Query 019221
Match_columns 344
No_of_seqs 301 out of 2465
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 12:45:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019221hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rpc_A Possible metal-dependen 100.0 3E-39 1E-43 298.4 21.9 239 77-337 3-264 (264)
2 2wyl_A L-ascorbate-6-phosphate 100.0 3.7E-32 1.3E-36 261.8 29.0 250 73-341 32-327 (360)
3 3bv6_A Metal-dependent hydrola 100.0 6E-32 2E-36 262.2 26.9 250 73-341 56-352 (379)
4 3kl7_A Putative metal-dependen 100.0 3.1E-32 1.1E-36 247.5 23.2 196 75-322 26-227 (235)
5 1zkp_A Hypothetical protein BA 99.9 6E-23 2.1E-27 188.9 23.1 217 76-336 22-267 (268)
6 1vjn_A Zn-dependent hydrolase 99.9 1.4E-22 4.6E-27 182.2 19.5 164 77-296 11-179 (220)
7 3zwf_A Zinc phosphodiesterase 99.9 1.6E-22 5.3E-27 195.2 18.1 238 79-340 1-360 (368)
8 1y44_A Ribonuclease Z; zinc-de 99.9 5.5E-22 1.9E-26 187.0 20.4 224 79-340 1-307 (320)
9 2cbn_A Ribonuclease Z; phospho 99.9 1.2E-21 4.1E-26 183.3 18.4 219 79-337 2-306 (306)
10 3g1p_A Protein PHNP; C-P lyase 99.8 4.8E-20 1.6E-24 168.9 18.7 175 85-293 38-225 (258)
11 3md7_A Beta-lactamase-like; ss 99.8 1.5E-20 5.1E-25 175.6 15.5 213 75-338 25-292 (293)
12 2e7y_A TRNAse Z; tRNA maturati 99.8 3.9E-19 1.3E-23 163.7 16.0 217 84-337 8-280 (280)
13 3jxp_A Coenzyme PQQ synthesis 99.7 1.3E-17 4.4E-22 157.9 13.4 220 85-338 40-306 (321)
14 2ycb_A Beta-CAsp RNAse, cleava 99.7 1.2E-17 4.1E-22 171.7 9.0 252 11-291 112-417 (636)
15 3iek_A Ribonuclease TTHA0252; 99.7 9.2E-16 3.1E-20 150.8 16.0 185 79-291 1-224 (431)
16 2az4_A Hypothetical protein EF 99.6 2.2E-14 7.4E-19 140.6 21.6 198 77-292 5-261 (429)
17 2i7t_A Cleavage and polyadenyl 99.6 1.6E-14 5.4E-19 143.0 19.2 188 76-290 9-241 (459)
18 2xr1_A Cleavage and polyadenyl 99.6 6.3E-15 2.1E-19 151.6 16.9 251 11-291 116-420 (640)
19 3af5_A Putative uncharacterize 99.6 2.9E-15 9.9E-20 154.4 10.3 218 11-257 121-393 (651)
20 3zq4_A Ribonuclease J 1, RNAse 99.6 5E-14 1.7E-18 142.5 18.8 193 76-289 6-230 (555)
21 3m8t_A 'BLR6230 protein; subcl 99.6 3.4E-15 1.1E-19 138.3 7.5 177 84-296 53-248 (294)
22 3bk2_A RNAse J, metal dependen 99.5 7.4E-14 2.5E-18 141.6 15.5 165 76-258 14-213 (562)
23 4ax1_B Metallo-beta-lactamase 99.5 1.5E-14 5.1E-19 134.3 7.9 180 84-296 56-256 (303)
24 2i7x_A Protein CFT2; polyadeny 99.5 8.2E-14 2.8E-18 144.7 12.7 187 85-292 14-251 (717)
25 4b87_A DNA cross-LINK repair 1 99.5 2.1E-13 7.1E-18 131.2 12.5 177 90-321 31-222 (367)
26 3hnn_A Putative diflavin flavo 99.5 7.1E-14 2.4E-18 128.0 8.5 180 87-295 44-236 (262)
27 3l6n_A Metallo-beta-lactamase; 99.4 3.7E-13 1.3E-17 119.3 9.6 169 84-294 29-204 (219)
28 3esh_A Protein similar to meta 99.4 7.2E-13 2.5E-17 122.3 10.4 183 81-295 43-256 (280)
29 2r2d_A AGR_PTI_140P, Zn-depend 99.4 3.5E-12 1.2E-16 116.9 14.3 144 80-243 37-219 (276)
30 4efz_A Metallo-beta-lactamase 99.4 6.5E-13 2.2E-17 123.9 8.7 218 76-319 2-256 (298)
31 1m2x_A Class B carbapenemase B 99.4 1.6E-12 5.4E-17 115.8 9.7 170 83-294 24-200 (223)
32 1k07_A FEZ-1 beta-lactamase; m 99.3 1.3E-12 4.4E-17 119.3 8.2 176 85-295 24-220 (263)
33 2ohh_A Type A flavoprotein FPR 99.3 2.4E-12 8.2E-17 124.5 10.5 184 87-295 36-238 (404)
34 3adr_A Putative uncharacterize 99.3 6.6E-12 2.3E-16 114.0 12.7 160 87-294 21-211 (261)
35 4ad9_A Lactb2, beta-lactamase- 99.3 1E-12 3.5E-17 121.7 7.2 170 83-295 29-205 (289)
36 2zwr_A Metallo-beta-lactamase 99.3 7.1E-13 2.4E-17 116.8 5.2 161 84-295 11-189 (207)
37 1p9e_A Methyl parathion hydrol 99.3 2.2E-12 7.4E-17 122.3 8.7 174 84-292 95-304 (331)
38 2bib_A CBPE, teichoic acid pho 99.3 1.1E-11 3.9E-16 125.0 14.3 198 76-291 3-254 (547)
39 4dik_A Flavoprotein; TM0755, e 99.3 8.3E-12 2.8E-16 121.7 11.5 182 87-295 53-245 (410)
40 1e5d_A Rubredoxin\:oxygen oxid 99.3 4.5E-12 1.5E-16 122.5 9.4 179 85-295 34-231 (402)
41 2xf4_A Hydroxyacylglutathione 99.3 3.3E-13 1.1E-17 118.9 0.9 166 81-295 8-197 (210)
42 3dha_A N-acyl homoserine lacto 99.3 8.6E-12 2.9E-16 113.0 10.0 144 81-243 34-201 (254)
43 1ycg_A Nitric oxide reductase; 99.3 1.1E-11 3.8E-16 119.6 11.1 178 86-295 36-232 (398)
44 1a7t_A Metallo-beta-lactamase; 99.3 2.4E-12 8.3E-17 115.3 5.8 170 84-295 35-211 (232)
45 2q9u_A A-type flavoprotein; fl 99.3 7.3E-12 2.5E-16 121.8 9.5 181 85-295 40-235 (414)
46 2vw8_A PA1000, PQSE; quinolone 99.3 1.6E-11 5.5E-16 114.4 11.2 174 85-294 23-227 (303)
47 1mqo_A Beta-lactamase II; alph 99.3 2.7E-12 9.1E-17 114.6 4.7 170 84-295 39-215 (227)
48 2zo4_A Metallo-beta-lactamase 99.2 7.2E-12 2.5E-16 117.2 6.8 175 85-295 21-238 (317)
49 2qed_A Hydroxyacylglutathione 99.2 9.4E-12 3.2E-16 113.9 7.2 162 76-293 5-175 (258)
50 2gcu_A Putative hydroxyacylglu 99.2 1.4E-11 4.8E-16 111.9 8.3 187 85-320 14-217 (245)
51 3iog_A Beta-lactamase; hydrola 99.2 6.2E-12 2.1E-16 111.7 5.6 167 83-295 20-209 (227)
52 3zdk_A 5' exonuclease apollo; 99.2 1.2E-10 4E-15 110.7 14.7 135 132-281 23-169 (336)
53 1xm8_A Glyoxalase II; structur 99.2 7.8E-12 2.7E-16 114.2 6.2 160 82-294 7-173 (254)
54 1sml_A Protein (penicillinase) 99.2 1.7E-11 5.7E-16 112.2 8.4 178 81-295 30-230 (269)
55 3q6v_A Beta-lactamase; metallo 99.2 2.6E-12 9.1E-17 114.6 2.6 166 84-295 24-216 (233)
56 4hl2_A Beta-lactamase NDM-1; s 99.2 6.7E-12 2.3E-16 113.2 5.3 169 83-293 45-226 (243)
57 3r2u_A Metallo-beta-lactamase 99.2 1.3E-11 4.6E-16 122.3 6.9 183 76-291 22-220 (466)
58 1jjt_A IMP-1 metallo beta-lact 99.2 2.1E-11 7.3E-16 108.9 7.4 168 83-295 30-202 (228)
59 3tp9_A Beta-lactamase and rhod 99.2 2E-11 7E-16 121.0 6.6 139 77-241 2-153 (474)
60 3aj3_A MLR6805 protein, 4-pyri 99.2 9E-11 3.1E-15 107.4 10.5 140 81-242 30-212 (274)
61 2p18_A Glyoxalase II; metallop 99.1 6.3E-11 2.2E-15 111.4 8.4 143 77-241 27-184 (311)
62 2y8b_A Metallo-B-lactamase; hy 99.1 4.7E-11 1.6E-15 109.4 7.3 170 83-294 65-243 (265)
63 1qh5_A Glyoxalase II, protein 99.1 1E-10 3.5E-15 107.1 8.5 157 86-293 12-176 (260)
64 1ztc_A Hypothetical protein TM 99.1 1.4E-10 4.8E-15 103.2 6.9 166 84-295 33-216 (221)
65 2fhx_A SPM-1; metallo-beta-lac 99.1 7.7E-11 2.6E-15 106.1 4.2 166 85-295 29-226 (246)
66 2p97_A Hypothetical protein; p 99.0 1.2E-09 4.1E-14 95.7 11.6 159 84-294 22-185 (201)
67 2p4z_A Metal-dependent hydrola 99.0 4E-10 1.4E-14 104.4 8.1 204 87-337 34-284 (284)
68 4eyb_A Beta-lactamase NDM-1; m 98.9 4.8E-10 1.7E-14 103.0 3.9 165 85-292 74-252 (270)
69 2cfu_A SDSA1; SDS-hydrolase, l 98.7 1.2E-08 4.2E-13 105.0 5.1 171 86-294 123-348 (658)
70 2yhe_A SEC-alkyl sulfatase; hy 97.8 2.8E-08 9.5E-13 102.3 0.0 73 86-170 133-210 (668)
71 3h3e_A Uncharacterized protein 98.3 8.6E-06 3E-10 74.6 13.8 198 87-338 33-266 (267)
72 3bk2_A RNAse J, metal dependen 80.3 2.2 7.7E-05 42.5 6.0 63 264-340 379-442 (562)
73 3zq4_A Ribonuclease J 1, RNAse 76.0 2 6.7E-05 42.9 4.1 63 264-340 364-427 (555)
74 2i7t_A Cleavage and polyadenyl 74.0 2.4 8.1E-05 40.9 4.0 59 266-338 394-457 (459)
75 2az4_A Hypothetical protein EF 68.1 7.6 0.00026 36.8 6.1 50 266-337 380-429 (429)
76 3af5_A Putative uncharacterize 66.4 5.4 0.00018 40.5 4.8 58 265-337 591-650 (651)
77 2ycb_A Beta-CAsp RNAse, cleava 64.7 5.2 0.00018 40.5 4.3 58 265-337 576-635 (636)
78 2xr1_A Cleavage and polyadenyl 62.1 6.1 0.00021 40.0 4.3 58 265-337 580-639 (640)
79 3iek_A Ribonuclease TTHA0252; 41.6 29 0.00099 33.0 5.1 55 265-337 377-431 (431)
80 3zdk_A 5' exonuclease apollo; 40.7 15 0.00051 34.0 2.8 28 268-295 277-304 (336)
81 4b87_A DNA cross-LINK repair 1 21.5 56 0.0019 30.4 3.2 27 266-292 319-345 (367)
82 1eiw_A Hypothetical protein MT 20.6 30 0.001 26.5 0.9 19 136-156 6-24 (111)
83 3kf6_B Protein TEN1; OB fold, 20.1 2.2E+02 0.0077 21.5 5.6 27 76-102 19-51 (105)
No 1
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=100.00 E-value=3e-39 Score=298.40 Aligned_cols=239 Identities=13% Similarity=0.208 Sum_probs=186.9
Q ss_pred CceEEEEEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcc---c-C-CCCCCCCC-CccEEEecCCCCCCCChh
Q 019221 77 DVFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKF---L-K-SFQLSDLP-QVDCLLITQSLDDHCHLK 150 (344)
Q Consensus 77 ~~~~it~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~---~-~-~~~~~~lp-~iD~VlISH~H~DHld~~ 150 (344)
..|+|||+||||++|+.+|++|||||++++++++ .+|.+....++ + + ++++++++ ++|+|||||.|+||++..
T Consensus 3 ~~m~it~lGha~~li~~~g~~iLiDp~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~~~ 81 (264)
T 3rpc_A 3 AMTQYTHIRNATGKLTIKNTTFLIDPFLAPKDTY-PGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDT 81 (264)
T ss_dssp CCCEEEEEETTEEEEEETTEEEEESCCCCCTTCB-CCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSCHH
T ss_pred ceEEEEEEeCcEEEEEECCEEEEeCcccCCCcCc-cCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCCCH
Confidence 3689999999999999999999999999987663 23332110011 1 1 35566665 899999999999998765
Q ss_pred hHHHhhhcCCCceEEEc-cchHHHHhhcC-CceEEeCCCceEEeCcccCCcEEEEEeecCCcCC-CC--------CCCCC
Q 019221 151 TLKPLSKMSPNLKVIAT-PNAKTLLDPLF-QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGP-PW--------QRPEN 219 (344)
Q Consensus 151 tl~~L~~~~p~~~v~~~-~~~~~~l~~~~-~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~-~~--------~~~~~ 219 (344)
++..+. .++++|++ +....++++++ .++.++ +++++++ +++|+++|++|+.. .+ ...|+
T Consensus 82 ~~~~~~---~~~~v~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~-----~~~i~~~pa~H~~~~~~~~p~~~~~~~~~~ 151 (264)
T 3rpc_A 82 AINSIP---KSLPIFVQNTADKELITSQGFIDVRII--FESLEFN-----GITLRKTGGSHGTVEMYANPVLAPLAGDAM 151 (264)
T ss_dssp HHHHSC---TTSCEEESSHHHHHHHHHTTCSCEEEC--SSEEEET-----TEEEEEECCCSSCHHHHTSTTHHHHHCCCC
T ss_pred HHHhhc---cCCeEEEeCHHHHHHHHhcCCCeeEEe--cccEEEC-----CEEEEEeccccCCccccccccccccccccE
Confidence 554443 27899998 55566888775 456665 5789997 89999999997542 10 02479
Q ss_pred eEEEEeCCCceEEEEcCCCCCcchhhcc---cCccEEEEccccccCCCc---ccccCHHHHHHHHHHcCCCEEEEeeeCC
Q 019221 220 GYLVNSSQGQLTLYYEPHCVYNQNFLEK---ERSDIIITPVIKQLLPKF---TLVSGQEDAVKLAKLLHAKFIVPMKNGD 293 (344)
Q Consensus 220 g~vi~~~~g~~~i~~sGDt~~~~~~~~~---~~~Dl~il~~~g~~~~~~---~~h~~~eea~~~~~~l~~k~vip~H~~~ 293 (344)
||+|+.++ +.+|||+|||+|.++++++ .++|++++++ |.|.+.+ ..||+++||+++++.+++|+++|+||++
T Consensus 152 g~~i~~~~-~~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~-g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~vi~~H~~~ 229 (264)
T 3rpc_A 152 GVIFEAAD-EPTVYLVGDTVWTSDVEKALLRFDPNVIIMNT-GYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDT 229 (264)
T ss_dssp EEEEECTT-SCCEEECCSCCSCHHHHHHHHHHCCSEEEEEC-SCBCBTTCSSCSSCCHHHHHHHHHHCTTSEEEEESCSS
T ss_pred EEEEEeCC-ccEEEEECCcCchHHHHHHHHHhCCCEEEEec-CccccccccCCcccCHHHHHHHHHhCCcCeEEEEcccc
Confidence 99999864 3799999999999988765 3689999999 6776644 3599999999999999999999999999
Q ss_pred ccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 294 LDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 294 f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
|++ . ....+++++.+++.+.+.++.+|++||+++|
T Consensus 230 ~~~-------~--~~~~~~l~~~~~~~g~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 230 VNH-------T--ATSRKDVRKFIKGNNIESHVAVPEDGETITL 264 (264)
T ss_dssp STT-------B--CSCHHHHHHHHHHTTCTTTEECCCTTCEEEC
T ss_pred ccc-------c--ccCHHHHHHHHHHcCCCCcEEecCCCCEEeC
Confidence 985 2 5678999999988775568999999999875
No 2
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=100.00 E-value=3.7e-32 Score=261.80 Aligned_cols=250 Identities=16% Similarity=0.190 Sum_probs=186.9
Q ss_pred ccCCCceEEEEEeCcEEEEEeC-CcEEEEccccCCCCCC--Ccccc--------cccCCc-----cc-C-CCCCCCCCCc
Q 019221 73 AVATDVFKLTYLEGNSWLWDLD-GVKVLVDPILVGNLDF--GIPWL--------FDAGKK-----FL-K-SFQLSDLPQV 134 (344)
Q Consensus 73 ~~~~~~~~it~lGhss~li~~~-g~~ILiDP~~~g~~s~--p~~~~--------~~~~~~-----~~-~-~~~~~~lp~i 134 (344)
..+++.|+|+|+||||++|+.+ |.+||||||++ .... +.+.+ ..|.++ +. + .++.+++++|
T Consensus 32 ~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G-~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l~~i 110 (360)
T 2wyl_A 32 QVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCG-TGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQI 110 (360)
T ss_dssp CCCTTCEEEEEEETTEEEEECTTCCEEEESCCCC-CCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCC
T ss_pred cCCCCcEEEEEecccEEEEEeCCCCEEEEeecCC-CCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHcCCC
Confidence 3457789999999999999995 99999999764 2210 00000 001110 11 1 2444467789
Q ss_pred cEEEecCCCCCCCChhhHHHhhhcCC-CceEEEccchHHHHhhcCC---ceEEeCCCceEEeCcccCCcEEEEEeecCCc
Q 019221 135 DCLLITQSLDDHCHLKTLKPLSKMSP-NLKVIATPNAKTLLDPLFQ---NVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 210 (344)
Q Consensus 135 D~VlISH~H~DHld~~tl~~L~~~~p-~~~v~~~~~~~~~l~~~~~---~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~ 210 (344)
|+|||||.|+||++..++..|.++++ ++++|++.....++++++. +++++++|++++++ +++|+++|+.|+
T Consensus 111 d~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~g~~~~~~~~l~~g~~~~~g-----~~~v~~~~~~H~ 185 (360)
T 2wyl_A 111 DAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVK-----DIEIHALDAFDR 185 (360)
T ss_dssp SEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHHHTCCGGGEEECCTTCEEEET-----TEEEEEEECCCC
T ss_pred CEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHHcCCChheEEEcCCCCEEEEC-----CEEEEEEeccCc
Confidence 99999999999998778888877653 7889988777778877653 79999999999997 899999998764
Q ss_pred C-------------CC--C-CCCCCeEEEEeCCCceEEEEcCCCCCcchhhcc---cCccEEEEccccccCCCc-ccccC
Q 019221 211 G-------------PP--W-QRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEK---ERSDIIITPVIKQLLPKF-TLVSG 270 (344)
Q Consensus 211 g-------------~~--~-~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~---~~~Dl~il~~~g~~~~~~-~~h~~ 270 (344)
. +. . ...++||+|+.+ +.+|||+||+++...+.++ .++|++++++++ .+.+ ..||+
T Consensus 186 ~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~--g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~--~~~~~~~h~~ 261 (360)
T 2wyl_A 186 TALITLPADQKAAGVLPDGMDDRAVNYLFKTP--GGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGE--NPRGITDKMT 261 (360)
T ss_dssp ------------------CCTTTBEEEEEEET--TEEEEECTTCCCCTTHHHHHHHSCCCEEEEEBCC--CCTTCCCSBC
T ss_pred ccccccccccccccccccccCcccEEEEEEEC--CcEEEEeCCCCcCHHHHHHhhCCCCCEEEecCCC--CcccccCCCC
Confidence 2 10 0 124789999987 4799999999998877654 389999999843 2322 35999
Q ss_pred HHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhc----CCCCeeeccCCCCeEEcCCCC
Q 019221 271 QEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKE----LPDAQLLEPTPGEPLEIPAPS 341 (344)
Q Consensus 271 ~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~----~~~~~~~~~~~Ge~~~l~~~~ 341 (344)
+++|+++++.+++++++|+|+++|.. . ....+++++.+++. +...++.++++||++++..+.
T Consensus 262 ~~ea~~~~~~l~~k~vi~~H~~~~~~-------~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~~d~ 327 (360)
T 2wyl_A 262 SADMLRMGEALNAKVVIPFHHDIWSN-------F--QADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDK 327 (360)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTTBGG-------G--CCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTT
T ss_pred HHHHHHHHHHhCCCEEEEEeeccccc-------c--CCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEecCCC
Confidence 99999999999999999999999864 2 44577888888743 235788999999999997553
No 3
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=100.00 E-value=6e-32 Score=262.17 Aligned_cols=250 Identities=12% Similarity=0.116 Sum_probs=187.9
Q ss_pred ccCCCceEEEEEeCcEEEEEeC-CcEEEEccccCCCCCC--Cccccc--------ccCCc-----cc-C-CCCCCCCCCc
Q 019221 73 AVATDVFKLTYLEGNSWLWDLD-GVKVLVDPILVGNLDF--GIPWLF--------DAGKK-----FL-K-SFQLSDLPQV 134 (344)
Q Consensus 73 ~~~~~~~~it~lGhss~li~~~-g~~ILiDP~~~g~~s~--p~~~~~--------~~~~~-----~~-~-~~~~~~lp~i 134 (344)
..+++.++|+|+||||++|+.+ |.+||||||++ .... +.+++. .|.++ +. + .++.+++++|
T Consensus 56 ~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G-~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~~i 134 (379)
T 3bv6_A 56 VVEPNTFSMWWLGCTGIWLKSAGNTNLSIDFWCG-TGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEI 134 (379)
T ss_dssp CCCTTCEEEEEEETTEEEEEETTCCEEEESCCCC-CCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCC
T ss_pred cCCCCceEEEEecccEEEEEeCCCCEEEEccCCC-CCccccccccccccchhheecCccccCccccCCCCccChHHCCCC
Confidence 3457789999999999999996 99999999764 3321 011110 01110 11 1 2444457789
Q ss_pred cEEEecCCCCCCCChhhHHHhhhcCC-CceEEEccchHHHHhhcCC---ceEEeCCCceEEeCcccCCcEEEEEeecCCc
Q 019221 135 DCLLITQSLDDHCHLKTLKPLSKMSP-NLKVIATPNAKTLLDPLFQ---NVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 210 (344)
Q Consensus 135 D~VlISH~H~DHld~~tl~~L~~~~p-~~~v~~~~~~~~~l~~~~~---~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~ 210 (344)
|+|||||.|+||++..++..+.++++ ++++|++.....++++++. +++++++|++++++ +++|+++|+.|+
T Consensus 135 D~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~l~~g~~~~~g-----~~~v~~~~~~H~ 209 (379)
T 3bv6_A 135 DAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIG-----DVKIRVLDSFDR 209 (379)
T ss_dssp SEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHHHTCCGGGEEECCTTCEEEET-----TEEEEEEECCCH
T ss_pred CEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHHcCCChhhEEEeCCCCEEEEC-----CEEEEEEecccc
Confidence 99999999999998778888877664 7899988777778877642 78999999999997 899999998764
Q ss_pred C------------CC--C---CCCCCeEEEEeCCCceEEEEcCCCCCcchhhccc---CccEEEEccccccCCCc-cccc
Q 019221 211 G------------PP--W---QRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKE---RSDIIITPVIKQLLPKF-TLVS 269 (344)
Q Consensus 211 g------------~~--~---~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~~---~~Dl~il~~~g~~~~~~-~~h~ 269 (344)
. ++ . ...++||+|+.+ +.+|||+||+++...+.+++ ++|++++++++ .+.+ ..||
T Consensus 210 ~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~--g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~--~~~~~~~h~ 285 (379)
T 3bv6_A 210 TALVTLPKGVSSYDKAILDGMDERAVNYLIETS--GGSVYHSGDSHYSNYYAKHGNDYQIDVALLSYGE--NPRGVTDKM 285 (379)
T ss_dssp HHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEET--TEEEEECTTCCCCTTHHHHHHHSCCSEEEEEBCC--CCTTCCCSB
T ss_pred cccccccccccccccccccccCCceEEEEEEeC--CeEEEEeCCCCccHHHHHHhhcCCCCEEEecCCC--CcccccccC
Confidence 1 00 0 012689999987 47999999999988776543 89999999843 3322 3599
Q ss_pred CHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhc----CCCCeeeccCCCCeEEcCCCC
Q 019221 270 GQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKE----LPDAQLLEPTPGEPLEIPAPS 341 (344)
Q Consensus 270 ~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~----~~~~~~~~~~~Ge~~~l~~~~ 341 (344)
++++|+++++.+++|+++|+|+++|.. . ....+++++.+++. +...+++++++||++++..+.
T Consensus 286 ~~~ea~~~~~~l~~k~vi~~H~~~~~~-------~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~d~ 352 (379)
T 3bv6_A 286 TSSDVLRAAESLDCQVVVPFHHDIWAN-------F--QNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYPTDK 352 (379)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTSBGG-------G--CCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTT
T ss_pred CHHHHHHHHHHcCCCEEEEEeeccccc-------c--cCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEecCCC
Confidence 999999999999999999999999864 2 45678888888742 235788899999999996543
No 4
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=100.00 E-value=3.1e-32 Score=247.54 Aligned_cols=196 Identities=21% Similarity=0.353 Sum_probs=160.0
Q ss_pred CCCceEEEEEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHH
Q 019221 75 ATDVFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKP 154 (344)
Q Consensus 75 ~~~~~~it~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~ 154 (344)
+.++|+|+|+|||||+|+.++.+|||||+++. . ..++++++|+|||||.|+||++..++..
T Consensus 26 ~~~~~~it~lg~s~~li~~~~~~iliDpg~~~-~------------------~~~~~~~id~VliTH~H~DH~~~~~l~~ 86 (235)
T 3kl7_A 26 SGKELTITFIKHGSLMLTYDNHSIQVDPVSEY-A------------------DYTTFPKADIILITHEHGDHLDPKAIQA 86 (235)
T ss_dssp TSCEEEEEEEETTEEEEEETTEEEEESCCTTT-C------------------CTTSSCCCSEEEECCSSTTTCCHHHHHH
T ss_pred CCCCeEEEEEcceEEEEEECCEEEEECCCCCc-c------------------chhhCCCCCEEEECCCccccCCHHHHHH
Confidence 35789999999999999999999999996532 1 0235568999999999999998778887
Q ss_pred hhhcCCCceEEEccchHHHHhhcCCceEEeCCCc-eEEeCcccCCcEEEEEeecCCcCC-----CCCCCCCeEEEEeCCC
Q 019221 155 LSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQ-SSEIEGRNGSKLRVKATAGPVLGP-----PWQRPENGYLVNSSQG 228 (344)
Q Consensus 155 L~~~~p~~~v~~~~~~~~~l~~~~~~i~~l~~~~-~~~~~~~~~~~~~i~~~p~~~~g~-----~~~~~~~g~vi~~~~g 228 (344)
+.+ +++++|+++.....++ ++.++++|+ +++++ +++|+++|+.|+.. .....++||+|+.+
T Consensus 87 ~~~--~~~~v~~~~~~~~~l~----~~~~l~~g~~~~~~g-----~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~-- 153 (235)
T 3kl7_A 87 VEK--SDTEIIANENSQKKLG----KGKVLKNGDTDTSIS-----YMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFD-- 153 (235)
T ss_dssp HCC--TTCEEEECHHHHHHHT----CSEECCTTCEECCST-----TCEEEEEECCCCSTTGGGTSCTTTSEEEEEEET--
T ss_pred hhc--CCCEEEEcHHHHHHhc----CcEEecCCCEEEEEC-----CEEEEEEEeecCCCccccccCCCCceEEEEEeC--
Confidence 753 3789998887776664 468899999 99997 89999999987532 11123579999986
Q ss_pred ceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccC
Q 019221 229 QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEG 308 (344)
Q Consensus 229 ~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~ 308 (344)
+.+|||+||+++.+.+.+++++|++++|+++ ..||+++||+++++.+++|+++|+||++ .
T Consensus 154 g~~i~~~GDt~~~~~~~~l~~~Dv~il~~~~------~~h~~~~ea~~~~~~l~~k~vip~H~~~--------------~ 213 (235)
T 3kl7_A 154 GLRVYIAGDTEDIPEMKDLKDIDIAFLPVNQ------PYTMTVSQAAKAARMFSPKILYPYHYGD--------------T 213 (235)
T ss_dssp TEEEEECCSCCSCGGGGGCCSCSEEEEECCT------TTSCCHHHHHHHHHHHCCSEEEEESCTT--------------C
T ss_pred CeEEEEECCCCchhhHHhhcCCCEEEECCCC------CcccCHHHHHHHHHHcCCCEEEEEcCCC--------------C
Confidence 4899999999999988888899999999943 2488999999999999999999999986 2
Q ss_pred CHHHHHHHHHhcCC
Q 019221 309 TVESFKELLSKELP 322 (344)
Q Consensus 309 ~~e~~~~~~~~~~~ 322 (344)
+++.|++.+++.+.
T Consensus 214 ~~~~~~~~l~~~gi 227 (235)
T 3kl7_A 214 KIGELKDALKDSGI 227 (235)
T ss_dssp CTTHHHHHTTTSCC
T ss_pred CHHHHHHHHhhCCC
Confidence 46788888876543
No 5
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.91 E-value=6e-23 Score=188.86 Aligned_cols=217 Identities=12% Similarity=0.154 Sum_probs=158.6
Q ss_pred CCceEEEEEe-----------CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCC
Q 019221 76 TDVFKLTYLE-----------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLD 144 (344)
Q Consensus 76 ~~~~~it~lG-----------hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~ 144 (344)
...|+|++|| ++|++|+.++..|||||.. .. . +++... .+..+||+|||||.|+
T Consensus 22 ~~~m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~---~~--~--------~~l~~~--~~~~~i~~v~iTH~H~ 86 (268)
T 1zkp_A 22 SNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGS---GV--L--------AQLQKY--ITPSDIDAVVLSHYHH 86 (268)
T ss_dssp SSCEEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCT---TH--H--------HHHTTT--CCGGGCCEEECSCCCH
T ss_pred CCCcEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCH---HH--H--------HHHHHh--CCcccCCEEEEecCCc
Confidence 4579999999 8999999999999999933 21 0 111111 1234799999999999
Q ss_pred CCCChhhHHHhhh----------cCCCceEEEccchHHHHhhc----CCceEEeCCCceEEeCcccCCcEEEEEeecCCc
Q 019221 145 DHCHLKTLKPLSK----------MSPNLKVIATPNAKTLLDPL----FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 210 (344)
Q Consensus 145 DHld~~tl~~L~~----------~~p~~~v~~~~~~~~~l~~~----~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~ 210 (344)
||+ ..+..|.+ +.+++++|+++.....++.. ..++.+++++++++++ +++|+++++.|+
T Consensus 87 DH~--~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~~~H~ 159 (268)
T 1zkp_A 87 DHV--ADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHEPHTKGIPYNPEETLQIG-----PFSISFLKTVHP 159 (268)
T ss_dssp HHH--TTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTCBTTTEEEEECCTTSCEEET-----TEEEEEEECCSS
T ss_pred hhh--CCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcccCCccceEEecCCCeEEEC-----CEEEEEEECCCC
Confidence 995 44444432 12368899888887777654 1467889999999997 899998887764
Q ss_pred CCCCCCCCCeEEEEeCCCceEEEEcCCCCCcchhhcc-cCccEEEEccccccCCCc---ccccCHHHHHHHHHHcCCCEE
Q 019221 211 GPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEK-ERSDIIITPVIKQLLPKF---TLVSGQEDAVKLAKLLHAKFI 286 (344)
Q Consensus 211 g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~-~~~Dl~il~~~g~~~~~~---~~h~~~eea~~~~~~l~~k~v 286 (344)
. ...+|+|+.+ +.+++|+||+.+.+.+.+. .++|++++++ ..+...+ ..|+++++++++++.+++|++
T Consensus 160 ~-----~~~~~~i~~~--~~~i~~~GD~~~~~~~~~~~~~~d~li~e~-~~~~~~~~~~~~H~~~~~a~~~~~~~~~~~l 231 (268)
T 1zkp_A 160 V-----TCFAMRITAG--NDIVVYSADSSYIPEFIPFTKDADLFICEC-NMYAHQEAAKAGHMNSTEVASIAKDANVKEL 231 (268)
T ss_dssp S-----CCEEEEEEET--TEEEEECCSCCCCTTHHHHHTTCSEEEEEC-CBCTTSCCGGGTCCBHHHHHHHHHHTTCSEE
T ss_pred C-----CceEEEEEEC--CeEEEEeCCCCCCHHHHHHHcCCCEEEEEC-CCCccccccCCCCCCHHHHHHHHHHcCCCEE
Confidence 2 2469999887 4799999999998777664 4899999998 3222111 238999999999999999999
Q ss_pred EEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEE
Q 019221 287 VPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLE 336 (344)
Q Consensus 287 ip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~ 336 (344)
+++|++... ..+++.+.+++.- +.++..+..|++++
T Consensus 232 il~H~~~~~-------------~~~~~~~~~~~~~-~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 232 LLTHLPHTG-------------NPADLVTEAKQIF-SGHITLAHSGYVWN 267 (268)
T ss_dssp EEESBCSSS-------------CTHHHHHHHHTTC-CSEEEECCTTCEEE
T ss_pred EEECCCCCC-------------ChHHHHHHHHHhC-CCCEEEEeCCcccc
Confidence 999998632 2345555554432 23678888999874
No 6
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.90 E-value=1.4e-22 Score=182.19 Aligned_cols=164 Identities=16% Similarity=0.204 Sum_probs=117.1
Q ss_pred CceEEEEEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhh
Q 019221 77 DVFKLTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLS 156 (344)
Q Consensus 77 ~~~~it~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~ 156 (344)
.-|..+|+||||++|+.+|.+|||||+.+ ... +.. +..++|+|||||.|+||++.. .|.
T Consensus 11 ~~~~~~~~~~~~~li~~~~~~iLiD~g~~-~~~----------------~~~-~~~~id~VliTH~H~DH~~~~---~l~ 69 (220)
T 1vjn_A 11 HHMKITWFGHACFALEMEGKTIVTDPFDE-SVG----------------YPI-PNVTADVVTESHQHFDHNAHH---LVK 69 (220)
T ss_dssp -CEEEEEEETTEEEEEETTEEEEESCCC----------------------CC-CCCBCSEEECSSCC---CGGG---GCB
T ss_pred cceeeEEccCCEEEEEECCEEEEEcCCCC-cCC----------------CCc-CCCCcCEEEECCCCCCCCCch---Hhc
Confidence 45889999999999999999999999653 111 111 235899999999999998633 233
Q ss_pred hcCCCceEEEccchHHHHhhcCCceEEeCCCceEEeCcccCCcEEEEEeecCCcCC-CCC-CCCCeEEEEeCCCceEEEE
Q 019221 157 KMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGP-PWQ-RPENGYLVNSSQGQLTLYY 234 (344)
Q Consensus 157 ~~~p~~~v~~~~~~~~~l~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~-~~~-~~~~g~vi~~~~g~~~i~~ 234 (344)
. +.+++ .. +++++++ +++|+++|+.|... +.. +...||+|+.+ +.+|||
T Consensus 70 ~---~~~vi------------------~~-~g~~~~~-----~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~--g~~i~~ 120 (220)
T 1vjn_A 70 G---NFRVI------------------DR-PGAYTVN-----GVKIKGVETFHDPSHGRERGKNIVFVFEGE--GIKVCH 120 (220)
T ss_dssp S---SCEEE------------------CS-SEEEEET-----TEEEEEEEEEEC-------CEEEEEEEEET--TEEEEE
T ss_pred C---CCEEE------------------cC-CCeEEEC-----CEEEEEEeeecCCCCCccCCCcEEEEEEEC--CeEEEE
Confidence 2 44443 11 2266776 89999999886431 111 12379999987 479999
Q ss_pred cCCCCCcchhh---cccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCccC
Q 019221 235 EPHCVYNQNFL---EKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDS 296 (344)
Q Consensus 235 sGDt~~~~~~~---~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~ 296 (344)
+||+++.+.+. ..+++|++++++++ + .||++++|+++++.+++++++|+|++.+.+
T Consensus 121 ~GDt~~~~~~~~~~~~~~~Dvlil~~g~-~-----~h~~~~~a~~~~~~~~~k~vi~~H~~~~~~ 179 (220)
T 1vjn_A 121 LGDLGHVLTPAQVEEIGEIDVLLVPVGG-T-----YTIGPKEAKEVADLLNAKVIIPMHYKTKYL 179 (220)
T ss_dssp CTTCCSCCCHHHHHHHCCCSEEEEECCS-S-----SSCCHHHHHHHHHHTTCSEEEEESCCCSSC
T ss_pred eCCCCCcchHHHHHhhCCCCEEEEcCCC-c-----CcCCHHHHHHHHHhcCCCEEEEEecccccc
Confidence 99999886422 23589999999843 2 388999999999999999999999999853
No 7
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.89 E-value=1.6e-22 Score=195.23 Aligned_cols=238 Identities=17% Similarity=0.117 Sum_probs=145.5
Q ss_pred eEEEEEe-----------CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCC
Q 019221 79 FKLTYLE-----------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHC 147 (344)
Q Consensus 79 ~~it~lG-----------hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHl 147 (344)
|+|++|| +||++|+.++.+||||| |.... ..+. + ..+. ..+||+|||||.|+||+
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~---G~g~~--~~l~----~--~~~~---~~~id~I~iTH~H~DHi 66 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDC---GEGTQ--TQLM----K--SQLK---AGRITKIFITHLHGDHF 66 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECC---CTTHH--HHHH----H--SSSC---GGGEEEEECCCSSGGGT
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeC---ChhHH--HHHH----H--cCCC---hHHCCEEEECCCChHHh
Confidence 6889997 89999999999999999 53220 0010 0 0222 23799999999999996
Q ss_pred ChhhHHHhhhc----------CCCceEEEccchHHHHhhc---------C-CceEEeCCC--------------------
Q 019221 148 HLKTLKPLSKM----------SPNLKVIATPNAKTLLDPL---------F-QNVTYVEPG-------------------- 187 (344)
Q Consensus 148 d~~tl~~L~~~----------~p~~~v~~~~~~~~~l~~~---------~-~~i~~l~~~-------------------- 187 (344)
.++..|... .+.+++|+++....+++.. + ..++++++.
T Consensus 67 --~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~ 144 (368)
T 3zwf_A 67 --FGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADS 144 (368)
T ss_dssp --TTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCGGGSCC--------------
T ss_pred --CcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCcccccccccccccccccccc
Confidence 334333221 1267898888777666541 1 256777642
Q ss_pred -------ceEEeCc-------ccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCC--------------------------
Q 019221 188 -------QSSEIEG-------RNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQ-------------------------- 227 (344)
Q Consensus 188 -------~~~~~~~-------~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~-------------------------- 227 (344)
+++.++. -..++++|+++|..|..+ ..||+|+.++
T Consensus 145 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~V~a~~~~H~vp-----~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~ 219 (368)
T 3zwf_A 145 PPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLFHRIP-----SFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKN 219 (368)
T ss_dssp -----CCCEECCBTTTTBEEEEECSSEEEEEEEEESSSC-----EEEEEEEECC--------------------------
T ss_pred CcccccccccccccccCceeEEeCCCEEEEEEeccCCCc-----eEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCC
Confidence 2221100 001489999999887532 4688886531
Q ss_pred ----------------------CceEEEEcCCCCC--cchhhcc-cCccEEEEccccccCCCc------ccccCHHHHHH
Q 019221 228 ----------------------GQLTLYYEPHCVY--NQNFLEK-ERSDIIITPVIKQLLPKF------TLVSGQEDAVK 276 (344)
Q Consensus 228 ----------------------g~~~i~~sGDt~~--~~~~~~~-~~~Dl~il~~~g~~~~~~------~~h~~~eea~~ 276 (344)
.+.+|+|+|||++ ...+.+. .++|++|+++ .|.... ..||+++||++
T Consensus 220 G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~~~~~~~~~~Dlli~Ea--t~~~~~~~~a~~~~H~t~~~A~~ 297 (368)
T 3zwf_A 220 GISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEA--TLDDAQMDKAKEHGHSTPQMAAT 297 (368)
T ss_dssp ----------------------CCCEEEEECSCSEECSSHHHHHTTTCSEEEEEC--CSCGGGHHHHHHTTCCCHHHHHH
T ss_pred CCeEEecCCEEEEhHHhccccccceEEEEEecCCcccchhHHHHhcCCCEEEEec--CCChHHHhhhhcCCCCCHHHHHH
Confidence 0479999999998 5555554 4899999997 344321 23999999999
Q ss_pred HHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEcCCC
Q 019221 277 LAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEIPAP 340 (344)
Q Consensus 277 ~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l~~~ 340 (344)
+++.+++|.++++|++..-..+.... .......+++++.+++...+..+.+.+.|++++|...
T Consensus 298 ~a~~~~~k~lil~H~s~ry~~~~~~~-~~~~~~~~~~~~ea~~~f~~~~~~~a~dg~~~~i~~~ 360 (368)
T 3zwf_A 298 FAKLCRAKRLVLTHFSQRYKPVALAR-EGETDGIAELKKQAESVLDLQEVTLAEDFMVISIPIK 360 (368)
T ss_dssp HHHHTTCSEEEEECBCCCC----------------------------CEEEECCTTCEEECCC-
T ss_pred HHHHcCCCEEEEEeeCcccCcccccc-ccccchHHHHHHHHHHhcCCCceEEecCCcEEEeecC
Confidence 99999999999999997542000000 0001134455555554433346788899999999643
No 8
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.89 E-value=5.5e-22 Score=187.01 Aligned_cols=224 Identities=15% Similarity=0.101 Sum_probs=155.8
Q ss_pred eEEEEEe-----------CcEEEEEe---CCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCC
Q 019221 79 FKLTYLE-----------GNSWLWDL---DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLD 144 (344)
Q Consensus 79 ~~it~lG-----------hss~li~~---~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~ 144 (344)
|+|++|| +||++|+. ++.+|||||.. .. . +++..... ++.+||+|||||.|+
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~---~~-~---------~~l~~~~~-~~~~i~~I~iTH~H~ 66 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGE---AT-Q---------HQMLHTTI-KPRKIEKIFITHMHG 66 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCT---TH-H---------HHHTTSSC-CGGGEEEEECSBCCG
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCH---HH-H---------HHHHHcCC-CHHHcCEEEEeCCCh
Confidence 5788887 79999999 89999999933 21 0 11111111 234789999999999
Q ss_pred CCC-ChhhHHHh---hhcCCCceEEEccchHHHHhhc---C-------CceEEeCCCceEEeCcccCCcEEEEEeecCCc
Q 019221 145 DHC-HLKTLKPL---SKMSPNLKVIATPNAKTLLDPL---F-------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVL 210 (344)
Q Consensus 145 DHl-d~~tl~~L---~~~~p~~~v~~~~~~~~~l~~~---~-------~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~ 210 (344)
||+ +...+... ..+.+++++|+++....+++.. . .+++++++|+.++++ +++|+++|..|+
T Consensus 67 DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~v~~~p~~H~ 141 (320)
T 1y44_A 67 DHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDD-----QFIVTAVSVIHG 141 (320)
T ss_dssp GGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECS-----SEEEEEEECBSS
T ss_pred hhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHHhhccCCCCceEEEEcCCCceEecC-----CEEEEEEEccCC
Confidence 997 34443321 1122367899888876666542 1 257889999999886 899999997764
Q ss_pred CCCCCCCCCeEEEEeC------------------------------------------------CCceEEEEcCCCCCcc
Q 019221 211 GPPWQRPENGYLVNSS------------------------------------------------QGQLTLYYEPHCVYNQ 242 (344)
Q Consensus 211 g~~~~~~~~g~vi~~~------------------------------------------------~g~~~i~~sGDt~~~~ 242 (344)
.. ..||+++.. .++.+|+|+||+++.+
T Consensus 142 ~~-----~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~ 216 (320)
T 1y44_A 142 VE-----AFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSD 216 (320)
T ss_dssp SS-----BEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEECCSCBCCH
T ss_pred CC-----cceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHH
Confidence 22 246666531 0147999999999998
Q ss_pred hhhcc-cCccEEEEccccccCCC------cccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHH
Q 019221 243 NFLEK-ERSDIIITPVIKQLLPK------FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKE 315 (344)
Q Consensus 243 ~~~~~-~~~Dl~il~~~g~~~~~------~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~ 315 (344)
.+.+. .++|++|+++. |... ...||++++|+++++.+++++++++|++.... ....+++.+
T Consensus 217 ~~~~~~~~~D~li~E~t--~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lil~H~s~~~~----------~~~~~~~~~ 284 (320)
T 1y44_A 217 KLKELARDCDVMVHEAT--FAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQ----------GDASLELQK 284 (320)
T ss_dssp HHHHHTTTCSEEEEECC--BCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTSC----------TTHHHHHHH
T ss_pred HHHHHhCCCCEEEEecc--CCcchHhHHhhcCCCCHHHHHHHHHHcCCCEEEEEeEcCCCC----------CcchHHHHH
Confidence 77665 48999999973 4432 12499999999999999999999999987321 122345555
Q ss_pred HHHhcCCCCeeeccCCCCeEEcCCC
Q 019221 316 LLSKELPDAQLLEPTPGEPLEIPAP 340 (344)
Q Consensus 316 ~~~~~~~~~~~~~~~~Ge~~~l~~~ 340 (344)
.+++... .+..+..|+++++...
T Consensus 285 e~~~~~~--~~~~a~dg~~~~l~~~ 307 (320)
T 1y44_A 285 EAVDVFP--NSVAAYDFLEVNVPRG 307 (320)
T ss_dssp HHHHHCS--SEEECCTTCEEECCCC
T ss_pred HHHHhCC--CcEeccCCCEEEecch
Confidence 5554333 4678899999999643
No 9
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.88 E-value=1.2e-21 Score=183.33 Aligned_cols=219 Identities=13% Similarity=0.060 Sum_probs=152.9
Q ss_pred eEEEEEe-----------CcEEEEEe----CCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCC
Q 019221 79 FKLTYLE-----------GNSWLWDL----DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSL 143 (344)
Q Consensus 79 ~~it~lG-----------hss~li~~----~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H 143 (344)
|+|++|| +||++|+. ++.+||||| |... . +++..... ++.++|+|||||.|
T Consensus 2 m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~---G~~~--~--------~~l~~~~~-~~~~i~~i~iTH~H 67 (306)
T 2cbn_A 2 MNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDC---GEGT--Q--------HQLLHTAF-NPGKLDKIFISHLH 67 (306)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECC---CTTH--H--------HHHHTSCC-CTTTEEEEECSCCC
T ss_pred eEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEEC---CHHH--H--------HHHHHhCC-CHHHcCEEEEecCC
Confidence 6788888 69999998 889999999 4221 0 11111111 24589999999999
Q ss_pred CCCCChhhHHHhhh------cCCCceEEEccchHHHHhhc---C-------CceEEeCCCceEEeCcccCCcEEEEEeec
Q 019221 144 DDHCHLKTLKPLSK------MSPNLKVIATPNAKTLLDPL---F-------QNVTYVEPGQSSEIEGRNGSKLRVKATAG 207 (344)
Q Consensus 144 ~DHld~~tl~~L~~------~~p~~~v~~~~~~~~~l~~~---~-------~~i~~l~~~~~~~~~~~~~~~~~i~~~p~ 207 (344)
+||+ .++..|.. +.+++++|+++....+++.. . .+++++++++.++++ +++|+++|.
T Consensus 68 ~DH~--~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~v~~~~~ 140 (306)
T 2cbn_A 68 GDHL--FGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDG-----LRKVTAYPL 140 (306)
T ss_dssp HHHH--TTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECS-----SEEEEEEEC
T ss_pred chhh--CChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhhccCCCceEEEEEcCCCcEeecC-----CEEEEEEEc
Confidence 9995 44444432 22367899888876665542 1 267889999988886 899999998
Q ss_pred CCcCCCCCCCCCeEEEEeC------------------------------------------------CCceEEEEcCCCC
Q 019221 208 PVLGPPWQRPENGYLVNSS------------------------------------------------QGQLTLYYEPHCV 239 (344)
Q Consensus 208 ~~~g~~~~~~~~g~vi~~~------------------------------------------------~g~~~i~~sGDt~ 239 (344)
.|+.. ..||+++.+ ..+.+|+|+||++
T Consensus 141 ~H~~~-----~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~ 215 (306)
T 2cbn_A 141 EHPLE-----CYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTG 215 (306)
T ss_dssp BSSSC-----CEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCSCB
T ss_pred cCCCC-----ccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCC
Confidence 87532 357887641 0147999999999
Q ss_pred Ccchhhcc-cCccEEEEccccccCCC------cccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHH
Q 019221 240 YNQNFLEK-ERSDIIITPVIKQLLPK------FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVES 312 (344)
Q Consensus 240 ~~~~~~~~-~~~Dl~il~~~g~~~~~------~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~ 312 (344)
+.+.+.+. .++|++++++ .|... ...|++++||+++++.+++|+++++|++.-.. ....++
T Consensus 216 ~~~~~~~~~~~~D~li~E~--t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~~----------~~~~~~ 283 (306)
T 2cbn_A 216 PCDAALDLAKGVDVMVHEA--TLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD----------DKGCQH 283 (306)
T ss_dssp SCSTHHHHHTTCSEEEEEC--CBCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTCC----------HHHHHH
T ss_pred CHHHHHHHhcCCCEEEEEC--cCChhhHhHHhhcCCCCHHHHHHHHHHcCCcEEEEEeecCCCC----------CCchhH
Confidence 98877665 4899999997 34432 12399999999999999999999999986321 111133
Q ss_pred HHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 313 FKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
+.+.+++... .+..+..|++++|
T Consensus 284 ~~~e~~~~~~--~~~~a~Dg~~~~~ 306 (306)
T 2cbn_A 284 LLRECRSIFP--ATELANDFTVFNV 306 (306)
T ss_dssp HHHHHHTTCS--CEEECCTTCEEEC
T ss_pred HHHHHHHhCC--CcEEcccccEeeC
Confidence 4443333322 4678889998875
No 10
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.84 E-value=4.8e-20 Score=168.89 Aligned_cols=175 Identities=15% Similarity=0.178 Sum_probs=129.1
Q ss_pred eCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcC-CCce
Q 019221 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMS-PNLK 163 (344)
Q Consensus 85 Ghss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~-p~~~ 163 (344)
+++|++|+.++.+||||| |... +. + .+.. .+||+|||||.|+|| +..+..|.... ..++
T Consensus 38 ~~s~~li~~~~~~iLiD~---G~~~-----~~----~---~~~~---~~id~IliTH~H~DH--i~gl~~l~~~~~~~~~ 97 (258)
T 3g1p_A 38 QPCSGVVKFNDAITLIDA---GLHD-----LA----D---RWSP---GSFQQFLLTHYHMDH--VQGLFPLRWGVGDPIP 97 (258)
T ss_dssp CBSEEEEEETTEEEEECC---CCTT-----HH----H---HCCT---TSSCEEECSCCCHHH--HGGGTTTTTCSSSCEE
T ss_pred cCceEEEEECCcEEEEEC---CchH-----HH----h---hcCc---ccCCEEEEccCchhH--hCCHHHHhccCCCCeE
Confidence 468999999999999999 4111 10 1 1112 378999999999999 46666665432 1478
Q ss_pred EEEccchH---HHHhhcC-Cc-eEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCC
Q 019221 164 VIATPNAK---TLLDPLF-QN-VTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHC 238 (344)
Q Consensus 164 v~~~~~~~---~~l~~~~-~~-i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt 238 (344)
+|+++... .+++..+ .+ ..++++|+.++++ +++|+++++.|+. ...||+|+.+ +.+++|+||+
T Consensus 98 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~~~H~~-----~~~g~~i~~~--~~~i~~~GDt 165 (258)
T 3g1p_A 98 VYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQ-----GLQVTPLPLNHSK-----LTFGYLLETA--HSRVAWLSDT 165 (258)
T ss_dssp EEECCCSSCSTTTTTSCTTEEEEEECCTTCCEEET-----TEEEEEEECCSSS-----CCEEEEEECS--SCEEEEECSC
T ss_pred EEeChhhhhHHHHhcCCCccccccccCCCCeEEEC-----CEEEEEEECCCCC-----CceEEEEEeC--CcEEEEECCC
Confidence 88887765 3333222 22 3688999999997 8999999987753 2479999876 4799999999
Q ss_pred CCcch-hhc-c--cCccEEEEccccccCCCc---ccccCHHHHHHHHHHcCCCEEEEeeeCC
Q 019221 239 VYNQN-FLE-K--ERSDIIITPVIKQLLPKF---TLVSGQEDAVKLAKLLHAKFIVPMKNGD 293 (344)
Q Consensus 239 ~~~~~-~~~-~--~~~Dl~il~~~g~~~~~~---~~h~~~eea~~~~~~l~~k~vip~H~~~ 293 (344)
++.+. ..+ . .++|++++++ .|.+.. ..||++++|+++++.+++|+++++|++.
T Consensus 166 ~~~~~~~~~~l~~~~~Dlli~e~--t~~~~~~~~~~H~~~~~a~~~~~~~~~k~lil~H~s~ 225 (258)
T 3g1p_A 166 AGLPEKTLKFLRNNQPQVMVMDC--SHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISH 225 (258)
T ss_dssp SSCCHHHHHHHHHTCCSEEEEEC--CBSSCSSCCSSSCBHHHHHHHHHHHCCSCEEEESCCH
T ss_pred CCCCHHHHHHHHhCCCCEEEEeC--CCCCccccCCCCCCHHHHHHHHHHcCCCEEEEECccC
Confidence 98764 233 2 5999999997 343321 2499999999999999999999999974
No 11
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.84 E-value=1.5e-20 Score=175.61 Aligned_cols=213 Identities=17% Similarity=0.179 Sum_probs=147.4
Q ss_pred CCCceEEEEEe---------------------------CcEEEEEe---CC--cEEEEccccCCCCCCCcccccccCCcc
Q 019221 75 ATDVFKLTYLE---------------------------GNSWLWDL---DG--VKVLVDPILVGNLDFGIPWLFDAGKKF 122 (344)
Q Consensus 75 ~~~~~~it~lG---------------------------hss~li~~---~g--~~ILiDP~~~g~~s~p~~~~~~~~~~~ 122 (344)
..+.|+|++|| ++|++|+. +| .+||||| |... . .+
T Consensus 25 ~~~~m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~---G~~~-----~-----~~ 91 (293)
T 3md7_A 25 PRNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDT---GPDF-----R-----MQ 91 (293)
T ss_dssp CCSEEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECC---CTTH-----H-----HH
T ss_pred CCCcEEEEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEEC---CccH-----H-----HH
Confidence 45678999998 37899996 45 7999999 5221 0 11
Q ss_pred cCCCCCCCCCCccEEEecCCCCCCCC-hhhHHHhh-hcCCCceEEEccchHHHHhhc----C-----------CceEEeC
Q 019221 123 LKSFQLSDLPQVDCLLITQSLDDHCH-LKTLKPLS-KMSPNLKVIATPNAKTLLDPL----F-----------QNVTYVE 185 (344)
Q Consensus 123 ~~~~~~~~lp~iD~VlISH~H~DHld-~~tl~~L~-~~~p~~~v~~~~~~~~~l~~~----~-----------~~i~~l~ 185 (344)
+.. .++.+||+|||||.|+||+. +..+.... .+..++++|+++.....++.. + .++++++
T Consensus 92 l~~---~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 168 (293)
T 3md7_A 92 MID---SGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMHDIA 168 (293)
T ss_dssp HHH---HTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCTTCCCCCCEEEEECC
T ss_pred HHh---cCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhccccccCCCCceEEEEcC
Confidence 111 13358999999999999952 33333221 112378999888776655542 1 1578899
Q ss_pred CCceEEeCcccCCc----EEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCc-chhhcc-cCccEEEEcccc
Q 019221 186 PGQSSEIEGRNGSK----LRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYN-QNFLEK-ERSDIIITPVIK 259 (344)
Q Consensus 186 ~~~~~~~~~~~~~~----~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~-~~~~~~-~~~Dl~il~~~g 259 (344)
++++++++ + ++|++++..|... ...||+|+ +++|+||+++. +.+.+. .++|++++++ .
T Consensus 169 ~g~~~~~g-----~~~~~~~v~~~~~~H~~~----~~~g~~i~------~~~y~gDt~~~~~~~~~~~~~~Dlli~e~-~ 232 (293)
T 3md7_A 169 PETPFSIE-----GAGGAIRFEPFSQVHGDI----ESLGFRIG------SVVYCTDVSAFPEQSLQYIKDADVLIIGA-L 232 (293)
T ss_dssp TTCCEEEC-----CTTCCEEEEEEEEEETTE----EEEEEEET------TEEEECSCSBCCGGGHHHHTTCSEEEEEC-C
T ss_pred CCCcEEEC-----CCCCcEEEEEEEecCCCC----CEEEEEEe------EEEEECCCCCCCHHHHHHhcCCCEEEEeC-c
Confidence 99999997 6 9999998876421 23588875 69999999854 555554 4899999998 4
Q ss_pred ccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEcC
Q 019221 260 QLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEIP 338 (344)
Q Consensus 260 ~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l~ 338 (344)
.+.+. ..|+++++|+++++.+++|+++++|++... ..+.+++ +.. ..+.....|++++|+
T Consensus 233 ~~~~~-~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~-------------~~~~~~~---~~~--~~v~~a~DG~~i~l~ 292 (293)
T 3md7_A 233 QYRPH-PSHFSLGEALEWIEKLSPKRAILTHMHVPL-------------DYETVMR---ETP--HHVEPGYDGLRFEVA 292 (293)
T ss_dssp CSSCB-TTBCCHHHHHHHHHHHCCSEEEEESBCTTC-------------CHHHHHH---HSC--TTEEECCTTCEEEEC
T ss_pred cCCCC-CCCCCHHHHHHHHHHcCCCEEEEECCCCCC-------------CHHHHHh---hcC--CCcEEeeCCcEEEec
Confidence 44433 359999999999999999999999998631 2333322 222 345566799999875
No 12
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.81 E-value=3.9e-19 Score=163.68 Aligned_cols=217 Identities=16% Similarity=0.145 Sum_probs=143.3
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhh---h---
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLS---K--- 157 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~---~--- 157 (344)
.|.++..+.+++..||||| |... ...+ . .+..++|+|||||.|+||+ ..+..|. +
T Consensus 8 ~g~~~~~~~i~~~~iLiD~---G~~~--~~~l-----------~-~~~~~i~~IliTH~H~DH~--~gl~~l~~~~~~~~ 68 (280)
T 2e7y_A 8 KALFSTWIYYSPERILFDA---GEGV--STTL-----------G-SKVYAFKYVFLTHGHVDHI--AGLWGVVNIRNNGM 68 (280)
T ss_dssp ETTTEEEEEEGGGTEEEEE---CTTH--HHHH-----------G-GGGGGCCEEECSCCCHHHH--TTHHHHHHHHHHHS
T ss_pred cCCceEEEEECCcEEEEEC---Ccch--HHHh-----------c-cCccCCCEEEEeCCchhHH--CCHHHHHHHHHHhc
Confidence 4665555555788999999 4221 0111 0 1234789999999999995 5555442 1
Q ss_pred --cCCCceEEEccchHHHHhhc------------C-CceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEE
Q 019221 158 --MSPNLKVIATPNAKTLLDPL------------F-QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYL 222 (344)
Q Consensus 158 --~~p~~~v~~~~~~~~~l~~~------------~-~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~v 222 (344)
+.+++++|+++... .++.. . .+++++++|+++++++..+.+++|+++|+.|+.. ....||+
T Consensus 69 ~~~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~---~~~~g~~ 144 (280)
T 2e7y_A 69 GDREKPLDVFYPEGNR-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSS---EVSFGYH 144 (280)
T ss_dssp GGGCCCEEEEEETTCH-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSS---SCCEEEE
T ss_pred cCCCCCCEEEECccHH-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCC---CceEEEE
Confidence 12358899887765 44431 1 2578899999999861000079999999876521 1146899
Q ss_pred EEeC-----------------------C--------CceEEEEcCCCCCcchhhcc-cCccEEEEccccccCCC---ccc
Q 019221 223 VNSS-----------------------Q--------GQLTLYYEPHCVYNQNFLEK-ERSDIIITPVIKQLLPK---FTL 267 (344)
Q Consensus 223 i~~~-----------------------~--------g~~~i~~sGDt~~~~~~~~~-~~~Dl~il~~~g~~~~~---~~~ 267 (344)
|+.. + .+.+|+|+||+++. +.+. .++|++++++ ....+. -..
T Consensus 145 i~~~~~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~--~~~~~~~~d~li~e~-t~~~~~~~~~~~ 221 (280)
T 2e7y_A 145 IFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL--DPEEIRGTELLIHEC-TFLDARDRRYKN 221 (280)
T ss_dssp EEEEEEEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC--CHHHHTTCSCEEEEC-CBC--------C
T ss_pred EEEcccccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH--HHHhhcCCCEEEEeC-CcCChhhHHhcC
Confidence 8641 0 14699999999987 3333 4899999997 322221 124
Q ss_pred ccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 268 VSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 268 h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
|+++++++++++.+++++++++|++.... . ..+.+.+.+++...++++.++.+|++++|
T Consensus 222 H~t~~~a~~~~~~~~~~~lvl~H~~~~~~----------~-~~~~~~~~~~~~~~~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 222 HAAIDEVMESVKAAGVKKVILYHISTRYI----------R-QLKSVIKKYREEMPDVEILYMDPRKVFEM 280 (280)
T ss_dssp CCBHHHHHHHHHHHTCCEEEEESCCGGGH----------H-HHHHHHHHHHHHCTTSEEEECCTTSCEEC
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCcCc----------c-hHHHHHHHHHHhCCCceEEEeCCCceeeC
Confidence 99999999999999999999999986220 1 23444444444444678999999999875
No 13
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.74 E-value=1.3e-17 Score=157.92 Aligned_cols=220 Identities=16% Similarity=0.134 Sum_probs=148.0
Q ss_pred eCcEEEEEeCCcE-EEEccccCCCCCCCcccccccCCcccCCCCC---CCCCCccEEEecCCCCCCCChhhHHHhhhcCC
Q 019221 85 EGNSWLWDLDGVK-VLVDPILVGNLDFGIPWLFDAGKKFLKSFQL---SDLPQVDCLLITQSLDDHCHLKTLKPLSKMSP 160 (344)
Q Consensus 85 Ghss~li~~~g~~-ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~---~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p 160 (344)
+++|++|+.+|.+ ||||+ |... . ..+ .+...+.. -++.+||+|||||.|+|| +..+..|.+..
T Consensus 40 ~~ss~li~~~~~~~iLiD~---G~~~-~-~~l-----~~~~~l~~~~~~~~~~i~~i~lTH~H~DH--~~gl~~l~~~~- 106 (321)
T 3jxp_A 40 TQSSIALSDDGVHWILCNA---SPDI-R-AQL-----QAFAPMQPARALRDTGINAIVLLDSQIDH--TTGLLSLREGC- 106 (321)
T ss_dssp CBCEEEEESSSSSEEEECC---CTTH-H-HHH-----HTCGGGCCCSSSSCCSEEEEECSCCCHHH--HGGGGGGGGGC-
T ss_pred cceEEEEEeCCceEEEEeC---CchH-H-HHH-----HhcccccccccCCcccCCEEEECCCChhh--hhhHHHHHhcC-
Confidence 5789999999886 99999 5321 0 001 00000000 134589999999999999 57777776553
Q ss_pred CceEEEccchHHHHhhc----------C--CceEEeCCCceEEe---CcccCCcEEEEEeecCCcCCCC--C------CC
Q 019221 161 NLKVIATPNAKTLLDPL----------F--QNVTYVEPGQSSEI---EGRNGSKLRVKATAGPVLGPPW--Q------RP 217 (344)
Q Consensus 161 ~~~v~~~~~~~~~l~~~----------~--~~i~~l~~~~~~~~---~~~~~~~~~i~~~p~~~~g~~~--~------~~ 217 (344)
++++|+++.....++.. . .++++++.++++++ + +++|++++..|.-+.+ + ..
T Consensus 107 ~~~vy~~~~~~~~l~~~~~~f~~~~~~~~~i~~~~i~~g~~~~i~~~~-----~~~V~~~~v~H~~~~~~~H~~~~~~~~ 181 (321)
T 3jxp_A 107 PHQVWCTDMVHQDLTTGFPLFNMLSHWNGGLQWNRIELEGSFVIDACP-----NLKFTPFPLRSAAPPYSPHRFDPHPGD 181 (321)
T ss_dssp CEEEEECHHHHHHTTTTSCHHHHHTTTTTCEEEEECCSSSCEECTTST-----TEEEEEEEECCCCCTTCTTTTSCCTTS
T ss_pred CCeEEECHHHHHHHHhhCccccccccccCceeEEEcCCCCeEEeccCC-----CeEEEEEEecCCccccccccccccCCC
Confidence 78999988877766531 1 24678888999998 6 8999999886431100 1 13
Q ss_pred CCeEEEE--eCCCceEEEEcCCCCCc-chhhcc-cCccEEEEccccccCC-------------CcccccCHH---HHHHH
Q 019221 218 ENGYLVN--SSQGQLTLYYEPHCVYN-QNFLEK-ERSDIIITPVIKQLLP-------------KFTLVSGQE---DAVKL 277 (344)
Q Consensus 218 ~~g~vi~--~~~g~~~i~~sGDt~~~-~~~~~~-~~~Dl~il~~~g~~~~-------------~~~~h~~~e---ea~~~ 277 (344)
..||+|+ .+ +.+|+|+||+++. +.+.+. .++|++++++ ..+.. .-..|++.+ ||+++
T Consensus 182 ~~Gy~i~~~~~--g~~i~y~~Dt~~~~~~~~~~~~~~D~li~ea-t~~~d~e~~~~glk~r~~~~~gH~s~~~~~eA~~~ 258 (321)
T 3jxp_A 182 NLGLMVEDTRT--GGKLFYAPGLGQVDEKLLAMMHGADCLLVDG-TLWEDDEMQRRGVGTRTGREMGHLAQNGPGGTLEV 258 (321)
T ss_dssp EEEEEEEETTT--CCEEEEESSCCCCCHHHHHHHHHCSEEEEEC-CCSSTTHHHHHTSCSCCCC-CCCCCSSSTTCHHHH
T ss_pred cEEEEEEecCC--CcEEEEECCCCCCCHHHHHHhcCCCEEEEeC-CCCCcHHHhhccccccccCCCcccCCCCHHHHHHH
Confidence 5699998 44 5899999999865 444443 4799999997 22221 111388777 99999
Q ss_pred HHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEcC
Q 019221 278 AKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEIP 338 (344)
Q Consensus 278 ~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l~ 338 (344)
++.+++|+++++|++.-.. .+ +...++.+++... .+.....|.++++-
T Consensus 259 a~~~~~k~lvLtH~s~~np------~l--~~~~~e~~~~~~~-----~v~~A~DGm~i~~~ 306 (321)
T 3jxp_A 259 LDGFPRQRKVLIHINNTNP------IL--DENSPERAEVLRR-----GVEVAFDGMSIELL 306 (321)
T ss_dssp HTTCSSSEEEEESBCTTCG------GG--STTCHHHHHHHHT-----TEEECCTTCEEEEC
T ss_pred HHhCCCCeEEEEEeCCCCc------cc--ccchHHHHHhhcC-----CcEEecCCcEEEeh
Confidence 9999999999999985331 01 3334455555422 24445589988874
No 14
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.71 E-value=1.2e-17 Score=171.75 Aligned_cols=252 Identities=14% Similarity=0.097 Sum_probs=158.0
Q ss_pred CCCCCCCccchhhhccccCCCCcCCCceeCCCCCCCCCC-Ccc--cccCCC-CCCcCCcccccccccc---CCCceEEEE
Q 019221 11 PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIH-PTA--FNFPTR-RFSKVVSALVSEENAV---ATDVFKLTY 83 (344)
Q Consensus 11 ~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~-~~~--~~~~~~-~p~~~~p~~~~~~~~~---~~~~~~it~ 83 (344)
.||+. +.+++++.+ +++|..+.|+.|.-+ ... ... +++... .....++.+..+.... ..+.|+|++
T Consensus 112 ~~g~~--~~~~~~i~~---~~~~~~~~~~~p~~~--~~~~~~i~~~l~~~~~~~~~~l~~i~~~i~~~~~~~~~~m~i~~ 184 (636)
T 2ycb_A 112 VIGKY--GSTSREIVK---NTGWAPKILRTPPIS--SEIIERIRRTLRKNSKERKKILQQLGNRIHQKPKYDNDWARLTA 184 (636)
T ss_dssp HHCTT--SHHHHHHHH---HHCCEEEEEECCSSC--CHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCSSCCCCCEEEE
T ss_pred ccccc--chhHHHHhh---ccCCccceeecCCcc--hhHHHHHHHHHHhhhHHHHHHHHHhhhccccccCCCCCeEEEEE
Confidence 68877 789999999 999999999854321 101 111 222211 0112333332322221 346799999
Q ss_pred Ee------CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCC--CCCCCCccEEEecCCCCCCCChhhHHHh
Q 019221 84 LE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ--LSDLPQVDCLLITQSLDDHCHLKTLKPL 155 (344)
Q Consensus 84 lG------hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~--~~~lp~iD~VlISH~H~DHld~~tl~~L 155 (344)
+| +||++|+.++.+|||||.++.... . + ...++.+. -.+..+||+|||||.|+|| .+.+..|
T Consensus 185 LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~-----~--~-~~~~~~l~~l~~~~~~Id~VlLTH~H~DH--iGglp~L 254 (636)
T 2ycb_A 185 MGGFREVGRSCLYLQTPNSRVLLDCGVNVAGG-----D--D-KNSYPYLNVPEFTLDSLDAVIITHAHLDH--SGFLPYL 254 (636)
T ss_dssp EESSSSSSCCEEEEECSSCEEEEEECCCCSSC-----C--H-HHHSCCTTSTTCCTTTCCEEECSSSSHHH--HTTHHHH
T ss_pred EecCCCCCCCEEEEEECCeEEEEeCCCCcccc-----c--c-hhhccccccccCCcccCcEEEECCCChHH--hcCHHHH
Confidence 96 789999999999999996542110 0 0 01111111 1245689999999999999 5788888
Q ss_pred hhcCCCceEEEccchHHHHhhc----------------C---------CceEEeCCCceEEe-CcccCCcEEEEEeecCC
Q 019221 156 SKMSPNLKVIATPNAKTLLDPL----------------F---------QNVTYVEPGQSSEI-EGRNGSKLRVKATAGPV 209 (344)
Q Consensus 156 ~~~~p~~~v~~~~~~~~~l~~~----------------~---------~~i~~l~~~~~~~~-~~~~~~~~~i~~~p~~~ 209 (344)
.+...++++|+++....+++.. + .++.++++++.+++ + +++|++.++.|
T Consensus 255 ~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~g-----gi~v~~~~~gH 329 (636)
T 2ycb_A 255 YHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAP-----DIRLTLHNAGH 329 (636)
T ss_dssp HHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEET-----TEEEEEEECCS
T ss_pred HhcCCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecC-----CeEEEEeCCCC
Confidence 7622378999998876533210 1 14688999999999 5 89998876554
Q ss_pred cCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcch--hh----cccCccEEEEccccccCCCccccc----CHHHHHHHHH
Q 019221 210 LGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN--FL----EKERSDIIITPVIKQLLPKFTLVS----GQEDAVKLAK 279 (344)
Q Consensus 210 ~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~--~~----~~~~~Dl~il~~~g~~~~~~~~h~----~~eea~~~~~ 279 (344)
.. ..++|.|+.+++..+|+|+||+++... +. ...++|+++++++ |......|. ..++..+.++
T Consensus 330 ~~-----Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT--~~~~~~~h~s~~~~~~~l~~~i~ 402 (636)
T 2ycb_A 330 IL-----GSAMAHLHIGDGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLVMEST--YGGHEDVQPSRNRAEKELVKTIY 402 (636)
T ss_dssp ST-----TCEEEEEEETTTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECT--TCSGGGCCCCHHHHHHHHHHHHH
T ss_pred CC-----CcEEEEEEECCCeEEEEEECCCCCCcccccCCcccCCCCCeEEEECCC--CCCCCCCCCCHHHHHHHHHHHHH
Confidence 31 136888988741128999999988653 22 1348999999863 322111122 2334444444
Q ss_pred H---cCCCEEEEeee
Q 019221 280 L---LHAKFIVPMKN 291 (344)
Q Consensus 280 ~---l~~k~vip~H~ 291 (344)
. .+.+.++|+|-
T Consensus 403 ~~~~~~g~vlIp~fa 417 (636)
T 2ycb_A 403 STLRRGGKILIPVFA 417 (636)
T ss_dssp HHHHHTCCEEEECCT
T ss_pred HHHHcCCEEEEEECC
Confidence 4 58999999984
No 15
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.66 E-value=9.2e-16 Score=150.80 Aligned_cols=185 Identities=16% Similarity=0.103 Sum_probs=125.9
Q ss_pred eEEEEEeC------cEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhH
Q 019221 79 FKLTYLEG------NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTL 152 (344)
Q Consensus 79 ~~it~lGh------ss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl 152 (344)
|+|+++|. ||++|+.++.+|||||.+. +.... .+.+..+. .+..+||+|||||.|.|| .+.+
T Consensus 1 M~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~-----~~~~~----~~~~~~~~-~~~~~Id~VllTH~H~DH--~ggl 68 (431)
T 3iek_A 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMF-----QGKEE----ARNHAPFG-FDPKEVDAVLLTHAHLDH--VGRL 68 (431)
T ss_dssp CEEEECSCSSSSSCCCEEEEETTEEEEECCCCC-----CGGGG----GGGGSCCS-SCGGGCCEEECSCCCHHH--HTTH
T ss_pred CEEEEeCCCCCCCCcEEEEEECCeEEEEeCCCC-----cchhh----ccchhhcC-CCcccCCEEEECCCChHH--hccH
Confidence 68899986 8999999999999999442 11100 01111121 133479999999999999 5888
Q ss_pred HHhhhcCCCceEEEccchHHHHhhc--------C-------------CceEEeCCCceEEeCcccCCcEEEEEeecCCcC
Q 019221 153 KPLSKMSPNLKVIATPNAKTLLDPL--------F-------------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLG 211 (344)
Q Consensus 153 ~~L~~~~p~~~v~~~~~~~~~l~~~--------~-------------~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g 211 (344)
..|.+...+.++|+++....+++.+ . .++..+++++.++++ +++|+++++-|..
T Consensus 69 p~l~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~-----g~~v~~~~agH~~ 143 (431)
T 3iek_A 69 PKLFREGYRGPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLG-----ALSLAFGQAGHLP 143 (431)
T ss_dssp HHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEET-----TEEEEEEECCSST
T ss_pred HHHHHcCCCCeEEEcHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeC-----CEEEEEEeCCCCc
Confidence 8887754478999998876644321 0 358899999999997 8999998765531
Q ss_pred CCCCCCCCeEEEEeCCCceEEEEcCCCCCcchhh-----cccCccEEEEccccccCCCcccccC----HHHHHHHH---H
Q 019221 212 PPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFL-----EKERSDIIITPVIKQLLPKFTLVSG----QEDAVKLA---K 279 (344)
Q Consensus 212 ~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~-----~~~~~Dl~il~~~g~~~~~~~~h~~----~eea~~~~---~ 279 (344)
..++|.|+.+ +.+|+|+||+++..... ...++|++++++. |... .|-+ .++..+++ .
T Consensus 144 -----Gs~~~~i~~~--~~~ilfsGD~~~~~~~~l~~~~~~~~~D~LI~EsT--y~~~--~h~~~~~~~~~l~~~i~~~~ 212 (431)
T 3iek_A 144 -----GSAFVVAQGE--GRTLVYSGDLGNREKDVLPDPSLPPLADLVLAEGT--YGDR--PHRPYRETVREFLEILEKTL 212 (431)
T ss_dssp -----TCEEEEEEET--TEEEEECCCCCCTTSSSSCCCCBCCCCSEEEEECT--TTTC--CCCCHHHHHHHHHHHHHHHH
T ss_pred -----CceEEEEEEC--CEEEEEeCCCCCCCCcccCCccccCCccEEEEEcc--cCCc--CCCChHHHHHHHHHHHHHHH
Confidence 2368889876 47999999999865432 1248999999973 3221 1222 22223333 3
Q ss_pred HcCCCEEEEeee
Q 019221 280 LLHAKFIVPMKN 291 (344)
Q Consensus 280 ~l~~k~vip~H~ 291 (344)
+.+.+.+||++-
T Consensus 213 ~~gg~vlIp~fa 224 (431)
T 3iek_A 213 SQGGKVLIPTFA 224 (431)
T ss_dssp HTTCEEEEECCT
T ss_pred HcCCeEEEEecc
Confidence 447788888863
No 16
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.63 E-value=2.2e-14 Score=140.58 Aligned_cols=198 Identities=12% Similarity=0.141 Sum_probs=130.1
Q ss_pred CceEEEEEe------CcEEEEEeCCcEEEEccccCCCCCC--Cccc---ccccCCcccCCC--------------CCCCC
Q 019221 77 DVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDF--GIPW---LFDAGKKFLKSF--------------QLSDL 131 (344)
Q Consensus 77 ~~~~it~lG------hss~li~~~g~~ILiDP~~~g~~s~--p~~~---~~~~~~~~~~~~--------------~~~~l 131 (344)
+.|+|+++| .||++|+.++..|||||..+..... |... +. + ...++.+ ...+.
T Consensus 5 ~~m~i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~~~~p~~~~~~~~ 82 (429)
T 2az4_A 5 AKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLI-N-NRLVPELKDLYDPRLGYEYHGAEDKD 82 (429)
T ss_dssp CCEEEEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHH-H-TTSSCCCSSCBCGGGCCCCCSSCCCC
T ss_pred CceEEEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhcc-C-CcccCCchhhhcccccccchhhhhcc
Confidence 458999997 5899999999999999955321100 0000 00 0 0001111 01344
Q ss_pred CCccEEEecCCCCCCCChhhHHHhhhcCCCceEEEccchHHHHhhc-----------------CCceEEeCCCceEEeCc
Q 019221 132 PQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL-----------------FQNVTYVEPGQSSEIEG 194 (344)
Q Consensus 132 p~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v~~~~~~~~~l~~~-----------------~~~i~~l~~~~~~~~~~ 194 (344)
.+||+|||||.|.|| ++.+..|.+ ++++|+++.....++.. ..++++++.++.++++
T Consensus 83 ~~i~~v~lTH~H~DH--iggl~~l~~---~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g- 156 (429)
T 2az4_A 83 YQHTAVFLSHAHLDH--SRMINYLDP---AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVG- 156 (429)
T ss_dssp CSEEEEECSCSCHHH--HTTGGGBCT---TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEET-
T ss_pred ccCCEEEECCchHHH--hCcHhHhcC---CCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEEC-
Confidence 589999999999999 577777765 68999998876654331 1357889999999997
Q ss_pred ccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcc-------hhhcc-cCccEEEEccccccCCC--
Q 019221 195 RNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ-------NFLEK-ERSDIIITPVIKQLLPK-- 264 (344)
Q Consensus 195 ~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~-------~~~~~-~~~Dl~il~~~g~~~~~-- 264 (344)
+++|+++++.|+.+ ...||+|+.++ .+++|+||+.+.. .+.+. .++|++++++.....+.
T Consensus 157 ----~~~v~~~~~~H~~~----gs~~~~i~~~~--~~i~~tGD~~~~~~~~~~~~~~~~~~~~~d~Li~Est~~~~~~~~ 226 (429)
T 2az4_A 157 ----EISVEIVPVDHDAY----GASALLIRTPD--HFITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPERE 226 (429)
T ss_dssp ----TEEEEEEECCCSST----TCEEEEEEETT--EEEEECCSCCSSSTTHHHHHHHHHHHTTCSEEEEECCGGGSCCCC
T ss_pred ----CEEEEEEECCCCCh----hhEEEEEEeCC--cEEEECCCcccCCCchHHHHHHHHhccCCCEEEECCCCcCccccc
Confidence 89999998776422 24689999874 6999999997642 23333 38999999974222110
Q ss_pred ----cccccCHHHHHHHHHHc---CCCEEEEeeeC
Q 019221 265 ----FTLVSGQEDAVKLAKLL---HAKFIVPMKNG 292 (344)
Q Consensus 265 ----~~~h~~~eea~~~~~~l---~~k~vip~H~~ 292 (344)
...|++.+++.+.+.++ .+++++.+|..
T Consensus 227 ~~~~~~~~~s~~~~~~~i~~~~~~~~~rlil~h~~ 261 (429)
T 2az4_A 227 PDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGY 261 (429)
T ss_dssp CCTTBCCCCSHHHHHHHHHHHHHTCSSSCEEEEEC
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 11277777776665543 35656666654
No 17
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.62 E-value=1.6e-14 Score=142.96 Aligned_cols=188 Identities=15% Similarity=0.174 Sum_probs=121.4
Q ss_pred CCceEEEEEe------CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCCh
Q 019221 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHL 149 (344)
Q Consensus 76 ~~~~~it~lG------hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~ 149 (344)
.+.|+|+++| .||++|+.++.+|||||.+..... .. +.++.+...+..+||+|||||.|.|| .
T Consensus 9 ~~~m~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~----~~-----~~~~~l~~~~~~~Id~VllTH~H~DH--~ 77 (459)
T 2i7t_A 9 SDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLE----GM-----DALPYIDLIDPAEIDLLLISHFHLDH--C 77 (459)
T ss_dssp CEEEEEEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSC----GG-----GGSCCGGGSCGGGCCEEECCCSSHHH--H
T ss_pred CCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcc----cc-----cccCcccccCcccCcEEEECCCChhh--h
Confidence 4568999998 699999999999999995531110 00 11111111234489999999999999 5
Q ss_pred hhHHHhhhcC-CCceEEEccchHHH----Hhhc---------------------CCceEEeCCCceEEeCcccCCcEEEE
Q 019221 150 KTLKPLSKMS-PNLKVIATPNAKTL----LDPL---------------------FQNVTYVEPGQSSEIEGRNGSKLRVK 203 (344)
Q Consensus 150 ~tl~~L~~~~-p~~~v~~~~~~~~~----l~~~---------------------~~~i~~l~~~~~~~~~~~~~~~~~i~ 203 (344)
+.+..|..+. .+.++|+++..... +... ..++..++++++++++ +++|+
T Consensus 78 ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----gi~v~ 152 (459)
T 2i7t_A 78 GALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVA-----GIKFW 152 (459)
T ss_dssp TTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEET-----TEEEE
T ss_pred hhhHHHHHhcCCCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEEC-----CEEEE
Confidence 7788876543 15789988766442 2110 1367889999999997 89998
Q ss_pred EeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcchhhc----c--cCccEEEEccccccCCCcccccCHHHH---
Q 019221 204 ATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLE----K--ERSDIIITPVIKQLLPKFTLVSGQEDA--- 274 (344)
Q Consensus 204 ~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~----~--~~~Dl~il~~~g~~~~~~~~h~~~eea--- 274 (344)
+.++-|+. ..++|.|+.+ +.+|+|+||+++...... . .++|++++++ .|... .|...++.
T Consensus 153 ~~~~GH~~-----Gs~~~~i~~~--~~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Es--ty~~~--~~~~~~~~~~~ 221 (459)
T 2i7t_A 153 CYHAGHVL-----GAAMFMIEIA--GVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIES--TYGTH--IHEKREEREAR 221 (459)
T ss_dssp EEECCSST-----TCEEEEEEET--TEEEEECCSCCCC-----CCCCCCSSCCSEEEEEC--TTTTC--CCCCHHHHHHH
T ss_pred EEeCCCcc-----CcEEEEEEEC--CcEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECC--CCCCC--CCCChHHHHHH
Confidence 86554431 2368889887 479999999998765332 1 3899999986 34321 23343332
Q ss_pred ----HHHHHHcCCCEEEEee
Q 019221 275 ----VKLAKLLHAKFIVPMK 290 (344)
Q Consensus 275 ----~~~~~~l~~k~vip~H 290 (344)
++.....+.+.+||+-
T Consensus 222 l~~~i~~~~~~~g~vlip~f 241 (459)
T 2i7t_A 222 FCNTVHDIVNRGGRGLIPVF 241 (459)
T ss_dssp HHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEec
Confidence 2222234566677773
No 18
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.62 E-value=6.3e-15 Score=151.57 Aligned_cols=251 Identities=11% Similarity=0.088 Sum_probs=151.2
Q ss_pred CCCCCCCccchhhhccccCCCCcCCCceeCCCCCCCCCCCcc--cccCCC-CCCcCCcccccccc---ccCCCceEEEEE
Q 019221 11 PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIHPTA--FNFPTR-RFSKVVSALVSEEN---AVATDVFKLTYL 84 (344)
Q Consensus 11 ~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~~~~--~~~~~~-~p~~~~p~~~~~~~---~~~~~~~~it~l 84 (344)
.||+. +++++++.+ +++|..+.|+-|.-.. .+-... +++... .....++.+..+.. ....+.|+|+++
T Consensus 116 ~~g~~--~~~~~~i~~---~~~~~~~~~~~p~~~~-~~~~~i~~~l~~~~~~~~~~l~~i~~~i~~~~~~~~~~m~I~~L 189 (640)
T 2xr1_A 116 VIGKH--GATLREITK---QIGWIPKVVRTPPIKS-RTVKNIREFMRNNLKERKEILKTVGRKIHRECTSKDQWVRVTAL 189 (640)
T ss_dssp HHCSS--SHHHHHHHH---HHCSEEEEEECCSSCC-HHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCCSCCCCEEEEE
T ss_pred ccccc--hhhHHHHHh---ccCcccccccCCCcch-hHHHHHHHHHHHhHHHHHHHHHHHhhhccCcccCCCCceEEEEE
Confidence 68887 789999988 8999999888332110 000111 222211 00012222212111 123467999999
Q ss_pred e------CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCC---CCCCCCccEEEecCCCCCCCChhhHHHh
Q 019221 85 E------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ---LSDLPQVDCLLITQSLDDHCHLKTLKPL 155 (344)
Q Consensus 85 G------hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~---~~~lp~iD~VlISH~H~DHld~~tl~~L 155 (344)
| +||++|+.++.+|||||.++... + ...++.+. .++..+||+|||||.|.|| .+.+..|
T Consensus 190 G~~~evg~s~~LI~~~~~~ILID~G~~~~~---------~-~~~l~~l~~~~~~~~~~Id~VllTH~H~DH--iGgl~~L 257 (640)
T 2xr1_A 190 GGCKEVGRSCFLLSTPESRILIDCGVNVGS---------D-ENMTPYLYVPEVFPLNQIDAVIVTHAHLDH--QGLVPLL 257 (640)
T ss_dssp ECSSSSBCCEEEEECSSCEEEECCCCBCSS---------C-SSCCCCTTSTTTCSGGGCCEEECCSSCHHH--HTTHHHH
T ss_pred ecCCCCCCcEEEEEECCeEEEEeCCCCccc---------c-ccccccccccccCCcccCcEEEECCCChhh--hccHHHH
Confidence 8 89999999999999999554211 0 01112121 1145589999999999999 5788888
Q ss_pred hhcCCCceEEEccchHHHHhhc----------------C---------CceEEeCCCceEEe-CcccCCcEEEEEeecCC
Q 019221 156 SKMSPNLKVIATPNAKTLLDPL----------------F---------QNVTYVEPGQSSEI-EGRNGSKLRVKATAGPV 209 (344)
Q Consensus 156 ~~~~p~~~v~~~~~~~~~l~~~----------------~---------~~i~~l~~~~~~~~-~~~~~~~~~i~~~p~~~ 209 (344)
.+...++++|+++....+++.. + .+++.+++++.+++ + +++|++.++.|
T Consensus 258 ~~~~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~g-----g~~v~~~~~GH 332 (640)
T 2xr1_A 258 FKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAP-----DIKLTFHNAGH 332 (640)
T ss_dssp HHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEET-----TEEEEEEECSS
T ss_pred HhcCCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecC-----CEEEEEEcCCC
Confidence 7622378999998775533210 1 14788999999999 6 78888776544
Q ss_pred cCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcch-hhc-----ccCccEEEEccccccCCCcccccCH----HHHHHHHH
Q 019221 210 LGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN-FLE-----KERSDIIITPVIKQLLPKFTLVSGQ----EDAVKLAK 279 (344)
Q Consensus 210 ~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~-~~~-----~~~~Dl~il~~~g~~~~~~~~h~~~----eea~~~~~ 279 (344)
.. ..++|.++.+++..+|+|+||+++... +.. ..++|++++++. |...-..|.+. ++..+.++
T Consensus 333 ~~-----Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT--~g~~~~~h~s~~~~~~~l~~~i~ 405 (640)
T 2xr1_A 333 IL-----GSAISHFHIGDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEAT--YGNANAFQPALKDAEKHLQMVVK 405 (640)
T ss_dssp ST-----TCEEEEEEETTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECT--TCSTTCCCCCHHHHHHHHHHHC-
T ss_pred Cc-----CcEEEEEEECCceEEEEEECCCCCCCccccccccccCCCCcEEEECCC--CCCCccCCCCHHHHHHHHHHHHH
Confidence 21 236888988742129999999988643 221 248999999863 22111012222 23333333
Q ss_pred H---cCCCEEEEeee
Q 019221 280 L---LHAKFIVPMKN 291 (344)
Q Consensus 280 ~---l~~k~vip~H~ 291 (344)
. .+.+.++|+|.
T Consensus 406 ~~~~~~g~vlIp~fa 420 (640)
T 2xr1_A 406 NTIERGGIAVIPAFA 420 (640)
T ss_dssp -------CEEEECCT
T ss_pred HHHhcCCeEEEEecc
Confidence 2 46788999885
No 19
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.58 E-value=2.9e-15 Score=154.41 Aligned_cols=218 Identities=14% Similarity=0.088 Sum_probs=138.7
Q ss_pred CCCCCCCccchhhhccccCCCCcCCCceeCCCCCCCCCC-Ccc--cccCCC----CCCcCCcccccccc---ccCCCceE
Q 019221 11 PFSCLPSRRSRTRTTDIILSALSKTPRFTSACRSSVPIH-PTA--FNFPTR----RFSKVVSALVSEEN---AVATDVFK 80 (344)
Q Consensus 11 ~~g~~~~~~~~~~~~~~~~s~~~~~~~f~n~~~~~~~~~-~~~--~~~~~~----~p~~~~p~~~~~~~---~~~~~~~~ 80 (344)
.||+. +++++++.+ +++|..+.|+-|.-. ... ... +++... .+... +..+.. ....+.|+
T Consensus 121 ~~g~~--~~~~~~i~~---~~~~~~~~~~~p~~~--~~~~~~i~~~l~~~~~~~~~~l~~---~~~~i~~~~~~~~~~m~ 190 (651)
T 3af5_A 121 VIGKN--GETLRLITQ---KVKWAPKVVRTPPLQ--SQTIYSIRQILQTESKDRRKFLRQ---VGRNIYRKPEYKSRWIR 190 (651)
T ss_dssp TSCTT--SHHHHHHHH---HHCSEEEEEECCSSC--CHHHHHHHHHHHHCHHHHHHHHHH---HHHHHTSSSCCCCSCEE
T ss_pred ccccc--chhHHHHhh---ccCcccccccCCCCC--chHHHHHHHHHHhhHHHHHHHHHH---hccceecCCcCCCCceE
Confidence 78887 789999988 899999988833211 100 111 222210 11111 111111 12346799
Q ss_pred EEEEe------CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCC--C--CC--CCccEEEecCCCCCCCC
Q 019221 81 LTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQL--S--DL--PQVDCLLITQSLDDHCH 148 (344)
Q Consensus 81 it~lG------hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~--~--~l--p~iD~VlISH~H~DHld 148 (344)
|+++| +||++|+.++.+|||||.++... ... + ...++.+.. . +. .+||+|||||.|.||
T Consensus 191 i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~----~~~--g-~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DH-- 261 (651)
T 3af5_A 191 ITGLGGFREVGRSALLVQTDESFVLVDFGVNVAM----LND--P-YKAFPHFDAPEFQYVLREGLLDAIIITHAHLDH-- 261 (651)
T ss_dssp EEEEECSSSSSCCEEEEEESSCEEEECCCCCGGG----TTC--H-HHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHH--
T ss_pred EEEEecCCCCCCcEEEEEECCcEEEEeCCCChhc----ccc--c-hhhcccccchhhccCcccCCCCEEEECCCChHh--
Confidence 99997 78999999999999999553110 000 0 011122210 1 23 579999999999999
Q ss_pred hhhHHHhhhcC-CCceEEEccchHHHHhhc----------------C---------CceEEeCCCceEEe-CcccCCcEE
Q 019221 149 LKTLKPLSKMS-PNLKVIATPNAKTLLDPL----------------F---------QNVTYVEPGQSSEI-EGRNGSKLR 201 (344)
Q Consensus 149 ~~tl~~L~~~~-p~~~v~~~~~~~~~l~~~----------------~---------~~i~~l~~~~~~~~-~~~~~~~~~ 201 (344)
.+.+..|.+.. .++++|+++.+..+++.. + .+++++++++.+++ + +++
T Consensus 262 iGglp~L~~~~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~g-----gi~ 336 (651)
T 3af5_A 262 CGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISP-----DIR 336 (651)
T ss_dssp HTTHHHHHHTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEET-----TEE
T ss_pred hcCHHHHHhcCCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecC-----CEE
Confidence 57788877531 168999998876533210 1 14788999999999 6 899
Q ss_pred EEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcch-hhc-----ccCccEEEEcc
Q 019221 202 VKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN-FLE-----KERSDIIITPV 257 (344)
Q Consensus 202 i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~-~~~-----~~~~Dl~il~~ 257 (344)
|++.++.|.. ..++|.|+.+++..+|+|+||+++... +.. ..++|++++++
T Consensus 337 v~~~~~gH~~-----Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~Es 393 (651)
T 3af5_A 337 LTLHNAGHIL-----GSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMES 393 (651)
T ss_dssp EEEEECSSST-----TCEEEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEEC
T ss_pred EEEecCCCCc-----CcEEEEEEECCCceEEEEeCCCCCCcccccccccccCCCCCEEEECC
Confidence 9887755531 236888988741128999999988753 222 34899999997
No 20
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.58 E-value=5e-14 Score=142.52 Aligned_cols=193 Identities=16% Similarity=0.161 Sum_probs=127.8
Q ss_pred CCceEEEEEe------CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCC--CCCCCCccEEEecCCCCCCC
Q 019221 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ--LSDLPQVDCLLITQSLDDHC 147 (344)
Q Consensus 76 ~~~~~it~lG------hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~--~~~lp~iD~VlISH~H~DHl 147 (344)
.+.++++.+| .||++|+.++..|||||.++-... ... +....++.+. .++..+||+|||||.|.||
T Consensus 6 ~~~i~i~~lGg~~eiG~n~~li~~~~~~iLID~G~~~~~~---~~~--g~d~iip~~~~l~~~~~~Id~I~lTH~H~DH- 79 (555)
T 3zq4_A 6 NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPED---ELL--GIDYVIPDYTYLVKNEDKIKGLFITHGHEDH- 79 (555)
T ss_dssp CCSEEEEEEESBSSSSCCEEEEEETTEEEEEEECCBCCCT---TST--TCSEEEECCHHHHTTTTTEEEEEESCCCHHH-
T ss_pred CCcEEEEEcCCCCccCCEEEEEEECCeEEEEeCCCCCCcc---ccc--cccccccCHHHHhcCccCCCEEEECCCchhh-
Confidence 4578899987 489999999999999995431110 000 0000011110 1234589999999999999
Q ss_pred ChhhHHHhhhcCCCceEEEccchHHHHhhc--------CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCC
Q 019221 148 HLKTLKPLSKMSPNLKVIATPNAKTLLDPL--------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPEN 219 (344)
Q Consensus 148 d~~tl~~L~~~~p~~~v~~~~~~~~~l~~~--------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~ 219 (344)
++.+..|.+++ ++++|+++....+++.. ..++++++++++++++ +++|+++++.|+.+ ...
T Consensus 80 -iggl~~l~~~~-~~pIy~t~~t~~ll~~~l~~~~~~~~~~~~~v~~g~~~~ig-----~~~v~~~~~~H~~p----gs~ 148 (555)
T 3zq4_A 80 -IGGIPYLLRQV-NIPVYGGKLAIGLLRNKLEEHGLLRQTKLNIIGEDDIVKFR-----KTAVSFFRTTHSIP----DSY 148 (555)
T ss_dssp -HTTHHHHHTTC-CCCEEECHHHHHHHHHHHHHHSTTTTCCEEECCTTCCEEET-----TEEEEEEEEBCSSS----SEE
T ss_pred -hCCHHHHHHhc-CceEEECHHHHHHHHHHHHHcCccCCCceEEeCCCCEEEEC-----CEEEEEEeCCCCCc----CcE
Confidence 68888888776 78999999887655432 1468899999999997 89998888775322 236
Q ss_pred eEEEEeCCCceEEEEcCCCCCcch-------h---hcc--cCccEEEEccccccCCCcccccCHHHHHHHHHH----cCC
Q 019221 220 GYLVNSSQGQLTLYYEPHCVYNQN-------F---LEK--ERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKL----LHA 283 (344)
Q Consensus 220 g~vi~~~~g~~~i~~sGDt~~~~~-------~---~~~--~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~----l~~ 283 (344)
+|+|++++ .+++|+||+.+... + .+. .++|+++++.+.+..+.... +.++..+.+.+ .+.
T Consensus 149 ~~~i~~~~--~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~~~~--se~~v~~~i~~~~~~~~g 224 (555)
T 3zq4_A 149 GIVVKTPP--GNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPEFTM--SERRVGESIHDIFRKVDG 224 (555)
T ss_dssp EEEEEETT--EEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCSCCC--CHHHHHHHHHHHHHHCCS
T ss_pred EEEEEECC--cEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCCCCC--CHHHHHHHHHHHHHhCCC
Confidence 89999884 69999999987532 1 222 27899999974333333222 33444433333 355
Q ss_pred CEEEEe
Q 019221 284 KFIVPM 289 (344)
Q Consensus 284 k~vip~ 289 (344)
+.++|+
T Consensus 225 rvii~~ 230 (555)
T 3zq4_A 225 RIIFAT 230 (555)
T ss_dssp CEEEEC
T ss_pred EEEEEE
Confidence 666654
No 21
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.56 E-value=3.4e-15 Score=138.33 Aligned_cols=177 Identities=14% Similarity=0.126 Sum_probs=114.0
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC--CCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCC
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPN 161 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~ 161 (344)
.|+|||+|+.++..|||||.+.. . ...+. ..+. ++++ .+||+|+|||.|+|| .+.+..|.++. +
T Consensus 53 ~~~n~~li~~~~~~iLID~G~~~--~--~~~~~----~~l~~~g~~~---~~i~~ii~TH~H~DH--~gg~~~l~~~~-~ 118 (294)
T 3m8t_A 53 DGIAVYVIKTSQGLILMDTAMPQ--S--TGMIK----DNIAKLGFKV---ADIKLILNTHAHLDH--TGGFAEIKKET-G 118 (294)
T ss_dssp SSSCCEEEEETTEEEEECCCCGG--G--HHHHH----HHHHHTTCCG---GGEEEEECSCCCHHH--HTTHHHHHHHH-C
T ss_pred CCeEEEEEEECCceEEEECCCch--h--HHHHH----HHHHHcCCCH---HHCcEEEECCCCccc--cccHHHHhhcc-C
Confidence 46799999999999999994421 1 01110 1111 1221 268999999999999 67888887663 7
Q ss_pred ceEEEccchHHHHhhc---C------------CceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeC
Q 019221 162 LKVIATPNAKTLLDPL---F------------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSS 226 (344)
Q Consensus 162 ~~v~~~~~~~~~l~~~---~------------~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~ 226 (344)
+++|+++....+++.. + .....+..++.+.++ +..+++..+|++..| ..+|.++..
T Consensus 119 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~i~~~~~pgHt~g------~~~~~~~~~ 189 (294)
T 3m8t_A 119 AQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLG---DTTLTAHATPGHSPG------CTSWEMTVK 189 (294)
T ss_dssp CEEEEEGGGHHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEEEEE
T ss_pred CEEEEChHHHHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeC---CEEEEEEeCCCCCcc------CEEEEEEcc
Confidence 9999999887766543 1 234678889999997 222444455654322 368888754
Q ss_pred CC--ceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCccC
Q 019221 227 QG--QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDS 296 (344)
Q Consensus 227 ~g--~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~ 296 (344)
++ ..+++|+||+.+...... +....+.. .....++++.++.++++.++|.|.+.+..
T Consensus 190 ~~~~~~~~lf~GD~~~~~~~~~-----------~~~~~~~~--~~~~~~sl~~l~~l~~~~v~pgHg~~~~~ 248 (294)
T 3m8t_A 190 DGKEDREVLFFCSGTVALNRLV-----------GQPTYAGI--VDDYRATFAKAKAMKIDVLLGPHPEVYGM 248 (294)
T ss_dssp ETTEEEEEEECCCCCCTTCCCS-----------SSCSSTTH--HHHHHHHHHHHHHSCCSEEECSSGGGTTH
T ss_pred CCCccceEEEEcCccCCCCcCc-----------CCCCCCch--HHHHHHHHHHHHCCCCCEEEcCCCChhch
Confidence 21 127999999975422110 01111111 11346778888899999999999998875
No 22
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.53 E-value=7.4e-14 Score=141.59 Aligned_cols=165 Identities=12% Similarity=0.114 Sum_probs=113.6
Q ss_pred CCceEEEEEe------CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCC--CCCCCCccEEEecCCCCCCC
Q 019221 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ--LSDLPQVDCLLITQSLDDHC 147 (344)
Q Consensus 76 ~~~~~it~lG------hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~--~~~lp~iD~VlISH~H~DHl 147 (344)
.+.|+|+.|| .||++|+.++..|||||.++-... ... +....++.+. ..+..+||+|||||.|.||
T Consensus 14 ~~~~~i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~---~~~--g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DH- 87 (562)
T 3bk2_A 14 QDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEE---GMP--GVDLLIPRVDYLIEHRHKIKAWVLTHGHEDH- 87 (562)
T ss_dssp CCCEEEEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCT---TST--TCCEEEECCHHHHHTGGGEEEEECCCCCHHH-
T ss_pred CCcEEEEEecCCCCcCCCEEEEEECCeEEEEECCCCCCcc---ccc--cccccccchhhhhcCcccCcEEEECCCChHH-
Confidence 4568899998 689999999999999995421110 000 0000011110 0123479999999999999
Q ss_pred ChhhHHHhhhcCC----CceEEEccchHHHHhhc---------CCceEEeCCCceEEeCcccCCc-EEEEEeecCCcCCC
Q 019221 148 HLKTLKPLSKMSP----NLKVIATPNAKTLLDPL---------FQNVTYVEPGQSSEIEGRNGSK-LRVKATAGPVLGPP 213 (344)
Q Consensus 148 d~~tl~~L~~~~p----~~~v~~~~~~~~~l~~~---------~~~i~~l~~~~~~~~~~~~~~~-~~i~~~p~~~~g~~ 213 (344)
.+.+..|.+.++ ++++|+++....+++.. ..+++++++++.++++ + ++|+++++.|+.+
T Consensus 88 -iggl~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~~~~~~~~~~~~~v~~g~~~~lg-----~~~~v~~~~~~H~~~- 160 (562)
T 3bk2_A 88 -IGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVG-----RYFTLDLFRMTHSIP- 160 (562)
T ss_dssp -HTTHHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEET-----TTEEEEEEECCCSSS-
T ss_pred -hCCHHHHHHhhccccCCceEEeCHHHHHHHHHHHHHcCCCcCCceEEEECCCCEEEeC-----CCEEEEEEECCCCCc-
Confidence 577887776543 68999998887655432 2367889999999997 6 9999998876422
Q ss_pred CCCCCCeEEEEeCCCceEEEEcCCCCCcc--------h---hhcc--cCccEEEEccc
Q 019221 214 WQRPENGYLVNSSQGQLTLYYEPHCVYNQ--------N---FLEK--ERSDIIITPVI 258 (344)
Q Consensus 214 ~~~~~~g~vi~~~~g~~~i~~sGDt~~~~--------~---~~~~--~~~Dl~il~~~ 258 (344)
...+|.|++++ .+|+|+||+.+.. . +.+. .++|+++++..
T Consensus 161 ---gs~~~~i~~~~--~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT 213 (562)
T 3bk2_A 161 ---DNSGVVIRTPI--GTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADAT 213 (562)
T ss_dssp ---SCEEEEEEETT--EEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECT
T ss_pred ---ccEEEEEEECC--eEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEeccc
Confidence 24689999874 6999999996532 1 2222 37999999864
No 23
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.52 E-value=1.5e-14 Score=134.27 Aligned_cols=180 Identities=15% Similarity=0.148 Sum_probs=111.2
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC--CCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCC
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPN 161 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~ 161 (344)
.|+||++|+.++..|||||.+..... .+. ..+. ++.. .+||+|++||.|+|| ++.+..|.+++ +
T Consensus 56 ~~~~~~li~~~~~~iLiD~G~~~~~~----~~~----~~l~~~g~~~---~~i~~ii~TH~H~DH--~gg~~~l~~~~-~ 121 (303)
T 4ax1_B 56 CGISALLVTSDAGHILVDAATPQAGP----QIL----ANIRALGFRP---EDVRAIVFSHEHFDH--AGSLAELQKAT-G 121 (303)
T ss_dssp SSSCCEEECCTTCEEEECCBSTTCHH----HHH----HHHHHTTCCG---GGEEEEECSCSSHHH--HTTHHHHHHHH-C
T ss_pred CCceEEEEEeCCcEEEEECCCcccHH----HHH----HHHHHcCCCH---HHCcEEEcCCCCccc--cCCHHHHHhhc-C
Confidence 35899999999999999995431111 110 1111 1222 258999999999999 67888887764 7
Q ss_pred ceEEEccchHHHHhhc-----------------CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEE
Q 019221 162 LKVIATPNAKTLLDPL-----------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVN 224 (344)
Q Consensus 162 ~~v~~~~~~~~~l~~~-----------------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~ 224 (344)
+++|+++....+++.. ....+.++.++++.++ +..+++..+|++..| ..+|.++
T Consensus 122 ~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~v~~~~~pgHt~g------~~~~~~~ 192 (303)
T 4ax1_B 122 APVYARAPAIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVG---PLALTAVASPGHTPG------GTSWTWR 192 (303)
T ss_dssp CCEEEEHHHHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEEE
T ss_pred CEEEEcHHHHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEEC---CeEEEEEeCCCCCcc------ceEEEEE
Confidence 8999998877766543 1346889999999997 223444455654222 2567775
Q ss_pred eCCCc--eEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCccC
Q 019221 225 SSQGQ--LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDS 296 (344)
Q Consensus 225 ~~~g~--~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~ 296 (344)
..+.. ..+++ ||+.+.... +..+ ++.++.| +.. -+...++++.++.++++.++|.|.+.+..
T Consensus 193 ~~~~~~~~~~l~-gD~l~~~~~---~~~~---~~~~~~~-~~~--~~~~~~sl~~l~~l~~~~vv~~Hg~~~~~ 256 (303)
T 4ax1_B 193 SCEGDDCRQMVY-ADSLTAISD---DVFR---YSDDAAH-PGY--LAAFRNTLARVAALDCDILVTPHPSASGL 256 (303)
T ss_dssp EEETTEEEEEEE-CCCCCCCCC---SSCC---TTCGGGS-TTH--HHHHHHHHHHHHTSCCSEEECSSGGGGTG
T ss_pred ecCCCceeEEEE-eCCccccCc---Cccc---CCCCCCC-ccH--HHHHHHHHHHHhcCCCCEEEcCCcchhhH
Confidence 43211 14555 888653211 0000 1100101 011 12456778888899999999999998774
No 24
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.50 E-value=8.2e-14 Score=144.68 Aligned_cols=187 Identities=16% Similarity=0.139 Sum_probs=116.0
Q ss_pred eCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcC-----
Q 019221 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMS----- 159 (344)
Q Consensus 85 Ghss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~----- 159 (344)
|.||+||+.++.+|||||.+..... .++-. ...+. +..++||+|||||.|.|| ++.+..|.+++
T Consensus 14 ~~n~~LIe~~~~~ILID~G~~~~~~-~~~~~-------l~~L~-~~~~~IdaVlLTH~H~DH--iGgLp~L~~~~~~g~~ 82 (717)
T 2i7x_A 14 TTVGSVVRFDNVTLLIDPGWNPSKV-SYEQC-------IKYWE-KVIPEIDVIILSQPTIEC--LGAHSLLYYNFTSHFI 82 (717)
T ss_dssp SCCCEEEEETTEEEEECCCCCTTTS-CHHHH-------HHHHH-TTGGGCCEEECCCSSHHH--HTTHHHHHHHSHHHHH
T ss_pred CCCEEEEEECCeEEEEeCCCCcccc-hhhhH-------HHHHH-hcCCCCCEEEECCCChHH--HCCHHHHHHhhhhccc
Confidence 4689999999999999996542100 00100 00010 112489999999999999 57777776542
Q ss_pred CCceEEEccchHHH----Hhh----c-------------------CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCC
Q 019221 160 PNLKVIATPNAKTL----LDP----L-------------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGP 212 (344)
Q Consensus 160 p~~~v~~~~~~~~~----l~~----~-------------------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~ 212 (344)
.+++||+++....+ +.. + ..+++.+++++.+.+.+. +++++|+++++.|+.
T Consensus 83 ~~~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~-~ggi~V~~~~aGHs~- 160 (717)
T 2i7x_A 83 SRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSR-YDGLTLLAYNAGVCP- 160 (717)
T ss_dssp HTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTT-TTTEEEEEEECSSST-
T ss_pred CCceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeec-CCCEEEEEECCCCCC-
Confidence 26899998876442 211 0 125788999999999100 028999887665541
Q ss_pred CCCCCCCeEEEEeCCCceEEEEcCCCCCcch-------h--------hcccCccEEEEccccccCCC-cccccCHHHHHH
Q 019221 213 PWQRPENGYLVNSSQGQLTLYYEPHCVYNQN-------F--------LEKERSDIIITPVIKQLLPK-FTLVSGQEDAVK 276 (344)
Q Consensus 213 ~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~-------~--------~~~~~~Dl~il~~~g~~~~~-~~~h~~~eea~~ 276 (344)
..++|.|+.++ .+|+|+||+++... + ....++|++|+++. |... ...+...++..+
T Consensus 161 ----Gs~~~~I~~~~--~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsT--y~~~~h~~~~~~~~l~~ 232 (717)
T 2i7x_A 161 ----GGSIWCISTYS--EKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLD--RFGSSQPFKKRSKIFKD 232 (717)
T ss_dssp ----TCEEEEEECSS--CEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCS--CCCCSSCHHHHHHHHHH
T ss_pred ----CcEEEEEEeCC--CEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCC--CCCCCCCCHHHHHHHHH
Confidence 13689998874 69999999876432 1 22358999999973 3221 111111222233
Q ss_pred HHHH---cCCCEEEEeeeC
Q 019221 277 LAKL---LHAKFIVPMKNG 292 (344)
Q Consensus 277 ~~~~---l~~k~vip~H~~ 292 (344)
.+.. .+.+.+||++..
T Consensus 233 ~i~~~l~~~G~VlIp~fa~ 251 (717)
T 2i7x_A 233 TLKKGLSSDGSVIIPVDMS 251 (717)
T ss_dssp HHHHHTSTTCEEEEEECTT
T ss_pred HHHHHHhCCCeEEEEeccc
Confidence 3333 367899999864
No 25
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.47 E-value=2.1e-13 Score=131.22 Aligned_cols=177 Identities=11% Similarity=0.100 Sum_probs=120.8
Q ss_pred EEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCceEEEccc
Q 019221 90 LWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPN 169 (344)
Q Consensus 90 li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v~~~~~ 169 (344)
++.++|..|+||++-. .++++||+|||||.|.||+ +.+. +.+ ++++|+++.
T Consensus 31 ~~~~pG~~ilVD~f~~-----------------------~~~~~IdaI~lTH~H~DHi--ggl~---~~~-~~pIy~s~~ 81 (367)
T 4b87_A 31 YKKIPGTGFTVDAFQY-----------------------GVVEGCTAYFLTHFHSDHY--AGLS---KHF-TFPVYCSEI 81 (367)
T ss_dssp GGBCTTSSEEESCCSS-----------------------SSCTTCCEEECCCCCHHHH--TTCS---TTC-CSCEEECHH
T ss_pred EEEECCCeEEEeCCCc-----------------------CCccCCcEEEECcChHHHh--CCcc---ccc-CCcEEECHH
Confidence 3346788899998210 1345899999999999994 5554 233 789999998
Q ss_pred hHHHHhhc-C---CceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcchhh
Q 019221 170 AKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFL 245 (344)
Q Consensus 170 ~~~~l~~~-~---~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~ 245 (344)
+...++.. . .++..+++++.++++ +++|+++++.|.. ...+|+|++++ +.+|+|+||+++.....
T Consensus 82 t~~ll~~~l~~~~~~~~~l~~g~~~~ig-----~~~v~~~~agH~~-----gs~~~~i~~~~-g~~il~tGD~~~~~~~~ 150 (367)
T 4b87_A 82 TGNLLKNKLHVQEQYIHPLPLDTECIVN-----GVKVVLLDANHCP-----GAVMILFYLPN-GTVILHTGDFRADPSME 150 (367)
T ss_dssp HHHHHHHHSCCCGGGEEECCBTSCEEET-----TEEEEEEECSSST-----TCEEEEEECTT-SCEEEECCSCCCCGGGG
T ss_pred HHHHHHHHhccccceEEEeCCCCEEEEC-----CEEEEEEeCCCcC-----CcEEEEEEcCC-CcEEEEecCcccCcccc
Confidence 88866654 2 368899999999997 8999998876631 23689998765 46899999999887553
Q ss_pred c--c--cCccEEEEccccccCCCcccccCHHHHHH-----HHHHc--CCCEEEEeeeCCccCcccccccccccCCHHHHH
Q 019221 246 E--K--ERSDIIITPVIKQLLPKFTLVSGQEDAVK-----LAKLL--HAKFIVPMKNGDLDSKGFLASIIQSEGTVESFK 314 (344)
Q Consensus 246 ~--~--~~~Dl~il~~~g~~~~~~~~h~~~eea~~-----~~~~l--~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~ 314 (344)
. . .++|++++++. -..+.+ .|.+.+++.+ +.+.+ +++.+ ++.++|.+ +..+.+.
T Consensus 151 ~~~l~~~~~D~Li~EsT-y~~~~~-~~ps~~~~~~~~~~~i~~~~~~~g~~~--v~~~a~~i-----------gr~q~ll 215 (367)
T 4b87_A 151 RSLLADQKVHMLYLDTT-YCSPEY-TFPSQQEVIRFAINTAFEAVTLNPHAL--VVCGTYSI-----------GKEKVFL 215 (367)
T ss_dssp GSGGGTSCCCEEEECCT-TCSTTC-CCCCHHHHHHHHHHHHHHHHHHCTTEE--EEEEESSS-----------CCHHHHH
T ss_pred hhhhccCCCCEEEEecc-cCCCCC-CCCCHHHHHHHHHHHHHHHHHhCCCeE--EEEccchh-----------HHHHHHH
Confidence 2 2 38999999973 223332 2556666655 33333 56654 34566653 3346666
Q ss_pred HHHHhcC
Q 019221 315 ELLSKEL 321 (344)
Q Consensus 315 ~~~~~~~ 321 (344)
+++++.+
T Consensus 216 ~ia~~~g 222 (367)
T 4b87_A 216 AIADVLG 222 (367)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 6666543
No 26
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.47 E-value=7.1e-14 Score=128.04 Aligned_cols=180 Identities=14% Similarity=0.218 Sum_probs=112.1
Q ss_pred cEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCceEEE
Q 019221 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIA 166 (344)
Q Consensus 87 ss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v~~ 166 (344)
|||+|+. +..+||||..+ .. ..-+. +.+..+ -+..+||+|++||.|.|| .+++..|.+++|++++++
T Consensus 44 N~yli~~-~~~iLID~G~~---~~-~~~~~----~~l~~~--~~~~~i~~IilTH~H~DH--~gg~~~l~~~~~~~~v~~ 110 (262)
T 3hnn_A 44 NSYVIEG-DKTAIIDPPVE---SF-MKIYL----EALQQT--VNLKKLDYVILGHFSPNR--IPTFKALLELAPQITFVC 110 (262)
T ss_dssp EEEEEES-SSEEEECCCCH---HH-HHHHH----HHHHHH--SCGGGEEEEECSSCCGGG--HHHHHHHHHHCTTCEEEE
T ss_pred EEEEEEC-CCEEEEECCCc---ch-HHHHH----HHHHHh--CChhhCCEEEECCCCcch--hchHHHHHHHCCCCEEEE
Confidence 6899997 78999999332 10 00000 011111 122379999999999999 689999998888999999
Q ss_pred ccchHHHHhhc----CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcc
Q 019221 167 TPNAKTLLDPL----FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ 242 (344)
Q Consensus 167 ~~~~~~~l~~~----~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~ 242 (344)
++.....++.. ..++..++.|+++++++ +..+++..+|+.|+ ..++++..++ .+++|+||+ +..
T Consensus 111 ~~~~~~~l~~~~~~~~~~~~~~~~g~~l~lg~--~~~~~~i~tpg~Ht-------~g~~~~~~~~--~~~lfsGD~-~~~ 178 (262)
T 3hnn_A 111 SLPAAGDLRAAFPDDNLNILPMRGKETLDLGK--GHVLKFLPIPSPRW-------PAGLCTYDVQ--TQILYTDKI-FGA 178 (262)
T ss_dssp CHHHHHHHHHHSSSSCCEEEECCSSCEEECST--TCEEEEEECCCSSC-------TTCEEEEETT--TTEEEEETT-TCC
T ss_pred CHHHHHHHHHHhCCCCCceEEeCCCCEEEcCC--CcEEEEEECCCCCC-------CCeeEEEeCC--CCEEEEeec-Ccc
Confidence 99888777654 24678899999999950 12377777777332 1344444442 489999998 322
Q ss_pred hhhcccCccEEEEccccccCC---Cc------ccccCHHHHHHHHHHcCCCEEEEeeeCCcc
Q 019221 243 NFLEKERSDIIITPVIKQLLP---KF------TLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (344)
Q Consensus 243 ~~~~~~~~Dl~il~~~g~~~~---~~------~~h~~~eea~~~~~~l~~k~vip~H~~~f~ 295 (344)
.... +-++-+-.+.+.+ .+ .......++++.++.++++.++|.|...+.
T Consensus 179 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~L~~~~i~PgHG~~~~ 236 (262)
T 3hnn_A 179 HICG----DDVFDDNWESFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPLVR 236 (262)
T ss_dssp CCCC----SCCEESCGGGTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSSSEES
T ss_pred ccCc----hhcccccHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhCCCCCEEECCCCcccc
Confidence 1111 1011100011111 00 001244677888888899999999987653
No 27
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.42 E-value=3.7e-13 Score=119.25 Aligned_cols=169 Identities=15% Similarity=0.086 Sum_probs=107.1
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
++.||++|+.++..|||||..+.... . +....+....-.+||+|++||.|.||+ +.+..|.+. +++
T Consensus 29 ~~~n~~li~~~~~~iLiD~G~~~~~~---~-------~~~~~l~~~~~~~i~~ii~TH~H~DH~--gg~~~l~~~--~~~ 94 (219)
T 3l6n_A 29 YSANSMYLVTKKGVVLFDVPWEKVQY---Q-------SLMDTIKKRHNLPVVAVFATHSHDDRA--GDLSFFNNK--GIK 94 (219)
T ss_dssp EEEEEEEEEETTEEEEESCCSSGGGH---H-------HHHHHHHHHHSCCEEEEECSSSSTTTT--CCTHHHHHT--TCE
T ss_pred ccceEEEEEeCCEEEEEeCCCChHHH---H-------HHHHHHHHhcCCceeEEEecCCCcccc--cCHHHHHhC--CCE
Confidence 45799999999999999994421110 0 000111100003789999999999995 667777653 789
Q ss_pred EEEccchHHHHhhcC--CceEEeCCCceEEeCcccCCcEEEEEe---ecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCC
Q 019221 164 VIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKAT---AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHC 238 (344)
Q Consensus 164 v~~~~~~~~~l~~~~--~~i~~l~~~~~~~~~~~~~~~~~i~~~---p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt 238 (344)
+|+++.....+++.+ .....++.++++.++ +++|+++ |++..+ ..++.+. + .+++|+||+
T Consensus 95 v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~g------~~~~~~~--~--~~~lf~GD~ 159 (219)
T 3l6n_A 95 TYATAKTNEFLKKDGKATSTEIIKTGKPYRIG-----GEEFVVDFLGEGHTAD------NVVVWFP--K--YNVLDGGCL 159 (219)
T ss_dssp EEECHHHHHHHHHTTCCCCSEECCTTSEEEET-----TEEEEEECCCCSSSSS------CCEEEET--T--TTEEEEETT
T ss_pred EEEcHHHHHHHHhcCCCCCcEecCCCCEEEEC-----CEEEEEEeCCCCCCCC------CEEEEEC--C--CCEEEECCe
Confidence 999988887776653 456788899999997 6666654 444222 2455553 2 479999998
Q ss_pred CCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc--CCCEEEEeeeCCc
Q 019221 239 VYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDL 294 (344)
Q Consensus 239 ~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l--~~k~vip~H~~~f 294 (344)
.+.. +..++..++. + . .....++++.+..+ ..+.++|.|....
T Consensus 160 ~~~~-----~~~~~~~~~~-~------~-~~~~~~sl~~l~~~~~~~~~v~pgHg~~~ 204 (219)
T 3l6n_A 160 VKSN-----SATDLGYIKE-A------N-VEQWPKTINKLKAKYSKATLIIPGHDEWK 204 (219)
T ss_dssp SCCT-----TCSSCCCCTT-C------C-TTTHHHHHHHHHHHCTTCSEEEESBSCCT
T ss_pred eecc-----ccccccccCc-c------C-HHHHHHHHHHHHHhCCCCCEEECCCCCCC
Confidence 7632 1222211121 1 1 11346667766664 6799999998754
No 28
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.40 E-value=7.2e-13 Score=122.26 Aligned_cols=183 Identities=10% Similarity=0.052 Sum_probs=112.1
Q ss_pred EEEEeCcEEEEEeCCcEEEEccccCCCCCCCccc---cc-ccCCc---ccCCCCCCCCCCccEEEecCCCCCCCChhhHH
Q 019221 81 LTYLEGNSWLWDLDGVKVLVDPILVGNLDFGIPW---LF-DAGKK---FLKSFQLSDLPQVDCLLITQSLDDHCHLKTLK 153 (344)
Q Consensus 81 it~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~---~~-~~~~~---~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~ 153 (344)
-..++.+||+|+.++..|||||..+.... ..++ +. ....+ .+..... +..+||+|||||.|.|| .+.+.
T Consensus 43 ~~~~~~n~~lI~~~~~~iLID~G~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~Id~IllTH~H~DH--igg~~ 118 (280)
T 3esh_A 43 QINLPTHPILIQTAQYNLIIDAGIGNGKL-SEKQLRNFGVDEESHIIADLANYNL-TPKDIDYVLMTHMHFDH--AAGLT 118 (280)
T ss_dssp EEEEECCCEEEECSSCEEESCCTTCSSCS-CHHHHHHTTCSSCCCHHHHHHTTTC-CTTSCCEEECSCCCHHH--HGGGS
T ss_pred eEEEeEEEEEEEECCEEEEEECCCCCccc-ccccccccCCcccchHHHHHHHcCC-CHHHCCEEEeCCCcccc--cCccc
Confidence 36789999999999999999996542110 0000 00 00000 0111111 12278999999999999 67887
Q ss_pred Hhhh--cCCCceEEEccchHHHHhhc----------------CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCC
Q 019221 154 PLSK--MSPNLKVIATPNAKTLLDPL----------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQ 215 (344)
Q Consensus 154 ~L~~--~~p~~~v~~~~~~~~~l~~~----------------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~ 215 (344)
.|.+ .+|++++|+++....++... ..++..++.+ .++. .++++..+|++..|
T Consensus 119 ~l~~~~~fp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~----~gi~~~~~pGHt~g---- 188 (280)
T 3esh_A 119 DQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKH--FEPV----PGIKMQHSGGHSFG---- 188 (280)
T ss_dssp CTTSCCSSTTCEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSE--ECSS----TTEEEEECCSSSTT----
T ss_pred ccccccCCCCCEEEECHHHHHHhhCcccccccchhhhhhhhhhheEEEeCCC--CeEc----CCEEEEEcCCCCcc----
Confidence 7776 56789999998876654321 0123444332 2333 36888888886433
Q ss_pred CCCCeEEEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHH----Hc--CCCEEEEe
Q 019221 216 RPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAK----LL--HAKFIVPM 289 (344)
Q Consensus 216 ~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~----~l--~~k~vip~ 289 (344)
.++|+++.+ +.+++|+||+.+.... +.+|+. + .+ .++++++.+..+ .+ ....++|.
T Consensus 189 --~~~~~i~~~--~~~vlftGD~~~~~~~---~~~d~~-----~----~~--d~d~~~~~~s~~~ll~~~~~~~~~v~pg 250 (280)
T 3esh_A 189 --HTIITIESQ--GDKAVHMGDIFPTTAH---KNPLWV-----T----AY--DDYPMQSIREKERMIPYFIQQQYWFLFY 250 (280)
T ss_dssp --CEEEEEEET--TEEEEECGGGSCSGGG---CSTTCC-----C----TT--CSCHHHHHHHHHHHHHHHHHTTCEEECS
T ss_pred --cEEEEEEEC--CcEEEEEEccCCchhh---cCCCcc-----c----cc--cCCHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 368889876 4799999999876532 222221 1 11 236666654432 22 56789999
Q ss_pred eeCCcc
Q 019221 290 KNGDLD 295 (344)
Q Consensus 290 H~~~f~ 295 (344)
|.....
T Consensus 251 H~~~~~ 256 (280)
T 3esh_A 251 HDENYF 256 (280)
T ss_dssp SCSSEE
T ss_pred ccCCCc
Confidence 998765
No 29
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.39 E-value=3.5e-12 Score=116.92 Aligned_cols=144 Identities=14% Similarity=0.137 Sum_probs=92.9
Q ss_pred EEEEEeCcEEEEEeCCcEEEEccccCCCCCC-Cccccc-----ccC----Cc----ccC--CCCCCCCCCccEEEecCCC
Q 019221 80 KLTYLEGNSWLWDLDGVKVLVDPILVGNLDF-GIPWLF-----DAG----KK----FLK--SFQLSDLPQVDCLLITQSL 143 (344)
Q Consensus 80 ~it~lGhss~li~~~g~~ILiDP~~~g~~s~-p~~~~~-----~~~----~~----~~~--~~~~~~lp~iD~VlISH~H 143 (344)
.-..++.+||||+.++..|||||..+..... +..|-. ..+ .. .+. ++++ .+||+|+|||.|
T Consensus 37 ~~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~i~~VilTH~H 113 (276)
T 2r2d_A 37 RLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSP---DDISTVVLSHLH 113 (276)
T ss_dssp CEEEEEEEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCG---GGCSEEECSCCS
T ss_pred ceEEeeeEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCH---HHCCEEEecCcc
Confidence 3457788999999999999999965432100 000100 000 00 011 1222 268999999999
Q ss_pred CCCCChhhHHHhhhcCCCceEEEccchHHHHhhc---------------------CCceEEeC-CCceEEeCcccCCcEE
Q 019221 144 DDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL---------------------FQNVTYVE-PGQSSEIEGRNGSKLR 201 (344)
Q Consensus 144 ~DHld~~tl~~L~~~~p~~~v~~~~~~~~~l~~~---------------------~~~i~~l~-~~~~~~~~~~~~~~~~ 201 (344)
+||+ +.+..| +++++|+++.....+... ..++..++ .++.++++ ++++
T Consensus 114 ~DH~--gg~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~----~~~~ 183 (276)
T 2r2d_A 114 NDHA--GCVEYF----GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELA----PGVN 183 (276)
T ss_dssp TTTS--TTGGGC----SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEE----TTEE
T ss_pred cccC--CChhhC----CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEec----CCEE
Confidence 9995 666655 378999988765533210 13456777 47888885 3699
Q ss_pred EEEe-ecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcch
Q 019221 202 VKAT-AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN 243 (344)
Q Consensus 202 i~~~-p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~ 243 (344)
|..+ |++..| ..+|+++.++ +.+++|+||+.+...
T Consensus 184 v~~~~pgHt~g------~~~~~~~~~~-~~~vl~~GD~~~~~~ 219 (276)
T 2r2d_A 184 LLNFGTGHASG------MLGLAVRLEK-QPGFLLVSDACYTAT 219 (276)
T ss_dssp EEEEESSSSSS------EEEEEEECSS-SCEEEEEETTSCCHH
T ss_pred EEeCCCCCCce------eEEEEEEcCC-CceEEEEechhhhHH
Confidence 9999 876432 3688888753 159999999988753
No 30
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.38 E-value=6.5e-13 Score=123.93 Aligned_cols=218 Identities=14% Similarity=0.107 Sum_probs=122.5
Q ss_pred CCceEEEEE-----eCcEEEEEe--CCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCC
Q 019221 76 TDVFKLTYL-----EGNSWLWDL--DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCH 148 (344)
Q Consensus 76 ~~~~~it~l-----Ghss~li~~--~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld 148 (344)
++.|.|..+ |++||+|.. ++..+||||.+.-..... .+......+....+....+ +|++||+||.|.||
T Consensus 2 pg~m~i~~~~~~~~~~~~yli~~~~~~~~ilID~g~~~~~~~~-~~~~~~~~~l~~~l~~~g~-~i~~Il~TH~H~DH-- 77 (298)
T 4efz_A 2 PGSMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSG-RTRTASADQLIARVAALGA-RVRWLLETHVHADH-- 77 (298)
T ss_dssp BCSCEEEEEECTTTCBEEEEEECTTTCEEEEESCCBEEETTTT-EEECHHHHHHHHHHHHHTC-EEEEEECSSCCSSS--
T ss_pred CCceEEEEEecCCcccEEEEEEECCCCeEEEEcCCCCcccccc-ccCcccHHHHHHHHHHCCC-cceEEEECCCchhh--
Confidence 356888776 789999987 567999999653100000 0000000000011111122 58999999999999
Q ss_pred hhhHHHhhhcCCCceEEEccchHHHHhhc----C----------CceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCC
Q 019221 149 LKTLKPLSKMSPNLKVIATPNAKTLLDPL----F----------QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPW 214 (344)
Q Consensus 149 ~~tl~~L~~~~p~~~v~~~~~~~~~l~~~----~----------~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~ 214 (344)
+..+..|.+++ ++++++++.....++.+ + .....+..++++.++ +..+++..+||+..+
T Consensus 78 ~gg~~~l~~~~-~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g---~~~i~vi~tPGHT~g--- 150 (298)
T 4efz_A 78 LSAAPYLKTRV-GGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALG---ALSIRAMHTPGHTPA--- 150 (298)
T ss_dssp BCCHHHHHHHH-CCEEEEETTHHHHHHHHHHHTTCCTTSCSSSTTSSEEECTTCEEEET---TEEEEEEECCSSSTT---
T ss_pred hhhHHHHHHHh-CCcEEEChhHHHHHHHHHHhcCCcccccccccCCCEEeCCCCEEEEC---CEEEEEEECCCCCcc---
Confidence 57888888776 78999988865544322 1 112678889999997 223555566665332
Q ss_pred CCCCCeEEEEeCCC----ceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCC-EEEEe
Q 019221 215 QRPENGYLVNSSQG----QLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAK-FIVPM 289 (344)
Q Consensus 215 ~~~~~g~vi~~~~g----~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k-~vip~ 289 (344)
..+|++...++ +.+++|+||+.+....-. +..|+ +..+. ...-++++.+..+.++ .++|.
T Consensus 151 ---~~~~~~~~~~~~~~~~~~~lftGD~l~~~~~g~-~r~d~----------~~~d~-~~~~~Sl~kl~~L~~~~~v~pg 215 (298)
T 4efz_A 151 ---CMTYVVTEAHAAHDARDAAAFVGDTLFMPDYGT-ARCDF----------PGGDA-RSLYRSIRKVLSLPPATRLYMC 215 (298)
T ss_dssp ---CEEEEEEETTCCGGGCBCEEECCSSBCCTTTCB-CCCCS----------TTCCH-HHHHHHHHHHTTSCTTCEEECS
T ss_pred ---cEEEEECCCcccccCCceEEEEcCccccCCCCC-ccCCC----------CCCCH-HHHHHHHHHHhcCCCCEEEECC
Confidence 36888877521 123999999976532200 01111 00010 0123445555566777 79999
Q ss_pred eeCCc--------cCcc---cccccccccCCHHHHHHHHHh
Q 019221 290 KNGDL--------DSKG---FLASIIQSEGTVESFKELLSK 319 (344)
Q Consensus 290 H~~~f--------~~~~---~~~~~l~~~~~~e~~~~~~~~ 319 (344)
|...- ..-+ ..+..+......++|.+..++
T Consensus 216 Hg~~~~~~~~~~~sti~~e~~~n~~l~~~~~~~~fv~~~~~ 256 (298)
T 4efz_A 216 HDYQPNGRAIQYASTVADELRENVHIREGVTEDDFVAMRTA 256 (298)
T ss_dssp BCSCC---CCCCEEEHHHHHHHCTTTSTTCCHHHHHHHHHH
T ss_pred CCCCccCCCCCCccCHHHHHhhCHhhcCCCCHHHHHHHHHh
Confidence 97321 0000 011223223466888887765
No 31
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.36 E-value=1.6e-12 Score=115.80 Aligned_cols=170 Identities=12% Similarity=0.022 Sum_probs=105.4
Q ss_pred EEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCc
Q 019221 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (344)
Q Consensus 83 ~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~ 162 (344)
+++.+||+|+.++..+||||..+.... .... ..+... . . .+||+|++||.|.||+ +.+..+.+ +++
T Consensus 24 ~~~~n~~li~~~~~~iLiD~G~~~~~~--~~~~-----~~l~~~-~-g-~~i~~vi~TH~H~DH~--gg~~~~~~--~~~ 89 (223)
T 1m2x_A 24 KYAANAVYLVTDKGVVVIDCPWGEDKF--KSFT-----DEIYKK-H-G-KKVIMNIATHSHDDRA--GGLEYFGK--IGA 89 (223)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSGGGH--HHHH-----HHHHHH-H-C-CCEEEEECSSSSTTTT--TTHHHHHH--TTC
T ss_pred cccccEEEEEeCCEEEEEeCCCChhHH--HHHH-----HHHHHH-h-C-CCeEEEEeccCCcccc--CchhhHhh--CCC
Confidence 467899999999999999994421000 0000 001111 0 1 2789999999999995 67777776 379
Q ss_pred eEEEccchHHHHhhcC--CceEEeCCCceEEeCcccCCcEEEEEe---ecCCcCCCCCCCCCeEEEEeCCCceEEEEcCC
Q 019221 163 KVIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKAT---AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPH 237 (344)
Q Consensus 163 ~v~~~~~~~~~l~~~~--~~i~~l~~~~~~~~~~~~~~~~~i~~~---p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGD 237 (344)
++++++.....++... .....++.++++.++ +++|+++ |++..+ ..++.+. + .+++|+||
T Consensus 90 ~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~~------~~~~~~~--~--~~~lf~GD 154 (223)
T 1m2x_A 90 KTYSTKMTDSILAKENKPRAQYTFDNNKSFKVG-----KSEFQVYYPGKGHTAD------NVVVWFP--K--EKVLVGGC 154 (223)
T ss_dssp EEEEEHHHHHHHHHTTCCCCSEEESSCEEEEET-----TEEEEEECCCSSSSSS------CCEEEET--T--TTEEEEET
T ss_pred eEEEcHHHHHHHHhcCccCCceecCCCceEEEC-----CEEEEEEecCCCCCCC------CEEEEEC--C--CCEEEEec
Confidence 9999988877776543 224678889899997 5666554 554322 2466553 2 48999999
Q ss_pred CCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc--CCCEEEEeeeCCc
Q 019221 238 CVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDL 294 (344)
Q Consensus 238 t~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l--~~k~vip~H~~~f 294 (344)
..+.. +.+++..++ .... ....++++.++.+ +.+.++|.|...+
T Consensus 155 ~~~~~-----~~~~~~~~~-------~~~~-~~~~~sl~~l~~~~~~~~~i~pgHg~~~ 200 (223)
T 1m2x_A 155 IIKSA-----DSKDLGYIG-------EAYV-NDWTQSVHNIQQKFSGAQYVVAGHDDWK 200 (223)
T ss_dssp TSCCT-----TCSSCCCCT-------TCCH-HHHHHHHHHHHHHTTTCSEEEESBSCCC
T ss_pred ccccC-----cccccccCC-------CCCH-HHHHHHHHHHHHhCCCCCEEEeCCCCcC
Confidence 76542 111211111 1111 1224556666665 7889999998765
No 32
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.35 E-value=1.3e-12 Score=119.27 Aligned_cols=176 Identities=14% Similarity=0.178 Sum_probs=108.9
Q ss_pred eCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC--CCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCc
Q 019221 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (344)
Q Consensus 85 Ghss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~ 162 (344)
+.+||+|+.++..|||||..+. . ...+. ..+. ++++ .+|++|++||.|.|| .+.+..|.++. ++
T Consensus 24 ~~n~~li~~~~~~iLID~G~~~--~--~~~l~----~~l~~~g~~~---~~i~~IilTH~H~DH--~gg~~~l~~~~-~~ 89 (263)
T 1k07_A 24 DLASYLIVTPRGNILINSDLEA--N--VPMIK----ASIKKLGFKF---SDTKILLISHAHFDH--AAGSELIKQQT-KA 89 (263)
T ss_dssp SBCCEEEEETTEEEEECCCCGG--G--HHHHH----HHHHHTTCCG---GGEEEEECSSSSHHH--HTTHHHHHHHH-CC
T ss_pred CeEEEEEEeCCceEEEECCCcc--c--HHHHH----HHHHHcCCCH---HHCcEEEeCCCCccc--cccHHHHHHhc-CC
Confidence 4689999999999999994321 1 00010 0111 1222 268999999999999 57888887654 78
Q ss_pred eEEEccchHHHHhhc-----------------CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEe
Q 019221 163 KVIATPNAKTLLDPL-----------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNS 225 (344)
Q Consensus 163 ~v~~~~~~~~~l~~~-----------------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~ 225 (344)
++|+++.....++.. ......++.++.+.++ +..+++..+|++..| ..+|+++.
T Consensus 90 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~i~~i~~pGHt~g------~~~~~~~~ 160 (263)
T 1k07_A 90 KYMVMDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELG---GTVLTAHLTPGHTRG------CTTWTMKL 160 (263)
T ss_dssp EEEEEHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEEEE
T ss_pred EEEEcHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEEC---CeEEEEEECCCCCCC------cEEEEEec
Confidence 999988877655431 0234678889999997 123555556665322 36788876
Q ss_pred CCCc--eEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCcc
Q 019221 226 SQGQ--LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (344)
Q Consensus 226 ~~g~--~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~ 295 (344)
.+.+ .+++|+||+++.....-.++ ..+. . .+ ....++++.++.+.++.++|.|...+.
T Consensus 161 ~~~~~~~~~lf~GD~~~~~~~~~~~~---------~~~~-~-~~-~~~~~sl~~l~~l~~~~i~pgHg~~~~ 220 (263)
T 1k07_A 161 KDHGKQYQAVIIGSIGVNPGYKLVDN---------ITYP-K-IA-EDYKHSIKVLESMRCDIFLGSHAGMFD 220 (263)
T ss_dssp EETTEEEEEEEECCCCCCTTCCCSSC---------SSCT-T-HH-HHHHHHHHHHHTBCCSEEEESBHHHHT
T ss_pred ccCCceeEEEEECCcccCCCccccCC---------CcCc-c-cH-HHHHHHHHHHHccCCCEEEcCCCcccc
Confidence 3101 37999999876322100000 0010 0 00 023566777778899999999987664
No 33
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.35 E-value=2.4e-12 Score=124.54 Aligned_cols=184 Identities=16% Similarity=0.145 Sum_probs=109.4
Q ss_pred cEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCC--CCCCccEEEecCCCCCCCChhhHHHhhhcCCCceE
Q 019221 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLS--DLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKV 164 (344)
Q Consensus 87 ss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~--~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v 164 (344)
|||+|+.++..+||||..... ...+. +.+..+ .. +..+||+|++||.|.|| .+.+..|.+++|++++
T Consensus 36 n~~li~~~~~~iLiD~g~~~~----~~~~~----~~l~~~-~~~~~~~~i~~ii~TH~H~DH--~gg~~~l~~~~p~~~v 104 (404)
T 2ohh_A 36 NAYLVCGDEGVALIDNSYPGT----FDELM----ARVEDA-LQQVGMERVDYIIQNHVEKDH--SGVLVELHRRFPEAPI 104 (404)
T ss_dssp CCEEEECSSCEEEECCCCTTC----HHHHH----HHHHHH-HHHHTCCCCCEEECSCCSHHH--HTTHHHHHHHSTTCCE
T ss_pred EEEEEEeCCcEEEEeCCCCcc----HHHHH----HHHHHH-hccCCccCCCEEEeCCCCCcc--cchHHHHHHHCCCCEE
Confidence 799999888899999944211 11110 111111 00 22478999999999999 6888888887778999
Q ss_pred EEccchHHHHhhcC-----CceEEeCCCceEEeCcccCCcEEEEEee-cCCcCCCCCCCCCeEEEEeCCCceEEEEcCCC
Q 019221 165 IATPNAKTLLDPLF-----QNVTYVEPGQSSEIEGRNGSKLRVKATA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHC 238 (344)
Q Consensus 165 ~~~~~~~~~l~~~~-----~~i~~l~~~~~~~~~~~~~~~~~i~~~p-~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt 238 (344)
++++.....++... .++..++.++++.++ +..+++..+| ++..+ ..++.+.. .+++|+||+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~i~~~~~p~gH~~~------~~~~~~~~----~~~lf~GD~ 171 (404)
T 2ohh_A 105 YCTEVAVKGLLKHYPSLREAEFMTVKTGDVLDLG---GKTLTFLETPLLHWPD------SMFTLLDE----DGILFSNDA 171 (404)
T ss_dssp EECHHHHHHHHHHCGGGGGSCEEECCTTCEEECS---SCEEEEEECTTSSSTT------CEEEEEET----TTEEECTTT
T ss_pred EECHHHHHHHHHHhcccccCCceEcCCCCEEEEC---CEEEEEEeCCCCCCCC------ceEEEECC----CcEEEecCc
Confidence 99988777665531 357889999999997 2235555555 44221 24555542 379999998
Q ss_pred CCc--c--h-hhcccCccEEEEccccccCCCc--ccccCHHHHHHHHHHcCC----CEEEEeeeCCcc
Q 019221 239 VYN--Q--N-FLEKERSDIIITPVIKQLLPKF--TLVSGQEDAVKLAKLLHA----KFIVPMKNGDLD 295 (344)
Q Consensus 239 ~~~--~--~-~~~~~~~Dl~il~~~g~~~~~~--~~h~~~eea~~~~~~l~~----k~vip~H~~~f~ 295 (344)
... . . +....+.+..+.+. ..|.... .......++++.++.+.+ ++++|.|...+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~~~~i~pgHg~~~~ 238 (404)
T 2ohh_A 172 FGQHLCCPQRLDREIPEYILMDAA-RKFYANLITPLSKLVLKKFDEVKELGLLERIQMIAPSHGQIWT 238 (404)
T ss_dssp TCCCCCCSCCBGGGSCHHHHHHHH-HHHHHHHTGGGHHHHHHHHHHHHHTTCGGGCSEEECSSSCBBS
T ss_pred cccCcCcccccccccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccEEecCCCcccc
Confidence 631 1 0 10000000000000 0010000 000012567888888998 999999987664
No 34
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.34 E-value=6.6e-12 Score=114.00 Aligned_cols=160 Identities=18% Similarity=0.197 Sum_probs=101.5
Q ss_pred cEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCceEEE
Q 019221 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIA 166 (344)
Q Consensus 87 ss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v~~ 166 (344)
+||+|+.++..|||||..+.. .+ . +.. ..+||+|++||.|.||+ +.+..|.+++ ++++|+
T Consensus 21 ~~~li~~~~~~iLiD~G~~~~----~~--------~---l~~--~~~i~~vi~TH~H~DH~--gg~~~l~~~~-~~~i~~ 80 (261)
T 3adr_A 21 TVYVMCGEKLTVMIDAGVSNS----IA--------D---FSF--LDKLDYIVLTHLHIDHI--GLLPELLQVY-KAKVLV 80 (261)
T ss_dssp EEEEEECSSCEEEECCCCTTC----CC--------C---CTT--CSCCCEEECSCCSGGGT--TTHHHHHHHS-CCEEEE
T ss_pred EEEEEEcCCcEEEEeCCCCCC----hh--------h---cCC--CCCCcEEEECCCCcccc--CCHHHHHHHh-CCeEEE
Confidence 689998778899999943211 11 1 112 34799999999999994 7788888776 789998
Q ss_pred ccchHHHHhh---------------------cC--------CceEEeCCCceEEeCcccCCcEEE--EEeecCCcCCCCC
Q 019221 167 TPNAKTLLDP---------------------LF--------QNVTYVEPGQSSEIEGRNGSKLRV--KATAGPVLGPPWQ 215 (344)
Q Consensus 167 ~~~~~~~l~~---------------------~~--------~~i~~l~~~~~~~~~~~~~~~~~i--~~~p~~~~g~~~~ 215 (344)
++....++.. ++ .++..++.++++.++ +++| ..+|++..+
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pGHt~~---- 151 (261)
T 3adr_A 81 KSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLG-----GYRMRLIYTPGHARH---- 151 (261)
T ss_dssp ETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECS-----SSEEEEEECTTSCTT----
T ss_pred CHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEEC-----CEEEEEEECCCCCCc----
Confidence 8765432211 11 245778899999987 5455 445553211
Q ss_pred CCCCeEEEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCc
Q 019221 216 RPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDL 294 (344)
Q Consensus 216 ~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f 294 (344)
..+|.+ . +++|+||+.+.... .. +.+. +.+.+. +....++++.++.++++.++|.|.+.+
T Consensus 152 --~~~~~~--~----~~lf~GD~~~~~~~------~~-~~~~---~~~~~~-~~~~~~sl~~l~~l~~~~v~~~H~~~~ 211 (261)
T 3adr_A 152 --HMSVLV--D----DFLFTGDSAGAYFN------GV-VIPT---TPPVID-YKMYMESLKRQIELKPKVVGFAHGGLV 211 (261)
T ss_dssp --CEEEEE--T----TEEEEETSSCEEET------TE-EECC---CCSCCC-HHHHHHHHHHHHHTCCSEEEETTTEEE
T ss_pred --cEEEEE--C----CEEEEcCccccccc------cc-ccCC---CCCCCC-HHHHHHHHHHHHcCCCCEEEeCCCCcc
Confidence 245542 2 79999999765320 01 1111 111111 113466777888889999999998754
No 35
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.34 E-value=1e-12 Score=121.67 Aligned_cols=170 Identities=16% Similarity=0.216 Sum_probs=107.0
Q ss_pred EEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC-CCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcC--
Q 019221 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK-SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMS-- 159 (344)
Q Consensus 83 ~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~-~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~-- 159 (344)
+-|.|||+|+.++..|||||.+.... .+. +.+. .+..... +|++|++||.|.|| .+.+..|.+++
T Consensus 29 ~~~~n~~li~~~~~~ilID~G~~~~~----~~~-----~~l~~~l~~~~~-~i~~Ii~TH~H~DH--~gg~~~l~~~~~~ 96 (289)
T 4ad9_A 29 LQGTNTYLVGTGPRRILIDTGEPAIP----EYI-----SCLKQALTEFNT-AIQEIVVTHWHRDH--SGGIGDICKSINN 96 (289)
T ss_dssp BTCCEEEEECSSSSEEEECCCSTTCH----HHH-----HHHHHHHHHTTC-CEEEEECSCSSHHH--HTTHHHHHHHSCC
T ss_pred CCceEEEEEecCCceEEEeCCCCCCh----HHH-----HHHHHHHHHcCC-CceEEEEcCCCCcc--cccHHHHHHhhcc
Confidence 56899999999889999999432111 011 0010 1111122 68999999999999 68888888765
Q ss_pred -CCceEEEccchHH---HHhhcCCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEc
Q 019221 160 -PNLKVIATPNAKT---LLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYE 235 (344)
Q Consensus 160 -p~~~v~~~~~~~~---~l~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~s 235 (344)
++++++..+.... .+.....+...+..|+++.++ +..+++..+|++..+ ..+|.+. + .+++|+
T Consensus 97 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---g~~~~~~~~pGHt~~------~~~~~~~--~--~~~lft 163 (289)
T 4ad9_A 97 DTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTE---GATLRVLYTPGHTDD------HMALLLE--E--ENAIFS 163 (289)
T ss_dssp SSCCCEEECCCSSCCCCCBTTTTBCEEECCTTCEEEET---TEEEEEEECCSSSTT------CEEEEET--T--TTEEEE
T ss_pred CCCceEEecCCCcchhhhccCCCCceEEcCCCCEEEeC---CeEEEEEECCCCCCC------CEEEEEc--C--CCEEEE
Confidence 4678887764321 111112457889999999997 223555556664221 2466663 2 379999
Q ss_pred CCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCcc
Q 019221 236 PHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (344)
Q Consensus 236 GDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~ 295 (344)
||+.+.... ..+. .+ ....++++.+..+.++.++|.|...+.
T Consensus 164 GD~~~~~~~--------------~~~~---~~-~~~~~sl~~l~~l~~~~v~pgHg~~~~ 205 (289)
T 4ad9_A 164 GDCILGEGT--------------TVFE---DL-YDYMNSLKELLKIKADIIYPGHGPVIH 205 (289)
T ss_dssp ETSSCSSSC--------------CCCS---CH-HHHHHHHHHHHHHTCSEEEESSSSCBS
T ss_pred ecccCCCCC--------------cCcC---CH-HHHHHHHHHHHcCCCCEEEeCCCChhc
Confidence 998664311 0000 00 023566777788899999999998764
No 36
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.33 E-value=7.1e-13 Score=116.81 Aligned_cols=161 Identities=19% Similarity=0.211 Sum_probs=99.4
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
++.|||+|+.++..+||||.. .. ..+. ..+... .+ +|++|++||.|.||+ +.+..|.+++ +++
T Consensus 11 ~~~n~~li~~~~~~iliD~G~---~~---~~l~----~~l~~~---g~-~i~~vilTH~H~DH~--gg~~~l~~~~-~~~ 73 (207)
T 2zwr_A 11 LQENAYLVETGEGPVLIDPGD---EP---EKLL----ALFQTT---GL-IPLAILLTHAHFDHV--GAVAPLVEAL-DLP 73 (207)
T ss_dssp TTEEEEEEEETTEEEEECCCS---CH---HHHH----HHHHHH---TC-CCSCEECSCCCGGGT--TTHHHHHHHH-CCC
T ss_pred cccEEEEEEeCCcEEEEeCCC---CH---HHHH----HHHHHc---CC-cccEEEECCCChHHH--ccHHHHHHHh-CCc
Confidence 457999999999999999932 11 1110 111111 12 489999999999995 6777777665 789
Q ss_pred EEEccchHHHHhhc-------CC-------ceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCc
Q 019221 164 VIATPNAKTLLDPL-------FQ-------NVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQ 229 (344)
Q Consensus 164 v~~~~~~~~~l~~~-------~~-------~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~ 229 (344)
+++++.....++.. +. ....++.++++. .+++..+||+..| ..++.++ +
T Consensus 74 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~i~-------~~~~~~~pGHt~g------~~~~~~~--~-- 136 (207)
T 2zwr_A 74 VYLHPLDLPLYEGADLAARAWGLAIPKPPLPVRPLEEGMRLF-------GFQVLHLPGHSPG------HVAFYDP--E-- 136 (207)
T ss_dssp EEECGGGHHHHHTHHHHHHHTTCCCCCCCSCCEECCTTCEET-------TEEEEECCSSSTT------CEEEEET--T--
T ss_pred EEECHHHHHHHhCchhhhhhcCCCCCcCCCCceEeCCCCEEE-------EEEEEeCCCCCCC------cEEEEEC--C--
Confidence 99998887755431 11 234455555432 5888888885332 2456553 2
Q ss_pred eEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHH---HHHHHHHHcCCC-EEEEeeeCCcc
Q 019221 230 LTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQE---DAVKLAKLLHAK-FIVPMKNGDLD 295 (344)
Q Consensus 230 ~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~e---ea~~~~~~l~~k-~vip~H~~~f~ 295 (344)
.+++|+||+.+.... +..|+ +. .+.+ ++++.++.+.++ .++|.|.....
T Consensus 137 ~~~lf~GD~~~~~~~---~~~~~----------~~----~~~~~~~~sl~~l~~l~~~~~i~pgHg~~~~ 189 (207)
T 2zwr_A 137 GAQVFSGDLLFRGSV---GRYDL----------PG----ADPKALFASLKRLLSLPPETRVHPGHGPGTT 189 (207)
T ss_dssp TTEEEEETSEETTEE---CCSSS----------TT----CCHHHHHHHHHHHTTSCTTCEEEESBSCCEE
T ss_pred CCEEEEecccCCCCc---CCCCC----------CC----CCHHHHHHHHHHHhcCCCCCEEECCCCCCCc
Confidence 489999999764321 11110 11 1333 445555556676 69999987544
No 37
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.33 E-value=2.2e-12 Score=122.30 Aligned_cols=174 Identities=20% Similarity=0.152 Sum_probs=104.2
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC--CCCCCCCCCccEEEecCCCCCCCChhhHHH-hhhcCC
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKP-LSKMSP 160 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~-L~~~~p 160 (344)
++.+||||+.++.+||||+..+.. ++ +... .....+. +++++ +||+|+|||.|.||+ +.+.. +...++
T Consensus 95 ~~~n~~LI~~~~~~iLIDtG~~~~--~~-~~~~-~l~~~L~~~Gi~~~---~Id~VilTH~H~DHi--ggl~~~~~~~fp 165 (331)
T 1p9e_A 95 TSVTGYLVNTGSKLVLVDTGAAGL--FG-PTLG-RLAANLKAAGYQPE---QVDEIYITHMHPDHV--GGLMVGEQLAFP 165 (331)
T ss_dssp EEEEEEEEECSSCEEEECCCCTTS--SC-TTCC-CHHHHHHHTTCCGG---GCCEEECSCCCHHHH--GGGEETTEESST
T ss_pred EEEEEEEEEECCEEEEEECCCCCc--CC-cchh-HHHHHHHHcCCCHH---HCCEEEeCCcccccC--CcccccccccCC
Confidence 445699999999999999955321 00 0000 0001111 23322 689999999999994 55542 233457
Q ss_pred CceEEEccchHHHHhhc---------------------------CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCC
Q 019221 161 NLKVIATPNAKTLLDPL---------------------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPP 213 (344)
Q Consensus 161 ~~~v~~~~~~~~~l~~~---------------------------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~ 213 (344)
++++|+++....++... ..++..++.++++. .++++..+||+..|
T Consensus 166 ~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~------~gi~vi~tpGHtpG-- 237 (331)
T 1p9e_A 166 NAVVRADQKEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV------PGIKALASHGHTPG-- 237 (331)
T ss_dssp TCEEECBHHHHHHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS------TTEEEEECTTSSTT--
T ss_pred CCEEEECHHHHHHHhCchhhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEc------ccEEEEEcCCCChh--
Confidence 89999887765533210 12344555554433 25888888876433
Q ss_pred CCCCCCeEEEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc------CCCEEE
Q 019221 214 WQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL------HAKFIV 287 (344)
Q Consensus 214 ~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l------~~k~vi 287 (344)
..+|+++.+ +.+++|+||+.+.... ....+|+. . .+ .++++++++..+.+ ....++
T Consensus 238 ----~~~~~i~~~--~~~vlf~GD~~~~~~~-~~~~p~~~-----~----~~--d~d~~~~~~s~~~ll~~~~~~~~~v~ 299 (331)
T 1p9e_A 238 ----HTTYVVESQ--GQKLALLGDLILVAAV-QFDDPSVT-----T----QL--DSDSKSVAVERKKAFADAAKGGYLIA 299 (331)
T ss_dssp ----CEEEEEEET--TEEEEECTTSCCCHHH-HTTCTTCC-----B----TT--CSSHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred ----CEEEEEEEC--CcEEEEEECccCcchh-cccCCCce-----e----cc--cCCHHHHHHHHHHHHHHHhcCCCEEE
Confidence 368889876 3799999999876532 11223221 1 11 33667666654432 357899
Q ss_pred EeeeC
Q 019221 288 PMKNG 292 (344)
Q Consensus 288 p~H~~ 292 (344)
|.|..
T Consensus 300 ~~H~~ 304 (331)
T 1p9e_A 300 ASHLS 304 (331)
T ss_dssp CTTSS
T ss_pred EECCC
Confidence 99975
No 38
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.32 E-value=1.1e-11 Score=125.02 Aligned_cols=198 Identities=12% Similarity=0.137 Sum_probs=117.8
Q ss_pred CCceEEEEEeC-----cEEEEEeCCcEEEEccccCCCCC----CCcccccc---cC----Cccc-CCCCCCCCCCccEEE
Q 019221 76 TDVFKLTYLEG-----NSWLWDLDGVKVLVDPILVGNLD----FGIPWLFD---AG----KKFL-KSFQLSDLPQVDCLL 138 (344)
Q Consensus 76 ~~~~~it~lGh-----ss~li~~~g~~ILiDP~~~g~~s----~p~~~~~~---~~----~~~~-~~~~~~~lp~iD~Vl 138 (344)
...++|++|.. +|+||+.++.+|||||....... ...+|... .. .+.+ +.+....+.+||+||
T Consensus 3 ~~~~~I~~ldvG~gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vi 82 (547)
T 2bib_A 3 SSGNKIHFINVQEGGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFIL 82 (547)
T ss_dssp CSCEEEEEECBSSSBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEE
T ss_pred CcCceEEEEEcCCCCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEE
Confidence 45678888743 69999999999999995431000 00112100 00 0000 112222345799999
Q ss_pred ecCCCCCCCChhhHHHhhhcCCCceEEEccchHHHH--------------------hhcCCceE--EeCCCceEEeCccc
Q 019221 139 ITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLL--------------------DPLFQNVT--YVEPGQSSEIEGRN 196 (344)
Q Consensus 139 ISH~H~DHld~~tl~~L~~~~p~~~v~~~~~~~~~l--------------------~~~~~~i~--~l~~~~~~~~~~~~ 196 (344)
|||.|.|| ++.+..|.++++..++++++.....+ +..+.++. .+..+++++++
T Consensus 83 lTH~H~DH--iggl~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g--- 157 (547)
T 2bib_A 83 VTHTHSDH--IGNVDELLSTYPVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFG--- 157 (547)
T ss_dssp CCCSCHHH--HTTHHHHHHHSCBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEET---
T ss_pred EcCCCccc--cCCHHHHHHhCCccEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecC---
Confidence 99999999 57888888776434577665432211 11122333 24567788887
Q ss_pred CCcEEEEEeec---CCcCC----CCCC--CCCeEEEEeCCCceEEEEcCCCCCcch----hhc-ccCccEEEEcccc-cc
Q 019221 197 GSKLRVKATAG---PVLGP----PWQR--PENGYLVNSSQGQLTLYYEPHCVYNQN----FLE-KERSDIIITPVIK-QL 261 (344)
Q Consensus 197 ~~~~~i~~~p~---~~~g~----~~~~--~~~g~vi~~~~g~~~i~~sGDt~~~~~----~~~-~~~~Dl~il~~~g-~~ 261 (344)
+++|++++. .|... ..+. ..++++|+.+ +.+|+|+||+..... +.. ..++|+++++--| ..
T Consensus 158 --~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~--~~~iLftGD~~~~~~~e~~l~~~~~~~DvLkv~HHG~S~ 233 (547)
T 2bib_A 158 --DMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVN--GKKIYLGGDLDNVHGAEDKYGPLIGKVDLMKFNHHHDTN 233 (547)
T ss_dssp --TEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEET--TEEEEECTTCCSTTSHHHHHHHHHCCCSEEECTTTTBCS
T ss_pred --CeeEEEecCccccCccccccccCCCCCCcEEEEEEEC--CEEEEecCCccchhhhhhhhcccccceeEEEeccccCcc
Confidence 788888762 22210 0011 2467888876 489999999987522 111 2489999987532 11
Q ss_pred CCCcccccCHHHHHHHHHHcCCCEEEEeee
Q 019221 262 LPKFTLVSGQEDAVKLAKLLHAKFIVPMKN 291 (344)
Q Consensus 262 ~~~~~~h~~~eea~~~~~~l~~k~vip~H~ 291 (344)
...+.++++.++|+.+|....
T Consensus 234 ---------~s~s~~fl~~v~P~~aiiS~g 254 (547)
T 2bib_A 234 ---------KSNTKDFIKNLSPSLIVQTSD 254 (547)
T ss_dssp ---------SSSCHHHHHHHCCSEEEESBS
T ss_pred ---------cCChHHHHHhcCCcEEEEcCC
Confidence 122356888899999886663
No 39
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.30 E-value=8.3e-12 Score=121.71 Aligned_cols=182 Identities=18% Similarity=0.222 Sum_probs=110.7
Q ss_pred cEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcC-CCceEE
Q 019221 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMS-PNLKVI 165 (344)
Q Consensus 87 ss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~-p~~~v~ 165 (344)
|||||+.+++++||||+. ..+.-.++ ..+..+ -+..+||+|++||.|.|| .+++..|.+++ |+++++
T Consensus 53 NsYLI~~~~~~vLIDtg~---~~~~~~~l-----~~l~~~--i~~~~IdyIi~TH~h~DH--~G~l~~l~~~~~~~~~v~ 120 (410)
T 4dik_A 53 NAYLVKLNGANVLIDGWK---GNYAKEFI-----DALSKI--VDPKEITHIIVNHTEPDA--SGSLPATLKTIGHDVEII 120 (410)
T ss_dssp EEEEEECSSCEEEECCCC---GGGHHHHH-----HHHTTT--SCGGGCCEEECSCCCHHH--HTTHHHHHHHHCSCCEEE
T ss_pred EEEEEEECCeEEEEeCCC---cchHHHHH-----HHHHHh--cCcccCCEEEeCcCCcch--hhhHHHHHHHcCCCCEEE
Confidence 799999999999999932 22100111 111111 122379999999999999 68888887764 689999
Q ss_pred EccchHHHHhhc--CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcch
Q 019221 166 ATPNAKTLLDPL--FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQN 243 (344)
Q Consensus 166 ~~~~~~~~l~~~--~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~ 243 (344)
+++.....++.. ..++..++.|+++.++ +..+++..+|+.|+. .+.++..+ +++|+||..-. +
T Consensus 121 ~s~~~~~~l~~~~~~~~~~~v~dGd~l~lG---~~~L~~i~tPg~H~p-------~~~~~y~~----~iLFsgD~fg~-h 185 (410)
T 4dik_A 121 ASNFGKRLLEGFYGIKDVTVVKDGEEREIG---GKKFKFVMTPWLHWP-------DTMVTYLD----GILFSCDVGGG-Y 185 (410)
T ss_dssp ECHHHHHHHHHHHCCCCEEECCTTCEEEET---TEEEEEEECTTSSST-------TCEEEEET----TEEEEETTTCC-S
T ss_pred eCHHHHHHHHhhcCccceeEecCCCEEeec---ceEEEEecCCCCCCC-------CCeeEEeC----CceEccccccc-c
Confidence 999888877765 2567889999999998 335666667765542 22222233 58999997421 1
Q ss_pred hhcccCcc--EEEE----ccccccCCCccccc--CHHHHHHHHHHcCCCEEEEeeeCCcc
Q 019221 244 FLEKERSD--IIIT----PVIKQLLPKFTLVS--GQEDAVKLAKLLHAKFIVPMKNGDLD 295 (344)
Q Consensus 244 ~~~~~~~D--l~il----~~~g~~~~~~~~h~--~~eea~~~~~~l~~k~vip~H~~~f~ 295 (344)
.....-+| .... +-.-.|.....+.. ....+++.++.|..+.++|.|...+.
T Consensus 186 ~~~~~~~d~~~~~~e~~~~~~~~yy~~i~~p~~~~v~~~L~kl~~Ldi~~I~P~HGpi~r 245 (410)
T 4dik_A 186 LLPEILDDSNESVVERYLPHVTKYIVTVIGHYKNYILEGAEKLSSLKIKALLPGHGLIWK 245 (410)
T ss_dssp SCCSSSBTTCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHTSCCSEEEESSSCBBS
T ss_pred ccCccccccchhhHHHHHHHHHHHHHhhccchHHHHHHHHHHHhCCCCCEEecCCcchhh
Confidence 11000000 0000 00000000000000 12567788888899999999987664
No 40
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.30 E-value=4.5e-12 Score=122.51 Aligned_cols=179 Identities=14% Similarity=0.099 Sum_probs=107.9
Q ss_pred eCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCceE
Q 019221 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKV 164 (344)
Q Consensus 85 Ghss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v 164 (344)
+.|||+|+ ++..+||||..+ .+.-... +.+..+ . +..+||+|+|||.|.|| .+.+..|.+++|++++
T Consensus 34 ~~n~~li~-~~~~iliD~G~~---~~~~~~~-----~~l~~~-~-~~~~i~~iiiTH~H~DH--~gg~~~l~~~~~~~~v 100 (402)
T 1e5d_A 34 TYNAYLVE-DEKTTLFDTVKA---EYKGELL-----CGIASV-I-DPKKIDYLVIQHLELDH--AGALPALIEACQPEKI 100 (402)
T ss_dssp EEEEEEEC-SSSCEEECCCCG---GGHHHHH-----HHHHTT-S-CGGGCCEEEECCCSHHH--HTTHHHHHHHHCCSEE
T ss_pred ceEEEEEE-CCCEEEEeCCCC---ccHHHHH-----HHHHHh-C-CcccCCEEEeCCCCccc--cccHHHHHHHCCCCEE
Confidence 45799999 678999999432 1000000 111111 1 22478999999999999 5788888877678999
Q ss_pred EEccchHHHHhhc-C---CceEEeCCCceEEeCcccCCcEEEEEee-cCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCC
Q 019221 165 IATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCV 239 (344)
Q Consensus 165 ~~~~~~~~~l~~~-~---~~i~~l~~~~~~~~~~~~~~~~~i~~~p-~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~ 239 (344)
|+++.....++.. + .++..++.++++.++ +..+++..+| ++..+ ..++.+ ++ .+++|+||+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~~~~~~~p~gH~~~------~~~~~~--~~--~~~l~~GD~~ 167 (402)
T 1e5d_A 101 FTSSLGQKAMESHFHYKDWPVQVVKHGETLSLG---KRTVTFYETRMLHWPD------SMVSWF--AD--EKVLISNDIF 167 (402)
T ss_dssp EEEHHHHHHHHHHHCCSSCCEEEECTTCEEECS---SCEEEEEECTTSSSTT------CEEEEE--TT--TTEEEEETTT
T ss_pred EEChHHHHHHHHHhCCCCCceEEcCCCCEEEEC---CCEEEEEeCCCCCCCC------cEEEEE--CC--CCEEEecccc
Confidence 9998887776654 2 367889999999997 2234444455 33211 134433 32 4899999985
Q ss_pred CcchhhcccCccEEEEccc---cccCC----Cc-----ccccCHHHHHHHHHH--cCCCEEEEeeeCCcc
Q 019221 240 YNQNFLEKERSDIIITPVI---KQLLP----KF-----TLVSGQEDAVKLAKL--LHAKFIVPMKNGDLD 295 (344)
Q Consensus 240 ~~~~~~~~~~~Dl~il~~~---g~~~~----~~-----~~h~~~eea~~~~~~--l~~k~vip~H~~~f~ 295 (344)
... +..|. +++.. ..|.. .+ .......++++.++. +++++++|.|...+.
T Consensus 168 ~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~ 231 (402)
T 1e5d_A 168 GQN-----IAASE-RFSDQIPVHTLERAMREYYANIVNPYAPQTLKAIETLVGAGVAPEFICPDHGVIFR 231 (402)
T ss_dssp CCC-----CCCSC-CBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBEE
T ss_pred cCc-----ccccc-ccccccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhCCCCcCEEecCCcceee
Confidence 321 11110 11100 00000 00 000112567788888 899999999987665
No 41
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.29 E-value=3.3e-13 Score=118.88 Aligned_cols=166 Identities=16% Similarity=0.195 Sum_probs=99.8
Q ss_pred EEEEeCcEEEEEe--CCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhc
Q 019221 81 LTYLEGNSWLWDL--DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKM 158 (344)
Q Consensus 81 it~lGhss~li~~--~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~ 158 (344)
+.+++.|||+|+. ++..||||| |... .-+. +. +....+ ++|+|++||.|+|| .+.+..|.++
T Consensus 8 ~~~~~~n~~li~~~~~~~~iLiD~---G~~~---~~l~----~~---l~~~g~-~i~~ii~TH~H~DH--~gg~~~l~~~ 71 (210)
T 2xf4_A 8 VTAFSQNCSLIWCEQTRLAALVDP---GGDA---EKIK----QE---VDASGV-TLMQILLTHGHLDH--VGAASELAQH 71 (210)
T ss_dssp ETTTTEEEEEEECTTTCEEEEECC---CSCH---HHHH----HH---HHHHTC-EEEEEECSCSCHHH--HTTHHHHHHH
T ss_pred eCCcccEEEEEEecCCCcEEEEcC---CCCH---HHHH----HH---HHHcCC-ceeEEEECCCChhh--hcCHHHHHHH
Confidence 4456789999984 678999999 4211 1010 01 111112 48999999999999 6788888776
Q ss_pred CCCceEEEccchHHHHhh--------cC-------CceEEeCCCceEEeCcccCCcEEE--EEeecCCcCCCCCCCCCeE
Q 019221 159 SPNLKVIATPNAKTLLDP--------LF-------QNVTYVEPGQSSEIEGRNGSKLRV--KATAGPVLGPPWQRPENGY 221 (344)
Q Consensus 159 ~p~~~v~~~~~~~~~l~~--------~~-------~~i~~l~~~~~~~~~~~~~~~~~i--~~~p~~~~g~~~~~~~~g~ 221 (344)
+ ++++|+++.....+.+ ++ .....++.++++.++ +++| ..+|++..| ..++
T Consensus 72 ~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pgHt~g------~~~~ 139 (210)
T 2xf4_A 72 Y-GVPVIGPEKEDEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVG-----NVTLQVLHCPGHTPG------HVVF 139 (210)
T ss_dssp H-TCCEECCCGGGHHHHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEET-----TEEEEEEECCSSSTT------CEEE
T ss_pred c-CCcEEEecchHHHHhccchhhhhhcCCcccCCCCCceEECCCCEEEEC-----CeEEEEEECCCCCCC------cEEE
Confidence 5 6889988776553322 12 123557788899997 5555 445554221 2455
Q ss_pred EEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHH----HHHHcCCC-EEEEeeeCCcc
Q 019221 222 LVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVK----LAKLLHAK-FIVPMKNGDLD 295 (344)
Q Consensus 222 vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~----~~~~l~~k-~vip~H~~~f~ 295 (344)
.+ ++ .+++|+||+.+...+ +..| .+. .+.++.++ .++.+.++ .++|.|.....
T Consensus 140 ~~--~~--~~~lf~GD~~~~~~~---~~~~----------~~~----~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~~~ 197 (210)
T 2xf4_A 140 FD--EQ--SQLLISGDVIFKGGV---GRSD----------FPR----GDHTQLIDAIKRKLLPLGDDVTFIPGHGPLST 197 (210)
T ss_dssp EE--TT--TTEEEEETSEETTEE---CCCC----------STT----CCHHHHHHHHHHHTGGGCTTCEEEESSSCCEE
T ss_pred Ee--CC--CCEEEECCEeccCCc---CCCC----------CCC----CCHHHHHHHHHHHHhcCCCCeEEECCCCCccc
Confidence 54 32 589999999765321 1111 011 13344444 34456666 79999976543
No 42
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.29 E-value=8.6e-12 Score=113.00 Aligned_cols=144 Identities=12% Similarity=0.093 Sum_probs=88.3
Q ss_pred EEEEeCcEEEEEeCCcEEEEccccCCCCC-CCccccc---cc-------CCccc-CCCCCCCC--CCccEEEecCCCCCC
Q 019221 81 LTYLEGNSWLWDLDGVKVLVDPILVGNLD-FGIPWLF---DA-------GKKFL-KSFQLSDL--PQVDCLLITQSLDDH 146 (344)
Q Consensus 81 it~lGhss~li~~~g~~ILiDP~~~g~~s-~p~~~~~---~~-------~~~~~-~~~~~~~l--p~iD~VlISH~H~DH 146 (344)
...++-+||||+.++.+||||+..+.... -+-.|-. .+ ..+.+ ..+....+ .+||+|++||.|+||
T Consensus 34 ~~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH 113 (254)
T 3dha_A 34 LLNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDH 113 (254)
T ss_dssp EEEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHH
T ss_pred eEEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhc
Confidence 45667789999999999999996532100 0000000 00 00000 00100011 248999999999999
Q ss_pred CChhhHHHhhhcCCCceEEEccchHHHHhhc----------CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCC
Q 019221 147 CHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQR 216 (344)
Q Consensus 147 ld~~tl~~L~~~~p~~~v~~~~~~~~~l~~~----------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~ 216 (344)
.+.+..|. ++++|+++.....+... ..++..+ .++...++ ++++..+|++..|
T Consensus 114 --~gg~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~i~~~~~pGHt~g----- 176 (254)
T 3dha_A 114 --AGGNGAFT----NTPIIVQRTEYEAALHREEYMKECILPHLNYKII-EGDYEVVP-----GVQLLYTPGHSPG----- 176 (254)
T ss_dssp --HTTGGGCS----SSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEE-CSSEEEET-----TEEEEECCSSSTT-----
T ss_pred --CCChHHCC----CCEEEECHHHHHHhhccccccccccCcccceEEe-cCCccccC-----CEEEEECCCCCCC-----
Confidence 56766665 68999988876654321 1123333 35555555 7999888876433
Q ss_pred CCCeEEEEeCCCceEEEEcCCCCCcch
Q 019221 217 PENGYLVNSSQGQLTLYYEPHCVYNQN 243 (344)
Q Consensus 217 ~~~g~vi~~~~g~~~i~~sGDt~~~~~ 243 (344)
..+++++..+ +.+++|+||+.+...
T Consensus 177 -~~~~~~~~~~-~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 177 -HQSLFIETEQ-SGSVLLTIDASYTKE 201 (254)
T ss_dssp -CEEEEEEETT-TEEEEEEETTCSSHH
T ss_pred -CEEEEEEeCC-CCEEEEEecccchhh
Confidence 3688888764 369999999988754
No 43
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.28 E-value=1.1e-11 Score=119.62 Aligned_cols=178 Identities=17% Similarity=0.129 Sum_probs=106.4
Q ss_pred CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCceEE
Q 019221 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVI 165 (344)
Q Consensus 86 hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v~ 165 (344)
.|||+|+. +..+||||..+ .. ...+. +.+... + +..+||+|+|||.|.|| .+.+..|.+++|+++++
T Consensus 36 ~n~~li~~-~~~iliD~g~~---~~-~~~~~----~~l~~~-~-~~~~i~~iiiTH~H~DH--~gg~~~l~~~~~~~~v~ 102 (398)
T 1ycg_A 36 YNAYLIVD-DKTALVDTVYE---PF-KEELI----AKLKQI-K-DPVKLDYLVVNHTESDH--AGAFPAIMELCPDAHVL 102 (398)
T ss_dssp ECCEEECS-SSCEEECCCCG---GG-HHHHH----HHHHHH-C-SSCCCSEEEESCCSHHH--HTTHHHHHHHCTTCEEE
T ss_pred EEEEEEEC-CCEEEEeCCCc---cc-HHHHH----HHHHHh-c-CcccCCEEEeCCCCcch--hhhHHHHHHHCCCCEEE
Confidence 57899995 57999999442 10 00010 111111 1 22479999999999999 68888888887789999
Q ss_pred EccchHHHHhhc-C---CceEEeCCCceEEeCcccCCcEEEEEee-cCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCC
Q 019221 166 ATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVY 240 (344)
Q Consensus 166 ~~~~~~~~l~~~-~---~~i~~l~~~~~~~~~~~~~~~~~i~~~p-~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~ 240 (344)
+++.....++.. + .++..++.|+++.++ +..+++..+| ++..+ ..++. .++ .+++|+||+..
T Consensus 103 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g---~~~~~~~~~p~gH~~~------~~~~~--~~~--~~~lf~GD~~~ 169 (398)
T 1ycg_A 103 CTQRAFDSLKAHYSHIDFNYTIVKTGTSVSLG---KRSLTFIEAPMLHWPD------SMFTY--VPE--EALLLPNDAFG 169 (398)
T ss_dssp ECHHHHHHHHHHTCSCCCEEEECCTTCEEECS---SCEEEEEECTTSSSTT------CEEEE--ETT--TTEEEEETTTC
T ss_pred EcHHHHHHHHHHhCCCCcceEEeCCCCEEeeC---CcEEEEEeCCCCCCCC------cEEEE--ECC--CcEEEeccccc
Confidence 998887777654 2 357889999999997 2234444455 33211 12333 332 48999999842
Q ss_pred cchhhcccCccEEEEcc----------ccccCCC--cccccCHHHHHHHHHH--cCCCEEEEeeeCCcc
Q 019221 241 NQNFLEKERSDIIITPV----------IKQLLPK--FTLVSGQEDAVKLAKL--LHAKFIVPMKNGDLD 295 (344)
Q Consensus 241 ~~~~~~~~~~Dl~il~~----------~g~~~~~--~~~h~~~eea~~~~~~--l~~k~vip~H~~~f~ 295 (344)
.. . ..+- +++. ...|... ........++++.++. +.+++++|.|...+.
T Consensus 170 ~~-~----~~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~ 232 (398)
T 1ycg_A 170 QH-I----ATSV-RFDDQVDAGLIMDEAAKYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIWR 232 (398)
T ss_dssp CC-C----CCSC-CBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBBC
T ss_pred cc-c----Cccc-cccccccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhCCCCccEEECCCchhhh
Confidence 21 1 0010 0000 0001000 0000012567888888 899999999987654
No 44
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.28 E-value=2.4e-12 Score=115.35 Aligned_cols=170 Identities=9% Similarity=0.072 Sum_probs=106.3
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
++.+||+|+.++..|||||..+. .. ..-+. ..+.... ..+|++|++||.|.|| .+.+..+.+. +++
T Consensus 35 ~~~n~~li~~~~~~iLiD~G~~~-~~--~~~~~----~~l~~~~---~~~i~~ii~TH~H~DH--~gg~~~~~~~--~~~ 100 (232)
T 1a7t_A 35 VPSNGMIVINNHQAALLDTPIND-AQ--TEMLV----NWVTDSL---HAKVTTFIPNHWHGDC--IGGLGYLQRK--GVQ 100 (232)
T ss_dssp EEEEEEEEEETTEEEEESCCSSH-HH--HHHHH----HHHHHHH---CCEEEEEECSSSSHHH--HTTHHHHHHT--TCE
T ss_pred ccceEEEEEeCCEEEEEeCCCCH-HH--HHHHH----HHHHHhc---CCCeEEEEeCCCCccc--cCCHHHHHhC--CCe
Confidence 44799999999999999994320 00 00000 0011110 1378999999999999 5777777762 789
Q ss_pred EEEccchHHHHhhcC--CceEEeCCCceEEeCcccCCcEEEEE---eecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCC
Q 019221 164 VIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKA---TAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHC 238 (344)
Q Consensus 164 v~~~~~~~~~l~~~~--~~i~~l~~~~~~~~~~~~~~~~~i~~---~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt 238 (344)
+|+++....+++..+ .....++.++.+.++ +.+|++ +|++..+ ..++.+.. .+++|+||+
T Consensus 101 v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~~pgHt~g------~~~~~~~~----~~~lf~GD~ 165 (232)
T 1a7t_A 101 SYANQMTIDLAKEKGLPVPEHGFTDSLTVSLD-----GMPLQCYYLGGGHATD------NIVVWLPT----ENILFGGCM 165 (232)
T ss_dssp EEEEHHHHHHHHHHTCCCCSEEESSEEEEEET-----TEEEEEECCCCSSSTT------CCEEEETT----TTEEEEETT
T ss_pred EEEcHHHHHHHHhcCCCCCceecCCCCEEEEC-----CeEEEEEeCCCCCCCC------CEEEEECC----CCEEEEcCc
Confidence 999988877776543 234667888888887 555555 4554322 24666532 379999999
Q ss_pred CCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc--CCCEEEEeeeCCcc
Q 019221 239 VYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLD 295 (344)
Q Consensus 239 ~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l--~~k~vip~H~~~f~ 295 (344)
.+....... +.. +... .....++++.++.+ +++.++|.|...+.
T Consensus 166 ~~~~~~~~~-----------~~~-~~~~-~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 211 (232)
T 1a7t_A 166 LKDNQTTSI-----------GNI-SDAD-VTAWPKTLDKVKAKFPSARYVVPGHGNYGG 211 (232)
T ss_dssp SCCTTCCSC-----------CCC-TTCC-TTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred ccccCCccc-----------ccC-CCCC-HHHHHHHHHHHHhhCCCCCEEECCCCCccc
Confidence 764210000 100 1111 11346777777777 78999999987653
No 45
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.28 E-value=7.3e-12 Score=121.77 Aligned_cols=181 Identities=13% Similarity=0.165 Sum_probs=107.5
Q ss_pred eCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCceE
Q 019221 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKV 164 (344)
Q Consensus 85 Ghss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v 164 (344)
..|||+|+. +..+||||... .. ..-+. +.+..+ -+..+||+|++||.|.|| .+++..|.+++|++++
T Consensus 40 ~~n~~li~~-~~~iLID~G~~---~~-~~~~~----~~l~~~--~~~~~i~~ii~TH~H~DH--~gg~~~l~~~~~~~~v 106 (414)
T 2q9u_A 40 SYNSYFIDD-ECPTVIDSVKY---PF-AEEWL----SRIAAC--CPLDKIKYVVMNHAEGDH--ASSLKDHYHKFTNATF 106 (414)
T ss_dssp EECCEEECS-SSCEEECCCCG---GG-HHHHH----HHHHHH--SCGGGCCEEECSCCSGGG--TTTHHHHGGGSTTCEE
T ss_pred ceeEEEEEC-CCEEEEeCCCc---cc-HHHHH----HHHHHh--cCcccCCEEEeCCCCcch--hcCHHHHHHHCCCCEE
Confidence 357899995 78999999432 10 00010 011111 122378999999999999 5888888888778999
Q ss_pred EEccchHHHHhhc-C---CceEEeCCCceEEeCcccCCcEEEEEee-cCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCC
Q 019221 165 IATPNAKTLLDPL-F---QNVTYVEPGQSSEIEGRNGSKLRVKATA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCV 239 (344)
Q Consensus 165 ~~~~~~~~~l~~~-~---~~i~~l~~~~~~~~~~~~~~~~~i~~~p-~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~ 239 (344)
|+++.....++.. + .++..++.++++.++ +..+++..+| ++.. .++++..++ .+++|+||..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg---~~~~~~~~~p~gHt~--------~~~~~~~~~--~~~lf~GD~~ 173 (414)
T 2q9u_A 107 VCTKKCQEHLKILYGMEKATWLIVDDKYTLKIG---KRTLKFIPVPLLHWP--------DSTFTYCPE--DKILFSNDGF 173 (414)
T ss_dssp EECHHHHHHHHHHHCCTTCCEEECCTTCCEECS---SCEEEEEECTTSSST--------TCEEEEETT--TTEEEEETTT
T ss_pred EECHHHHHHHHHHhCCCCCeeEEeCCCCEEEEC---CeEEEEEeCCCCCCC--------CceEEEECC--CeEEEEcccc
Confidence 9998887766543 2 357888999999997 2235566666 4321 233333332 4899999964
Q ss_pred Ccchhhccc--C--cc--EEEEccccccC----CCcccccCHHHHHHHHHHcCCCEEEEeeeCCcc
Q 019221 240 YNQNFLEKE--R--SD--IIITPVIKQLL----PKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (344)
Q Consensus 240 ~~~~~~~~~--~--~D--l~il~~~g~~~----~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~ 295 (344)
.. ...... . .+ ..+.+. ..|. ..+. ....++++.++.+++++++|.|...+.
T Consensus 174 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~sl~~l~~l~~~~i~pgHg~~~~ 235 (414)
T 2q9u_A 174 GQ-HYATSRRWADECDVSHVMHLF-KEYTANILGLFS--AQMRKALEVASTVEIKYILSAHGVSWR 235 (414)
T ss_dssp CC-CCCCSCCBGGGSCHHHHHHHH-HHHHHHHTTTCH--HHHHHHHHHHHTSCCSEEEESSSCBEE
T ss_pred cc-ccCcccccccccchhhHHHHH-HHHHHHheehHH--HHHHHHHHHHhCCCCCEEECCCcCeec
Confidence 32 110000 0 00 000000 0000 0000 012577788888899999999987654
No 46
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.27 E-value=1.6e-11 Score=114.38 Aligned_cols=174 Identities=18% Similarity=0.120 Sum_probs=105.4
Q ss_pred eCcEEEEE-eCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 85 EGNSWLWD-LDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 85 Ghss~li~-~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
+.|||+|+ .++..+||||..+. . .+-+ .+.+..+ +++..+|++|++||.|.|| .+.+..|.+++|+++
T Consensus 23 ~~n~~li~~~~~~~iLID~G~~~--~--~~~~----~~~l~~~-~~~~~~i~~Ii~TH~H~DH--~gg~~~l~~~~~~a~ 91 (303)
T 2vw8_A 23 QVPVFLLRLGEASWALVEGGISR--D--AELV----WADLCRW-VADPSQVHYWLITHKHYDH--CGLLPYLCPRLPNVQ 91 (303)
T ss_dssp TSCEEEEEEETTEEEEECCCCGG--G--HHHH----HHHHHHH-CSCGGGEEEEECCCCSTTT--TTTHHHHGGGCTTCE
T ss_pred CceEEEEEeCCCceEEEECCCCC--c--HHHH----HHHHHHH-hcCcccceEEEeccCCccc--cCCHHHHHHhCCCCe
Confidence 36899994 88899999994421 0 0000 0111111 1122478999999999999 578888888878899
Q ss_pred EEEccchHHHHhh-----------------cC----------CceEEeCCCceEEeCcccC-CcEEEEEeecCCcCCCCC
Q 019221 164 VIATPNAKTLLDP-----------------LF----------QNVTYVEPGQSSEIEGRNG-SKLRVKATAGPVLGPPWQ 215 (344)
Q Consensus 164 v~~~~~~~~~l~~-----------------~~----------~~i~~l~~~~~~~~~~~~~-~~~~i~~~p~~~~g~~~~ 215 (344)
+++++.....++. ++ .++..++.|++++++ + ..+++..+||+..+
T Consensus 92 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg---~g~~l~~i~~pGHt~g---- 164 (303)
T 2vw8_A 92 VLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELG---PRHRLQVIEAHGHSDD---- 164 (303)
T ss_dssp EEEEHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEE---TTEEEEEEECTTSSTT----
T ss_pred EEECHHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecC---CCeEEEEEECCCCCcc----
Confidence 9998876543321 10 235678889999987 1 12666667764322
Q ss_pred CCCCeEEEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCccc-ccCHHHHHHHHHHcCCC-EEEEeeeCC
Q 019221 216 RPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTL-VSGQEDAVKLAKLLHAK-FIVPMKNGD 293 (344)
Q Consensus 216 ~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~-h~~~eea~~~~~~l~~k-~vip~H~~~ 293 (344)
..+|.+. + .+++|+||+.+...- .. +...+.+.. -....++++.++.++++ .++|.|...
T Consensus 165 --~~~~~~~--~--~~~lf~GD~~~~~~~-~~-----------~~~~~~~~~d~~~~~~sl~~l~~l~~~~~v~pgHg~~ 226 (303)
T 2vw8_A 165 --HVVFYDV--R--RRRLFCGDALGEFDE-AE-----------GVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGGL 226 (303)
T ss_dssp --CEEEEET--T--TTEEEEETTTCEECT-TT-----------CSEECCCSSCHHHHHHHHHHHHTSSCCSEEEESSSCE
T ss_pred --cEEEEEC--C--CCEEEEcCccCcccC-cc-----------cccCCCCCCCHHHHHHHHHHHhcCCCCeEEECCCCCc
Confidence 2466653 2 489999998642110 00 000011101 00124556666777899 999999876
Q ss_pred c
Q 019221 294 L 294 (344)
Q Consensus 294 f 294 (344)
+
T Consensus 227 ~ 227 (303)
T 2vw8_A 227 L 227 (303)
T ss_dssp E
T ss_pred c
Confidence 5
No 47
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.26 E-value=2.7e-12 Score=114.62 Aligned_cols=170 Identities=14% Similarity=0.097 Sum_probs=104.2
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
++.+||+|+.++..+||||..+.... .-+. ..+.... ..+|++|++||.|.|| .+.+..|.++ +++
T Consensus 39 ~~~n~~li~~~~~~iliD~G~~~~~~---~~~~----~~l~~~~---~~~i~~ii~TH~H~DH--~gg~~~l~~~--~~~ 104 (227)
T 1mqo_A 39 VPSNGLVLNTSKGLVLVDSSWDDKLT---KELI----EMVEKKF---QKRVTDVIITHAHADR--IGGIKTLKER--GIK 104 (227)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHHH---HHHH----HHHHHHH---TSCEEEEECCCCSHHH--HTTHHHHHHH--TCE
T ss_pred ecceEEEEEeCCeEEEEECCCChHHH---HHHH----HHHHHhc---CCCceEEEeCCCCchh--ccchHHHhhC--CcE
Confidence 45789999999999999994321000 0000 0000010 2378999999999999 5788888765 688
Q ss_pred EEEccchHHHHhhcC--CceEEeCCCceEEeCcccCCcEEEEE---eecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCC
Q 019221 164 VIATPNAKTLLDPLF--QNVTYVEPGQSSEIEGRNGSKLRVKA---TAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHC 238 (344)
Q Consensus 164 v~~~~~~~~~l~~~~--~~i~~l~~~~~~~~~~~~~~~~~i~~---~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt 238 (344)
+++++.....++..+ ..+..+..++.+.++ +++|++ +|++..| ..++.+. + .+++|+||+
T Consensus 105 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~i~~~~~~pgHt~g------~~~~~~~--~--~~~lf~GD~ 169 (227)
T 1mqo_A 105 AHSTALTAELAKKNGYEEPLGDLQTVTNLKFG-----NMKVETFYPGKGHTED------NIVVWLP--Q--YNILVGGCL 169 (227)
T ss_dssp EECBHHHHHHHHHTTCCCCCCCBCSEEEEEET-----TEEEEEECCCCSSSSS------CCEEEET--T--TTEEEEETT
T ss_pred EEeccchHHHHHhcCCCCCccccCCCCeeeEC-----CEEEEEEecCCCCCCC------CEEEEEC--C--CCEEEEeee
Confidence 988877766666543 234556777788887 677755 4554322 2466653 2 489999998
Q ss_pred CCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc--CCCEEEEeeeCCcc
Q 019221 239 VYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLD 295 (344)
Q Consensus 239 ~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l--~~k~vip~H~~~f~ 295 (344)
.+....... +.+ +.... ....++++.++.+ +++.++|.|...+.
T Consensus 170 ~~~~~~~~~-----------~~~-~~~~~-~~~~~sl~~l~~~~~~~~~i~pgHg~~~~ 215 (227)
T 1mqo_A 170 VKSTSAKDL-----------GNV-ADAYV-NEWSTSIENVLKRYRNINAVVPGHGEVGD 215 (227)
T ss_dssp SCCTTCCSC-----------CCC-TTCCH-HHHHHHHHHHHHHCCSCSEEEESSSCCBC
T ss_pred eeccCcccc-----------CcC-CCCCH-HHHHHHHHHHHHhcCCCCEEEcCCCCccc
Confidence 764211000 111 11010 1235666666665 78999999987543
No 48
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.24 E-value=7.2e-12 Score=117.23 Aligned_cols=175 Identities=17% Similarity=0.118 Sum_probs=106.0
Q ss_pred eCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC--CCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCc
Q 019221 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (344)
Q Consensus 85 Ghss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~ 162 (344)
+.|||+|+.++..+||||..+.... ..-+ ...+. +++. .+|++|++||.|.|| ++.+..|.++ ++
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~~--~~~l----~~~l~~~g~~~---~~i~~Vi~TH~H~DH--~gg~~~l~~~--~~ 87 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRAA--RGAL----ELHLAELGLCF---QDVKTILLTHHHPDH--YGLSGFFEGL--GA 87 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHHH--HHHH----HHHHHHTTCCG---GGCCEEEESCCSHHH--HTTHHHHHHT--TC
T ss_pred cEEEEEEEcCCceEEEECCCCCHHH--HHHH----HHHHHHcCCCh---hhcCEEEEcCCCCcc--cccHHHHHhC--CC
Confidence 4689999998899999994431000 0000 00111 1222 268999999999999 6788888765 68
Q ss_pred eEEEccchHHHHhh------------------cC-----------------------CceEEeCCCceEEeCcccCCcEE
Q 019221 163 KVIATPNAKTLLDP------------------LF-----------------------QNVTYVEPGQSSEIEGRNGSKLR 201 (344)
Q Consensus 163 ~v~~~~~~~~~l~~------------------~~-----------------------~~i~~l~~~~~~~~~~~~~~~~~ 201 (344)
++++++....+++. ++ .....++.++++.++ +..++
T Consensus 88 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g---g~~~~ 164 (317)
T 2zo4_A 88 RVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVA---GKRLR 164 (317)
T ss_dssp EEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEET---TEEEE
T ss_pred EEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeC---CceEE
Confidence 99998776443221 11 135678889999997 22466
Q ss_pred EEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc
Q 019221 202 VKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL 281 (344)
Q Consensus 202 i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l 281 (344)
+..+||+..+ ..++.+ ++ .+++|+||+.+....-.. ...+ +.+ ...+ ....++++.++.+
T Consensus 165 ~i~tpGHt~g------~~~~~~--~~--~~~lf~GD~~~~~~~~~~-----~~~~--~~~--~~~~-~~~~~sl~~l~~l 224 (317)
T 2zo4_A 165 VLWTPGHADG------HAAFYL--EE--EGVLLAGDALLEKVSPNV-----GLWA--YTR--ENPL-KDFLRSLDRLADL 224 (317)
T ss_dssp EEECCSSSTT------CEEEEE--TT--TTEEEEETSCCSSSCCCC-----CCCT--TSC--SCHH-HHHHHHHHHHHTS
T ss_pred EEECCCCCcc------cEEEEe--CC--CCEEEECCEecCCCCCCC-----cccC--CCC--CchH-HHHHHHHHHHhcC
Confidence 6667765322 245554 32 489999999765321100 0001 000 0011 0235667777788
Q ss_pred CCCEEEEeeeCCcc
Q 019221 282 HAKFIVPMKNGDLD 295 (344)
Q Consensus 282 ~~k~vip~H~~~f~ 295 (344)
+++.++|.|...+.
T Consensus 225 ~~~~v~pgHg~~~~ 238 (317)
T 2zo4_A 225 GARVAYAGHFGPIA 238 (317)
T ss_dssp CCSEEEESSSSCBS
T ss_pred CCCEEECCCCCccC
Confidence 99999999988764
No 49
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.23 E-value=9.4e-12 Score=113.92 Aligned_cols=162 Identities=19% Similarity=0.293 Sum_probs=100.7
Q ss_pred CCceEEEEE----eCcEEEEEe-CCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChh
Q 019221 76 TDVFKLTYL----EGNSWLWDL-DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLK 150 (344)
Q Consensus 76 ~~~~~it~l----Ghss~li~~-~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~ 150 (344)
.+.|+|+.+ +.+||+|+. ++..+|||| |....-..++ .. ..+ +|++|++||.|+|| .+
T Consensus 5 ~g~m~i~~i~~~~~n~~yli~~~~~~~vlID~---G~~~~i~~~l--------~~---~g~-~i~~Il~TH~H~DH--~g 67 (258)
T 2qed_A 5 IGSMNLNSIPAFQDNYIWVLTNDEGRCVIVDP---GEAAPVLKAI--------AE---HKW-MPEAIFLTHHHHDH--VG 67 (258)
T ss_dssp --CCEEEEEEETTTEEEEEEECTTSEEEEECC---SCHHHHHHHH--------HH---HTC-EEEEEECCSCCHHH--HT
T ss_pred cCccEEEEecccCceEEEEEEECCCcEEEEeC---CCcHHHHHHH--------HH---cCC-CCCEEEeCCCCccc--cC
Confidence 345666665 345999998 678999999 4221001111 11 122 68999999999999 68
Q ss_pred hHHHhhhcCCCceEEEccchHHHHhhcCCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCce
Q 019221 151 TLKPLSKMSPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQL 230 (344)
Q Consensus 151 tl~~L~~~~p~~~v~~~~~~~~~l~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~ 230 (344)
.+..|.++++++++|+++... + ......+..|+++.++ +..+++..+||+..| ..+|. . .
T Consensus 68 g~~~l~~~~~~~~v~~~~~~~--~---~~~~~~~~~g~~~~~g---~~~~~vi~tPGHt~g------~~~~~---~---~ 127 (258)
T 2qed_A 68 GVKELLQHFPQMTVYGPAETQ--D---KGATHLVGDGDTIRVL---GEKFTLFATPGHTLG------HVCYF---S---R 127 (258)
T ss_dssp THHHHHHHCTTCEEEECGGGG--G---GTCSEECCTTCEEEET---TEEEEEEECCSSSTT------CEEEE---E---T
T ss_pred CHHHHHHHCCCCEEEeccccc--C---CCCcEEeCCCCEEEEC---CcEEEEEECCCCCCC------CeEEE---c---C
Confidence 888898887668999876541 1 1234678889999997 224555666765322 24555 2 3
Q ss_pred EEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHH---HHHHHHHcCCC-EEEEeeeCC
Q 019221 231 TLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQED---AVKLAKLLHAK-FIVPMKNGD 293 (344)
Q Consensus 231 ~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~ee---a~~~~~~l~~k-~vip~H~~~ 293 (344)
+++|+||+.+.... |.. + .-++++ +++.+..+.++ .++|.|...
T Consensus 128 ~~lftGD~l~~~~~--------------g~~---~--~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~ 175 (258)
T 2qed_A 128 PYLFCGDTLFSGGC--------------GRL---F--EGTPSQMYQSLMKINSLPDDTLICCAHEYT 175 (258)
T ss_dssp TEEEEETTEETTEE--------------CCC---S--SSCHHHHHHHHHHHHTSCTTCEEEESBCCH
T ss_pred CEEEECCCCCCCCc--------------CCC---C--CCCHHHHHHHHHHHHcCCCCeEEECCCcch
Confidence 79999998654211 111 0 013343 44555567776 688999764
No 50
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.23 E-value=1.4e-11 Score=111.87 Aligned_cols=187 Identities=19% Similarity=0.224 Sum_probs=110.6
Q ss_pred eCcEEEEEeC----CcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCC
Q 019221 85 EGNSWLWDLD----GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSP 160 (344)
Q Consensus 85 Ghss~li~~~----g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p 160 (344)
+++||||+.+ +..|||||..+. .. ... .. +....+ +|++||+||.|.||+ +.+..|.+.++
T Consensus 14 ~~~~yli~~~~~~~~~~ilID~g~~~-~~---~~~-----~~---l~~~g~-~i~~Il~TH~H~DH~--gg~~~l~~~~~ 78 (245)
T 2gcu_A 14 STFTYLLADVSHPDKPALLIDPVDKT-VD---RDL-----KL---IDELGL-KLIYAMNTHVHADHV--TGTGLLKTKLP 78 (245)
T ss_dssp TEEEEEEEETTSTTCEEEEESCBGGG-HH---HHH-----HH---HHHHTC-EEEEEECSSCCSSSC--BSHHHHHHHST
T ss_pred ceEEEEEEcCCCCCCcEEEEeCCCch-HH---HHH-----HH---HHHCCC-eeeEEEeCCCChhhh--hhHHHHHHhCC
Confidence 6789999984 689999995421 00 000 00 111122 589999999999995 77888877456
Q ss_pred CceEEEccchHHHHhhcCCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCC--CceEEEEcCCC
Q 019221 161 NLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQ--GQLTLYYEPHC 238 (344)
Q Consensus 161 ~~~v~~~~~~~~~l~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~--g~~~i~~sGDt 238 (344)
++++++++.... .....+..|+++.++ +..+++..+|++..+ ..+|++...+ ++.+++|+||+
T Consensus 79 ~~~v~~~~~~~~------~~~~~~~~g~~~~~g---~~~i~v~~tpGHt~g------~~~~~~~~~~~~~~~~~lftGD~ 143 (245)
T 2gcu_A 79 GVKSVISKASGS------KADLFLEPGDKVSIG---DIYLEVRATPGHTAG------CVTYVTGEGADQPQPRMAFTGDA 143 (245)
T ss_dssp TCEEEEEGGGCC------CCSEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEECCSTTSCSSCEEEEETT
T ss_pred CCeEEecccccc------cCCEEcCCCCEEEEC---CEEEEEEECCCCCCC------CEEEEECCccccccccEEEECCc
Confidence 899998765421 123567889999997 223555556665322 3577776531 02489999999
Q ss_pred CCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHH----HHcCCC-EEEEeeeCCccCccc------cccccccc
Q 019221 239 VYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLA----KLLHAK-FIVPMKNGDLDSKGF------LASIIQSE 307 (344)
Q Consensus 239 ~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~----~~l~~k-~vip~H~~~f~~~~~------~~~~l~~~ 307 (344)
.+.... +..|+ + .-++++..+.+ ..+.++ .++|.|........- .+.++ .
T Consensus 144 ~~~~~~---~~~d~---~-----------~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~~~~~sti~~e~~~n~~l--~ 204 (245)
T 2gcu_A 144 VLIRGC---GRTDF---Q-----------EGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRL--T 204 (245)
T ss_dssp SBTTBC---CCCSS---T-----------TCCHHHHHHHHHHHTTTSCTTCEEEESBCSSSCCCEEHHHHHHHCTTT--T
T ss_pred cccCCc---cCCCC---C-----------CCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcCHHHHHhhCccc--C
Confidence 765321 11111 0 11345544444 445676 899999864211000 11224 2
Q ss_pred CCHHHHHHHHHhc
Q 019221 308 GTVESFKELLSKE 320 (344)
Q Consensus 308 ~~~e~~~~~~~~~ 320 (344)
...++|.+...+.
T Consensus 205 ~~~~~f~~~~~~~ 217 (245)
T 2gcu_A 205 KDKETFKTIMSNL 217 (245)
T ss_dssp SCHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhC
Confidence 5677777766654
No 51
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.23 E-value=6.2e-12 Score=111.72 Aligned_cols=167 Identities=14% Similarity=0.125 Sum_probs=99.0
Q ss_pred EEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCc
Q 019221 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (344)
Q Consensus 83 ~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~ 162 (344)
|.+.|||+|+.++..|||||..+.... ..+ .+.+..+ ...+|++|++||.|.|| .+.+..|.+ +++
T Consensus 20 ~~~~n~~li~~~~~~iLiD~G~~~~~~---~~~----~~~l~~~---~~~~i~~ii~TH~H~DH--~gg~~~l~~--~~~ 85 (227)
T 3iog_A 20 YVQENSMVYFGAKGVTVVGATWTPDTA---REL----HKLIKRV---SRKPVLEVINTNYHTDR--AGGNAYWKS--IGA 85 (227)
T ss_dssp SSCEEEEEEECSSCEEEESCCSSHHHH---HHH----HHHHHTT---CCSCEEEEECSSSSHHH--HTTHHHHHH--TTC
T ss_pred cccCcEEEEEeCCeEEEEECCCChHHH---HHH----HHHHHHh---cCCCeEEEEeCCCchhh--cChHHHHhh--CCC
Confidence 356799999999999999994321000 001 0111112 22378999999999999 678888876 489
Q ss_pred eEEEccchHHHHhhc--------------CC------ceEEeCCCceEEeCcccCCcEEEEEe-ecCCcCCCCCCCCCeE
Q 019221 163 KVIATPNAKTLLDPL--------------FQ------NVTYVEPGQSSEIEGRNGSKLRVKAT-AGPVLGPPWQRPENGY 221 (344)
Q Consensus 163 ~v~~~~~~~~~l~~~--------------~~------~i~~l~~~~~~~~~~~~~~~~~i~~~-p~~~~g~~~~~~~~g~ 221 (344)
++++++....++++. .. ....++ + .+.++ +..+++..+ ||+..| ..++
T Consensus 86 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~---~~~~~~~~~~pGHt~g------~~~~ 154 (227)
T 3iog_A 86 KVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVHD-G-DFTLQ---EGKVRAFYAGPAHTPD------GIFV 154 (227)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEES-S-CEEET---TTTEEEECCCCSSSSS------CCEE
T ss_pred eEEECHHHHHHHHHhhHHHHHHhhcCCCCCCCccccCCCEeec-C-eEEEc---CcEEEEEecCCCCCCC------cEEE
Confidence 999998876644321 00 011222 2 46676 346888776 776432 2455
Q ss_pred EEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHH--HcCCCEEEEeeeCCcc
Q 019221 222 LVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAK--LLHAKFIVPMKNGDLD 295 (344)
Q Consensus 222 vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~--~l~~k~vip~H~~~f~ 295 (344)
.+.. .+++| ||+.+...+ +... .... ....++++.++ .++++.++|.|...+.
T Consensus 155 ~~~~----~~~lf-gd~l~~~~~--------------~~~~-~~~~-~~~~~sl~~l~~~~l~~~~i~pgHg~~~~ 209 (227)
T 3iog_A 155 YFPD----EQVLY-GGCILKEKL--------------GNLS-FADV-KAYPQTLERLKAMKLPIKTVIGGHDSPLH 209 (227)
T ss_dssp EETT----TTEEE-CGGGSCSSC--------------CCCT-TCCT-THHHHHHHHHHHTCCCCSEEECSSSCCEE
T ss_pred EecC----CCEEE-cccccccCC--------------CCcC-cCCH-HHHHHHHHHHHhccCCCCEEEeCCCCCcC
Confidence 5542 36788 776543211 1000 0010 12355666666 4679999999988764
No 52
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.23 E-value=1.2e-10 Score=110.66 Aligned_cols=135 Identities=14% Similarity=0.138 Sum_probs=93.6
Q ss_pred CCccEEEecCCCCCCCChhhHHHhhhcCCCceEEEccchHHHHhhc----CCceEEeCCCceEEeCc--ccCCcEEEEEe
Q 019221 132 PQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIATPNAKTLLDPL----FQNVTYVEPGQSSEIEG--RNGSKLRVKAT 205 (344)
Q Consensus 132 p~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v~~~~~~~~~l~~~----~~~i~~l~~~~~~~~~~--~~~~~~~i~~~ 205 (344)
++||+|||||.|.||+ +++..+. ++++|+++.+..+++.. ...+..+++++.+.+.+ ...++++|+++
T Consensus 23 ~~i~ai~lTH~H~DHi--ggl~~l~----~~pVy~s~~t~~ll~~~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~v~~~ 96 (336)
T 3zdk_A 23 GTARLFFLSHMHSDHT--VGLSSTW----ARPLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDEIGQETMTVTLL 96 (336)
T ss_dssp CSSCEEECCCCCGGGS--TTCSTTC----CSCEEECHHHHHHHHHHHCCCTTTEEECCTTSEEEEESSSSSSCEEEEEEE
T ss_pred CCCCEEEECCChHHHH--CchHHHc----CCCEEecHHHHHHHHHhhhhcccceEecCCCCeEEecCcccccCCEEEEEE
Confidence 3789999999999995 6666654 58999999988876653 23578888888876620 00137999999
Q ss_pred ecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcchhhc------ccCccEEEEccccccCCCcccccCHHHHHHHHH
Q 019221 206 AGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLE------KERSDIIITPVIKQLLPKFTLVSGQEDAVKLAK 279 (344)
Q Consensus 206 p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~------~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~ 279 (344)
++.|.. ...+|+|++++ .+|+|+||+.+...... ..++|++++++... .+.. .+.+.+++.+.+.
T Consensus 97 ~~~H~~-----gs~~~~i~~~~--~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~-~~~~-~~pse~~v~~~l~ 167 (336)
T 3zdk_A 97 DANHCP-----GSVMFLFEGYF--GTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNC-NPAL-VLPSRQEAAHQIV 167 (336)
T ss_dssp ECSSST-----TCEEEEEEETT--EEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBC-CTTC-CCCCHHHHHHHHH
T ss_pred ECCCCc-----ceEEEEEEeCC--ceEEEeCCCCCCcccccchhhhccCCccEEEEecCCC-CCCC-CCCCHHHHHHHHH
Confidence 887632 24689999874 69999999998765432 24899999997322 2211 1335555555444
Q ss_pred Hc
Q 019221 280 LL 281 (344)
Q Consensus 280 ~l 281 (344)
++
T Consensus 168 ~~ 169 (336)
T 3zdk_A 168 QL 169 (336)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 53
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.23 E-value=7.8e-12 Score=114.22 Aligned_cols=160 Identities=18% Similarity=0.182 Sum_probs=100.3
Q ss_pred EEEeCc-EEEEEeC--CcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhc
Q 019221 82 TYLEGN-SWLWDLD--GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKM 158 (344)
Q Consensus 82 t~lGhs-s~li~~~--g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~ 158 (344)
..++.+ ||+|+.+ +..+|||| +... ... ..+... .+ +|++|++||.|.|| .+.+..|.++
T Consensus 7 ~~~~~n~~yli~~~~~~~~~lID~---g~~~---~i~-----~~l~~~---g~-~i~~Il~TH~H~DH--~gg~~~l~~~ 69 (254)
T 1xm8_A 7 PCLKDNYAYILHDEDTGTVGVVDP---SEAE---PII-----DSLKRS---GR-NLTYILNTHHHYDH--TGGNLELKDR 69 (254)
T ss_dssp EETTTEEEEEEECTTTCCEEEECC---SSHH---HHH-----HHHHHH---TC-CCCEEECSSCCHHH--HTTHHHHHHH
T ss_pred cccCCeEEEEEEECCCCEEEEEeC---CCHH---HHH-----HHHHHc---CC-CccEEEECCCCCcc--cccHHHHHHH
Confidence 345665 9999975 67899999 4221 111 011111 12 68999999999999 6888888876
Q ss_pred CCCceEEEccchHHHHhhcCCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCC
Q 019221 159 SPNLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHC 238 (344)
Q Consensus 159 ~p~~~v~~~~~~~~~l~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt 238 (344)
+ ++++|+++.....+.. ....+..|+++.++ +..+++..+||+..| ..+|++.. .+++|+||+
T Consensus 70 ~-~~~v~~~~~~~~~~~~---~~~~~~~g~~~~lg---~~~~~vi~tPGHt~g------~~~~~~~~----~~~lftGD~ 132 (254)
T 1xm8_A 70 Y-GAKVIGSAMDKDRIPG---IDMALKDGDKWMFA---GHEVHVMDTPGHTKG------HISLYFPG----SRAIFTGDT 132 (254)
T ss_dssp H-CCEEEEEGGGGGGSTT---EEEEECTTCEEEET---TEEEEEEECCSSSSS------CEEEEEGG----GTEEEEETT
T ss_pred c-CCeEEEchhhhhcCCC---CceeeCCCCEEEEC---CEEEEEEECCCCCCC------cEEEEECC----CCEEEEcCc
Confidence 6 6899988766544432 34568889999997 223555666765322 35676642 379999998
Q ss_pred CCcchhhcccCccEEEEccccccCCCcccccCHH---HHHHHHHHcCCC-EEEEeeeCCc
Q 019221 239 VYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQE---DAVKLAKLLHAK-FIVPMKNGDL 294 (344)
Q Consensus 239 ~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~e---ea~~~~~~l~~k-~vip~H~~~f 294 (344)
.+.... |. .+ . .+++ ++++.+..+.++ .++|.|....
T Consensus 133 l~~~~~--------------g~-~~--~--~~~~~~~~Sl~~l~~l~~~~~v~pgHg~~~ 173 (254)
T 1xm8_A 133 MFSLSC--------------GK-LF--E--GTPKQMLASLQKITSLPDDTSIYCGHEYTL 173 (254)
T ss_dssp EETTEE--------------CC-CS--S--SCHHHHHHHHHHHHTSCTTCEEEESBCCHH
T ss_pred cccCCC--------------CC-CC--C--CCHHHHHHHHHHHHccCCCcEEEeCCcchh
Confidence 654210 10 00 0 1334 444555556665 7999998643
No 54
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.23 E-value=1.7e-11 Score=112.22 Aligned_cols=178 Identities=13% Similarity=0.138 Sum_probs=105.9
Q ss_pred EEEEe---CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC--CCCCCCCCCccEEEecCCCCCCCChhhHHHh
Q 019221 81 LTYLE---GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPL 155 (344)
Q Consensus 81 it~lG---hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~L 155 (344)
+.++| .+|++|+.++..|||||..+... .-+. ..+. +++. .+||+|++||.|.|| ++.+..|
T Consensus 30 v~~ig~~~~~~~li~~~~~~iLID~G~~~~~----~~l~----~~l~~~g~~~---~~i~~IilTH~H~DH--~gg~~~l 96 (269)
T 1sml_A 30 TWQIGTEDLTALLVQTPDGAVLLDGGMPQMA----SHLL----DNMKARGVTP---RDLRLILLSHAHADH--AGPVAEL 96 (269)
T ss_dssp EEECSBTTBCCEEEEETTEEEEECCBSGGGH----HHHH----HHHHHTTCCG---GGEEEEECSCCSHHH--HTTHHHH
T ss_pred EEEecCCCcEEEEEEeCCceEEEECCCCccH----HHHH----HHHHHcCCCh---HHCcEEEeCCCCccc--cCCHHHH
Confidence 44544 57999999999999999432100 0000 0111 1222 268999999999999 6888888
Q ss_pred hhcCCCceEEEccchHHHHhhcC---------------CceEEeCCCceEEeCcccCCcEEEE--EeecCCcCCCCCCCC
Q 019221 156 SKMSPNLKVIATPNAKTLLDPLF---------------QNVTYVEPGQSSEIEGRNGSKLRVK--ATAGPVLGPPWQRPE 218 (344)
Q Consensus 156 ~~~~p~~~v~~~~~~~~~l~~~~---------------~~i~~l~~~~~~~~~~~~~~~~~i~--~~p~~~~g~~~~~~~ 218 (344)
.+++ ++++|+++....+++... .....++.++++.++ +++|+ .+|++..| .
T Consensus 97 ~~~~-~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~i~~~~~pGHt~g------~ 164 (269)
T 1sml_A 97 KRRT-GAKVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVG-----GIVFTAHFMAGHTPG------S 164 (269)
T ss_dssp HHHS-SCEEEECHHHHHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEET-----TEEEEEEECCSSSTT------C
T ss_pred HHhc-CCeEEECHHHHHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEEC-----CEEEEEEECCCCCcc------c
Confidence 8765 789999887766554320 123668888899997 55554 45554322 3
Q ss_pred CeEEEEeC-CCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeCCcc
Q 019221 219 NGYLVNSS-QGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (344)
Q Consensus 219 ~g~vi~~~-~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~ 295 (344)
.+|.++.. +++.+.++.||+.+..... .. .. +.+ +. .+ ....++++.++.+.++.++|.|.+...
T Consensus 165 ~~~~~~~~~~~~~~~l~~gD~l~~~~~~---~~-----~~-~~~-~~-~~-~~~~~sl~~l~~l~~~~l~~~H~~~~~ 230 (269)
T 1sml_A 165 TAWTWTDTRNGKPVRIAYADSLSAPGYQ---LQ-----GN-PRY-PH-LI-EDYRRSFATVRALPCDVLLTPHPGASN 230 (269)
T ss_dssp EEEEEEEEETTEEEEEEECCCCCCTTCC---CS-----SC-TTC-TT-HH-HHHHHHHHHHHTSCCSEEECSSGGGGT
T ss_pred EEEEEecccCCceeEEEEeccccCCCcc---cc-----cC-CCC-Cc-CH-HHHHHHHHHHHcCCCCEEEeCCCCccc
Confidence 57777642 2112234448986532110 00 00 100 00 00 123556677778899999999998754
No 55
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.22 E-value=2.6e-12 Score=114.57 Aligned_cols=166 Identities=11% Similarity=0.072 Sum_probs=100.7
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
.+.||++|+.++..|||||..+... ...+ ...+..+. ..+|++|++||.|.|| .+.+..|.+ ++++
T Consensus 24 ~~~n~~li~~~~~~iLiD~G~~~~~---~~~~----~~~l~~~~---~~~i~~ii~TH~H~DH--~gg~~~~~~--~~~~ 89 (233)
T 3q6v_A 24 VQENSMVYIGTDGITIIGATWTPET---AETL----YKEIRKVS---PLPINEVINTNYHTDR--AGGNAYWKT--LGAK 89 (233)
T ss_dssp SCEEEEEEECSSCEEEESCCSSHHH---HHHH----HHHHHHHC---CCCEEEEECSSSSHHH--HTTHHHHHH--TTCE
T ss_pred CCCcEEEEEeCCeEEEEECCCCHHH---HHHH----HHHHHHhc---CCCcEEEEECCCChhh--hChHHHHhh--CCCE
Confidence 3668999999899999999432100 0000 00111111 2378999999999999 688888874 4899
Q ss_pred EEEccchHHHHhhc--------------C------CceEEeCCCceEEeCcccCCcEEEEEe-ecCCcCCCCCCCCCeEE
Q 019221 164 VIATPNAKTLLDPL--------------F------QNVTYVEPGQSSEIEGRNGSKLRVKAT-AGPVLGPPWQRPENGYL 222 (344)
Q Consensus 164 v~~~~~~~~~l~~~--------------~------~~i~~l~~~~~~~~~~~~~~~~~i~~~-p~~~~g~~~~~~~~g~v 222 (344)
+++++....++++. . .....++.+ ..++ ++++++..+ |++..| ..++.
T Consensus 90 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~---~~~~~v~~~~pGHt~g------~~~~~ 158 (233)
T 3q6v_A 90 IVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGD--FNLQ---NGSIRAMYLGEAHTKD------GIFVY 158 (233)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSC--EEET---TTTEEEECCCCSSSSS------CCEEE
T ss_pred EEEcHHHHHHHHhhhHHHHHHHhccccccccccccCCCEEeCCC--eEEc---CceEEEEECCCCCCcC------cEEEE
Confidence 99998876654321 0 112234433 3343 237888877 776432 24554
Q ss_pred EEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc------CCCEEEEeeeCCcc
Q 019221 223 VNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL------HAKFIVPMKNGDLD 295 (344)
Q Consensus 223 i~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l------~~k~vip~H~~~f~ 295 (344)
+ ++ .+++| ||+.+...+ +. .+... .....++++.++.+ +++.++|.|...+.
T Consensus 159 ~--~~--~~~lf-gD~~~~~~~--------------~~-~~~~~-~~~~~~sl~~l~~l~~~~~~~~~~i~pgHg~~~~ 216 (233)
T 3q6v_A 159 F--PA--ERVLY-GNCILKENL--------------GN-MSFAN-RTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIH 216 (233)
T ss_dssp E--TT--TTEEE-CTTTSCSSC--------------CC-CTTCC-TTHHHHHHHHHHHHHHTTSSCCSEEECSSSSSEE
T ss_pred e--cc--CCEEE-CceeccccC--------------CC-CCcCC-HHHHHHHHHHHHHhhhcccCCCeEEECCCCCccC
Confidence 4 32 36788 998664321 10 01101 11347788888888 99999999987543
No 56
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.22 E-value=6.7e-12 Score=113.16 Aligned_cols=169 Identities=12% Similarity=0.134 Sum_probs=102.0
Q ss_pred EEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCc
Q 019221 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (344)
Q Consensus 83 ~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~ 162 (344)
+++.|||+|+.++..|||||.++.... .-+. +.+... ..+ +||+|++||.|.|| .+.+..|.++ ++
T Consensus 45 ~~~~n~~li~~~~~~iLID~G~~~~~~---~~l~----~~l~~~--~~~-~i~~vi~TH~H~DH--~gg~~~l~~~--~~ 110 (243)
T 4hl2_A 45 AVASNGLIVRDGGRVLVVDTAWTDDQT---AQIL----NWIKQE--INL-PVALAVVTHAHQDK--MGGMDALHAA--GI 110 (243)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH---HHHH----HHHHHH--TCC-CEEEEEECSSSHHH--HTTHHHHHHT--TC
T ss_pred cccceEEEEEECCcEEEEECCCCCccH---HHHH----HHHHHh--hCC-CeeEEEECCCCccc--cCCHHHHHhC--CC
Confidence 467899999999999999994321000 0000 000011 022 69999999999999 6888888774 79
Q ss_pred eEEEccchHHHHhhcC---C-c------eEEeCCCceEEeCcccCCcEEEE-EeecCCcCCCCCCCCCeEEEEeCCCceE
Q 019221 163 KVIATPNAKTLLDPLF---Q-N------VTYVEPGQSSEIEGRNGSKLRVK-ATAGPVLGPPWQRPENGYLVNSSQGQLT 231 (344)
Q Consensus 163 ~v~~~~~~~~~l~~~~---~-~------i~~l~~~~~~~~~~~~~~~~~i~-~~p~~~~g~~~~~~~~g~vi~~~~g~~~ 231 (344)
++|+++....+++... . . ...++.++.+.++ +++|. .+|++..| ..++.+. + .+
T Consensus 111 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-----~~~v~~~~pGHt~g------~~~~~~~--~--~~ 175 (243)
T 4hl2_A 111 ATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFG-----PLKVFYPGPGHTSD------NITVGID--G--TD 175 (243)
T ss_dssp EEEEEHHHHHHGGGTTCCCCSEEECBCTTSBBCGGGSTTCT-----TEEEECCCSSSSTT------CCEEEET--T--TT
T ss_pred eEEECHHHHHHHhcccccccccccccccceEecCCCeEEEC-----CEEEEeCCCCCCcC------CEEEEEc--C--CC
Confidence 9999988877776542 1 1 1124456666665 78874 35655322 2466654 2 47
Q ss_pred EEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHH-c-CCCEEEEeeeCC
Q 019221 232 LYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKL-L-HAKFIVPMKNGD 293 (344)
Q Consensus 232 i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~-l-~~k~vip~H~~~ 293 (344)
++|+||+.+.......+.. +..+. ....++++.+.. + ..+.++|.|...
T Consensus 176 ~lf~GD~~~~~~~~~~~~~------------~~~d~-~~~~~sl~~l~~~l~~~~~v~pgHg~~ 226 (243)
T 4hl2_A 176 IAFGGCLIKDSKAKSLGNL------------GDADT-EHYAASARAFGAAFPKASMIVMSHSAP 226 (243)
T ss_dssp EEECTTTCCCTTCSCCCCC------------TTCCT-TTHHHHHHHHHHHSTTCCEEECSSSCC
T ss_pred EEEEcceeeeccCCCcCCC------------CCCCH-HHHHHHHHHHHhhCCCceEEEeCCCCc
Confidence 9999998774221111110 11111 123556665554 4 678999999765
No 57
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.20 E-value=1.3e-11 Score=122.26 Aligned_cols=183 Identities=15% Similarity=0.157 Sum_probs=108.3
Q ss_pred CCceEEEE-----EeCcEEEEE--eCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCC
Q 019221 76 TDVFKLTY-----LEGNSWLWD--LDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCH 148 (344)
Q Consensus 76 ~~~~~it~-----lGhss~li~--~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld 148 (344)
...|.|.- ++++||+|. .++..+|||| +... -..+ ..+....+ +|++||+||.|.||+
T Consensus 22 ~~~m~i~~~~~~~~~~nsyli~~~~~~~~vlID~---g~~~--~~~~--------~~l~~~g~-~i~~Il~TH~H~DH~- 86 (466)
T 3r2u_A 22 SNAMFFKQFYDKHLSQASYLIGCQKTGEAMIIDP---IRDL--SSYI--------RVADEEGL-TITHAAETHIHADFA- 86 (466)
T ss_dssp -CCEEEEEEEETTTTEEEEEEEETTTCEEEEESC---CSCC--HHHH--------HHHHHHTC-EEEEEECSSCCSSSC-
T ss_pred CCCeEEEEEecCCccceEEEEEeCCCCEEEEEcC---CCCH--HHHH--------HHHHHCCC-eeeEEEECCCChhhh-
Confidence 34566643 368999995 4678999999 4221 0111 01111122 589999999999994
Q ss_pred hhhHHHhhhcCCCceEEEccchHHHHhhc--CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeC
Q 019221 149 LKTLKPLSKMSPNLKVIATPNAKTLLDPL--FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSS 226 (344)
Q Consensus 149 ~~tl~~L~~~~p~~~v~~~~~~~~~l~~~--~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~ 226 (344)
..+..|.+++ ++++++++.....+... ......+..+++++++ +..+++..+||+..| ..+|++...
T Consensus 87 -gg~~~l~~~~-~a~v~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g---~~~l~vi~tPGHT~g------~~~~~~~~~ 155 (466)
T 3r2u_A 87 -SGIRDVAIKL-NANIYVSGESDDTLGYKNMPNHTHFVQHNDDIYVG---NIKLKVLHTPGHTPE------SISFLLTDE 155 (466)
T ss_dssp -CCHHHHHHHH-CCEEEEECCSCTTTSCCSCCTTCEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEEECG
T ss_pred -ccHHHHHHhh-CCeEEECcchhhhhccccCCCCCEEeCCCCEEEEC---CEEEEEEECCCCCCC------CEEEEEcCC
Confidence 7788888776 79999988754433221 1256788999999997 223555556665332 368888763
Q ss_pred C---CceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCH---HHHHHHHHHcCCC-EEEEeee
Q 019221 227 Q---GQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQ---EDAVKLAKLLHAK-FIVPMKN 291 (344)
Q Consensus 227 ~---g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~---eea~~~~~~l~~k-~vip~H~ 291 (344)
+ ++.+++|+||+-+... .+..|+.--.. + +. .....+. .++++.+..+..+ .++|.|.
T Consensus 156 ~~~~~~~~~lftGD~lf~~~---~gr~dl~~~~~-~-~~--g~~~~~~~~~~~Sl~kl~~L~~~~~v~PgHg 220 (466)
T 3r2u_A 156 GAGAQVPMGLFSGDFIFVGD---IGRPDLLEKAV-K-VE--GSSEIGAKQMFKSIESIKDLPDYIQIWPGHG 220 (466)
T ss_dssp GGTCCSCCEEEEETTBCSSC---BCCCCCCCGGG-C-CT--THHHHHHHHHHHHHHHHTTSCTTCEEEESBC
T ss_pred CccCCCceEEEECCcccCCC---CCCcCcccccc-c-cC--CCchHHHHHHHHHHHHHhcCCCCeEEECCCC
Confidence 1 1356999999976532 23444320000 0 00 0000012 3444445556666 4999998
No 58
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.19 E-value=2.1e-11 Score=108.94 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=104.6
Q ss_pred EEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCc
Q 019221 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (344)
Q Consensus 83 ~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~ 162 (344)
.++.+||+|+.++..+||||.++. .. ..-+ ...+....+ +|++|++||.|.|| .+.+..|.+. ++
T Consensus 30 ~~~~n~~li~~~~~~iliD~g~~~-~~--~~~~-------~~~l~~~g~-~i~~ii~TH~H~DH--~gg~~~l~~~--~~ 94 (228)
T 1jjt_A 30 VVPKHGLVVLVNAEAYLIDTPFTA-KD--TEKL-------VTWFVERGY-KIKGSISSHFHSDS--TGGIEWLNSR--SI 94 (228)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSH-HH--HHHH-------HHHHHTTTC-EEEEEECSSSSHHH--HTTHHHHHHT--TC
T ss_pred cccceEEEEEECCcEEEEeCCCCh-hh--HHHH-------HHHHHHcCC-CeeEEEeCCCChhh--hccHHHHHhC--CC
Confidence 357899999999999999994421 00 0000 001111122 78999999999999 5777777763 78
Q ss_pred eEEEccchHHHHhhcCCc--eEEeCCCceEEeCcccCCcEEEE-EeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCC
Q 019221 163 KVIATPNAKTLLDPLFQN--VTYVEPGQSSEIEGRNGSKLRVK-ATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCV 239 (344)
Q Consensus 163 ~v~~~~~~~~~l~~~~~~--i~~l~~~~~~~~~~~~~~~~~i~-~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~ 239 (344)
++++++....+++..+.. -..++ ++.+.++ +..+++. .+||+..| ..++.+.. .+++|+||+.
T Consensus 95 ~v~~~~~~~~~~~~~~~~~~~~~~~-g~~~~l~---~~~i~~~~~~pGHt~g------~~~~~~~~----~~~lf~GD~~ 160 (228)
T 1jjt_A 95 PTYASELTNELLKKDGKVQATNSFS-GVNYWLV---KNKIEVFYPGPGHTPD------NVVVWLPE----RKILFGGCFI 160 (228)
T ss_dssp CEEEEHHHHHHHHHTTCCCCSEEEC-SSCCEEE---TTTEEEECCCCSSSTT------CCEEEETT----TTEEEEETTC
T ss_pred EEEEChHHHHHHHhcCCcCcccccc-CcceEec---CceEEEEecCCCCCCC------cEEEEECC----CcEEEEeccc
Confidence 999998887777654211 12232 5556665 3467775 67876432 24665532 3799999987
Q ss_pred CcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc--CCCEEEEeeeCCcc
Q 019221 240 YNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDLD 295 (344)
Q Consensus 240 ~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l--~~k~vip~H~~~f~ 295 (344)
+.... +.. +..+. ....++++.++.+ +++.++|.|.....
T Consensus 161 ~~~~~--------------~~~-~~~d~-~~~~~sl~~l~~~~~~~~~i~pgHg~~~~ 202 (228)
T 1jjt_A 161 KPYGL--------------GNL-GDANI-EAWPKSAKLLKSKYGKAKLVVPSHSEVGD 202 (228)
T ss_dssp CTTCC--------------CCC-TTCCT-TTHHHHHHHHHHHTTTCSEEEESSSCCBC
T ss_pred ccccc--------------Ccc-CccCH-HHHHHHHHHHHhhcCCCCEEEcCCCCcCC
Confidence 53210 100 00111 1346777878877 89999999987654
No 59
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.17 E-value=2e-11 Score=121.01 Aligned_cols=139 Identities=13% Similarity=0.152 Sum_probs=91.9
Q ss_pred CceEEEEE-----eCcEEEE--EeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCCh
Q 019221 77 DVFKLTYL-----EGNSWLW--DLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHL 149 (344)
Q Consensus 77 ~~~~it~l-----Ghss~li--~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~ 149 (344)
+.|+|..+ +++||+| +.++..|||||.. .. .-+ +..+....+ +|++||+||.|.||+
T Consensus 2 ~~m~i~~~~~~~~~~n~yli~~~~~~~~ilID~g~---~~---~~~-------~~~l~~~~~-~i~~Il~TH~H~DH~-- 65 (474)
T 3tp9_A 2 NAMYLRRFYDEGLAHASYLVGCQETGEACVIDPAR---DV---EPY-------LLTAKREGL-RIVAALETHIHADFV-- 65 (474)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTCEEEEESCCS---CC---HHH-------HHHHHHHTC-EEEEEECSSCCSSSC--
T ss_pred CceEEEEEecCCceeEEEEEEECCCCEEEEEcCCC---Ch---HHH-------HHHHHHcCC-eeEEEEcCcCchhhh--
Confidence 35666554 6899999 6678999999943 21 001 011111122 689999999999995
Q ss_pred hhHHHhhhcCCCceEEEccchHHHHhhcC---CceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeC
Q 019221 150 KTLKPLSKMSPNLKVIATPNAKTLLDPLF---QNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSS 226 (344)
Q Consensus 150 ~tl~~L~~~~p~~~v~~~~~~~~~l~~~~---~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~ 226 (344)
..+..|.+++ ++++++++.....+...+ .....+..++.+.++ +..+++..+||+..| ..+|++...
T Consensus 66 gg~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g---~~~i~~i~tPGHt~g------~~~~~~~~~ 135 (474)
T 3tp9_A 66 SGAREMADRA-GAAICVSDEGPPEWKSEYVKAYPHRLLKDGDELHFG---NVRIVVMHTPGHTPE------HVSYLLYDG 135 (474)
T ss_dssp CCHHHHHHHH-CCEEEEECCSCGGGCCGGGGGSSEEEECTTCEEEET---TEEEEEEECCSSSSS------CEEEEEEET
T ss_pred CCHHHHHHHH-CCcEEEcCcchhhhcccccccccceECCCCCEEEEC---CEEEEEEECCCCCCC------CEEEEEecC
Confidence 7788887765 799999887655443321 234778999999997 223555556665332 368888765
Q ss_pred CC---ceEEEEcCCCCCc
Q 019221 227 QG---QLTLYYEPHCVYN 241 (344)
Q Consensus 227 ~g---~~~i~~sGDt~~~ 241 (344)
++ ..+++|+||+-+.
T Consensus 136 ~~~~~~~~~lftGD~lf~ 153 (474)
T 3tp9_A 136 KTSPDVPMALFSGDFVFV 153 (474)
T ss_dssp TTEEEEEEEEEEETSEET
T ss_pred CCCCCCceEEEeCCcccc
Confidence 31 1279999999754
No 60
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.17 E-value=9e-11 Score=107.42 Aligned_cols=140 Identities=15% Similarity=0.164 Sum_probs=85.2
Q ss_pred EEEEeCcEEEEEeCCcEEEEccccCCCCC-CCcccc---cccCC---cccC--CCCCCCCCCccEEEecCCCCCCCChhh
Q 019221 81 LTYLEGNSWLWDLDGVKVLVDPILVGNLD-FGIPWL---FDAGK---KFLK--SFQLSDLPQVDCLLITQSLDDHCHLKT 151 (344)
Q Consensus 81 it~lGhss~li~~~g~~ILiDP~~~g~~s-~p~~~~---~~~~~---~~~~--~~~~~~lp~iD~VlISH~H~DHld~~t 151 (344)
...++.+||||+.++..|||||..+.... .+..|. ..... +.+. ++++ .+||+|+|||.|+||+ +.
T Consensus 30 ~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~i~~VilTH~H~DH~--gg 104 (274)
T 3aj3_A 30 EVRFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEP---RDIDVVVNSHFHFDHC--GG 104 (274)
T ss_dssp EEEEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCG---GGCCEEECSCCSGGGT--TT
T ss_pred EEEeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCH---HHCCEEEecCcCcccC--Cc
Confidence 34677899999999999999995432100 000000 00000 0111 1222 2689999999999995 66
Q ss_pred HHHhhhcCCCceEEEccchHHHHhhc----------------------------------CCceEEeCCCceEEeCcccC
Q 019221 152 LKPLSKMSPNLKVIATPNAKTLLDPL----------------------------------FQNVTYVEPGQSSEIEGRNG 197 (344)
Q Consensus 152 l~~L~~~~p~~~v~~~~~~~~~l~~~----------------------------------~~~i~~l~~~~~~~~~~~~~ 197 (344)
+..| +++++|+++.....+... ..++..++ +.++++ +
T Consensus 105 ~~~~----~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~---g 175 (274)
T 3aj3_A 105 NKYF----PHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGID--GDVDLA---R 175 (274)
T ss_dssp GGGC----TTSEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEEC--SSEEEE---T
T ss_pred hhhC----CCCEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcC--CccccC---C
Confidence 6655 378999988776543210 01334444 245665 2
Q ss_pred CcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcc
Q 019221 198 SKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ 242 (344)
Q Consensus 198 ~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~ 242 (344)
.+++..+||+..| ..+++++.++ +.+++|+||+.+..
T Consensus 176 -~~~v~~~pGHt~g------~~~~~~~~~~-~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 176 -GVKLISTPGHSIG------HYSLLVEFPR-RKPILFTIDAAYTQ 212 (274)
T ss_dssp -TEEEEECTTSSTT------CEEEEECCSS-SCCEEEEETTCSSH
T ss_pred -EEEEEECCCCCce------eeEEEEECCC-CCEEEEEechhhhH
Confidence 4999888885433 3688887642 25899999998865
No 61
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.15 E-value=6.3e-11 Score=111.38 Aligned_cols=143 Identities=15% Similarity=0.100 Sum_probs=86.1
Q ss_pred CceEEEEE---eC-cEEEEEe--CCcEEEEccccCCCCCCCcccccccCCcccCCCCCC-CCCCccEEEecCCCCCCCCh
Q 019221 77 DVFKLTYL---EG-NSWLWDL--DGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLS-DLPQVDCLLITQSLDDHCHL 149 (344)
Q Consensus 77 ~~~~it~l---Gh-ss~li~~--~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~-~lp~iD~VlISH~H~DHld~ 149 (344)
..|+|.-+ +. +||+|+. ++..+||||... ...-..++ ++.+..+.+. ...+|++||+||.|+|| .
T Consensus 27 ~~m~i~~i~~~~~n~~ylI~~~~~~~~ilID~G~~--~~~~~~~l----~~~l~~~g~~~~~~~i~~IllTH~H~DH--~ 98 (311)
T 2p18_A 27 SAFSVTVVPTLKDNFSYLINDHTTHTLAAVDVNAD--YKPILTYI----EEHLKQQGNADVTYTFSTILSTHKHWDH--S 98 (311)
T ss_dssp TTEEEEEEEETTTEEEEEEEETTTTEEEEESCCSC--CHHHHHHH----HHTC--------CCEEEEEEESSSSHHH--H
T ss_pred CCcEEEEEecCCCcEEEEEEeCCCCcEEEEeCCCC--hHHHHHHH----HHHHhhcCCCCCCCCccEEEeCCCCccc--c
Confidence 44555443 33 4999998 578999999321 10001111 0111101110 01278999999999999 5
Q ss_pred hhHHHhhhcCC------CceEEEccchHHHHhhcCCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEE
Q 019221 150 KTLKPLSKMSP------NLKVIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLV 223 (344)
Q Consensus 150 ~tl~~L~~~~p------~~~v~~~~~~~~~l~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi 223 (344)
+.+..|.++++ ++++|++.... .......+..|+++.++ +..+++..+|++..| ..+|++
T Consensus 99 gg~~~l~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~l~~g~~l~lg---~~~l~vi~tPGHT~g------~i~~~~ 164 (311)
T 2p18_A 99 GGNAKLKAELEAMNSTVPVVVVGGANDS-----IPAVTKPVREGDRVQVG---DLSVEVIDAPCHTRG------HVLYKV 164 (311)
T ss_dssp TTHHHHHHHHHSCC--CCCEEEEEGGGT-----CTTCSEEECTTCEEEET---TEEEEEEECCSSSTT------CEEEEE
T ss_pred CCHHHHHHhhhhcccCCCCEEEEechhc-----CCCCceEeCCCCEEEEC---CeEEEEEECCCCCcc------cEEEEE
Confidence 78888877643 57888775431 11234667889999997 224555666765432 368888
Q ss_pred EeCC-Cce-EEEEcCCCCCc
Q 019221 224 NSSQ-GQL-TLYYEPHCVYN 241 (344)
Q Consensus 224 ~~~~-g~~-~i~~sGDt~~~ 241 (344)
+.++ .+. +++|+||+.+.
T Consensus 165 ~~~~~~~~~~~lftGD~l~~ 184 (311)
T 2p18_A 165 QHPQHPNDGVALFTGDTMFI 184 (311)
T ss_dssp ECTTCGGGCEEEEEETTEET
T ss_pred ecCCcCCcCCEEEEcCcccc
Confidence 7552 015 89999999764
No 62
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.15 E-value=4.7e-11 Score=109.40 Aligned_cols=170 Identities=12% Similarity=0.078 Sum_probs=103.7
Q ss_pred EEeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCc
Q 019221 83 YLEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNL 162 (344)
Q Consensus 83 ~lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~ 162 (344)
.++.+||+|+.++..|||||..+. .. ...+. ..+... ... +||+|++||.|.|| .+.+..+.+. ++
T Consensus 65 ~~~~n~~li~~~~~~iLID~G~~~-~~--~~~l~----~~l~~~--~g~-~i~~VilTH~H~DH--~gg~~~~~~~--~a 130 (265)
T 2y8b_A 65 VYSSNGLIVRDADELLLIDTAWGA-KN--TVALL----AEIEKQ--IGL-PVTRSISTHFHDDR--VGGVDVLRAA--GV 130 (265)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSH-HH--HHHHH----HHHHHH--TCS-CEEEEECSSSSHHH--HTTHHHHHHT--TC
T ss_pred cccceEEEEEECCeEEEEeCCCCH-HH--HHHHH----HHHHHh--cCC-CeEEEEeCCCChhh--cCCHHHHhhC--CC
Confidence 467899999999999999994320 00 00000 001111 012 68999999999999 5777777763 79
Q ss_pred eEEEccchHHHHhhcCC--ceEEe----CCCceEEeCcccCCcEEE-EEeecCCcCCCCCCCCCeEEEEeCCCceEEEEc
Q 019221 163 KVIATPNAKTLLDPLFQ--NVTYV----EPGQSSEIEGRNGSKLRV-KATAGPVLGPPWQRPENGYLVNSSQGQLTLYYE 235 (344)
Q Consensus 163 ~v~~~~~~~~~l~~~~~--~i~~l----~~~~~~~~~~~~~~~~~i-~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~s 235 (344)
++|+++....+++.... .-..+ +.++++.++ ++++ ..+||+..| ..++.++. .+++|+
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~v~~~~pGHt~g------~~~~~~~~----~~~lf~ 195 (265)
T 2y8b_A 131 ATYTSPLTRQLAEAAGNEVPAHSLKALSSSGDVVRFG-----PVEVFYPGAAHSGD------NLVVYVPA----VRVLFG 195 (265)
T ss_dssp EEEECHHHHHHHHHTTCCCCSEECSSCSSTTEEEEET-----TEEEEECCSSSSTT------CCEEEETT----TTEEEE
T ss_pred eEEECHHHHHHHHhcccccccccccccCCCCcEEeec-----CEEEEecCCCCCCC------CEEEEecC----CCEEEE
Confidence 99999888776654321 11222 456666665 7888 567876433 25666642 379999
Q ss_pred CCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc--CCCEEEEeeeCCc
Q 019221 236 PHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNGDL 294 (344)
Q Consensus 236 GDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l--~~k~vip~H~~~f 294 (344)
||+.+....... +.. ...+. ....++++.+..+ +.+.++|.|...+
T Consensus 196 GD~~~~~~~~~~-----------~~~-~~~d~-~~~~~sl~~l~~~~~~~~~v~pgHg~~~ 243 (265)
T 2y8b_A 196 GCAVHEASRESA-----------GNV-ADANL-AEWPATIKRIQQRYPEAEVVIPGHGLPG 243 (265)
T ss_dssp ETTSCCTTCCSC-----------CCC-TTCCT-TTHHHHHHHHHHHCTTCSEEEESSSCCB
T ss_pred ccccccCCCccc-----------CcC-CcCCH-HHHHHHHHHHHhhCCCCCEEECCCCCCC
Confidence 998765311000 100 00010 1235666666666 7899999997654
No 63
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.12 E-value=1e-10 Score=107.12 Aligned_cols=157 Identities=13% Similarity=0.095 Sum_probs=97.3
Q ss_pred CcEEEEEeC--CcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 86 GNSWLWDLD--GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 86 hss~li~~~--g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
.+||+|..+ +..+|||| |... ... ..+.. ..+ ++++||+||.|+|| .+.+..|.+++|+++
T Consensus 12 n~~yli~~~~~~~~vlID~---G~~~---~i~-----~~l~~---~g~-~i~~IllTH~H~DH--~gg~~~l~~~~~~~~ 74 (260)
T 1qh5_A 12 NYMYLVIDDETKEAAIVDP---VQPQ---KVV-----DAARK---HGV-KLTTVLTTHHHWDH--AGGNEKLVKLESGLK 74 (260)
T ss_dssp EEEEEEEETTTTEEEEESC---SSHH---HHH-----HHHHH---HTC-EEEEEECCCSSHHH--HTTHHHHHHHSTTCE
T ss_pred eEEEEEEECCCCEEEEEcC---CCHH---HHH-----HHHHH---cCC-CccEEEeCCCCccc--cCCHHHHHHHCCCCE
Confidence 348999984 68999999 4221 011 01111 122 48999999999999 688888988877799
Q ss_pred EEEccchHHHHhhcCCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEE-EeCCCceEEEEcCCCCCcc
Q 019221 164 VIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLV-NSSQGQLTLYYEPHCVYNQ 242 (344)
Q Consensus 164 v~~~~~~~~~l~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi-~~~~g~~~i~~sGDt~~~~ 242 (344)
+|++.... ......+..|+.+.++ +..+++..+||+..| ..+|++ +....+.+++|+||+.+..
T Consensus 75 v~~~~~~~------~~~~~~~~~g~~~~~g---~~~~~vi~tPGHt~g------~~~~~~~~~~~~~~~~lftGD~l~~~ 139 (260)
T 1qh5_A 75 VYGGDDRI------GALTHKITHLSTLQVG---SLNVKCLATPCHTSG------HICYFVSKPGGSEPPAVFTGDTLFVA 139 (260)
T ss_dssp EEESCTTS------TTCSEECCTTCEEEET---TEEEEEEECCSSSTT------CEEEEEECSSSSSCCEEEEETTEETT
T ss_pred EEECcccC------CCCCEEeCCCCEEEEC---CEEEEEEECCCCCCC------CEEEEEeccCCCCCCEEEEcCccccC
Confidence 99876421 1234567888999997 223555566765332 357777 3310135899999986542
Q ss_pred hhhcccCccEEEEccccccCCCcccccCHHHHHHHH----HHcCCC-EEEEeeeCC
Q 019221 243 NFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLA----KLLHAK-FIVPMKNGD 293 (344)
Q Consensus 243 ~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~----~~l~~k-~vip~H~~~ 293 (344)
.. |.. + ..++++..+.+ ..+..+ .++|.|..+
T Consensus 140 ~~--------------g~~-~----~~~~~~~~~Sl~~~l~~l~~~~~v~pgHg~~ 176 (260)
T 1qh5_A 140 GC--------------GKF-Y----EGTADEMCKALLEVLGRLPPDTRVYCGHEYT 176 (260)
T ss_dssp EE--------------CCC-T----TCCHHHHHHHHHTTTTTSCTTCEEEESBCCH
T ss_pred Cc--------------CCC-C----CCCHHHHHHHHHHHHHcCCCCeEEEcCCCch
Confidence 11 210 0 11456655554 345666 588999864
No 64
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.07 E-value=1.4e-10 Score=103.20 Aligned_cols=166 Identities=13% Similarity=0.076 Sum_probs=100.5
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC--CCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCC
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK--SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPN 161 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~--~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~ 161 (344)
.+.|||+|+.++..|||||..+. . ..-+ .+.+. ++++ .+||+|+|||.|+|| .+.+..|. +
T Consensus 33 ~~~n~~li~~~~~~iLID~G~~~--~--~~~l----~~~l~~~g~~~---~~i~~ViiTH~H~DH--~gg~~~~~----~ 95 (221)
T 1ztc_A 33 HFSTVVYLEHKDRRIIIDPGNLS--S--MDEL----EEKFSELGISP---DDITDVLFTHVHLDH--IFNSVLFE----N 95 (221)
T ss_dssp CBCCEEEEEETTEEEEECCCCGG--G--HHHH----HHHHHHHTCCG---GGCCEEECSCCCHHH--HGGGGGCT----T
T ss_pred CceEEEEEEeCCeEEEEECCCCc--c--hHHH----HHHHHHcCCCH---HHCcEEEEcCCcccc--CCchhhCC----C
Confidence 45789999999999999994321 0 0001 01111 2222 268999999999999 57776665 5
Q ss_pred ceEEEccchHH-HHhhc--------------CCceEEeCCCceEEeCcccCCcEEEEEeecCCcCCCCCCCCCeEEEEeC
Q 019221 162 LKVIATPNAKT-LLDPL--------------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVLGPPWQRPENGYLVNSS 226 (344)
Q Consensus 162 ~~v~~~~~~~~-~l~~~--------------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~ 226 (344)
+++|+++.... .++.+ ..++..++.++++. + +++++..+|++..| ..+|+++.+
T Consensus 96 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~----~~~~v~~~pGHt~g------~~~~~~~~~ 164 (221)
T 1ztc_A 96 ATFYVHEVYKTKNYLSFGTIVGRIYSKVISSWKNVVLLKGEESLF-D----EKVKVFHTPWHARE------HLSFLLDTE 164 (221)
T ss_dssp CEEEEEGGGGGSCGGGGCHHHHHHHHHHHHTCCSEEEECSCCEET-T----TTEEEEECCSSSTT------CEEEEEEET
T ss_pred CEEEEeHHHhhhhhhhhccchhhhhhhccccccceEEeCCCCEEE-C----CeEEEEEcCCCCcc------cEEEEEEcC
Confidence 88888776211 11111 14567777776653 2 37999888876433 368888876
Q ss_pred CCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCH-HHHHHHHHHcCCCEEEEeeeCCcc
Q 019221 227 QGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQ-EDAVKLAKLLHAKFIVPMKNGDLD 295 (344)
Q Consensus 227 ~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~-eea~~~~~~l~~k~vip~H~~~f~ 295 (344)
+ +.+++|+||+.+...-. . +. .+|. . ... ..+++. +.+ ++.++|.|...+.
T Consensus 165 ~-~~~vlftGD~~~~~~~~----~-----d~-~~~~---~--s~~~~~~l~~-~~l-~~~i~pgHg~~~~ 216 (221)
T 1ztc_A 165 N-AGRVLITGDITPNRLSY----Y-----DI-IKGY---G--SVQVKNFLDR-VGR-IDLLVFPHDAPLK 216 (221)
T ss_dssp T-TEEEEECGGGSCSHHHH----H-----HH-HHTC---S--CHHHHHHHHH-HCC-CSEEECSSSCCBC
T ss_pred C-CCeEEEEeCcccccccC----C-----CH-HHHH---h--hhHhHHHHHh-ccC-CCEEEeCCCchHh
Confidence 3 25899999998754210 0 00 1111 1 111 112444 445 8999999987655
No 65
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.05 E-value=7.7e-11 Score=106.09 Aligned_cols=166 Identities=13% Similarity=0.055 Sum_probs=98.1
Q ss_pred eCcEEEEEeC-CcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 85 EGNSWLWDLD-GVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 85 Ghss~li~~~-g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
+.|||+|+.+ +..+||||..+.... .-+. ..+... . ....+ +|++||.|.|| .+.+..|.+ + +++
T Consensus 29 ~~n~~li~~~~~~~iLiD~G~~~~~~---~~l~----~~l~~~-~-~~~~~-~vi~TH~H~DH--~gg~~~l~~-~-~~~ 94 (246)
T 2fhx_A 29 SSNVLVAKMLDGTVVIVSSPFENLGT---QTLM----DWVAKT-M-KPKKV-VAINTHFHLDG--TGGNEIYKK-M-GAE 94 (246)
T ss_dssp TEEEEEEECTTSEEEEESCCSSHHHH---HHHH----HHHHHH-H-CCSEE-EEECCSSSHHH--HTTHHHHHH-T-TCE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCHHHH---HHHH----HHHHHh-c-CCCcE-EEEeCCCCccc--cChHHHHhh-c-CCE
Confidence 4689999975 468999994321000 0000 001110 0 11234 79999999999 577777776 3 789
Q ss_pred EEEccchHHHHhhc----------------------------CCceEEeCCCceEEeCcccCCcEEEEE---eecCCcCC
Q 019221 164 VIATPNAKTLLDPL----------------------------FQNVTYVEPGQSSEIEGRNGSKLRVKA---TAGPVLGP 212 (344)
Q Consensus 164 v~~~~~~~~~l~~~----------------------------~~~i~~l~~~~~~~~~~~~~~~~~i~~---~p~~~~g~ 212 (344)
+++++....+++.. ..++..+..+++++++ +.++++ +||+..|
T Consensus 95 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-----~~~i~~~~~~pGHt~g- 168 (246)
T 2fhx_A 95 TWSSDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFS-----NELVEVSFPGPAHSPD- 168 (246)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEET-----TEEEEEECCCCSSSTT-
T ss_pred EEEcHHHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEEC-----CEEEEEEeCCCCCCCC-
Confidence 99988765543210 0133457778888887 545544 4555322
Q ss_pred CCCCCCCeEEEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEeeeC
Q 019221 213 PWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMKNG 292 (344)
Q Consensus 213 ~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H~~ 292 (344)
..++.+. + .+++|+||+.+.... + +.+.... ....++++.++.++++.++|.|..
T Consensus 169 -----~~~~~~~--~--~~~lf~GD~~~~~~~--------------~-~~~~~~~-~~~~~sl~~l~~l~~~~i~pgHg~ 223 (246)
T 2fhx_A 169 -----NVVVYFP--K--KKLLFGGCMIKPKEL--------------G-YLGDANV-KAWPDSARRLKKFDAKIVIPGHGE 223 (246)
T ss_dssp -----CCEEEET--T--TTEEEEETTCCSSCC--------------C-CCTTCCT-TTHHHHHHHGGGSCCSEEEESBSC
T ss_pred -----CEEEEEc--C--CCEEEECCEeccCCC--------------C-CCCCCCH-HHHHHHHHHHHhCCCCEEECCCCC
Confidence 2455553 2 489999998764211 1 0010111 134667777777899999999987
Q ss_pred Ccc
Q 019221 293 DLD 295 (344)
Q Consensus 293 ~f~ 295 (344)
.+.
T Consensus 224 ~~~ 226 (246)
T 2fhx_A 224 WGG 226 (246)
T ss_dssp CBS
T ss_pred cCC
Confidence 643
No 66
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.04 E-value=1.2e-09 Score=95.70 Aligned_cols=159 Identities=18% Similarity=0.213 Sum_probs=98.3
Q ss_pred EeCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 84 LEGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 84 lGhss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
++.+||+|+.++..+|||| |... . ... +. ++++.+|++|++||. ||+ +.+..+.+++ +++
T Consensus 22 ~~~n~~li~~~~~~iliD~---g~~~-~-~~~-----~~-----l~~~g~i~~ii~TH~--DH~--gg~~~~~~~~-~a~ 81 (201)
T 2p97_A 22 IDFNGFAWIRPEGNILIDP---VALS-N-HDW-----KH-----LESLGGVVWIVLTNS--DHV--RSAKEIADQT-YTK 81 (201)
T ss_dssp EEEEEEEECCTTCCEEESC---CCCC-H-HHH-----HH-----HHHTTCCSEEECSSG--GGC--TTHHHHHHHS-CCE
T ss_pred cceeEEEEEeCCeeEEEEC---CCCc-H-HHH-----HH-----HHhcCCCCEEEECCc--hhh--hhHHHHHHhc-CCE
Confidence 4789999999888999999 4211 0 111 11 112237999999999 995 7788888776 589
Q ss_pred EEEccchHHHHhhcCCceEEeCCCceEEeCcccCCcEEEEEee-cCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcc
Q 019221 164 VIATPNAKTLLDPLFQNVTYVEPGQSSEIEGRNGSKLRVKATA-GPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQ 242 (344)
Q Consensus 164 v~~~~~~~~~l~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~~p-~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~ 242 (344)
+++++.....++.. ....++.++++ . .++++..+| ++..| ..+|.++ + +++|+||+.+..
T Consensus 82 v~~~~~~~~~~~~~--~~~~~~~g~~~--~----~~~~~~~~p~gHt~g------~~~~~~~----~-~~lf~GD~~~~~ 142 (201)
T 2p97_A 82 IAGPVAEKENFPIY--CDRWLSDGDEL--V----PGLKVMELQGSKTPG------ELALLLE----E-TTLITGDLVRAY 142 (201)
T ss_dssp EEEEGGGTTSCSSC--CSEEECTTCBS--S----TTEEEEEECSSSSTT------EEEEEET----T-TEEEECSSEEBS
T ss_pred EEEcHhHhhhhccc--CceecCCCCEE--c----ceEEEEECCCCCCCC------cEEEEEc----C-CEEEECcccccc
Confidence 99988765544321 13456666654 2 269999999 65322 2455543 2 799999987653
Q ss_pred hhhcccCccEEEEccccccCCCcccccCHHH---HHHHHHH-cCCCEEEEeeeCCc
Q 019221 243 NFLEKERSDIIITPVIKQLLPKFTLVSGQED---AVKLAKL-LHAKFIVPMKNGDL 294 (344)
Q Consensus 243 ~~~~~~~~Dl~il~~~g~~~~~~~~h~~~ee---a~~~~~~-l~~k~vip~H~~~f 294 (344)
. .+..+ +.+ +.+ ..+.++ +++.++. ++++.++|.|...+
T Consensus 143 ~---~g~~~--~~~------~~~--~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~~ 185 (201)
T 2p97_A 143 R---AGGLE--ILP------DEK--LMNKQKVVASVRRLAALEKVEAVLVGDGWSV 185 (201)
T ss_dssp S---TTSCE--ECC------GGG--CSCHHHHHHHHHHHHTCTTCCEEEESBBCCB
T ss_pred C---CCccc--cCC------ccc--cCCHHHHHHHHHHHHhcCCCCEEEeCCCcce
Confidence 1 11111 000 011 114444 4455555 57899999998654
No 67
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.03 E-value=4e-10 Score=104.38 Aligned_cols=204 Identities=14% Similarity=0.128 Sum_probs=111.1
Q ss_pred cEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCceEEE
Q 019221 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIA 166 (344)
Q Consensus 87 ss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v~~ 166 (344)
+|++|+.++.+||||+..+ . .+. +.+..+.. +..+||+|++||.|+|| .+.+..+.++++++++|+
T Consensus 34 ~s~li~~~~~~iLiD~G~~---~---~~~-----~~l~~~g~-~~~~i~~v~lTH~H~DH--~ggl~~~~~~~~~~~v~~ 99 (284)
T 2p4z_A 34 LSLLLKKGNKEIVVDTGQS---E---NFI-----KNCGLMGI-DVGRIKKVVLTHGHYDH--IGGLKGLLERNPEVKIYT 99 (284)
T ss_dssp CEEEEEETTEEEEECCCSS---T---HHH-----HHHHHTTC-CGGGCCEEECCCSCHHH--HTTHHHHHHHCTTCEEEE
T ss_pred EEEEEEECCeEEEEeCCCC---H---HHH-----HHHHHcCC-ChhhCCEEEECCCCchh--hccHHHHHHHcCCCceec
Confidence 5899999999999999332 1 011 11111111 22378999999999999 577877776666899998
Q ss_pred ccchHH-HHhhc--------C----------CceEEeCCCceEEeCcccCCc-EEEEEeecCCcCCCCCCCCCeEEEEeC
Q 019221 167 TPNAKT-LLDPL--------F----------QNVTYVEPGQSSEIEGRNGSK-LRVKATAGPVLGPPWQRPENGYLVNSS 226 (344)
Q Consensus 167 ~~~~~~-~l~~~--------~----------~~i~~l~~~~~~~~~~~~~~~-~~i~~~p~~~~g~~~~~~~~g~vi~~~ 226 (344)
++.... .+... + .++..++ +..++. .+ +.+..+|.+|..... ....|.++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~----~gi~~i~~~~~~h~~~~~--~g~~~~~~~- 170 (284)
T 2p4z_A 100 HKEILNKKYAMRKGGQFEEIGFDLSFYEKYKNNFVLID--KDAEIE----EGFYVITNTDITYDNEFT--TKNFFVEKE- 170 (284)
T ss_dssp EGGGGSCEEEECSSSCEEECSCCHHHHHHHGGGEEEES--SCEEEE----TTEEEECSCCCCSCCHHH--HTTEEEEET-
T ss_pred CHHHHHHHhccCccccccccccccchhhhcCceEEEeC--CCeEEe----CCEEEEeeeCCccccccC--CCceEEEcC-
Confidence 877643 11100 0 1333333 234443 13 333334443321100 001255542
Q ss_pred CCceEEEEcCCCCCcchhhc-ccCcc--EEEEccc-----c--cc----CC--C-----ccccc------CHHHHHHHHH
Q 019221 227 QGQLTLYYEPHCVYNQNFLE-KERSD--IIITPVI-----K--QL----LP--K-----FTLVS------GQEDAVKLAK 279 (344)
Q Consensus 227 ~g~~~i~~sGDt~~~~~~~~-~~~~D--l~il~~~-----g--~~----~~--~-----~~~h~------~~eea~~~~~ 279 (344)
+.|++|+ +.++... ....| +++..|+ . .| .+ . .-.|+ ..+++++.++
T Consensus 171 -----~~y~~D~-~~de~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~~~~ 244 (284)
T 2p4z_A 171 -----GKRIPDK-FLDEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIE 244 (284)
T ss_dssp -----TEEEECC-CTTCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred -----CCEecCC-CCCceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHHHHH
Confidence 2356674 3322221 23456 4454431 0 01 11 1 12377 7899999999
Q ss_pred HcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 280 LLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 280 ~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
.+++|+++++|...+. ..+.+++.+. .++.....|.++++
T Consensus 245 ~~~~~~l~l~H~~~~~-------------~~~~~~~~~~-----~~v~~a~~G~~i~l 284 (284)
T 2p4z_A 245 EYGVKKVLTGHCTGID-------------EYGFLKSVLK-----DKISYLTTSSSIVV 284 (284)
T ss_dssp HTTBCCEEECGGGCHH-------------HHHHHHHHHG-----GGEEECCTTCEEEC
T ss_pred cCCCCEEEeeCcCcHH-------------HHHHHHHHhC-----CCEEEcCCCcEEeC
Confidence 9999999999987532 1233333332 24556668888764
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.91 E-value=4.8e-10 Score=102.96 Aligned_cols=165 Identities=15% Similarity=0.137 Sum_probs=93.5
Q ss_pred eCcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCC-CCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCce
Q 019221 85 EGNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQ-LSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLK 163 (344)
Q Consensus 85 Ghss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~-~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~ 163 (344)
+.|||+|..++..+||||.++.... ++.+..+. ..++ +|++|++||.|.|| .+.+..|.+. +++
T Consensus 74 ~~N~ylv~~~~~~ilIDtg~~~~~~----------~~l~~~i~~~~~~-~I~~Ii~TH~H~DH--~gg~~~l~~~--~~~ 138 (270)
T 4eyb_A 74 ASNGLIVRDGGRVLVVDTAWTDDQT----------AQILNWIKQEINL-PVALAVVTHAHQDK--MGGMDALHAA--GIA 138 (270)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHH----------HHHHHHHHHHTCC-CEEEEEECSSSHHH--HTTHHHHHHT--TCE
T ss_pred ceEEEEEEECCEEEEEeCCCCHHHH----------HHHHHHHHHhcCC-ceEEEEeCCCChhh--cCcHHHHHHC--CCe
Confidence 4689999999999999994431100 00001010 1122 68999999999999 6888888875 799
Q ss_pred EEEccchHHHHhhcC----CceEE------eCCCceEEeCcccCCcEEEE-EeecCCcCCCCCCCCCeEEEEeCCCceEE
Q 019221 164 VIATPNAKTLLDPLF----QNVTY------VEPGQSSEIEGRNGSKLRVK-ATAGPVLGPPWQRPENGYLVNSSQGQLTL 232 (344)
Q Consensus 164 v~~~~~~~~~l~~~~----~~i~~------l~~~~~~~~~~~~~~~~~i~-~~p~~~~g~~~~~~~~g~vi~~~~g~~~i 232 (344)
+++++....+++..+ ..... ++.+..... +++++. ..|++.. .+.++-.++ .++
T Consensus 139 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~pgHT~--------g~~~~~~~~--~~v 203 (270)
T 4eyb_A 139 TYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNF-----GPLKVFYPGPGHTS--------DNITVGIDG--TDI 203 (270)
T ss_dssp EEEEHHHHHHGGGGTCCCCSEEECBCTTSBBCGGGSTTC-----TTEEEECCCSSSSS--------SCCEEEETT--SSE
T ss_pred EEECHHHHHHHHhcCccccccccCCCCceeecCceeeec-----CceeEEecccccCC--------CCEEEEecC--CcE
Confidence 999988877776542 11111 111112222 245443 2355432 222333342 489
Q ss_pred EEcCCCCCcchhhcccCccEEEEccccccCCCcccccCHHHHHHHHHHc--CCCEEEEeeeC
Q 019221 233 YYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLL--HAKFIVPMKNG 292 (344)
Q Consensus 233 ~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l--~~k~vip~H~~ 292 (344)
+|+||+.+....... + +.+..++ ....++++.++.. .+++++|.|..
T Consensus 204 LfsGD~l~~~~~~~~-----------~-~~~~~~~-~~~~~Sl~~l~~~~~d~~~v~PGHG~ 252 (270)
T 4eyb_A 204 AFGGCLIKDSKAKSL-----------G-NLGDADT-EHYAASARAFGAAFPKASMIVMSHSA 252 (270)
T ss_dssp EECTTTCCCTTCSCC-----------C-CCTTCCT-TTHHHHHHHHHHHSTTCCEEECSSSC
T ss_pred EEEeCeecCCCCCCc-----------C-CCCCCCH-HHHHHHHHHHHhhCCCCcEEEcCCCC
Confidence 999998764322110 0 1111111 1235666666654 67899999965
No 69
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.66 E-value=1.2e-08 Score=105.01 Aligned_cols=171 Identities=12% Similarity=0.090 Sum_probs=97.9
Q ss_pred CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccC-CCCCCCCCCccEEEecCCCCCCCChhhHHHhhhc----CC
Q 019221 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLK-SFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKM----SP 160 (344)
Q Consensus 86 hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~-~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~----~p 160 (344)
.|||+|+.++..|||||..+.... ...+ +.+. .+. ..+|++|++||.|.|| ++.+..|.+. .+
T Consensus 123 ~N~ylI~~~~g~iLIDtG~~~~~a--~~~l-----~~i~~~~~---~~~I~~IIlTH~H~DH--~GG~~~l~~~~~~~~~ 190 (658)
T 2cfu_A 123 ANITFIRGDSGWIVVDTLTTPATA--RAAY-----ELVSRELG---ERPIRTVIYSHAHADH--FGGVRGLVEPQQVASG 190 (658)
T ss_dssp SCEEEEECSSSEEEECCCSSHHHH--HHHH-----HHHHHHHC---CCCEEEEECSBSCHHH--HTTGGGTCCHHHHHTT
T ss_pred eEEEEEEECCEEEEEECCCCHHHH--HHHH-----HHHHhhCC---CCCceEEEECCCChhh--hCCHHHHHhhhhccCC
Confidence 589999988889999994431000 0000 0000 011 1378999999999999 5777777642 35
Q ss_pred CceEEEccchHHHHh----------------hcCC---------------------------ceEEe-CCCceEEeCccc
Q 019221 161 NLKVIATPNAKTLLD----------------PLFQ---------------------------NVTYV-EPGQSSEIEGRN 196 (344)
Q Consensus 161 ~~~v~~~~~~~~~l~----------------~~~~---------------------------~i~~l-~~~~~~~~~~~~ 196 (344)
+++||+++....++. .++. ....+ +.++++.++
T Consensus 191 ~a~V~a~~~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lg--- 267 (658)
T 2cfu_A 191 AVQIIAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLD--- 267 (658)
T ss_dssp SSEEEEETTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEET---
T ss_pred CCEEEEchhHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEEC---
Confidence 899999887543221 0010 11334 467777887
Q ss_pred CCcEEEEEeecCCcCCCCCCCCCeEEEEeCCCceEEEEcCCCCCcchhhcccCccEEEEccccccCCCcccccCH---HH
Q 019221 197 GSKLRVKATAGPVLGPPWQRPENGYLVNSSQGQLTLYYEPHCVYNQNFLEKERSDIIITPVIKQLLPKFTLVSGQ---ED 273 (344)
Q Consensus 197 ~~~~~i~~~p~~~~g~~~~~~~~g~vi~~~~g~~~i~~sGDt~~~~~~~~~~~~Dl~il~~~g~~~~~~~~h~~~---ee 273 (344)
+..+++..+||+|+. ...++.+ ++ .+++|+||..+.. .-.+. ...|.. ..++ .+
T Consensus 268 g~~l~vi~tPGHhTp-----g~i~~~~--p~--~~vLftGD~v~~~-~~~i~-------~~~g~~------~~d~~~~~~ 324 (658)
T 2cfu_A 268 GVPFTFQNTPGTESP-----AEMNIWL--PR--QKALLMAENVVGT-LHNLY-------TLRGAE------VRDALGWSK 324 (658)
T ss_dssp TEEEEEEECTTSSSS-----SBEEEEE--TT--TTEEECTTTSCSS-CCCSS-------CTTCCC------CCCHHHHHH
T ss_pred CEEEEEEeCCCCCCC-----CcEEEEE--CC--CCEEEEecccccc-CCccc-------cCCCcc------cCCHHHHHH
Confidence 224666777876421 1245554 32 4899999987642 10000 000110 0123 34
Q ss_pred HHHHHHHc---CCCEEEEeeeCCc
Q 019221 274 AVKLAKLL---HAKFIVPMKNGDL 294 (344)
Q Consensus 274 a~~~~~~l---~~k~vip~H~~~f 294 (344)
+++.++.+ +++.++|.|...+
T Consensus 325 sL~~l~~l~~l~~~~v~PGHg~p~ 348 (658)
T 2cfu_A 325 YINQALHRFGRQAEVMFAVHNWPR 348 (658)
T ss_dssp HHHHHHHHTGGGCSEEECSSSCCE
T ss_pred HHHHHHHHhCCCCcEEEeCCCCcc
Confidence 55555554 8999999998654
No 70
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.80 E-value=2.8e-08 Score=102.28 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=47.5
Q ss_pred CcEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCC-CCCCCccEEEecCCCCCCCChhhHHHhhhc----CC
Q 019221 86 GNSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQL-SDLPQVDCLLITQSLDDHCHLKTLKPLSKM----SP 160 (344)
Q Consensus 86 hss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~-~~lp~iD~VlISH~H~DHld~~tl~~L~~~----~p 160 (344)
-||++|+.++..|||||..+.... ++.+..+.- -...+|++|++||.|.|| ++.+..|.+. .+
T Consensus 133 ~N~~lI~~~~~~iLIDtG~~~~~a----------~~~l~~i~~~~~~~~I~~IilTH~H~DH--~gG~~~l~~~~~~~~~ 200 (668)
T 2yhe_A 133 ANMTIIEGDSGLVLIDTLTTAETA----------RAALDLYFQHRPKKPIVAVVYSHSHIDH--FGGARGIIDEADVKAG 200 (668)
Confidence 379999988889999995532111 001111110 012378999999999999 5777777652 24
Q ss_pred CceEEEccch
Q 019221 161 NLKVIATPNA 170 (344)
Q Consensus 161 ~~~v~~~~~~ 170 (344)
+++||+++..
T Consensus 201 ~a~I~a~~~~ 210 (668)
T 2yhe_A 201 KVKVFAPSGF 210 (668)
Confidence 7888887764
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.31 E-value=8.6e-06 Score=74.56 Aligned_cols=198 Identities=19% Similarity=0.148 Sum_probs=103.7
Q ss_pred cEEEEEeCCcEEEEccccCCCCCCCcccccccCCcccCCCCCCCCCCccEEEecCCCCCCCChhhHHHhhhcCCCceEEE
Q 019221 87 NSWLWDLDGVKVLVDPILVGNLDFGIPWLFDAGKKFLKSFQLSDLPQVDCLLITQSLDDHCHLKTLKPLSKMSPNLKVIA 166 (344)
Q Consensus 87 ss~li~~~g~~ILiDP~~~g~~s~p~~~~~~~~~~~~~~~~~~~lp~iD~VlISH~H~DHld~~tl~~L~~~~p~~~v~~ 166 (344)
.|++|+. |||||..+ . .+. +.+..+.++ +. |+|+|||.|+|| .+.+..| +++++|+
T Consensus 33 ~s~lie~----iLiD~G~~---~---~l~-----~~l~~~gi~--~~-~~IvlTH~H~DH--~ggl~~l----~~~~v~~ 88 (267)
T 3h3e_A 33 FSVLVDS----VLFDTGKS---D---VFL-----KNARKLGID--LP-KDVLISHGHYDH--AGGLLYL----SGKRVWL 88 (267)
T ss_dssp CEEEETT----EEECCCSS---S---HHH-----HHHHHTTCC--CC-SEEECSCSCHHH--HGGGGGC----CSCEEEE
T ss_pred eHHeeee----EEEECCCc---H---HHH-----HHHHHCCcC--cC-CEEEECCCChhh--hCCHHHh----cCCEEEE
Confidence 4788876 99999432 1 111 111111111 12 999999999999 6777777 3789999
Q ss_pred ccchHH--HHhh--c----------CCceEEeCCCceEEeCcccCCcEEEEEeecCCc------------CC---CCCCC
Q 019221 167 TPNAKT--LLDP--L----------FQNVTYVEPGQSSEIEGRNGSKLRVKATAGPVL------------GP---PWQRP 217 (344)
Q Consensus 167 ~~~~~~--~l~~--~----------~~~i~~l~~~~~~~~~~~~~~~~~i~~~p~~~~------------g~---~~~~~ 217 (344)
.+.... +... . ..+++..+ +..++. .++.+..-|-... |. ..-..
T Consensus 89 ~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~v~--~~~eI~----pgv~~~g~~r~~~~e~~~~~~~~~~g~~~~D~~~d 162 (267)
T 3h3e_A 89 RKEALDQKYSGERYAGADWNEVLYYNTGKFVIE--RITEIG----KNMFLLGPANLRGKVPTGDFFVERNGERRKDLFED 162 (267)
T ss_dssp EGGGGSEEEETTEECCCCHHHHHHHSEEEEECS--SEEEEE----TTEEEECSCCCTTCCCCSCEEEESSSCEEECCCTT
T ss_pred CHHHHHhhhccccccCCCccHHHhcCCcEEEeC--CCeEEc----CCcEEeCCCCCcccccCCCceEEeCCccccCCCCC
Confidence 876532 1110 0 11333333 223332 2555543211110 00 00012
Q ss_pred CCeEEEEeCCCceEEEEcCCCCCc--c---hhhcc-c-CccEEEEccccccCCCcccccCHHHHHHHHHHcCCCEEEEee
Q 019221 218 ENGYLVNSSQGQLTLYYEPHCVYN--Q---NFLEK-E-RSDIIITPVIKQLLPKFTLVSGQEDAVKLAKLLHAKFIVPMK 290 (344)
Q Consensus 218 ~~g~vi~~~~g~~~i~~sGDt~~~--~---~~~~~-~-~~Dl~il~~~g~~~~~~~~h~~~eea~~~~~~l~~k~vip~H 290 (344)
..+.++++++ .-+.++|-+--+ . ..++. + ++..+| ||-...... --..+++++.++.+++++++|+|
T Consensus 163 e~~Lvi~~~~--GlvvitGCsH~GI~Niv~~a~~~~g~~i~~vi---GGfHL~~~~-~~~l~~tl~~l~~~~~~~i~~~H 236 (267)
T 3h3e_A 163 EQTLVVRTKE--GLVVITGCSHRGIDNILLDIAETFNERIKMVV---GGFHLLKSS-DDEIEKIVKAFNELGVETVVPCH 236 (267)
T ss_dssp CCEEEEEETT--EEEEEESCCTTCHHHHHHHHHTTCSSCEEEEE---EECCCTTSC-HHHHHHHHHHHHHTTCCEEEEET
T ss_pred cEEEEEEcCC--cEEEEeCCCCcCHHHHHHHHHHHhCCCceEEE---eccccCCCC-HHHHHHHHHHHHhcCCCEEEEEC
Confidence 5677888775 477888865332 1 11222 2 232222 341111000 00247788889999999999999
Q ss_pred eCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEcC
Q 019221 291 NGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEIP 338 (344)
Q Consensus 291 ~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l~ 338 (344)
..-+. ..+.+++.- +.++.....|.+++++
T Consensus 237 CTg~~-----------------a~~~L~~~l-p~~v~~~~~G~~iei~ 266 (267)
T 3h3e_A 237 CTGER-----------------AVDIFKREF-LGKIMDCYAGLKLEVS 266 (267)
T ss_dssp TSCHH-----------------HHHHHHHHC-SSEECCCCTTCEEEEC
T ss_pred CCCHH-----------------HHHHHHHHC-CCCEEEecCceEEEeC
Confidence 86421 222233321 3466667789988874
No 72
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=80.29 E-value=2.2 Score=42.50 Aligned_cols=63 Identities=16% Similarity=0.142 Sum_probs=47.3
Q ss_pred CcccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCC-CeeeccCCCCeEEcCCC
Q 019221 264 KFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPD-AQLLEPTPGEPLEIPAP 340 (344)
Q Consensus 264 ~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~-~~~~~~~~Ge~~~l~~~ 340 (344)
.+..|.+.+|..++++.++||+++|+|... . ....+.+++++.+.+ .++.+|+.||.++|...
T Consensus 379 ~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~-~-------------~~~~~~~~~~~~g~~~~~~~~~~~G~~~~l~~~ 442 (562)
T 3bk2_A 379 HASGHASQEELKLILNLTTPRFFLPWHGEV-R-------------HQMNFKWLAESMSRPPEKTLIGENGAVYRLTRE 442 (562)
T ss_dssp CCCSSCCHHHHHHHHHHHCCSEEEEESBCH-H-------------HHHHHHHHHHTSSSCCSEECCCCTTEEEEECSS
T ss_pred EEeCCCCHHHHHHHHHhcCCCEEEEEcCCH-H-------------HHHHHHHHHHHcCCCcceEEECCCCCEEEEeCC
Confidence 345599999999999999999999999542 1 124555666665532 47899999999998743
No 73
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=75.99 E-value=2 Score=42.90 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=47.3
Q ss_pred CcccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCC-CeeeccCCCCeEEcCCC
Q 019221 264 KFTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPD-AQLLEPTPGEPLEIPAP 340 (344)
Q Consensus 264 ~~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~-~~~~~~~~Ge~~~l~~~ 340 (344)
++..|.+.+|-.+.++.++||+++|+|... .. ...+.++.++.|.+ .++++|+-||.+++.+.
T Consensus 364 h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~-~~-------------~~~~~~~a~~~G~~~~~~~~~~nG~~~~l~~~ 427 (555)
T 3zq4_A 364 HTSGHGGQEEQKLMLRLIKPKFFMPIHGEY-RM-------------QKMHVKLATDCGIPEENCFIMDNGEVLALKGD 427 (555)
T ss_dssp CCCSSCCHHHHHHHHHHSCEEEEEEESBCH-HH-------------HHHHHHHHHHTTCCGGGBCCCCTTCEEEEETT
T ss_pred EEeCCCCHHHHHHHHHHhCCCEEEEcCCCH-HH-------------HHHHHHHHHHcCCCcccEEEccCCCEEEEeCC
Confidence 344588999999999999999999999652 21 34555655665532 47889999999998643
No 74
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=74.04 E-value=2.4 Score=40.95 Aligned_cols=59 Identities=10% Similarity=0.223 Sum_probs=42.9
Q ss_pred ccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhc-C----CCCeeeccCCCCeEEcC
Q 019221 266 TLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKE-L----PDAQLLEPTPGEPLEIP 338 (344)
Q Consensus 266 ~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~-~----~~~~~~~~~~Ge~~~l~ 338 (344)
..|.+.++.++.++.++|+.++++|...-. .+.+++.+++. + .+.++.+|+.||+++|.
T Consensus 394 S~Had~~~l~~~i~~~~p~~v~~vHGe~~~--------------~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~ 457 (459)
T 2i7t_A 394 SAHTDYQQTSEFIRALKPPHVILVHGEQNE--------------MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLN 457 (459)
T ss_dssp SCCCCHHHHHHHHHHHCCSEEEEESSCHHH--------------HHHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEE
T ss_pred cccCCHHHHHHHHHhcCCCeEEEeCCCHHH--------------HHHHHHHHHHHhccccccCceEEeCCCCCEEEEE
Confidence 449999999999999999999999964311 23344444331 1 14789999999999873
No 75
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=68.11 E-value=7.6 Score=36.81 Aligned_cols=50 Identities=20% Similarity=0.268 Sum_probs=38.5
Q ss_pred ccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 266 TLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 266 ~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
..|.+.+|-.+.++.++||+++|+|...-. + .. ..+.++++|+.||.++|
T Consensus 380 SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~--------~--~~------------~~~~~~~~~~~g~~~~l 429 (429)
T 2az4_A 380 SGHAIPEDLDKIIALIEPQVLVPIHTLKPE--------K--LE------------NPYGERILPERGEQIVL 429 (429)
T ss_dssp CSSCCHHHHHHHHHHHCCSEEEEESCSCGG--------G--CC------------CTTSEECCCCTTCEEEC
T ss_pred cCCCCHHHHHHHHHhhCCCEEEECCCCchh--------h--hh------------cCCCcEEEeCCCcEEeC
Confidence 458899999999999999999999975322 1 11 12367888999999875
No 76
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=66.44 E-value=5.4 Score=40.51 Aligned_cols=58 Identities=5% Similarity=0.141 Sum_probs=43.8
Q ss_pred cccccCHHHHHHHHHHcC--CCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 265 FTLVSGQEDAVKLAKLLH--AKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 265 ~~~h~~~eea~~~~~~l~--~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
+..|.+.+|..+.++.++ |++++++|... . -.+.+.+.+++. .+.++.+|+.||.+++
T Consensus 591 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~-~-------------~~~~la~~~~~~-~g~~~~~p~~g~~~~l 650 (651)
T 3af5_A 591 FSGHADRRELMNYVAKVRPRPERIITVHGEP-Q-------------KCLDLATSIHRK-FGISTRAPNNLDTIRL 650 (651)
T ss_dssp GCSSCCHHHHHHHHHHCBSCCSEEEEESSCH-H-------------HHHHHHHHHHHH-HCCEEECCCTTCEEEC
T ss_pred ccCcCCHHHHHHHHHHhhcCCCEEEEEcCCH-H-------------HHHHHHHHHHHh-cCCeEEECCCCCEEEe
Confidence 345889999999999998 99999999542 1 135566666432 1368899999999986
No 77
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=64.74 E-value=5.2 Score=40.46 Aligned_cols=58 Identities=12% Similarity=0.115 Sum_probs=43.9
Q ss_pred cccccCHHHHHHHHHHcC--CCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 265 FTLVSGQEDAVKLAKLLH--AKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 265 ~~~h~~~eea~~~~~~l~--~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
+..|.+.+|..+.++.++ |++++|+|... . ..+.+.+.+++. .+.++.+|+.||.++|
T Consensus 576 ~SgHad~~eL~~~i~~~~~~Pk~vi~vHGe~-~-------------~~~~~a~~~~~~-~g~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 576 FSGHSDRRQLMEYVKRISPKPEKILLCHGDN-Y-------------KTLDLASSIYRT-YRIETKTPLNLETVRI 635 (636)
T ss_dssp CCSSCCHHHHHHHHHSCSSCCSEEEEESSCH-H-------------HHHHHHHHHHHH-HCCEEECCCTTCEEEC
T ss_pred cceeCCHHHHHHHHHHhccCCCEEEEECCCH-H-------------HHHHHHHHHHHH-cCCcEEeCCCCCEEEe
Confidence 445899999999999998 99999999542 1 135566666432 1368899999999986
No 78
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=62.14 E-value=6.1 Score=40.01 Aligned_cols=58 Identities=10% Similarity=0.118 Sum_probs=44.0
Q ss_pred cccccCHHHHHHHHHHcC--CCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 265 FTLVSGQEDAVKLAKLLH--AKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 265 ~~~h~~~eea~~~~~~l~--~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
+..|.+.+|..+.++.++ |++++++|... . -.+.+.+.+++. .+.++.+|+.||++.|
T Consensus 580 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~-~-------------~~~~~a~~~~~~-~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 580 FSGHSDRRQLMEYVKRMQPRPERVFTEHGDE-K-------------ACVDLASSVYKK-LKIETRALTNLETVRL 639 (640)
T ss_dssp CSCSCCHHHHHHHHHTCBSCCSEEEEESSCH-H-------------HHHHHHHHHHHH-HCCEEEECCTTCEEEC
T ss_pred ccccCCHHHHHHHHHHhccCCCEEEEECCCH-H-------------HHHHHHHHHHHH-cCCeEEeCCCCCEEEe
Confidence 345889999999999998 99999999542 1 135566666432 1368899999999986
No 79
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=41.60 E-value=29 Score=33.01 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=41.8
Q ss_pred cccccCHHHHHHHHHHcCCCEEEEeeeCCccCcccccccccccCCHHHHHHHHHhcCCCCeeeccCCCCeEEc
Q 019221 265 FTLVSGQEDAVKLAKLLHAKFIVPMKNGDLDSKGFLASIIQSEGTVESFKELLSKELPDAQLLEPTPGEPLEI 337 (344)
Q Consensus 265 ~~~h~~~eea~~~~~~l~~k~vip~H~~~f~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~Ge~~~l 337 (344)
+..|.+.+|.++.++.++ .++.+|...- ..+.|++.+++++. ++.+|..||++++
T Consensus 377 ~saHad~~~l~~~~~~~~--~v~lvHge~~--------------~~~~l~~~l~~~~~--~~~~p~~~~~~~~ 431 (431)
T 3iek_A 377 FSGHAGQDELLDWLQGEP--RVVLVHGEEE--------------KLLALGKLLALRGQ--EVSLARFGEGVPV 431 (431)
T ss_dssp GCSSCCHHHHHHHHTTCS--EEEEESSCHH--------------HHHHHHHHHHHTTC--EEEECCTTCCEEC
T ss_pred ccccCCHHHHHHHHHhCC--eEEEECCCHH--------------HHHHHHHHHHHhCC--cEEECCCCCEEeC
Confidence 345999999999998765 7999996531 24677777776653 8889999999875
No 80
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=40.66 E-value=15 Score=33.97 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=25.4
Q ss_pred ccCHHHHHHHHHHcCCCEEEEeeeCCcc
Q 019221 268 VSGQEDAVKLAKLLHAKFIVPMKNGDLD 295 (344)
Q Consensus 268 h~~~eea~~~~~~l~~k~vip~H~~~f~ 295 (344)
|.+.+|..+.++.++|+.++|+|.|.+.
T Consensus 277 Ha~~~EL~~~~~~~~P~~~iPvh~ge~~ 304 (336)
T 3zdk_A 277 HSSYSELRAFVAALKPCQVVPIVSRRPC 304 (336)
T ss_dssp SCBHHHHHHHHHHHCCSCEEESCTTSCC
T ss_pred CCCHHHHHHHHHHhCCCEEEEEECCcCc
Confidence 8899999999999999999999966654
No 81
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=21.54 E-value=56 Score=30.39 Aligned_cols=27 Identities=19% Similarity=0.208 Sum_probs=24.7
Q ss_pred ccccCHHHHHHHHHHcCCCEEEEeeeC
Q 019221 266 TLVSGQEDAVKLAKLLHAKFIVPMKNG 292 (344)
Q Consensus 266 ~~h~~~eea~~~~~~l~~k~vip~H~~ 292 (344)
.-|.+..|..++++.++|+.+||+|..
T Consensus 319 SeHss~~EL~~fv~~l~p~~iiptv~~ 345 (367)
T 4b87_A 319 SEHSSYLEMKRFVQWLKPQKIIPTVNV 345 (367)
T ss_dssp CSSCCHHHHHHHHHHHCCSEEEECSSC
T ss_pred cCCCCHHHHHHHHHhcCCCeEECeecC
Confidence 348899999999999999999999974
No 82
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.64 E-value=30 Score=26.53 Aligned_cols=19 Identities=16% Similarity=0.100 Sum_probs=13.8
Q ss_pred EEEecCCCCCCCChhhHHHhh
Q 019221 136 CLLITQSLDDHCHLKTLKPLS 156 (344)
Q Consensus 136 ~VlISH~H~DHld~~tl~~L~ 156 (344)
-|||||.+-| ++..|..+.
T Consensus 6 ~lFISh~~~d--~~~~L~~~l 24 (111)
T 1eiw_A 6 RLYITEGEVE--DYRVFLERL 24 (111)
T ss_dssp EEEECCCCSH--HHHHHHHHH
T ss_pred EEEEecccHh--HHHHHHHHH
Confidence 3899999998 466655444
No 83
>3kf6_B Protein TEN1; OB fold, chromosomal protein, DNA-binding, nucleus, telomere; 1.65A {Schizosaccharomyces pombe} PDB: 3k0x_A
Probab=20.06 E-value=2.2e+02 Score=21.46 Aligned_cols=27 Identities=22% Similarity=0.081 Sum_probs=17.9
Q ss_pred CCceEEEEEe------CcEEEEEeCCcEEEEcc
Q 019221 76 TDVFKLTYLE------GNSWLWDLDGVKVLVDP 102 (344)
Q Consensus 76 ~~~~~it~lG------hss~li~~~g~~ILiDP 102 (344)
+.+.++.||| .++..++..+.++.+|=
T Consensus 19 ~~G~KVRFLGCV~sY~tg~L~Le~~~~~v~VDV 51 (105)
T 3kf6_B 19 KDGQKLRFLGCVQSYKNGILRLIDGSSSVTCDV 51 (105)
T ss_dssp CTTCEEEEEEEEEEEETTEEEEEETTEEEEEEC
T ss_pred CCCCEEEEEEEeeeeccEEEEEccCCcEEEEEH
Confidence 4567899999 34556665566666665
Done!