BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019215
         (344 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q96YW6|Y2062_SULTO MEMO1 family protein STK_20620 OS=Sulfolobus tokodaii (strain DSM
           16993 / JCM 10545 / NBRC 100140 / 7) GN=STK_20620 PE=3
           SV=1
          Length = 284

 Score = 34.7 bits (78), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 232 IITLQYTEDGLLSVDENREGHAAAFGDDIAIECLATEFNREIYVVQ-AHGSDAMVDEENC 290
           I++L Y   GL +V E ++  A  FG  + +  LA +FN++ YV++ A   D   D+ + 
Sbjct: 217 ILSLDYK--GLFNVVEEKDVTACGFGPMMTVLMLAKKFNKKPYVLKHATSGDTSGDKSSV 274

Query: 291 VFFLPHR 297
           V +L  R
Sbjct: 275 VGYLSVR 281


>sp|O54988|SLK_MOUSE STE20-like serine/threonine-protein kinase OS=Mus musculus GN=Slk
           PE=1 SV=2
          Length = 1233

 Score = 33.1 bits (74), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 54  EEVIGLEEQQRRHLERLHSKGVLWKHPEDQSRSIVFKLSHGGEVSADGNCLFTASQKAMT 113
           +E+  LE+QQ++ +ERL  +        D+++ I  K     E+S   N L    ++ M 
Sbjct: 874 QEIENLEKQQKQTIERLEQEHT--NRLRDEAKRI--KGEQEKELSKFQNVLKNRKKEVMN 929

Query: 114 ARDVDARELRRRTVRRFLEDLGSVGEGQRE 143
             +   RELRR   +R  E+L      Q +
Sbjct: 930 EVEKAPRELRRELTKRRKEELAQSQHAQEQ 959


>sp|A7GYK7|PUR7_CAMC5 Phosphoribosylaminoimidazole-succinocarboxamide synthase
           OS=Campylobacter curvus (strain 525.92) GN=purC PE=3
           SV=1
          Length = 236

 Score = 31.6 bits (70), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 62  QQRRHLERLHSKGVLWKHPEDQSRSIV-FKLSHGGEVSADGNCLFTASQKAMTARDVDAR 120
           Q  RHL R     +L+K  E++   +V FK+  G  +  DGN L        + R  DA 
Sbjct: 150 QTLRHLAR-EINSILFKFFEERKLKLVDFKIEFG--MDKDGNILLADEISPDSCRFWDAD 206

Query: 121 ELRRRTVRRFLEDLGSVGEGQREMI 145
              +    RF +DLGSV     E++
Sbjct: 207 TNEKLDKDRFRQDLGSVKVAYEEVL 231


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.133    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,022,016
Number of Sequences: 539616
Number of extensions: 5502525
Number of successful extensions: 13697
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 13696
Number of HSP's gapped (non-prelim): 4
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)