSVILLVGIQGSGKTTSSA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A Y QKKG KPAL+ AD +R A+ QLKQ + K +P +G T++ PV I EG+E
Sbjct: 119 KLARYIQKKGMKPALIAADIYRPAAYQQLKQLSEKINVPLFGDETKTKTPVEIVKEGIEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
KK D++I+DT+GRHK+E +L EEM+Q+ E TNP+ +I V+D ++GQ A +QA+AFK
Sbjct: 179 LKK--SDVLIIDTAGRHKEEESLLEEMKQMKEITNPNEIILVIDGTLGQQAKNQAKAFKD 236
Query: 239 SVS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+VS +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SRLLGM
Sbjct: 237 AVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLETFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQ-PELLQKLSEGNFTLRIMFS 335
GD ++K +V MD+ E + + +G FTL +++
Sbjct: 297 GDLDSLLEKTEDV--MDESTEESIDSILKGKFTLVELYA 333
>gi|402466990|gb|EJW02377.1| signal recognition particle protein SRP54 [Edhazardia aedis USNM
41457]
Length = 466
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/331 (45%), Positives = 231/331 (69%), Gaps = 8/331 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ +G I+ ++ + + DE + N + E+ LL A+V KL+ ++ NIKK +
Sbjct: 1 MLSDVGRKITTSLNDLFSTQNTDETIEN-VIKEVCTQLLNANVSPKLLLTLRKNIKK--D 57
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++L G NK + Q I +E+ +LDPG KP KK ++++FVGLQG GKTTT K
Sbjct: 58 MENLPPGINKAKHCHQKIVSEIVNLLDPGTKPPELSKKS-VNIVLFVGLQGCGKTTTVCK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA ++QK+ +K +VCADTFRAGAFDQ+KQNA K K+P+YGS E DPV++A +GVE F
Sbjct: 117 YANFYQKQKFKVGIVCADTFRAGAFDQIKQNALKIKVPYYGS-EEKDPVKVARKGVEKFV 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E +LI++D+SGR+ QE LF+EM+Q+ A P ++FVMD+ IGQAA QA+ F +
Sbjct: 176 NEKFNLILIDSSGRNTQEKELFDEMQQIISAVTPTNIVFVMDAGIGQAAESQAKGFSDAT 235
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++G++I+TK+DG K GGAL++VA TK PV F+G+GE+M++F+ FDVK FV+++LG+GD
Sbjct: 236 NIGSIILTKIDGTKKAGGALTSVATTKCPVEFVGSGENMEDFDKFDVKRFVNKMLGLGDI 295
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++K+ + +D++ L++K+ G FTL+
Sbjct: 296 EGLVEKVSS-LNIDEKA-LMKKVETGTFTLK 324
>gi|242399400|ref|YP_002994824.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
gi|242265793|gb|ACS90475.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
Length = 453
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 227/337 (67%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S++ A+++++ A+ +DE ++ + + +I RAL+ +DV +LV ++ I+K
Sbjct: 6 MVLDKLGQSLNNALKKLARASTVDEALVRDVVRDIQRALITSDVNVRLVLDLTKKIEKRA 65
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL L KP K KP+V++ VG+QGSGKTT+
Sbjct: 66 LEEKPPAGVSKKEHIVKIVYEELTNFLGKEAKP--VEIKAKPTVLLTVGIQGSGKTTSVA 123
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K + Y QK G+K +VC+DT+R GA+ QLKQ I +G+ E + +++A EGVE F
Sbjct: 124 KLSRYFQKHGYKVGVVCSDTWRPGAYQQLKQLIEPYGIEVFGNPEEKNAIKLAKEGVEYF 183
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK+ D+IIVD++GRHK+E L EEMRQ+S NP VI ++D +IGQ A++QA AFK++
Sbjct: 184 KKKGVDVIIVDSAGRHKEEKGLIEEMRQISNTINPHEVILIIDGTIGQQAYNQALAFKEA 243
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 244 TPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 303
Query: 300 WSGFMDKIHEVVP-MDQQPELLQKLSEGNFTLRIMFS 335
G ++K E+ ++ + E ++K +G F L+ M++
Sbjct: 304 IQGLLEKFEELSKEVEFKEEDMEKFLKGKFNLKDMYA 340
>gi|14520695|ref|NP_126170.1| signal recognition particle protein Srp54 [Pyrococcus abyssi GE5]
gi|12230641|sp|Q9V1E8.1|SRP54_PYRAB RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|5457911|emb|CAB49401.1| srp54 signal recognition particle, subunit SRP54 [Pyrococcus abyssi
GE5]
gi|380741228|tpe|CCE69862.1| TPA: signal recognition particle protein Srp54 [Pyrococcus abyssi
GE5]
Length = 443
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 224/337 (66%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDSLGKALSNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGVQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + DLIIVDT+GRHK+E L EEMR +S P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KAKGVDLIIVDTAGRHKEEKDLIEEMRMISNEIKPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+D AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFVSRLLGLGD 298
Query: 300 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMFS 335
G ++K E+ ++ E L++ +G FTL+ M++
Sbjct: 299 IQGLLEKFKELEKEVEFTEEDLERFLKGKFTLKDMYA 335
>gi|365757890|gb|EHM99761.1| Srp54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 427
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 174/226 (76%)
Query: 105 MFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYT 164
MFVGLQGSGKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYT
Sbjct: 1 MFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYT 60
Query: 165 ESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSS 224
E+DP ++A EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S P+ I V+D+S
Sbjct: 61 ETDPAKVAEEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMVEISNVIRPNQTIMVLDAS 120
Query: 225 IGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 284
IGQAA Q++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E
Sbjct: 121 IGQAAEQQSKAFKESSDFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEK 180
Query: 285 FDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
F K F+S+LLG+GD +++ V + ++ + +G FTL
Sbjct: 181 FSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTL 226
>gi|341582011|ref|YP_004762503.1| signal recognition particle protein Srp54 [Thermococcus sp. 4557]
gi|340809669|gb|AEK72826.1| signal recognition particle protein Srp54 [Thermococcus sp. 4557]
Length = 448
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 229/337 (67%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ + +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNSALKKLARSKTVDEATIKEVVRDIQRALIQADVNVRLVLQLTKTIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
++ AG +K+ I Q ++ EL K L GK S + K KP+V++ VG+QGSGKTT+
Sbjct: 61 LEEEPPAGASKKEHIIQIVYEELTKFL--GKESKPLEIKEKPTVLLTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QLKQ I G E D V++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGVVCSDTWRPGAYYQLKQLLEPYGIEVSGDPEEKDAVKLAYEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K ++ D+IIVD++GRHK+E+ L EEM+Q+S+A P VI V+D +IGQ A++QA AFK++
Sbjct: 179 KGKDVDVIIVDSAGRHKEESGLIEEMKQISQAIKPHEVILVIDGTIGQQAYNQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLGMGD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEAFDPKRFVSRLLGMGD 298
Query: 300 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
G ++K+ E+ E L+K +G F L+ M++
Sbjct: 299 IEGLLEKLEELQKQQAVSEEDLEKFLKGKFNLKDMYA 335
>gi|390960743|ref|YP_006424577.1| signal recognition particle protein SRP54 [Thermococcus sp. CL1]
gi|390519051|gb|AFL94783.1| signal recognition particle protein SRP54 [Thermococcus sp. CL1]
Length = 448
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 227/336 (67%), Gaps = 2/336 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ + +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNSALKKLARSRTVDEATIKEVVRDIQRALIQADVNVRLVLQLTKTIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG +K+ I Q ++ EL K L K+ KP+V++ VG+QGSGKTT+ K
Sbjct: 61 LEEEPPAGVSKKEHIIQIVYEELTKFLGKEAKPLEIKE-KPTVLLTVGIQGSGKTTSVAK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + QK+G+K +VC+DT+R GA+ QLKQ I G E D V++A EGV+ F+
Sbjct: 120 LARHLQKRGYKVGVVCSDTWRPGAYYQLKQLLEPYGIEVAGDPEEKDAVKLAREGVKYFR 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ D+IIVD++GRHK+E L EEMRQ+SEA P VI V+D +IGQ A++QA AFK++
Sbjct: 180 EKGVDVIIVDSAGRHKEEKGLIEEMRQISEAIKPHEVILVIDGTIGQQAYNQALAFKEAT 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLGMGD
Sbjct: 240 PIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEAFDPKRFVSRLLGMGDI 299
Query: 301 SGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMFS 335
G ++K+ E+ + + E L+K +G F L+ M++
Sbjct: 300 EGLLEKLEELQKQQEFKEEDLEKFLKGKFNLKDMYA 335
>gi|332157931|ref|YP_004423210.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
gi|331033394|gb|AEC51206.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
Length = 443
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 224/336 (66%), Gaps = 2/336 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV + I++
Sbjct: 1 MVLDTLGKALSNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLNLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG +++ I + ++ EL K L ++ KP++++ VG+QGSGKTTT K
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELTKFLGTEARPIEIRE-KPTILLMVGVQGSGKTTTVAK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGV+ FK
Sbjct: 120 LARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPQEKDAIKLAREGVKHFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ DLIIVDT+GRHK+E L EEMRQ+SEA NP VI V+D +IGQ A++QA AFK++
Sbjct: 180 EKGVDLIIVDTAGRHKEEKNLIEEMRQISEAINPHEVILVIDGTIGQQAYNQALAFKEAT 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+GD
Sbjct: 240 PIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDIEPFDPARFVSRLLGLGDI 299
Query: 301 SGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMFS 335
G ++K E+ + E L++ G FTL+ M++
Sbjct: 300 QGLLEKFKEIEKEIEIKEEDLERFLRGKFTLKDMYA 335
>gi|312137225|ref|YP_004004562.1| signal recognition particle subunit ffh/srp54 (srp54)
[Methanothermus fervidus DSM 2088]
gi|311224944|gb|ADP77800.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanothermus fervidus DSM 2088]
Length = 449
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 217/332 (65%), Gaps = 6/332 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + ++I++++ I+DEKV+ E + ++ RAL+QADV KLV ++ +I+K
Sbjct: 7 MLGKLGEKLRKSIKKLAKMPIVDEKVVKEVIKDLQRALIQADVNVKLVFKLSKSIEKRAL 66
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ EL K+L GK S+ K KP I+FVGLQGSGKTTT K
Sbjct: 67 KEEPPKGITPKEHVIKIVYEELTKLL--GKKSYKLKIDKKPYKILFVGLQGSGKTTTVAK 124
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y + KG+ A+VC DT+R A+DQLKQ + +P YG E +P+R+A EG+ FK
Sbjct: 125 LAHYLRLKGYNSAVVCTDTWRTAAYDQLKQLTEEINVPMYGDPNEDNPIRLAKEGLNKFK 184
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
N D+I+ DT+GRHK E L +EM +S+ NPD +I V+D +IGQ A QA+AF + V
Sbjct: 185 --NYDVILFDTAGRHKNEKELLDEMEMLSKEINPDEIILVIDGTIGQQAKSQAKAFSERV 242
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAV+ +P+ FIGTGE +D+ E FD F+SRLLGMGD
Sbjct: 243 KIGSIIVTKLDGSAKGGGALSAVSEVGAPIKFIGTGEKIDDLEEFDPARFMSRLLGMGDI 302
Query: 301 SGFMDKIHEVV-PMDQQPELLQKLSEGNFTLR 331
++K VV D+ E + + G FTL+
Sbjct: 303 KSLIEKFERVVEEEDKISETVDTMLSGKFTLK 334
>gi|337283719|ref|YP_004623193.1| signal recognition particle protein Srp54 [Pyrococcus yayanosii
CH1]
gi|334899653|gb|AEH23921.1| signal recognition particle protein Srp54 [Pyrococcus yayanosii
CH1]
Length = 443
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 226/337 (67%), Gaps = 4/337 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MALDALGRALSNALKKIARAGTVDETLVKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +++ I + ++ EL K+L KP K KP +++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELSKLLGSEAKP--IEIKEKPMILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QL+Q + +G+ E D V++A EGVE F
Sbjct: 119 KLARHFQKRGYKVGVVCSDTWRPGAYHQLRQLLDPYHVEVFGNPEEKDAVKLAREGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+ + D+IIVDT+GRHK+E L EEMRQ+SEA P VI V+D +IGQ A+ QA AFK++
Sbjct: 179 RGKGVDIIIVDTAGRHKEEKGLIEEMRQISEAIRPHEVILVIDGTIGQQAYSQALAFKEA 238
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMFS 335
G ++K E+ + E +++ +G FTL+ M++
Sbjct: 299 IQGLLEKFEELEKEVEFSEKDVERFLKGKFTLKDMYA 335
>gi|269860268|ref|XP_002649856.1| signal recognition particle subunit FFH/SRP54 [Enterocytozoon
bieneusi H348]
gi|220066696|gb|EED44169.1| signal recognition particle subunit FFH/SRP54 [Enterocytozoon
bieneusi H348]
Length = 475
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 225/336 (66%), Gaps = 10/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
+L LG I +Q + I D V++ + +I LLQ +V K V E++ N+ +KI
Sbjct: 7 FMLKDLGNFIGNRLQNLFCVQITDS-VISNLIKDICTQLLQNNVNPKYVFELRKNLNQKI 65
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
N NK +IIQQ +F+ L +++DP + KG+ VI+FVGLQGSGKTT+
Sbjct: 66 NNQISNQTNKNKIKIIQQTVFDCLSELIDPQVSPYKISKGEQHVIVFVGLQGSGKTTSIC 125
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY----TESDPVRIAVEG 175
KYA +++ KG+K +VCADTFRAGA+DQ+KQNA K + ++G+ TE DPV IA +G
Sbjct: 126 KYARFYRSKGFKVGIVCADTFRAGAYDQIKQNANKINVAYWGNQDEDNTEVDPVSIARKG 185
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQA 235
V FK+ + +LI+VDTSGRH Q LF E++ + + NP+ +IFV+D+ IGQ+A DQ Q
Sbjct: 186 VSHFKRHDYELILVDTSGRHVQSEDLFLEIQNLVTSINPNNIIFVIDAGIGQSAEDQVQG 245
Query: 236 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
FK+++++G +I+TK+DG K GGALS++A TK PV FIGTGE M++FE F+ K F+S+LL
Sbjct: 246 FKKAINIGGIILTKIDGAEKAGGALSSIAVTKCPVEFIGTGEKMEDFERFNSKIFISKLL 305
Query: 296 GMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTL 330
G+ ++ G +++I V +D P E+ KL++G FTL
Sbjct: 306 GIPNFEGMLEQI---VDLDLNPDEISSKLAQGRFTL 338
>gi|150401682|ref|YP_001325448.1| signal recognition particle protein Srp54 [Methanococcus aeolicus
Nankai-3]
gi|166222333|sp|A6UWG4.1|SRP54_META3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150014385|gb|ABR56836.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus aeolicus Nankai-3]
Length = 450
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 226/338 (66%), Gaps = 9/338 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG +I+ A+ ++ NAT +D+K++ E + +I +AL+QADV KLV M I++
Sbjct: 1 MLDKLGSNINNALSKIKNATFVDKKLVKEVIKDIQKALIQADVNVKLVFAMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + +++EL K+L + K PK ++I+ VG+QGSGKTT+
Sbjct: 61 YESAPKGLSKKDHIIKIVYDELVKLLGEEGQKLELDPKN--KNIILLVGIQGSGKTTSAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A QK+G+KPAL+ AD +R A+ QLKQ + K IP +G T++ P+ I EG++
Sbjct: 119 KLARTLQKRGFKPALIAADVYRPAAYQQLKQLSEKIHIPLHGDPTKTKTPMEITEEGLKQ 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
FKK D+II+DT+GRHK+E+ L EEM+++ E NP+ +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKKN--DVIIIDTAGRHKEESGLLEEMKEMKEKFNPEEIILVIDGTLGQQAKNQAKAFKD 236
Query: 239 SV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V ++G++++TKMDG AKGGGALSAVA +P+ FIGTGE +D+ E FD K F+SRLLGM
Sbjct: 237 AVENIGSILITKMDGSAKGGGALSAVAEIGAPIKFIGTGEKVDDLEPFDPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
GD ++K +++ D E L + G FTL ++S
Sbjct: 297 GDLDSLLEKTEDIID-DDTEESLDAMMRGKFTLNELYS 333
>gi|145494914|ref|XP_001433451.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400568|emb|CAK66054.1| unnamed protein product [Paramecium tetraurelia]
Length = 436
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 214/331 (64%), Gaps = 9/331 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG SI + +++ I+E V+++ LNEI+ AL + DV L++E++ NI+
Sbjct: 1 MVLTELGQSIKGVLNKLNQPQQINEVVVDQILNEISIALQKTDVNESLIQELRENIRLEF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L L N +R++Q++I EL K+L SF PKKG+P+V+M +GL+GSGKT+TC K
Sbjct: 61 KLH-LLEFINLQRLLQKSIIEELTKLLQNDIMSFQPKKGQPNVMMLIGLKGSGKTSTCFK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYY QK+GWK ++CA + + D +KQ A K K+ FYGSY ESDPV +GV+ FK
Sbjct: 120 YAYYFQKRGWKVGIICAGSSQLQEIDWVKQQAKKIKVLFYGSYFESDPVNATQDGVQIFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
KE D+I++DT G++++E L +EM+Q+ PD +IFVMDSSIGQ DQ FK +
Sbjct: 180 KEGIDIILIDTVGKYEKETDLCKEMKQMEYMIQPDNIIFVMDSSIGQICQDQVFVFKSAF 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ G++I+TK+D H+KGGGA+SAV AT +P+ FI GE ++ F F+S+LLG D
Sbjct: 240 NQGSIIITKVDRHSKGGGAISAVVATNTPIDFICNGEGHEDLLEFQSSQFISKLLGFEDL 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLR 331
G ++K++ V + + E FTLR
Sbjct: 300 KGLLNKLNSFVSIGPK--------EKQFTLR 322
>gi|297619646|ref|YP_003707751.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanococcus voltae A3]
gi|297378623|gb|ADI36778.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanococcus voltae A3]
Length = 450
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 225/338 (66%), Gaps = 9/338 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG +IS A+ ++ +AT++D+K++ E + +I +AL+Q+DV KLV +M +I+K
Sbjct: 1 MLDKLGQNISTALNKIKSATLVDKKLIKEVIKDIQKALIQSDVNVKLVLKMSKDIEKKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G K+ I Q ++NEL +++ +P K P K S+I+ VG+QGSGKTT+
Sbjct: 61 EENPPKGLTKKEHIIQIVYNELVQLIGNEPQKLDLDP--SKKSIILLVGIQGSGKTTSSA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A QK+G KPAL+ AD +R A+ QL+Q A K +P YG T + P+ IA +G+
Sbjct: 119 KLARLIQKRGLKPALIAADVYRPAAYKQLQQLAEKINVPLYGDETRTKTPIEIAKDGLNK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
KK D+ I+DT+GRHK+E+ L EM+++ + NP ++ V+D ++GQ A +QA+AFK
Sbjct: 179 LKK--ADVFIIDTAGRHKEESGLLTEMKELKDELNPKEIVLVIDGTLGQQAKNQAKAFKD 236
Query: 239 SVS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
+V +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D+ E F+ K F+SRLLGM
Sbjct: 237 AVEDIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDDLETFEPKKFISRLLGM 296
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
GD ++K ++V + E ++ + +G FTL ++S
Sbjct: 297 GDLDSLLEKTDDIVE-EANEEDIEAILKGKFTLVELYS 333
>gi|150402723|ref|YP_001330017.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C7]
gi|166222336|sp|A6VHE0.1|SRP54_METM7 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150033753|gb|ABR65866.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus maripaludis C7]
Length = 450
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 219/337 (64%), Gaps = 7/337 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL +L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVNLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRHK+E L EMR++ + TNP +I V+D ++GQ A +QA+AFK+SV
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMREMKDLTNPTEIILVIDGTLGQQAKNQAKAFKESV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LGMGD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGMGD 298
Query: 300 WSGFMDKIHEVVPMDQQ-PELLQKLSEGNFTLRIMFS 335
++K ++ MD+ E + + +G FTL +++
Sbjct: 299 LDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYA 333
>gi|91772216|ref|YP_564908.1| signal recognition particle protein Srp54 [Methanococcoides
burtonii DSM 6242]
gi|121686981|sp|Q12ZG8.1|SRP54_METBU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|91711231|gb|ABE51158.1| signal recognition particle SRP54 [Methanococcoides burtonii DSM
6242]
Length = 439
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 211/335 (62%), Gaps = 8/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDEK + E + +I RALLQADV KLV +M ++IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVGAGRIDEKTVTEVVKDIQRALLQADVNVKLVMQMSSHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ G N R + + ++ EL ++ G+ + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPPGMNPREHVIKIVYQELISIV--GRSADIPLK--PQTIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ Y Q+KG KPA++CADTFR GA+ QLK K +PFYG D V I G+
Sbjct: 117 LSRYFQRKGLKPAVICADTFRPGAYQQLKTLCDKLNVPFYGEVGNPDAVGIVERGLAELG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D++IVDT+GRH EA L +EM Q+ E PD + V+D +IGQ A +QA+AF SV
Sbjct: 177 KN--DVLIVDTAGRHSLEADLIDEMEQIHEIAQPDYKLLVLDGAIGQQASEQARAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+++K+DG AKGGGALSAV+ T S + FIG GE D+ E F+ F+SRLLGMGD
Sbjct: 235 GISGVVISKLDGTAKGGGALSAVSETNSAIAFIGVGETPDDLEKFEPDRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
++K E + ++ ++ + G FTL+ M+S
Sbjct: 295 KSLIEKAEET--LSEEDIDMEAMMRGRFTLKDMYS 327
>gi|326519590|dbj|BAK00168.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/177 (76%), Positives = 156/177 (88%), Gaps = 2/177 (1%)
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLV 217
P Y +TE DPV+IAVEG+E F++E DLII+DTSGRH QEAALFEEMRQV+EAT PDLV
Sbjct: 7 PRY-PFTE-DPVKIAVEGLEKFRQEKSDLIIIDTSGRHMQEAALFEEMRQVAEATKPDLV 64
Query: 218 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 277
IFVMD SIGQAAFDQAQAFKQS SVGAVIVTK+DGHAKGGGALSAVAATKSPVIFIGTGE
Sbjct: 65 IFVMDGSIGQAAFDQAQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 124
Query: 278 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
H+D+F+VF+V+PFV+RLLG GD G +DK+ +VP DQQ EL+ KLSEG FTLR+++
Sbjct: 125 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLY 181
>gi|159905503|ref|YP_001549165.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C6]
gi|238686963|sp|A9A9B0.1|SRP54_METM6 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|159886996|gb|ABX01933.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus maripaludis C6]
Length = 450
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 219/337 (64%), Gaps = 7/337 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETIQKLELDASKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRHK+E L EM+++ + TNP+ +I V+D ++GQ A +QA+AFK SV
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKDSV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG GD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGFGD 298
Query: 300 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMFS 335
++K ++ MD+ E + + +G FTL +++
Sbjct: 299 LDSLLEKTEDI--MDESAEESIDSILKGKFTLIELYA 333
>gi|429961678|gb|ELA41223.1| hypothetical protein VICG_01712 [Vittaforma corneae ATCC 50505]
Length = 399
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 129/260 (49%), Positives = 193/260 (74%), Gaps = 3/260 (1%)
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
+++++ + F L + LDPG + +K K +V++FVGLQG GKTT+ KYA +++KKG+
Sbjct: 4 RQKVVHRIFFETLVRFLDPGSKPYEIQKEKSNVVVFVGLQGCGKTTSICKYANFYKKKGF 63
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
+ +VCADTFRAGAFDQ+KQNA+K IP++GS + DPV++A EGV F+K + +LI+VD
Sbjct: 64 RVGIVCADTFRAGAFDQIKQNASKIGIPYFGS-PDPDPVKVAKEGVSKFRKNDFELILVD 122
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
TSGRH QE ALF EMR + +A PD ++FVMD+ IGQ+A +QA FK +V VG +I+TK+
Sbjct: 123 TSGRHTQEEALFAEMRDLVDAICPDNIVFVMDAGIGQSAEEQAAGFKNAVKVGGIILTKI 182
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
DG +K GGALS+VA T+ P+ F+GTGE MD+ E F+ + FV ++LGMGD G ++++
Sbjct: 183 DGASKAGGALSSVATTQCPIEFVGTGEGMDDIEKFNARRFVGKMLGMGDIDGLIERLSS- 241
Query: 311 VPMDQQPELLQKLSEGNFTL 330
+ +D++ ++++KL+ G F L
Sbjct: 242 IEIDKE-DVIEKLTTGKFRL 260
>gi|333988486|ref|YP_004521093.1| Signal recognition 54 kDa protein [Methanobacterium sp. SWAN-1]
gi|333826630|gb|AEG19292.1| Signal recognition 54 kDa protein [Methanobacterium sp. SWAN-1]
Length = 443
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 212/334 (63%), Gaps = 3/334 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ +IID++V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLDNLGKNLTNTMKKLAGMSIIDKEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + + + ++ EL ++ K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEEPPKGVTPKEHVIKIVYEELVNLVGEKAQEVEIDK-KPYKILFVGLQGSGKTTTIGKI 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ Y QKKG+ PA++C DT+R A++QL+Q +P YG D + +A +G+ FKK
Sbjct: 120 SRYLQKKGFNPAIICTDTWRPAAYEQLRQLTENMNLPLYGDPENKDALDLAKKGLNEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ DLIIVDT+GRHK+E L +EM ++S PD VI V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEEISAIVKPDEVILVIDGTIGQQAREQALAFSKTTK 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++I+TK+DG AKGGGALSAVA +P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 238 IGSIIITKLDGSAKGGGALSAVAEIGAPIKFIGTGERVDDFEAFDPERFISRLLGMGDIR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
++K E+ D + + + G FTL+ M+S
Sbjct: 298 SLIEKAEEIAKDDIDMDSVDAMMSGKFTLKDMYS 331
>gi|452209852|ref|YP_007489966.1| Signal recognition particle, subunit Ffh SRP54 [Methanosarcina
mazei Tuc01]
gi|452099754|gb|AGF96694.1| Signal recognition particle, subunit Ffh SRP54 [Methanosarcina
mazei Tuc01]
Length = 443
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 205/335 (61%), Gaps = 8/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEDPPAGMNPREHVIRIVYQELMEIIGKG----ADIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK + K + FYG D V I + G++
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFYGEEGNPDAVEITIHGLKAL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH EA L EEM ++ PD V+D+ IGQ A QA AF SV
Sbjct: 176 -EKYDIKIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
M+K E + ++ ++ L +G FTL+ M++
Sbjct: 295 KSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMYN 327
>gi|410722282|ref|ZP_11361588.1| signal recognition particle GTPase [Methanobacterium sp. Maddingley
MBC34]
gi|410597317|gb|EKQ51944.1| signal recognition particle GTPase [Methanobacterium sp. Maddingley
MBC34]
Length = 443
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 216/334 (64%), Gaps = 3/334 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ +++++ TIIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLGNLGKNLTKTMKKLAGMTIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + + + +++EL +L +K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEEPPKGVTAKEHVIKIVYDELVHLLGDKAAEVEIEK-KPYKILFVGLQGSGKTTTIGKM 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG+ PA++C DT+R A++QL+Q + YG +D + +A +G++ FKK
Sbjct: 120 ARYLQKKGFNPAIICTDTWRPAAYEQLRQLTENLNLSLYGDPNNNDALDLAQKGLKEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ DLIIVDT+GRHK+E L +EM Q+S PD V+ V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEQISAVVEPDEVMLVIDGTIGQQAKEQALAFSKTTK 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++++TK+DG AKGGGALSAV+ +P+ FIGTGE +++ EVFD + F+SRLLGMGD
Sbjct: 238 IGSIVITKLDGSAKGGGALSAVSEIGAPIKFIGTGERIEDLEVFDPERFISRLLGMGDIR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
+++ E+ D E + + G FTL+ M+S
Sbjct: 298 SLIERAEEIAEEDVDTEAMDAMLSGKFTLKDMYS 331
>gi|21227369|ref|NP_633291.1| signal recognition particle protein Srp54 [Methanosarcina mazei
Go1]
gi|23822172|sp|Q8PXF3.1|SRP54_METMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|20905728|gb|AAM30963.1| signal recognition particle subunit FFH/SRP54 [Methanosarcina mazei
Go1]
Length = 443
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 204/334 (61%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEDPPAGMNPREHVIRIVYQELMEIIGKG----ADIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK + K + FYG D V I + G++
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFYGEEGNPDAVEITIHGLKAL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH EA L EEM ++ PD V+D+ IGQ A QA AF SV
Sbjct: 176 -EKYDIKIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
M+K E + ++ ++ L +G FTL+ M+
Sbjct: 295 KSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMY 326
>gi|435850492|ref|YP_007312078.1| signal recognition particle GTPase [Methanomethylovorans hollandica
DSM 15978]
gi|433661122|gb|AGB48548.1| signal recognition particle GTPase [Methanomethylovorans hollandica
DSM 15978]
Length = 439
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 213/335 (63%), Gaps = 10/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LGGS+ A++++ + IDE +NE + +I RA+LQADV KLV M +IK+
Sbjct: 1 MVMEKLGGSLQDALKKLVKSGRIDEHTVNEVVKDIQRAMLQADVNVKLVMTMSNHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D+ +G N R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 MKEDVPSGMNPREHVIRIVYQELINII--GKGTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG +PA++CADTFR GA+ QLK K + FYG D V I G++ +
Sbjct: 117 LARYFQRKGLRPAVICADTFRPGAYQQLKTLCGKLNVTFYGEEGNPDAVGIVERGLKEVE 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRH E L EEM Q+ +PD + V+D +IGQ A +QA+AF S+
Sbjct: 177 K--YDVIIIDTAGRHSLEKDLIEEMEQIHAIAHPDYKLLVLDGAIGQQASEQARAFNDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+++K+DG AKGGGA+SAV+ T S + FIG GE ++ E F+ F+S+LLGMGD
Sbjct: 235 GISGVVISKLDGTAKGGGAISAVSETNSSIAFIGVGETPEDLEKFESDRFISKLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMF 334
G ++K E + ++ EL ++ + G FTL+ M+
Sbjct: 295 QGLIEKAQENL---KEEELDMEAMMRGRFTLKDMY 326
>gi|387594285|gb|EIJ89309.1| signal recognition particle 54 kDa subunit [Nematocida parisii
ERTm3]
gi|387595031|gb|EIJ92658.1| signal recognition particle 54 kDa subunit [Nematocida parisii
ERTm1]
Length = 477
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/330 (44%), Positives = 213/330 (64%), Gaps = 2/330 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ LG IS A+ + EK LN+ + +IT +LL ++V ++V ++ I +
Sbjct: 1 MLSDLGAGISNALHGFFGSKE-GEKELNDAIKKITTSLLGSNVNTRVVLNVRKRILERFK 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ K + +Q+ +F ELC ++D GK F PKK + S ++FVGLQGSGKTTTC KY
Sbjct: 60 PHEIPTKSAKEKALQRIVFEELCAIMDSGKEPFKPKKKEVSTVLFVGLQGSGKTTTCCKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++G+K +VCADTFRAGA++Q+KQN I + S + DP +A G K+
Sbjct: 120 AKYYKQRGFKVGIVCADTFRAGAYEQVKQNVQGMNIEVFISDSSVDPAVVAKTGASALKE 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
C+L++VDTSGRH QE LF+EM ++ EA NP IFV+D+SIGQ A A++F V
Sbjct: 180 SGCNLVLVDTSGRHTQEGELFKEMEEIVEAINPTATIFVVDASIGQTAETHARSFMSRVK 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G+VI+TK DG GGAL +VA TK+PV FIGTGE M + E F+ K FV RL+G+GD S
Sbjct: 240 LGSVIITKTDGTKNIGGALCSVAETKTPVAFIGTGEGMTQIESFNPKGFVGRLMGLGDIS 299
Query: 302 GFMDKIHEV-VPMDQQPELLQKLSEGNFTL 330
F +KI + + ++Q EL+ K+ G F++
Sbjct: 300 SFAEKIEGLNISPEKQEELIGKIKAGEFSI 329
>gi|408380979|ref|ZP_11178529.1| signal recognition particle protein Srp54 [Methanobacterium
formicicum DSM 3637]
gi|407816244|gb|EKF86806.1| signal recognition particle protein Srp54 [Methanobacterium
formicicum DSM 3637]
Length = 443
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 211/334 (63%), Gaps = 3/334 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ TIIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLGNLGKNLTNTMKKLAGMTIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G + + + ++ EL +L K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEKPPKGVTAKEHVIKIVYEELVHLLGDKAAEVEIDK-KPYKILFVGLQGSGKTTTIGKM 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG+ PAL+C DT+R A++QL+Q + YG D + +A +G++ FKK
Sbjct: 120 AKYLQKKGFNPALICTDTWRPAAYEQLRQLTESLNLSLYGDPNNKDALDLARKGLKEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ DLIIVDT+GRHK+E L +EM Q+S PD V+ V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEQISAVVEPDEVMLVIDGTIGQQAKEQALAFSKTTK 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++++TK+DG AKGGGALSAVA +P+ FIGTGE +++ EVFD + F+SRLLGMGD
Sbjct: 238 IGSIVITKLDGSAKGGGALSAVAEIGAPIKFIGTGERIEDLEVFDPERFISRLLGMGDIR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
+++ E+ D E + + G FTL+ M+S
Sbjct: 298 SLIERAEEIAEEDVDAEAMDAMLSGKFTLKDMYS 331
>gi|73668456|ref|YP_304471.1| signal recognition particle protein Srp54 [Methanosarcina barkeri
str. Fusaro]
gi|121731303|sp|Q46E01.1|SRP54_METBF RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|72395618|gb|AAZ69891.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanosarcina barkeri str. Fusaro]
Length = 443
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 203/334 (60%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N R + + ++ EL +++ G + KP +IM VGLQGSGKTT+ K
Sbjct: 61 MKEAPPAGMNPREHVIRIVYQELMEIIGKG----AEIQLKPQIIMMVGLQGSGKTTSTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK K + FYG D V I G++
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLCEKLNVAFYGEENNPDAVEITRNGLKAL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH EA L EEM Q++ PD V+D+ IGQ A QA AF SV
Sbjct: 176 -EKYDVKIVDTAGRHALEADLIEEMEQINAVAKPDHKFMVLDAGIGQQASQQAHAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
M+K E + ++ ++ L +G FTL+ M+
Sbjct: 295 KSLMEKAEET--LSEEDVNVEALMQGRFTLKDMY 326
>gi|20093371|ref|NP_619446.1| signal recognition particle protein Srp54 [Methanosarcina
acetivorans C2A]
gi|23822174|sp|Q8THD0.1|SRP54_METAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|19918737|gb|AAM07926.1| signal recognition particle, 54 kDa protein [Methanosarcina
acetivorans C2A]
Length = 440
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 203/334 (60%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEEPPAGMNPREHVIRIVYQELMEIIGKG----AEIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK A K + FYG D V I G++
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKAL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH EA L EEM ++ PD V+D+ IGQ A QA AF SV
Sbjct: 176 -EKYDIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
M+K E + ++ ++ L +G FTL+ M+
Sbjct: 295 KSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMY 326
>gi|336476226|ref|YP_004615367.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanosalsum zhilinae DSM 4017]
gi|335929607|gb|AEH60148.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 439
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 212/334 (63%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ AI+++ ++ IDEK +N+ + +I RALLQ+DV K+V M +IK+
Sbjct: 1 MVMDKLGSSLQDAIKKLVSSGRIDEKTVNDVVKDIQRALLQSDVNVKMVMTMSKHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ G N R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPKGMNPREHVIRIVYQELTSII--GKGTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QKKG +PA++CADTFR GA+ QLK + + FYG D V I G++ F
Sbjct: 117 LARYFQKKGLRPAVICADTFRPGAYQQLKTLCERLNVAFYGEEGNEDAVGIVKRGLKEF- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ I+DT+GRH E L +EM + +PD + V+D++IGQ A +QA+AF +S+
Sbjct: 176 -EKYDIKIIDTAGRHALEKDLIKEMEDIHAICDPDYKLLVLDAAIGQQASEQARAFNESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ T S + FIGTGE ++ E F+ F+SRLLGMGD
Sbjct: 235 GISGVIITKLDGTAKGGGALSAVSETNSSIAFIGTGETPEDLEKFEPDRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
++K E + D+ ++ + +G FTL+ M+
Sbjct: 295 KTLLEKAEESLDKDELD--MEAMMKGRFTLKDMY 326
>gi|320100244|ref|YP_004175836.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfurococcus mucosus DSM 2162]
gi|319752596|gb|ADV64354.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfurococcus mucosus DSM 2162]
Length = 450
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 205/311 (65%), Gaps = 3/311 (0%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK ++E + E+ + L++ADV KL E+ + IK+ + G +++ ++ EL
Sbjct: 20 EKAVDEFIRELQKELVRADVNLKLAMELTSRIKERALKAEPPPGISRKEWFITVVYEELT 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G + LV ADTFR
Sbjct: 80 RLLGGERKPSVKPAK-KPWVIMLVGLQGSGKTTTTAKLAYFYKLEGLRVGLVAADTFRPA 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + +P YG SD V IAV+GVE F++ D+II+DT+GRH +E L E
Sbjct: 139 AYMQLKQLGEQVGVPVYGEPGNSDAVAIAVKGVEFFRERKMDVIIIDTAGRHHREEDLLE 198
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EM+++SE PD V+ V+D++IGQ AF+ A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 199 EMKKMSEHVKPDEVMLVIDAAIGQQAFNIARRFHEATPIGSIIVTKLDGTAKGGGALSAV 258
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
AAT + + FIGTGE +DE EVF+ FVSR+LG+GD ++K+ V +D E ++L
Sbjct: 259 AATGASIKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLIEKVRR-VQLDFTEEDARRL 317
Query: 324 SEGNFTLRIMF 334
EG +R+++
Sbjct: 318 IEGKVNMRLVY 328
>gi|304315442|ref|YP_003850589.1| signal recognition particle protein Srp54 [Methanothermobacter
marburgensis str. Marburg]
gi|302588901|gb|ADL59276.1| signal recognition particle protein Srp54 [Methanothermobacter
marburgensis str. Marburg]
Length = 442
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 213/333 (63%), Gaps = 5/333 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+S+ +++++ TI+DE+V+ E + +I RAL+Q+DV KLV + +I++
Sbjct: 1 MLGNLGRSLSKTMKKLAGMTIVDEEVVKEVIKDIQRALIQSDVNIKLVFNLSKSIEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCTK 120
++ G + I ++ E+ K+L G+ S K + KP I+F+GLQGSGKTTT K
Sbjct: 61 NEEPPKGITPKEHIISIVYEEMVKLL--GERSHELKIEEKPYRILFLGLQGSGKTTTIGK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KKG+ +VC DT+R AF+QLKQ I YG D + +A +G+E F+
Sbjct: 119 LARYLRKKGFTVGVVCTDTWRPAAFEQLKQYTEGQDISVYGDPENKDALDLAEKGLERFQ 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K+ D+II DT+GRHK+E L EM ++S P I V+D +IGQ A +QA AF+++
Sbjct: 179 KK--DVIIFDTAGRHKEEKDLLREMEELSAVIKPHEAILVIDGTIGQQAREQALAFREAT 236
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD + F+SRLLGMGD
Sbjct: 237 DIGSIIVTKLDGSAKGGGALSAVAEIGAPIRFIGTGERIDDLEVFDPERFISRLLGMGDL 296
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
++K+ EV + E L + G FTL+ M
Sbjct: 297 KSLLEKVEEVSDEELAEESLDAILSGKFTLKDM 329
>gi|378756834|gb|EHY66858.1| signal recognition particle 54 kDa subunit [Nematocida sp. 1 ERTm2]
Length = 477
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 211/330 (63%), Gaps = 2/330 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ LG IS A+Q + EK LN+ + +IT +LL ++V ++V ++ I +
Sbjct: 1 MLSDLGAGISNALQGFFGSKE-GEKELNDAIKKITTSLLGSNVNTRVVLNVRKRILERFK 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
D+ K + +Q+ +F ELC ++D GK F PKK + S ++FVGLQGSGKTTTC KY
Sbjct: 60 PQDIPTKSAKEKALQKIVFEELCAIMDSGKEPFKPKKKEVSTVLFVGLQGSGKTTTCCKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++G+K +VCADTFRAGA++Q+KQN I Y +P +A G + K
Sbjct: 120 AKYYKQRGFKVGIVCADTFRAGAYEQVKQNVQGMNIELYIPSDSVNPAHVARAGTDKLKV 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
C+L++VDTSGRH QE LF+EM ++ A +P IFV+D+SIGQ A A++F V
Sbjct: 180 SGCNLVLVDTSGRHTQEGELFDEMEEIVAAIDPTASIFVVDASIGQTAEIHARSFMSRVK 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G+VI+TK DG GGAL +VA TK+PV FIGTGE M+ E F+ K FV RL+G+GD S
Sbjct: 240 LGSVIITKTDGTKNIGGALCSVAETKTPVAFIGTGEGMNHIESFNPKGFVGRLMGLGDIS 299
Query: 302 GFMDKIHEV-VPMDQQPELLQKLSEGNFTL 330
F +KI + + ++Q EL+ K+ G F++
Sbjct: 300 SFAEKIEGLNISQEKQEELIGKIKAGEFSI 329
>gi|298675575|ref|YP_003727325.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanohalobium evestigatum Z-7303]
gi|298288563|gb|ADI74529.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanohalobium evestigatum Z-7303]
Length = 440
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 210/334 (62%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ N+ IDEK +N+ + +I RALLQADV +LV M IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVNSGRIDEKSVNDVVKDIQRALLQADVNVQLVMNMSKQIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ +G N R + + ++ EL ++ G T +P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPSGMNPREHVIRIVYQELINIIGEG----TEINLEPQTIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QKKG KPA++CADTFR GA+ QLK K IPFYG D + I G++
Sbjct: 117 LARYFQKKGLKPAVICADTFRPGAYHQLKSLCDKNSIPFYGEEGNEDSLGIVERGMDKLG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D++I+DT+GRH E L EEM Q++ PD + V+D++IGQ A +QA+AF +S+
Sbjct: 177 K--YDVLIIDTAGRHSLEQDLIEEMEQINSIAKPDKKLLVLDAAIGQQASEQARAFNESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGALSAV+ T S + FIG GE + E F+ F+SRLLGMGD
Sbjct: 235 GISGVVITKLDGTAKGGGALSAVSETNSSIAFIGVGETSGDLEKFEPDRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
++K E + ++ ++ + +G FTL+ M+
Sbjct: 295 RSLIEKAEESLSEEELD--VESMMQGRFTLKDMY 326
>gi|410670619|ref|YP_006922990.1| signal recognition particle protein Srp54 [Methanolobus
psychrophilus R15]
gi|409169747|gb|AFV23622.1| signal recognition particle protein Srp54 [Methanolobus
psychrophilus R15]
Length = 439
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 211/334 (63%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ + IDE+ + E + +I RALLQADV KLV EM +IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVKSGRIDERTVTEVVKDIQRALLQADVNVKLVMEMSKHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ +G + R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LHEEVPSGMSPREHVLRIVYQELINII--GKSTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG +PA++CADTFR GA+ QLK TK + FYG D V I G++ F
Sbjct: 117 LARYFQRKGLRPAVICADTFRPGAYQQLKTLCTKLDVAFYGEEGNPDAVGIVERGLKEFH 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+IIVDT+GRH E L +EM + PD + V+D +IGQ A +QA+ F +S+
Sbjct: 177 K--SDVIIVDTAGRHSLEKDLIKEMEDIHAMAQPDYKLLVLDGAIGQQASEQARTFNESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI++K+DG AKGGGALSAV+ T S + FIG GE ++ E F+ F+SRLLGMGD
Sbjct: 235 GISGVIISKLDGTAKGGGALSAVSETNSSIAFIGVGETPEDLEKFEPDRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
++K E + D++ + +Q + G FTL+ M+
Sbjct: 295 KSLIEKAEETLA-DEELD-VQSMMMGRFTLKDMY 326
>gi|330507723|ref|YP_004384151.1| signal sequence recognition 54 kDa protein [Methanosaeta concilii
GP6]
gi|328928531|gb|AEB68333.1| Signal sequence recognition 54 kDa protein [Methanosaeta concilii
GP6]
Length = 445
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 210/334 (62%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++A ID+ +++E + EI RALLQADV KLV ++ IK
Sbjct: 1 MVLDNLGGSLRNALKKIASANKIDKALVDEAVREIQRALLQADVNVKLVMQLSNTIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G N R + ++ EL ++ G+ + P K + IM VGLQGSGKTTT K
Sbjct: 61 LDEKPAPGMNPREHVINIVYQELINLV--GRGADIPLKKQN--IMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + A++CADTFRAGA+DQLK K I FYG +D +A G+E K
Sbjct: 117 LATFFQRKGLRTAVICADTFRAGAYDQLKALCEKQGIFFYGEKGNTDAPAVARNGLEATK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E L +EM+ + N D + VMD+++GQ A +QA+AF ++V
Sbjct: 177 K--YDIRIVDTAGRHALEGDLIQEMKDIHAVVNADQKLLVMDAALGQQASEQAKAFNEAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++ VI+TK+DG AKGGGALSAVA TK+ V FIG GE + E F+ F+SR+LGMGD
Sbjct: 235 NITGVIITKLDGTAKGGGALSAVAETKTSVAFIGVGETPADLERFEADRFISRMLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+++ EV +Q ++ L G FTL+ M+
Sbjct: 295 KTLIERAQEV--QTEQEVDVESLMRGKFTLKDMY 326
>gi|116753684|ref|YP_842802.1| signal recognition particle protein Srp54 [Methanosaeta thermophila
PT]
gi|121693787|sp|A0B638.1|SRP54_METTP RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|116665135|gb|ABK14162.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanosaeta
thermophila PT]
Length = 444
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 210/335 (62%), Gaps = 10/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++AT +D+ ++++ + +I RALLQADV KLV + I++
Sbjct: 1 MVLDNLGGSLRGALKKIASATRVDKALVDDAVRDIQRALLQADVNVKLVMSLSNRIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N R + ++ EL ++ G+ + P K IM VGLQGSGKTTT K
Sbjct: 61 LNEKPPAGMNPREHVINIVYQELINLI--GRGTDIPLK--KQTIMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q++G + A++CADTFRAGA+DQLK + I FYG + +A G+E K
Sbjct: 117 LATYFQRRGLRTAVICADTFRAGAYDQLKALCDRQGIFFYGEKGNENAPEVAKNGLEATK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E+ L +EM+ + N D + VMD++IGQ A +QA+AF ++V
Sbjct: 177 K--YDVRIVDTAGRHALESDLIQEMKDIHAVVNADHKLLVMDAAIGQQASEQARAFNEAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAVA TK+ V FIG GE + E F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVAETKTSVAFIGVGETASDLEKFEADRFISRLLGMGDI 294
Query: 301 SGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMF 334
G ++K EV + D + + K G FTL+ M+
Sbjct: 295 KGLIEKAQEVQIESDVDVDAMMK---GKFTLKDMY 326
>gi|288559422|ref|YP_003422908.1| signal recognition particle SRP54 protein [Methanobrevibacter
ruminantium M1]
gi|288542132|gb|ADC46016.1| signal recognition particle SRP54 protein [Methanobrevibacter
ruminantium M1]
Length = 444
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 212/334 (63%), Gaps = 3/334 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ ++ID+KV+ E + +I RAL+Q+DV +LV ++ I+K
Sbjct: 1 MLGSLGENLTNTMKKLAGMSVIDKKVIKEVVKDIQRALIQSDVNIQLVLKLSKTIEKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L + KP I+F+GLQGSGKTTT K
Sbjct: 61 EEEPPKGITPREHVITIIYEEMVNLLGSEAQELKITE-KPFKILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y Q+KG+ PA+VC DT+R A++QLKQ + +I YG D + +A +G++ FK
Sbjct: 120 CRYLQRKGFSPAVVCTDTWRPAAYEQLKQLTEEMQIQLYGDPDNKDALDLAEKGLKHFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +II DT+GRHK E L EEM ++ + NP + V+D++IGQ A +QA+AF Q+
Sbjct: 179 -NQKIIIFDTAGRHKNEEDLIEEMNKLDKIINPSESMLVIDATIGQQAGEQAKAFSQATD 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++I++K+DG AKGGGALSAVA T +P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 238 IGSIIISKLDGTAKGGGALSAVAETGAPIKFIGTGEGIDDFEAFDPERFISRLLGMGDIR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
++K EV+ D+ + + + G FTL M S
Sbjct: 298 SLIEKAEEVIDEDEATKTMNNMLSGKFTLVDMRS 331
>gi|148643420|ref|YP_001273933.1| signal recognition particle protein Srp54 [Methanobrevibacter
smithii ATCC 35061]
gi|222445662|ref|ZP_03608177.1| hypothetical protein METSMIALI_01303 [Methanobrevibacter smithii
DSM 2375]
gi|288869608|ref|ZP_05975207.2| signal recognition particle protein [Methanobrevibacter smithii DSM
2374]
gi|148552437|gb|ABQ87565.1| signal recognition particle GTPase SRP54 [Methanobrevibacter
smithii ATCC 35061]
gi|222435227|gb|EEE42392.1| Signal peptide binding domain protein [Methanobrevibacter smithii
DSM 2375]
gi|288860574|gb|EFC92872.1| signal recognition particle protein [Methanobrevibacter smithii DSM
2374]
Length = 447
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 205/329 (62%), Gaps = 3/329 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ ++++ ++ID+K + E + EI RAL+Q+DV LV ++ IKK
Sbjct: 3 MLGNLGENLTKTMKKLVGISVIDKKTIEEVVKEIQRALIQSDVNIALVLDLSKKIKKRAL 62
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L P KP I+F+GLQGSGKTTT K
Sbjct: 63 EEEPPKGITPREHVITIIYEEMVNLLGGEAPGLDIDV-KPYKILFLGLQGSGKTTTIGKL 121
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y QKKG+ PA+VC DT+R A++QL+Q + ++P YG D + +A +G++ FK
Sbjct: 122 CRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK- 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +II DT+GRHKQE L EM + + P I V+D +IGQ A +QA+AF Q+
Sbjct: 181 -NRKVIIFDTAGRHKQEEDLIAEMDTLDDIIQPTESILVIDGTIGQQAGEQAKAFSQATD 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG AKGGGA+SAVA T +P+ FIGTGE +D+FE+FD F+SRLLGMGD
Sbjct: 240 VGSIIITKLDGSAKGGGAMSAVAETGAPIKFIGTGERIDDFELFDPARFISRLLGMGDIQ 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K + + D + ++ + G FTL
Sbjct: 300 TLIEKAEDSIDEDMAEKTMKNMMSGKFTL 328
>gi|172048109|sp|A5UMY7.2|SRP54_METS3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
Length = 445
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 205/329 (62%), Gaps = 3/329 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ ++++ ++ID+K + E + EI RAL+Q+DV LV ++ IKK
Sbjct: 1 MLGNLGENLTKTMKKLVGISVIDKKTIEEVVKEIQRALIQSDVNIALVLDLSKKIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L P KP I+F+GLQGSGKTTT K
Sbjct: 61 EEEPPKGITPREHVITIIYEEMVNLLGGEAPGLDIDV-KPYKILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y QKKG+ PA+VC DT+R A++QL+Q + ++P YG D + +A +G++ FK
Sbjct: 120 CRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +II DT+GRHKQE L EM + + P I V+D +IGQ A +QA+AF Q+
Sbjct: 179 -NRKVIIFDTAGRHKQEEDLIAEMDTLDDIIQPTESILVIDGTIGQQAGEQAKAFSQATD 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+DG AKGGGA+SAVA T +P+ FIGTGE +D+FE+FD F+SRLLGMGD
Sbjct: 238 VGSIIITKLDGSAKGGGAMSAVAETGAPIKFIGTGERIDDFELFDPARFISRLLGMGDIQ 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K + + D + ++ + G FTL
Sbjct: 298 TLIEKAEDSIDEDMAEKTMKNMMSGKFTL 326
>gi|282165325|ref|YP_003357710.1| signal recognition 54 kDa protein [Methanocella paludicola SANAE]
gi|282157639|dbj|BAI62727.1| signal recognition 54 kDa protein [Methanocella paludicola SANAE]
Length = 442
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 210/335 (62%), Gaps = 8/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ AIQ+++NA ID++++++ + +I RAL+QADV KLV ++ IK+
Sbjct: 1 MVLDNLGSSLKSAIQKLANAGKIDKEIIDDVVKDIQRALIQADVNVKLVMKLSNRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + R + + ++ EL ++ GK TP +P IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPAGMDSREHVLRIVYTELVNII--GKA--TPIALEPQTIMMVGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + +KG KPA++CADT+R GA+DQL Q K + FYG D V I G++ +
Sbjct: 117 LARFFSRKGLKPAVICADTYRPGAYDQLSQLCEKLGVMFYGERDNKDAVAIVRNGLKETQ 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E L +EM+ + TN V+D++IGQ A +QA+AF +V
Sbjct: 177 K--YDVRIVDTAGRHALETELIKEMKDIWGLTNFTHRFLVLDAAIGQQASEQAKAFNDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGALSAV+ T + + FIG GE D+ E FD F+SRLLGMGD
Sbjct: 235 GITGVVITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPDDLERFDPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
++K +EV + Q+ ++K+ G FTL M+S
Sbjct: 295 KALVEKANEV--LSQKDVNVEKMMTGKFTLNDMYS 327
>gi|294495522|ref|YP_003542015.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanohalophilus mahii DSM 5219]
gi|292666521|gb|ADE36370.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanohalophilus mahii DSM 5219]
Length = 439
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 206/334 (61%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +L S+ A++++ A IDE+ +N+ + +I RALLQ+DV K+V ++ +IK+
Sbjct: 1 MVMDKLSNSLQDALKKLVGAGRIDERTVNDVVKDIQRALLQSDVNVKMVMQLSKSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D+ G N R + + ++ EL K++ G T KP IM +GLQGSGKTTT K
Sbjct: 61 LDEDVPQGMNPREHVIRIVYEELMKIVGEG----TDIPLKPQKIMMIGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG KPA+VCADTFR GA+ QLK + FYG D V I G+
Sbjct: 117 LARYFQRKGLKPAVVCADTFRPGAYQQLKTLCESLNVAFYGEEGNPDAVGIVERGLAEID 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ I+DT+GRH E+ L +EM ++ ++PD + V+D+ IGQ A +QA+AF SV
Sbjct: 177 K--YDVKIIDTAGRHSLESDLIDEMERIHAISSPDYKLLVLDAGIGQQASEQAKAFNDSV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+++K+DG AKGGGA+SAVAAT S + FIG GE + E F+ F+SRLLGMGD
Sbjct: 235 GISGVVISKLDGTAKGGGAMSAVAATDSSIAFIGVGETPQDLEKFEADRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
M+K E + D+ ++ + +G FTL+ M+
Sbjct: 295 RSLMEKAEESLSEDELD--VESMMKGKFTLKDMY 326
>gi|218884721|ref|YP_002429103.1| GTP-binding signal recognition particle SRP54, G- domain-containing
protein [Desulfurococcus kamchatkensis 1221n]
gi|218766337|gb|ACL11736.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Desulfurococcus kamchatkensis 1221n]
Length = 449
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 201/311 (64%), Gaps = 3/311 (0%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK + E + E+ + L++ADV KL E+ IK+ + G ++R ++ EL
Sbjct: 20 EKSVEEFIRELQKELVRADVNLKLAVEITNRIKERALKSEPPPGISRREWFITIVYEELT 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 80 RLLGGDKKPSIKPLK-KPWVIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + +P YG ++ V IAV+GV F + D+II+DT+GRH +E L +
Sbjct: 139 AYTQLKQLGEQIGVPVYGEPDNNNAVSIAVKGVSFFIERRTDIIIIDTAGRHHKEEDLLD 198
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EMR++SE PD VI V+D+SIGQ A + A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 199 EMRKISEQVKPDEVILVIDASIGQQAHNIAKKFHETTPIGSIIVTKLDGTAKGGGALSAV 258
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
AAT + V FIGTGE +DE EVF+ FVSR+LG+GD ++K+ + +D E ++L
Sbjct: 259 AATGAMVKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLVEKVRR-LQLDFTEEDAKRL 317
Query: 324 SEGNFTLRIMF 334
EG +R+++
Sbjct: 318 IEGKINMRLVY 328
>gi|45359114|ref|NP_988671.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis S2]
gi|74579561|sp|Q6LX03.1|SRP54_METMP RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|45047989|emb|CAF31107.1| signal recognition particle protein SRP54 [Methanococcus
maripaludis S2]
Length = 450
Score = 266 bits (681), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 221/337 (65%), Gaps = 7/337 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRHK+E L EM+++ + TNP+ +I V+D ++GQ A +QA+AFK+SV
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+GD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQ-PELLQKLSEGNFTLRIMFS 335
++K ++ MD+ E + + +G FTL +++
Sbjct: 299 LDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYA 333
>gi|347522718|ref|YP_004780288.1| GTP-binding signal recognition particle SRP54 G- domain containing
protein [Pyrolobus fumarii 1A]
gi|343459600|gb|AEM38036.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Pyrolobus fumarii 1A]
Length = 445
Score = 266 bits (681), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 214/338 (63%), Gaps = 12/338 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + E+ + E + ++ RALL ADV +LV ++ I++ + G
Sbjct: 6 AIRDAVRKFLRLSGPYERAVEEFIRDLQRALLSADVNVRLVFDLTRRIRERALKEKPPPG 65
Query: 69 HNKRRIIQQAIFNELCKML----DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
++R + ++ EL K+ +P KP +TP VIM VG+QGSGKTTT K A
Sbjct: 66 ASRRDWFLKIVYEELVKLFGGDREPEVKPPYTP-----YVIMLVGVQGSGKTTTAAKLAL 120
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
++++ G+K LV AD +R GA+DQL+Q A + + FYG D V IA GV+ K+
Sbjct: 121 FYKRMGYKVGLVAADVYRPGAYDQLRQLAERIGVMFYGEPGSRDAVGIATRGVKELKERG 180
Query: 184 CDLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+++IVDT+GRH E AL EEM+++SEA PD V+ V+D+++GQ +FD A+ F ++
Sbjct: 181 ANIVIVDTAGRHGYGSEVALLEEMKRMSEAIKPDEVMLVIDAAMGQKSFDLAKRFHEATP 240
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++IVTKMDG AKGGGALSAVAAT + + FIGTGE ++EFEVF+ + FVSRLLGMGD
Sbjct: 241 IGSIIVTKMDGTAKGGGALSAVAATGAIIKFIGTGEDVEEFEVFNPRRFVSRLLGMGDIE 300
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQ 339
G +++I + ++ + ++++ EG RI++ Q
Sbjct: 301 GILERIKRLEAAEEFEKTVEEMLEGKLNFRILYRQLRQ 338
>gi|340624864|ref|YP_004743317.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis X1]
gi|339905132|gb|AEK20574.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis X1]
Length = 450
Score = 266 bits (681), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 221/337 (65%), Gaps = 7/337 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D++I+DT+GRHK+E L EM+++ + TNP+ +I V+D ++GQ A +QA+AFK+SV
Sbjct: 181 K--VDVVIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+GD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQ-PELLQKLSEGNFTLRIMFS 335
++K ++ MD+ E + + +G FTL +++
Sbjct: 299 LDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYA 333
>gi|124028501|ref|YP_001013821.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
gi|171769654|sp|A2BNB5.1|SRP54_HYPBU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|123979195|gb|ABM81476.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
Length = 447
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 212/332 (63%), Gaps = 12/332 (3%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I RA+ ++ + E ++NE + ++ RAL+ ADV +LV + I++ + G
Sbjct: 7 IRRAVSKLLKRSGPYENIVNEFIRDLQRALISADVNVRLVFNLTKRIRERALKEQPPPGL 66
Query: 70 NKRRIIQQAIFNELCKML----DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
++R + + ++EL K+ +P KP +TP VIM VG+QGSGKTTT K A +
Sbjct: 67 SRREWLVKLTYDELVKLFGGEYEPEVKPPYTP-----YVIMMVGVQGSGKTTTVGKLAKF 121
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
++ G++ +V ADT+R GA++QLKQ A +A FYG DPV IA GVE K+
Sbjct: 122 YRGMGYRVGVVAADTYRPGAYEQLKQLADRAGAMFYGEPGSKDPVGIARRGVEELKQRGA 181
Query: 185 DLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSV 242
D++IVDT+GRH +E AL +EM++++EA PD V+ V+D+++GQ ++D A+ F ++ V
Sbjct: 182 DIVIVDTAGRHGYGEEEALLDEMKRIAEAIKPDEVVLVIDAAMGQKSYDLAKRFHEATPV 241
Query: 243 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSG 302
G++IVTKMDG AKGGGALSAVAAT + + FIGTGE +DE EVF K FV+RLLGMGD
Sbjct: 242 GSIIVTKMDGTAKGGGALSAVAATGARIKFIGTGEDIDEIEVFRPKRFVARLLGMGDLES 301
Query: 303 FMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
++KI + +++ + + ++ G T R ++
Sbjct: 302 LLEKIERLRGVEEFEKTVAEMMSGKITFRTIY 333
>gi|134045071|ref|YP_001096557.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C5]
gi|166222335|sp|A4FVX4.1|SRP54_METM5 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|132662696|gb|ABO34342.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanococcus maripaludis C5]
Length = 450
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 222/337 (65%), Gaps = 7/337 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+II+DT+GRHK+E +L EM+++ + TNP+ +I V+D ++GQ A +QA+AFK+SV
Sbjct: 181 K--VDVIIIDTAGRHKEEESLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESV 238
Query: 241 S-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
S +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+GD
Sbjct: 239 SEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGD 298
Query: 300 WSGFMDKIHEVVPMDQQ-PELLQKLSEGNFTLRIMFS 335
++K ++ MD+ E + + +G FTL +++
Sbjct: 299 LDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYA 333
>gi|119872111|ref|YP_930118.1| GTP-binding signal recognition particle [Pyrobaculum islandicum DSM
4184]
gi|158512993|sp|A1RS43.1|SRP54_PYRIL RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|119673519|gb|ABL87775.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
islandicum DSM 4184]
Length = 433
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 206/326 (63%), Gaps = 7/326 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG S+ ++++ + IDE L E EI RALL+ADV +V+ N K + +
Sbjct: 4 LGEVFSKLVEKIRGVSYIDEATLQELSREIQRALLKADVPLDMVKTFTENAVKRMREEKP 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
AG R + +++EL K+L +P+ F P K KP +++ +G++GSGKTTT K A Y
Sbjct: 64 PAGIPPREYVLYILYDELVKLLGGEQPAEFKPVK-KPYLVLLLGVEGSGKTTTAAKLARY 122
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
K+G++ LV DT R AFDQLKQ A K +PFYG D V IA GV+ FK N
Sbjct: 123 LVKRGYRVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDSKDAVEIARRGVQNFK--NM 180
Query: 185 DLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 244
D++I+DT+GRHK E AL +E++ + EA NPD VI V+D+++G+ A QA+AF + + + +
Sbjct: 181 DVVIIDTAGRHKNEEALLQEVKMIYEAVNPDEVILVIDATVGKLAAAQAEAFMKYLPIHS 240
Query: 245 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 304
VI+TKMD A+GGGAL+AV T + V FIG GE +DEF++F+ + FV+R+LGMGD +
Sbjct: 241 VIITKMDSTARGGGALAAVIKTGARVKFIGVGEDVDEFDLFNPRKFVARVLGMGDLDALV 300
Query: 305 DKIHEVVPMDQQPELLQKLSEGNFTL 330
+KI V ++ ++LQ++ G L
Sbjct: 301 EKIKAVF---EEEKVLQEIESGRLDL 323
>gi|390937784|ref|YP_006401522.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Desulfurococcus fermentans DSM 16532]
gi|390190891|gb|AFL65947.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Desulfurococcus fermentans DSM 16532]
Length = 451
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/311 (45%), Positives = 200/311 (64%), Gaps = 3/311 (0%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK + E + E+ + L++ADV KL E+ IK+ + G ++R ++ EL
Sbjct: 22 EKSVEEFIRELQKELVRADVNLKLAVEITNRIKERALKSEPPPGISRREWFITIVYEELT 81
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 82 RLLGGDKKPSIKPLK-KPWVIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 140
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + + YG +D V IAV+GV F + D+II+DT+GRH +E L +
Sbjct: 141 AYTQLKQLGEQIGVQVYGEPDNNDAVSIAVKGVSFFIERRTDIIIIDTAGRHHKEEDLLD 200
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EMR++SE PD VI V+D+SIGQ A + A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 201 EMRKISEQVKPDEVILVIDASIGQQAHNIAKKFHETTPIGSIIVTKLDGTAKGGGALSAV 260
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
AAT + V FIGTGE +DE EVF+ FVSR+LG+GD ++K+ + +D E ++L
Sbjct: 261 AATGAMVKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLVEKVRR-LQLDFTEEDAKRL 319
Query: 324 SEGNFTLRIMF 334
EG +R+++
Sbjct: 320 IEGKINMRLVY 330
>gi|183230399|ref|XP_001913435.1| signal recognition particle 54 kDa protein [Entamoeba histolytica
HM-1:IMSS]
gi|169802916|gb|EDS89786.1| signal recognition particle 54 kDa protein, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 259
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 170/224 (75%)
Query: 17 MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQ 76
M+++T++DE+V+N L EI +LL DV +R+M NIKK +N +D+ G +KR++I+
Sbjct: 1 MTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKINSEDIPDGIDKRKLIK 60
Query: 77 QAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVC 136
++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK A Y++ +G+KPA+V
Sbjct: 61 DSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITKLALYYKNRGYKPAVVG 120
Query: 137 ADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK 196
ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+KE D+I+VDTSGRHK
Sbjct: 121 ADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFRKEKNDIILVDTSGRHK 180
Query: 197 QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Q+ LF+EM+ V +A PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 QDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAV 224
>gi|386003024|ref|YP_005921323.1| Signal sequence recognition 54 kDa protein [Methanosaeta
harundinacea 6Ac]
gi|357211080|gb|AET65700.1| Signal sequence recognition 54 kDa protein [Methanosaeta
harundinacea 6Ac]
Length = 446
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/344 (42%), Positives = 210/344 (61%), Gaps = 11/344 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++A+ ID++V++E + EI RALLQADV KLV + I+
Sbjct: 1 MVLDSLGGSLRGALKKIASASRIDKQVVDEAVREIQRALLQADVNVKLVMNLSNRIRDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G N R + ++ EL ++ P K+ IM VGLQGSGKTTT K
Sbjct: 61 LSEKPAPGMNPREHVINIVYQELINLVGKSSPVTLEKQ----TIMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + A+VCADTFRAGAFDQLK K + FYG D +A G+E +
Sbjct: 117 LATFFQRKGLRSAVVCADTFRAGAFDQLKALCEKQGVFFYGEKGNPDAPAVARRGLEASR 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D++IVDT+GRH E L +EM + D + VMD+++GQ A +QA+AF ++V
Sbjct: 177 K--YDIVIVDTAGRHALEKDLIQEMMDIDAVVAADHKLLVMDAALGQQASEQAKAFNKAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGA+SAVA T S V FIG GE ++ E F+ F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGAMSAVAETNSSVAFIGVGETPNDLERFEADRFISRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQDSVLN 344
+++ E ++++ + ++ L G FTL+ M C Q +N
Sbjct: 295 KTLIERAQE-TKVEEEVD-VEALMRGKFTLKDM---CKQMEAIN 333
>gi|385806157|ref|YP_005842555.1| signal recognition 54 kDa protein [Fervidicoccus fontis Kam940]
gi|383796020|gb|AFH43103.1| signal recognition 54 kDa protein [Fervidicoccus fontis Kam940]
Length = 453
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 210/327 (64%), Gaps = 2/327 (0%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I AI++ ++T E+ + E + E+ R L+++DV K+V E + I+K + G
Sbjct: 8 IKEAIKKFLSSTSPYEQSVEEFIRELQRILIKSDVNVKVVFEFTSKIRKRALEEKPPQGV 67
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
++R + ++ EL +L + K KP VIM VG+QGSGKTTT K A+Y++ +G
Sbjct: 68 SRRDWFIKIVYEELISLLGGEEELNVLPKKKPYVIMLVGVQGSGKTTTAAKLAWYYKNRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
++ L+ ADTFRAGA++QLKQ A K + F+G +DP I+ +G+E + ++II+
Sbjct: 128 YRVGLIAADTFRAGAYEQLKQLAEKVGVEFWGDKGLNDPAEISRKGLEYHLSKKAEIIII 187
Query: 190 DTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 247
DT+GRH +E+ L +EM+ +++A PD VI V+D+SIGQ A+D A+ F ++ +G++I+
Sbjct: 188 DTAGRHGYGEESKLIDEMKAIADAVKPDEVILVLDASIGQKAYDLAKKFHEATPIGSIII 247
Query: 248 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 307
TK+DG AKGGGA+SA+AAT + V F+GTGE +DE E F K F SR+LGMGD ++++
Sbjct: 248 TKLDGTAKGGGAISAIAATGAKVKFVGTGEKVDEIEPFRPKNFASRILGMGDIEAILERV 307
Query: 308 HEVVPMDQQPELLQKLSEGNFTLRIMF 334
+ + ++ E+ L GN +++++
Sbjct: 308 YSTMSQNELEEMADSLMSGNLNMKLIY 334
>gi|296109473|ref|YP_003616422.1| GTP-binding signal recognition particle SRP54 G- domain protein
[methanocaldococcus infernus ME]
gi|295434287|gb|ADG13458.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus infernus ME]
Length = 448
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 222/330 (67%), Gaps = 5/330 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +L ++++AI ++ NA +D+K++ E + +I RAL+QADV KLV ++ I++
Sbjct: 1 MLEKLSENLNKAINKIKNAMFVDKKLIKEVVKDIQRALIQADVNVKLVLKITKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G +K+ I + ++ EL K+L + G+ +VIM VG+QGSGKTTT K
Sbjct: 61 EEEPPKGFSKKEHIIKIVYEELVKLLGEEAKPLKIEPGRRNVIMLVGIQGSGKTTTAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y +KKG++ L+ ADT+R A++QLKQ A K +P YG ++ P I EG+ FK
Sbjct: 121 AKYLKKKGYRVGLIAADTYRPAAYEQLKQLAEKIDVPIYGDLSKK-PEDIVKEGLNKFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV- 240
N D++I+DT+GRHK+E L EEM+++ E +NPD ++ V+D +IGQ A QA+AFK +V
Sbjct: 179 -NVDVVIIDTAGRHKEEKGLLEEMKRIKEISNPDEIMLVIDGTIGQQARVQAKAFKDAVG 237
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIGTGE +D+FE FD K F+SRLLG+GD
Sbjct: 238 EIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGTGEKIDDFEEFDPKKFISRLLGLGDL 297
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+ K E++ ++ E ++ + G FTL
Sbjct: 298 DTLLKKADEIID-EKAEESVEAIMRGKFTL 326
>gi|147919502|ref|YP_686758.1| signal recognition particle protein Srp54 [Methanocella arvoryzae
MRE50]
gi|121687852|sp|Q0W2G1.1|SRP54_UNCMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|110622154|emb|CAJ37432.1| signal recognition particle [Methanocella arvoryzae MRE50]
Length = 444
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 209/334 (62%), Gaps = 8/334 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+++++N+ ID++V++E + +I RA++QADV KLV ++ + IK
Sbjct: 1 MVLDNLGTSLKDALRKIANSGKIDKEVIDEVVKDIQRAMIQADVNVKLVMKLSSTIKNRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N + + + ++ EL ++ GK TP + IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPAGMNSKEHVLRIVYTELVNIV--GKA--TPVALQSQTIMMVGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KG KPA++CADT+R GA+DQLKQ K + FYG D V I G++
Sbjct: 117 IARYFARKGLKPAVICADTYRPGAYDQLKQLCDKLGVGFYGEAGNKDAVAIVRNGLKEMA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E L +EM+ + T D + V+D++IGQ A +QA+AF ++
Sbjct: 177 K--YDVKIVDTAGRHALETDLIQEMKDIYGLTKFDHKLLVLDAAIGQQASEQARAFNDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGALSAV+ T + + FIG GE D+ E FD F+SRLLGMGD
Sbjct: 235 GITGVVITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPDDMERFDPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+++ +EV+ D ++K+ +G FTL M+
Sbjct: 295 RALVERANEVLQKDDVN--VEKMMQGKFTLNDMY 326
>gi|229579027|ref|YP_002837425.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus islandicus Y.G.57.14]
gi|284997634|ref|YP_003419401.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Sulfolobus islandicus L.D.8.5]
gi|259511388|sp|C3NDW4.1|SRP54_SULIY RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|228009741|gb|ACP45503.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus islandicus Y.G.57.14]
gi|284445529|gb|ADB87031.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Sulfolobus islandicus L.D.8.5]
Length = 447
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 211/332 (63%), Gaps = 6/332 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ EA PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMFS 335
K+ + ++ + ++ + E G TLR +++
Sbjct: 303 KVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYA 334
>gi|227827525|ref|YP_002829305.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Sulfolobus islandicus M.14.25]
gi|229584728|ref|YP_002843230.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.27]
gi|238619682|ref|YP_002914508.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.4]
gi|385773194|ref|YP_005645760.1| GTP-binding signal recognition particle SRP54, G-domain [Sulfolobus
islandicus HVE10/4]
gi|385775828|ref|YP_005648396.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Sulfolobus islandicus REY15A]
gi|259511383|sp|C3N5B0.1|SRP54_SULIA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|259511384|sp|C4KGX6.1|SRP54_SULIK RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|259511386|sp|C3MYM8.1|SRP54_SULIM RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|227459321|gb|ACP38007.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Sulfolobus islandicus M.14.25]
gi|228019778|gb|ACP55185.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.27]
gi|238380752|gb|ACR41840.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.4]
gi|323474576|gb|ADX85182.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Sulfolobus islandicus REY15A]
gi|323477308|gb|ADX82546.1| GTP-binding signal recognition particle SRP54, G-domain [Sulfolobus
islandicus HVE10/4]
Length = 447
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 211/332 (63%), Gaps = 6/332 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFVKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTSGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ EA PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMFS 335
K+ + ++ + ++ + E G TLR +++
Sbjct: 303 KVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYA 334
>gi|229582222|ref|YP_002840621.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus Y.N.15.51]
gi|259511387|sp|C3NHT9.1|SRP54_SULIN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|228012938|gb|ACP48699.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus Y.N.15.51]
Length = 447
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 211/332 (63%), Gaps = 6/332 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTRSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ EA PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMFS 335
K+ + ++ + ++ + E G TLR +++
Sbjct: 303 KVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYA 334
>gi|383319835|ref|YP_005380676.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanocella
conradii HZ254]
gi|379321205|gb|AFD00158.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanocella
conradii HZ254]
Length = 442
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/335 (42%), Positives = 205/335 (61%), Gaps = 8/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+Q+++NA +D++V++E + +I RA++QADV KLV + I++
Sbjct: 1 MVLDSLGASLKSALQKLANAGKVDKEVIDEVVKDIQRAMIQADVNVKLVMRLSGRIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G + R + + ++ EL ++ GK TP +P IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPPGMDSREHVLRIVYAELVNII--GKA--TPVALEPQTIMMVGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KG KPA++CADT+R GA+DQL Q K + FYG D V I G+
Sbjct: 117 LARYFARKGLKPAVICADTYRPGAYDQLSQLCAKLGVTFYGERDNKDAVAIVRNGLRETA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ IVDT+GRH E L +EM+ ++ N V+D++IGQ A +QA+AF +V
Sbjct: 177 K--YDVRIVDTAGRHALETGLIKEMKDIAALANFTHRFLVLDAAIGQQASEQAKAFNDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG AKGGGALSAV+ T + + FIG GE + E FD F+SRLLGMGD
Sbjct: 235 GITGVIITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPEGLERFDPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
++K +EV + Q+ ++K+ G FTL M++
Sbjct: 295 KALVEKANEV--LSQKDVNVEKMMSGRFTLNDMYA 327
>gi|227830212|ref|YP_002831992.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus islandicus L.S.2.15]
gi|259511385|sp|C3MPN4.1|SRP54_SULIL RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|227456660|gb|ACP35347.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus islandicus L.S.2.15]
Length = 447
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 211/332 (63%), Gaps = 6/332 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P + P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTR-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ EA PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEALKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMFS 335
K+ + ++ + ++ + E G TLR +++
Sbjct: 303 KVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYA 334
>gi|84490317|ref|YP_448549.1| signal recognition particle protein Srp54 [Methanosphaera
stadtmanae DSM 3091]
gi|121731822|sp|Q2NE47.1|SRP54_METST RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|84373636|gb|ABC57906.1| signal recognition particle, 54 kDa protein [Methanosphaera
stadtmanae DSM 3091]
Length = 444
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 208/332 (62%), Gaps = 2/332 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+++ +++++ +IID+K L + +I RAL+Q+DV K+V + I+K
Sbjct: 1 MLEGLSESLTQTMKKLAGMSIIDKKTLKDVTKDIQRALIQSDVNVKVVFGLTKKIEKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++L G + + + + ++ EL ++ KP KP IM +GLQGSGKTTT K
Sbjct: 61 EEELPKGLSPKEHVMRIVYQELVNLIGE-KPEELKINRKPYKIMMLGLQGSGKTTTTAKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ +KKG A+VC DT+R A++QL+Q +P +G D + +A +G+E
Sbjct: 120 VKHLKKKGHTSAIVCTDTWRPAAYEQLRQLTEPLDVPVFGDPENKDAIDLAKKGLEKCGS 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+I+VDT+GRHK+E L +EM ++S+ PD VI V+D +IGQ A QA+ FK++
Sbjct: 180 K-YDVILVDTAGRHKEEKDLLDEMAELSQIVQPDEVILVIDGTIGQQARSQAETFKKTTD 238
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++IV+K+DG AKGGGALSAVA ++P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 239 IGSIIVSKLDGSAKGGGALSAVAEIRAPIKFIGTGERVDDFEAFDPERFISRLLGMGDLD 298
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
++K EV E++ + G FTL+ M
Sbjct: 299 TLIEKAAEVTSEKSDKEMIDSIISGKFTLKDM 330
>gi|16081627|ref|NP_393991.1| signal recognition particle protein Srp54 [Thermoplasma acidophilum
DSM 1728]
gi|12230635|sp|Q9HKT0.1|SRP54_THEAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|10639683|emb|CAC11655.1| probable signal recognition particle protein [Thermoplasma
acidophilum]
Length = 456
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 206/337 (61%), Gaps = 7/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL S+ I++++ ++ ID++ + E ++ R LL+ADV K V ++ +++
Sbjct: 1 MVLESFSASLRETIRKITGSSYIDKETVKEISKDLQRILLKADVNVKTVLQVTKEMERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + + + I+ EL K+L G+PS K KP IM VGL G+GKTTT K
Sbjct: 61 LEEKPPAGMAHQDYMVRIIYEELLKIL--GEPSNV--KLKPQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + KKG L+ AD R A+DQLKQ A++ FYG +E DPVR+ G+E K
Sbjct: 117 LARFFAKKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPVRLIKHGLEQLK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + I+DTSGR +A LF+E+R++ EA PD V+ ++D+++GQ A +A+AF ++
Sbjct: 177 --DVAVKIIDTSGRDSMDAELFDEIRRIKEAVAPDEVLMIIDATMGQQAGPEAKAFNDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +I+TKMDG AKGGGALSAVA P+ FIGTGEHMD+ EVFD K F+SRLLG+GD
Sbjct: 235 GVTGIIITKMDGTAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRLLGLGDL 294
Query: 301 SGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMFSL 336
+ + E + ++ E +KL G F L+ M+ +
Sbjct: 295 ESLFETVQEADITEEEAQESFEKLMTGKFNLKDMYDV 331
>gi|126460331|ref|YP_001056609.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
calidifontis JCM 11548]
gi|171855105|sp|A3MWX6.1|SRP54_PYRCJ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|126250052|gb|ABO09143.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
calidifontis JCM 11548]
Length = 431
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 204/327 (62%), Gaps = 7/327 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+L S+ I+++ IDE VL E EI R+LL+ADV +LV+ + K + +
Sbjct: 2 KLSEVFSKLIEKIRGVDYIDEAVLQELSREIQRSLLKADVPLELVKAFTDSAVKRIREEK 61
Query: 65 LAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
AG R + ++ EL K+L +P+ F P K KP V++ +G++GSGKTTT K A
Sbjct: 62 PPAGIPPREYLVYVLYEELVKLLGGEQPAEFKPTK-KPYVVLLLGVEGSGKTTTAAKLAK 120
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
Y K+G+K LV DT R AFDQLKQ A K +PFYG + V IAV GV+ FK N
Sbjct: 121 YLAKRGYKVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDGKNAVEIAVRGVQNFK--N 178
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVG 243
D++I+DT+GRH+ E L +E++ + +A PD V V+D+++G+ A QA+AF + + +
Sbjct: 179 MDVVIIDTAGRHRNEEELLKEVKAIYDAVKPDEVFLVIDATVGKLAAAQAEAFMKYLPIH 238
Query: 244 AVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF 303
+VI+TKMD A+GGGAL+AVA T + V FIG GE +DEFE+F+ + FV+R+LGMGD
Sbjct: 239 SVIITKMDSTARGGGALAAVAKTGARVKFIGVGEDVDEFELFNPRKFVARVLGMGDLDAL 298
Query: 304 MDKIHEVVPMDQQPELLQKLSEGNFTL 330
++KI V D+ +L++L G L
Sbjct: 299 VEKIKAVFEEDK---VLEELESGRLDL 322
>gi|2231060|emb|CAA73234.1| fifty-four homologue of SRP54 [Sulfolobus acidocaldarius]
Length = 446
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 200/315 (63%), Gaps = 6/315 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK +NE + E+ L++ADV +LV+++ IKK + + + KR +++EL
Sbjct: 21 EKAVNEFIKELQIILIKADVNVRLVKDLTDRIKKRITEEKPPSAIEKREWFISIVYDELS 80
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++ K P PKK P +IM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 81 RLFGGDKEPEVMPKK-LPYIIMLVGVQGSGKTTTSGKLALFYKKKGYKVGLVAADIYRPA 139
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAAL 201
A++QL Q + IP YG +P+ IA G+E F KE +++I+DT+GRH +EA+L
Sbjct: 140 AYEQLIQIGQQINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASL 199
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + + +PD VI V+D+SIGQ A+D A F Q+ +G++IV+KMDG AKGGGALS
Sbjct: 200 LEEMKSMYDKIHPDEVILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALS 259
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AV AT + + FIGTGE +DE EVF+ + FVSRLLG+GD ++KI V + + ++
Sbjct: 260 AVIATGAQIKFIGTGEKLDELEVFNPRRFVSRLLGLGDIESIIEKIKSVEDYENLEKRME 319
Query: 322 KLSEG--NFTLRIMF 334
+ G TLR ++
Sbjct: 320 DVISGKTKLTLRDIY 334
>gi|70607071|ref|YP_255941.1| signal recognition 54 kDa protein [Sulfolobus acidocaldarius DSM
639]
gi|449067310|ref|YP_007434392.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius N8]
gi|449069580|ref|YP_007436661.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius Ron12/I]
gi|73920792|sp|O07853.2|SRP54_SULAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|68567719|gb|AAY80648.1| signal recognition 54 kDa protein [Sulfolobus acidocaldarius DSM
639]
gi|449035818|gb|AGE71244.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius N8]
gi|449038088|gb|AGE73513.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius Ron12/I]
Length = 444
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 200/315 (63%), Gaps = 6/315 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK +NE + E+ L++ADV +LV+++ IKK + + + KR +++EL
Sbjct: 19 EKAVNEFIKELQIILIKADVNVRLVKDLTDRIKKRITEEKPPSAIEKREWFISIVYDELS 78
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++ K P PKK P +IM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 79 RLFGGDKEPEVMPKK-LPYIIMLVGVQGSGKTTTSGKLALFYKKKGYKVGLVAADIYRPA 137
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAAL 201
A++QL Q + IP YG +P+ IA G+E F KE +++I+DT+GRH +EA+L
Sbjct: 138 AYEQLIQIGQQINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASL 197
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + + +PD VI V+D+SIGQ A+D A F Q+ +G++IV+KMDG AKGGGALS
Sbjct: 198 LEEMKSMYDKIHPDEVILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALS 257
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AV AT + + FIGTGE +DE EVF+ + FVSRLLG+GD ++KI V + + ++
Sbjct: 258 AVIATGAQIKFIGTGEKLDELEVFNPRRFVSRLLGLGDIESIIEKIKSVEDYENLEKRME 317
Query: 322 KLSEG--NFTLRIMF 334
+ G TLR ++
Sbjct: 318 DVISGKTKLTLRDIY 332
>gi|332797104|ref|YP_004458604.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Acidianus hospitalis W1]
gi|332694839|gb|AEE94306.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Acidianus hospitalis W1]
Length = 449
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 200/316 (63%), Gaps = 6/316 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
+K + + + E+ ++L+ ADV KLV + IK+ + + +R + +++EL
Sbjct: 20 DKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNEKPPTYIERREWFIKIVYDELS 79
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
+ K P P K P VIM VG+QG+GKTTT K AY+++KKG+K LV AD +R
Sbjct: 80 NLFGGDKEPKVIPDK-IPYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYRPA 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A +QL+Q + +P YG E D V IA GVE F E ++IIVDT+GRH +EAAL
Sbjct: 139 ALEQLQQLGEQIGVPVYGEPGEKDAVGIAKRGVEKFLNEKMEIIIVDTAGRHGYGEEAAL 198
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + EA PD V V+D+SIGQ A+D A F Q+ +G +I+TKMDG AKGGGALS
Sbjct: 199 LEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALS 258
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AVAAT + + FIGTGE +DE EVF+ + FV+R+LGMGD ++KI EV D+ + ++
Sbjct: 259 AVAATGATIKFIGTGEKIDELEVFNPRRFVARILGMGDIETILEKIKEVENYDKMQKKME 318
Query: 322 KL--SEGNFTLRIMFS 335
++ +G TLR +++
Sbjct: 319 EVISGKGKLTLRDVYN 334
>gi|389860812|ref|YP_006363052.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermogladius cellulolyticus 1633]
gi|388525716|gb|AFK50914.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermogladius cellulolyticus 1633]
Length = 447
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 197/311 (63%), Gaps = 3/311 (0%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E +NE + E+ + L+++DV +LV ++ IK+ + G +R ++ +L
Sbjct: 20 ETSVNEFVKELQKELIRSDVNVRLVMDLTKKIKERAAEERPPPGLTRRDWFLSIVYEQLV 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
+ P +P P K KP V++ VGLQGSGKTTT K AY+++ +G+K LV ADTFR G
Sbjct: 80 NLFGGPERPQVKPPK-KPWVVLLVGLQGSGKTTTAGKLAYFYKLEGYKVGLVAADTFRPG 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A++QLK +P YG D V IAV+GVE F+++ D+II+DT+GRH +E L
Sbjct: 139 AYEQLKTLGEAVGVPVYGEPGSKDAVSIAVKGVEFFREKGFDVIIIDTAGRHHREEDLLA 198
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EM ++ PD V+ V+D+SIGQ AF+ A F VG++IVTK+DG AKGGGALSAV
Sbjct: 199 EMEDIAGRVRPDEVVLVLDASIGQQAFEVASKFHNKTPVGSIIVTKLDGTAKGGGALSAV 258
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
AAT + + F+GTGE +DE EVFD K FV+R++G+GD G ++++ + ++ + ++ +
Sbjct: 259 AATGARIKFVGTGEKIDELEVFDPKRFVARIMGLGDLEGLLERVKK-AKVELSEKDVEDI 317
Query: 324 SEGNFTLRIMF 334
EG +RI++
Sbjct: 318 LEGRVNMRIVY 328
>gi|18314019|ref|NP_560686.1| signal recognition particle protein [Pyrobaculum aerophilum str.
IM2]
gi|28380154|sp|Q8ZT95.1|SRP54_PYRAE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|18161596|gb|AAL64868.1| signal recognition particle (srp54 family), putative [Pyrobaculum
aerophilum str. IM2]
Length = 433
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/300 (44%), Positives = 189/300 (63%), Gaps = 4/300 (1%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
+ ++++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 10 KLLEKIRGVDYIDEATLQELSREIQRTLLKADVPLDLVKSFTENAVKRIKEEKPPAGIPP 69
Query: 72 RRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
R + ++ EL K+L +P+ F P K KP +++ +G++GSGKTTT K A Y K+G+
Sbjct: 70 REYLIYVLYEELVKLLGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTAAKLAKYLAKRGY 128
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K LV DT R AFDQL+Q A K +PFYG D V IA GV+ FK N D+IIVD
Sbjct: 129 KVGLVETDTIRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIAKRGVQNFK--NMDVIIVD 186
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
T+GRH+ E AL +E+R + +A +PD V+ V+D+++G+ A QA+AF + + + +VI+TKM
Sbjct: 187 TAGRHRNEEALLKEVRAIYDAVSPDEVVLVIDATVGKMAAAQAEAFMKYLPIHSVIITKM 246
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
D A+GGGAL+AVA T + V FIG GE +DEFE F + FV+R+LGMGD ++KI V
Sbjct: 247 DSTARGGGALAAVAKTGAKVKFIGVGEDVDEFEQFSPRKFVARVLGMGDLDTLLEKIKAV 306
>gi|374633768|ref|ZP_09706133.1| signal recognition particle GTPase [Metallosphaera yellowstonensis
MK1]
gi|373523556|gb|EHP68476.1| signal recognition particle GTPase [Metallosphaera yellowstonensis
MK1]
Length = 447
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/330 (41%), Positives = 205/330 (62%), Gaps = 6/330 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I A+++ T + ++E + ++ +AL+ +DVQ KLV + IK+ + +
Sbjct: 5 IRDAVRKFLGGTTSYDVAVDEFIKDLQKALISSDVQVKLVFSLTNKIKERLKKESPPTSL 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+R + +++EL + K P P P VIM VG+QG+GKTTT K AY+++K+
Sbjct: 65 ERREWFIKIVYDELSSLFGGDKEPEVNPG-SLPYVIMLVGVQGTGKTTTAGKLAYFYKKR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G+K ALV AD +R A +QL Q + +P YG E D V IA GVE E +LII
Sbjct: 124 GYKVALVGADVYRPAALEQLMQLGKQIGVPVYGEPGEKDAVGIAKRGVEKLLSEKYELII 183
Query: 189 VDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 246
VDT+GRH +EA L EEM+++ E+ P+ VI V+D+S+GQ A+D A+ F ++ VG++I
Sbjct: 184 VDTAGRHGYGEEAKLLEEMKEIYESVKPNEVILVIDASLGQKAYDLAKRFHEASKVGSII 243
Query: 247 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 306
+TKMDG AKGGGALSAV AT +P+ FIGTGE +DE EVF+ K FV+R+LGMGD ++K
Sbjct: 244 ITKMDGTAKGGGALSAVVATGAPIKFIGTGEKIDELEVFNPKRFVARVLGMGDVEAIIEK 303
Query: 307 IHEVVPMDQQPELLQKLSEG--NFTLRIMF 334
I V + + +Q+++ G TLR ++
Sbjct: 304 IKAVEDYEGIQKKMQEVTSGKSRLTLRDLY 333
>gi|288931995|ref|YP_003436055.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Ferroglobus placidus DSM 10642]
gi|288894243|gb|ADC65780.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Ferroglobus placidus DSM 10642]
Length = 431
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 207/327 (63%), Gaps = 10/327 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ +++++ ++ +D+K++ E + ++ RAL++ADV + V+E+ IKK +++ +G
Sbjct: 4 SLKDVVKKIARSSSVDKKLVEEIVRDVQRALIKADVNVRQVKEISDAIKKRALSEEVLSG 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ E+ + + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 64 LNPREHIIKIVYEEILRGVGEG-FDIPLKKSK---IMLVGLQGSGKTTTAAKIAKYFKDK 119
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K A++ DT R A++QLKQ A +A + F+G E D V+I EG+E K + D+I+
Sbjct: 120 GMKAAVIAGDTHRPAAYEQLKQLAEQAGLGFFGKKEEKDAVKIVKEGLEALK--DYDVIV 177
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH E L EEM++++E + PD V+D+SIGQ A QA+AF ++V + A+++T
Sbjct: 178 IDTAGRHALEEELIEEMKRIAEVSKPDYKFLVLDASIGQLASKQAEAFNEAVGIDAIVIT 237
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 238 KFDGTAKGGGALSAARLIGIPIAFIGTGEKIEDFEKFDPAGFVSRLLGMGDIKALLEKVE 297
Query: 309 EVVPMDQ-QPELLQKLSEGNFTLRIMF 334
+V ++ PE K G FTL+ ++
Sbjct: 298 RIVKEEELDPEAFLK---GKFTLKDVY 321
>gi|374326743|ref|YP_005084943.1| signal recognition particle [Pyrobaculum sp. 1860]
gi|356642012|gb|AET32691.1| signal recognition particle (srp54 family), putative [Pyrobaculum
sp. 1860]
Length = 433
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 190/301 (63%), Gaps = 4/301 (1%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ I+++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLIEKIRGVEYIDEATLQELSREIQRTLLKADVPLDLVKSFTENAVKRIKEEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + +++EL K+L + P F P K +P V++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYDELVKLLGGEQTPEFKPVK-RPYVVLLLGVEGSGKTTTAAKLAKYLAKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K LV DT R AFDQL+Q A + +PFYG E D V IA GV+ F+ N D++IV
Sbjct: 128 YKVGLVETDTIRPAAFDQLRQLAERIGVPFYGERDEKDAVEIAKRGVQNFR--NMDVVIV 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DT+GRH+ E AL +E++ + +A PD V+ V+D+++G+ A QA+AF + + + +VI+TK
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDAVGPDEVMLVIDATVGKLAAAQAEAFMKYLPIHSVIITK 245
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD A+GGGAL+AVA T + V FIG GE +DEFE F + FV+R+LGMGD ++KI
Sbjct: 246 MDSTARGGGALAAVAKTGARVKFIGVGEDVDEFEPFHPRKFVARVLGMGDLDALVEKIKA 305
Query: 310 V 310
V
Sbjct: 306 V 306
>gi|39654777|pdb|1QZW|A Chain A, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654779|pdb|1QZW|C Chain C, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654781|pdb|1QZW|E Chain E, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654783|pdb|1QZW|G Chain G, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654785|pdb|1QZX|A Chain A, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654786|pdb|1QZX|B Chain B, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
Length = 440
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 207/332 (62%), Gaps = 6/332 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 12 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 71
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 72 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 130
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 131 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 190
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ + PD VI V+D+SIGQ A+D A F Q+ +G+V
Sbjct: 191 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSV 250
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD ++
Sbjct: 251 IITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILE 310
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMFS 335
K+ + D+ + ++ + E G TLR +++
Sbjct: 311 KVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYA 342
>gi|292659708|pdb|3KL4|A Chain A, Recognition Of A Signal Peptide By The Signal Recognition
Particle
Length = 433
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 207/332 (62%), Gaps = 6/332 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 5 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 65 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 123
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 124 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 183
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ + PD VI V+D+SIGQ A+D A F Q+ +G+V
Sbjct: 184 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSV 243
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD ++
Sbjct: 244 IITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILE 303
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMFS 335
K+ + D+ + ++ + E G TLR +++
Sbjct: 304 KVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYA 335
>gi|15897850|ref|NP_342455.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus P2]
gi|21362961|sp|Q97ZE7.1|SRP54_SULSO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|13814155|gb|AAK41245.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus P2]
Length = 447
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 207/332 (62%), Gaps = 6/332 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ + PD VI V+D+SIGQ A+D A F Q+ +G+V
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSV 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMFS 335
K+ + D+ + ++ + E G TLR +++
Sbjct: 303 KVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYA 334
>gi|296241780|ref|YP_003649267.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosphaera aggregans DSM 11486]
gi|296094364|gb|ADG90315.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosphaera aggregans DSM 11486]
Length = 448
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/315 (40%), Positives = 199/315 (63%), Gaps = 11/315 (3%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E+ +NE + ++ + L+++DV L E+ IK+ + G +++ ++ EL
Sbjct: 22 EEAVNEFIKDLQKELVKSDVNLNLAFEITKKIKERALTQEPPVGVSRKEWFLSIVYEELV 81
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
K+L KPS P + KP +IM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 82 KLLGGDSKPSIKPAR-KPWIIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 140
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+DQL+Q + +P YG + D V IA GV+ F ++ +++I+DT+GRH +E L E
Sbjct: 141 AYDQLRQLGEQIGVPVYGDPSIEDAVEIASRGVKYFVEKGFEVVIIDTAGRHHKEEDLLE 200
Query: 204 EMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 263
EMR +S + PD +I V+D SIGQ A++ A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 201 EMRLISSSVKPDEIILVIDGSIGQQAYNIAKKFHETTPIGSIIVTKLDGTAKGGGALSAV 260
Query: 264 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK- 322
AAT +P+ F+G GE +++FEVF V R+LG GD G ++++ + Q EL +K
Sbjct: 261 AATGAPIKFVGLGEKVEDFEVFKPSKLVGRVLGYGDIEGLVERVKRI-----QLELTEKD 315
Query: 323 ---LSEGNFTLRIMF 334
+ EG +R+++
Sbjct: 316 VEDIMEGRLNMRLVY 330
>gi|15679321|ref|NP_276438.1| signal recognition particle protein Srp54 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3334341|sp|O27376.1|SRP54_METTH RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|2622427|gb|AAB85799.1| signal recognition particle protein SRP54 [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 442
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 207/332 (62%), Gaps = 3/332 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+S+ +++++ TI+DE+V+ E + +I RAL+Q+DV KLV + +I++
Sbjct: 1 MLGNLGRSLSKTMKKLAGMTIVDEEVVREVIKDIQRALIQSDVNIKLVFNLSKSIEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + I +++E+ K+L KP I+F+GLQGSGKTTT K
Sbjct: 61 NEEPPKGITPKEHIISIVYDEMVKLLGEKSHELVIDD-KPYRILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y +KKG+ +VC DT+R A +QLKQ + YG D + +A +G+ F+K
Sbjct: 120 ARYLRKKGFTVGVVCTDTWRPAALEQLKQYTEGQDVSIYGDPQNRDALDLAEKGLARFQK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+II DT+GRHK+E L EM ++S P I V+D +IGQ A +QA AF+++
Sbjct: 180 K--DVIIFDTAGRHKEEKDLLREMEELSAIVEPHEAILVIDGTIGQQAREQALAFRKATD 237
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD + F+SRLLGMGD
Sbjct: 238 IGSIIVTKLDGSAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFISRLLGMGDLR 297
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIM 333
++K+ EV + E L + G FTLR M
Sbjct: 298 SLLEKVEEVSEEEIAEESLDAILSGKFTLRDM 329
>gi|448417225|ref|ZP_21579243.1| signal recognition particle protein Srp54 [Halosarcina pallida JCM
14848]
gi|445678448|gb|ELZ30941.1| signal recognition particle protein Srp54 [Halosarcina pallida JCM
14848]
Length = 464
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 207/339 (61%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE ++E + EI R+LL ADV LV ++ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVDEIVREIQRSLLSADVDVSLVMDLSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LHEEPPGGTSARDHVLKIVYEELVDLI--GESTDIPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ KQ +A++ FYG E DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKQMCEEAEVEFYGDPDEEDPVKIAREGMEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E AL +E+ ++ NPD + V+D++IGQ A DQA+ F S+
Sbjct: 175 TEDADIHIVDTAGRHALEEALIDEIEEIERQVNPDRSMLVLDAAIGQGAKDQAREFDDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVNETDSSIGFLGTGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIM 333
+++ + Q+ PE + K G+FTL+ M
Sbjct: 295 KQLSERVERAMQETQEGEDDWDPEDIMK---GSFTLKDM 330
>gi|284175659|ref|ZP_06389628.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus 98/2]
gi|384434404|ref|YP_005643762.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus solfataricus 98/2]
gi|261602558|gb|ACX92161.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus solfataricus 98/2]
Length = 447
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 207/332 (62%), Gaps = 6/332 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +E L EEM+++ + PD VI V+D+SIGQ A+D A F Q+ +G++
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIGSI 242
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILE 302
Query: 306 KIHEVVPMDQQPELLQKLSE--GNFTLRIMFS 335
K+ + D+ + ++ + E G TLR +++
Sbjct: 303 KVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYA 334
>gi|60623872|ref|NP_377232.2| signal recognition particle protein [Sulfolobus tokodaii str. 7]
gi|28380160|sp|Q971S9.2|SRP54_SULTO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|342306424|dbj|BAK54513.1| signal recognition particle 54 kDa protein [Sulfolobus tokodaii
str. 7]
Length = 445
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 194/315 (61%), Gaps = 6/315 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
+K +N+ + E+ +L+++DV KLV + IK + + +R +++EL
Sbjct: 19 DKAVNDFIKELQISLIKSDVNVKLVSNLTQKIKDRLEKEKPPTAIERREWFISIVYDELS 78
Query: 85 KMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
K+ P PKK P VIM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 79 KLFGGDINPEVMPKK-IPYVIMLVGVQGSGKTTTAGKLALFYKKKGYKVGLVAADVYRPA 137
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A+DQL Q + +P YG +D V IA GVE F E D+IIVDT+GRH +E L
Sbjct: 138 AYDQLVQIGKQINVPVYGEPNNTDAVGIAKRGVEKFLSEKYDIIIVDTAGRHGYGEEVKL 197
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + PD VI V+D+SIGQ A+D A F Q+ +G++IVTKMDG AKGGGALS
Sbjct: 198 LEEMKNMYSEIKPDEVILVIDASIGQKAYDLASRFHQASPIGSIIVTKMDGTAKGGGALS 257
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 321
AVAAT + + FIGTGE +DE EVF+ + FVSR+LGMGD ++KI + +Q + ++
Sbjct: 258 AVAATGAAIKFIGTGEKLDELEVFNPRRFVSRILGMGDIESIIEKIKGMEEYEQIQKKME 317
Query: 322 KLSEG--NFTLRIMF 334
++ G TLR ++
Sbjct: 318 EVMSGKAKLTLRDIY 332
>gi|448622352|ref|ZP_21669046.1| signal recognition particle protein Srp54 [Haloferax denitrificans
ATCC 35960]
gi|445754434|gb|EMA05839.1| signal recognition particle protein Srp54 [Haloferax denitrificans
ATCC 35960]
Length = 464
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 203/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTNARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVQPDLNLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K GNFTL+ M
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDM 330
>gi|448607296|ref|ZP_21659441.1| signal recognition particle protein Srp54 [Haloferax sulfurifontis
ATCC BAA-897]
gi|445738308|gb|ELZ89833.1| signal recognition particle protein Srp54 [Haloferax sulfurifontis
ATCC BAA-897]
Length = 464
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 204/339 (60%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTNARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K GNFTL+ M
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDM 330
>gi|70943991|ref|XP_741976.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520694|emb|CAH80619.1| hypothetical protein PC000130.04.0 [Plasmodium chabaudi chabaudi]
Length = 201
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 156/201 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ V+ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTSALQKIQAAPVADDAVIEECLKEIVRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGGRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAAL 201
K+ DLIIVD+SGRHKQE L
Sbjct: 181 KDKYDLIIVDSSGRHKQENDL 201
>gi|193084148|gb|ACF09814.1| signal recognition particle subunit Ffh SRP54 [uncultured marine
group III euryarchaeote SAT1000-53-B3]
Length = 444
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 197/330 (59%), Gaps = 6/330 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ +++++ A+ I +++ E + +I RAL+Q+DV +L E+ I+
Sbjct: 1 MVLDALGDALRNTLRKIAGASHISPELIKELVKDIQRALIQSDVNVRLALELSKTIEYRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG R + + + EL K + S + K G P IM VGL G GKTTT K
Sbjct: 61 LEEKAPAGMTGREHVVRIVHQELVKAIGE---SRSLKLG-PQKIMLVGLYGQGKTTTTGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ +KKG L+ AD R AFDQL Q + ++P +GS D ++ EG+E FK
Sbjct: 117 LGKHFKKKGLNLGLIAADVHRPAAFDQLSQIGEQVQVPVFGSSDNKDAGKVVKEGLEEFK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++IVDT+GRH + L EM+ +S+ PD ++ VMD+++GQ A QAQAF +V
Sbjct: 177 E--LDVVIVDTAGRHALDEELISEMKSISKIVKPDEILLVMDATVGQQAGPQAQAFHDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V VI+TK+DG AKGGGALSAVA TK+P++F+GTGE +D E D F+SRLLGMGD
Sbjct: 235 GVSGVILTKLDGSAKGGGALSAVAVTKAPIVFVGTGESLDSLETLDPDRFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+++ EV+ + + +K+ G FTL
Sbjct: 295 QTLLERAEEVLDAESAEDTARKMLSGKFTL 324
>gi|399576173|ref|ZP_10769930.1| signal recognition particle subunit ffh/srp54 (srp54) [Halogranum
salarium B-1]
gi|399238884|gb|EJN59811.1| signal recognition particle subunit ffh/srp54 (srp54) [Halogranum
salarium B-1]
Length = 466
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 210/339 (61%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + ++ + E + EI R+LLQADV+ LV ++ +IKK
Sbjct: 1 MVLDDLGSSLRGSLNKLQGKSRLSKEDVEEIVKEIQRSLLQADVEVALVMDLSKSIKKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R I + ++ E+ +++ G + P + P IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHILKIVYEEMVELV--GDSTEIPLE--PQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG E DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDEEDPVKIAREGMEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ D+ IVDT+GRH E+ L +E+ ++ EA NP+L + V+D++IGQ A QAQ F S+
Sbjct: 175 TDDADVHIVDTAGRHALESDLIDEIEEIEEAVNPELNLLVLDAAIGQGAKKQAQEFDNSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETGSSISFLGTGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K G+FTL+ M
Sbjct: 295 KQLSERVERAMAETQAEDEDWNPEDIMK---GSFTLKDM 330
>gi|119719417|ref|YP_919912.1| GTP-binding signal recognition particle [Thermofilum pendens Hrk 5]
gi|119524537|gb|ABL77909.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermofilum
pendens Hrk 5]
Length = 431
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 203/328 (61%), Gaps = 2/328 (0%)
Query: 3 LAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+ L S+ + ++ ++ ++D + ++ + E+ RALL+ADV LV + IKK
Sbjct: 1 MESLKESLMGVVSRIRSSVLLDSREVDLVIRELQRALLKADVDVGLVLSVSERIKKRFFE 60
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
++ G +K+ ++ + ++ EL +L + P +MFVGL+GSGKTTT K A
Sbjct: 61 EEQPPGFSKKEVLVKILYEELVNLLGGEETPELKVSSTPFKVMFVGLEGSGKTTTVAKVA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
Y+++KG++ +V ADT+R GA++QL+ A K +PFYG E D V +A+ GV+ +
Sbjct: 121 NYYKRKGYRVGVVAADTYRPGAYEQLRSLAEKVGVPFYGDPQERDAVSLALRGVKVLSDK 180
Query: 183 NCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSV 242
+I++DT+GRHK E AL EE++ + PD V+ V+D++ G A QA+AF++++
Sbjct: 181 GIQMILIDTAGRHKDEEALMEEVKTLYREVKPDAVVLVVDATQGSAVARQARAFQEAMPF 240
Query: 243 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSG 302
G VIV KMDG AKGGGALSAVA++K+ VIFIGTGE +++ E F+ K FV+RLLGM D
Sbjct: 241 GYVIVAKMDGSAKGGGALSAVASSKARVIFIGTGEKIEDLEEFNPKKFVARLLGMPDLEA 300
Query: 303 FMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+ + E +++ E + ++ G TL
Sbjct: 301 LLQRFSEFARLEK--ERARAIASGKITL 326
>gi|325957954|ref|YP_004289420.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
gi|325329386|gb|ADZ08448.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
Length = 447
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 206/335 (61%), Gaps = 3/335 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
++L LG ++++ +++++ IIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 4 IMLGNLGKNLTKTMKKLAGMAIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRS 63
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ EL +L K +P I+F+GLQGSGKTT+ K
Sbjct: 64 LNEEPPKGVTPKEHVVRIVYEELVNLLGSSAQEVEIDK-RPYKILFMGLQGSGKTTSIGK 122
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y QKKG+ PA+V DT+R A++QL Q +P YG + D + +A G++ K
Sbjct: 123 LTKYLQKKGFNPAIVSTDTWRPAAYEQLLQLTEPMNVPVYGDHENKDALDLARTGLKAAK 182
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+IIVDT+GRHK+E+ L EM +S +PD VI V+D +IGQ A +QA AF +
Sbjct: 183 KN--DVIIVDTAGRHKEESDLLAEMESLSTIVDPDEVIMVIDGTIGQQAGEQALAFNNAT 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++I+TK+DG AKGGGALSAVA +P+ FIGTGE +++FE FD F+SRLLGMGD
Sbjct: 241 KIGSIIITKLDGSAKGGGALSAVAEIGAPIKFIGTGERVEDFEAFDPDRFISRLLGMGDI 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
+++ E+ + + + G FTL+ M+S
Sbjct: 301 RTLLERAEEIAEEEGDMGSVDAMLSGKFTLKDMYS 335
>gi|124486290|ref|YP_001030906.1| signal recognition particle protein Srp54 [Methanocorpusculum
labreanum Z]
gi|166222334|sp|A2STI3.1|SRP54_METLZ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|124363831|gb|ABN07639.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanocorpusculum labreanum Z]
Length = 446
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 202/335 (60%), Gaps = 10/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L L S+ A+++++ T+ID ++E + ++ RALL +DV KLV E+ IK
Sbjct: 1 MGLDTLSNSLKDAMKKLAGKTVIDRAAVDELVRDLQRALLSSDVNVKLVMELSKQIKARS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
+DL G N R + + ++ EL ++ GK + F+ K P I+ GLQGSGKTTT
Sbjct: 61 LDEDLPKGINAREHVLRIVYQELVNLV--GKEAEFSLK---PQKILMAGLQGSGKTTTTG 115
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K Y Q+KG K + AD FR GA+ QL+ K +P YG E D V+I +G+
Sbjct: 116 KLCRYFQRKGLKVGAIGADNFRPGAYAQLETLCKKINVPSYGDPKEKDAVKIVKDGLAAL 175
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + D+IIVDT+GRH E L +E+ QV+ NPD V+D+++GQAA DQA+ F ++
Sbjct: 176 K--DVDVIIVDTAGRHALEDDLIDEITQVNAYLNPDHRWLVIDAALGQAARDQAKRFHEA 233
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + VIVTKMDG AKGGGA+SAVA T+S ++FIG GE +D+ E FD F+SRLLGMGD
Sbjct: 234 IGIDGVIVTKMDGTAKGGGAMSAVAETQSGIVFIGNGETIDDLERFDPNGFISRLLGMGD 293
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
++K E M+ + + + G FTL M+
Sbjct: 294 LKALVEKAEE--SMNAEDVDVNAMLRGKFTLNDMY 326
>gi|126179907|ref|YP_001047872.1| signal recognition particle protein Srp54 [Methanoculleus
marisnigri JR1]
gi|125862701|gb|ABN57890.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoculleus marisnigri JR1]
Length = 443
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/334 (39%), Positives = 206/334 (61%), Gaps = 9/334 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ A+++++ T+ID + E + ++ RALL ADV KLV + IK+
Sbjct: 1 MLDNLGTSLKDAVKKLAGKTVIDRAAVEELVRDLQRALLSADVNVKLVMHLSQTIKQRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL +M+ PG+ + +P I+ GLQGSGKTTT K
Sbjct: 61 DEEPPKGMGVREHVLRIVYQELVRMMGSPGEVAL-----EPQTILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG + ++CADTFR GA+DQLK + +P +G E D ++I EG+ ++
Sbjct: 116 LARYFQRKGLRVGVICADTFRPGAYDQLKTLCDRISVPCFGDPKEPDALKIVREGLPKYR 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K ++II+DT GRH E L EE+ ++E ++ + V+D+++GQ A +QA+ F +++
Sbjct: 176 K-LYEVIIIDTQGRHALEENLIEEIVNINEISHAEHRWLVIDAALGQQASEQARRFHEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTKMDG AKGGGALSAVA T+S ++FIG+GE +D+ E FD F+SRLLGMGD
Sbjct: 235 GIDGVLVTKMDGTAKGGGALSAVAETQSGIVFIGSGETIDDLERFDPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+++ E V + + + +G FTLR M+
Sbjct: 295 KALVERAEEAVSGEDLD--VNAMLKGKFTLRDMY 326
>gi|284162145|ref|YP_003400768.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Archaeoglobus profundus DSM 5631]
gi|284012142|gb|ADB58095.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Archaeoglobus profundus DSM 5631]
Length = 435
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 202/327 (61%), Gaps = 10/327 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
++ A+++++ + +D+ ++ E + +I RAL++ADV + V+E+ IKK +++ G
Sbjct: 5 ALKEAVRKITRSATVDKALVEEIVKDIQRALIKADVNVRHVKEISDAIKKRALSEEVLEG 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ EL K + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 65 LNPREHIIKIVYEELLKGIGEG-LEIPLKKSK---IMLVGLQGSGKTTTTAKLAKYFKDK 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G + A+VCADT+R A+DQLKQ A I FYG D V+I ++ K + D+II
Sbjct: 121 GLRTAVVCADTWRPAAYDQLKQLAENYGIAFYGERESKDAVKIVENALKKLK--DYDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH E L +EM ++++ NPD + V+D++IGQ A QA+AF +++ + +I+T
Sbjct: 179 IDTAGRHALEKELIDEMIEIAKVANPDYKLLVLDAAIGQLASKQAKAFHEAIGIDGIIIT 238
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 239 KFDGTAKGGGALSAAREIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALIEKVE 298
Query: 309 EVVPMDQ-QPELLQKLSEGNFTLRIMF 334
V ++ PE K +G FTL+ ++
Sbjct: 299 RVAKQEELDPE---KFLKGTFTLKDIY 322
>gi|292654301|ref|YP_003534198.1| signal recognition particle protein [Haloferax volcanii DS2]
gi|433434645|ref|ZP_20408024.1| signal recognition particle protein Srp54 [Haloferax sp. BAB2207]
gi|448293845|ref|ZP_21483948.1| signal recognition particle protein Srp54 [Haloferax volcanii DS2]
gi|448573620|ref|ZP_21641103.1| signal recognition particle protein Srp54 [Haloferax lucentense DSM
14919]
gi|448597768|ref|ZP_21654693.1| signal recognition particle protein Srp54 [Haloferax alexandrinus
JCM 10717]
gi|28380161|sp|Q977V2.1|SRP54_HALVD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54; AltName: Full=Hv54h
gi|15277690|gb|AAK93963.1|AF395887_1 signal recognition particle 54 kDa subunit-like protein [Haloferax
volcanii]
gi|291371443|gb|ADE03670.1| signal recognition particle 54K protein [Haloferax volcanii DS2]
gi|432192665|gb|ELK49503.1| signal recognition particle protein Srp54 [Haloferax sp. BAB2207]
gi|445569766|gb|ELY24337.1| signal recognition particle protein Srp54 [Haloferax volcanii DS2]
gi|445718526|gb|ELZ70216.1| signal recognition particle protein Srp54 [Haloferax lucentense DSM
14919]
gi|445739229|gb|ELZ90738.1| signal recognition particle protein Srp54 [Haloferax alexandrinus
JCM 10717]
Length = 465
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 204/339 (60%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K GNFTL+ M
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDM 330
>gi|146304520|ref|YP_001191836.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera sedula DSM 5348]
gi|172046932|sp|A4YHL0.1|SRP54_METS5 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|145702770|gb|ABP95912.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera sedula DSM 5348]
Length = 446
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 202/333 (60%), Gaps = 12/333 (3%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I A+++ E + E + +I +AL+ +DVQ KLV + IK+ + + +
Sbjct: 5 IRDAVRKFLGGNTSYEVAVEEFIKDIQKALISSDVQVKLVFSLTNKIKERLKKETPPSNL 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+R + +++EL + K P PK P VIM VG+QG+GKTTT K AY+++K+
Sbjct: 65 ERREWFIKIVYDELSALFGGDKEPEVNPK-SIPWVIMLVGVQGTGKTTTAGKLAYFYKKR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G+K ALV AD +R A +QL+Q + +P YG D V IA GVE F E +L+I
Sbjct: 124 GYKVALVGADVYRPAALEQLQQIGKQINVPVYGEPGSQDAVGIAKRGVEKFLSERYELVI 183
Query: 189 VDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 246
VDT+GRH +E L EEM+ + E P+ VI V+D+S+GQ A+D A+ F ++ +VG++I
Sbjct: 184 VDTAGRHGYGEEVKLLEEMKDIYEKIKPNEVILVIDASLGQKAYDLAKRFHEASNVGSII 243
Query: 247 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 306
+TKMDG AKGGGALSAVAAT +P+ FIG GE +DE EVF+ + FV+R+LGMGD ++K
Sbjct: 244 ITKMDGTAKGGGALSAVAATGAPIKFIGVGEKIDELEVFNPRRFVARILGMGDLEAIIEK 303
Query: 307 IHEVVPMDQQPELLQKLSE-----GNFTLRIMF 334
+ M+ + +K+ E TLR M+
Sbjct: 304 MK---AMEDYEGIQKKMGEVMTGKSKLTLRDMY 333
>gi|448544114|ref|ZP_21625427.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-646]
gi|448551126|ref|ZP_21629268.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-645]
gi|448558381|ref|ZP_21633055.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-644]
gi|445705618|gb|ELZ57511.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-646]
gi|445710682|gb|ELZ62480.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-645]
gi|445713269|gb|ELZ65048.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-644]
Length = 465
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 204/339 (60%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K GNFTL+ M
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDM 330
>gi|193084084|gb|ACF09754.1| signal recognition particle subunit Ffh SRP54 [uncultured marine
group III euryarchaeote AD1000-40-D7]
Length = 444
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/334 (40%), Positives = 197/334 (58%), Gaps = 14/334 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ +++++ A+ I +++ E + +I RALLQ+DV +L E+ I+
Sbjct: 1 MVLDALGDALRNTLRKIAGASHISPELIKELVRDIQRALLQSDVNVRLALELSKTIENRA 60
Query: 61 NLDDLAAGHNKR----RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ AG R RI+ Q + N L + S + K G P IM VGL G GKTT
Sbjct: 61 LEEKAPAGMTGREHVVRIVHQELVNALGE-------SRSLKLG-PQKIMLVGLYGQGKTT 112
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
T K + +KKG L+ AD R AFDQL Q + ++P +GS D ++ EG+
Sbjct: 113 TTGKLGKHFKKKGLNLGLIAADVHRPAAFDQLSQIGEQIQVPVFGSSDNKDAAKVVKEGL 172
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAF 236
+ F + D++IVDT+GRH + L EM+ +S+ PD ++ VMD+++GQ A QAQAF
Sbjct: 173 KEFTE--LDVVIVDTAGRHALDEELISEMKSISKIVQPDEILLVMDATVGQQAGPQAQAF 230
Query: 237 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 296
+V V VI+TK+DG AKGGGALSAVA TK+P++F+GTGE +D E D F+SRLLG
Sbjct: 231 HDAVGVSGVILTKLDGSAKGGGALSAVAVTKAPIVFVGTGESLDSLETLDPDRFISRLLG 290
Query: 297 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
MGD +++ EV+ + + +K+ G FTL
Sbjct: 291 MGDLQTLLERAEEVLDAESAEDTARKMLSGKFTL 324
>gi|432328008|ref|YP_007246152.1| signal recognition particle GTPase [Aciduliprofundum sp. MAR08-339]
gi|432134717|gb|AGB03986.1| signal recognition particle GTPase [Aciduliprofundum sp. MAR08-339]
Length = 449
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 200/340 (58%), Gaps = 9/340 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ ++++S +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTLRKISKVGYVDESLIKEVVRDIQRALLKADVEVHLALKLSKNVERRAM 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP IM VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGREKEVAL----KPQKIMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG ALV D R A++QLKQ + +P +G E D RIA E + ++
Sbjct: 117 AKYFHKKGLSVALVACDVHRPAAYEQLKQIGEQINVPVFGIPGEKDARRIASEAMRKIRE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
I DTSGRH E L EE++ + E PD + VMD++IGQ A QA+AF +V
Sbjct: 177 AQVK--IFDTSGRHALEDDLIEEIKDLKEIIQPDEIFLVMDATIGQQAGKQAKAFHDAVG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+D+ E F+ F+SRLLGMGD
Sbjct: 235 ITGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLDDLEHFNPTRFISRLLGMGDLE 294
Query: 302 GFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMFSLCFQ 339
++ E + MD++ ++++K+ G F L+ M+ + Q
Sbjct: 295 TLLETAKE-LEMDEERAEKVMEKMMSGKFNLKDMYEIWEQ 333
>gi|12230633|sp|P70722.2|SRP54_ACIAM RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|4165432|emb|CAA69991.1| fifty-four homologue of SRP54 [Acidianus ambivalens]
Length = 451
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 210/337 (62%), Gaps = 6/337 (1%)
Query: 4 AQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLD 63
++L ++ A+++ + +K + + + E+ ++L+ ADV KLV + IK+ + +
Sbjct: 1 SKLLDNLRDAVRKFLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNE 60
Query: 64 DLAAGHNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
+R + +++EL + K P P K P VIM VG+QG+GKTTT K A
Sbjct: 61 KPPTYIERREWFIKIVYDELSNLFGGDKEPKVIPDK-IPYVIMLVGVQGTGKTTTAGKLA 119
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
Y+++KKG+K LV AD +R A +QL+Q + +P YG E D V IA GVE F E
Sbjct: 120 YFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDAVGIAKRGVEKFLSE 179
Query: 183 NCDLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++IIVDT+GRH +EAAL EEM+ + EA PD V V+D+SIGQ A+D A F Q+
Sbjct: 180 KMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQAS 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G +I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE EVF+ + FV+R+LGMGD
Sbjct: 240 KIGTIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARILGMGDI 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKL--SEGNFTLRIMFS 335
++KI EV D+ + ++++ +G TLR +++
Sbjct: 300 ETILEKIKEVENYDKMQKKMEEVISGKGKLTLRDVYN 336
>gi|448375496|ref|ZP_21558973.1| signal recognition particle protein Srp54 [Halovivax asiaticus JCM
14624]
gi|445658767|gb|ELZ11583.1| signal recognition particle protein Srp54 [Halovivax asiaticus JCM
14624]
Length = 465
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E + + EI R+LL ADV LV E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEADVESVVTEIQRSLLSADVDVSLVMELSENIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEDQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG KPA++ DTFR GAFDQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSTKGLKPAVIQTDTFRPGAFDQAKQMTERAEVEFYGDPDSEDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
N D+ IVDT+GRH E L +E+ ++ +PD+ + V+D++IGQ A DQA+ F S+
Sbjct: 175 TANADVHIVDTAGRHALEDDLIDEIEEIERVVDPDISLLVLDAAIGQGAKDQAREFHDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ + F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVDDIERFEPEGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIM 333
+ +++ + D PE ++ +GNFTL M
Sbjct: 295 AQLAERVERAMDQTDIEEDDWDPE---EMLQGNFTLNDM 330
>gi|448330573|ref|ZP_21519853.1| signal recognition particle protein Srp54 [Natrinema versiforme JCM
10478]
gi|445611451|gb|ELY65203.1| signal recognition particle protein Srp54 [Natrinema versiforme JCM
10478]
Length = 464
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 203/336 (60%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG DPV IA EG+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVDFYGDPDSEDPVEIAREGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ + +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIAEIEEIEDVVDPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ E M+++ + + +G FTL M
Sbjct: 295 SQLAERVERAMEQTDMEEEDWDPEDMLQGQFTLNDM 330
>gi|48477967|ref|YP_023673.1| signal recognition particle protein Srp54 [Picrophilus torridus DSM
9790]
gi|48430615|gb|AAT43480.1| signal recognition particle protein Srp54 [Picrophilus torridus DSM
9790]
Length = 456
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 203/337 (60%), Gaps = 7/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ +++S ++ ID++ + E +I RALL+ADV KLV + +++
Sbjct: 1 MVLENLSSSLKDVFKKISGSSYIDKETIKEVSKDIQRALLKADVNVKLVISLTNRLQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG +++ I + I+ EL +L G+ S + KP IM VGL G+GKTTT K
Sbjct: 61 ATEKPPAGMSEQDFILKIIYEELLSIL--GEESRI--ELKPQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + KKG L+ AD R GA++QL+Q + + FYG E DPV+I G++
Sbjct: 117 LARFFIKKGLSVGLIAADVHRPGAYEQLEQISKQVNSLFYGEKNEKDPVKIIKNGLDRLG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + I+DTSGR + L +E++++ PD V++V+D+++GQ QA+ +V
Sbjct: 177 --DAKVKIIDTSGRDSLDDELIDEIKRIKNEIKPDEVLYVVDATLGQQVGPQAKVLNDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
S+ VI+TKMDG KGGGALSAVA KSPV FIGTGEHM++FEVF+ + F+SRLLGMGD
Sbjct: 235 SISGVIITKMDGTGKGGGALSAVAEIKSPVYFIGTGEHMEDFEVFNPRKFLSRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPE-LLQKLSEGNFTLRIMFSL 336
M+ + E +++ E L KL G F L+ M+ +
Sbjct: 295 DALMEAVKETNITEEEAEKSLDKLMSGKFNLKDMYDV 331
>gi|448589278|ref|ZP_21649437.1| signal recognition particle protein Srp54 [Haloferax elongans ATCC
BAA-1513]
gi|445735706|gb|ELZ87254.1| signal recognition particle protein Srp54 [Haloferax elongans ATCC
BAA-1513]
Length = 461
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 203/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + IDE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRIDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVSLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K G+FTL+ M
Sbjct: 295 KQLSERVERAMAETTAEDEDWDPEEMMK---GSFTLKDM 330
>gi|355571041|ref|ZP_09042311.1| Signal recognition 54 kDa protein [Methanolinea tarda NOBI-1]
gi|354826323|gb|EHF10539.1| Signal recognition 54 kDa protein [Methanolinea tarda NOBI-1]
Length = 440
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 206/334 (61%), Gaps = 8/334 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG S+ A+++++ T++D + E + ++ RAL+QADV +LV ++ IKK
Sbjct: 1 MLDRLGTSLKDAVKKLAGKTVVDRAAVEELVRDLQRALIQADVNVRLVMQLSEAIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G R + + ++ EL +++ S K +P VI+ GLQGSGKTTT K
Sbjct: 61 EEQPPKGMTVREHVLRIVYQELVRLVG----SAGEVKLEPQVILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + A++CADTFR GAFDQL ++ +P +G+ E D ++I EG+++
Sbjct: 117 ARYFQRKGLRVAVICADTFRPGAFDQLNTLCSRIHVPCFGNPGEKDALKIVREGLKSL-- 174
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ ++II+DT GRH E+ L E+ + + V+D+++GQ A +QA+ F +++S
Sbjct: 175 SSAEVIIIDTQGRHALESDLIREIIDIQAIASAQHRWLVIDAALGQQAAEQARKFHEAIS 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGALSAVA T+S ++FIG+GE +D+ E FD F+SRLLGMGD
Sbjct: 235 IDGVIITKMDGTAKGGGALSAVAETRSGIVFIGSGETIDDLERFDPDGFISRLLGMGDLK 294
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
++K E + + + + G F+LR M++
Sbjct: 295 ALVEKAEETLAAAEVD--VNAMLRGKFSLRDMYN 326
>gi|327401116|ref|YP_004341955.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
gi|327316624|gb|AEA47240.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
Length = 436
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 200/327 (61%), Gaps = 10/327 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ +++++ +T +D+ ++ E + +I RALL+ADV + V+E+ IKK +D+
Sbjct: 5 SLKDIVKKIARSTTVDKALVEEVVRDIQRALLKADVNVRQVKEISDAIKKRALSEDVLPT 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ EL + + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 65 FNVREHIIRIVYEELMRGIGEG-LEIPLKKAK---IMLVGLQGSGKTTTAAKLAKYFKDK 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K ++ ADT+R A++QLKQ A I FYG D V IA G++ K + D+II
Sbjct: 121 GMKTGVIAADTWRPAAYEQLKQLAESYGIGFYGEKENKDAVEIARNGLKALK--DYDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH E L +EM ++++AT PD + V+D++IGQ A QA+AF ++ + +I+T
Sbjct: 179 IDTAGRHALEEELIDEMIEIAKATQPDYKLLVLDAAIGQLASRQAKAFHDAIGINGIIIT 238
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 239 KFDGTAKGGGALSAAREIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALLEKVE 298
Query: 309 EVVPMDQ-QPELLQKLSEGNFTLRIMF 334
VV ++ PE K G FTL+ ++
Sbjct: 299 RVVSEEELDPEAFLK---GTFTLKDVY 322
>gi|11498230|ref|NP_069456.1| signal recognition particle protein Srp54 [Archaeoglobus fulgidus
DSM 4304]
gi|3334342|sp|O29633.1|SRP54_ARCFU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|2650007|gb|AAB90619.1| signal recognition particle, subunit SRP54 (srp54) [Archaeoglobus
fulgidus DSM 4304]
Length = 433
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 199/327 (60%), Gaps = 10/327 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ ++++ ++ ID+K + E + EI RAL++ADV + V+E+ IKK +D+
Sbjct: 5 SLKEVARKIAGSSSIDKKFVEEMVKEIQRALIKADVNVRQVKEISDAIKKRALSEDVLPA 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N + I + ++ EL + + G KK K IM VGLQGSGKTTT K A Y + +
Sbjct: 65 LNAKEQILKIVYEELLRGVGEG-LEIPLKKAK---IMLVGLQGSGKTTTTAKMAKYFKDR 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K A+V ADT+R A++QL+Q A + I FYG E D V+I +E K + D+II
Sbjct: 121 GMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEKDAVKIVKNALEKLK--DHDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
+DT+GRH E L +EM +++E PD + V+D++IGQ A QAQAF +++ + +I+T
Sbjct: 179 IDTAGRHALEDELIDEMIKIAEVARPDYKLLVLDAAIGQLASKQAQAFHEAIGINGIIIT 238
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD M+KI
Sbjct: 239 KFDGTAKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALMEKIE 298
Query: 309 EVVPMDQ-QPELLQKLSEGNFTLRIMF 334
+ ++ PE K G FTL+ ++
Sbjct: 299 RIASEEELDPEAFLK---GTFTLKDIY 322
>gi|433637372|ref|YP_007283132.1| signal recognition particle GTPase [Halovivax ruber XH-70]
gi|433289176|gb|AGB14999.1| signal recognition particle GTPase [Halovivax ruber XH-70]
Length = 465
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E + + EI R+LL ADV LV E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEADVESVVTEIQRSLLSADVDVSLVMELSENIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEDQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG KPA++ DTFR GA+DQ +Q +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSTKGLKPAVIQTDTFRPGAYDQAEQMTERAEVDFYGDPDAEDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
N D+ IVDT+GRH EA L +E+ ++ +PD + V+D++IGQ A DQA+ F S+
Sbjct: 175 TANADVHIVDTAGRHALEADLIDEIEEIERVVDPDTSLLVLDAAIGQGAKDQAREFHDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ + F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVDDIERFEPEGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIM 333
+ +++ + D PE ++ +GNFTL M
Sbjct: 295 AQLAERVERAMDQTDIEEDDWDPE---EMLQGNFTLNDM 330
>gi|313124886|ref|YP_004035150.1| signal recognition particle subunit ffh/srp54 (srp54)
[Halogeometricum borinquense DSM 11551]
gi|448287294|ref|ZP_21478507.1| signal recognition particle protein Srp54 [Halogeometricum
borinquense DSM 11551]
gi|312291251|gb|ADQ65711.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halogeometricum borinquense DSM 11551]
gi|445572502|gb|ELY27040.1| signal recognition particle protein Srp54 [Halogeometricum
borinquense DSM 11551]
Length = 464
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 203/336 (60%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ ++IK+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVREIQRSLLSADVDVNLVMDLSSSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTSARDHVLKIVYEELVGLI--GESTDIPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG + A++ DTFR GA+DQ KQ +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRAAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDEEDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E AL +E+ + A NPD + V+D++IGQ A DQA+ F S+
Sbjct: 175 TEDADIHIVDTAGRHALEDALIDEIEDIDSAVNPDRSLLVLDAAIGQGAKDQARQFDDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALTAVNETDSSIGFLGTGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + +G+FTL+ M
Sbjct: 295 KQLSERVERAMAETQEEEDDWDPEDIMKGSFTLKDM 330
>gi|448560514|ref|ZP_21633962.1| signal recognition particle protein Srp54 [Haloferax prahovense DSM
18310]
gi|448582785|ref|ZP_21646289.1| signal recognition particle protein Srp54 [Haloferax gibbonsii ATCC
33959]
gi|445722164|gb|ELZ73827.1| signal recognition particle protein Srp54 [Haloferax prahovense DSM
18310]
gi|445732433|gb|ELZ84016.1| signal recognition particle protein Srp54 [Haloferax gibbonsii ATCC
33959]
Length = 463
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 203/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K GNFTL+ M
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDM 330
>gi|145591970|ref|YP_001153972.1| GTP-binding signal recognition particle [Pyrobaculum arsenaticum
DSM 13514]
gi|158514165|sp|A4WLQ3.1|SRP54_PYRAR RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|145283738|gb|ABP51320.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
arsenaticum DSM 13514]
Length = 433
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 186/301 (61%), Gaps = 4/301 (1%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ ++++ + IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLVEKIRDVEYIDEATLQEIAREIQRTLLKADVPLDLVKTFTDNAVKRIREEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + ++ EL K++ +P+ F P K KP +++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYEELVKLMGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTSAKLARYLMKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K +V DT R AFDQL+Q A K PFYG D V IA GV K D++I+
Sbjct: 128 YKVGMVETDTIRPAAFDQLRQLAEKIGAPFYGERDGKDAVEIARRGVANLK--GVDVLII 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DT+GRH+ E AL +E++ + +A NPD V+ V+D+++G+ A QA+AF + + + VI+TK
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDAVNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIITK 245
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD A+GGGAL+AVA T + V FIG GE ++E E F+ + FV+RLLGMGD ++KI
Sbjct: 246 MDSTARGGGALAAVAKTGARVKFIGVGEDVEELEPFNPRKFVARLLGMGDLDALLEKIKA 305
Query: 310 V 310
V
Sbjct: 306 V 306
>gi|448578870|ref|ZP_21644246.1| signal recognition particle protein Srp54 [Haloferax larsenii JCM
13917]
gi|445725453|gb|ELZ77077.1| signal recognition particle protein Srp54 [Haloferax larsenii JCM
13917]
Length = 461
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 203/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + IDE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRIDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVSLI--GESTDIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K G+FTL+ M
Sbjct: 295 KQLSERVERAMAETTAEDEDWDPEEMMK---GSFTLKDM 330
>gi|379003325|ref|YP_005258997.1| Signal recognition particle GTPase [Pyrobaculum oguniense TE7]
gi|375158778|gb|AFA38390.1| Signal recognition particle GTPase [Pyrobaculum oguniense TE7]
Length = 433
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 184/301 (61%), Gaps = 4/301 (1%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ + ++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLVDKIRGVEYIDEATLQEIAREIQRTLLKADVPLDLVKTFTDNAVKRIREEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + ++ EL K++ +P+ F P K KP +++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYEELVKLMGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTSAKLARYLMKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K +V DT R AFDQLKQ A K PFYG D V IA GV K D++I+
Sbjct: 128 YKVGMVETDTIRPAAFDQLKQLAEKIGAPFYGERDGKDAVEIARRGVTNLK--GVDVLII 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DT+GRH+ E AL +E++ + +A NPD V+ V+D+++G+ A QA+AF + + + VI+TK
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDAVNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIITK 245
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD A+GGGAL+AVA T + V FIG GE ++E E F+ + FV+RLLGMGD ++KI
Sbjct: 246 MDSTARGGGALAAVAKTGARVKFIGVGEDVEELEPFNPRKFVARLLGMGDLDALLEKIKA 305
Query: 310 V 310
V
Sbjct: 306 V 306
>gi|126465672|ref|YP_001040781.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylothermus marinus F1]
gi|171769996|sp|A3DML3.1|SRP54_STAMF RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|126014495|gb|ABN69873.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylothermus marinus F1]
Length = 441
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 202/335 (60%), Gaps = 5/335 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL + ++SR + + E+ + E + ++ + L++ADV KLV E+ I++
Sbjct: 1 MVLDGVRKALSRFLSGKGDY----ERAVKEFIRDLQKELIKADVNVKLVLELTKKIRERA 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G +R ++ EL K K K KP V++ VGLQGSGKTTT K
Sbjct: 57 LKEEPPPGITRREWFVNIVYEELSKFFGGDKKPDIKPKKKPWVMLLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY++ +G++ LV ADT+R A+DQLKQ + +P YG D V IA GVE F
Sbjct: 117 LAYYYKLEGYRVGLVAADTYRPAAYDQLKQLGEQIGVPVYGEPDNKDAVEIARRGVEYFV 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D++IVDT+GRH +E L EMR+++E PD V+ V+D++IGQ A D A+ F ++
Sbjct: 177 SRGFDIVIVDTAGRHHREEDLLREMREIAENIKPDEVVLVIDAAIGQQAHDLAKKFHEAT 236
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA T + + FIGTGE +DE EVF FV+R+LG+GD
Sbjct: 237 PIGSIIVTKLDGTAKGGGALSAVAVTGATIKFIGTGEKIDELEVFRPPRFVARILGIGDL 296
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
G ++K+ + + ++ + LS G +R+++
Sbjct: 297 EGLIEKVRRIKVEFTEKDVEEFLS-GRLNMRLVYK 330
>gi|448351062|ref|ZP_21539872.1| signal recognition particle protein Srp54 [Natrialba taiwanensis
DSM 12281]
gi|445635250|gb|ELY88421.1| signal recognition particle protein Srp54 [Natrialba taiwanensis
DSM 12281]
Length = 461
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
S+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 SIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E+ D PE + +G FTL M
Sbjct: 295 GQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDM 330
>gi|448712956|ref|ZP_21701886.1| signal recognition particle protein Srp54 [Halobiforma
nitratireducens JCM 10879]
gi|445789882|gb|EMA40556.1| signal recognition particle protein Srp54 [Halobiforma
nitratireducens JCM 10879]
Length = 463
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 203/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ ++E + EI R+L+ ADV LV+E+ +I++
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVDEIVKEIQRSLISADVDISLVQELSDSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA+V DTFR GA+DQ K+ A +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVVQTDTFRPGAYDQAKEMAERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ E+ D PE + +G FTL M
Sbjct: 295 SQLAERVERAMEQTEIEEEDWDPE---DMLQGQFTLNDM 330
>gi|448366728|ref|ZP_21554851.1| signal recognition particle protein Srp54 [Natrialba aegyptia DSM
13077]
gi|445654183|gb|ELZ07039.1| signal recognition particle protein Srp54 [Natrialba aegyptia DSM
13077]
Length = 461
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 203/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A++A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMASRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ +PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVDPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E+ D PE + +G FTL M
Sbjct: 295 GQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDM 330
>gi|432330521|ref|YP_007248664.1| signal recognition particle GTPase [Methanoregula formicicum SMSP]
gi|432137230|gb|AGB02157.1| signal recognition particle GTPase [Methanoregula formicicum SMSP]
Length = 442
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/334 (39%), Positives = 205/334 (61%), Gaps = 10/334 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ A+++++ T++D +++ + ++ RAL+ +DV KLV E+ I+
Sbjct: 1 MLDNLSSSLKDALKKLAGKTVVDRAAVDDLVKDLQRALISSDVNVKLVMELSKAIRTRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G N R + + ++ EL +++ + T K +P I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMNVREHVLRIVYQELVRLV----WASTEVKLEPQTILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG K ++CADTFR GAFDQ+ TK +P +G+ E D ++I EG+ K+
Sbjct: 117 ARYFQKKGMKVGVICADTFRPGAFDQISTLCTKINVPCFGNPQEKDALKITREGLAALKE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ +LIIVDT GRH EA L +E+ ++ T V+D+++GQ A +QA+ F +++
Sbjct: 177 Q--ELIIVDTQGRHALEAELIKEIIDLNVLTKATHRWLVIDAALGQQASEQAKRFHEAIG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGA+SAVA TKS + FIG+GE +++ E FD F+SRLLGMGD
Sbjct: 235 IDGVIITKMDGTAKGGGAMSAVAETKSGIAFIGSGETIEDLERFDPDGFISRLLGMGDLK 294
Query: 302 GFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMF 334
+++ +E + P D + K G FTLR M+
Sbjct: 295 ALVERANEAINPEDVDVNAMMK---GKFTLRDMY 325
>gi|429217180|ref|YP_007175170.1| signal recognition particle GTPase [Caldisphaera lagunensis DSM
15908]
gi|429133709|gb|AFZ70721.1| signal recognition particle GTPase [Caldisphaera lagunensis DSM
15908]
Length = 446
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 213/338 (63%), Gaps = 8/338 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L ++++ ++ +T D + E + ++ R L+++DV KLV+E+ NIKK
Sbjct: 1 MVLEGLRNAVTKFLK--GGSTYKDS--VEEFIKDLQRELIKSDVNIKLVKELSENIKKKA 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ +G +++ + +++EL + P PKK P +I+ VG+QGSGKTTT
Sbjct: 57 LEEEPPSGISRKEWFIKIVYDELSNLFGGDTTPDVEPKK-IPWIILLVGVQGSGKTTTAG 115
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A ++ KKG+K LV ADT+R GA++QLK + + FYG + I++ GVE F
Sbjct: 116 KLASFYVKKGYKVGLVAADTYRPGAYEQLKMLSNLSGAMFYGDQNNNKAEEISINGVEYF 175
Query: 180 KKENCDLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFK 237
K +N D+II+DT+GRH E +L +EMR +S PD VI V+DSSIGQ AFD A+ F
Sbjct: 176 KNKNADIIIIDTAGRHGYGNEKSLLDEMRNISNKVKPDEVILVLDSSIGQKAFDLAKQFH 235
Query: 238 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 297
++ +G++IVTK+DG AKGGG LSA+AAT + V FIGTGE +DE E+F+ FVSRLLG+
Sbjct: 236 ETTPIGSIIVTKLDGTAKGGGVLSAIAATGARVKFIGTGEKIDELELFNPSKFVSRLLGL 295
Query: 298 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
GD ++KI V +L + L++G T+R +++
Sbjct: 296 GDLDALLEKIKSVQDNINIEKLQEDLAKGKITMRTLYA 333
>gi|352681831|ref|YP_004892355.1| signal recognition particle subunit SRP54 [Thermoproteus tenax Kra
1]
gi|350274630|emb|CCC81275.1| signal recognition particle, subunit SRP54 [Thermoproteus tenax Kra
1]
Length = 439
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 198/323 (61%), Gaps = 11/323 (3%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ I ++ +DE+VL E E+ R+LL+ADV L++ + + + G
Sbjct: 9 SKLIDKIRGIDYLDEQVLTEITRELQRSLLKADVPLDLIKSFTDRAVQRMKEERPPPGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFT---PKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
+ + I++EL ++L G+ PK+ P VIM +G++GSGKTTT K A ++ K
Sbjct: 69 LKDYVIYIIYDELVRLLG-GEAEVNVGIPKR--PYVIMLLGVEGSGKTTTAAKIALFYLK 125
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G KP L+ DT R A+DQL+Q A K +PFYG D V IA G+ + K N DL+
Sbjct: 126 RGVKPGLIETDTIRPAAYDQLRQLAEKIGVPFYGEREGRDAVEIAKRGLASLK--NVDLV 183
Query: 188 IVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 247
IVDT+GRH+ E AL EE+R + EA PD V+ V+D+++G+ A QA+AF + V V +V +
Sbjct: 184 IVDTAGRHRNEQALLEEVRAIYEAVKPDEVMLVVDATVGRQAAAQAEAFMKYVPVHSVAI 243
Query: 248 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 307
TKMD A+GGGAL+AVA T + V FIG GE +DE E+F+ + FV+R+LGMGD ++++
Sbjct: 244 TKMDSTARGGGALAAVAKTGARVKFIGVGEGVDELELFNARKFVARVLGMGDLESLVERV 303
Query: 308 HEVVPMDQQPELLQKLSEGNFTL 330
V+ ++ ++L+ L G L
Sbjct: 304 KAVL---EEEKILEDLESGRMDL 323
>gi|448363999|ref|ZP_21552593.1| signal recognition particle protein Srp54 [Natrialba asiatica DSM
12278]
gi|445644887|gb|ELY97894.1| signal recognition particle protein Srp54 [Natrialba asiatica DSM
12278]
Length = 461
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A++A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMASRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E+ D PE + +G FTL M
Sbjct: 295 GQLAERVERAMDQTEIEEDDWDPE---DMLQGQFTLNDM 330
>gi|254169193|ref|ZP_04876028.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
gi|197621851|gb|EDY34431.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
Length = 348
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 201/339 (59%), Gaps = 7/339 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA + V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIARDAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ + I DTSGRH E L EE++ + E PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKEIIQPDEIFLVLDATIGQQAGKQAKAFHDAVG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 235 VTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDLE 294
Query: 302 GFMDKIHEVVPMDQQPE-LLQKLSEGNFTLRIMFSLCFQ 339
++ E+ + + E +++++ G F L+ M+ + Q
Sbjct: 295 TLLETAKELELKEVEAEKVMERMMSGKFNLKDMYEIWEQ 333
>gi|395646259|ref|ZP_10434119.1| Signal recognition 54 kDa protein [Methanofollis liminatans DSM
4140]
gi|395442999|gb|EJG07756.1| Signal recognition 54 kDa protein [Methanofollis liminatans DSM
4140]
Length = 438
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 202/334 (60%), Gaps = 10/334 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ A+++++ T++D + E + + RALLQADV KLV ++ +IK+
Sbjct: 1 MLDSLSSSLKDALKKIAGKTVVDRAAVEELVRSLQRALLQADVNVKLVMQLSQSIKRRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ GK + + I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMNLREHVLRIVYQELVALMGGAGKVDLSQQ-----TILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K ++CADTFR GA+ QL K +P +G E D + I EG++ F
Sbjct: 116 LARYFQRKGLKVGVICADTFRPGAYKQLSTLCAKVNVPIFGDPAEKDALLIVREGIKRFA 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ +++I+DT GRH E L +E+ ++E P+ V+D+++GQ A +QA+ F +++
Sbjct: 176 E--TEVVIIDTQGRHALEDDLIQEIIDINEIAKPEHRWLVIDAALGQQAAEQARRFNEAI 233
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TKMDG AKGGGALSAV+ TKS ++FIG GE +D+ E FD F+SRLLGMGD
Sbjct: 234 EIDGVLITKMDGTAKGGGALSAVSETKSGIVFIGAGETIDDLERFDPDGFISRLLGMGDL 293
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
++ EV+ D++ + + + G FTLR M+
Sbjct: 294 KALAERAEEVMA-DEEMD-VNAMLRGKFTLRDMY 325
>gi|330834334|ref|YP_004409062.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera cuprina Ar-4]
gi|329566473|gb|AEB94578.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera cuprina Ar-4]
Length = 446
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 195/312 (62%), Gaps = 6/312 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+ E + E+ ++L+ +DVQ KLV + IK+ + + + +R + +++EL +
Sbjct: 23 VEEFIKELQKSLISSDVQVKLVLSLTNKIKERLKKETPPSNLERREWFIKVVYDELSALF 82
Query: 88 DPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
K P PK P VIM VG+QG+GKTTT K AY+++++G+K ALV AD +R A +
Sbjct: 83 GGDKEPEVNPK-SNPWVIMLVGVQGTGKTTTAGKLAYFYKRRGYKVALVGADVYRPAALE 141
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEE 204
QL+Q + +P YG SD V I+ GV F E +LII+DT+GRH +E+ L +E
Sbjct: 142 QLRQIGKQINVPVYGEPDSSDAVGISERGVAKFLSERYELIIIDTAGRHGYGEESKLLDE 201
Query: 205 MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 264
M+++ E P+ V+ V+D+S+GQ AFD A+ F ++ +VG++I+TKMDG AKGGGALSAVA
Sbjct: 202 MKEIYEKVKPNEVVLVIDASLGQKAFDLAKKFHEASNVGSIIITKMDGTAKGGGALSAVA 261
Query: 265 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 324
AT + + FIG GE +DE EVF+ + FV+R+LGMGD ++K+ + ++ +
Sbjct: 262 ATGARIKFIGLGEKIDELEVFNPRRFVARILGMGDLEAIIEKMKATEEYESIQNKMKDVI 321
Query: 325 EG--NFTLRIMF 334
G TLR M+
Sbjct: 322 SGKSKLTLRDMY 333
>gi|171185970|ref|YP_001794889.1| GTP-binding signal recognition particle [Pyrobaculum neutrophilum
V24Sta]
gi|226734219|sp|B1Y9L4.1|SRP54_THENV RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|170935182|gb|ACB40443.1| GTP-binding signal recognition particle SRP54 G- domain
[Pyrobaculum neutrophilum V24Sta]
Length = 433
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 187/300 (62%), Gaps = 4/300 (1%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
+ ++++ + IDE L + EI RALL+ADV +V+ K + + AG
Sbjct: 10 KLVEKIRGVSYIDEATLQDLSREIQRALLKADVPLDMVKAFTDAAVKRIKEEKPPAGIPP 69
Query: 72 RRIIQQAIFNELCKMLDPGKP-SFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
R + ++ EL K+L +P F P K KP V++ +G++GSGKTTT K A K+G+
Sbjct: 70 REYLLYVLYEELVKLLGGEQPPEFKPTK-KPYVVLLLGVEGSGKTTTAAKLAKLLVKRGY 128
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K LV DT R AFDQL+Q A K +PFYG D V IA GV+ K N D++IVD
Sbjct: 129 KVGLVETDTVRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIARRGVQNLK--NLDVVIVD 186
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
T+GRH+ E AL +E++ + EA +PD V+ V+D+++G+ A QA+AF + + + +VI+TKM
Sbjct: 187 TAGRHRNEEALLQEVKAIYEAVSPDEVVLVIDATVGKLAAAQAEAFMRYLPIHSVIITKM 246
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
D A+GGGAL+AVA T + V FIG GE +DE E+F + FV+R+LGMGD +++I V
Sbjct: 247 DSTARGGGALAAVAKTGAKVKFIGVGEDVDELEMFIPRKFVARVLGMGDLDALVERIKAV 306
>gi|257075577|ref|ZP_05569938.1| signal recognition particle protein Srp54 [Ferroplasma acidarmanus
fer1]
Length = 457
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 199/337 (59%), Gaps = 7/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ ++++S ++ ID+ + E EI RALL+ADV KLV ++ +++
Sbjct: 1 MVLDNLSESLKSIMRKISGSSFIDKDTIKEVTKEIQRALLKADVNVKLVLKLTNTVQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + I + I+ EL K+L +F K P IM VGL G+GKTTT K
Sbjct: 61 LNEKPPAGMTAQDYIIRVIYEELLKILGT-DSNFDLK---PQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A KKG L+ AD R GAF+QL+Q + FYG E + ++I G++
Sbjct: 117 LARLFMKKGLSTGLIAADVHRPGAFEQLQQISGDVNCGFYGEKEEKNALKIVRNGIKEL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ + I+DTSGR + L +E+ ++ E NPD V+FV+D+++GQ A QA+ +V
Sbjct: 176 -EDFKIKIIDTSGRDSLDQELIDEVHEIKEKINPDTVLFVIDATLGQQAGPQAKTLHDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
++ VI+TKMDG K GGALSAVA +SPV FIGTGEHMD+ ++F+ K F+SRLLGMGD
Sbjct: 235 NIDGVIITKMDGTGKAGGALSAVADIQSPVYFIGTGEHMDDIQIFNPKKFLSRLLGMGDI 294
Query: 301 SGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMFSL 336
M+ + E +++ E L KL G F L+ M+ +
Sbjct: 295 DALMEVVKETNITEEEAEASLDKLMSGKFDLKDMYDV 331
>gi|297526052|ref|YP_003668076.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Staphylothermus hellenicus DSM 12710]
gi|297254968|gb|ADI31177.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Staphylothermus hellenicus DSM 12710]
Length = 444
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/335 (39%), Positives = 202/335 (60%), Gaps = 5/335 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL + ++SR + + E+ + E + ++ + L++ADV +LV E+ I++
Sbjct: 4 MVLDGVRKALSRFLSGKGDY----ERAVKEFIRDLQKELIKADVNVRLVLELTKKIRERA 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G +R ++ EL K + K KP V++ VGLQGSGKTTT K
Sbjct: 60 LEEEPPPGITRREWFINIVYEELSKFFGGDRKPDIKPKKKPWVMLLVGLQGSGKTTTAAK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY++ +G++ LV ADT+R A+DQLKQ + +P YG D V IA GVE F
Sbjct: 120 LAYYYKLEGYRVGLVTADTYRPAAYDQLKQLGEQIGVPVYGEPNNKDAVEIARRGVEYFV 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D++IVDT+GRH +E L +EMR+++E PD V+ V+D++IGQ A + A+ F +
Sbjct: 180 SRGFDIVIVDTAGRHHREEDLLKEMREIAENIKPDEVVLVIDAAIGQQAHNLAKKFHTAT 239
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G++IVTK+DG AKGGGALSAVA T + + FIGTGE +DE EVF FV+R+LG+GD
Sbjct: 240 PIGSIIVTKLDGTAKGGGALSAVAVTGATIKFIGTGEKIDELEVFRPPRFVARILGIGDL 299
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
G ++K+ + + ++ + LS G +R+++
Sbjct: 300 EGLVEKVRRIKVEFTEKDVEEFLS-GRLNMRLVYK 333
>gi|448401706|ref|ZP_21571772.1| signal recognition particle protein Srp54 [Haloterrigena limicola
JCM 13563]
gi|445666396|gb|ELZ19062.1| signal recognition particle protein Srp54 [Haloterrigena limicola
JCM 13563]
Length = 463
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ + + PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEDIEDVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ E+ D PE + +G FTL M
Sbjct: 295 SQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDM 330
>gi|170291202|ref|YP_001738018.1| GTP-binding signal recognition particle [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175282|gb|ACB08335.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Candidatus Korarchaeum cryptofilum OPF8]
Length = 437
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 142/331 (42%), Positives = 209/331 (63%), Gaps = 8/331 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S+ A+ ++ ++IDE +NE + E+ R+L++ADV KLV E+ IK+
Sbjct: 1 MVLEKLGSSLRNAVSKIMGKSVIDEAAVNEFVREVQRSLIEADVDVKLVLEISRRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS-VIMFVGLQGSGKTTTCT 119
+ G ++R + + ++ EL +L KP+ P + K + VIM VG++GSGKTTT
Sbjct: 61 LKESPPPGFSRRDLAVKILYEELTNLLGR-KPAEIPMESKKTNVIMMVGIEGSGKTTTVA 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A++ K+ K ++ AD R + Q++Q IP + S DPV I EG+E F
Sbjct: 120 KLAFWLSKRFGKVGIISADVMRPASKLQIEQ-LVGPDIPVF-SKESKDPVEIMREGIEFF 177
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+E + +I+DT+GRHK E++L E+ E PDLVI +D +IGQAA+ QA+AF +
Sbjct: 178 KRERYNFVIIDTAGRHKDESSLMSELDAYRE-IGPDLVILTIDGTIGQAAYAQARAFAEK 236
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V VG VIVTK+DG AKGGGALSAVAA+ +P++FIGTGE +D+ E FD + FVSRLLG GD
Sbjct: 237 VPVGGVIVTKLDGAAKGGGALSAVAASGAPILFIGTGERVDDLERFDPERFVSRLLGGGD 296
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
+I E ++ L++++S+G F L
Sbjct: 297 IIELAMRIEEAF---KESRLMERMSKGKFDL 324
>gi|354609783|ref|ZP_09027739.1| Signal recognition 54 kDa protein [Halobacterium sp. DL1]
gi|353194603|gb|EHB60105.1| Signal recognition 54 kDa protein [Halobacterium sp. DL1]
Length = 460
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 204/339 (60%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ +++ + EI R+LLQADV LV ++ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRISEEDVDDVVKEIQRSLLQADVDVSLVMDLSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +G + R + + ++ EL +++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPSGTSARDHVLRIVYEELVELV--GDSTNIPLEDQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMTERAEVEFYGDPDGEDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ A +PD + V+D++IGQ A DQA+ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLISEIEEIERAVDPDRNLLVLDAAIGQGAKDQAKQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVTITKLDGTAKGGGALTAVNETGSTIAFLGTGETVQDVERFEPDSFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIM 333
+++ + Q+ PE + K G FTL M
Sbjct: 295 KQLTERVERAMHETQEGEDDWDPEDMMK---GEFTLHDM 330
>gi|385804856|ref|YP_005841256.1| signal recognition particle protein [Haloquadratum walsbyi C23]
gi|339730348|emb|CCC41677.1| signal recognition particle 54K protein [Haloquadratum walsbyi C23]
Length = 466
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATT 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH EA L +E+ + PD + V+D++IGQ A QA+ F ++
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAIDSTVAPDRSLLVLDAAIGQGAKQQAREFNNAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIM 333
+++ + Q+ PE + EG+FTL+ M
Sbjct: 295 KQLSERVERAMAETQEADDDWDPE---DIMEGSFTLKDM 330
>gi|148508291|gb|ABQ76075.1| signal recognition particle 54K protein [uncultured haloarchaeon]
Length = 465
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH EA L +E+ + PD + V+D++IGQ A QA+ F ++
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAIDSTVAPDRSLLVLDAAIGQGAKQQAREFNNAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIM 333
+++ + Q+ PE + EG+FTL+ M
Sbjct: 295 KQLSERVERAMAETQEADDDWDPE---DIMEGSFTLKDM 330
>gi|110669292|ref|YP_659103.1| signal recognition particle 54K protein [Haloquadratum walsbyi DSM
16790]
gi|121687082|sp|Q18EV2.1|SRP54_HALWD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|109627039|emb|CAJ53515.1| signal recognition particle 54K protein [Haloquadratum walsbyi DSM
16790]
Length = 466
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH EA L +E+ + PD + V+D++IGQ A QA+ F ++
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAIDSTVAPDRSLLVLDAAIGQGAKQQAREFNNAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIM 333
+++ + Q+ PE + EG+FTL+ M
Sbjct: 295 KQLSERVERAMAETQEADDDWDPE---DIMEGSFTLKDM 330
>gi|389845623|ref|YP_006347862.1| signal recognition particle protein [Haloferax mediterranei ATCC
33500]
gi|448616760|ref|ZP_21665470.1| signal recognition particle protein Srp54 [Haloferax mediterranei
ATCC 33500]
gi|388242929|gb|AFK17875.1| signal recognition particle 54K protein [Haloferax mediterranei
ATCC 33500]
gi|445751415|gb|EMA02852.1| signal recognition particle protein Srp54 [Haloferax mediterranei
ATCC 33500]
Length = 464
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 204/339 (60%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTDIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ ++ IVDT+GRH E L E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TEDAEVHIVDTAGRHALEDDLIAEIEEIESVVQPDLNMLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE ++ +G+FTL+ M
Sbjct: 295 KQLSERVERAMSETQAEDEDWDPE---EMMQGSFTLKDM 330
>gi|268323505|emb|CBH37093.1| signal recognition 54 kDa protein [uncultured archaeon]
Length = 443
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 209/335 (62%), Gaps = 14/335 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +L S+ +I++++ A ID++ ++E + +I RALLQADV+ LV+E+ +I++
Sbjct: 1 MLGKLSSSLKESIRKIAKAKRIDKRTVDELVRDIQRALLQADVKISLVKELSDHIRERSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ + N R + + ++ EL ++ GK P K P IM VGL G+GKT++C K
Sbjct: 61 KEKMLL--NPREHVIKVVYEELINII--GKGVEVPLK--PQKIMMVGLHGAGKTSSCAKL 114
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY-GSYTESDPVRIAVEGVETFK 180
A Y QKKG KPA++CAD +R GA DQL+Q K +PFY G + + +RI GV F
Sbjct: 115 ARYFQKKGLKPAVICADVYRPGASDQLRQLCDKIGVPFYDGQPEDRNVLRIVTSGVNEFD 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K D+ I+DT+GRH E + +E+ + +AT P+ V+D+SIGQ A QA+AF ++
Sbjct: 175 K--YDIKIIDTAGRHALEPEMIDEIMDIEKATKPEQRFIVLDASIGQQASVQAKAFDDAI 232
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ +I+TKMDG AKGGGALSAVA T S V FIGTGE +D+FE F+ F+SRLLGMGD
Sbjct: 233 GITGIIITKMDGTAKGGGALSAVAETDSGVAFIGTGETVDDFEKFESDGFISRLLGMGDI 292
Query: 301 SGFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMF 334
+ E + P D ++L+ G FTL+ ++
Sbjct: 293 KSLIAMAEESLNPEDVDVDILK----GKFTLKDLY 323
>gi|429191533|ref|YP_007177211.1| signal recognition particle GTPase [Natronobacterium gregoryi SP2]
gi|448325331|ref|ZP_21514725.1| signal recognition particle protein Srp54 [Natronobacterium
gregoryi SP2]
gi|429135751|gb|AFZ72762.1| signal recognition particle GTPase [Natronobacterium gregoryi SP2]
gi|445615834|gb|ELY69473.1| signal recognition particle protein Srp54 [Natronobacterium
gregoryi SP2]
Length = 463
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 197/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + E + EI R+L+ ADV LV+E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRVSEEDVEEIVKEIQRSLISADVDIALVQELSDNIEARA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLSIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAQEMAERAEVDFYGDPDADDPVEIARQGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TEEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIM 333
+++ + D PE + +GNFTL M
Sbjct: 295 GQLAERVERAMEQTDLEEDDWDPE---DMLQGNFTLNDM 330
>gi|76800703|ref|YP_325711.1| signal recognition particle 54K protein [Natronomonas pharaonis DSM
2160]
gi|121718419|sp|Q3IUP1.1|SRP54_NATPD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|76556568|emb|CAI48139.1| signal recognition particle 54K protein [Natronomonas pharaonis DSM
2160]
Length = 466
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 200/338 (59%), Gaps = 14/338 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T + E + E + EI R+LL ADV LV ++ +I++
Sbjct: 1 MVLDDLGSSLRGTLDKLQGKTTLSEDDVEEIVKEIQRSLLSADVDVDLVMDLSDSIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ E+ +++ G+ + P + I+ GLQGSGKTTT K
Sbjct: 61 LDEEPPAGTTARDHVLKIVYEEMVELV--GESTALPLE--EQTIVLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDSDDPVEIAERGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E AL +E+ + A +PD + V+D++IGQ A DQA+ F +V
Sbjct: 175 TADADVHIVDTAGRHALEEALIDELEAIESAVDPDRNLLVLDAAIGQGAKDQAERFHDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV-----PMDQQPELLQKLSEGNFTLRIM 333
+++ + D PE L K G FTL+ M
Sbjct: 295 KQLSERVERAMEETQAEEDWDPEDLMK---GEFTLKDM 329
>gi|154151417|ref|YP_001405035.1| signal recognition particle protein Srp54 [Methanoregula boonei
6A8]
gi|153999969|gb|ABS56392.1| GTP-binding signal recognition particle SRP54, G- domain
[Methanoregula boonei 6A8]
Length = 441
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 200/329 (60%), Gaps = 8/329 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L GS+ A+++++ ++D ++E + + RALL ADV KLV ++ I+ ++L
Sbjct: 5 LSGSLKDALKKLAGKAVVDRAAVDELVKNLQRALLSADVNVKLVMDLSKAIRTRSLDEEL 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
N R + + ++ EL +++ + K +P VI+ GLQGSGKTTT K A Y
Sbjct: 65 PKNTNVREHVLRIVYQELVRLV----YASADLKLEPQVILMAGLQGSGKTTTTAKIARYF 120
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
QKKG K ++CADTFR GA+DQL K +P +G+ +D +I EG+ K + +
Sbjct: 121 QKKGMKVGVICADTFRPGAYDQLSTLCAKINVPCFGNPKVTDARQIVREGLVAVKDQ--E 178
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+IIVDT GRH E L +E+ ++ T V+D+++GQ A +QA+ F +++ + V
Sbjct: 179 VIIVDTQGRHALEPDLIQEIIDLNALTKASHRWLVIDAALGQQASEQAKRFHEAIGIDGV 238
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I+TKMDG AKGGGALSAVA TKS ++FIG GE +++ E FD F+SRLLGMGD ++
Sbjct: 239 IITKMDGTAKGGGALSAVAETKSGIVFIGAGETIEDLERFDANGFISRLLGMGDLQALVE 298
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
K+ E D+ ++ + +G+FTLR M+
Sbjct: 299 KVQEAQMADEVD--MEAMMKGHFTLRDMY 325
>gi|448611250|ref|ZP_21661884.1| signal recognition particle protein Srp54 [Haloferax mucosum ATCC
BAA-1512]
gi|445743682|gb|ELZ95163.1| signal recognition particle protein Srp54 [Haloferax mucosum ATCC
BAA-1512]
Length = 464
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 203/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ ++ IVDT+GRH E L +E+ ++ PDL + V+D++IGQ A +QAQ F +S+
Sbjct: 177 --DAEVHIVDTAGRHALEDDLIDEIEEIESVVQPDLNMLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV------PMDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + K G+FTL+ M
Sbjct: 295 KQLSERVERAMTETQAEDEDWDPEEMMK---GSFTLKDM 330
>gi|448347056|ref|ZP_21535935.1| signal recognition particle protein Srp54 [Natrinema altunense JCM
12890]
gi|445631393|gb|ELY84625.1| signal recognition particle protein Srp54 [Natrinema altunense JCM
12890]
Length = 464
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 201/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ ++ D PE + +G FTL M
Sbjct: 295 SQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDM 330
>gi|336252741|ref|YP_004595848.1| Signal recognition 54 kDa protein [Halopiger xanaduensis SH-6]
gi|335336730|gb|AEH35969.1| Signal recognition 54 kDa protein [Halopiger xanaduensis SH-6]
Length = 464
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 201/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+L+ ADV LV+E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDVEEIVKEIQRSLISADVDISLVQELSGNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q ++ A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAEEMAGRAEVDYYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ E D PE + +G FTL M
Sbjct: 295 SQLAERVERAMLETETEEDDWDPE---DMLQGQFTLHDM 330
>gi|289581472|ref|YP_003479938.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Natrialba magadii ATCC 43099]
gi|448283112|ref|ZP_21474391.1| signal recognition particle protein Srp54 [Natrialba magadii ATCC
43099]
gi|289531025|gb|ADD05376.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrialba magadii ATCC 43099]
gi|445574820|gb|ELY29308.1| signal recognition particle protein Srp54 [Natrialba magadii ATCC
43099]
Length = 464
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 199/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIAEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIM 333
+++ + D PE + +G FTL M
Sbjct: 295 GQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDM 330
>gi|448303902|ref|ZP_21493848.1| signal recognition particle protein Srp54 [Natronorubrum
sulfidifaciens JCM 14089]
gi|445592529|gb|ELY46716.1| signal recognition particle protein Srp54 [Natronorubrum
sulfidifaciens JCM 14089]
Length = 460
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q +Q A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAQQMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E+ D +PE + G FTL M
Sbjct: 295 GQLAERVERAMEQTEIEDDDWEPE---DMLSGQFTLNDM 330
>gi|448380959|ref|ZP_21561316.1| signal recognition particle protein Srp54 [Haloterrigena
thermotolerans DSM 11522]
gi|445663615|gb|ELZ16358.1| signal recognition particle protein Srp54 [Haloterrigena
thermotolerans DSM 11522]
Length = 464
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 201/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVEFYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ E M++ + + +G FTL M
Sbjct: 295 SQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDM 330
>gi|13541823|ref|NP_111511.1| signal recognition particle protein Srp54 [Thermoplasma volcanium
GSS1]
gi|21362960|sp|Q979Y8.1|SRP54_THEVO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|14325260|dbj|BAB60164.1| signal recognition particle protein srp54 [Thermoplasma volcanium
GSS1]
Length = 455
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 199/337 (59%), Gaps = 7/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ I++++ +T ID+ + E ++ R LL+ADV + V + +++
Sbjct: 1 MVLESLSSSLRETIRKITGSTYIDKNTVKEISKDLQRILLKADVNVQTVLNITKEMERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G + + + I+ EL K+L G+PS + KP IM VGL G GKTT+ K
Sbjct: 61 LEEKPPVGMAHQDYMVKIIYEELLKIL--GEPSNV--ELKPQTIMLVGLYGHGKTTSAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ + KKG L+ AD R A++QL+Q A FYG E DPV+I G+E K
Sbjct: 117 LSRFFMKKGLSAGLIAADVHRYAAYEQLQQIAESVNAKFYGDPKEKDPVKIIKNGLEVLK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + I+DTSGR ++ L EE+R++ EA PD V+ V+D+++GQ A +++A +V
Sbjct: 177 --DAQVKIIDTSGRDSLDSDLIEEIRRIKEAVKPDQVLMVIDATMGQQAGPESKAINDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V +I+TKMDG AKGGGALSAVA + P+ FIGTGEHMD+ E+FD K F+SRLLG+GD
Sbjct: 235 GVTGIIITKMDGTAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRLLGLGDL 294
Query: 301 SGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMFSL 336
+ + E + ++ + +KL G F L+ M+ +
Sbjct: 295 ETLFETVKEANITEEEAQKSFEKLMTGKFNLKDMYDV 331
>gi|397772073|ref|YP_006539619.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrinema sp. J7-2]
gi|448342497|ref|ZP_21531447.1| signal recognition particle protein Srp54 [Natrinema gari JCM
14663]
gi|397681166|gb|AFO55543.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrinema sp. J7-2]
gi|445625512|gb|ELY78869.1| signal recognition particle protein Srp54 [Natrinema gari JCM
14663]
Length = 464
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEEDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ ++ D PE + +G FTL M
Sbjct: 295 SQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDM 330
>gi|433592885|ref|YP_007282381.1| signal recognition particle GTPase [Natrinema pellirubrum DSM
15624]
gi|448335331|ref|ZP_21524480.1| signal recognition particle protein Srp54 [Natrinema pellirubrum
DSM 15624]
gi|433307665|gb|AGB33477.1| signal recognition particle GTPase [Natrinema pellirubrum DSM
15624]
gi|445617570|gb|ELY71166.1| signal recognition particle protein Srp54 [Natrinema pellirubrum
DSM 15624]
Length = 463
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 201/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVEFYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ E M++ + + +G FTL M
Sbjct: 295 SQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDM 330
>gi|448357209|ref|ZP_21545915.1| signal recognition particle protein Srp54 [Natrialba chahannaoensis
JCM 10990]
gi|445650017|gb|ELZ02948.1| signal recognition particle protein Srp54 [Natrialba chahannaoensis
JCM 10990]
Length = 462
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ ++ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIDEIEEIEGVAQPDTSLLVLDAAIGQGAKEQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIM 333
+++ + D PE + +G FTL M
Sbjct: 295 GQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDM 330
>gi|448320595|ref|ZP_21510081.1| signal recognition particle protein Srp54 [Natronococcus
amylolyticus DSM 10524]
gi|445605497|gb|ELY59419.1| signal recognition particle protein Srp54 [Natronococcus
amylolyticus DSM 10524]
Length = 466
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/308 (40%), Positives = 188/308 (61%), Gaps = 6/308 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLE--EQTILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ E +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TGEADVHIVDTAGRHALEDDLIDEIEQIEETVDPDKSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH 308
+++
Sbjct: 295 GQLAERVE 302
>gi|448337308|ref|ZP_21526388.1| signal recognition particle protein Srp54 [Natrinema pallidum DSM
3751]
gi|445625973|gb|ELY79324.1| signal recognition particle protein Srp54 [Natrinema pallidum DSM
3751]
Length = 463
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEEDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ ++ D PE + +G FTL M
Sbjct: 295 SQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDM 330
>gi|289596592|ref|YP_003483288.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Aciduliprofundum boonei T469]
gi|289534379|gb|ADD08726.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Aciduliprofundum boonei T469]
Length = 449
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 200/339 (58%), Gaps = 7/339 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA E V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIAREAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ + I DTSGRH E L EE++ + E PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKEIIQPDEIFLVLDATIGQQAGKQAKAFHDAVG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 235 VTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDLE 294
Query: 302 GFMD-KIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQ 339
++ + ++ ++++++ G F L+ M+ + Q
Sbjct: 295 TLLETAKELELKEEEAEKVMERMMSGKFNLKDMYEIWEQ 333
>gi|409721153|ref|ZP_11269367.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
gi|448722162|ref|ZP_21704701.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
gi|445790153|gb|EMA40823.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
Length = 468
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 189/311 (60%), Gaps = 6/311 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +D + E + EI R+L+QADV+ LV ++ I+
Sbjct: 1 MVLDDLGSSLRGTLNRLQGKTRLDADDVEEVVREIQRSLIQADVEISLVMDLSDRIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTTARDFVLRIVYEEMVDLV--GESTDLPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ A +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQSKQMAERAEVTFYGDPDSDDPVEIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ ++ IVDT+GRH E L +E+R + + PD + VMD++IGQ A DQA+ F+ ++
Sbjct: 175 ADEAEVKIVDTAGRHALEDDLIDEIRAIDDVVQPDRSLLVMDAAIGQGAKDQARRFEDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV 311
+++ +
Sbjct: 295 KQLAERVERAM 305
>gi|383619954|ref|ZP_09946360.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
gi|448696432|ref|ZP_21697906.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
gi|445783638|gb|EMA34466.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
Length = 462
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 208/339 (61%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ ++E + EI R+L+ ADV LV+E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVDEIVKEIQRSLISADVDISLVQELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 MEEEPPAGTPARDFVLRIVYEELVELI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMAERAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ + PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEDVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
S +++ E+ D PE + +G FTL M
Sbjct: 295 SQLAERVERAMQQTEIEEDDWDPE---DMLQGQFTLNDM 330
>gi|300709660|ref|YP_003735474.1| signal recognition 54 kDa protein [Halalkalicoccus jeotgali B3]
gi|448297569|ref|ZP_21487615.1| signal recognition particle protein Srp54 [Halalkalicoccus jeotgali
B3]
gi|299123343|gb|ADJ13682.1| signal recognition 54 kDa protein [Halalkalicoccus jeotgali B3]
gi|445579878|gb|ELY34271.1| signal recognition particle protein Srp54 [Halalkalicoccus jeotgali
B3]
Length = 462
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 197/336 (58%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++++ + + E+ + + EI R+LLQADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRGTLEELRGKSRLTEEDVQAVVKEIQRSLLQADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL ++ G + P + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEELVALV--GDSTELPLE--EQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDAEDPVEIARRGME--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ + EA PD + V+D++IGQ A +QA+ F++S+
Sbjct: 175 TADADVHIVDTAGRHALEDELIKEIEAIGEAVEPDRSLLVLDAAIGQGAKEQARRFEESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ F+SRLLGMGD
Sbjct: 235 GIQGVAITKLDGTAKGGGALTAVNETDSTIAFLGTGEEVDDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + L G FTL M
Sbjct: 295 KQLTERVERAMAETQEEEEDWDPEDLLSGTFTLHDM 330
>gi|254169167|ref|ZP_04876003.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
gi|197621902|gb|EDY34481.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
Length = 366
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 200/339 (58%), Gaps = 7/339 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA E V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIAREAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ + I DTSGRH E L EE++ + E PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKEIIQPDEIFLVLDATIGQQAGKQAKAFHDAVG 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 235 VTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDLE 294
Query: 302 GFMD-KIHEVVPMDQQPELLQKLSEGNFTLRIMFSLCFQ 339
++ + ++ ++++++ G F L+ M+ + Q
Sbjct: 295 TLLETAKELELKEEEAEKVMERMMSGKFNLKDMYEIWEQ 333
>gi|448302117|ref|ZP_21492101.1| signal recognition particle protein Srp54 [Natronorubrum tibetense
GA33]
gi|445582113|gb|ELY36458.1| signal recognition particle protein Srp54 [Natronorubrum tibetense
GA33]
Length = 465
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 201/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q ++ A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAEEMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEEDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E M++ + + +G FTL M
Sbjct: 295 GQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDM 330
>gi|435845547|ref|YP_007307797.1| signal recognition particle GTPase [Natronococcus occultus SP4]
gi|433671815|gb|AGB36007.1| signal recognition particle GTPase [Natronococcus occultus SP4]
Length = 464
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E + E + EI R+LL ADV LV E+ +I++
Sbjct: 1 MVLDDLGTSLRGTLDKLRGKSRISEDDIEEIVKEIQRSLLSADVDVSLVMELSDSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA+V DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVVQTDTFRPGAYDQAKEMCERAEVDFYGNPDADDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ +A PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEDAVEPDKSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T+S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTESSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQK------LSEGNFTLRIM 333
+++ + QQ ++ ++ + G FTL M
Sbjct: 295 GQLAERVERAM---QQTDVEEEEWDPEDMLTGQFTLNDM 330
>gi|397779468|ref|YP_006543941.1| Signal recognition 54 kDa protein [Methanoculleus bourgensis MS2]
gi|396937970|emb|CCJ35225.1| Signal recognition 54 kDa protein AltName: Full=SRP54
[Methanoculleus bourgensis MS2]
Length = 442
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 208/334 (62%), Gaps = 9/334 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ A+++++ T+ID ++E + ++ RALLQADV KLV ++ IK+
Sbjct: 1 MLDNLGASLKDAVKKLAGKTVIDRAAVDELVRDLQRALLQADVNVKLVMQLSQAIKQRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL +++ PG + P+ I+ GLQGSGKTTT K
Sbjct: 61 DEEPPKGMGAREHVLRIVYQELVRLMGTPGAVTLGPQ-----TILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + ++CADTFR GA+DQLK + +P +G E D ++I EG+ F+
Sbjct: 116 LARFFQRKGLRVGVICADTFRPGAYDQLKTLCDRISVPCFGDPKEPDALKIVREGLPRFR 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
K ++II+DT GRH E L EE+ ++E ++ D V+D+++GQ A +QA+ F +++
Sbjct: 176 K-LYEVIIIDTQGRHALEEHLIEEIININEISHADHRWLVIDAALGQQASEQARRFHEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V+VTKMDG A+GGGALSAVA T+S ++FIG+GE +++ E F+ F+SRLLGMGD
Sbjct: 235 GIDGVLVTKMDGTARGGGALSAVAETQSGIVFIGSGETIEDLERFNPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+++ E V + + + +G FTLR M+
Sbjct: 295 KALVERAEEAVSAEDID--VNAMLKGKFTLRDMY 326
>gi|322368150|ref|ZP_08042719.1| signal recognition 54 kDa protein [Haladaptatus paucihalophilus
DX253]
gi|320552166|gb|EFW93811.1| signal recognition 54 kDa protein [Haladaptatus paucihalophilus
DX253]
Length = 464
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 193/311 (62%), Gaps = 6/311 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++S + + E + E + EI R+LLQADV LV ++ ++IK+
Sbjct: 1 MVLDNLGSSLRGSLDKLSGKSRVSEDDVEEIVKEIQRSLLQADVDVSLVMDLSSSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + ++ EL ++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHVLSIVYEELVGLV--GESTEIPLENQ--TILLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ ++A++ FYG DPV IA +G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCSRAEVDFYGDPDNEDPVDIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ ++ +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TADADIHIVDTAGRHALEDDLIDEIEEIESVVDPDRNLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVNETDSSIAFLGSGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV 311
+++ +
Sbjct: 295 KQLTERVERAM 305
>gi|448354426|ref|ZP_21543183.1| signal recognition particle protein Srp54 [Natrialba hulunbeirensis
JCM 10989]
gi|445637943|gb|ELY91090.1| signal recognition particle protein Srp54 [Natrialba hulunbeirensis
JCM 10989]
Length = 493
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 199/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 32 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKARA 91
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 92 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 147
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 148 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVDIARKGLEATS 207
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ ++ PD + V+D++IGQ A +QAQ F +S+
Sbjct: 208 E--ADVHIVDTAGRHALEDDLIDEIEEIEGVAQPDTSLLVLDAAIGQGAKEQAQQFDESI 265
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 266 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGDL 325
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIM 333
+++ + D PE + +G FTL M
Sbjct: 326 GQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDM 361
>gi|374629551|ref|ZP_09701936.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoplanus limicola DSM 2279]
gi|373907664|gb|EHQ35768.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoplanus limicola DSM 2279]
Length = 439
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 199/333 (59%), Gaps = 8/333 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + A+++++ T+ID + E + ++ R LLQADV KLV + IKK
Sbjct: 1 MLDRLGTGLKDAVKKLAGKTVIDRAAVEELVKDLQRVLLQADVNVKLVMNLSKAIKKRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + R + + ++ EL ++ T G P +I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMSVREHVLRIVYQELVNLMGD---EVTVTLG-PQIILMAGLQGSGKTTTTGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + ++CAD FR GA+DQLK K +P YG +D V+I G+ K
Sbjct: 117 ARYFQRKGLRVGVICADVFRPGAYDQLKNLCNKVNVPCYGEPGVTDAVKIVENGIRELK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +++I+DT GRH E L E+ ++ T V+D+++GQ A +QA F +++S
Sbjct: 176 -NTEVLIIDTQGRHALEDDLISEIIDLNNLTKATHRWLVIDAALGQQAKEQAARFHEAIS 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGALSAVA T S ++F G+GE +++ E FD F+SRLLGMGD
Sbjct: 235 IDGVIITKMDGTAKGGGALSAVAETGSGIVFTGSGETIEDLERFDPDSFISRLLGMGDLK 294
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
++K EV+ D++ + + + +G FTLR M+
Sbjct: 295 SLIEKAEEVMA-DEEFD-VNAMMKGKFTLRDMY 325
>gi|448308178|ref|ZP_21498058.1| signal recognition particle protein Srp54 [Natronorubrum bangense
JCM 10635]
gi|445594431|gb|ELY48589.1| signal recognition particle protein Srp54 [Natronorubrum bangense
JCM 10635]
Length = 463
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 201/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q +Q A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAQQMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A +QA F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKEQASQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ +V D +PE + +G FTL M
Sbjct: 295 GQLAERVERAMEQTQVEDDDWEPE---DMLQGQFTLNDM 330
>gi|88604251|ref|YP_504429.1| signal recognition particle protein Srp54 [Methanospirillum
hungatei JF-1]
gi|88189713|gb|ABD42710.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanospirillum hungatei JF-1]
Length = 437
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/333 (39%), Positives = 199/333 (59%), Gaps = 9/333 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++ A+++++ T+ID + E + ++ RALLQADV K V ++ IKK
Sbjct: 1 MLDNLGSNLKDALRKLAGKTVIDRAAVEELVKDLQRALLQADVNVKQVMQLSQTIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G R + + ++ EL ++ K T K +I+ GLQGSGKTTT K
Sbjct: 61 DEQPPKGVTAREHVLRIVYEELVALVGQ-KVEVTLGK---QIILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++KG + A++CADTFR GA+ Q+K K +P YG +E D +I EG+ K+
Sbjct: 117 ARFFKRKGMRVAVICADTFRPGAYTQIKTLCDKVHVPCYGDPSEHDARKIVREGLAQLKE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E +IIVDT GRH E L E+ ++E T V+D+++GQ A +QA+ F ++VS
Sbjct: 177 E---VIIVDTQGRHALEDDLITEIIDLNEITKATHRWLVLDAALGQQAREQARRFHEAVS 233
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGA+SAVA T S ++FIG GE +++ E FD ++SRLLGMGD
Sbjct: 234 IDGVIITKMDGTAKGGGAMSAVAETGSGIVFIGQGETIEDLEWFDPNSYISRLLGMGDLK 293
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+++ E + D+Q + + G FTLR M+
Sbjct: 294 ALAERVQESI--DEQDIDVNAMLSGKFTLRDMY 324
>gi|448312267|ref|ZP_21502014.1| signal recognition particle protein Srp54 [Natronolimnobius
innermongolicus JCM 12255]
gi|445601867|gb|ELY55848.1| signal recognition particle protein Srp54 [Natronolimnobius
innermongolicus JCM 12255]
Length = 465
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 198/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAKEMCERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ + PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIDEIEDIEGVVQPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ +V D PE + +G+FTL M
Sbjct: 295 GQLAERVERAMEQTQVEEDDWDPE---DMLQGSFTLHDM 330
>gi|448424654|ref|ZP_21582510.1| signal recognition particle protein Srp54 [Halorubrum terrestre JCM
10247]
gi|448481727|ref|ZP_21605057.1| signal recognition particle protein Srp54 [Halorubrum arcis JCM
13916]
gi|448504282|ref|ZP_21613899.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 9100]
gi|448521573|ref|ZP_21618231.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 10118]
gi|445681864|gb|ELZ34289.1| signal recognition particle protein Srp54 [Halorubrum terrestre JCM
10247]
gi|445702163|gb|ELZ54123.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 9100]
gi|445702513|gb|ELZ54461.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 10118]
gi|445821674|gb|EMA71461.1| signal recognition particle protein Srp54 [Halorubrum arcis JCM
13916]
Length = 463
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A DQA+ F++S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKDQARQFEKSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIM 333
+++ + Q+ PE + +G FTL+ M
Sbjct: 295 KQLSERVERAMQETQEEDGDWDPE---DMLQGEFTLKDM 330
>gi|448435673|ref|ZP_21586809.1| signal recognition particle protein Srp54 [Halorubrum
tebenquichense DSM 14210]
gi|445683398|gb|ELZ35794.1| signal recognition particle protein Srp54 [Halorubrum
tebenquichense DSM 14210]
Length = 464
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 200/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ T + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKTTLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L +E+ ++ +PD + V+D++IGQ A +QA+ F+ S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIEGVVDPDRSLLVLDAAIGQGAKEQARQFEASI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + +G FTL+ M
Sbjct: 295 KQLSERVERAMQETQDEDDDWDPEDMLKGEFTLKDM 330
>gi|335441201|ref|ZP_08561922.1| signal recognition particle protein Srp54 [Halorhabdus tiamatea
SARL4B]
gi|334888372|gb|EGM26671.1| signal recognition particle protein Srp54 [Halorhabdus tiamatea
SARL4B]
Length = 465
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 203/336 (60%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+ + + I E+ + + EI R+LLQADV LV ++ +I+
Sbjct: 1 MVLDDLGSSLRGALDGLRGKSRISEEDVQAVVKEIQRSLLQADVDVDLVMDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL +++ G+ + P + P I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTSARDWVLRIVYEELVELV--GESTELPLE--PQTIVLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT+R GA++Q ++ A +A++ FYG E D V+IA EG+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTWRPGAYEQAEEMAERAEVDFYGDPDEDDAVKIAREGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ + +PD + V+D++IGQ A +QA F+ +V
Sbjct: 177 --DADVQIVDTAGRHALEDGLIDELEDIESVADPDHNLLVLDAAIGQEAKEQASRFEGAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGTGETVKDVERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIM 333
+++ + Q+ E + + +G FTL+ M
Sbjct: 295 KQLTERVERAMEETQEEEGDWGPEDMLDGEFTLKDM 330
>gi|307353993|ref|YP_003895044.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanoplanus petrolearius DSM 11571]
gi|307157226|gb|ADN36606.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanoplanus petrolearius DSM 11571]
Length = 441
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 199/333 (59%), Gaps = 8/333 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + A+++++ T+ID+ + E + ++ R LLQADV KLV + IK+
Sbjct: 1 MLDRLGSGLKDALKKLAGKTVIDKAAVEELVKDLQRVLLQADVNVKLVMNLSKAIKQRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + R + + ++ EL ++ G P I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMSVREHVLRIVYQELVNLMGE---EIEVTLG-PQTILMAGLQGSGKTTTTGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ Y QKKG + ++CAD FR GA+DQLK K +P YG E + V+I G++ K
Sbjct: 117 SRYFQKKGLRVGVICADVFRPGAYDQLKTLCDKVNVPCYGEPGEINAVKIVENGMKQLK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N +++I+DT GRH E L +E+ ++++ + V+D+++GQ A +QA F +++
Sbjct: 176 -NAEVLIIDTQGRHALEDELIDEIIKINDLSKASHRWLVLDAALGQQAREQAARFHDAIN 234
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ VI+TKMDG AKGGGALSAVA T S ++F+G+GE +D+ E FD F+SRLLGMGD
Sbjct: 235 IDGVIITKMDGTAKGGGALSAVAETGSGIVFVGSGETIDDLERFDPDSFISRLLGMGDLK 294
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+++ E + ++ + + +G FTLR M+
Sbjct: 295 SLIERAEEAINAEEVD--VNAMMKGKFTLRDMY 325
>gi|448731425|ref|ZP_21713725.1| signal recognition particle protein Srp54 [Halococcus
saccharolyticus DSM 5350]
gi|445792178|gb|EMA42790.1| signal recognition particle protein Srp54 [Halococcus
saccharolyticus DSM 5350]
Length = 467
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 204/339 (60%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ +I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDSIEQRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GESTDLPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ A +A++ FYG DPV+IA +G+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMAERAEVTFYGDPDADDPVQIARDGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E++++ PD + VMD+++GQ A DQAQ F++++
Sbjct: 175 TEEADIHIVDTAGRHALEEGLIDEIQEIDAVVEPDRSLLVMDAALGQGAKDQAQRFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + EG FTL+ M
Sbjct: 295 KQLAERVERAMADTDTDEEDWDPE---DILEGQFTLKDM 330
>gi|448315945|ref|ZP_21505583.1| signal recognition particle protein Srp54 [Natronococcus jeotgali
DSM 18795]
gi|445610291|gb|ELY64065.1| signal recognition particle protein Srp54 [Natronococcus jeotgali
DSM 18795]
Length = 462
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 187/308 (60%), Gaps = 6/308 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +I++
Sbjct: 1 MVLDDLGTSLRGTLDKLRGKSRVSEEDIGEIVKEIQRSLLSADVDVSLVMELSDSIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMTERAEVDFYGDPDADDPVEIAREGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ Q+ PD + V+D++IGQ A DQA+ F +S+
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIDEIEQIEGVVEPDTSLLVLDAAIGQGAKDQARQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH 308
+++
Sbjct: 295 GQLAERVE 302
>gi|448445207|ref|ZP_21590262.1| signal recognition particle protein Srp54 [Halorubrum saccharovorum
DSM 1137]
gi|445685513|gb|ELZ37867.1| signal recognition particle protein Srp54 [Halorubrum saccharovorum
DSM 1137]
Length = 464
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 202/336 (60%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVDLV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +A +PD + V+D++IGQ A DQA+ F++S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEQAVDPDRSLLVLDAAIGQGAKDQARQFEESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + + +G FTL+ M
Sbjct: 295 KQLSERVERAMEEAQEEDEDWDPEDMLQGEFTLKDM 330
>gi|452207929|ref|YP_007488051.1| signal recognition particle 54K protein [Natronomonas moolapensis
8.8.11]
gi|452084029|emb|CCQ37362.1| signal recognition particle 54K protein [Natronomonas moolapensis
8.8.11]
Length = 464
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 198/335 (59%), Gaps = 8/335 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T + E + + EI R+LL ADV LV + +I++
Sbjct: 1 MVLDDLGSSLRGTLDKLQGKTTLSEDDVEAIVKEIQRSLLSADVDVDLVMALSDSIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ E+ +++ G+ + P + I+ GLQGSGKTTT K
Sbjct: 61 VEEEPPAGTTARDHVLKIVYEEMVELV--GESTDLPLE--EQTIVLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA++Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVVQTDTFRPGAYEQAKEMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L +E+ ++ +PD + V+D++IGQ A DQA+ F +V
Sbjct: 175 TADADVHIVDTAGRHALEEVLIDELERIESVADPDRNLLVLDAAIGQGAKDQAERFHDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVKDVERFEASGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPELL--QKLSEGNFTLRIM 333
+++ + Q E + L +G FTL+ M
Sbjct: 295 KQLSERVERAMAETQAEEDWDPEDLMQGEFTLKDM 329
>gi|448725559|ref|ZP_21708014.1| signal recognition particle protein Srp54 [Halococcus morrhuae DSM
1307]
gi|445798406|gb|EMA48821.1| signal recognition particle protein Srp54 [Halococcus morrhuae DSM
1307]
Length = 466
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 192/311 (61%), Gaps = 6/311 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDEIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GDSTELPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ ++ A++A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAIIQTDTFRPGAYDQAEEMASRAEVSFYGDPDNDDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E+ + + +PD + VMD++IGQ A DQAQ F++++
Sbjct: 175 TEEADVHIVDTAGRHALEEGLIDEIETIDDTVDPDRRLLVMDAAIGQGAKDQAQRFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GVDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV 311
+++ +
Sbjct: 295 KQLAERVERAM 305
>gi|345006190|ref|YP_004809043.1| Signal recognition 54 kDa protein [halophilic archaeon DL31]
gi|344321816|gb|AEN06670.1| Signal recognition 54 kDa protein [halophilic archaeon DL31]
Length = 462
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 205/336 (61%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + +DE+ + E + EI R+LLQADV+ LV E+ ++I++
Sbjct: 1 MVLDNLGSSLRGTMDTLRGKSRLDEEDVEEIVKEIQRSLLQADVEVDLVMELSSSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R I + ++ E+ +++ G+ + P + P +M GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTSARDHILKIVYEEMVEVV--GESTEIPLE--PQTLMLSGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR G++ Q KQ A A++ FYG DPV+IA +G+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTFRPGSYQQAKQMAENAEVEFYGDPDAEDPVQIARDGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L EE+ ++ A +PD + V+D++IGQ A QA+ F ++
Sbjct: 177 --DADVHIVDTAGRHALEDDLIEEIEEIERAVDPDRNLLVLDAAIGQGAKAQAREFDDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GVDGVTITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIM 333
+++ + Q+ E + + EGNFTL+ M
Sbjct: 295 KQLSERVERAMAETQEGEDDWDPEDMLEGNFTLKDM 330
>gi|14601593|ref|NP_148133.1| signal recognition 54 kDa protein [Aeropyrum pernix K1]
gi|12230645|sp|Q9YB62.1|SRP54_AERPE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|5105423|dbj|BAA80736.1| signal recognition 54 kDa protein [Aeropyrum pernix K1]
Length = 441
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 195/329 (59%), Gaps = 5/329 (1%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+ RA+ + + EK ++ + ++ R L++ADV KLV + IK+ ++ G
Sbjct: 4 GVRRAVAKFLRGGGVYEKAVDAFVKDLQRELIKADVNVKLVLNVTRRIKERALKEEPPPG 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
+R + + ++ EL K+ + P P K P +++ VG+QGSGKTTT K AYY+ +
Sbjct: 64 VTRRDWMIKIVYEELVKLFGGDQEPQVDPPK-TPWIVLLVGVQGSGKTTTAGKLAYYYVR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV +DT R GA++QLK+ A +A FYG E DP IA G+E +++
Sbjct: 123 RGYKVGLVSSDTHRPGAYEQLKRLAEEAGAMFYGE-REGDPAEIARRGLEDLLSRGAEIV 181
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
IVDT+GRH +EA L +EM+ ++ PD V V+D+SIGQ A A+ F +S +G++
Sbjct: 182 IVDTAGRHGHGEEARLLDEMKAIASKVRPDEVALVIDASIGQKAMGLAERFHKSTPIGSI 241
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
IVTKMDG A+GGGAL+A A T + + FIGTGE + E E F + FV+R+LGMGD ++
Sbjct: 242 IVTKMDGTARGGGALTAAAVTGARIKFIGTGETLGELEPFAPRRFVARILGMGDLESLLE 301
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+I + + + + +G T+R ++
Sbjct: 302 RIKSLEEAGELDRAAEDVLKGRITMRTIY 330
>gi|448488716|ref|ZP_21607390.1| signal recognition particle protein Srp54 [Halorubrum
californiensis DSM 19288]
gi|445695664|gb|ELZ47765.1| signal recognition particle protein Srp54 [Halorubrum
californiensis DSM 19288]
Length = 463
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 200/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A DQA+ F++S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKDQARQFEKSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + + +G FTL+ M
Sbjct: 295 KQLSERVERAMQETQEEDEDWDPEDMLQGEFTLKDM 330
>gi|448456638|ref|ZP_21595345.1| signal recognition particle protein Srp54 [Halorubrum lipolyticum
DSM 21995]
gi|445811783|gb|EMA61785.1| signal recognition particle protein Srp54 [Halorubrum lipolyticum
DSM 21995]
Length = 464
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 199/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLRIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDNDDPVAIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A +QA+ F+ S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIESVVDPDRSLLVLDAAIGQGAKEQARQFEASI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + + +G FTL+ M
Sbjct: 295 KQLSERVERAMQETQEEDEDWDPEDMLQGEFTLKDM 330
>gi|448450371|ref|ZP_21592270.1| signal recognition particle protein Srp54 [Halorubrum litoreum JCM
13561]
gi|445812223|gb|EMA62219.1| signal recognition particle protein Srp54 [Halorubrum litoreum JCM
13561]
Length = 463
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 201/339 (59%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A DQA+ F++S+
Sbjct: 175 TADADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKDQARQFEKSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIM 333
+++ + Q+ PE + +G FTL+ M
Sbjct: 295 KQLSERVERAMQETQEEDGDWDPE---DMLQGEFTLKDM 330
>gi|222478931|ref|YP_002565168.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorubrum lacusprofundi ATCC 49239]
gi|254772972|sp|B9LT33.1|SRP54_HALLT RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|222451833|gb|ACM56098.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorubrum lacusprofundi ATCC 49239]
Length = 464
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 200/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDNDDPVAIAREGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ A +PD + V+D++IGQ A +QA+ F++S+
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEIEEIERAVDPDRSLLVLDAAIGQGAKEQARQFEKSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + + +G FTL+ M
Sbjct: 295 KQLSERVERAMAEAQEEDEDWDPEDMLQGEFTLKDM 330
>gi|448738043|ref|ZP_21720074.1| signal recognition particle protein Srp54 [Halococcus thailandensis
JCM 13552]
gi|445802627|gb|EMA52931.1| signal recognition particle protein Srp54 [Halococcus thailandensis
JCM 13552]
Length = 465
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 191/311 (61%), Gaps = 6/311 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDEIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GDSTELPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ ++ A++A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAIIQTDTFRPGAYDQAEEMASRAEVSFYGDPDNDDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E+ + +PD + VMD++IGQ A DQAQ F++++
Sbjct: 175 TEEADVHIVDTAGRHALEEGLIDEIEAIDATVDPDRRLLVMDAAIGQGAKDQAQRFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
V V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GVDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVV 311
+++ +
Sbjct: 295 KQLAERVERAM 305
>gi|448467845|ref|ZP_21599645.1| signal recognition particle protein Srp54 [Halorubrum kocurii JCM
14978]
gi|445811570|gb|EMA61574.1| signal recognition particle protein Srp54 [Halorubrum kocurii JCM
14978]
Length = 464
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 201/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LDEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ A +PD + V+D++IGQ A +QA+ F++S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGAVDPDRSLLVLDAAIGQGAKEQARQFEESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + + +G FTL+ M
Sbjct: 295 KQLSERVERAMQETQEEDEDWDPEDMLKGEFTLKDM 330
>gi|448531082|ref|ZP_21620916.1| signal recognition particle protein Srp54 [Halorubrum hochstenium
ATCC 700873]
gi|445707522|gb|ELZ59376.1| signal recognition particle protein Srp54 [Halorubrum hochstenium
ATCC 700873]
Length = 464
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 198/336 (58%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ T + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKTRLSESDVEEMVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEEMVDLV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A +QA+ F+ S+
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKEQARQFEASI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + +G FTL+ M
Sbjct: 295 KQLSERVERAMQETQEEDDDWDPEDMLKGEFTLKDM 330
>gi|219851208|ref|YP_002465640.1| signal recognition particle protein Srp54 [Methanosphaerula
palustris E1-9c]
gi|219545467|gb|ACL15917.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanosphaerula palustris E1-9c]
Length = 440
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 204/336 (60%), Gaps = 14/336 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG S+ A+++++ T++D + E + ++ RAL+Q+DV KLV + IK
Sbjct: 1 MLDRLGSSLKDALKKLAGKTVVDRAAVEELVKDLQRALIQSDVNVKLVMNLSQAIKTRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + + ++ EL ++ P G+ +++M GLQGSGKTTT K
Sbjct: 61 EEEPLKGMGVREHVLRIVYQELVGLMGP---EVEVTLGQQTILM-AGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + A++C DTFR GA+ Q+ K +P +G E+D V+I +G+++ +
Sbjct: 117 ARYFQRKGLRVAVICGDTFRPGAYQQISTLCQKINVPCFGDPNETDAVKIVTKGLKSVGQ 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEE---MRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQ 238
+++I+DT GRH E L +E + +S+AT+ LVI D+++GQ A +QA+ F Q
Sbjct: 177 --AEVLIIDTQGRHALEEGLIQEIVDLNTLSKATHRWLVI---DAALGQQASEQARRFHQ 231
Query: 239 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 298
++ + VI+TKMDG AKGGGALSAVA TKS ++FIG+GE +++ E FD F+SRLLGMG
Sbjct: 232 AIDIDGVIITKMDGTAKGGGALSAVAETKSGIVFIGSGETIEDLERFDPDGFISRLLGMG 291
Query: 299 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
D +++ E + + + + G FTLR M+
Sbjct: 292 DLKALVERAEEAITTEDVD--VNSMLRGKFTLRDMY 325
>gi|284163555|ref|YP_003401834.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Haloterrigena turkmenica DSM 5511]
gi|284013210|gb|ADB59161.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Haloterrigena turkmenica DSM 5511]
Length = 463
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 203/336 (60%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA +G+E K
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTQRAEVDFYGNPDNDDPVEIARKGLE--K 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ ++ + +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEEIEDVADPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E M+++ + + +G+FTL M
Sbjct: 295 GQLAERVERAMEQTEMEEEDWDPEDMLQGSFTLHDM 330
>gi|448732200|ref|ZP_21714482.1| signal recognition particle protein Srp54 [Halococcus salifodinae
DSM 8989]
gi|445805112|gb|EMA55339.1| signal recognition particle protein Srp54 [Halococcus salifodinae
DSM 8989]
Length = 464
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 204/339 (60%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ +I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDSIEQRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ +++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVELV--GESTDLPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ A +A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMAERAEVTFYGDPDADDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E D+ IVDT+GRH E L +E++++ PD + VMD+++GQ A DQAQ F++++
Sbjct: 175 TEEADIHIVDTAGRHALEEGLIDEIQEIDAVVEPDRSLLVMDAALGQGAKDQAQRFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIM 333
+++ + D PE + +G FTL+ M
Sbjct: 295 KQLAERVERAMADTDTDEEDWDPE---DILDGQFTLKDM 330
>gi|257052337|ref|YP_003130170.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorhabdus utahensis DSM 12940]
gi|256691100|gb|ACV11437.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorhabdus utahensis DSM 12940]
Length = 469
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 201/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+ + + I E+ + + EI R+LLQADV LV ++ +I+
Sbjct: 1 MVLDDLGSSLRGALDGLRGKSRISEEDVQAVVKEIQRSLLQADVDVDLVMDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTSARDWVLRIVYEELVDLV--GESTELPLE--PQTIVLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT+R GA++Q ++ A +A++ FYG E D V+IA +G+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTWRPGAYEQAEEMAERAEVDFYGDPDEDDAVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
++ D+ IVDT+GRH E L +E+ + +PD + V+D++IGQ A +QA F+ +V
Sbjct: 175 TDDADVQIVDTAGRHALEDGLIDELEDIESVADPDHNLLVLDAAIGQEAKEQASRFEDAV 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALVAVNETDSTIAFLGTGETVKDVERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIM 333
+++ + Q E + + +G FTL+ M
Sbjct: 295 QQLTERVERAMEETQAEEGDWGPEDMLDGEFTLKDM 330
>gi|448407315|ref|ZP_21573703.1| signal recognition particle protein Srp54 [Halosimplex carlsbadense
2-9-1]
gi|445675651|gb|ELZ28180.1| signal recognition particle protein Srp54 [Halosimplex carlsbadense
2-9-1]
Length = 468
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 196/336 (58%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ + E + +I R+LLQADV LV E+ IK
Sbjct: 1 MVLDDLGTSLRSTLDDLRGQSRISEEDVEEVVKDIQRSLLQADVDVDLVMELSNAIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + + + +++EL ++ G + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTSAHDWVLRVVYDELVGLV--GDSTDLPLESQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT R GA+DQ K+ A +A++ FYG DPVRIA EG+E
Sbjct: 117 MAWWFSKKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDADDPVRIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GR L +++ + PD + V+D+++GQ+A DQAQ F+ S+
Sbjct: 175 TEDADIRIVDTAGRDGLNEELIDQIEDIEAEVQPDRDLLVLDAAMGQSAKDQAQEFEDSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETGSSIAFLGTGETVSDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E ++ + + EG FTL M
Sbjct: 295 KQLTERVERAMEETGEEEDDWDPEDMMEGTFTLHDM 330
>gi|156937833|ref|YP_001435629.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ignicoccus
hospitalis KIN4/I]
gi|156566817|gb|ABU82222.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ignicoccus
hospitalis KIN4/I]
Length = 442
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 210/327 (64%), Gaps = 4/327 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
+ A+++ ++ E +N + E+ + L+++DV KLV ++ I++ + G
Sbjct: 5 VREAVKKFLRSSADYETSVNLFIKELQKTLIKSDVNVKLVLQLTKRIRERALKERPPPGA 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
++R + ++ EL + K P P K P VIM VG+QGSGKTTT K A +++ +
Sbjct: 65 SRRDWFVKIVYEELANLFGGDKEPELKPPK-VPWVIMMVGVQGSGKTTTAGKLARFYKVR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G++ ALV ADT+R GA DQL+Q A +AK+ FY + D V IA GVE K + ++II
Sbjct: 124 GYRVALVAADTYRPGAKDQLRQLAERAKVLFY-TEPGDDAVGIAKRGVEWAKSQGAEIII 182
Query: 189 VDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 248
VDT+GRHK EA L +EM+++SEA PD V+ V+D+SIGQ A A+AF ++ +G+++VT
Sbjct: 183 VDTAGRHKNEAELLKEMKEMSEAIKPDEVMLVIDASIGQQAKALAEAFHKTTPIGSIVVT 242
Query: 249 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 308
K+DG AKGGGALSAVA T + + F+GTGE ++E E F K FV+R+LG+GD G ++++
Sbjct: 243 KLDGTAKGGGALSAVAVTGATIKFVGTGEKLEELEPFKPKKFVARILGLGDLEGLLERLK 302
Query: 309 EVVPMDQQPELLQK-LSEGNFTLRIMF 334
+ D+ E+ QK L +G+ TL+ ++
Sbjct: 303 GLEEADKLEEISQKVLEKGDITLKDLY 329
>gi|431907352|gb|ELK11325.1| Signal recognition particle 54 kDa protein [Pteropus alecto]
Length = 438
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 138/173 (79%), Gaps = 1/173 (0%)
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
+YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VM
Sbjct: 57 NYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVM 116
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+
Sbjct: 117 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 176
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 177 FEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 228
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV 56
>gi|257387282|ref|YP_003177055.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Halomicrobium mukohataei DSM 12286]
gi|257169589|gb|ACV47348.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halomicrobium mukohataei DSM 12286]
Length = 468
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 198/339 (58%), Gaps = 15/339 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ + + + EI R+LLQADV LV+++ IK
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEEDIEDIVKEIQRSLLQADVDVGLVQDLSDGIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTEIPLENQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT R GA+DQ KQ A A++ FYG +DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTDRPGAYDQSKQMADNAEVEFYGDEDSNDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GR L +++ ++ PD + V+D+++GQ+A DQAQ F+ ++
Sbjct: 175 TEDADVRIVDTAGRDGLNEELIDQIERIGAEVQPDRNLLVIDAAMGQSAKDQAQEFEDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGALAAVDQTDSTIAFLGTGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIM 333
+++ + D +PE + EG+FTL+ M
Sbjct: 295 KQLTERVERAMEETGEEEGDWEPE---DMMEGSFTLKDM 330
>gi|395504261|ref|XP_003756474.1| PREDICTED: signal recognition particle 54 kDa protein, partial
[Sarcophilus harrisii]
Length = 418
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/172 (65%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Query: 163 YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMD 222
YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VMD
Sbjct: 1 YTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMD 60
Query: 223 SSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEF 282
+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+F
Sbjct: 61 ASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDF 120
Query: 283 EVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
E F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 121 EPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 171
>gi|444722487|gb|ELW63179.1| Signal recognition particle 54 kDa protein [Tupaia chinensis]
Length = 594
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 138/173 (79%), Gaps = 1/173 (0%)
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
+YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VM
Sbjct: 57 NYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVM 116
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+
Sbjct: 117 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 176
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR M+
Sbjct: 177 FEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMY 228
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV 56
>gi|448388336|ref|ZP_21565191.1| signal recognition particle protein Srp54 [Haloterrigena salina JCM
13891]
gi|445670472|gb|ELZ23072.1| signal recognition particle protein Srp54 [Haloterrigena salina JCM
13891]
Length = 464
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 202/336 (60%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTQRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+ IVDT+GRH E L +E+ ++ + +PD + V+D++IGQ A DQAQ F +S+
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEEIEDVADPDTSLLVLDAAIGQGAKDQAQQFDESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGDL 294
Query: 301 SGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E M++ + + +G+FTL M
Sbjct: 295 GQLAERVERAMEQTEMEEDDWDPEDMLQGSFTLHDM 330
>gi|255546093|ref|XP_002514106.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
gi|223546562|gb|EEF48060.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
Length = 206
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/263 (50%), Positives = 161/263 (61%), Gaps = 58/263 (22%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M LA+LGGS+SRAIQQM+NA+IID CLNEI +L Q+DVQF LVR+MQ NIKK +
Sbjct: 1 MALAELGGSMSRAIQQMNNASIIDL-----CLNEIALSLFQSDVQFNLVRKMQVNIKKFI 55
Query: 61 -NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
N AAG++K IIQ AIFNELCK+LDPG+PSF K K
Sbjct: 56 HNNHYFAAGYDKPYIIQHAIFNELCKLLDPGEPSFARKIKK------------------- 96
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KKGW+PA+V AD FRA FDQL +NA +A IP YGS+ ES PV+ V+
Sbjct: 97 -------KKGWRPAIVYADAFRASNFDQLMKNAIEATIPRYGSFMESHPVK----AVQKC 145
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K N DLII+DT+ RH + A+L +EMRQVSE T AFKQS
Sbjct: 146 IKRNSDLIIIDTTERHTEVASLLKEMRQVSETT----------------------AFKQS 183
Query: 240 VSVGAVIVTKMDGHAKGGGALSA 262
V VG VIVTKM+G+A+ G ALSA
Sbjct: 184 VEVGVVIVTKMNGNAEAGVALSA 206
>gi|448503443|ref|ZP_21613074.1| signal recognition particle protein Srp54 [Halorubrum coriense DSM
10284]
gi|445692311|gb|ELZ44489.1| signal recognition particle protein Srp54 [Halorubrum coriense DSM
10284]
Length = 463
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 200/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTRLPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVVQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ +PD + V+D++IGQ A +QA+ F++S+
Sbjct: 175 TADADVHIVDTAGRHALEDDLIAEIEEIEGVVDPDRSLLVLDAAIGQGAKEQARQFEESI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + + +G+FTL M
Sbjct: 295 KQLSERVERAMQETQEEDEDWDPEDMLQGDFTLNDM 330
>gi|448472202|ref|ZP_21601078.1| signal recognition particle protein Srp54 [Halorubrum aidingense
JCM 13560]
gi|445819992|gb|EMA69822.1| signal recognition particle protein Srp54 [Halorubrum aidingense
JCM 13560]
Length = 464
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 199/336 (59%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVALV--GDSTDLPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA +G++
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDNDDPVDIARKGLDATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ A +PD + V+D++IGQ A +QA+ F+QS+
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEIEEIERAVDPDRSLLVLDAAIGQGAKEQARQFEQSI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 235 GIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + + +G FTL+ M
Sbjct: 295 KQLSERVERAMQEAQDEDEDWDPEDMLKGEFTLKDM 330
>gi|20095048|ref|NP_614895.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
gi|23822175|sp|Q8TUY9.1|SRP54_METKA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|19888324|gb|AAM02825.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
Length = 447
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/323 (39%), Positives = 202/323 (62%), Gaps = 7/323 (2%)
Query: 15 QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRI 74
+++ A+IIDE + E + ++ RALL+ADV KLV E+ I+K ++ AG KR
Sbjct: 13 KKIKGASIIDEDFVKEVVRDVQRALLEADVDVKLVLELSKRIEKRALEEEPPAGVPKRDY 72
Query: 75 IQQAIFNELCKMLDPGKPSF--TPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
+ + ++ EL ++L K +VIM VGL G GKTTT K A Y Q+KG++
Sbjct: 73 LLRIVYEELVELLGGEKTEGLDIDLSRDVNVIMLVGLYGMGKTTTAAKLARYLQRKGYRV 132
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
LV AD +R A +QL+Q A + +P + + D V +AV+GVE K E CD++IVDT+
Sbjct: 133 GLVGADPYRPAAGEQLRQLAEEVDVPVHVEDVD-DAVEMAVKGVEALKDE-CDVVIVDTA 190
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GR + L +E+R+++E P V+ V+D+++GQ A D A+AF ++V + V++TK+D
Sbjct: 191 GRDRLSEDLIDELREMAERIEPHEVLLVLDATVGQKAGDHAEAFHEAVQLTGVVITKLDT 250
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
AKGGGALSAVA T +P+ F+GTGE +D+ E F+ + FV+RLLG+GD + + E++
Sbjct: 251 AAKGGGALSAVARTGAPIKFVGTGERVDDLEEFNPRSFVARLLGIGDIDELLRRTEEMLE 310
Query: 313 MDQQPELLQKLSEGNFTLRIMFS 335
+++ + + EG FTL+ ++
Sbjct: 311 EEEK---AEDVLEGEFTLKDLYE 330
>gi|448668329|ref|ZP_21686460.1| signal recognition particle protein Srp54 [Haloarcula amylolytica
JCM 13557]
gi|445768411|gb|EMA19496.1| signal recognition particle protein Srp54 [Haloarcula amylolytica
JCM 13557]
Length = 469
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 202/337 (59%), Gaps = 10/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ ++I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIADIVKEIQRSLLQADVDVGLVQDLSSSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F++++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E D++ + + EG FTL+ M
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDM 331
>gi|305663445|ref|YP_003859733.1| GTP-binding signal recognition particle SRP54 G- domain
[Ignisphaera aggregans DSM 17230]
gi|304378014|gb|ADM27853.1| GTP-binding signal recognition particle SRP54 G- domain
[Ignisphaera aggregans DSM 17230]
Length = 453
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 192/303 (63%), Gaps = 5/303 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPG- 90
+ E+ + LL+ADV KLV E+ NI++ + +K+ + +++EL +
Sbjct: 29 VKELQKTLLRADVNVKLVLELTKNIRERALKERPPPYISKQEWFIKIVYDELSSLFGGDI 88
Query: 91 KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQ 150
KP P K P +IM VG+QGSGKTTT K AY++++ G++P L+C DT+R A++QL Q
Sbjct: 89 KPQVFPVK-TPYIIMLVGVQGSGKTTTAAKIAYFYKRYGYRPCLICTDTYRPAAYEQLYQ 147
Query: 151 NATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAALFEEMRQV 208
+ + +PF G SDP+ IA + + N ++II+DT+GRH +E L +EM+ +
Sbjct: 148 LSKQIDVPFCGDPKSSDPIDIAKKCLSYCINNNTNIIIIDTAGRHGYGEEEYLLKEMQDI 207
Query: 209 SEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKS 268
++A NPD V+ ++D+SIGQ A+D A F + +G++++TK+DG AKGGGALSAVAATK+
Sbjct: 208 AKAVNPDEVMLIIDASIGQKAYDLALRFHSATPIGSIVITKLDGTAKGGGALSAVAATKA 267
Query: 269 PVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQQPELLQKLSEGN 327
+ FIGTGE + E EVFD + FV R+LG+GD +DK+ + D + L + ++ G
Sbjct: 268 IIKFIGTGEKIPELEVFDPRRFVGRILGLGDLPTLIDKLKSIERSSDLEKRLTKAIATGK 327
Query: 328 FTL 330
+L
Sbjct: 328 ISL 330
>gi|119586297|gb|EAW65893.1| hCG2033479, isoform CRA_c [Homo sapiens]
Length = 177
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 135/161 (83%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYG
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYG 161
>gi|448634293|ref|ZP_21674691.1| signal recognition particle protein Srp54 [Haloarcula vallismortis
ATCC 29715]
gi|445749266|gb|EMA00711.1| signal recognition particle protein Srp54 [Haloarcula vallismortis
ATCC 29715]
Length = 469
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 200/340 (58%), Gaps = 16/340 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F+ ++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEDAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQQ-------PELLQKLSEGNFTLRIM 333
+++ + Q+ PE + EG FTL+ M
Sbjct: 295 KQLTERVERAMEETQEGDDEDWDPE---DMLEGQFTLKDM 331
>gi|55379689|ref|YP_137539.1| signal recognition 54 kDa protein [Haloarcula marismortui ATCC
43049]
gi|448641490|ref|ZP_21678100.1| signal recognition particle protein Srp54 [Haloarcula sinaiiensis
ATCC 33800]
gi|448654753|ref|ZP_21681679.1| signal recognition particle protein Srp54 [Haloarcula californiae
ATCC 33799]
gi|74552458|sp|Q5UY20.1|SRP54_HALMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|55232414|gb|AAV47833.1| signal recognition 54 kDa protein [Haloarcula marismortui ATCC
43049]
gi|445760904|gb|EMA12160.1| signal recognition particle protein Srp54 [Haloarcula sinaiiensis
ATCC 33800]
gi|445766601|gb|EMA17728.1| signal recognition particle protein Srp54 [Haloarcula californiae
ATCC 33799]
Length = 469
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 200/337 (59%), Gaps = 10/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSNSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F+ ++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E D++ + + EG FTL+ M
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDM 331
>gi|448689701|ref|ZP_21695285.1| signal recognition particle protein Srp54 [Haloarcula japonica DSM
6131]
gi|445777972|gb|EMA28932.1| signal recognition particle protein Srp54 [Haloarcula japonica DSM
6131]
Length = 470
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 200/337 (59%), Gaps = 10/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
EN D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F+ ++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E D++ + + EG FTL+ M
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDM 331
>gi|119586299|gb|EAW65895.1| hCG2033479, isoform CRA_e [Homo sapiens]
Length = 341
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 135/161 (83%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYG
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYG 161
>gi|119586298|gb|EAW65894.1| hCG2033479, isoform CRA_d [Homo sapiens]
Length = 337
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 135/161 (83%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYG
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYG 161
>gi|448679313|ref|ZP_21690150.1| signal recognition particle protein Srp54 [Haloarcula argentinensis
DSM 12282]
gi|445771411|gb|EMA22468.1| signal recognition particle protein Srp54 [Haloarcula argentinensis
DSM 12282]
Length = 469
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 201/337 (59%), Gaps = 10/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
E+ D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F++++
Sbjct: 175 TESADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEEAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E D++ + + EG FTL+ M
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMMEGKFTLKDM 331
>gi|344210686|ref|YP_004795006.1| signal recognition 54 kDa protein [Haloarcula hispanica ATCC 33960]
gi|343782041|gb|AEM56018.1| signal recognition 54 kDa protein [Haloarcula hispanica ATCC 33960]
Length = 470
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 199/337 (59%), Gaps = 10/337 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
N D+ IVDT+GR L E++ ++ + PD + V+D+++GQ+A QA F+ ++
Sbjct: 177 --NADVRIVDTAGRDGLNEELIEQIERIEQEVQPDRDLLVLDAAMGQSAKSQAADFEAAI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGDL 294
Query: 301 SGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIM 333
+++ E D++ + + EG FTL+ M
Sbjct: 295 KQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDM 331
>gi|325968148|ref|YP_004244340.1| GTP-binding signal recognition particle SRP54 G- domain
[Vulcanisaeta moutnovskia 768-28]
gi|323707351|gb|ADY00838.1| GTP-binding signal recognition particle SRP54 G- domain
[Vulcanisaeta moutnovskia 768-28]
Length = 446
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 184/318 (57%), Gaps = 5/318 (1%)
Query: 14 IQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRR 73
+ ++ IDE L E L EI R LL+ADV +V + I++ + G +
Sbjct: 14 VNRIRGLNYIDEATLKEILREIQRILLRADVSADVVSSITKTIEERFRQEKPPQGITSKE 73
Query: 74 IIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
+ ++ EL K L + PS K +P +M +G++GSGKTTT K A ++ K+ K
Sbjct: 74 FLLYLLYQELVKALGGEEVPSVNISK-RPYKLMLIGIEGSGKTTTAAKLARFYIKRNLKV 132
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
L+ DT+R GA+ QLKQ A K FYG DP+ I G+E ++ DLII+DT+
Sbjct: 133 GLIETDTYRPGAYYQLKQLAEKVNALFYGEEDSKDPIAILRHGLEYMQRNKVDLIIIDTA 192
Query: 193 GRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDG 252
GRH+ E L +E + + + PD V+ V+D++IG+ A Q +AF + V + +V +TKMD
Sbjct: 193 GRHRNEEELLKEAKAIYDEAKPDEVMLVIDATIGRQAAAQTEAFMKYVPIHSVFLTKMDS 252
Query: 253 HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVP 312
AK GGAL++V + + + FIG GE +DE E+FD FVSRLLGMGD ++K+ +
Sbjct: 253 TAKAGGALTSVIRSGARIKFIGIGEDIDEVEIFDANKFVSRLLGMGDLEALIEKVRAI-- 310
Query: 313 MDQQPELLQKLSEGNFTL 330
+++ ++++++ EG L
Sbjct: 311 -EEEDKIMEEIEEGKINL 327
>gi|14719790|pdb|1J8M|F Chain F, Signal Recognition Particle Conserved Gtpase Domain From
A. Ambivalens
Length = 297
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 174/273 (63%), Gaps = 4/273 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
+K + + + E+ ++L+ ADV KLV + IK+ + + +R + +++EL
Sbjct: 22 DKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNEKPPTYIERREWFIKIVYDELS 81
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
+ K P P K P VIM VG+QG+GKTTT K AY+++KKG+K LV AD +R
Sbjct: 82 NLFGGDKEPKVIPDK-IPYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYRPA 140
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAAL 201
A +QL+Q + +P YG E D V IA GVE F E ++IIVDT+GRH +EAAL
Sbjct: 141 ALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAAL 200
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + EA PD V V+D+SIGQ A+D A F Q+ +G +I+TKMDG AKGGGALS
Sbjct: 201 LEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALS 260
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AVAAT + + FIGTGE +DE EVF+ + FV+RL
Sbjct: 261 AVAATGATIKFIGTGEKIDELEVFNPRRFVARL 293
>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
Length = 448
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 194/325 (59%), Gaps = 1/325 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L + AI+++ ID++ LN+ L EI ALL+ADV +K+V + +IK+ ++
Sbjct: 5 LAERVQSAIEKIGRKGRIDQETLNKGLREIKLALLEADVNYKVVSKFINDIKEKALGAEV 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G N + + + +++EL + L G+ + K KP+VI+ +GLQGSGKTTT K A Y
Sbjct: 65 VKGVNPAQQLVKIVYDELVEALG-GEGAKLELKSKPAVILLIGLQGSGKTTTAAKLANYL 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G K L AD +R A QLK+ K +P + E D V+IA + ++ K+EN D
Sbjct: 124 KKQGKKVLLTSADVYRPAAMLQLKKLGDKIGVPVFLEEDEKDAVKIAKDALKKAKEENYD 183
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
++I+DT+GR + L EE +++ E TNPD V+FV+D+ GQ + + A+AF ++V + +
Sbjct: 184 VLIIDTAGRLHIDEELLEEAKRIKEETNPDEVLFVIDAMTGQESVNIAKAFNEAVGMTGI 243
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
++TKMD A+GG ALS T P+ F G GE +++F+ F SR+LGMGD ++
Sbjct: 244 VLTKMDSDARGGVALSVKGVTGKPIKFAGVGEKIEDFQPFYPDRVASRILGMGDIVSLVE 303
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTL 330
K EV+ + + +KL G FTL
Sbjct: 304 KAQEVIDEKEALSMQEKLLSGEFTL 328
>gi|327310166|ref|YP_004337063.1| GTP-binding signal recognition particle SRP54 [Thermoproteus
uzoniensis 768-20]
gi|326946645|gb|AEA11751.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermoproteus uzoniensis 768-20]
Length = 437
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 181/301 (60%), Gaps = 4/301 (1%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ ++++ IDE+ L E E+ R+LL+ADV +VR + + + G
Sbjct: 9 SKLVEKIRGVEYIDEQTLQEISRELQRSLLKADVPLDMVRAFTDTAVRRIREERPPPGIP 68
Query: 71 KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
+ + I+ EL K+L +P K +P VIM +G++GSGKTTT K A ++ K+G
Sbjct: 69 VKDFVIYVIYQELVKLLGGEAEPDLKLPK-RPYVIMLLGVEGSGKTTTAAKIALFYIKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
K +V DT R A+DQLKQ A + FYG +D V IA G+E K DL++V
Sbjct: 128 LKVGVVETDTIRPAAYDQLKQLAERVGARFYGERDGNDAVGIARRGLEQMK--GVDLVLV 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
DT+GRHK E +L EE++ + +A PD V+ V+D+++G+ A QA+AF + V + +V +TK
Sbjct: 186 DTAGRHKNEQSLLEEVKAIYDAIKPDEVMLVVDATVGRQAAAQAEAFMKYVPIHSVAITK 245
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD A+GGGAL+AVA T + V FIG GE +DE E F + FV+R+LGMGD ++++
Sbjct: 246 MDSTARGGGALAAVAKTGARVKFIGVGEGVDEIEPFSPRKFVARVLGMGDLETLVERVKA 305
Query: 310 V 310
V
Sbjct: 306 V 306
>gi|307596389|ref|YP_003902706.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Vulcanisaeta distributa DSM 14429]
gi|307551590|gb|ADN51655.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Vulcanisaeta distributa DSM 14429]
Length = 446
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 182/317 (57%), Gaps = 3/317 (0%)
Query: 14 IQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRR 73
+ ++ + IDE L E L EI R LL+ADV +V + I++ + G +
Sbjct: 14 VNRIRGLSYIDEATLKEVLREIQRILLRADVSADVVLSITKTIEERFRQEKPPQGITSKE 73
Query: 74 IIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPA 133
+ ++ EL K L + +P +M +G++GSGKTT+ K A ++ K+ +
Sbjct: 74 FLLYLLYQELVKALGGEEAPNVNVSKRPYKLMLIGVEGSGKTTSAAKLARFYIKRNLRVG 133
Query: 134 LVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSG 193
L+ DT+R GA+ QLKQ A + FYG DP+ I G+E ++ DLII+DT+G
Sbjct: 134 LIETDTYRPGAYHQLKQLAERVNALFYGEENSKDPIAILRHGLEYMQRNRVDLIIIDTAG 193
Query: 194 RHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGH 253
RH+ E L +E + + + PD V+ V+D+++G+ A Q +AF + V + +V +TKMD
Sbjct: 194 RHRNEEELLKEAKAIYDEAKPDEVMLVIDATVGRQAAAQTEAFMKYVPIHSVFLTKMDST 253
Query: 254 AKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPM 313
AK GGAL++V + + + FIG GE +DE EVFD +VSRLLGMGD ++KI +
Sbjct: 254 AKAGGALTSVIRSGARIKFIGVGEDIDEIEVFDANKYVSRLLGMGDLEALIEKIRAI--- 310
Query: 314 DQQPELLQKLSEGNFTL 330
+++ ++++++ EG L
Sbjct: 311 EEESKIMEEIEEGKINL 327
>gi|14719791|pdb|1J8Y|F Chain F, Signal Recognition Particle Conserved Gtpase Domain From
A. Ambivalens T112a Mutant
Length = 297
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/273 (45%), Positives = 173/273 (63%), Gaps = 4/273 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
+K + + + E+ ++L+ ADV KLV + IK+ + + +R + +++EL
Sbjct: 22 DKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNEKPPTYIERREWFIKIVYDELS 81
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
+ K P P K P VIM VG+QG+GK TT K AY+++KKG+K LV AD +R
Sbjct: 82 NLFGGDKEPKVIPDK-IPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPA 140
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A +QL+Q + +P YG E D V IA GVE F E ++IIVDT+GRH +EAAL
Sbjct: 141 ALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAAL 200
Query: 202 FEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 261
EEM+ + EA PD V V+D+SIGQ A+D A F Q+ +G +I+TKMDG AKGGGALS
Sbjct: 201 LEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALS 260
Query: 262 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AVAAT + + FIGTGE +DE EVF+ + FV+RL
Sbjct: 261 AVAATGATIKFIGTGEKIDELEVFNPRRFVARL 293
>gi|159040882|ref|YP_001540134.1| GTP-binding signal recognition particle [Caldivirga maquilingensis
IC-167]
gi|157919717|gb|ABW01144.1| GTP-binding signal recognition particle SRP54 G- domain [Caldivirga
maquilingensis IC-167]
Length = 449
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 180/301 (59%), Gaps = 1/301 (0%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK-IVNLDDLAA 67
+I I ++ +T+IDE+ L L ++ RAL++ADV KLV E+ +I++ +L
Sbjct: 7 AIGSIISRIRGSTLIDEETLRSILRDLQRALIRADVDVKLVYELTKSIEEEFKEAKELPP 66
Query: 68 GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
G + + ++ +L +L K K KP ++M VG +GSGKTTT K A ++ K
Sbjct: 67 GLTAKDYLVYLLYRKLTDLLGGDKEPDVEVKTKPYILMLVGTEGSGKTTTAGKLANFYIK 126
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G K L+ DT R GAFDQL+Q A + K F+G + + V IA G+ DLI
Sbjct: 127 RGLKVGLIETDTIRPGAFDQLRQLAERVKAMFFGDPSLGNAVNIAKAGLSRMISSKADLI 186
Query: 188 IVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 247
I+DT+GRH+ E L E++++ EA P+ V+ V+D++ G+ QA+AF + V V ++ +
Sbjct: 187 IIDTAGRHRNEEELLSEVKEIYEAVKPNEVMLVVDATNGKQVGAQAEAFSKYVPVNSIFI 246
Query: 248 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 307
TK+D AKGGGAL + T + + FIG GE +++ EVF+ + FV+RL+GMGD +DK+
Sbjct: 247 TKLDSTAKGGGALVSAVKTGARIKFIGNGEDIEDIEVFNPRRFVARLMGMGDVESLLDKV 306
Query: 308 H 308
Sbjct: 307 K 307
>gi|119570967|gb|EAW50582.1| hCG2039249 [Homo sapiens]
Length = 168
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 132/165 (80%), Gaps = 1/165 (0%)
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
SYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A PD +++VM
Sbjct: 5 SYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVM 64
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+
Sbjct: 65 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 124
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 326
FE F +PF+S+LLGMGD G +DK++E + +D L++KL G
Sbjct: 125 FEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHG 168
>gi|289548587|ref|YP_003473575.1| signal recognition particle protein [Thermocrinis albus DSM 14484]
gi|289182204|gb|ADC89448.1| signal recognition particle protein [Thermocrinis albus DSM 14484]
Length = 437
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 189/333 (56%), Gaps = 5/333 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+A++++ N + EK LN+ L +I ALL+ADV + +V+ I++
Sbjct: 1 MLELLTDRFSKALERLRNTRKLTEKQLNDILRDIRMALLEADVDYDVVKTFLKRIRERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+DL + + ++ EL K+L K KKG ++FVGLQG+GKTTT K
Sbjct: 61 TEDLKNNLSPAESVLLTVYEELVKILGETKEDL--KKG---TVLFVGLQGTGKTTTVGKL 115
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY + KG+K AL D R A QL++ A + ++P+Y + E DPV+IA V+ K
Sbjct: 116 AYYLKGKGFKVALTSTDVRRPAAILQLQRLAERVEVPYYSAEGEEDPVKIAQIAVKRAKD 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
E D +++DT+GR + L EE+R++ E NP +++V D+ GQ A A+ F ++V
Sbjct: 176 EGVDYLLLDTAGRLHIDEELMEELRRIKETVNPSEILYVADAMQGQEALRAAKTFHETVG 235
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
+ V++TKMDG A+GG ALS A P+ F+G GE +++ E F R+LG+GD
Sbjct: 236 LTGVVLTKMDGDARGGVALSVREALGVPIKFMGVGEKLEDIEPFYPDRVAQRILGLGDIQ 295
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
+++ +V+P D+ L ++ +G F L M
Sbjct: 296 SLVERAQQVIPEDEAQALAVRIMKGEFDLEDML 328
>gi|241628780|ref|XP_002410011.1| signal recognition particle 54 kD protein, putative [Ixodes
scapularis]
gi|215503285|gb|EEC12779.1| signal recognition particle 54 kD protein, putative [Ixodes
scapularis]
Length = 196
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/161 (62%), Positives = 132/161 (81%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ +
Sbjct: 35 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSAI 94
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++ AG NKRR+IQ A+F EL K++DPG ++ P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 95 DIDEMGAGLNKRRMIQSAVFKELIKLVDPGVKAWQPTKGKNNIIMFVGLQGSGKTTTCTK 154
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYG
Sbjct: 155 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYG 195
>gi|15791232|ref|NP_281056.1| signal recognition particle [Halobacterium sp. NRC-1]
gi|169236988|ref|YP_001690188.1| signal recognition particle 54K protein [Halobacterium salinarum
R1]
gi|12230636|sp|Q9HMN5.1|SRP54_HALSA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|229558602|sp|B0R7X3.1|SRP54_HALS3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|10581860|gb|AAG20536.1| signal recognition particle [Halobacterium sp. NRC-1]
gi|167728054|emb|CAP14842.1| signal recognition particle 54K protein [Halobacterium salinarum
R1]
Length = 460
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 192/336 (57%), Gaps = 9/336 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ +++ + EI R+LLQADV LV ++ +I +
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRISEEDVDKVVKEIQRSLLQADVDVDLVMDLSESITERS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ TP + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLRIVYEELVGLV----GDSTPIPLEEQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA++Q + A +A++ FYG DPV+IA +G+
Sbjct: 117 MAWWFSKKGLRPAIVQTDTFRPGAYEQAAEMADRAEVDFYGEPDSDDPVQIARDGLAATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D+ IVDT+GRH E L E+ ++ PD + V+D++IGQ A QA+ F S+
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEIEEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDASI 234
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V +TK+DG AKGGG+L+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 235 GIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRLLGMGDL 294
Query: 301 SGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIM 333
+++ + Q + + L +G FTL M
Sbjct: 295 KQLTERVERAMEETQDDDEDWDPEDLMKGEFTLHDM 330
>gi|294055143|ref|YP_003548801.1| signal recognition particle protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614476|gb|ADE54631.1| signal recognition particle protein [Coraliomargarita akajimensis
DSM 45221]
Length = 453
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 189/331 (57%), Gaps = 5/331 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KIV 60
+L L + A++ + + E+ + E L E+ +ALL ADV FK+ RE +N+K + V
Sbjct: 1 MLENLTDKLGSALRNLRGVGKLTEENMEEALKEVRKALLSADVHFKVAREFVSNVKEQCV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ L + +++I+ I +EL K+L G KK P IM VGL GSGKTT+ K
Sbjct: 61 GQEVLKSVTPGQQVIK-IIHDELVKLLGEGTTELEDKK--PLRIMMVGLHGSGKTTSSGK 117
Query: 121 YA-YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A Y +K+ ++PAL+ D +R A DQL+ + FYG E + V I G+E
Sbjct: 118 LANYLAKKRDYRPALIACDVYRPAAIDQLETLSQTVGCEFYGDREEKNVVTIGKRGLEAA 177
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K + +LII DT+GR + + L EE++ + A PD V+ V D+++GQ A + A+ F ++
Sbjct: 178 KAADANLIIFDTAGRLQIDEDLIEEIKDLKAAVQPDEVLLVADAALGQEAVNVAKHFHEA 237
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
V V +I+TK+DG A+GG ALS T +P+ F+G GE +DEF+VF SR+LGMGD
Sbjct: 238 VDVTGIILTKLDGDARGGAALSMKTITDTPIKFMGIGEKVDEFDVFHPDRMASRILGMGD 297
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K E + D+ + +K+ + F L
Sbjct: 298 VVSLVEKAQETIDQDEAERMAEKMRKAEFDL 328
>gi|148704788|gb|EDL36735.1| signal recognition particle 54, isoform CRA_a [Mus musculus]
Length = 325
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 130/161 (80%), Gaps = 1/161 (0%)
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVM 221
+YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VM
Sbjct: 44 AYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVM 103
Query: 222 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 281
D+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+
Sbjct: 104 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 163
Query: 282 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 322
FE F +PF+S+LLGMGD G +DK++E + +D L++K
Sbjct: 164 FEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNKALIEK 203
>gi|167043737|gb|ABZ08429.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine crenarchaeote HF4000_APKG3B16]
Length = 441
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ N++ +DE+++ E ++ R+LLQ+DV KLV E+ NI+
Sbjct: 1 MLDNLKSSLRAAIKKIVNSSGVDEELIKELSKDVQRSLLQSDVNVKLVFEITKNIESRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L F K GK + ++ +G+QGSGKTT +K
Sbjct: 61 NEKPPPGLSRKDHIVKILYDELAKLL-GNDTEFHFKSGKINKVLLLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + K+G++ ++ ADTFR GA QL+ K+ + YG D ++ G++ F+
Sbjct: 120 ARFLSKQGYRVGVIGADTFRPGALVQLRTMCEKSDVEVYGDEKNKDSPQVVKNGLKHFES 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
N D+I++DT+GRHK+E L +EM+Q+++A +PDL + V+D +IGQ QA+AF + V
Sbjct: 180 SNLDIILIDTAGRHKEEKDLLDEMKQINKAASPDLALLVVDGTIGQQCHAQAEAFHKIVP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG +I+TK+D AKGGGAL+A AAT + V++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGIIITKLDSSAKGGGALAASAATGAQVMYIGTGERIDDLETFSPTRFVGRLLGMGDIQ 299
Query: 302 GFMD 305
+D
Sbjct: 300 AVLD 303
>gi|148704789|gb|EDL36736.1| signal recognition particle 54, isoform CRA_b [Mus musculus]
Length = 286
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/160 (66%), Positives = 129/160 (80%), Gaps = 1/160 (0%)
Query: 163 YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMD 222
YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD
Sbjct: 6 YTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMD 65
Query: 223 SSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEF 282
+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+F
Sbjct: 66 ASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDF 125
Query: 283 EVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 322
E F +PF+S+LLGMGD G +DK++E + +D L++K
Sbjct: 126 EPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNKALIEK 164
>gi|315427553|dbj|BAJ49153.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
subterraneum]
Length = 466
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 203/334 (60%), Gaps = 7/334 (2%)
Query: 3 LAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+ +G S+ ++ + D+ + E + I R+LL ADV+ +LV+++ I+
Sbjct: 27 FSSMGRSLKEVFRKFLASPSADKSSVEELVRGIQRSLLMADVRVELVQKISERIRARAFE 86
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ L G +++ + + ++ EL +L GKP+ F+ KP V+M +G+QG+GKTTT K
Sbjct: 87 EKLPPGVSRKDSVAKIVYEELINLLG-GKPAQFSTGGKKPYVVMLLGIQGTGKTTTAAKL 145
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y + G+K +VCADT+R A+ QLK +IP YG ++PV IA +G+E FK+
Sbjct: 146 ANYLKVGGYKVGVVCADTYRPAAYQQLKHLLEPRQIPVYGEPENNNPVEIARKGLEHFKQ 205
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
D++I+DT+GRH+Q+ +L +EM+ + + PD I V+D +IGQ A A AF ++
Sbjct: 206 MGVDVVIIDTAGRHRQQESLMDEMKMLEKELKPDENILVIDGTIGQQAGAHAAAFHKATP 265
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG++I+TK+D +GGGAL+AVA T +P+ F+G GE +++F+ F+ +++ LLGM D
Sbjct: 266 VGSIIITKLDTSGRGGGALAAVAETGAPIKFVGVGESVEDFQPFNPSSYIASLLGMPDIE 325
Query: 302 GFMD--KIHEVVPMDQQPELLQKLSEGNFTLRIM 333
++ K+ E+ ++Q E + K G FTL M
Sbjct: 326 SIVERVKLAELTADEKQFEAILK---GKFTLEDM 356
>gi|302349271|ref|YP_003816909.1| Signal recognition 54 kDa protein [Acidilobus saccharovorans
345-15]
gi|302329683|gb|ADL19878.1| Signal recognition 54 kDa protein [Acidilobus saccharovorans
345-15]
Length = 444
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 173/277 (62%), Gaps = 9/277 (3%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+ E + ++ R L++ADV LV+ + I++ + G ++R + ++ EL K+
Sbjct: 23 VEEFIRDLQRELIRADVNVALVKRLSDAIRQRALEQEPPPGVSRRDWFLKIVYEELVKVF 82
Query: 88 ---DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
+P PS P+K P VI+ VG+QGSGKTTT K A ++ +G++ LV DT+R GA
Sbjct: 83 GGEEP--PSVEPRK-VPWVILLVGVQGSGKTTTAGKLARFYSARGYRVGLVETDTYRPGA 139
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAALF 202
+QL+ A + FYG IA GV+ + +IIVDT+GRH E AL
Sbjct: 140 LEQLRTLAQMSGALFYGE-PAGRAEEIASRGVKELESRGAQVIIVDTAGRHGYGDEQALL 198
Query: 203 EEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 262
+EMR++++A +PD V V+D++IGQ AFD A+ F ++ +G +IVTK+DG AKGGG LSA
Sbjct: 199 DEMRRIADAVSPDEVALVVDAAIGQRAFDLARRFHEATPIGTIIVTKLDGTAKGGGVLSA 258
Query: 263 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
VAAT + V F+GTGE +DE E FD + FVSR++G+GD
Sbjct: 259 VAATGARVKFVGTGEKVDELEPFDPQGFVSRIMGLGD 295
>gi|315425555|dbj|BAJ47216.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
subterraneum]
gi|343484393|dbj|BAJ50047.1| signal recognition particle, subunit SRP54 [Candidatus
Caldiarchaeum subterraneum]
Length = 466
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 203/333 (60%), Gaps = 7/333 (2%)
Query: 4 AQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLD 63
+ +G S+ ++ + D+ + E + I R+LL ADV+ +LV+++ I+ +
Sbjct: 28 SSMGRSLKEVFRKFLASPSADKSSVEELVRGIQRSLLMADVKVELVQKISERIRARAFEE 87
Query: 64 DLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
L G +++ + + ++ EL +L GKP+ F+ KP V+M +G+QG+GKTTT K A
Sbjct: 88 KLPPGVSRKDSVAKIVYEELINLLG-GKPAQFSTGGKKPYVVMLLGIQGTGKTTTAAKLA 146
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
Y + G+K +VCADT+R A+ QLK +IP YG ++PV IA +G+E FK+
Sbjct: 147 NYLKVGGYKVGVVCADTYRPAAYQQLKHLLEPRQIPVYGEPENNNPVEIARKGLEHFKQM 206
Query: 183 NCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSV 242
D++I+DT+GRH+Q+ +L +EM+ + + PD I V+D +IGQ A A AF ++ V
Sbjct: 207 GVDVVIIDTAGRHRQQESLMDEMKMLEKELKPDENILVIDGTIGQQAGAHAAAFHKATPV 266
Query: 243 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSG 302
G++I+TK+D +GGGAL+AVA T +P+ F+G GE +++F+ F+ +++ LLGM D
Sbjct: 267 GSIIITKLDTSGRGGGALAAVAETGAPIKFVGVGESVEDFQPFNPSSYIASLLGMPDIES 326
Query: 303 FMD--KIHEVVPMDQQPELLQKLSEGNFTLRIM 333
++ K+ E+ ++Q E + K G FTL M
Sbjct: 327 IVERVKLAELTADEKQFEAILK---GKFTLEDM 356
>gi|161528039|ref|YP_001581865.1| GTP-binding signal recognition particle [Nitrosopumilus maritimus
SCM1]
gi|160339340|gb|ABX12427.1| GTP-binding signal recognition particle SRP54 G- domain
[Nitrosopumilus maritimus SCM1]
Length = 442
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 207/334 (61%), Gaps = 2/334 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKSSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL +L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKNHIVKILYDELSNLL-GNESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + +G+K +V ADT+R GA QLK K+ + YG + D I G+ FK
Sbjct: 120 AKFLTGQGYKVGVVGADTYRPGALVQLKTMCEKSNVEVYGEESNKDSPSIVKNGLNYFKD 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
++ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QSLDVILIDTAGRHKEEQDLLEEMDRINKVADPDLALLVIDGTIGQQCFNQAEAFHKTIP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDVQ 299
Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
+D + + + + + ++++S G + S
Sbjct: 300 AVLD-LAKRLESENDDDRMKRISSGKMNMEDFLS 332
>gi|15828813|ref|NP_326173.1| signal recognition particle protein [Mycoplasma pulmonis UAB CTIP]
gi|14089756|emb|CAC13515.1| SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG)
[Mycoplasma pulmonis]
Length = 449
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 185/327 (56%), Gaps = 3/327 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG I ++IQ+MS T ++E + E + +I ALL+ADV +V++ ++K+ +L
Sbjct: 5 LGNRIQKSIQKMSKKTTLNEADILEVIKDIKFALLEADVNLLVVKKFIKDVKEKALESEL 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
N + + + + +EL +L GK KP VIMFVGLQG GKTTT K AYY
Sbjct: 65 IGKLNPSQTMIKIVKDELTTLLG-GKAQEIKIVKKPHVIMFVGLQGGGKTTTVAKVAYYL 123
Query: 126 QKKGW--KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
+KK + P LV D +R A DQL+ A + +IP Y + P++ A + ++ KE
Sbjct: 124 RKKKFVENPLLVACDVYRPAAIDQLQTLAKQIQIPVYANDVSVSPIKTARQALDQAYKEK 183
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVG 243
DL+I+DT+GR + L EE+ + + PD +IFV D+ GQ + A+ F + +S+
Sbjct: 184 NDLVIIDTAGRLSIDEKLMEELLLIKKEIKPDEIIFVADAMSGQDIINVAKTFHEKLSLS 243
Query: 244 AVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF 303
+ I+TK+D A+GG ALS P+ FIGTGE + ++F R+LGMGD
Sbjct: 244 SSIITKLDSDARGGAALSIREILNIPIKFIGTGEKISNIDIFHADRMAERILGMGDVLSL 303
Query: 304 MDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K EVV ++ +++ ++ +GNF L
Sbjct: 304 IEKTEEVVDKNKVKKMMNRMIKGNFDL 330
>gi|149051248|gb|EDM03421.1| signal recognition particle 54 [Rattus norvegicus]
Length = 278
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
Query: 167 DPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIG 226
DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QVS A PD +++VMD+SIG
Sbjct: 2 DPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIG 61
Query: 227 QAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 286
QA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F
Sbjct: 62 QACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFK 121
Query: 287 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 323
+PF+S+LLGMGD G +DK++E + +D L++KL
Sbjct: 122 TQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKL 157
>gi|388254754|gb|AFK24870.1| signal recognition particle protein [uncultured archaeon]
Length = 460
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 206/341 (60%), Gaps = 21/341 (6%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++++ A+ I+E++++ ++ RALLQ+DV +LV + N+K+ + G +++
Sbjct: 12 ALKKIVGASDINEELIDSLCKDVQRALLQSDVNVRLVLSITQNLKERALKEQPPKGLSRK 71
Query: 73 RIIQQAIFNELCKML----------DPGKPS--------FTPKKGKPSVIMFVGLQGSGK 114
I ++ EL KML D + F P GK +V++ +G+QGSGK
Sbjct: 72 DHIVTILYGELAKMLGYSGEVIKTIDKAQEEERTLATSFFNP--GKQNVVLMLGIQGSGK 129
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TT K A + K G++ +V ADT+R GA QLK N +K + YG D V IA
Sbjct: 130 TTVTAKLARWLTKHGYRIGVVGADTWRPGALTQLKMNCSKINVEVYGEEENKDAVAIARN 189
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
G+ F K+N D++I+DT+GRHK+E L +EM ++ + PDLV+ V+D++IGQ AF QA+
Sbjct: 190 GLAHFAKQNLDVVIIDTAGRHKEEEGLLQEMSEMHKVVTPDLVLLVIDATIGQTAFKQAE 249
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AF ++ VG +++TK+DG AKGGGAL+A AAT + V+FIGTGE +D+ E F FV RL
Sbjct: 250 AFHKTAPVGGIVLTKLDGTAKGGGALAASAATGAKVMFIGTGERIDDLEQFSPTRFVGRL 309
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
LGMGD ++ + + + + + ++++++G T+ ++
Sbjct: 310 LGMGDIKALLE-MAKGLELQADEDQIKRITKGKMTIEDFYA 349
>gi|325294335|ref|YP_004280849.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064783|gb|ADY72790.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 448
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 183/325 (56%), Gaps = 1/325 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L + AI+++ IDE+ L + L EI ALL+ADV +++V +IK+ +
Sbjct: 5 LAEKVQSAIEKIGRKGRIDEETLEKGLREIKLALLEADVNYRVVSNFIKDIKEKALGAKV 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G N + + + + +EL + L G+ KGKPSVI+ +GLQGSGKTTT K A Y
Sbjct: 65 IKGVNPAQQLVKIVHDELVQTLG-GEAEKLNLKGKPSVILLIGLQGSGKTTTAAKLANYL 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G + L D +R A QLK+ + IP + E D V+IA + + K E+ D
Sbjct: 124 KKQGKRVLLTSVDVYRPAAMLQLKKLGDQIGIPVFLEEKEKDAVKIAKDALLKAKDESYD 183
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+++VDT+GR + L EE R++ E PD +FV+DS GQ + + A+AF + V + +
Sbjct: 184 VLVVDTAGRLHIDEELLEEARKIKEEVVPDETLFVIDSMTGQESVNIAKAFDERVGMTGI 243
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
++TKMD A+GG ALS T P+ F G GE +D+FE F SR+LGMGD ++
Sbjct: 244 VLTKMDSDARGGVALSVKGVTGKPIKFAGVGEKIDDFEPFYPDRVASRILGMGDIVSLVE 303
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTL 330
K EV+ + + +KL G FTL
Sbjct: 304 KAQEVIDEKEALSMQEKLLSGEFTL 328
>gi|407464403|ref|YP_006775285.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
sp. AR2]
gi|407047591|gb|AFS82343.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
sp. AR2]
Length = 441
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKNSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELSKLLG-NESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K +V ADT+R GA QLK K+ + YG D I G++ F
Sbjct: 120 AKFLTRQGYKVGVVGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKNGLKHFAG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QPLDVILIDTAGRHKEEKDLLEEMDRINKVADPDLALLVIDGTIGQQCFNQAEAFHKTIP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDIQ 299
Query: 302 GFMD 305
+D
Sbjct: 300 AVLD 303
>gi|315038606|ref|YP_004032174.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|385817872|ref|YP_005854262.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
gi|312276739|gb|ADQ59379.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|327183810|gb|AEA32257.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
Length = 476
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 182/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + NPD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVANPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAQKVAEKMRENTF 329
>gi|325957087|ref|YP_004292499.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
gi|325333652|gb|ADZ07560.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
Length = 476
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 182/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + NPD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVANPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAQKVAEKMRENTF 329
>gi|423318442|ref|ZP_17296319.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
gi|423321926|ref|ZP_17299797.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405591380|gb|EKB64882.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405595567|gb|EKB68947.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
Length = 476
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 183/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + T+PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVTHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTF 329
>gi|295696070|ref|YP_003589308.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
gi|295411672|gb|ADG06164.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
Length = 445
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 183/325 (56%), Gaps = 1/325 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L G + A ++ + + E ++E + E+ RALL ADV F +VR+ +++ ++
Sbjct: 7 LAGRLQEAFARLKSKGKLSEADVDEAMKEVRRALLAADVNFTVVRDFVARVRERAVGQEV 66
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
+ + + + +EL +L GKPS G+P+V+M VGLQG+GKTTT K A +
Sbjct: 67 MKSLTPAQQVIKIVHDELTALLG-GKPSTLNLSGRPAVVMLVGLQGAGKTTTAGKLAQWV 125
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G +P LV AD +R A QL+ K+P + ++DPV I+ +E +E CD
Sbjct: 126 RKQGRRPLLVAADVYRPAAVRQLQTLGEALKVPVFSVDGDADPVEISKSSLERASQEGCD 185
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 245
+++VDT+GR + AL EE+ ++ A P ++ V+D+ GQ+A + A+AF + +
Sbjct: 186 VVLVDTAGRLHVDDALMEELERMKAAVVPGEILLVVDAMTGQSAVEVAEAFHGRLGLTGA 245
Query: 246 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305
I TK+DG KGG ALS ++ P+ F G GE +D E F SR+LGMGD ++
Sbjct: 246 IFTKLDGDTKGGAALSILSVAGCPIKFAGVGEKLDALEPFYPDRMASRILGMGDVLTLIE 305
Query: 306 KIHEVVPMDQQPELLQKLSEGNFTL 330
K + V ++ +L ++L G F+L
Sbjct: 306 KAQQTVDAEKAKQLERQLRAGEFSL 330
>gi|256843368|ref|ZP_05548856.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256849811|ref|ZP_05555242.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|262046944|ref|ZP_06019904.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|293381186|ref|ZP_06627194.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
gi|256614788|gb|EEU19989.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256713300|gb|EEU28290.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|260572926|gb|EEX29486.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|290922226|gb|EFD99220.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
Length = 476
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 183/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + T+PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVTHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTF 329
>gi|386875341|ref|ZP_10117516.1| signal peptide binding domain protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386806843|gb|EIJ66287.1| signal peptide binding domain protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 441
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 195/304 (64%), Gaps = 1/304 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+S AI+++ ++ IDE+++ E ++ RALLQ+DV +LV ++ ++++
Sbjct: 1 MLDGLKNSLSDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLDITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L + F K G + I+ +G+QGSGKTT +K
Sbjct: 61 NEIPPPGLSRKDHIIKILYDELSKLLG-NESDFNFKPGTQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K ++ ADT+R GA QLK K+ + YG + D I G++ F+
Sbjct: 120 AKFLSRQGYKVGVIGADTYRPGALVQLKTMCEKSNVEVYGEESNKDSPNIVKNGLKHFEG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF ++
Sbjct: 180 QPLDVILIDTAGRHKEEKDLLEEMERINKVADPDLALLVIDGTIGQQCFNQAEAFHNTIP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG +I+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGIIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDIQ 299
Query: 302 GFMD 305
+D
Sbjct: 300 AVLD 303
>gi|336053926|ref|YP_004562213.1| signal recognition particle protein [Lactobacillus kefiranofaciens
ZW3]
gi|333957303|gb|AEG40111.1| Signal recognition particle protein [Lactobacillus kefiranofaciens
ZW3]
Length = 476
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV F++V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFRVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGEEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ K K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDKLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKQVAEPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAQKVAEKMRESTF 329
>gi|408405289|ref|YP_006863272.1| signal recognition 54 kDa protein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365885|gb|AFU59615.1| signal recognition 54 kDa protein [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 459
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 207/341 (60%), Gaps = 21/341 (6%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++++ A+ I+E++++ ++ RALLQ+DV +LV + N+K+ + G +++
Sbjct: 12 ALKKIVGASDINEEIIDSLCKDVQRALLQSDVNVRLVLSITQNLKERALKEQPPKGLSRK 71
Query: 73 RIIQQAIFNELCKML----------DPGKPS--------FTPKKGKPSVIMFVGLQGSGK 114
I ++ EL KML D + F P GK ++++ +G+QGSGK
Sbjct: 72 DHIVTILYGELAKMLGYSGEVIKTIDKAQEDERSLATSFFNP--GKQNIVLMLGIQGSGK 129
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TT K A + K G++ ++ ADT+R GA QLK N +K + YG D V IA
Sbjct: 130 TTVTAKLARWLTKHGYRVGVIGADTWRPGALTQLKMNCSKINVEVYGEEDAKDAVAIARN 189
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQ 234
G++ F+ + D+II+DT+GRHK+E L +EM ++ + PDLV+ V+D++IGQ+AF QA+
Sbjct: 190 GLKHFEDQKLDVIIIDTAGRHKEEEGLLQEMTEMHKVVTPDLVLLVIDATIGQSAFKQAE 249
Query: 235 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 294
AF ++ VG +++TK+DG AKGGGAL+A AAT + V+FIGTGE +D+ E F FV RL
Sbjct: 250 AFHKAAPVGGIVLTKLDGTAKGGGALAASAATGAKVMFIGTGERIDDLEQFSPTRFVGRL 309
Query: 295 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMFS 335
LGMGD ++ + + + + + ++++++G T+ ++
Sbjct: 310 LGMGDIKALLE-MAKGLELQADEDQVKRIAKGKMTIEDFYA 349
>gi|339448384|ref|ZP_08651940.1| signal recognition particle protein [Lactobacillus fructivorans
KCTC 3543]
Length = 481
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 182/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A + + I E L E + EI ALL+ADV FK+VR+ +++
Sbjct: 1 MAFEGLTDRLQKAFKNLRGKGKISESDLRETMREIRLALLEADVNFKVVRQFVKTVQEKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ G N + I + + +EL M+ P+VIM VGLQG+GKTT+ K
Sbjct: 61 KGADVLEGLNPAQQIVKIVNDELTNMMGKSATPLVKSDKIPTVIMMVGLQGAGKTTSAGK 120
Query: 121 YAYYHQKKGW-KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + +P ++ AD +R A +QL++ + +P + T+ DPV+I +G++
Sbjct: 121 LAKKLKTDDHARPLMIAADVYRPAAIEQLEKVGEQVGVPVFQEGTDVDPVQIVQDGLKEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K N D +++DT+GR + + L +E++ + + NP+ ++ V+D+ GQ A D A F +
Sbjct: 181 DKNNNDYVLIDTAGRLQIDENLMDELKNIKKVANPNDILLVVDAMTGQNAVDTAVGFNDA 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + VI+TK+DG +GG ALS A T P++F+G GE +D+ +VF SR+LGMGD
Sbjct: 241 LDITGVILTKLDGDTRGGAALSIRAVTDKPIMFVGQGEKLDDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
F++K + +Q EL +K+ E +F
Sbjct: 301 MLSFIEKTQKEYDENQAKELTEKIKENSF 329
>gi|407462068|ref|YP_006773385.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045690|gb|AFS80443.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
koreensis AR1]
Length = 441
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 194/304 (63%), Gaps = 1/304 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKSSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL +L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELSSLLG-NESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K ++ ADT+R GA QLK K+ + YG D I G++ ++
Sbjct: 120 AKFLTRQGYKVGVIGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKNGLKHYEG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QPLDVILIDTAGRHKEEQDLLEEMDRINKIADPDLALLVIDGTIGQQCFNQAEAFHKTIP 239
Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 240 VGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDVQ 299
Query: 302 GFMD 305
+D
Sbjct: 300 AVLD 303
>gi|295693164|ref|YP_003601774.1| signal recognition particle protein ffh [Lactobacillus crispatus
ST1]
gi|295031270|emb|CBL50749.1| Signal recognition particle protein Ffh [Lactobacillus crispatus
ST1]
Length = 476
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINRASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTF 329
>gi|308274695|emb|CBX31294.1| Signal recognition particle protein [uncultured Desulfobacterium
sp.]
Length = 449
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 177/320 (55%), Gaps = 8/320 (2%)
Query: 15 QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV----NLDDLAAGHN 70
+Q+ + EK + E L E+ ALL+ADV +K+V+++ +IK+ + L GH
Sbjct: 20 KQLKGHGKLTEKNIEEGLKEVRMALLEADVHYKVVKKLVADIKERSLGQEVMASLTPGHQ 79
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
+I+ +EL +++ P IM VGLQGSGKTTT K A + ++KG
Sbjct: 80 VIKIVN----DELTRLMGSSHQEIVLSGSVPVSIMLVGLQGSGKTTTAGKIAIFLRQKGR 135
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
KP LV AD +R A DQL++ A + +P + S + DPV I ++ T +K CD +I+D
Sbjct: 136 KPFLVPADVYRPAAIDQLRKIAEQIGVPAFESSVDMDPVDICLKAKTTAQKLGCDTLILD 195
Query: 191 TSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 250
T+GR L E+ ++ A P ++ V D+ GQ A + +++F S+ +G VI+TKM
Sbjct: 196 TAGRLHINEELMAELSRIKNAVKPSDILLVADAMTGQDAVNISKSFDSSLDIGGVILTKM 255
Query: 251 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 310
DG A+GG ALS A T P+ FIG GE + E F SR+LGMGD F++K V
Sbjct: 256 DGDARGGAALSIKAITNKPIKFIGVGEKLSALEPFYPDRMSSRILGMGDILTFIEKAQSV 315
Query: 311 VPMDQQPELLQKLSEGNFTL 330
Q EL +KL + FTL
Sbjct: 316 SDEKQAVELERKLRKSQFTL 335
>gi|295425198|ref|ZP_06817901.1| signal recognition particle protein [Lactobacillus amylolyticus DSM
11664]
gi|295064974|gb|EFG55879.1| signal recognition particle protein [Lactobacillus amylolyticus DSM
11664]
Length = 476
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 178/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKISEEDINKASREIRLALLEADVNFKVVKDFIKKIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGETAVGLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEADEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +I+DT+GR + + L EE+ ++ + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVIIDTAGRLEIDEPLMEELERIKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ K+ E F
Sbjct: 301 MLTLIEKAQQDYDQKEAEKVAMKMKENTF 329
>gi|227878849|ref|ZP_03996756.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
gi|227861597|gb|EEJ69209.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
Length = 476
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 182/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDITGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTF 329
>gi|407795762|ref|ZP_11142720.1| signal recognition particle protein [Salimicrobium sp. MJ3]
gi|407020103|gb|EKE32817.1| signal recognition particle protein [Salimicrobium sp. MJ3]
Length = 446
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 183/338 (54%), Gaps = 15/338 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + IQ++ ++E+ + E E+ ALL+ADV FK+V++ IKKI
Sbjct: 1 MAFEGLSDRLQGTIQKIKGKGKVNEQDVKEMTREVRLALLEADVNFKVVKDF---IKKIR 57
Query: 61 N-------LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSG 113
++ L G +I+++ EL +++ + K P+VIM VGLQG+G
Sbjct: 58 ERAVGQEVMESLTPGQQVIKIVKE----ELSELMGGDESRIAVAKKPPTVIMMVGLQGAG 113
Query: 114 KTTTCTKYAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
KTTT K A +K KP L AD +R A DQL+ + P Y T++DPV IA
Sbjct: 114 KTTTAGKLANLLRKSYNRKPMLAAADVYRPAAIDQLETIGKQLDFPVYSEGTDADPVDIA 173
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQ 232
+ VE K++N D +I+DT+GR + L E+ +V EA NPD + V+D+ GQ A +
Sbjct: 174 RQAVEEAKEQNHDYLIIDTAGRLHIDGELMGELGRVKEAVNPDEIFLVVDAMTGQDAVNV 233
Query: 233 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 292
A++F + + + V++TK+DG +GG ALS A T P+ F+G GE +D EVF + S
Sbjct: 234 AESFDEQLDISGVLLTKLDGDTRGGAALSIKAVTGKPIKFVGMGEKLDALEVFHPERMAS 293
Query: 293 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
R+LGMGD ++K V Q EL K+ +FT
Sbjct: 294 RILGMGDMLSLIEKAETQVDEKQAKELEAKMRNASFTF 331
>gi|325302918|tpg|DAA34489.1| TPA_inf: signal recognition particle subunit Srp54 [Amblyomma
variegatum]
Length = 160
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 126/153 (82%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ ++
Sbjct: 8 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSVI 67
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++AAG NKRR+IQ A+F EL K++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 68 DIDEMAAGLNKRRMIQSAVFKELIKLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTK 127
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
AY++ KKGWK LVCADTFRAGAFDQLKQNAT
Sbjct: 128 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNAT 160
>gi|184155710|ref|YP_001844050.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
gi|183227054|dbj|BAG27570.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
Length = 484
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 182/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 9 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 68
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 69 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 128
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 129 LAKHLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 188
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 189 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQ 248
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMGD
Sbjct: 249 LDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGD 308
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K E +Q + + K+ E +F
Sbjct: 309 MMTLIEKAQENFDQEQATQAMAKMKENSF 337
>gi|218782478|ref|YP_002433796.1| signal recognition particle protein [Desulfatibacillum alkenivorans
AK-01]
gi|218763862|gb|ACL06328.1| signal recognition particle protein [Desulfatibacillum alkenivorans
AK-01]
Length = 442
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 173/312 (55%), Gaps = 8/312 (2%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN----LDDLAAGHNKRRIIQQA 78
+ EK + + L E+ ALL+ADV +K+V+ + IK+ L+ L G +I+ +
Sbjct: 22 LSEKNIQDGLKEVRLALLEADVHYKVVKTLIAAIKERAVGQEVLESLTPGQQVVKIVNE- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
EL ++ G P+ IM VGLQGSGKTTT K A Y + +G KP LV AD
Sbjct: 81 ---ELTNLMGGANEEINLGGGHPASIMLVGLQGSGKTTTAGKLAVYLRGQGRKPYLVPAD 137
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
+R A +QL + + IP Y S T+S P +IA +E CD +I+DT+GR +
Sbjct: 138 VYRPAAIEQLTKIGKELSIPVYPSDTDSKPEKIAELARIKCAQEGCDTMILDTAGRLHID 197
Query: 199 AALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGG 258
L E+ ++ T P ++ V D+ GQ A + A+AF ++ VG VI+TKMDG A+GG
Sbjct: 198 DELMAELGRIKATTPPSDILLVADAMTGQDAVNMAKAFNDAMDVGGVILTKMDGDARGGA 257
Query: 259 ALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPE 318
ALS + T P+ FIGTGE + FE F SR+LGMGD ++K + V + + E
Sbjct: 258 ALSIRSITGKPIKFIGTGEKSNAFEAFHPNRMASRILGMGDVMTLIEKAQDAVDVKKAAE 317
Query: 319 LLQKLSEGNFTL 330
L +KL + FTL
Sbjct: 318 LEKKLRKSQFTL 329
>gi|423335535|ref|ZP_17313310.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
gi|337728765|emb|CCC03884.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
Length = 481
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL K++ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGW-KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + + +P + AD +R A QL+Q A + +P + T+ DPV I EG+E
Sbjct: 121 LALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK + D +I+DT+GR + + L +E+ + E NP+ ++ V+DS GQ A + AQ F
Sbjct: 181 KKNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDK 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+++ VI+TK+DG +GG A+S A T P+ F+G GE M++ +VF SR+LGMGD
Sbjct: 241 LNITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + +Q E + K+ E F
Sbjct: 301 MMTLIEKAQKNFDEEQAQETMDKMRENTF 329
>gi|339009345|ref|ZP_08641917.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
gi|338773823|gb|EGP33354.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
Length = 480
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 176/330 (53%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ IK+
Sbjct: 1 MAFESLASRLQGAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKQFVARIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ +++ + + EL +++ P+VIM VGLQG+GKTTT K
Sbjct: 61 VGQDVLKSLTPGQMVIKVVNEELTELMGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A QK+ KP LV D +R A QL+ + P + + PV IA + +E K
Sbjct: 121 LAKLLQKQNRKPMLVACDIYRPAAIKQLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + D +I+DT+GR + L EE++QV E PD ++ V+D+ GQ A + A++F +
Sbjct: 181 ENHYDYVILDTAGRLHIDETLMEELQQVREVAKPDEILLVVDAMTGQDAVNVAESFNNQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K E V +D+ E+ +++ +G FT
Sbjct: 301 LSLIEKAQESVDVDKAKEMERQMRQGEFTF 330
>gi|194466489|ref|ZP_03072476.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
gi|194453525|gb|EDX42422.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
Length = 481
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL K++ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGW-KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + + +P + AD +R A QL+Q A + +P + T+ DPV I EG+E
Sbjct: 121 LALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK + D +I+DT+GR + + L +E+ + E NP+ ++ V+DS GQ A + AQ F
Sbjct: 181 KKNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDK 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+++ VI+TK+DG +GG A+S A T P+ F+G GE M++ +VF SR+LGMGD
Sbjct: 241 LNITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + +Q E + K+ E F
Sbjct: 301 MMTLIEKAQKNFDEEQAQETMDKMRENTF 329
>gi|58337566|ref|YP_194151.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM]
gi|227904208|ref|ZP_04022013.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus acidophilus
ATCC 4796]
gi|58254883|gb|AAV43120.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM]
gi|227868227|gb|EEJ75648.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus acidophilus
ATCC 4796]
Length = 476
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSENGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVADPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
+++ + + ++ +K+ E F
Sbjct: 301 MLSLIERAQQDYDAKEAQKVAEKMRENTF 329
>gi|403514808|ref|YP_006655628.1| signal recognition particle protein [Lactobacillus helveticus
R0052]
gi|403080246|gb|AFR21824.1| signal recognition particle protein [Lactobacillus helveticus
R0052]
Length = 476
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 180/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTF 329
>gi|161507707|ref|YP_001577663.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571]
gi|260101393|ref|ZP_05751630.1| signal recognition particle protein [Lactobacillus helveticus DSM
20075]
gi|417008883|ref|ZP_11945704.1| signal recognition particle protein [Lactobacillus helveticus MTCC
5463]
gi|160348696|gb|ABX27370.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571]
gi|260084804|gb|EEW68924.1| signal recognition particle protein [Lactobacillus helveticus DSM
20075]
gi|328465660|gb|EGF36877.1| signal recognition particle protein [Lactobacillus helveticus MTCC
5463]
Length = 476
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 180/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAEKVAEKMRENTF 329
>gi|421872835|ref|ZP_16304452.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
gi|372458250|emb|CCF14001.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
Length = 480
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 176/330 (53%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLASRLQGAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKQFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ +++ + + EL +++ P+VIM VGLQG+GKTTT K
Sbjct: 61 VGQDVLKSLTPGQMVIKVVNEELTELMGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A QK+ KP LV D +R A QL+ + P + + PV IA + +E K
Sbjct: 121 LAKLLQKQNRKPMLVACDIYRPAAIKQLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ + D +I+DT+GR + L EE++QV E PD ++ V+D+ GQ A + A++F +
Sbjct: 181 ENHYDYVILDTAGRLHIDETLMEELQQVREVAKPDEILLVVDAMTGQDAVNVAESFNNQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ VI+TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K E V +D+ E+ +++ +G FT
Sbjct: 301 LSLIEKAQESVDVDKAKEMERQMRQGEFTF 330
>gi|227515698|ref|ZP_03945747.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
gi|227085946|gb|EEI21258.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
Length = 476
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 121 LAKRLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 181 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQ 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMGD
Sbjct: 241 LDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K E +Q + + K+ E +F
Sbjct: 301 MMTLIEKAQENFDQEQATQAMAKMKENSF 329
>gi|398814569|ref|ZP_10573250.1| signal recognition particle protein [Brevibacillus sp. BC25]
gi|398036838|gb|EJL30047.1| signal recognition particle protein [Brevibacillus sp. BC25]
Length = 470
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 177/330 (53%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV D +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNRKPLLVAGDIYRPAAIKQLQVLGDQLNVPVFTLGDQVSPVEIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++++DT+GR + AL +E++Q+ E T PD ++ V+DS GQ A + A++F +
Sbjct: 181 TNHLDVVLIDTAGRLHIDEALMDELKQIREVTKPDEILLVVDSMTGQDAVNVAESFNSQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K V D+ ++ +++ +G FT
Sbjct: 301 LSLIEKAQASVDEDKARDMERQMRQGEFTF 330
>gi|227544363|ref|ZP_03974412.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|338202518|ref|YP_004648663.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
gi|227185626|gb|EEI65697.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
CF48-3A]
gi|336447758|gb|AEI56373.1| signal recognition particle protein [Lactobacillus reuteri SD2112]
Length = 481
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 180/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL K++ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGW-KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + + +P + AD +R A QL+Q A + +P + T+ DPV I EG+E
Sbjct: 121 LALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
KK + D +I+DT+GR + + L +E+ + E NP+ ++ V+DS GQ A + AQ F
Sbjct: 181 KKNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDK 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + V++TK+DG +GG A+S A T P+ F+G GE M++ +VF SR+LGMGD
Sbjct: 241 LDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + +Q E + K+ E F
Sbjct: 301 MMTLIEKAQKNFDEEQAQETMDKMRENTF 329
>gi|260663573|ref|ZP_05864463.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
gi|260552114|gb|EEX25167.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
Length = 484
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 9 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 68
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 69 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 128
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 129 LAKRLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 188
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 189 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVNTAQGFDDQ 248
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMGD
Sbjct: 249 LDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMGD 308
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K E +Q + + K+ E +F
Sbjct: 309 MMTLIEKAQENFDQEQATQAMAKMKENSF 337
>gi|329764770|ref|ZP_08256364.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329138734|gb|EGG42976.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 441
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 191/305 (62%), Gaps = 3/305 (0%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L ++ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++
Sbjct: 1 MLDNLRNNLRDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKQLEARSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G +++ I + +++EL K+L GK + F K K + I+ +G+QGSGKTT K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELAKLL--GKETDFDFKPNKQNKIIMLGIQGSGKTTVTAK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + K+G+ ++ ADT+R GA QLK K+ + YG D I G++ ++
Sbjct: 119 LAKFLTKQGYSVGVIGADTYRPGALVQLKTMCEKSNVEVYGEPNNKDSPDIVKNGLKHYE 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
D+II+DT+GRHK+E L EM Q+++ +NPDL I V+D +IGQ F+QA+AF +++
Sbjct: 179 NLPLDIIIIDTAGRHKEEKDLLSEMEQINKVSNPDLAILVIDGTIGQQCFNQAEAFHKTI 238
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
VG +I+TK+D AKGGGA++A AAT + ++++GTGE +D+ E F FV RLLGMGD
Sbjct: 239 PVGGIIITKLDSSAKGGGAIAASAATGAQIMYVGTGERIDDLEKFSPTRFVGRLLGMGDI 298
Query: 301 SGFMD 305
+D
Sbjct: 299 QAVLD 303
>gi|227824776|ref|ZP_03989608.1| signal recognition particle protein [Acidaminococcus sp. D21]
gi|226905275|gb|EEH91193.1| signal recognition particle protein [Acidaminococcus sp. D21]
Length = 448
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 175/330 (53%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L ++ ALL+ADV FK+V+E T IK+ V
Sbjct: 1 MAFEMLTDKLTAAIQKIRGQKTVTEQDLKETLRDVRLALLEADVNFKVVKEFTTKIKERV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL +L + P+VIM GLQG+GKTT+ K
Sbjct: 61 QGQKIDPNLTAGQYIVKVVHEELIALLGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + +E PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
CD +++DT+GR + L +E++ + A +PD ++ V+D+ GQ A A+AF +++
Sbjct: 181 ALLCDTVLIDTAGRLHIDEKLMDELKNIKSAVHPDEILLVVDAMTGQDAVTVAEAFNKAL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ +IVTK+DG A+GG LS + PV F+G GE +D + F SR+LGMGD
Sbjct: 241 GITGLIVTKLDGDARGGAVLSVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K E + +D L + + FTL
Sbjct: 301 LSLIEKAQEAIDVDSAKRLAESMKHNEFTL 330
>gi|385813594|ref|YP_005849987.1| Signal recognition protein Ffh [Lactobacillus helveticus H10]
gi|323466313|gb|ADX70000.1| Signal recognition protein Ffh [Lactobacillus helveticus H10]
Length = 476
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 180/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSKDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEVEKVAEKMRENTF 329
>gi|424811937|ref|ZP_18237177.1| signal recognition particle GTPase [Candidatus Nanosalinarum sp.
J07AB56]
gi|339756159|gb|EGQ39742.1| signal recognition particle GTPase [Candidatus Nanosalinarum sp.
J07AB56]
Length = 427
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 184/322 (57%), Gaps = 15/322 (4%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I ++Q+ S + DE+ + E +N+I R L+QADV +LV+E+ +I+ ++ G
Sbjct: 5 IKESVQKFSRNAVADEEAVEELVNDIQRDLIQADVDIELVQELSDSIRSEALKEEAPEGL 64
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
++ + + ++ +L +L G+ + P++ +P ++ GL G+GKTTT K A +++K+
Sbjct: 65 TRKEHVLEVVYGKLEALL--GEEA-EPQQ-EPHTVLLCGLFGAGKTTTAGKIADFYRKRE 120
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
KP L+ ADT R A DQL+Q A + FYG DPV + G + + D+++V
Sbjct: 121 LKPGLIAADTDRPAAVDQLEQIAGQVGAEFYGEKDADDPVEVVRRGRQEL---DADVVVV 177
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
D++GR+ +A L EE+ ++SE PD V + +GQ+A QA+ F +V + V+VTK
Sbjct: 178 DSAGRNSLDAPLREELSEISEVAEPDERYLVTPADLGQSAGSQAEEFADAVDITGVVVTK 237
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD AK GGAL A S V F+GTGE M + EVFD FV +LG D ++K+ E
Sbjct: 238 MDSSAKAGGALIACQKAGSQVEFVGTGEEMHDLEVFDPVSFVEDMLGQPDLESLLEKVEE 297
Query: 310 VVPMDQQP-ELLQKLSEGNFTL 330
+D P ELL EG FTL
Sbjct: 298 ---LDADPGELL----EGEFTL 312
>gi|352683795|ref|YP_004895779.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
gi|350278449|gb|AEQ21639.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
Length = 448
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 175/330 (53%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L ++ ALL+ADV FK+V+E T IK+ V
Sbjct: 1 MAFEMLTDKLTAAIQKIRGQKTVTEQDLKETLRDVRLALLEADVNFKVVKEFTTKIKERV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL +L + P+VIM GLQG+GKTT+ K
Sbjct: 61 QGQKIDPNLTAGQYIVKVVHEELIALLGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + +E PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
CD +++DT+GR + L +E++ + A +PD ++ V+D+ GQ A A+AF +++
Sbjct: 181 ALLCDTVLIDTAGRLHIDEKLMDELKNIKTAVHPDEILLVVDAMTGQDAVTVAEAFNKAL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ +IVTK+DG A+GG LS + PV F+G GE +D + F SR+LGMGD
Sbjct: 241 GITGLIVTKLDGDARGGAVLSVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K E + +D L + + FTL
Sbjct: 301 LSLIEKAQEAIDVDSAKRLAESMKHNEFTL 330
>gi|284047845|ref|YP_003398184.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
gi|283952066|gb|ADB46869.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
Length = 448
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 175/330 (53%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L E+ ALL+ADV FK+V+E I++
Sbjct: 1 MAFEILTDKLTAAIQKLRGQKTVSEQDLKETLREVRLALLEADVNFKVVKEFTAKIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL ++L + P+VIM VGLQG+GKTTT K
Sbjct: 61 MGQQVDPNLTPGQYIVKIVHEELIELLGGTQSKLNVAANPPTVIMLVGLQGAGKTTTVGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + + PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKQLDMPVFSMGDQVSPVEIARESLKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
CD +++DT+GR + L E++ + A NPD ++ V+D+ GQ A A +F +++
Sbjct: 181 ALLCDTVLIDTAGRLHVDETLMNELKDMKTAVNPDEILLVVDAMTGQDAVTVADSFNKAL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ +IVTK+DG A+GG LS A T PV F+G GE +D + F SR+LGMGD
Sbjct: 241 GITGLIVTKLDGDARGGAVLSVKAVTNCPVKFVGMGEKLDALQPFYPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K E + +D ++ + L + FTL
Sbjct: 301 LSLIEKAQEAIDVDSAKKMAESLKKNEFTL 330
>gi|359416559|ref|ZP_09208866.1| signal recognition particle protein Srp54 [Candidatus Haloredivivus
sp. G17]
gi|358033083|gb|EHK01681.1| signal recognition particle protein Srp54 [Candidatus Haloredivivus
sp. G17]
Length = 428
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 190/322 (59%), Gaps = 14/322 (4%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
+ +IQ+ S+ + +DE+ + E + +I R L+ ADV LV ++ I++ L+ G
Sbjct: 5 VKESIQKFSSKSAVDEEAVEELVKDIQRDLIAADVDVGLVSDLSDEIREEA-LEGKKDGL 63
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
++ + + ++N++ ++L KP + +P I+ GL G+GKTTT K A Y++K+G
Sbjct: 64 TRKEHVLETVYNKMEELLGQ-KPEI---EIEPQKILLSGLYGAGKTTTAAKLADYYRKRG 119
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
K L+ ADT R A+DQLKQ A KA FYG +P ++ +G++ + ++IIV
Sbjct: 120 LKTGLIAADTDRPAAYDQLKQMAEKADSEFYGDPEAENPSQVVEKGLQEL---DAEVIIV 176
Query: 190 DTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 249
D++GR+ + L +E+ V + PD VM + IGQ+A DQA+ F+ +V + VIVTK
Sbjct: 177 DSAGRNSLDDELKKELSDVEDVLRPDESYLVMPADIGQSAKDQAENFEDAVGITGVIVTK 236
Query: 250 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 309
MD AKGGGAL A + + + V FIGTGE + + EV+D +VS +LG + ++K+ E
Sbjct: 237 MDSSAKGGGALIACSMSDAQVKFIGTGEQVTDLEVYDPVKYVSEMLGQPNLESLLEKVEE 296
Query: 310 VVPMDQQPELLQKLSEGNFTLR 331
++ PE ++ EG FTL+
Sbjct: 297 ---LETDPE---EMLEGEFTLK 312
>gi|158522321|ref|YP_001530191.1| signal recognition particle protein [Desulfococcus oleovorans Hxd3]
gi|158511147|gb|ABW68114.1| signal recognition particle protein [Desulfococcus oleovorans Hxd3]
Length = 443
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 187/326 (57%), Gaps = 2/326 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KIVNLDD 64
L ++ +++ + EK +++ L E+ ALL+ADV +++V++ +I+ + V D
Sbjct: 5 LSDKLNSVFKKLKGQGTLTEKNIDDGLKEVRFALLEADVHYRIVKQFIADIRERAVGADV 64
Query: 65 LAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
L + +++I+ ++ EL +++ + P +M VGLQGSGKTTT K A Y
Sbjct: 65 LESLTPGQQVIK-IVYEELTRLMGETRQDLNLTGQAPVSVMLVGLQGSGKTTTAAKLAVY 123
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
+K+G KP LV AD +R A DQLK+ ++ ++P + S +PV I + +++ C
Sbjct: 124 LKKQGRKPFLVPADVYRPAAIDQLKKLGSQVQVPVFASDPGMNPVDICRQARVAAQQQGC 183
Query: 185 DLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 244
+ +++DT+GR + AL EE+ + +A +P ++ V D+ GQ A + AQ+F + + +G
Sbjct: 184 NTLLLDTAGRLHIDEALMEELVGIKQAVSPSDILLVADAMTGQDAVNIAQSFNERLDIGG 243
Query: 245 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 304
VI++KMDG A+GG ALS A T P+ F+G GE + E F S +LGMGD F+
Sbjct: 244 VILSKMDGDARGGAALSIKAVTGRPIKFVGVGEKTNALEAFHPDRMASSILGMGDVLSFI 303
Query: 305 DKIHEVVPMDQQPELLQKLSEGNFTL 330
+K VV + +L +KL + FTL
Sbjct: 304 EKAQSVVDEKKAADLERKLRKNEFTL 329
>gi|148544379|ref|YP_001271749.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|184153743|ref|YP_001842084.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227363196|ref|ZP_03847330.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|325682699|ref|ZP_08162215.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
gi|148531413|gb|ABQ83412.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus reuteri DSM 20016]
gi|183225087|dbj|BAG25604.1| signal recognition particle protein [Lactobacillus reuteri JCM
1112]
gi|227071802|gb|EEI10091.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus reuteri
MM2-3]
gi|324977049|gb|EGC14000.1| signal recognition particle protein [Lactobacillus reuteri MM4-1A]
Length = 481
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 180/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL K++ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGW-KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + + +P + AD +R A QL+Q A + +P + T+ DPV I EG+E
Sbjct: 121 LALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+K + D +I+DT+GR + + L +E+ + E NP+ ++ V+DS GQ A + AQ F
Sbjct: 181 QKNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILLVIDSMTGQNAVNTAQGFDDK 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + VI+TK+DG +GG A+S A T P+ F+G GE M++ +VF SR+LGMGD
Sbjct: 241 LDITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + +Q E + K+ E F
Sbjct: 301 MMTLIEKAQKNFDEEQAQETMDKMRENTF 329
>gi|227892628|ref|ZP_04010433.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus ultunensis
DSM 16047]
gi|227865560|gb|EEJ72981.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus ultunensis
DSM 16047]
Length = 476
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 180/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVKDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLTDLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + ++ +K+ E F
Sbjct: 301 MLSLIEKAQQDYDAKEAKKVAEKMRENTF 329
>gi|226313205|ref|YP_002773099.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
gi|226096153|dbj|BAH44595.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
Length = 470
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 177/329 (53%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV D +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNRKPLLVAGDIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVEIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++++DT+GR + AL +E++Q+ E T PD ++ V+D+ GQ A + A++F +
Sbjct: 181 TNHLDVVLIDTAGRLHIDEALMDELKQIREVTKPDEILLVVDAMTGQDAVNVAESFNSQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFT 329
++K V D+ ++ +++ +G FT
Sbjct: 301 LSLIEKAQASVDEDKARDMERQMRQGEFT 329
>gi|395242479|ref|ZP_10419476.1| Signal recognition particle protein [Lactobacillus pasteurii CRBIP
24.76]
gi|394480211|emb|CCI85716.1| Signal recognition particle protein [Lactobacillus pasteurii CRBIP
24.76]
Length = 476
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 180/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N EI ALL+ADV FK+V++ IK+
Sbjct: 1 MAFENLSERIQKALKNLTGKGKISEEDINTASREIRLALLEADVNFKVVKDFIKKIKQEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +EL KM+ T K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNDELTKMMGESSVKLTKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + ++P + E D +I EG+
Sbjct: 121 LAYHLQKTEHARPLLIAGDIYRPAAIDQLKQIGEQLEVPVFSKPDEKDVAKIVEEGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +I+DT+GR + + L +E+ +V P+ ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVIIDTAGRLEIDEKLMDELERVKAVAKPENILLVVDAMTGQAATDVARGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + + + ++ +K+ E F
Sbjct: 301 VLTLIEKAQQDYDVKEAKKVAEKMRENTF 329
>gi|395238273|ref|ZP_10416210.1| Signal recognition particle protein [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477845|emb|CCI86187.1| Signal recognition particle protein [Lactobacillus gigeriorum CRBIP
24.85]
Length = 476
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 178/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N EI ALL+ADV FK+V++ IK+
Sbjct: 1 MAFENLSERIQKALRNLTGKGKISEEDINAASREIRLALLEADVNFKVVKDFIKKIKQEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ + T K P+++M VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGESATTLTKSKHIPTIVMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + +P Y E D +I G+
Sbjct: 121 LAYHLQKTEHARPLLIAGDIYRPAAVDQLKQIGQQLNVPVYSEENEKDVSQIVARGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K D +++DT+GR + + L EE+ +V +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELEKVKAVAHPDNILLVVDAMTGQAATDVAKGFDER 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMGD
Sbjct: 241 LDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
+++ + + ++ +K+ E F
Sbjct: 301 VLTLIERAQQDYDAKEAQKVAKKMRENTF 329
>gi|296139328|ref|YP_003646571.1| signal recognition particle protein [Tsukamurella paurometabola DSM
20162]
gi|296027462|gb|ADG78232.1| signal recognition particle protein [Tsukamurella paurometabola DSM
20162]
Length = 522
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 187/343 (54%), Gaps = 25/343 (7%)
Query: 5 QLGGSIS--RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+LGG++S R ++++A I + EI ALL+ADV +VR + IK+
Sbjct: 8 RLGGALSGLRGKGRLTDADI------DATAREIRLALLEADVALPVVRAFVSRIKERAKG 61
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
+++A N + I + + EL +L K P+VIM GLQG+GKTT K A
Sbjct: 62 AEVSAALNPAQQIVKIVNEELVGILGGETRRINLAKTPPTVIMLAGLQGAGKTTLAGKLA 121
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY-------------TESDPV 169
++ +K+G P LV D R GA DQLK +A +P Y + + +DPV
Sbjct: 122 HHLKKQGHTPMLVACDLQRPGAVDQLKIVGERAGVPTYAPHPGTSVGGEGTLGVSAADPV 181
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAA 229
+A G+E K + D++IVDT+GR + L + R + +A +PD V+FV+D+ IGQ A
Sbjct: 182 EVARGGIEEAKAKQHDVVIVDTAGRLGIDEELMGQARAIRDAVDPDEVLFVLDAMIGQDA 241
Query: 230 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
AQAF + V V++TK+DG A+GG ALS T P++F TGE +D+F+VF
Sbjct: 242 VTTAQAFAEGVDFTGVVLTKLDGDARGGAALSVREITGKPILFASTGEKLDDFDVFHPDR 301
Query: 290 FVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTL 330
SR+LGMGD +++ +V MDQQ E K++ G TL
Sbjct: 302 MSSRILGMGDVLTLIEQAEQV--MDQQKAEEAAAKITSGELTL 342
>gi|395509368|ref|XP_003758970.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Sarcophilus harrisii]
Length = 150
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 117/137 (85%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
+KVLN L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F EL
Sbjct: 14 QKVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELV 73
Query: 85 KMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
K++DPG ++TP KGKP+VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFRAGA
Sbjct: 74 KLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGA 133
Query: 145 FDQLKQNATKAKIPFYG 161
FDQLKQNATKA+IPFYG
Sbjct: 134 FDQLKQNATKARIPFYG 150
>gi|168008842|ref|XP_001757115.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691613|gb|EDQ77974.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 281
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/107 (89%), Positives = 102/107 (95%)
Query: 228 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 287
AAFDQAQAFKQSV+VGAVIVTKMDGHAKGGGALSAVAATKSP+IFIGTGEHMDEFE F+
Sbjct: 11 AAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPIIFIGTGEHMDEFEAFET 70
Query: 288 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMF 334
K FVSRLLGMGDWSGFM+KI + VPMDQQPELLQKLSEGNFTLRIM+
Sbjct: 71 KTFVSRLLGMGDWSGFMEKIQDAVPMDQQPELLQKLSEGNFTLRIMY 117
>gi|340344419|ref|ZP_08667551.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519560|gb|EGP93283.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 441
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 193/306 (63%), Gaps = 5/306 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L ++ AI+++ ++ IDE+++ E + RALLQ+DV +LV E+ I+ I +
Sbjct: 1 MLDGLKNNLRDAIKKIVKSSGIDEELIKELSKNVQRALLQSDVNVRLVLEITKQIE-IRS 59
Query: 62 LDDLAA-GHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
L++ G +++ I + +++EL K+L GK S F K GK + ++ +G+QGSGKTT
Sbjct: 60 LNETPPPGLSRKDHIVKILYDELAKLL--GKESDFDFKSGKQNKLIMLGIQGSGKTTVTA 117
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + K+G+ ++ ADT+R GA QL+ K+ + YG + I G++ F
Sbjct: 118 KLAKFLTKQGYSVGVIGADTYRPGALVQLRTMCEKSNVEVYGEPNNKNSPDIVKNGLKYF 177
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
+ D+I++DT+GRHK+E L EM Q+++ PDL I V+D +IGQ F+QA+AF ++
Sbjct: 178 ESLPLDVILIDTAGRHKEEKDLLSEMEQINKVAEPDLAILVIDGTIGQQCFNQAEAFHKT 237
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ VG +I+TK+D AKGGGA++A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 238 IPVGGIIITKLDSSAKGGGAIAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGD 297
Query: 300 WSGFMD 305
+D
Sbjct: 298 IQAVLD 303
>gi|417886283|ref|ZP_12530430.1| signal recognition particle protein [Lactobacillus oris F0423]
gi|341593781|gb|EGS36606.1| signal recognition particle protein [Lactobacillus oris F0423]
Length = 480
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 178/329 (54%), Gaps = 1/329 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV F +V++ +++
Sbjct: 1 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFTVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL K++ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAAHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGW-KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + + +P + AD +R A QL+Q A + +P + T+ DPV I EG+E
Sbjct: 121 LALRLKNEDHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQS 239
K+ + D +I+DT+GR + + L +E+ + E NPD ++ V+DS GQ A + AQ F
Sbjct: 181 KQNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPDEILLVIDSMTGQNAVNTAQGFDDK 240
Query: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
+ + VI+TK+DG +GG A+S A T P+ F+G GE M + +VF SR+LGMGD
Sbjct: 241 LDITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMADLDVFHPDRMASRILGMGD 300
Query: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNF 328
++K + +Q E + K+ E F
Sbjct: 301 MMTLIEKAQKNFDEEQAQETMDKMRENTF 329
>gi|399047100|ref|ZP_10739232.1| signal recognition particle protein [Brevibacillus sp. CF112]
gi|398054933|gb|EJL47031.1| signal recognition particle protein [Brevibacillus sp. CF112]
Length = 471
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 177/330 (53%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE V+NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETVVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGSVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV AD +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNKKPLLVAADIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVDIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
+ D++I+DT+GR + AL +E++Q+ E PD ++ V+D+ GQ A + A++F +
Sbjct: 181 ANHLDVVILDTAGRLHIDEALMDELKQIREVAKPDEILLVVDAMTGQDAVNVAESFNSQL 240
Query: 241 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
+ V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 241 ELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDV 300
Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTL 330
++K V ++ ++ +++ +G FT
Sbjct: 301 LSLIEKAQASVDEEKARDMERQMRQGEFTF 330
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,013,333,375
Number of Sequences: 23463169
Number of extensions: 204526168
Number of successful extensions: 672732
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9726
Number of HSP's successfully gapped in prelim test: 1251
Number of HSP's that attempted gapping in prelim test: 647628
Number of HSP's gapped (non-prelim): 11643
length of query: 344
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 201
effective length of database: 9,003,962,200
effective search space: 1809796402200
effective search space used: 1809796402200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)